Your job contains 1 sequence.
>psy15473
MFRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR
TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG
RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY
GGEKMSPGAQ
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15473
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 406 8.6e-42 2
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 355 2.4e-35 2
UNIPROTKB|F1MD77 - symbol:LAMC1 "Uncharacterized protein"... 292 1.1e-30 2
UNIPROTKB|F1PHK9 - symbol:LAMC1 "Uncharacterized protein"... 288 2.4e-30 2
UNIPROTKB|F1S663 - symbol:LAMC1 "Uncharacterized protein"... 286 4.7e-30 2
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 281 1.6e-29 2
UNIPROTKB|P11047 - symbol:LAMC1 "Laminin subunit gamma-1"... 279 2.6e-29 2
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 281 5.3e-29 2
UNIPROTKB|F1NI05 - symbol:LAMC1 "Uncharacterized protein"... 283 1.2e-28 2
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 254 2.6e-28 2
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 250 4.4e-28 2
UNIPROTKB|F1NK49 - symbol:LAMC1 "Uncharacterized protein"... 283 4.7e-28 2
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 247 1.4e-27 2
UNIPROTKB|Q9Y6N6 - symbol:LAMC3 "Laminin subunit gamma-3"... 269 5.1e-27 2
ZFIN|ZDB-GENE-021226-3 - symbol:lamc1 "laminin, gamma 1" ... 264 6.7e-27 2
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 264 8.4e-27 2
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 229 1.5e-26 2
UNIPROTKB|F1PEZ5 - symbol:LAMA2 "Uncharacterized protein"... 238 1.6e-26 2
UNIPROTKB|F1PVY5 - symbol:LAMA2 "Uncharacterized protein"... 238 1.6e-26 2
UNIPROTKB|F1NCH8 - symbol:F1NCH8 "Uncharacterized protein... 276 2.1e-26 2
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 225 6.6e-26 2
MGI|MGI:99912 - symbol:Lama2 "laminin, alpha 2" species:1... 232 6.9e-26 2
RGD|1308889 - symbol:Lama2 "laminin, alpha 2" species:101... 232 8.7e-26 2
MGI|MGI:1344394 - symbol:Lamc3 "laminin gamma 3" species:... 268 3.1e-25 2
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 268 3.9e-25 2
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 224 6.1e-25 2
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 249 9.0e-25 2
UNIPROTKB|F1N0T1 - symbol:Bt.54919 "Uncharacterized prote... 256 1.7e-24 2
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 244 7.7e-24 2
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 223 1.4e-23 2
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 245 5.7e-23 2
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 252 1.1e-22 2
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 224 1.1e-22 2
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 232 1.4e-22 3
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 245 2.5e-22 2
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 239 2.5e-22 2
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 241 3.6e-22 2
FB|FBgn0261563 - symbol:wb "wing blister" species:7227 "D... 247 6.3e-22 3
UNIPROTKB|F1MNT4 - symbol:LAMB1 "Uncharacterized protein"... 238 6.3e-22 2
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 238 1.0e-21 2
UNIPROTKB|F1NJ23 - symbol:LAMB1 "Laminin subunit beta-1" ... 217 1.1e-21 2
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 229 1.2e-21 2
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 217 1.2e-21 2
UNIPROTKB|P07942 - symbol:LAMB1 "Laminin subunit beta-1" ... 215 1.6e-21 2
RGD|1306311 - symbol:Lamb1 "laminin, beta 1" species:1011... 213 2.8e-21 2
UNIPROTKB|P55268 - symbol:LAMB2 "Laminin subunit beta-2" ... 206 5.6e-21 2
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 230 8.8e-21 2
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 230 8.8e-21 2
MGI|MGI:96743 - symbol:Lamb1 "laminin B1" species:10090 "... 207 1.1e-20 2
UNIPROTKB|E5RFQ2 - symbol:LAMA4 "Laminin subunit alpha-4"... 187 1.9e-20 2
MGI|MGI:109321 - symbol:Lama4 "laminin, alpha 4" species:... 172 3.3e-20 2
RGD|2988 - symbol:Lamb2 "laminin, beta 2" species:10116 "... 206 3.8e-20 2
UNIPROTKB|E2R4J1 - symbol:LAMB2 "Uncharacterized protein"... 206 3.9e-20 2
UNIPROTKB|F1SPT5 - symbol:LAMB2 "Uncharacterized protein"... 205 3.9e-20 2
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 233 1.7e-19 2
UNIPROTKB|E1C700 - symbol:LAMB2 "Uncharacterized protein"... 220 1.9e-19 2
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 229 2.4e-19 2
WB|WBGene00006787 - symbol:unc-52 species:6239 "Caenorhab... 249 2.8e-19 1
UNIPROTKB|Q06561 - symbol:unc-52 "Basement membrane prote... 249 2.8e-19 1
MGI|MGI:105382 - symbol:Lama5 "laminin, alpha 5" species:... 235 3.1e-19 2
UNIPROTKB|E1BDK6 - symbol:LAMB2 "Uncharacterized protein"... 198 3.4e-19 2
UNIPROTKB|Q6VU69 - symbol:LAMA3 "Laminin subunit alpha-3"... 244 4.1e-19 1
MGI|MGI:99916 - symbol:Lamb2 "laminin, beta 2" species:10... 198 4.3e-19 2
UNIPROTKB|B0YJ33 - symbol:LAMA3 "Laminin subunit alpha-3"... 244 4.3e-19 1
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 202 4.9e-19 2
FB|FBgn0261800 - symbol:LanB1 "LanB1" species:7227 "Droso... 220 7.0e-19 2
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 199 7.7e-19 2
ZFIN|ZDB-GENE-060119-1 - symbol:lama2 "laminin, alpha 2" ... 244 8.6e-19 1
UNIPROTKB|E9PTR0 - symbol:E9PTR0 "Uncharacterized protein... 239 1.4e-18 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 219 1.7e-18 2
ZFIN|ZDB-GENE-080807-4 - symbol:hspg2 "heparan sulfate pr... 222 2.1e-18 3
UNIPROTKB|Q16363 - symbol:LAMA4 "Laminin subunit alpha-4"... 187 2.6e-18 2
MGI|MGI:1918264 - symbol:Megf9 "multiple EGF-like-domains... 186 2.8e-18 2
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 222 3.3e-18 2
MGI|MGI:96257 - symbol:Hspg2 "perlecan (heparan sulfate p... 218 4.3e-18 2
UNIPROTKB|A4D0S4 - symbol:LAMB4 "Laminin subunit beta-4" ... 180 4.6e-18 2
RGD|628776 - symbol:Lama3 "laminin, alpha 3" species:1011... 234 5.0e-18 1
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 179 7.0e-18 2
FB|FBgn0261451 - symbol:trol "terribly reduced optic lobe... 192 1.1e-17 2
UNIPROTKB|Q9H1U4 - symbol:MEGF9 "Multiple epidermal growt... 175 1.3e-17 2
ZFIN|ZDB-GENE-021226-2 - symbol:lamb4 "laminin, beta 4" s... 161 2.2e-17 2
UNIPROTKB|F1MYX9 - symbol:LAMA4 "Uncharacterized protein"... 228 2.3e-17 1
ZFIN|ZDB-GENE-040724-213 - symbol:lama4 "laminin, alpha 4... 180 7.4e-17 2
UNIPROTKB|F1PR66 - symbol:LAMA4 "Uncharacterized protein"... 222 9.6e-17 1
UNIPROTKB|I3LV27 - symbol:LAMA3 "Uncharacterized protein"... 220 1.5e-16 1
UNIPROTKB|F1SBB3 - symbol:LAMA3 "Uncharacterized protein"... 220 1.5e-16 1
UNIPROTKB|P98160 - symbol:HSPG2 "Basement membrane-specif... 216 2.8e-16 2
UNIPROTKB|E1BXK1 - symbol:LAMC2 "Uncharacterized protein"... 165 2.9e-16 2
UNIPROTKB|F1MER7 - symbol:HSPG2 "Uncharacterized protein"... 208 3.6e-16 2
WB|WBGene00002247 - symbol:lam-1 species:6239 "Caenorhabd... 212 1.1e-15 1
UNIPROTKB|F1NSZ5 - symbol:LAMA4 "Uncharacterized protein"... 207 3.8e-15 1
ZFIN|ZDB-GENE-050208-475 - symbol:lama3 "laminin, alpha 3... 204 7.5e-15 1
UNIPROTKB|Q13753 - symbol:LAMC2 "Laminin subunit gamma-2"... 179 1.4e-14 2
ZFIN|ZDB-GENE-050310-1 - symbol:ntn4 "netrin 4" species:7... 195 1.6e-14 1
ZFIN|ZDB-GENE-030131-230 - symbol:si:ch211-241e1.3 "si:ch... 197 3.2e-14 1
MGI|MGI:1341628 - symbol:Atrn "attractin" species:10090 "... 156 4.4e-14 3
UNIPROTKB|Q8MJ16 - symbol:ATRN "Uncharacterized protein" ... 156 6.9e-14 3
UNIPROTKB|F1S8B6 - symbol:ATRN "Uncharacterized protein" ... 156 6.9e-14 3
UNIPROTKB|O75882 - symbol:ATRN "Attractin" species:9606 "... 155 7.1e-14 3
UNIPROTKB|E1B7Q3 - symbol:LAMC2 "Uncharacterized protein"... 190 1.1e-13 2
WARNING: Descriptions of 377 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 406 (148.0 bits), Expect = 8.6e-42, Sum P(2) = 8.6e-42
Identities = 60/96 (62%), Positives = 78/96 (81%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY H P GG F C+PC+C+GHADICD+E+GRCICQ NT GDNC++CA+G+YGNAL G
Sbjct: 727 GYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQCAKGFYGNALGGT 786
Query: 149 VTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
DCK+CPCPN G C+Q+++D V+C+ECP+GY G +
Sbjct: 787 PNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSR 822
Score = 302 (111.4 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 63/180 (35%), Positives = 93/180 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RCICQ NT GDNC++CA+G+YGNAL G DCK+CPCPN G C+Q+++D V
Sbjct: 759 RCICQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTV------ICT 812
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCNGHADI-----CDA 117
G+R + G+ +PT G C C+CNG+ D C+
Sbjct: 813 ECPKGYFGSRCEQCS---------DGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNR 863
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV-CSE 175
+G C+ C NT G++C++C G++G+ L C +C C G + D+ + C +
Sbjct: 864 TTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAG--TEQDEQSITRCDQ 921
Score = 167 (63.8 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 48/179 (26%), Positives = 77/179 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C NT G++C++C G++G+ L C +C C G + D+ ++
Sbjct: 868 CLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAG--TEQDEQSIT-------- 917
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADICDAESGRC 122
R G + + + R GY + SG C+ C+ G + CD SG+C
Sbjct: 918 RCDQVTGQCQCKPNVIGRDCGECQPGYFNI-RSGNGCENCL-CDPVGSYNSTCDRYSGQC 975
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDD-QVVCSECPRG 179
C+ G C++C +YG + EG CK C C G Q D + Q C++ G
Sbjct: 976 HCRPGVMGQRCDQCENYFYGFSSEG----CKPCECDESGSKGFQCDQNGQCPCNDNVEG 1030
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 32/94 (34%), Positives = 41/94 (43%)
Query: 101 SRCVPCNCNGHADIC--DAE-------SGRCI-CQDNTGGDNCERCARGYYGNALEGAVT 150
+ C CNCNG AD C DA G C+ C++N G NCERC +Y +G
Sbjct: 354 NECKACNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRD-DGY-- 410
Query: 151 DCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C C C G + C +C G G+K
Sbjct: 411 -CVNCACDPVGSRSLQCNSHGKC-QCKPGVTGDK 442
Score = 108 (43.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/94 (29%), Positives = 39/94 (41%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
CV C C+ G + C++ G+C C+ GD C+RC YY G C+QC C +
Sbjct: 411 CVNCACDPVGSRSLQCNSH-GKCQCKPGVTGDKCDRCDNNYYQFGPHG----CQQCGCDS 465
Query: 160 QG-----PCVQLDDDQVVCSECPRGYGGEKMSPG 188
G P + C E G + PG
Sbjct: 466 GGSHQNTPACDTETGICFCKENVEGRRCNECKPG 499
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C PC C+ G CD ++G+C C DN G C+RC Y G + DC C
Sbjct: 1001 CKPCECDESGSKGFQCD-QNGQCPCNDNVEGRRCDRCKENKYDRH-RGCI-DCPDC 1053
Score = 94 (38.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 103 CVPCNCNG---HADI--CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C C C+ H + CD E+G C C++N G C C G++ N + C C C
Sbjct: 458 CQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFF-NLDKNNRFGCTPCFC 516
Score = 82 (33.9 bits), Expect = 8.6e-42, Sum P(2) = 8.6e-42
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ GD C+RC YY G C+QC C + G
Sbjct: 431 KCQCKPGVTGDKCDRCDNNYYQFGPHG----CQQCGCDSGG 467
Score = 77 (32.2 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 121 RCICQDNTGGDNCERCARGY-YGNALEGAVTDCKQCPCPNQ--------GPCV-QLDDDQ 170
+C C + G CE CA GY + A G C C C G C+ Q +
Sbjct: 709 QCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHG 768
Query: 171 VVCSECPRGYGGEKM 185
C +C +G+ G +
Sbjct: 769 DNCDQCAKGFYGNAL 783
Score = 76 (31.8 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +C+RC Y + + V +CK C C D +NL NR
Sbjct: 322 CECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFD----ANLFNR 377
Query: 61 T 61
T
Sbjct: 378 T 378
Score = 70 (29.7 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C+ C++N G NCERC +Y +G C C C G
Sbjct: 384 CLDCRENRDGPNCERCKENFYMRD-DGY---CVNCACDPVG 420
Score = 68 (29.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 4 RCICQDNTGGDNCERCARGY-YGNALEGAVTDCKQCPC 40
+C C + G CE CA GY + A G C C C
Sbjct: 709 QCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDC 746
Score = 66 (28.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G +C C GY+ N G C+ C C G
Sbjct: 925 QCQCKPNVIGRDCGECQPGYF-NIRSG--NGCENCLCDPVG 962
Score = 62 (26.9 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C++N G C C G++ N + C C C
Sbjct: 482 CFCKENVEGRRCNECKPGFF-NLDKNNRFGCTPCFC 516
Score = 51 (23.0 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 103 CVPCNCNGHADICDAESGRCI 123
C PC C GH C G I
Sbjct: 511 CTPCFCYGHTSECMTAPGYSI 531
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 355 (130.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 53/97 (54%), Positives = 71/97 (73%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+G+ E GG F+ C+ C+C+ H++ C+AESG CIC+ NT GD CERCARGYYG+AL+G
Sbjct: 718 SGFRRETKFGGPFNHCIKCDCHNHSNSCEAESGSCICEHNTAGDTCERCARGYYGDALQG 777
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
DC++CPCPN GPC+ D V+C+ECP GY G +
Sbjct: 778 TEEDCQKCPCPNDGPCILHADGDVICTECPNGYTGRR 814
Score = 272 (100.8 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 62/157 (39%), Positives = 78/157 (49%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
CIC+ NT GD CERCARGYYG+AL+G DC++CPCPN GPC+ L D G+
Sbjct: 752 CICEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPCI-LHAD-----GDVICTE 805
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESGR 121
+ G R + GY P G C C+ N + CD +G
Sbjct: 806 CPNGYTGRRCDECS---------DGYFGNPKDGTECVECA-CSGNTDPNSIGNCDKITGE 855
Query: 122 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C C NT G NCE C GY+G+AL +C+ C C
Sbjct: 856 CKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGC 892
Score = 136 (52.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 50/194 (25%), Positives = 74/194 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C C+ NT G +C C Y G + +C N C QL + + ++
Sbjct: 310 CRCEHNTQGADCNECLPFYNDRPWRSGTSVEANECIACN---CSQLSNRCYFD----QQL 362
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
++ GG+ T+ H + +H G + CV C CN + CD E G
Sbjct: 363 FEETGHGGHCIDCQGNTQGVHCEQCIANHWRRPGENY--CVACGCNEIGSLSTQCDNE-G 419
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC---VQLDDDQVVCSECP 177
+C C+ G C++C G+Y + G CK C C G + D CS C
Sbjct: 420 KCQCKPGVTGRFCDQCLDGFYDFSTNG----CKNCGCETSGSLNNQPRCDSSSGSCS-CK 474
Query: 178 RGYGG---EKMSPG 188
G +K PG
Sbjct: 475 LNVEGRQCDKCKPG 488
Score = 118 (46.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCP 158
C CNC+ + CD +G+C C+ G C+RCA ++G + G DC+
Sbjct: 943 CQECNCDPLGSEGNTCDVNTGQCQCKPGVTGQRCDRCADYHFGFSANGCQPCDCEYIGSE 1002
Query: 159 NQGPCVQLDDDQVVCSECPRG 179
NQ C ++ Q +C E G
Sbjct: 1003 NQ-QC-DVNSGQCLCKENVEG 1021
Score = 115 (45.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 79 LTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADI-CDAESGRCICQDNTGGDNCER 135
+T Q + YH ++ G C PC+C G + CD SG+C+C++N G C++
Sbjct: 971 VTGQRCDRCADYHFGFSANG----CQPCDCEYIGSENQQCDVNSGQCLCKENVEGRRCDQ 1026
Query: 136 CARGYYGNALEGAVTDCKQC 155
CA YG +G + C C
Sbjct: 1027 CAENRYG-ITQGCLP-CDDC 1044
Score = 99 (39.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-P--NQGPCVQLDDDQV 171
C+ + G+C C N G C++CA G+Y N G C++C C P ++G ++ Q
Sbjct: 909 CNQQDGQCDCLPNVIGIQCDQCAHGFY-NITSGL--GCQECNCDPLGSEGNTCDVNTGQ- 964
Query: 172 VCSECPRGYGGEK 184
C +C G G++
Sbjct: 965 -C-QCKPGVTGQR 975
Score = 74 (31.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/117 (27%), Positives = 42/117 (35%)
Query: 9 DNTGGDNCERCARGYY-GNALEG----AVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
DN G C+ G + L+G + CK C C G +L N+ R
Sbjct: 416 DNEGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSG-----------SLNNQPRC 464
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
S+ G + RQ GY T F C PC C GH+ IC+ G
Sbjct: 465 --DSSSGSCSCKLNVEGRQCDKCKPGYFDLSTEN-QFG-CTPCFCFGHSSICNTADG 517
Score = 72 (30.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C++C G+Y + G CK C C G
Sbjct: 420 KCQCKPGVTGRFCDQCLDGFYDFSTNG----CKNCGCETSG 456
Score = 66 (28.3 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ N G C++C GY+ + E C C C
Sbjct: 471 CSCKLNVEGRQCDKCKPGYFDLSTENQF-GCTPCFC 505
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 292 (107.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 49/99 (49%), Positives = 62/99 (62%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
L+GY E S G +S CV C CNGH++ CD ESG C C+DNT G NCE+C+ GYYG++
Sbjct: 704 LSGYRRETPSLGPYSPCVLCTCNGHSETCDPESGVCNCRDNTAGPNCEKCSDGYYGDSTA 763
Query: 147 GAVTDCKQCPCPNQGPCVQLDDDQ-VVCSECPRGYGGEK 184
G DC+ CPCP C + Q VVC+ CP G G +
Sbjct: 764 GTSLDCQPCPCPGGSSCAVVPKTQEVVCTNCPTGTTGRR 802
Score = 237 (88.5 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 58/180 (32%), Positives = 78/180 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+DNT G NCE+C+ GYYG++ G DC+ CPCP C + Q +
Sbjct: 739 CNCRDNTAGPNCEKCSDGYYGDSTAGTSLDCQPCPCPGGSSCAVVPKTQ--------EVV 790
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPT-SGGAFSRCVPCNCNGHADI-----CDAE 118
+ G R L H+ G +P S G C C CN + D C+
Sbjct: 791 CTNCPTGTTGRRCELCDDGHF---G---DPLGSNGPVRLCRLCQCNDNIDPNAVGNCNRL 844
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSEC 176
+G C+ C NT G C+RC G++GN L D C+ C C G Q V +C
Sbjct: 845 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPYGTVKQQSSCNPVTGQC 904
Score = 156 (60.0 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 46/194 (23%), Positives = 79/194 (40%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +CE+C + + A + ++C+ C C + D + + G+
Sbjct: 304 CNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECQPCDCNGRSQECYFDPELYRSTGHG 363
Query: 61 TRI-RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CD 116
+ G + R+ ++L G C PC+C+ + CD
Sbjct: 364 GHCTNCQDNTDGAKCERC---RENFFRL----------GNREACSPCHCSPVGSLSTQCD 410
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVVCS 174
+ GRC C+ GD C+RC GY+ G C+ C C G + ++ + VC
Sbjct: 411 SY-GRCSCKPGVMGDKCDRCQPGYHSLTEAG----CRPCSCNPSGSIDECNIETGRCVCK 465
Query: 175 ECPRGYGGEKMSPG 188
+ G+ E+ PG
Sbjct: 466 DNVEGFNCERCKPG 479
Score = 151 (58.2 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
GYH +G C PC+CN G D C+ E+GRC+C+DN G NCERC G++ N
Sbjct: 432 GYHSLTEAG-----CRPCSCNPSGSIDECNIETGRCVCKDNVEGFNCERCKPGFF-NLES 485
Query: 147 GAVTDCKQCPC 157
C C C
Sbjct: 486 SNPRGCTPCFC 496
Score = 131 (51.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 33/91 (36%), Positives = 43/91 (47%)
Query: 96 SGGAFSRCVPCNCNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG RC C+ G + CD SG+C CQ G +CE C ++G EG CK
Sbjct: 927 SGQGCERC-DCHALGSTNGQCDVHSGQCECQPGITGQHCEHCEVNHFGFGPEG----CKP 981
Query: 155 CPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
C C +G +Q DD C EC G+ G +
Sbjct: 982 CDCHPEGSLSLQCKDDGR-C-ECREGFVGNR 1010
Score = 91 (37.1 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC+C+DN G NCERC G++ N C C C
Sbjct: 461 RCVCKDNVEGFNCERCKPGFF-NLESSNPRGCTPCFC 496
Score = 81 (33.6 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+ RC C+ GD C+RC GY+ G C+ C C G
Sbjct: 412 YGRCSCKPGVMGDKCDRCQPGYHSLTEAG----CRPCSCNPSG 450
Score = 75 (31.5 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 22/72 (30%), Positives = 26/72 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPCVQLDDDQVV 172
C C GG CE C GY G + C C C P G C D+
Sbjct: 689 CTCPVGYGGQFCEVCLSGYRRETPSLGPYSPCVLCTCNGHSETCDPESGVCNCRDNTAGP 748
Query: 173 -CSECPRGYGGE 183
C +C GY G+
Sbjct: 749 NCEKCSDGYYGD 760
Score = 59 (25.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + G +C C G+Y N G C++C C
Sbjct: 903 QCECLPHVTGRDCGACDPGFY-NLQSGQ--GCERCDC 936
Score = 55 (24.4 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 103 CVPCNCNGHADIC 115
C PC C GH+ +C
Sbjct: 491 CTPCFCFGHSSVC 503
Score = 43 (20.2 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G +RC + A V C P + CVQ
Sbjct: 39 CTDE--GGRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQ 78
Score = 38 (18.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CK 36
R C C DN + NC R C + Y A G D CK
Sbjct: 825 RLCQCNDNIDPNAVGNCNRLTGECLKCIYNTA--GFYCDRCK 864
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 288 (106.4 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 47/99 (47%), Positives = 65/99 (65%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
L+GY E S G +S CV C CNGH++ CD E+G C C+DNT G +CE+C+ GYYG++
Sbjct: 583 LSGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGPHCEKCSDGYYGDSTT 642
Query: 147 GAVTDCKQCPCPNQGPCVQLDDDQ-VVCSECPRGYGGEK 184
G+ +DC+ CPCP C + Q VVC+ CP G G++
Sbjct: 643 GSSSDCQPCPCPGGSSCAVVPKTQEVVCTNCPTGTTGKR 681
Score = 230 (86.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 57/180 (31%), Positives = 78/180 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+DNT G +CE+C+ GYYG++ G+ +DC+ CPCP C + Q N
Sbjct: 618 CDCRDNTAGPHCEKCSDGYYGDSTTGSSSDCQPCPCPGGSSCAVVPKTQEVVCTN----- 672
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDAE 118
+ G R L GY +P G C C CN + D C+
Sbjct: 673 CPTGTTGKRCE---LCDD------GYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRL 723
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSEC 176
+G C+ C NT G C+RC G++GN L D C+ C C G Q V +C
Sbjct: 724 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSSCNPVTGQC 783
Score = 159 (61.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 46/193 (23%), Positives = 78/193 (40%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +CE+C + + A + ++C C C + D + + G+
Sbjct: 183 CNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHG 242
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDA 117
+ G R+ ++L HE C PC+C+ + CD+
Sbjct: 243 GHCT--NCQGNTDGANCERCRENFFRLVS--HEA--------CSPCHCSPVGSLSTQCDS 290
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVVCSE 175
GRC C+ G+ C+RC GY+ G C+ C C G + ++ + VC +
Sbjct: 291 Y-GRCSCKPGVMGEKCDRCQPGYHSLTEAG----CRPCSCNPAGSIDECNVETGRCVCKD 345
Query: 176 CPRGYGGEKMSPG 188
G+ E+ PG
Sbjct: 346 NVEGFNCERCKPG 358
Score = 152 (58.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
GYH +G C PC+CN G D C+ E+GRC+C+DN G NCERC G++ N
Sbjct: 311 GYHSLTEAG-----CRPCSCNPAGSIDECNVETGRCVCKDNVEGFNCERCKPGFF-NLES 364
Query: 147 GAVTDCKQCPC 157
C C C
Sbjct: 365 SNPRGCTPCFC 375
Score = 129 (50.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 32/91 (35%), Positives = 44/91 (48%)
Query: 96 SGGAFSRCVPCNCNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG RC C+ G + CD +G+C CQ G +CE C ++G EG CK
Sbjct: 806 SGQGCERC-DCHALGSTNGQCDIRTGQCECQPGITGQHCEHCEVNHFGFGPEG----CKP 860
Query: 155 CPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
C C +G +Q DD C EC +G+ G +
Sbjct: 861 CDCHPEGSVSLQCKDDGR-C-ECKQGFVGNR 889
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 47/172 (27%), Positives = 67/172 (38%)
Query: 14 DNCERCARGYYGNALEGAVTD--CKQCPC-PN-QGPCVQLDDDQVSNL--GNRTRIRIKS 67
D C CA YG + + + QC C P+ G D NL G
Sbjct: 757 DKCRACACNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCH 816
Query: 68 ALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCNCN--GHADICDAES 119
ALG + T Q Q +TG H E F C PC+C+ G + +
Sbjct: 817 ALGSTNGQCDIRTGQCECQPGITGQHCEHCEVNHFGFGPEGCKPCDCHPEGSVSLQCKDD 876
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
GRC C+ G+ C++C Y+ N + C++CP C +L D+V
Sbjct: 877 GRCECKQGFVGNRCDQCEENYFYNR---SWPGCQECPA-----CYRLVKDKV 920
Score = 91 (37.1 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC+C+DN G NCERC G++ N C C C
Sbjct: 340 RCVCKDNVEGFNCERCKPGFF-NLESSNPRGCTPCFC 375
Score = 77 (32.2 bits), Expect = 6.9e-29, Sum P(2) = 6.9e-29
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 54
+ RC C+ G+ C+RC GY+ G C+ C C P +D+ V
Sbjct: 291 YGRCSCKPGVMGEKCDRCQPGYHSLTEAG----CRPCSC---NPAGSIDECNV 336
Score = 76 (31.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 22/72 (30%), Positives = 26/72 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPCVQLDDDQVV 172
C C GG CE C GY G + C C C P G C D+
Sbjct: 568 CTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGP 627
Query: 173 -CSECPRGYGGE 183
C +C GY G+
Sbjct: 628 HCEKCSDGYYGD 639
Score = 63 (27.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 13/37 (35%), Positives = 14/37 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC 40
C C GG CE C GY G + C C C
Sbjct: 568 CTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTC 604
Score = 59 (25.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + G +C C G+Y N G C++C C
Sbjct: 782 QCECLPHVTGRDCGACDPGFY-NLQSGQ--GCERCDC 815
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 103 CVPCNCNGHADIC 115
C PC C GH+ +C
Sbjct: 370 CTPCFCFGHSSVC 382
Score = 38 (18.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CK 36
R C C DN + NC R C + Y A G D CK
Sbjct: 704 RLCQCNDNIDPNAVGNCNRLTGECLKCIYNTA--GFYCDRCK 743
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 286 (105.7 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 47/99 (47%), Positives = 64/99 (64%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
L+GY E S G +S CV C CNGH++ CD E+G C C+DNT G +CE+C+ GYYG++
Sbjct: 704 LSGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTV 763
Query: 147 GAVTDCKQCPCPNQGPCVQLDDDQ-VVCSECPRGYGGEK 184
G +DC+ CPCP C + Q VVC+ CP G G++
Sbjct: 764 GTSSDCQPCPCPGGSSCAVVPKTQEVVCTNCPTGTTGKR 802
Score = 231 (86.4 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 58/180 (32%), Positives = 77/180 (42%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+DNT G +CE+C+ GYYG++ G +DC+ CPCP C + Q N
Sbjct: 739 CNCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPCPCPGGSSCAVVPKTQEVVCTN----- 793
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDAE 118
+ G R L GY +P G C C CN + D C+
Sbjct: 794 CPTGTTGKRCE---LCDD------GYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRL 844
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSEC 176
+G C+ C NT G C+RC G++GN L D CK C C G Q V +C
Sbjct: 845 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQC 904
Score = 156 (60.0 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 49/196 (25%), Positives = 82/196 (41%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +CE+C + + A + ++C C C + D + + G+
Sbjct: 304 CNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHG 363
Query: 61 ---TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--- 114
T + + G N R R+ +++L G C PC+C+ +
Sbjct: 364 GHCTNCQDNTD-GPNCER----CRENYFRL----------GNREACSPCHCSPVGSLSTQ 408
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVV 172
CD+ GRC C+ GD C+RC GY+ G C+ C C G + ++ + V
Sbjct: 409 CDSY-GRCSCKPGVMGDKCDRCQPGYHSLTEAG----CRPCSCNPSGSTDECNVETGRCV 463
Query: 173 CSECPRGYGGEKMSPG 188
C + G+ E+ PG
Sbjct: 464 CKDNVEGFNCERCKPG 479
Score = 153 (58.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 30/71 (42%), Positives = 38/71 (53%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
GYH +G C PC+CN G D C+ E+GRC+C+DN G NCERC G++ N
Sbjct: 432 GYHSLTEAG-----CRPCSCNPSGSTDECNVETGRCVCKDNVEGFNCERCKPGFF-NLES 485
Query: 147 GAVTDCKQCPC 157
C C C
Sbjct: 486 SNPRGCTPCFC 496
Score = 133 (51.9 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 33/91 (36%), Positives = 44/91 (48%)
Query: 96 SGGAFSRCVPCNCNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG RC C+ G + CD +G+C CQ G +CERC ++G EG CK
Sbjct: 927 SGQGCKRC-ECHALGSTNGQCDVHTGQCECQPGITGQHCERCEVNHFGFGPEG----CKP 981
Query: 155 CPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
C C +G +Q DD C EC G+ G +
Sbjct: 982 CDCHPEGALSLQCKDDGR-C-ECREGFVGNR 1010
Score = 91 (37.1 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC+C+DN G NCERC G++ N C C C
Sbjct: 461 RCVCKDNVEGFNCERCKPGFF-NLESSNPRGCTPCFC 496
Score = 81 (33.6 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+ RC C+ GD C+RC GY+ G C+ C C G
Sbjct: 412 YGRCSCKPGVMGDKCDRCQPGYHSLTEAG----CRPCSCNPSG 450
Score = 76 (31.8 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 22/72 (30%), Positives = 26/72 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPCVQLDDDQVV 172
C C GG CE C GY G + C C C P G C D+
Sbjct: 689 CTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCNCRDNTAGP 748
Query: 173 -CSECPRGYGGE 183
C +C GY G+
Sbjct: 749 HCEKCSDGYYGD 760
Score = 63 (27.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + G +C C G+Y N G CK+C C
Sbjct: 903 QCECLPHVTGRDCGACDPGFY-NLQSGQ--GCKRCEC 936
Score = 63 (27.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 13/37 (35%), Positives = 14/37 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC 40
C C GG CE C GY G + C C C
Sbjct: 689 CTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTC 725
Score = 55 (24.4 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 103 CVPCNCNGHADIC 115
C PC C GH+ +C
Sbjct: 491 CTPCFCFGHSSVC 503
Score = 46 (21.3 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G +RC + A V C P + CVQ
Sbjct: 39 CTDE--GGRAQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQ 78
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CK 36
R C C DN + NC R C + Y A G D CK
Sbjct: 825 RLCQCNDNIDPNAVGNCNRLTGECLKCIYNTA--GFYCDRCK 864
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 281 (104.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 46/99 (46%), Positives = 63/99 (63%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
L GY E S G +S CV C CNGH++ CD E+G C C+DNT G +CE+C+ GYYG++
Sbjct: 703 LPGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGPHCEKCSDGYYGDSTL 762
Query: 147 GAVTDCKQCPCPNQGPCVQLDDD-QVVCSECPRGYGGEK 184
G +DC+ CPCP C + +VVC+ CP G G++
Sbjct: 763 GTSSDCQPCPCPGGSSCAIVPKTKEVVCTHCPTGTAGKR 801
Score = 244 (91.0 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 58/180 (32%), Positives = 81/180 (45%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+DNT G +CE+C+ GYYG++ G +DC+ CPCP C + +
Sbjct: 738 CDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPGGSSCAIVP-------------K 784
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPT-SGGAFSRCVPCNCNGHADI-----CDAE 118
K + + G A ++ GY +P S G C PC CN + D C+
Sbjct: 785 TKEVVCTHCPTGTA-GKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRL 843
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSEC 176
+G C+ C NT G C+RC G++GN L D CK C C G Q V +C
Sbjct: 844 TGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQC 903
Score = 144 (55.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 92 HEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAV 149
H T G C PC+C+ G D C+ E+GRC+C+DN G NCERC G++ N
Sbjct: 433 HSLTEAG----CRPCSCDLRGSTDECNVETGRCVCKDNVEGFNCERCKPGFF-NLESSNP 487
Query: 150 TDCKQCPC 157
C C C
Sbjct: 488 KGCTPCFC 495
Score = 141 (54.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 44/194 (22%), Positives = 78/194 (40%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +CE+C + + A + ++ C C + D + + G+
Sbjct: 303 CNCKHNTYGVDCEKCLPFFNDRPWRRATAESASESLPCDCNGRSQECYFDPELYRSTGHG 362
Query: 61 TRI-RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CD 116
+ G + R+ ++L G C PC+C+ + CD
Sbjct: 363 GHCTNCRDNTDGAKCERC---RENFFRL----------GNTEACSPCHCSPVGSLSTQCD 409
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVVCS 174
+ GRC C+ GD C+RC G++ G C+ C C +G + ++ + VC
Sbjct: 410 SY-GRCSCKPGVMGDKCDRCQPGFHSLTEAG----CRPCSCDLRGSTDECNVETGRCVCK 464
Query: 175 ECPRGYGGEKMSPG 188
+ G+ E+ PG
Sbjct: 465 DNVEGFNCERCKPG 478
Score = 140 (54.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 35/98 (35%), Positives = 49/98 (50%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
GY++ SG RC C+ G + CD +G+C CQ G +CERC ++G EG
Sbjct: 920 GYYNLQ-SGQGCERC-DCHALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFGFGPEG 977
Query: 148 AVTDCKQCPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
CK C C ++G +Q DD C EC G+ G +
Sbjct: 978 ----CKPCDCHHEGSLSLQCKDDGR-C-ECREGFVGNR 1009
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 42/157 (26%), Positives = 64/157 (40%)
Query: 14 DNCERCARGYYGNALEGAVTD--CKQCPC-PN-QG-PCVQLDDDQVSNLGNRTRIRIKS- 67
D C+ CA YG + + + QC C P+ G C D + + R
Sbjct: 877 DKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCERCDCH 936
Query: 68 ALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCNCN--GHADICDAES 119
ALG + T Q Q +TG H E F C PC+C+ G + +
Sbjct: 937 ALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD 996
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
GRC C++ G+ C++C Y+ N + C++CP
Sbjct: 997 GRCECREGFVGNRCDQCEENYFYNR---SWPGCQECP 1030
Score = 91 (37.1 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC+C+DN G NCERC G++ N C C C
Sbjct: 460 RCVCKDNVEGFNCERCKPGFF-NLESSNPKGCTPCFC 495
Score = 78 (32.5 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+ RC C+ GD C+RC G++ G C+ C C +G
Sbjct: 411 YGRCSCKPGVMGDKCDRCQPGFHSLTEAG----CRPCSCDLRG 449
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 22/72 (30%), Positives = 26/72 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPCVQLDDDQVV 172
C C GG CE C GY G + C C C P G C D+
Sbjct: 688 CTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGP 747
Query: 173 -CSECPRGYGGE 183
C +C GY G+
Sbjct: 748 HCEKCSDGYYGD 759
Score = 62 (26.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/37 (35%), Positives = 14/37 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC 40
C C GG CE C GY G + C C C
Sbjct: 688 CTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTC 724
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 103 CVPCNCNGHADIC 115
C PC C GH+ +C
Sbjct: 490 CTPCFCFGHSSVC 502
Score = 43 (20.2 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G +RC + A V C P + CVQ
Sbjct: 38 CADE--GGRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQ 77
Score = 40 (19.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CKQ 37
R C C DN + NC R C + Y A G D CK+
Sbjct: 824 RPCQCNDNIDPNAVGNCNRLTGECLKCIYNTA--GFYCDRCKE 864
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 279 (103.3 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 45/99 (45%), Positives = 64/99 (64%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
L+GY E + G +S CV C CNGH++ CD E+G C C+DNT G +CE+C+ GYYG++
Sbjct: 705 LSGYRRETPNLGPYSPCVLCACNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTA 764
Query: 147 GAVTDCKQCPCPNQGPCVQLDDD-QVVCSECPRGYGGEK 184
G +DC+ CPCP C + +VVC+ CP G G++
Sbjct: 765 GTSSDCQPCPCPGGSSCAVVPKTKEVVCTNCPTGTTGKR 803
Score = 225 (84.3 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 55/180 (30%), Positives = 78/180 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+DNT G +CE+C+ GYYG++ G +DC+ CPCP C + +
Sbjct: 740 CNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVP-------------K 786
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDAE 118
K + N G ++ GY +P G C C C+ + D C+
Sbjct: 787 TKEVVCTNCPTGTT-GKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRL 845
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSEC 176
+G C+ C NT G C+RC G++GN L D CK C C G Q V +C
Sbjct: 846 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQC 905
Score = 147 (56.8 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 46/193 (23%), Positives = 77/193 (39%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +CE+C + + A + ++C C C + D + + G+
Sbjct: 305 CNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGH- 363
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDA 117
GG+ T T H + + G C C+C+ + CD+
Sbjct: 364 ---------GGHCTNCQDNTDGAHCERCRENFFRL--GNNEACSSCHCSPVGSLSTQCDS 412
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVVCSE 175
GRC C+ GD C+RC G++ G C+ C C G + ++ + VC +
Sbjct: 413 Y-GRCSCKPGVMGDKCDRCQPGFHSLTEAG----CRPCSCDPSGSIDECNIETGRCVCKD 467
Query: 176 CPRGYGGEKMSPG 188
G+ E+ PG
Sbjct: 468 NVEGFNCERCKPG 480
Score = 142 (55.0 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 92 HEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAV 149
H T G C PC+C+ G D C+ E+GRC+C+DN G NCERC G++ N
Sbjct: 435 HSLTEAG----CRPCSCDPSGSIDECNIETGRCVCKDNVEGFNCERCKPGFF-NLESSNP 489
Query: 150 TDCKQCPC 157
C C C
Sbjct: 490 RGCTPCFC 497
Score = 132 (51.5 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 33/91 (36%), Positives = 44/91 (48%)
Query: 96 SGGAFSRCVPCNCNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG RC C+ G + CD +G+C CQ G +CERC ++G EG CK
Sbjct: 928 SGQGCERC-DCHALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHFGFGPEG----CKP 982
Query: 155 CPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
C C +G +Q DD C EC G+ G +
Sbjct: 983 CDCHPEGSLSLQCKDDGR-C-ECREGFVGNR 1011
Score = 114 (45.2 bits), Expect = 0.00094, P = 0.00094
Identities = 46/172 (26%), Positives = 68/172 (39%)
Query: 14 DNCERCARGYYGNALEGAVTD--CKQCPC-PN-QGPCVQLDDDQVSNL--GNRTRIRIKS 67
D C+ C YG + + + QC C P+ G D NL G
Sbjct: 879 DKCKACNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCH 938
Query: 68 ALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCNCN--GHADICDAES 119
ALG + T Q Q +TG H E F C PC+C+ G + +
Sbjct: 939 ALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDD 998
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
GRC C++ G+ C++C Y+ N + C++CP C +L D+V
Sbjct: 999 GRCECREGFVGNRCDQCEENYFYNR---SWPGCQECPA-----CYRLVKDKV 1042
Score = 91 (37.1 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC+C+DN G NCERC G++ N C C C
Sbjct: 462 RCVCKDNVEGFNCERCKPGFF-NLESSNPRGCTPCFC 497
Score = 78 (32.5 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+ RC C+ GD C+RC G++ G C+ C C G
Sbjct: 413 YGRCSCKPGVMGDKCDRCQPGFHSLTEAG----CRPCSCDPSG 451
Score = 76 (31.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 22/72 (30%), Positives = 26/72 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPCVQLDDDQVV 172
C C GG CE C GY G + C C C P G C D+
Sbjct: 690 CTCPVGYGGQFCEMCLSGYRRETPNLGPYSPCVLCACNGHSETCDPETGVCNCRDNTAGP 749
Query: 173 -CSECPRGYGGE 183
C +C GY G+
Sbjct: 750 HCEKCSDGYYGD 761
Score = 61 (26.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + G +C C G+Y N G C++C C
Sbjct: 904 QCECLPHVTGQDCGACDPGFY-NLQSGQ--GCERCDC 937
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 103 CVPCNCNGHADIC 115
C PC C GH+ +C
Sbjct: 492 CTPCFCFGHSSVC 504
Score = 43 (20.2 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G +RC + A V C P + CVQ
Sbjct: 40 CTDE--GGRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQ 79
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CK 36
R C C DN + NC R C + Y A G D CK
Sbjct: 826 RLCQCSDNIDPNAVGNCNRLTGECLKCIYNTA--GFYCDRCK 865
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 281 (104.0 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 46/99 (46%), Positives = 63/99 (63%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
L GY E S G +S CV C CNGH++ CD E+G C C+DNT G +CE+C+ GYYG++
Sbjct: 703 LPGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGPHCEKCSDGYYGDSTL 762
Query: 147 GAVTDCKQCPCPNQGPCVQLDDD-QVVCSECPRGYGGEK 184
G +DC+ CPCP C + +VVC+ CP G G++
Sbjct: 763 GTSSDCQPCPCPGGSSCAIVPKTKEVVCTHCPTGTAGKR 801
Score = 244 (91.0 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 58/180 (32%), Positives = 81/180 (45%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+DNT G +CE+C+ GYYG++ G +DC+ CPCP C + +
Sbjct: 738 CDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPGGSSCAIVP-------------K 784
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPT-SGGAFSRCVPCNCNGHADI-----CDAE 118
K + + G A ++ GY +P S G C PC CN + D C+
Sbjct: 785 TKEVVCTHCPTGTA-GKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRL 843
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSEC 176
+G C+ C NT G C+RC G++GN L D CK C C G Q V +C
Sbjct: 844 TGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQC 903
Score = 148 (57.2 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 45/194 (23%), Positives = 76/194 (39%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +CE+C + + A + C C C + D + + G+
Sbjct: 303 CNCKHNTYGVDCEKCLPFFNDRPWRRATAESANQCLPCDCNGRSQECYFDPELYRSTGHG 362
Query: 61 TRI-RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CD 116
+ G + R+ ++L G C PC+C+ + CD
Sbjct: 363 GHCTNCRDNTDGAKCERC---RENFFRL----------GNTEACSPCHCSPVGSLSTQCD 409
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVVCS 174
+ GRC C+ GD C+RC G++ G C+ C C G + ++ + VC
Sbjct: 410 SY-GRCSCKPGVMGDKCDRCQPGFHSLTEAG----CRPCSCDPSGSTDECNVETGRCVCK 464
Query: 175 ECPRGYGGEKMSPG 188
+ G+ E+ PG
Sbjct: 465 DNVEGFSCERCKPG 478
Score = 139 (54.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 92 HEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAV 149
H T G C PC+C+ G D C+ E+GRC+C+DN G +CERC G++ N
Sbjct: 433 HSLTEAG----CRPCSCDPSGSTDECNVETGRCVCKDNVEGFSCERCKPGFF-NLESSNP 487
Query: 150 TDCKQCPC 157
C C C
Sbjct: 488 KGCTPCFC 495
Score = 135 (52.6 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 30/86 (34%), Positives = 42/86 (48%)
Query: 103 CVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C C+C+ CD +G+C CQ G +CERC ++G EG CK C C +
Sbjct: 930 CESCDCHALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFGFGPEG----CKPCDCHH 985
Query: 160 QGPC-VQLDDDQVVCSECPRGYGGEK 184
+G +Q DD C EC G+ G +
Sbjct: 986 EGSLSLQCKDDGR-C-ECREGFVGNR 1009
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 47/172 (27%), Positives = 69/172 (40%)
Query: 14 DNCERCARGYYGNALEGAVTD--CKQCPC-PN-QGPCVQLDDDQVSNL--GNRTRIRIKS 67
D C+ CA YG + + + QC C P+ G D NL G
Sbjct: 877 DKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGACDPGFYNLQSGQGCESCDCH 936
Query: 68 ALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCNCN--GHADICDAES 119
ALG + T Q Q +TG H E F C PC+C+ G + +
Sbjct: 937 ALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDD 996
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
GRC C++ G+ C++C Y+ N + C++CP C +L D+V
Sbjct: 997 GRCECREGFVGNRCDQCEENYFYNR---SWPGCQECPA-----CYRLVKDKV 1040
Score = 86 (35.3 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC+C+DN G +CERC G++ N C C C
Sbjct: 460 RCVCKDNVEGFSCERCKPGFF-NLESSNPKGCTPCFC 495
Score = 78 (32.5 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+ RC C+ GD C+RC G++ G C+ C C G
Sbjct: 411 YGRCSCKPGVMGDKCDRCQPGFHSLTEAG----CRPCSCDPSG 449
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 22/72 (30%), Positives = 26/72 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPCVQLDDDQVV 172
C C GG CE C GY G + C C C P G C D+
Sbjct: 688 CTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGP 747
Query: 173 -CSECPRGYGGE 183
C +C GY G+
Sbjct: 748 HCEKCSDGYYGD 759
Score = 62 (26.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 13/37 (35%), Positives = 14/37 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC 40
C C GG CE C GY G + C C C
Sbjct: 688 CTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTC 724
Score = 60 (26.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + G +C C G+Y N G C+ C C
Sbjct: 902 QCQCLPHVSGRDCGACDPGFY-NLQSGQ--GCESCDC 935
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 103 CVPCNCNGHADIC 115
C PC C GH+ +C
Sbjct: 490 CTPCFCFGHSSVC 502
Score = 43 (20.2 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G +RC + A V C P + CVQ
Sbjct: 38 CADE--GGRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQ 77
Score = 40 (19.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CKQ 37
R C C DN + NC R C + Y A G D CK+
Sbjct: 824 RPCQCNDNIDPNAVGNCNRLTGECLKCIYNTA--GFYCDRCKE 864
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 283 (104.7 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY E G +S CVPC CNGH++ CD E+G C C+DNT G +CE+C+ GYYG+A G
Sbjct: 462 GYRRETPGLGPYSPCVPCTCNGHSETCDPETGMCDCRDNTAGSHCEKCSDGYYGDATAGT 521
Query: 149 VTDCKQCPCPNQGPCVQLD-DDQVVCSECPRGYGGEK 184
DC+ CPCP C + +VVC+ C G G++
Sbjct: 522 ALDCQPCPCPGGSSCAVVPRTKEVVCTSCQTGTTGKR 558
Score = 236 (88.1 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 58/181 (32%), Positives = 81/181 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR-I 63
C C+DNT G +CE+C+ GYYG+A G DC+ CPCP C + RT+ +
Sbjct: 495 CDCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPGGSSCAVVP---------RTKEV 545
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDA 117
S G + L ++ G +P GA C C CN + D C+
Sbjct: 546 VCTSCQTGTTGKRCELCDDAYF---G---DPLGENGAVRPCRLCQCNDNIDPNAVGNCNR 599
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSE 175
++G C+ C NT G C+RC G++GN L D C+ C C G Q V +
Sbjct: 600 QTGECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQ 659
Query: 176 C 176
C
Sbjct: 660 C 660
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/197 (24%), Positives = 84/197 (42%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT GD+CE+C + + A + +C C C + D + + G+
Sbjct: 60 CNCKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHG 119
Query: 61 TRIRIKSALG-GNRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--- 114
+G + T G R + Y+L G+ C+PC+CN +
Sbjct: 120 GH-----CMGCRDNTDGAHCERCRDSFYRL----------GSEEGCLPCSCNPVGSLSTQ 164
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-P--NQGPCVQLDDDQV 171
CD+ G+C C+ G+ C+RC G++ + G C+ C C P + G C ++ +
Sbjct: 165 CDSY-GQCSCKPGVMGEKCDRCQPGFHSLSEAG----CRPCSCNPAGSTGEC-NMETGRC 218
Query: 172 VCSECPRGYGGEKMSPG 188
C + G+ E+ PG
Sbjct: 219 TCKDNVEGFHCERCKPG 235
Score = 126 (49.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 31/91 (34%), Positives = 43/91 (47%)
Query: 96 SGGAFSRCVPCNCNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG RC C+ G + CD +G+C CQ G C+RC ++G EG CK
Sbjct: 683 SGRGCERC-DCHALGSTNGQCDIWTGQCECQPGVTGQRCDRCEANHFGFGPEG----CKP 737
Query: 155 CPCPNQGP-CVQLDDDQVVCSECPRGYGGEK 184
C C +G +Q +D C EC G+ G +
Sbjct: 738 CDCDPEGSRALQCREDGR-C-ECKEGFVGSR 766
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
G+H +G C PC+CN G C+ E+GRC C+DN G +CERC G++ +
Sbjct: 188 GFHSLSEAG-----CRPCSCNPAGSTGECNMETGRCTCKDNVEGFHCERCKPGFF-HLDP 241
Query: 147 GAVTDCKQCPC 157
C C C
Sbjct: 242 SNPRGCTPCFC 252
Score = 75 (31.5 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC C+DN G +CERC G++ + C C C
Sbjct: 217 RCTCKDNVEGFHCERCKPGFF-HLDPSNPRGCTPCFC 252
Score = 74 (31.1 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 22/72 (30%), Positives = 27/72 (37%)
Query: 122 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPCVQLDDDQVV 172
C C G CERC+ GY G + C C C P G C D+
Sbjct: 445 CSCPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCTCNGHSETCDPETGMCDCRDNTAGS 504
Query: 173 -CSECPRGYGGE 183
C +C GY G+
Sbjct: 505 HCEKCSDGYYGD 516
Score = 69 (29.3 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+ +C C+ G+ C+RC G++ + G C+ C C G
Sbjct: 168 YGQCSCKPGVMGEKCDRCQPGFHSLSEAG----CRPCSCNPAG 206
Score = 57 (25.1 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 90 YHHEPTSGGAFSRCVPCNCNGHADIC 115
+H +P++ C PC C GH+ +C
Sbjct: 237 FHLDPSNPRG---CTPCFCFGHSSVC 259
Score = 51 (23.0 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + +C C G++ N G C++C C
Sbjct: 659 QCECLSHVTERDCSACEPGFF-NLQSGR--GCERCDC 692
Score = 38 (18.4 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CK 36
R C C DN + NC R C + Y A G D CK
Sbjct: 581 RLCQCNDNIDPNAVGNCNRQTGECLKCIYNTA--GFYCDRCK 620
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 254 (94.5 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 50/109 (45%), Positives = 63/109 (57%)
Query: 89 GYHHE--PTSGGAFSR-----CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGY 140
GY+ E P SGG R CVPCNCN H+D+CD E+G+C+ C+D+T GD+CE CA GY
Sbjct: 1386 GYYREKLPESGGRGPRPLLAPCVPCNCNNHSDVCDPETGKCLSCRDHTSGDHCELCASGY 1445
Query: 141 YGNALEGAVTDCKQCPCPNQGP------CVQLDDDQVVCSECPRGYGGE 183
YG + G DC C CP+ P CV D C+ C GY G+
Sbjct: 1446 YGK-VTGLPGDCTPCTCPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQ 1493
Score = 210 (79.0 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 44/105 (41%), Positives = 54/105 (51%)
Query: 87 LTGYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRC-ICQDNTGGDNCERCARGYYGNA 144
L GY+ G F C PC C+GHA CD G C +C NT GD+CE+C G+YG
Sbjct: 731 LPGYYR--VDGILFGGICQPCECHGHASECDIH-GICSVCTHNTTGDHCEQCLPGFYGTP 787
Query: 145 LEGAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGG 182
G DC+ C CP N P C D ++VVC +C GY G
Sbjct: 788 SRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEVVCDQCAPGYSG 832
Score = 206 (77.6 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 59/173 (34%), Positives = 82/173 (47%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C+ C+D+T GD+CE CA GYYG + G DC C CP+ P V G+ +
Sbjct: 1425 KCLSCRDHTSGDHCELCASGYYGK-VTGLPGDCTPCTCPHHPP-FSFSPTCVVE-GD-SD 1480
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADICDAE 118
R + L G G R + GYH P + G C C+CN G H+D CD
Sbjct: 1481 FRCNACLPGYE--GQYCERCS----AGYHGNPRAAGG--SCQTCDCNPQGSVHSD-CDRA 1531
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
SG+C+C+ G +CE+C + +E +DC C GP + D D V
Sbjct: 1532 SGQCVCKPGATGLHCEKCLPRHI--LME---SDCVSCDDDCVGPLLN-DLDSV 1578
Score = 201 (75.8 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 59/195 (30%), Positives = 84/195 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C NT G +CERCA G+YG+A+ +C+ C C G +S +
Sbjct: 877 CLKCLWNTDGAHCERCADGFYGDAV--TAKNCRACDCHENG--------SLSGV-----C 921
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICD--AESGR 121
+++ L + +Q L+GY+ T G CVPCNC+ + D E G+
Sbjct: 922 HLETGLCDCKPH--VTGQQCDQCLSGYYGLDTGLG----CVPCNCSVEGSVSDNCTEEGQ 975
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCK----QCPC-PNQGPCVQLDDDQ-VVCSE 175
C C G C+RC+ G+Y +G T C Q C P G C+ Q + C E
Sbjct: 976 CHCGPGVSGKQCDRCSHGFYAFQ-DGGCTPCDCAHTQNNCDPASGECLCPPHTQGLKCEE 1034
Query: 176 CPRGYGGEKMSPGAQ 190
C Y G G Q
Sbjct: 1035 CEEAYWGLDPEQGCQ 1049
Score = 152 (58.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 49/181 (27%), Positives = 73/181 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C G CERCA GYYGN T C C C +D + + + T +K
Sbjct: 826 CAPGYSGSWCERCADGYYGNPTVPGGT-CVPCNCSGN-----VDPLEAGHCDSVTGECLK 879
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC--NGH-ADICDAESGRCI 123
T G R G++ + + C C+C NG + +C E+G C
Sbjct: 880 CLWN---TDGAHCERCAD----GFYGDAVTA---KNCRACDCHENGSLSGVCHLETGLCD 929
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
C+ + G C++C GYYG L+ + C C C +G ++ C C G G+
Sbjct: 930 CKPHVTGQQCDQCLSGYYG--LDTGL-GCVPCNCSVEGSVSDNCTEEGQC-HCGPGVSGK 985
Query: 184 K 184
+
Sbjct: 986 Q 986
Score = 151 (58.2 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 51/169 (30%), Positives = 67/169 (39%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPC--VQLDDDQVSNLGN 59
C+ C NT G NCE C YY D C+ C C G V + DD+ ++L N
Sbjct: 368 CVNCSQNTTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLAN 427
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC-DAE 118
K +G A + Q GY F C+PC+C + D
Sbjct: 428 G-----KWPGQCPCRKGYAGDKCDRCQF-GYR-------GFPNCIPCDCRTVGSLNEDPC 474
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN-QGPCVQL 166
C+C+ N G NC+RC G+Y N E C +C C G C L
Sbjct: 475 IEPCLCKKNVEGKNCDRCKPGFY-NLKERNPEGCSECFCFGVSGVCDSL 522
Score = 138 (53.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C PC+C + CD SG C+C +T G CE C Y+G E C+ C C G
Sbjct: 1002 CTPCDCAHTQNNCDPASGECLCPPHTQGLKCEECEEAYWGLDPEQG---CQACNCSAVGS 1058
Query: 163 C-VQLDDDQVVCSECP--RGYGGE 183
Q D V+ CP +G+GG+
Sbjct: 1059 TSAQCD---VLSGHCPCKKGFGGQ 1079
Score = 124 (48.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 47/166 (28%), Positives = 59/166 (35%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G CE C Y+G E C+ C C G D +S
Sbjct: 1021 CLCPPHTQGLKCEECEEAYWGLDPEQG---CQACNCSAVGS-TSAQCDVLSG-----HCP 1071
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA---DICDAE--- 118
K GG + H GY +F CVPC C+ D CD E
Sbjct: 1072 CKKGFGG---------QSCHQCSLGYR-------SFPDCVPCGCDLRGTLPDTCDLEQGL 1115
Query: 119 ------SGRCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC 157
SG C C++N G C +C G + AL G C C C
Sbjct: 1116 CSCSEDSGTCSCKENVVGPQCSKCQAGTF--ALRGDNPQGCSPCFC 1159
Score = 113 (44.8 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
+C NT GD+CE+C G+YG G DC+ C CP
Sbjct: 766 VCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACP 801
Score = 76 (31.8 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 19/63 (30%), Positives = 24/63 (38%)
Query: 122 CICQDNTGGDNCERCARGYYGNAL--EGA------VTDCKQCPCPNQGPCVQLDDDQVVC 173
C+C T G +C+ CA GYY L G + C C C N D + C
Sbjct: 1369 CVCPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNCNNHSDVC--DPETGKC 1426
Query: 174 SEC 176
C
Sbjct: 1427 LSC 1429
Score = 71 (30.1 bits), Expect = 6.4e-24, Sum P(2) = 6.4e-24
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCK----QCPC-PNQGPCV 47
+C C G C+RC+ G+Y +G T C Q C P G C+
Sbjct: 975 QCHCGPGVSGKQCDRCSHGFYAFQ-DGGCTPCDCAHTQNNCDPASGECL 1022
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 103 CVPCNCNGHADICDAESG 120
C PC C G + +C G
Sbjct: 1154 CSPCFCFGLSQLCSELEG 1171
Score = 40 (19.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 14 DNCERCARGYYGNALEGAV 32
++CE C +GY G + E +
Sbjct: 714 EHCE-CPQGYTGTSCEACL 731
Score = 40 (19.1 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 7/16 (43%), Positives = 7/16 (43%)
Query: 173 CSECPRGYGGEKMSPG 188
C C GY G PG
Sbjct: 835 CERCADGYYGNPTVPG 850
Score = 37 (18.1 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 173 CSECPRGYGGEKM 185
C +C GY EK+
Sbjct: 1380 CQDCAPGYYREKL 1392
Score = 37 (18.1 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 173 CSECPRGYGGEKMSPG 188
C C GY G + G
Sbjct: 1495 CERCSAGYHGNPRAAG 1510
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 250 (93.1 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 52/115 (45%), Positives = 63/115 (54%)
Query: 85 YQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGN 143
Y+L T G CVPC CNGH+ +CD E+ C CQ +T GD CERCA GYYG
Sbjct: 1399 YRLRSQPGGRTPGPTLGTCVPCQCNGHSSLCDPETSICQNCQHHTAGDFCERCALGYYG- 1457
Query: 144 ALEGAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGG---EKMSPG 188
++G DC+QC CP N P CV D C+ CPRGY G E+ +PG
Sbjct: 1458 IVKGLPNDCQQCACPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPG 1512
Score = 213 (80.0 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 40/102 (39%), Positives = 54/102 (52%)
Query: 92 HEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAV 149
H +G F C PC C GHA+ CD +G C+ C+D+TGG C++C G+YG +G
Sbjct: 742 HRRVNGTIFGGICEPCQCFGHAESCDDVTGECLNCKDHTGGPYCDKCLPGFYGEPTKGTS 801
Query: 150 TDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC+ C CP N P LD ++C CP GY G +
Sbjct: 802 EDCQPCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPR 843
Score = 158 (60.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/155 (29%), Positives = 65/155 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ +T GD CERCA GYYG ++G DC+QC CP +S+ N + +
Sbjct: 1439 CQHHTAGDFCERCALGYYG-IVKGLPNDCQQCACP-----------LISSSNNFSPSCVA 1486
Query: 67 SALGGNRTRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
L R + Y GY P + G C C C+ + + CD +G
Sbjct: 1487 EGLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGG--SCQECECDPYGSLPVPCDPVTG 1544
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+ G C+ C + +A EG +C C
Sbjct: 1545 FCTCRPGATGRKCDGCK---HWHAREG--WECVFC 1574
Score = 153 (58.9 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 35/102 (34%), Positives = 50/102 (49%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRC-ICQDNTGGDNCERCARGYYG 142
GY +P+ G C PC CN + D CD+ SG C IC+ T G CE CA GY+G
Sbjct: 850 GYFGQPSVPGG--SCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFG 907
Query: 143 NALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+A++ +C+ C C G ++ Q EC G++
Sbjct: 908 DAVDAK--NCQPCRCNAGGSFSEVCHSQTGQCECRANVQGQR 947
Score = 150 (57.9 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 51/198 (25%), Positives = 82/198 (41%)
Query: 3 RRC-ICQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSN 56
R C +C D GD NC+ C G+ E + QC C + D +
Sbjct: 896 RYCELCADGYFGDAVDAKNCQPCRCNAGGSFSEVCHSQTGQCECRANVQGQRCDKCKAGT 955
Query: 57 LGNRTR---IRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCN 107
G ++ + G+++ + Q Q +TG + + G F+ C C
Sbjct: 956 FGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACE 1015
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQL 166
C+ + CD ++GRCIC NT G+ C +CA +G+++ T CK C C G Q
Sbjct: 1016 CSHLGNNCDPKTGRCICPPNTIGEKCSKCAPNTWGHSI---TTGCKACNCSTVGSLDFQC 1072
Query: 167 DDDQVVCSECPRGYGGEK 184
+ + C+ C + G K
Sbjct: 1073 NVNTGQCN-CHPKFSGAK 1089
Score = 139 (54.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 48/163 (29%), Positives = 71/163 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI C NT G NCE C G++ +G + + PC PC +G+ +
Sbjct: 378 CINCTQNTAGINCETCTDGFFRP--KGVSPNYPR-PCQ---PC------HCDPIGSLNEV 425
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHH---EPTSGG--AFSRCVPCNCNG----HADI 114
+K + RGLA H + TG+ + + G + C CNC+G + D
Sbjct: 426 CVKDEK--HARRGLA-PGSCHCK-TGFGGVSCDRCARGYTGYPDCKACNCSGLGSKNEDP 481
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C G CIC++N G +C RC G++ N E C +C C
Sbjct: 482 C---FGPCICKENVEGGDCSRCKSGFF-NLQEDNWKGCDECFC 520
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 50/176 (28%), Positives = 73/176 (41%)
Query: 33 TDCKQCPCPNQGP-CVQLDDDQVSNLGNRTRIRIKSALGG---NRTRGLA-LTRQTHYQL 87
T+C+ C C + C D+ V+ IR K GG N T+ A + +T
Sbjct: 339 TECEACNCHGKAEECYY--DENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTD- 395
Query: 88 TGYHHEPTSGGAFSR-CVPCNCN--GHA-DICDAES---------GRCICQDNTGGDNCE 134
G+ + R C PC+C+ G ++C + G C C+ GG +C+
Sbjct: 396 -GFFRPKGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCD 454
Query: 135 RCARGYYGNALEGAVTDCKQCPC---------PNQGPCVQLDD-DQVVCSECPRGY 180
RCARGY G DCK C C P GPC+ ++ + CS C G+
Sbjct: 455 RCARGYTG------YPDCKACNCSGLGSKNEDPCFGPCICKENVEGGDCSRCKSGF 504
Score = 115 (45.5 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ C+D+TGG C++C G+YG +G DC+ C CP
Sbjct: 773 CLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACP 810
Score = 108 (43.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 33/104 (31%), Positives = 44/104 (42%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC------NGHADIC--DAESGR-CI-CQDNTGGDNCERC 136
L G++ EPT G + C PC C N + C D G C C G CERC
Sbjct: 789 LPGFYGEPTKGTS-EDCQPCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCERC 847
Query: 137 ARGYYGN-ALEGAVTDCKQCPCPNQ------GPCVQLDDDQVVC 173
A GY+G ++ G C+ C C + G C L ++C
Sbjct: 848 AEGYFGQPSVPGG--SCQPCQCNDNLDFSIPGSCDSLSGSCLIC 889
Score = 93 (37.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 100 FSRCVPCNC---NGHADICDAESGRCICQDNTG---------GDNCERCARGYYGNALEG 147
+ RC C+C A CD+E+ +C C D TG G +C+RC G +G +
Sbjct: 1100 YPRCNLCDCFLPGTDATTCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKN 1159
Query: 148 AVTDCKQCPC 157
+ C C C
Sbjct: 1160 PL-GCSSCYC 1168
Score = 85 (35.0 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
F CIC++N G +C RC G++ N E C +C C
Sbjct: 483 FGPCICKENVEGGDCSRCKSGFF-NLQEDNWKGCDECFC 520
Score = 73 (30.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 7 CQDNTGGDNCERCARGYYGN-ALEGAVTDCKQCPC 40
C G CERCA GY+G ++ G C+ C C
Sbjct: 835 CPVGYTGPRCERCAEGYFGQPSVPGG--SCQPCQC 867
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/138 (24%), Positives = 48/138 (34%)
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
R++S GG RT G L Q G H S C C + D C+ RC
Sbjct: 1400 RLRSQPGG-RTPGPTLGTCVPCQCNG--HSSLCDPETSICQNCQHHTAGDFCE----RCA 1452
Query: 124 C--QDNTGG--DNCERCA-------RGYYGNALEGAVTD--CKQCPCPNQGPCVQLDDDQ 170
G ++C++CA + + + + D C CP +G
Sbjct: 1453 LGYYGIVKGLPNDCQQCACPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQ-------- 1504
Query: 171 VVCSECPRGYGGEKMSPG 188
C C GY G +PG
Sbjct: 1505 -YCERCAPGYTGSPGNPG 1521
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 141 YGNAL-EGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
YGN + + +++ + +G + D + +CP GY G E PG
Sbjct: 1345 YGNFMRQSRISEISMEVAEQGRGTTMTPPADLIEKCDCPLGYSGLSCEACLPG 1397
Score = 37 (18.1 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
G CE C + + + +C C GP
Sbjct: 751 GGICEPCQCFGHAESCDDVTGECLNCKDHTGGP 783
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 283 (104.7 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY E G +S CVPC CNGH++ CD E+G C C+DNT G +CE+C+ GYYG+A G
Sbjct: 706 GYRRETPGLGPYSPCVPCTCNGHSETCDPETGMCDCRDNTAGSHCEKCSDGYYGDATAGT 765
Query: 149 VTDCKQCPCPNQGPCVQLD-DDQVVCSECPRGYGGEK 184
DC+ CPCP C + +VVC+ C G G++
Sbjct: 766 ALDCQPCPCPGGSSCAVVPRTKEVVCTSCQTGTTGKR 802
Score = 236 (88.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 58/181 (32%), Positives = 81/181 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR-I 63
C C+DNT G +CE+C+ GYYG+A G DC+ CPCP C + RT+ +
Sbjct: 739 CDCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPCPGGSSCAVVP---------RTKEV 789
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDA 117
S G + L ++ G +P GA C C CN + D C+
Sbjct: 790 VCTSCQTGTTGKRCELCDDAYF---G---DPLGENGAVRPCRLCQCNDNIDPNAVGNCNR 843
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSE 175
++G C+ C NT G C+RC G++GN L D C+ C C G Q V +
Sbjct: 844 QTGECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQ 903
Query: 176 C 176
C
Sbjct: 904 C 904
Score = 160 (61.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 49/197 (24%), Positives = 84/197 (42%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT GD+CE+C + + A + +C C C + D + + G+
Sbjct: 304 CNCKHNTFGDDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHG 363
Query: 61 TRIRIKSALG-GNRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--- 114
+G + T G R + Y+L G+ C+PC+CN +
Sbjct: 364 GH-----CMGCRDNTDGAHCERCRDSFYRL----------GSEEGCLPCSCNPVGSLSTQ 408
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-P--NQGPCVQLDDDQV 171
CD+ G+C C+ G+ C+RC G++ + G C+ C C P + G C ++ +
Sbjct: 409 CDSY-GQCSCKPGVMGEKCDRCQPGFHSLSEAG----CRPCSCNPAGSTGEC-NMETGRC 462
Query: 172 VCSECPRGYGGEKMSPG 188
C + G+ E+ PG
Sbjct: 463 TCKDNVEGFHCERCKPG 479
Score = 126 (49.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 31/91 (34%), Positives = 43/91 (47%)
Query: 96 SGGAFSRCVPCNCNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG RC C+ G + CD +G+C CQ G C+RC ++G EG CK
Sbjct: 927 SGRGCERC-DCHALGSTNGQCDIWTGQCECQPGVTGQRCDRCEANHFGFGPEG----CKP 981
Query: 155 CPCPNQGP-CVQLDDDQVVCSECPRGYGGEK 184
C C +G +Q +D C EC G+ G +
Sbjct: 982 CDCDPEGSRALQCREDGR-C-ECKEGFVGSR 1010
Score = 125 (49.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
G+H +G C PC+CN G C+ E+GRC C+DN G +CERC G++ +
Sbjct: 432 GFHSLSEAG-----CRPCSCNPAGSTGECNMETGRCTCKDNVEGFHCERCKPGFF-HLDP 485
Query: 147 GAVTDCKQCPC 157
C C C
Sbjct: 486 SNPRGCTPCFC 496
Score = 75 (31.5 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC C+DN G +CERC G++ + C C C
Sbjct: 461 RCTCKDNVEGFHCERCKPGFF-HLDPSNPRGCTPCFC 496
Score = 69 (29.3 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+ +C C+ G+ C+RC G++ + G C+ C C G
Sbjct: 412 YGQCSCKPGVMGEKCDRCQPGFHSLSEAG----CRPCSCNPAG 450
Score = 51 (23.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + +C C G++ N G C++C C
Sbjct: 903 QCECLSHVTERDCSACEPGFF-NLQSGR--GCERCDC 936
Score = 39 (18.8 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C + G +RC + NA V C P + CVQ
Sbjct: 40 CTEERSG-RPQRCMPEFV-NAAFNTVVATNTCGTPAEEYCVQ 79
Score = 38 (18.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 3 RRCICQDNTGGD---NCER----CARGYYGNALEGAVTD-CK 36
R C C DN + NC R C + Y A G D CK
Sbjct: 825 RLCQCNDNIDPNAVGNCNRQTGECLKCIYNTA--GFYCDRCK 864
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 247 (92.0 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 50/115 (43%), Positives = 64/115 (55%)
Query: 85 YQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGN 143
Y+L T G CVPC C+GH+++CD E+ C CQ +T GD CERCA GYYG
Sbjct: 1362 YRLRSEPGGRTPGATLGTCVPCQCHGHSNLCDPETSICQNCQHHTAGDFCERCALGYYG- 1420
Query: 144 ALEGAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGG---EKMSPG 188
++G DC+QC CP N P C+ D C+ CPRGY G E+ +PG
Sbjct: 1421 IVKGLPNDCQQCACPLISSSNNFSPSCIMEGLDDYRCTACPRGYEGKYCERCAPG 1475
Score = 218 (81.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 39/102 (38%), Positives = 56/102 (54%)
Query: 92 HEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAV 149
H +G F C PC C GHA+ CD +G C+ C+D+T G C++C G+YG+ +G
Sbjct: 705 HRRVNGTIFGGLCEPCQCFGHAESCDDTTGECLNCKDHTDGPYCDKCLPGFYGDPTKGTS 764
Query: 150 TDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC+ C CP N P +D ++C ECP GY G++
Sbjct: 765 DDCQPCACPLNSPSNNFSPTCHMDRSLGLICDECPVGYSGQR 806
Score = 178 (67.7 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 46/146 (31%), Positives = 62/146 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ +T GD CERCA GYYG ++G DC+QC CP +S+ N + I
Sbjct: 1402 CQHHTAGDFCERCALGYYG-IVKGLPNDCQQCACP-----------LISSSNNFSPSCIM 1449
Query: 67 SALGGNRTRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
L R + Y GY P+S G C C C+ H + CD G
Sbjct: 1450 EGLDDYRCTACPRGYEGKYCERCAPGYAGSPSSPGG--SCQECECDPHGSLPVPCDPVMG 1507
Query: 121 RCICQDNTGGDNCERCARGYYGNALE 146
C C+ G C+ C +G+ +E
Sbjct: 1508 ICTCRPGATGPKCDGCEQGHAREGME 1533
Score = 167 (63.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/198 (28%), Positives = 85/198 (42%)
Query: 3 RRC-ICQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPC-PN-QGP-CVQLDDDQ 53
R C +C D GD NC+ C G+ E QC C PN QG C + +
Sbjct: 859 RYCELCADGYFGDAVDAKNCQPCHCNANGSFSEVCHAQTGQCECKPNVQGRRCDECKPET 918
Query: 54 VSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCN 107
R I G+++ + Q Q +TG + + G F+ C C+
Sbjct: 919 FGLQSARGCIPCNCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACD 978
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQL 166
C+ + CD ++GRCIC NT G+ C +CA +G+++ T CK C C + G Q
Sbjct: 979 CSHLGNNCDPKTGRCICPPNTIGEKCSKCAPRTWGHSI---TTGCKACNCSSVGSLDFQC 1035
Query: 167 DDDQVVCSECPRGYGGEK 184
D + C +C + G K
Sbjct: 1036 DLNMGQC-KCHPKFSGAK 1052
Score = 152 (58.6 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 51/167 (30%), Positives = 71/167 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGN-RTR 62
RCIC NT G+ C +CA +G+++ T CK C C + G LD N+G +
Sbjct: 992 RCICPPNTIGEKCSKCAPRTWGHSI---TTGCKACNCSSVG---SLDFQCDLNMGQCKCH 1045
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC--NGHAD-ICDAES 119
+ A TRG H+ Y H C PC+C +G D CD E+
Sbjct: 1046 PKFSGAKCTECTRG-------HWN---YPH----------CSPCDCFLSGTDDSTCDLET 1085
Query: 120 GRCICQDNTG---------GDNCERCARGYYGNALEGAVTDCKQCPC 157
+C C D TG G +C+RC G +G + + C C C
Sbjct: 1086 KKCSCIDQTGQCTCKVNVEGIHCDRCRPGKFGLEAKNPL-GCNSCYC 1131
Score = 151 (58.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 35/102 (34%), Positives = 49/102 (48%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRC-ICQDNTGGDNCERCARGYYG 142
GY +P+ G C PC CN + D CD+ SG C IC+ T G CE CA GY+G
Sbjct: 813 GYFGQPSVPGG--SCQPCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFG 870
Query: 143 NALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+A++ +C+ C C G ++ Q EC G +
Sbjct: 871 DAVDAK--NCQPCHCNANGSFSEVCHAQTGQCECKPNVQGRR 910
Score = 146 (56.5 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 50/189 (26%), Positives = 74/189 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ N G C+ C +G L+ A C C C + G D ++ + +
Sbjct: 899 QCECKPNVQGRRCDECKPETFG--LQSA-RGCIPCNCNSFGS-KSFDCEESGQCWCQPGV 954
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
G R H GY + G C C+C+ + CD ++GRCI
Sbjct: 955 T-----------GKKCDRCAH----GYFNFQEGG-----CTACDCSHLGNNCDPKTGRCI 994
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-----------NQGPC-VQLDDDQV 171
C NT G+ C +CA +G+++ T CK C C N G C
Sbjct: 995 CPPNTIGEKCSKCAPRTWGHSI---TTGCKACNCSSVGSLDFQCDLNMGQCKCHPKFSGA 1051
Query: 172 VCSECPRGY 180
C+EC RG+
Sbjct: 1052 KCTECTRGH 1060
Score = 138 (53.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 48/159 (30%), Positives = 69/159 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI C NT G NCE C G++ +G + + PC PC D V +L N +
Sbjct: 341 CINCTRNTAGINCETCIDGFFRP--KGVSPNYPR-PCQ---PC---HCDPVGSL-NEVCV 390
Query: 64 RIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGG--AFSRCVPCNCNGHADIC-DAE 118
+ + + RGLA H + G + + G + C PCNC+G D
Sbjct: 391 KDEK----HARRGLA-PGSCHCKPGFRGVSCDRCARGYIGYPDCKPCNCSGAGSTNEDPC 445
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
G C C++N G +C RC G++ N E C +C C
Sbjct: 446 FGPCNCKENVEGGDCSRCKFGFF-NLQEDNHKGCDECFC 483
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 44/174 (25%), Positives = 69/174 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGP-CVQLDDDQVSNLG 58
RC C+ NT GD+C++C G++ ++C+ C C + C D+ V+
Sbjct: 269 RCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKSECEACNCHGKAEECYY--DENVARRN 326
Query: 59 NRTRIRIKSALGG---NRTRGLA-LTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
I K GG N TR A + +T + G+ + R C PC+C+ G
Sbjct: 327 RSLNIHGKYIGGGVCINCTRNTAGINCETC--IDGFFRPKGVSPNYPRPCQPCHCDPVGS 384
Query: 112 A-DICDAESGRCICQDNTGGDNCERCARGYY-GNALEGAV--TDCKQCPCPNQG 161
++C + G +C+ RG G + DCK C C G
Sbjct: 385 LNEVCVKDEKHARRGLAPGSCHCKPGFRGVSCDRCARGYIGYPDCKPCNCSGAG 438
Score = 113 (44.8 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ C+D+T G C++C G+YG+ +G DC+ C CP P
Sbjct: 736 CLNCKDHTDGPYCDKCLPGFYGDPTKGTSDDCQPCACPLNSP 777
Score = 109 (43.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 31/104 (29%), Positives = 45/104 (43%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC------NGHADICDAE-SGRCICQD---NTGGDNCERC 136
L G++ +PT G + C PC C N + C + S IC + G CERC
Sbjct: 752 LPGFYGDPTKGTS-DDCQPCACPLNSPSNNFSPTCHMDRSLGLICDECPVGYSGQRCERC 810
Query: 137 ARGYYGN-ALEGAVTDCKQCPCPNQ------GPCVQLDDDQVVC 173
A GY+G ++ G C+ C C + G C L ++C
Sbjct: 811 AEGYFGQPSVPGG--SCQPCQCNDNLDFSIPGSCDSLSGSCLIC 852
Score = 84 (34.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 121 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVVCSECPR 178
RC C G CERCA GY G+ + C++C C G V D +C+ C
Sbjct: 1456 RCTACPRGYEGKYCERCAPGYAGSPSSPGGS-CQECECDPHGSLPVPCDPVMGICT-CRP 1513
Query: 179 GYGGEK 184
G G K
Sbjct: 1514 GATGPK 1519
Score = 76 (31.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 7 CQDNTGGDNCERCARGYYGN-ALEGAVTDCKQCPC 40
C G CERCA GY+G ++ G C+ C C
Sbjct: 798 CPVGYSGQRCERCAEGYFGQPSVPGG--SCQPCQC 830
Score = 76 (31.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
F C C++N G +C RC G++ N E C +C C
Sbjct: 446 FGPCNCKENVEGGDCSRCKFGFF-NLQEDNHKGCDECFC 483
Score = 72 (30.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 121 RCICQDNTGGDNCERCARGYY------GNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVC 173
+C C G +CE C G+Y G GA C C C G D + +C
Sbjct: 1342 KCDCPPGYSGLSCETCTPGFYRLRSEPGGRTPGATLGTCVPCQC--HGHSNLCDPETSIC 1399
Query: 174 SECPRGYGGE 183
C G+
Sbjct: 1400 QNCQHHTAGD 1409
Score = 59 (25.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 35/138 (25%), Positives = 48/138 (34%)
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
R++S GG RT G L Q G H S C C + D C+ RC
Sbjct: 1363 RLRSEPGG-RTPGATLGTCVPCQCHG--HSNLCDPETSICQNCQHHTAGDFCE----RCA 1415
Query: 124 C--QDNTGG--DNCERCA-------RGYYGNALEGAVTD--CKQCPCPNQGPCVQLDDDQ 170
G ++C++CA + + + + D C CP +G
Sbjct: 1416 LGYYGIVKGLPNDCQQCACPLISSSNNFSPSCIMEGLDDYRCTACPRGYEGK-------- 1467
Query: 171 VVCSECPRGYGGEKMSPG 188
C C GY G SPG
Sbjct: 1468 -YCERCAPGYAGSPSSPG 1484
Score = 44 (20.5 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 5 CICQDNTGGDNCERC---ARGYYGNALEGAVTDCKQCPC 40
C C G +CE C R G G C+ C C
Sbjct: 687 CQCPPGYTGSSCESCWPRHRRVNGTIFGGL---CEPCQC 722
Score = 39 (18.8 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
G CE C + + + +C C GP
Sbjct: 714 GGLCEPCQCFGHAESCDDTTGECLNCKDHTDGP 746
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 269 (99.8 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 43/97 (44%), Positives = 56/97 (57%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY E GG ++ CVPC CN H CD +G C+C +T G +CERC G+YGN G
Sbjct: 690 GYKREMPQGGPYASCVPCTCNQHGT-CDPNTGICVCSHHTEGPSCERCLPGFYGNPFAGQ 748
Query: 149 VTDCKQCPCPNQGPCVQLDDD-QVVCSECPRGYGGEK 184
DC+ CPCP Q C + + +VVC+ CP G G +
Sbjct: 749 ADDCQPCPCPGQSACTTIPESREVVCTHCPPGQRGRR 785
Score = 253 (94.1 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 63/186 (33%), Positives = 82/186 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G +CERC G+YGN G DC+ CPCP Q C + + + +
Sbjct: 722 CVCSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPCPGQSACTTIPESR--------EVV 773
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR---CVPCNCNGHADI-----CD 116
G R R + G+ +P G F C C C+G+ D CD
Sbjct: 774 CTHCPPGQRGRRCEVCDD------GFFGDPL--GLFGHPQPCHQCQCSGNVDPNAVGNCD 825
Query: 117 AESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCV-QLDDDQVV- 172
SG C+ C NT GD+CE C G+YG+AL D C C C QG Q+ D V
Sbjct: 826 PLSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTG 885
Query: 173 -CSECP 177
CS P
Sbjct: 886 QCSCLP 891
Score = 147 (56.8 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 48/180 (26%), Positives = 68/180 (37%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C CQ NT G +CERC + + A +C C C + D + + G+
Sbjct: 290 CRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHECLPCNCSGRSEECTFDRELFRSTGHG 349
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDA 117
R + T G R Q YH +P C PC+C + CD
Sbjct: 350 GRCHHCR----DHTAGPHCER---CQENFYHWDPRMP-----CQPCDCQSAGSLHLQCD- 396
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
++G C C+ G C+RC G++ + EG C+ C C P LD CP
Sbjct: 397 DTGTCACKPTVTGWKCDRCLPGFHSLS-EGG---CRPCTC---NPAGSLDTCDPRSGRCP 449
Score = 135 (52.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 35/101 (34%), Positives = 45/101 (44%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNA 144
L G+H + GG C PC CN G D CD SGRC C++N G+ C+RC G + N
Sbjct: 416 LPGFH-SLSEGG----CRPCTCNPAGSLDTCDPRSGRCPCKENVEGNLCDRCRPGTF-NL 469
Query: 145 LEGAVTDCKQCPCPNQGP-CVQLDDDQV--VCSECPRGYGG 182
C C C C QV + S+ +G G
Sbjct: 470 QPHNPAGCSSCFCYGHSKVCASTAQFQVHHILSDFHQGAEG 510
Score = 132 (51.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/160 (25%), Positives = 63/160 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALE--GAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C G CE C G++G+ L G C QC C +D + V N
Sbjct: 777 CPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGN-----VDPNAVGNC------- 824
Query: 65 IKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADI-----CDA 117
L G+ R L T H + G++ + +C+PC+C+ + CD
Sbjct: 825 --DPLSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDP 882
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+G+C C + +C RC G++ L+ C+ C C
Sbjct: 883 VTGQCSCLPHVTARDCSRCYPGFFD--LQPG-RGCRSCKC 919
Score = 130 (50.8 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 99 AFSRCVPCNCNGHADIC--DAE-------SGRCI-CQDNTGGDNCERCARGYYGNALEGA 148
A C+PCNC+G ++ C D E GRC C+D+T G +CERC +Y +
Sbjct: 320 AAHECLPCNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYH--WDPR 377
Query: 149 VTDCKQCPCPNQGPC-VQLDDDQV-VCSECPRGYGGEKMSPG 188
+ C+ C C + G +Q DD C G+ ++ PG
Sbjct: 378 MP-CQPCDCQSAGSLHLQCDDTGTCACKPTVTGWKCDRCLPG 418
Score = 115 (45.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C C C+ D C ++G+C C+ G C+RC G++G +++G C+ C C
Sbjct: 914 CRSCKCHPLGSQEDQCHPKTGQCTCRPGVTGQACDRCQLGFFGFSIKG----CRACRCSP 969
Query: 160 QGPCVQLDDDQVVCSECPRGYGGEK 184
G + C C G+ G K
Sbjct: 970 LGAASAQCHENGTCV-CRPGFEGYK 993
Score = 95 (38.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 97 GGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
G + C C C+ G A E+G C+C+ G C+RC ++ A +G T C+Q
Sbjct: 956 GFSIKGCRACRCSPLGAASAQCHENGTCVCRPGFEGYKCDRCHDNFFLTA-DG--THCQQ 1012
Query: 155 CP 156
CP
Sbjct: 1013 CP 1014
Score = 88 (36.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/68 (32%), Positives = 25/68 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C C G CE CA GY +G C C C G C + VCS G
Sbjct: 673 CSCPTGYTGQFCESCAPGYKREMPQGGPYASCVPCTCNQHGTC-DPNTGICVCSHHTEGP 731
Query: 181 GGEKMSPG 188
E+ PG
Sbjct: 732 SCERCLPG 739
Score = 79 (32.9 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDD 51
RC C+D+T G +CERC +Y + + C+ C C + G +Q DD
Sbjct: 351 RCHHCRDHTAGPHCERCQENFYH--WDPRMP-CQPCDCQSAGSLHLQCDD 397
Score = 75 (31.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 15/43 (34%), Positives = 16/43 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPC 46
C C G CE CA GY +G C C C G C
Sbjct: 673 CSCPTGYTGQFCESCAPGYKREMPQGGPYASCVPCTCNQHGTC 715
Score = 70 (29.7 bits), Expect = 4.4e-26, Sum P(2) = 4.4e-26
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDDDQVSNL 57
RC C++N G+ C+RC G + N C C C C QV ++
Sbjct: 447 RCPCKENVEGNLCDRCRPGTF-NLQPHNPAGCSSCFCYGHSKVCASTAQFQVHHI 500
Score = 52 (23.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + +C RC G++ L+ C+ C C
Sbjct: 886 QCSCLPHVTARDCSRCYPGFFD--LQPG-RGCRSCKC 919
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 264 (98.0 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
FS C CNCNGH+D CD E+G C CQ NT G +CERC G+YG++ G+ +DCK CPCP
Sbjct: 702 FSTCERCNCNGHSDTCDPETGMCNCQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPCPA 761
Query: 160 QGPCVQLDD-DQVVCSECPRGYGGEK 184
C + ++VVC+ CP G G++
Sbjct: 762 GATCAVVPKTNEVVCTNCPTGTTGKR 787
Score = 174 (66.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 57/186 (30%), Positives = 82/186 (44%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
C+ C NT G C+RC +G+YG+A V D CK C C G + S + +
Sbjct: 833 CLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDR--QTACSQVTGQCP 890
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHAD-ICDAES 119
+ + NR G +L G+++ + G C CNCN G + CD S
Sbjct: 891 C-LPHVI--NRDCGAC-------EL-GFYNLQSGKG----CERCNCNPIGSTNGQCDIVS 935
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDDDQVVCSECPR 178
G+C CQ G +CERC ++G + G CK C C +G Q +D C C
Sbjct: 936 GQCECQPGVTGQHCERCEVNFFGFSSSG----CKPCDCDPEGSESAQCKEDGR-C-HCRP 989
Query: 179 GYGGEK 184
G+ G +
Sbjct: 990 GFVGSR 995
Score = 156 (60.0 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 48/185 (25%), Positives = 74/185 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNAL--EGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C T G CE C G++G+ L +G V C+ C C N +D + V N +
Sbjct: 779 CPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNN-----IDPNAVGNCNRESGEC 833
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-----CDAES 119
+K T G+ R G++ + + +C PC C+ + + C +
Sbjct: 834 LKCIYN---TAGVFCDRCKQ----GFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVT 886
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLDDDQVVCSECPR 178
G+C C + +C C G+Y N G C++C C P Q D C EC
Sbjct: 887 GQCPCLPHVINRDCGACELGFY-NLQSGK--GCERCNCNPIGSTNGQCDIVSGQC-ECQP 942
Query: 179 GYGGE 183
G G+
Sbjct: 943 GVTGQ 947
Score = 149 (57.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 51/185 (27%), Positives = 69/185 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G +C C Y A + C C C + D + G+
Sbjct: 289 CNCKHNTEGADCNVCKPFYNDRPWRRATAENPNECLPCNCNGKSAECYFDPELYRATGHG 348
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDA 117
R A + T G R L Y+ E SG RC+ C CN + CD
Sbjct: 349 GHCR-NCA---DNTDGPKCERC----LANYYRE-ASG---QRCLSCGCNPVGSLSTQCD- 395
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
+GRC C+ GD C+RC GY+ + G C+ C C G + D C +C
Sbjct: 396 NTGRCSCKPGVMGDKCDRCQPGYHSLSEAG----CRPCSCNPAGSTQECDVQTGRC-QCK 450
Query: 178 RGYGG 182
G
Sbjct: 451 ENVDG 455
Score = 140 (54.3 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C CQ NT G +CERC G+YG++ G+ +DCK CPCP C
Sbjct: 724 CNCQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPCPAGATC 765
Score = 137 (53.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/71 (39%), Positives = 36/71 (50%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
GYH +G C PC+CN G CD ++GRC C++N G NC+RC GY+ N
Sbjct: 417 GYHSLSEAG-----CRPCSCNPAGSTQECDVQTGRCQCKENVDGFNCDRCKLGYF-NLDP 470
Query: 147 GAVTDCKQCPC 157
C C C
Sbjct: 471 QNPQGCTPCFC 481
Score = 83 (34.3 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 50
RC C+ GD C+RC GY+ + G C+ C C G + D
Sbjct: 399 RCSCKPGVMGDKCDRCQPGYHSLSEAG----CRPCSCNPAGSTQECD 441
Score = 79 (32.9 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC C++N G NC+RC GY+ N C C C
Sbjct: 446 RCQCKENVDGFNCDRCKLGYF-NLDPQNPQGCTPCFC 481
Score = 75 (31.5 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 121 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC--------PNQGPC-VQLDDDQ 170
+C C G +CE+C +G+ + E + C++C C P G C Q +
Sbjct: 673 KCTCPQGYLGQHCEQCDQGFRRSRPELRRFSTCERCNCNGHSDTCDPETGMCNCQHNTAG 732
Query: 171 VVCSECPRGYGGE 183
+ C C G+ G+
Sbjct: 733 LSCERCKDGFYGD 745
Score = 54 (24.1 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 103 CVPCNCNGHADICDAESG 120
C PC C H+ +C++ G
Sbjct: 476 CTPCFCFQHSTVCESADG 493
Score = 46 (21.3 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CI +D D +RC + A V C P + CVQ
Sbjct: 24 CIDED----DRPQRCMPEFVNAAFNATVVATNTCGSPPEEFCVQ 63
Score = 45 (20.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 22/92 (23%), Positives = 32/92 (34%)
Query: 103 CVPCNCNGHADICD-AESGRC-ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
C+ C N CD + G + D C+ C YG T C Q Q
Sbjct: 833 CLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTV--DRQTACSQVT--GQ 888
Query: 161 GPCVQ--LDDDQVVCSECPRGYGGEKMSPGAQ 190
PC+ ++ D C C G+ + G +
Sbjct: 889 CPCLPHVINRD---CGACELGFYNLQSGKGCE 917
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 264 (98.0 bits), Expect = 8.4e-27, Sum P(2) = 8.4e-27
Identities = 43/97 (44%), Positives = 57/97 (58%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY E GG ++ CVPC CN H CD +G C+C +T G +CERC G+YGN G
Sbjct: 697 GYKRETPLGGPYASCVPCICNQHGT-CDPNTGICLCGHHTEGPSCERCLPGFYGNPFTGQ 755
Query: 149 VTDCKQCPCPNQGPCVQLDDD-QVVCSECPRGYGGEK 184
DC+ CPCP Q C + + +VVC+ CP G G++
Sbjct: 756 ADDCQPCPCPGQSACTTMPESGEVVCTHCPPGQRGQR 792
Score = 253 (94.1 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 68/198 (34%), Positives = 88/198 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G +CERC G+YGN G DC+ CPCP Q C + + G +
Sbjct: 729 CLCGHHTEGPSCERCLPGFYGNPFTGQADDCQPCPCPGQSACTTMPES-----GE---VV 780
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDAE 118
G R + + G+ +P GA C PC C+G+ D CD
Sbjct: 781 CTHCPPGQRGQRCEICDD------GFFGDPLGLSGAPQPCRPCQCSGNVDPNAVGNCDPL 834
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCV--QLDDDQVV-- 172
+G C+ C NT G +CERC G+YG+AL D C C C N G V Q D V
Sbjct: 835 TGHCLRCLHNTTGAHCERCQEGFYGDALASLPEDKCVPCSC-NPGGSVGEQQPCDLVTGQ 893
Query: 173 CSECPRGYGGE--KMSPG 188
CS P G + SPG
Sbjct: 894 CSCLPHVTGRDCGHCSPG 911
Score = 174 (66.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 53/182 (29%), Positives = 75/182 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
C+ C NT G +CERC G+YG+AL D C C C N G V + Q +L
Sbjct: 838 CLRCLHNTTGAHCERCQEGFYGDALASLPEDKCVPCSC-NPGGSV--GEQQPCDLVTGQC 894
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC 122
+ G R G H Y +P G +C P D C ++G+C
Sbjct: 895 SCLPHVTG--RDCG-------HCSPGFYDLQPGRGCRSCKCHPLG--SQEDQCHPKTGQC 943
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C+ G +C+RC G++G ++ G C+ C C G + C C G+ G
Sbjct: 944 PCRPGVEGQSCDRCQLGFFGFSIRG----CRACRCSPLGAASAQCHENSTCV-CRPGFVG 998
Query: 183 EK 184
K
Sbjct: 999 YK 1000
Score = 145 (56.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 99 AFSRCVPCNCNGHADIC--DAE-------SGRCI-CQDNTGGDNCERCARGYYGNALEGA 148
A + C+PCNC+GH++ C D E GRC+ C+D+T G +CERC +Y
Sbjct: 326 AANECLPCNCSGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENFYR---WNP 382
Query: 149 VTDCKQCPCPNQGPC-VQLDDDQVV-CSECPRGYGGEKMSPG 188
C+ C C G +Q DD C G+ ++ PG
Sbjct: 383 QMPCQPCDCHPAGSLHLQCDDSGTCKCKPTVTGWKCDRCQPG 424
Score = 124 (48.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 26/68 (38%), Positives = 32/68 (47%)
Query: 92 HEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAV 149
H + GG C PC CN G CD SGRC C++N G+ C+RC G + N
Sbjct: 426 HSLSEGG----CRPCTCNSAGSLGTCDPRSGRCPCKENVEGNLCDRCRPGTF-NLQPHNP 480
Query: 150 TDCKQCPC 157
C C C
Sbjct: 481 AGCSSCFC 488
Score = 86 (35.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 97 GGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
G + C C C+ G A E+ C+C+ G C+RC ++ A G T C+Q
Sbjct: 963 GFSIRGCRACRCSPLGAASAQCHENSTCVCRPGFVGYKCDRCQDNFFPTA--GG-TYCQQ 1019
Query: 155 CP 156
CP
Sbjct: 1020 CP 1021
Score = 85 (35.0 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 21/68 (30%), Positives = 24/68 (35%)
Query: 122 CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C C G CE CA GY L G C C C G C + +C G
Sbjct: 680 CSCPSGYSGQFCESCAPGYKRETPLGGPYASCVPCICNQHGTC-DPNTGICLCGHHTEGP 738
Query: 181 GGEKMSPG 188
E+ PG
Sbjct: 739 SCERCLPG 746
Score = 82 (33.9 bits), Expect = 8.4e-27, Sum P(2) = 8.4e-27
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDD 51
RC+ C+D+T G +CERC +Y C+ C C G +Q DD
Sbjct: 357 RCLHCRDHTAGPHCERCQENFYR---WNPQMPCQPCDCHPAGSLHLQCDD 403
Score = 79 (32.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/43 (37%), Positives = 16/43 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQCPCPNQGPC 46
C C G CE CA GY L G C C C G C
Sbjct: 680 CSCPSGYSGQFCESCAPGYKRETPLGGPYASCVPCICNQHGTC 722
Score = 69 (29.3 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC C++N G+ C+RC G + N C C C
Sbjct: 453 RCPCKENVEGNLCDRCRPGTF-NLQPHNPAGCSSCFC 488
Score = 66 (28.3 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ G C+RC G++ + EG C+ C C + G
Sbjct: 407 CKCKPTVTGWKCDRCQPGFHSLS-EGG---CRPCTCNSAG 442
Score = 43 (20.2 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 103 CVPCNCNGHADICDA 117
C C C GH+ C A
Sbjct: 483 CSSCFCYGHSKACAA 497
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 229 (85.7 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 46/109 (42%), Positives = 58/109 (53%)
Query: 89 GYHHE--PTSGGAFSR-----CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGY 140
GYH P G R CVPCNCN H+D CD E+G+C+ C NT GD+C+ CA GY
Sbjct: 1333 GYHRGKLPEGDGRRPRPLLAPCVPCNCNNHSDTCDPETGKCLNCGHNTTGDHCDTCAPGY 1392
Query: 141 YGNALEGAVTDCKQCPCPNQGP------CVQLDDDQVVCSECPRGYGGE 183
YG + G+ +DC C CP+ P C+ D C C GY G+
Sbjct: 1393 YGK-VTGSASDCSPCTCPHSLPASYSPTCILEGDHDFRCDACFVGYEGQ 1440
Score = 218 (81.8 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 47/106 (44%), Positives = 56/106 (52%)
Query: 87 LTGYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNA 144
L GY+ G F C PC C+GHA CD G C CQ NT G++CERC G+YG
Sbjct: 679 LPGYYR--VDGILFGGICQPCECHGHAAECDVH-GVCFACQHNTTGEHCERCLPGFYGLP 735
Query: 145 LEGAVTDCKQCPCP------NQGPCVQLDD-DQVVCSECPRGYGGE 183
G DC+ C CP N P LDD D+VVC +C GY G+
Sbjct: 736 SRGTPGDCQPCACPLSTASNNFSPTCHLDDGDEVVCDQCAPGYMGD 781
Score = 172 (65.6 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 44/137 (32%), Positives = 61/137 (44%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C+ C NT GD+C+ CA GYYG + G+ +DC C CP+ P L
Sbjct: 1372 KCLNCGHNTTGDHCDTCAPGYYGK-VTGSASDCSPCTCPHSLPASY---SPTCILEGDHD 1427
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAES 119
R + G G R + +GY+ P G S C C+C+ H + CD S
Sbjct: 1428 FRCDACFVGYE--GQYCERCS----SGYYGNPRMPG--STCQRCDCSPHGSVHSDCDRGS 1479
Query: 120 GRCICQDNTGGDNCERC 136
G+CIC+ G C C
Sbjct: 1480 GQCICRPGATGLRCGDC 1496
Score = 163 (62.4 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 33/89 (37%), Positives = 45/89 (50%)
Query: 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C PC+C + CD E+G C+C +T G CE CA G++G+ LE C+ C C + G
Sbjct: 949 CTPCDCAHTQNTCDPETGECVCPPHTRGAACEECADGHWGHDLE---LGCQACNCSSVGA 1005
Query: 163 CVQLDDDQVVCSECPRGYGG---EKMSPG 188
Q D C +GG E+ SPG
Sbjct: 1006 ASQRCDVVTGHCRCKPAFGGRTCEQCSPG 1034
Score = 161 (61.7 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 40/112 (35%), Positives = 52/112 (46%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHA--DICDAESGRCICQDNTGGDNCERCARGYYGNA 144
L GY+ T G C+PCNC+ + D C E G C+C G+ C+RCARG+Y
Sbjct: 891 LYGYYGLETGLG----CLPCNCSAGSLSDDCTPE-GHCLCVPGVAGEKCDRCARGFYSYQ 945
Query: 145 LEGAVTDCK----QCPC-PNQGPCVQLDDDQ-VVCSECPRGYGGEKMSPGAQ 190
+G T C Q C P G CV + C EC G+ G + G Q
Sbjct: 946 -DGGCTPCDCAHTQNTCDPETGECVCPPHTRGAACEECADGHWGHDLELGCQ 996
Score = 155 (59.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 58/186 (31%), Positives = 76/186 (40%)
Query: 7 CQDNTGGDNCERCARGYYGN-ALEGAVTDCKQCPCPNQGPCVQLDD-DQVSNLGNRTRIR 64
C GD CERCA GYYGN + G C C C ++ D V+ G R
Sbjct: 774 CAPGYMGDWCERCADGYYGNPTVPG--DSCVACNCSGNVDLLEPGSCDSVT--GECLR-- 827
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD---ICDAESGR 121
LG T G R G++ + + C C C+G +C E+G
Sbjct: 828 ---CLGN--TDGPHCERCAD----GFYGDAVTA---KNCRACECHGQGSLSAVCHPETGL 875
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD---QVVCSECPR 178
C C+ + G C++C GYYG LE + C C C + G L DD + C C
Sbjct: 876 CECKPHVTGQRCDQCLYGYYG--LETGL-GCLPCNC-SAG---SLSDDCTPEGHCL-CVP 927
Query: 179 GYGGEK 184
G GEK
Sbjct: 928 GVAGEK 933
Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 53/182 (29%), Positives = 69/182 (37%)
Query: 1 MFRRCICQDNTGGDNCERCARGYY-GNALEG-------AVTDCKQCPCPNQGPCVQLDDD 52
+ +C+C T G +C+ CA GY+ G EG + C C C N +
Sbjct: 1312 LLEKCVCPPGTAGLSCQDCAPGYHRGKLPEGDGRRPRPLLAPCVPCNCNNHSDTCDPETG 1371
Query: 53 QVSNLG-NRTRIRIKSALGG--NRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN 109
+ N G N T + G + G A T H P S +S C
Sbjct: 1372 KCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSP---CTCPHSLPAS---YSPT--CILE 1423
Query: 110 GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
G D CDA C G CERC+ GYYGN T C++C C G V D
Sbjct: 1424 GDHDFRCDA------CFVGYEGQYCERCSSGYYGNPRMPGST-CQRCDCSPHGS-VHSDC 1475
Query: 169 DQ 170
D+
Sbjct: 1476 DR 1477
Score = 131 (51.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 42/154 (27%), Positives = 60/154 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G CE CA G++G+ LE C+ C C + G Q D + R
Sbjct: 968 CVCPPHTRGAACEECADGHWGHDLE---LGCQACNCSSVGAASQRCDVVTGHC------R 1018
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCIC 124
K A GG + + +P G + C+ C E+G C C
Sbjct: 1019 CKPAFGGRTCEQCSPGYKGFPDCMACDCDPR--GTLADT--CDQEQGLCSCAQETGACSC 1074
Query: 125 QDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 157
++N G C C G + AL+ A C C C
Sbjct: 1075 KENVAGPQCGECRAGTF--ALDKADPRGCTPCFC 1106
Score = 124 (48.7 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 30/83 (36%), Positives = 39/83 (46%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C CNC+ G A CD +G C C+ GG CE+C+ GY G DC C C
Sbjct: 995 CQACNCSSVGAASQRCDVVTGHCRCKPAFGGRTCEQCSPGYKG------FPDCMACDCDP 1048
Query: 160 QGPCVQL-DDDQVVCSECPRGYG 181
+G D +Q +CS C + G
Sbjct: 1049 RGTLADTCDQEQGLCS-CAQETG 1070
Score = 124 (48.7 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 26/72 (36%), Positives = 35/72 (48%)
Query: 106 CNCNGHADICDAESG----RCICQDNTGGDNCERCARGYYGNALE-GAVTD---CKQCPC 157
C C GHA C + G +C C+ NT GD C RC GY+ G V+ C++C C
Sbjct: 271 CICYGHASSCPWDEGTKKFQCQCEHNTCGDRCNRCCPGYHQQPWRPGTVSSGNTCEECNC 330
Query: 158 PNQGPCVQLDDD 169
N+ D+D
Sbjct: 331 HNKAKDCYYDED 342
Score = 121 (47.7 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 25/55 (45%), Positives = 30/55 (54%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP------NQGPCVQLDD-DQV 54
CQ NT G++CERC G+YG G DC+ C CP N P LDD D+V
Sbjct: 715 CQHNTTGEHCERCLPGFYGLPSRGTPGDCQPCACPLSTASNNFSPTCHLDDGDEV 769
Score = 112 (44.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/106 (33%), Positives = 44/106 (41%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC------NGHADICDAESG-RCIC-QDNTG--GDNCERC 136
L G++ P S G C PC C N + C + G +C Q G GD CERC
Sbjct: 728 LPGFYGLP-SRGTPGDCQPCACPLSTASNNFSPTCHLDDGDEVVCDQCAPGYMGDWCERC 786
Query: 137 ARGYYGN-ALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
A GYYGN + G C C C ++ V EC R G
Sbjct: 787 ADGYYGNPTVPG--DSCVACNCSGNVDLLEPGSCDSVTGECLRCLG 830
Score = 110 (43.8 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 35/116 (30%), Positives = 52/116 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE-GAVTD---CKQCPCPNQGPCVQLDDDQVSNLGN 59
+C C+ NT GD C RC GY+ G V+ C++C C N+ D+D V+N
Sbjct: 290 QCQCEHNTCGDRCNRCCPGYHQQPWRPGTVSSGNTCEECNCHNKAKDCYYDED-VAN--Q 346
Query: 60 RTRIRIKSAL-GGNRTRG-LALTRQTHYQ--LTGYHHEPTSGGAFSR--CVPCNCN 109
R + I GG G L T + + + GY+ P + C PC+C+
Sbjct: 347 RRSLNIAGQFRGGGVCIGCLQNTMGVNCETCVDGYYR-PHGVSPYEDHPCRPCDCD 401
Score = 96 (38.9 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 38/123 (30%), Positives = 52/123 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI C NT G NCE C GYY G V+ + PC PC D D V +L + +
Sbjct: 362 CIGCLQNTMGVNCETCVDGYYRP--HG-VSPYEDHPCR---PC---DCDPVGSLNS---V 409
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-------CVPCNCNGHADICD 116
IK L + RG + G H + G ++ C C C G +D+C+
Sbjct: 410 CIKDDLHSDLHRGTCFISVLE-NVEGSHCDRCKPGFYNLEEKNPQGCSECFCFGVSDVCE 468
Query: 117 AES 119
+ S
Sbjct: 469 SLS 471
Score = 92 (37.4 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCK----QCPC-PNQGPCV 47
C+C G+ C+RCARG+Y +G T C Q C P G CV
Sbjct: 923 CLCVPGVAGEKCDRCARGFYSYQ-DGGCTPCDCAHTQNTCDPETGECV 969
Score = 85 (35.0 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 27/87 (31%), Positives = 37/87 (42%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNA 144
+GY+ P G S C C+C+ H + CD SG+CIC+ G C C +
Sbjct: 1447 SGYYGNPRMPG--STCQRCDCSPHGSVHSDCDRGSGQCICRPGATGLRCGDCEPRHI--L 1502
Query: 145 LEGAVTDCKQCPCPNQGPCVQLDDDQV 171
+E +DC C DDD V
Sbjct: 1503 VE---SDCVSC-----------DDDCV 1515
Score = 78 (32.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/68 (32%), Positives = 26/68 (38%)
Query: 118 ESGRCICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSE 175
E C C G +CE C GYY L G + C+ C C G + D V C
Sbjct: 660 EVEHCECPQGYAGISCESCLPGYYRVDGILFGGI--CQPCEC--HGHAAECDVHGV-CFA 714
Query: 176 CPRGYGGE 183
C GE
Sbjct: 715 CQHNTTGE 722
Score = 67 (28.6 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 5 CICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPC 40
C C G +CE C GYY L G + C+ C C
Sbjct: 664 CECPQGYAGISCESCLPGYYRVDGILFGGI--CQPCEC 699
Score = 47 (21.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 103 CVPCNCNGHADICDAESG 120
C PC C G + +C G
Sbjct: 1101 CTPCFCFGLSQLCSEAQG 1118
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/99 (20%), Positives = 30/99 (30%)
Query: 91 HHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVT 150
+H T +C+ C N D CD + + +C C + A
Sbjct: 1361 NHSDTCDPETGKCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCTCPHSLPASYSPTC 1420
Query: 151 DCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
+ C + Q C C GY G PG+
Sbjct: 1421 ILEGDHDFRCDACFVGYEGQY-CERCSSGYYGNPRMPGS 1458
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 238 (88.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 49/109 (44%), Positives = 63/109 (57%)
Query: 89 GYHHEPTS-GGAFSR-----CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYY 141
G++ P+ G A +R CVPC C+GH+ +CD E+ +C CQ +T GD CERCA GYY
Sbjct: 1360 GFYRLPSEPGSAAARPALGPCVPCQCHGHSSLCDPETSKCQNCQHHTAGDFCERCALGYY 1419
Query: 142 GNALEGAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGGE 183
G + G DC+QC CP N P CV D C+ CPRGY G+
Sbjct: 1420 G-IVRGLPNDCQQCACPLISSSNNFSPSCVLEGLDDYRCTACPRGYEGQ 1467
Score = 206 (77.6 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 39/102 (38%), Positives = 54/102 (52%)
Query: 92 HEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAV 149
H +G F C PC C GHA+ CD +G C+ C+D+TGG +C +C G+YG+ +G
Sbjct: 705 HRRVNGTVFGGICEPCQCFGHAESCDDLTGECLNCKDHTGGPHCNQCLPGFYGDPSKGTS 764
Query: 150 TDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC C CP N P L+ ++C CP GY G +
Sbjct: 765 EDCLPCACPLSIPSNNFSPTCHLERGLGLMCDACPAGYTGPR 806
Score = 173 (66.0 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 55/198 (27%), Positives = 86/198 (43%)
Query: 3 RRC-ICQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPC-PN-QGP-CVQLDDDQ 53
RRC +C D GD NC+ C + E QC C PN QG C + +
Sbjct: 859 RRCELCADGYFGDAVEAKNCQPCGCHVNSSLSESCHARTGQCECKPNVQGRRCDECKPET 918
Query: 54 VSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCN 107
R + K G+++ + Q Q +TG + + G F+ C C+
Sbjct: 919 FGLQSGRGCVPCKCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACD 978
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQL 166
C+ + CD ++G+CIC NT G+ C +C+ +G+++ +T CK C C G Q
Sbjct: 979 CSHLGNNCDPKTGQCICPPNTVGEKCSKCSPNTWGHSI---ITGCKACNCSTVGSLDFQC 1035
Query: 167 DDDQVVCSECPRGYGGEK 184
+ + CS C + G K
Sbjct: 1036 NINTGQCS-CHPKFSGAK 1052
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/155 (30%), Positives = 64/155 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ +T GD CERCA GYYG + G DC+QC CP +S+ N + +
Sbjct: 1402 CQHHTAGDFCERCALGYYG-IVRGLPNDCQQCACP-----------LISSSNNFSPSCVL 1449
Query: 67 SALGGNRTRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
L R + Y GY P S G C C C+ + CD +G
Sbjct: 1450 EGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGG--TCQECECDPQGSLPLPCDPATG 1507
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+ G C+ C G+ A +G+ +C C
Sbjct: 1508 LCTCRPGATGPKCDGCQPGH---ARQGS--ECVFC 1537
Score = 150 (57.9 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRC-ICQDNTGGDNCERCARGYYG 142
GY +P+ G C PC CN + D CD+ SG C IC+ T G CE CA GY+G
Sbjct: 813 GYFGQPSVPGG--SCQPCQCNDNLDFSIPGSCDSLSGSCRICKPGTAGRRCELCADGYFG 870
Query: 143 NALEGAVTDCKQCPC 157
+A+E +C+ C C
Sbjct: 871 DAVEAK--NCQPCGC 883
Score = 140 (54.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 49/159 (30%), Positives = 68/159 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI C NT G NCE C G++ +G V+ PC PC D V +L N +
Sbjct: 341 CINCTQNTAGINCETCIDGFFRP--KG-VSPSYPRPCQ---PC---HCDPVGSL-NEVCV 390
Query: 64 RIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGG--AFSRCVPCNCNGHADIC-DAE 118
+ + RGLA H + G + + G + C PCNC+G D
Sbjct: 391 KDEK----RARRGLA-PGSCHCKPGFRGVSCDRCARGYTGYPDCKPCNCSGAGSTNEDPC 445
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
G C C++N G +C RC G++ N E C +C C
Sbjct: 446 FGPCNCKENVEGGDCGRCKAGFF-NLQEDNHKGCDECFC 483
Score = 123 (48.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 45/174 (25%), Positives = 71/174 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGP-CVQLDDDQVSNLG 58
RC C+ NT GD+C++C G++ T+C+ C C + C D+ V+
Sbjct: 269 RCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYY--DENVARRN 326
Query: 59 NRTRIRIKSALGG---NRTRGLA-LTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
I K GG N T+ A + +T + G+ ++ R C PC+C+ G
Sbjct: 327 LSLNIHGKYIGGGVCINCTQNTAGINCETC--IDGFFRPKGVSPSYPRPCQPCHCDPVGS 384
Query: 112 A-DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVT---DCKQCPCPNQG 161
++C + R G +C+ RG + T DCK C C G
Sbjct: 385 LNEVCVKDEKRARRGLAPGSCHCKPGFRGVSCDRCARGYTGYPDCKPCNCSGAG 438
Score = 112 (44.5 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ C+D+TGG +C +C G+YG+ +G DC C CP
Sbjct: 736 CLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCACP 773
Score = 98 (39.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 100 FSRCVPCNC--NGHAD-ICDAESGRCICQDNTG---------GDNCERCARGYYGNALEG 147
+ C PC C G D CD E+ +C C D TG G +C+RC G +G +
Sbjct: 1063 YPHCSPCECFLPGTDDRTCDPETKKCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKN 1122
Query: 148 AVTDCKQCPC 157
+ C QC C
Sbjct: 1123 PL-GCSQCYC 1131
Score = 92 (37.4 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
IC+ T G CE CA GY+G+A+E +C+ C C
Sbjct: 851 ICKPGTAGRRCELCADGYFGDAVEAK--NCQPCGC 883
Score = 88 (36.0 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 25/72 (34%), Positives = 32/72 (44%)
Query: 121 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVVCSECPR 178
RC C G CERC+ GY G+ T C++C C QG + D +C+ C
Sbjct: 1456 RCTACPRGYEGQYCERCSAGYTGSPRSPGGT-CQECECDPQGSLPLPCDPATGLCT-CRP 1513
Query: 179 GYGGEKMSPGAQ 190
G G K G Q
Sbjct: 1514 GATGPKCD-GCQ 1524
Score = 76 (31.8 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
F C C++N G +C RC G++ N E C +C C
Sbjct: 446 FGPCNCKENVEGGDCGRCKAGFF-NLQEDNHKGCDECFC 483
Score = 69 (29.3 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 20/70 (28%), Positives = 26/70 (37%)
Query: 121 RCICQDNTGGDNCERCARGYY------GNAL-EGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
RC C G +CE C G+Y G+A A+ C C C G D + C
Sbjct: 1342 RCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQC--HGHSSLCDPETSKC 1399
Query: 174 SECPRGYGGE 183
C G+
Sbjct: 1400 QNCQHHTAGD 1409
Score = 50 (22.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 27/102 (26%), Positives = 38/102 (37%)
Query: 101 SRCVPCNCNGHADICDAESGRCIC--QDNTGG--DNCERCARGYYGNA--------LEGA 148
S+C C + D C+ RC G ++C++CA ++ LEG
Sbjct: 1397 SKCQNCQHHTAGDFCE----RCALGYYGIVRGLPNDCQQCACPLISSSNNFSPSCVLEG- 1451
Query: 149 VTD--CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
+ D C CP +G C C GY G SPG
Sbjct: 1452 LDDYRCTACPRGYEGQ---------YCERCSAGYTGSPRSPG 1484
Score = 47 (21.6 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 5 CICQDNTGGDNCERC---ARGYYGNALEGAVTDCKQCPC 40
C C G +CE C R G G C+ C C
Sbjct: 687 CQCPPGYSGSSCESCWPRHRRVNGTVFGGI---CEPCQC 722
Score = 47 (21.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 12/37 (32%), Positives = 13/37 (35%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
C CP GP C C GY G+ PG
Sbjct: 795 CDACPAGYTGPR---------CDRCAEGYFGQPSVPG 822
Score = 38 (18.4 bits), Expect = 8.5e-19, Sum P(2) = 8.5e-19
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQ 48
G CE C + + + +C C GP C Q
Sbjct: 714 GGICEPCQCFGHAESCDDLTGECLNCKDHTGGPHCNQ 750
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 238 (88.8 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 49/109 (44%), Positives = 63/109 (57%)
Query: 89 GYHHEPTS-GGAFSR-----CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYY 141
G++ P+ G A +R CVPC C+GH+ +CD E+ +C CQ +T GD CERCA GYY
Sbjct: 1383 GFYRLPSEPGSAAARPALGPCVPCQCHGHSSLCDPETSKCQNCQHHTAGDFCERCALGYY 1442
Query: 142 GNALEGAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGGE 183
G + G DC+QC CP N P CV D C+ CPRGY G+
Sbjct: 1443 G-IVRGLPNDCQQCACPLISSSNNFSPSCVLEGLDDYRCTACPRGYEGQ 1490
Score = 206 (77.6 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 39/102 (38%), Positives = 54/102 (52%)
Query: 92 HEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAV 149
H +G F C PC C GHA+ CD +G C+ C+D+TGG +C +C G+YG+ +G
Sbjct: 728 HRRVNGTVFGGICEPCQCFGHAESCDDLTGECLNCKDHTGGPHCNQCLPGFYGDPSKGTS 787
Query: 150 TDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC C CP N P L+ ++C CP GY G +
Sbjct: 788 EDCLPCACPLSIPSNNFSPTCHLERGLGLMCDACPAGYTGPR 829
Score = 173 (66.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 55/198 (27%), Positives = 86/198 (43%)
Query: 3 RRC-ICQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPC-PN-QGP-CVQLDDDQ 53
RRC +C D GD NC+ C + E QC C PN QG C + +
Sbjct: 882 RRCELCADGYFGDAVEAKNCQPCGCHVNSSLSESCHARTGQCECKPNVQGRRCDECKPET 941
Query: 54 VSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCN 107
R + K G+++ + Q Q +TG + + G F+ C C+
Sbjct: 942 FGLQSGRGCVPCKCNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACD 1001
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQL 166
C+ + CD ++G+CIC NT G+ C +C+ +G+++ +T CK C C G Q
Sbjct: 1002 CSHLGNNCDPKTGQCICPPNTVGEKCSKCSPNTWGHSI---ITGCKACNCSTVGSLDFQC 1058
Query: 167 DDDQVVCSECPRGYGGEK 184
+ + CS C + G K
Sbjct: 1059 NINTGQCS-CHPKFSGAK 1075
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/155 (30%), Positives = 64/155 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ +T GD CERCA GYYG + G DC+QC CP +S+ N + +
Sbjct: 1425 CQHHTAGDFCERCALGYYG-IVRGLPNDCQQCACP-----------LISSSNNFSPSCVL 1472
Query: 67 SALGGNRTRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
L R + Y GY P S G C C C+ + CD +G
Sbjct: 1473 EGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGG--TCQECECDPQGSLPLPCDPATG 1530
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+ G C+ C G+ A +G+ +C C
Sbjct: 1531 LCTCRPGATGPKCDGCQPGH---ARQGS--ECVFC 1560
Score = 150 (57.9 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRC-ICQDNTGGDNCERCARGYYG 142
GY +P+ G C PC CN + D CD+ SG C IC+ T G CE CA GY+G
Sbjct: 836 GYFGQPSVPGG--SCQPCQCNDNLDFSIPGSCDSLSGSCRICKPGTAGRRCELCADGYFG 893
Query: 143 NALEGAVTDCKQCPC 157
+A+E +C+ C C
Sbjct: 894 DAVEAK--NCQPCGC 906
Score = 140 (54.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 49/159 (30%), Positives = 68/159 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI C NT G NCE C G++ +G V+ PC PC D V +L N +
Sbjct: 346 CINCTQNTAGINCETCIDGFFRP--KG-VSPSYPRPCQ---PC---HCDPVGSL-NEVCV 395
Query: 64 RIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGG--AFSRCVPCNCNGHADIC-DAE 118
+ + RGLA H + G + + G + C PCNC+G D
Sbjct: 396 KDEK----RARRGLA-PGSCHCKPGFRGVSCDRCARGYTGYPDCKPCNCSGAGSTNEDPC 450
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
G C C++N G +C RC G++ N E C +C C
Sbjct: 451 FGPCNCKENVEGGDCGRCKAGFF-NLQEDNHKGCDECFC 488
Score = 123 (48.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 45/174 (25%), Positives = 71/174 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGP-CVQLDDDQVSNLG 58
RC C+ NT GD+C++C G++ T+C+ C C + C D+ V+
Sbjct: 274 RCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYY--DENVARRN 331
Query: 59 NRTRIRIKSALGG---NRTRGLA-LTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
I K GG N T+ A + +T + G+ ++ R C PC+C+ G
Sbjct: 332 LSLNIHGKYIGGGVCINCTQNTAGINCETC--IDGFFRPKGVSPSYPRPCQPCHCDPVGS 389
Query: 112 A-DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVT---DCKQCPCPNQG 161
++C + R G +C+ RG + T DCK C C G
Sbjct: 390 LNEVCVKDEKRARRGLAPGSCHCKPGFRGVSCDRCARGYTGYPDCKPCNCSGAG 443
Score = 112 (44.5 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ C+D+TGG +C +C G+YG+ +G DC C CP
Sbjct: 759 CLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCACP 796
Score = 111 (44.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 33/115 (28%), Positives = 47/115 (40%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC------NGHADICDAESG---RC-ICQDNTGGDNCERC 136
L G++ +P+ G + C+PC C N + C E G C C G C+RC
Sbjct: 775 LPGFYGDPSKGTS-EDCLPCACPLSIPSNNFSPTCHLERGLGLMCDACPAGYTGPRCDRC 833
Query: 137 ARGYYGN-ALEGAVTDCKQCPCPNQ------GPCVQLDDDQVVCSECPRGYGGEK 184
A GY+G ++ G C+ C C + G C L C C G G +
Sbjct: 834 AEGYFGQPSVPGG--SCQPCQCNDNLDFSIPGSCDSLSGS---CRICKPGTAGRR 883
Score = 98 (39.6 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 100 FSRCVPCNC--NGHAD-ICDAESGRCICQDNTG---------GDNCERCARGYYGNALEG 147
+ C PC C G D CD E+ +C C D TG G +C+RC G +G +
Sbjct: 1086 YPHCSPCECFLPGTDDRTCDPETKKCSCVDQTGQCTCKVNVEGVHCDRCRPGNFGLDAKN 1145
Query: 148 AVTDCKQCPC 157
+ C QC C
Sbjct: 1146 PL-GCSQCYC 1154
Score = 92 (37.4 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
IC+ T G CE CA GY+G+A+E +C+ C C
Sbjct: 874 ICKPGTAGRRCELCADGYFGDAVEAK--NCQPCGC 906
Score = 88 (36.0 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 25/72 (34%), Positives = 32/72 (44%)
Query: 121 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVVCSECPR 178
RC C G CERC+ GY G+ T C++C C QG + D +C+ C
Sbjct: 1479 RCTACPRGYEGQYCERCSAGYTGSPRSPGGT-CQECECDPQGSLPLPCDPATGLCT-CRP 1536
Query: 179 GYGGEKMSPGAQ 190
G G K G Q
Sbjct: 1537 GATGPKCD-GCQ 1547
Score = 76 (31.8 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
F C C++N G +C RC G++ N E C +C C
Sbjct: 451 FGPCNCKENVEGGDCGRCKAGFF-NLQEDNHKGCDECFC 488
Score = 69 (29.3 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 20/70 (28%), Positives = 26/70 (37%)
Query: 121 RCICQDNTGGDNCERCARGYY------GNAL-EGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
RC C G +CE C G+Y G+A A+ C C C G D + C
Sbjct: 1365 RCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVPCQC--HGHSSLCDPETSKC 1422
Query: 174 SECPRGYGGE 183
C G+
Sbjct: 1423 QNCQHHTAGD 1432
Score = 50 (22.7 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 27/102 (26%), Positives = 38/102 (37%)
Query: 101 SRCVPCNCNGHADICDAESGRCIC--QDNTGG--DNCERCARGYYGNA--------LEGA 148
S+C C + D C+ RC G ++C++CA ++ LEG
Sbjct: 1420 SKCQNCQHHTAGDFCE----RCALGYYGIVRGLPNDCQQCACPLISSSNNFSPSCVLEG- 1474
Query: 149 VTD--CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
+ D C CP +G C C GY G SPG
Sbjct: 1475 LDDYRCTACPRGYEGQ---------YCERCSAGYTGSPRSPG 1507
Score = 47 (21.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 12/37 (32%), Positives = 13/37 (35%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
C CP GP C C GY G+ PG
Sbjct: 818 CDACPAGYTGPR---------CDRCAEGYFGQPSVPG 845
Score = 39 (18.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 172 VCSECPRGYGG 182
VC +CP GY G
Sbjct: 691 VC-QCPPGYSG 700
Score = 38 (18.4 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQ 48
G CE C + + + +C C GP C Q
Sbjct: 737 GGICEPCQCFGHAESCDDLTGECLNCKDHTGGPHCNQ 773
Score = 35 (17.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 38
C C G +CE+ + + L A ++ K C
Sbjct: 692 CQCPPGYSGSSCEKRQQANASSNLIPA-SNTKSC 724
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 276 (102.2 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 47/97 (48%), Positives = 58/97 (59%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
G+ + GG F CVPC CN H D C+ SG C C NT G +CERC+ G+YGN G
Sbjct: 694 GFKRDIPFGGPFVTCVPCTCNQHGD-CEPLSGHCRCLHNTEGPSCERCSPGFYGNPFTGH 752
Query: 149 VTDCKQCPCPNQGPCVQLDDD-QVVCSECPRGYGGEK 184
DCK CPCP + PC QL +VVC+ CP G G++
Sbjct: 753 PDDCKPCPCPGRSPCTQLPSSGEVVCTHCPPGQRGKR 789
Score = 184 (69.8 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 56/186 (30%), Positives = 80/186 (43%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRT 61
RC+ C NT G+ C++C G+YG+AL + C C C G + L+ + G
Sbjct: 834 RCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEG---CDPGTGQ 890
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADI-CDAE 118
+ + LG RT GL H GY+ + G C C C+ G D C A
Sbjct: 891 CLCLPHVLG--RTCGLC----QH----GYYGLQAAVG----CKSCECHPVGSQDSGCHAV 936
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
+G+C CQ G C+RC G++G + G C+ C C G + C C
Sbjct: 937 TGQCSCQPGVTGLRCDRCEHGFFGFSARG----CRACNCSPLGSASAQCHENSTCL-CRP 991
Query: 179 GYGGEK 184
G+ G K
Sbjct: 992 GFVGYK 997
Score = 164 (62.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 49/158 (31%), Positives = 68/158 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNAL--EGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C G CE C G++G+ L G V C C C G +D + V N + + R
Sbjct: 781 CPPGQRGKRCELCDDGFFGDPLGQRGPVRPCVPCQC--HG---NVDLNAVGNCDSVSG-R 834
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHA---DICDAES 119
L + T G Q G++ + + +C CNCN G A + CD +
Sbjct: 835 CLRCL--HNTTG----EQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPGT 888
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
G+C+C + G C C GYYG L+ AV CK C C
Sbjct: 889 GQCLCLPHVLGRTCGLCQHGYYG--LQAAV-GCKSCEC 923
Score = 163 (62.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 51/194 (26%), Positives = 75/194 (38%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G +C+ C Y + A +C C C + D + G
Sbjct: 290 CVCEHNTAGTDCQHCQPFYQDRPWARGTAEAANECLPCDCSGRSEECFYDAELFRRTGRG 349
Query: 61 TRIR-IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI----- 114
R + G R RQ HY+ + + + C PC+C+ A +
Sbjct: 350 GHCRNCRDNTAGPRCEQC---RQNHYR---WEQQ-------AACQPCHCHP-AGVPLRPQ 395
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
CD+ SG C C+ N G CERC GY+ + EG C P + G C + C
Sbjct: 396 CDS-SGTCTCKANVTGWKCERCKDGYHSLS-EGGCRPCTCDPAGSVGTC-DPNTGHCTCK 452
Query: 175 ECPRGYGGEKMSPG 188
E G+ + PG
Sbjct: 453 ERVEGHLCNRCQPG 466
Score = 161 (61.7 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 33/96 (34%), Positives = 49/96 (51%)
Query: 89 GYHHEPTSG-GAFSRCVPCNCNGHADI-----CDAESGRCI-CQDNTGGDNCERCARGYY 141
G+ +P G CVPC C+G+ D+ CD+ SGRC+ C NT G+ C++C G+Y
Sbjct: 796 GFFGDPLGQRGPVRPCVPCQCHGNVDLNAVGNCDSVSGRCLRCLHNTTGEQCQQCRPGFY 855
Query: 142 GNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSEC 176
G+AL + C C C G + L+ +C
Sbjct: 856 GDALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQC 891
Score = 158 (60.7 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 25/45 (55%), Positives = 29/45 (64%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C C NT G +CERC+ G+YGN G DCK CPCP + PC QL
Sbjct: 726 CRCLHNTEGPSCERCSPGFYGNPFTGHPDDCKPCPCPGRSPCTQL 770
Score = 116 (45.9 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 115 CDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC-------------PN 159
CD+ SGRC+ C NT G+ C++C G+YG+AL + C C C P
Sbjct: 828 CDSVSGRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPG 887
Query: 160 QGPCVQLDDDQV-VCSECPRGYGGEKMSPGAQ 190
G C+ L C C GY G + + G +
Sbjct: 888 TGQCLCLPHVLGRTCGLCQHGYYGLQAAVGCK 919
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 106 CNCNGHADICDA-ESGR--CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPC 157
C CNGHA C E+GR C+C+ NT G +C+ C Y + A +C C C
Sbjct: 271 CKCNGHASECAPDEAGRLVCVCEHNTAGTDCQHCQPFYQDRPWARGTAEAANECLPCDC 329
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 31/105 (29%), Positives = 44/105 (41%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
GYH + GG C PC C+ G CD +G C C++ G C RC G++ N
Sbjct: 419 GYH-SLSEGG----CRPCTCDPAGSVGTCDPNTGHCTCKERVEGHLCNRCQPGWF-NLQP 472
Query: 147 GAVTDCKQCPC-PNQGPCVQLDDDQV--VCSECPRGYGGEKMSPG 188
C C C + C+ D +V + S+ G G + G
Sbjct: 473 YNPIGCTSCFCYGHSAVCMAADGYEVTHIRSDFREGLEGWAAAAG 517
Score = 72 (30.4 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQCPCPNQGPCVQL 49
C C + G CE CA G+ + G C C C G C L
Sbjct: 677 CTCPPSYTGSFCESCAPGFKRDIPFGGPFVTCVPCTCNQHGDCEPL 722
Score = 65 (27.9 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLDDDQVSNL 57
C C++ G C RC G++ N C C C + C+ D +V+++
Sbjct: 449 CTCKERVEGHLCNRCQPGWF-NLQPYNPIGCTSCFCYGHSAVCMAADGYEVTHI 501
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 225 (84.3 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 45/109 (41%), Positives = 57/109 (52%)
Query: 89 GYHHE--PTSGGAFSR-----CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGY 140
GYH P G R CVPCNCN H+D CD E+G+C+ C +T G++C+ CA GY
Sbjct: 1332 GYHRGKLPQGGSRGPRPLLAPCVPCNCNNHSDACDPETGKCLNCSHSTTGEHCDVCAPGY 1391
Query: 141 YGNALEGAVTDCKQCPCPNQGP------CVQLDDDQVVCSECPRGYGGE 183
YG + G+ +DC C CP P CV D C C GY G+
Sbjct: 1392 YGK-VTGSASDCSPCACPRSHPASFSPTCVLEGDADFRCDACVLGYEGQ 1439
Score = 213 (80.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 45/105 (42%), Positives = 57/105 (54%)
Query: 87 LTGYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRC-ICQDNTGGDNCERCARGYYGNA 144
L GY+ G F C PC C+GHA CD G C +C+ NT GD+CE+CA G+YG
Sbjct: 677 LPGYYR--VDGILFGGICQPCECHGHAAECDIH-GVCSVCKHNTTGDHCEQCAPGFYGLP 733
Query: 145 LEGAVTDCKQCPCP------NQGPCVQLD-DDQVVCSECPRGYGG 182
G DC++C CP N P L+ D+VVC +C GY G
Sbjct: 734 SRGTPGDCQRCACPLSTTSNNFSPTCHLEAGDEVVCDQCAPGYSG 778
Score = 182 (69.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 51/156 (32%), Positives = 73/156 (46%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C+ C +T G++C+ CA GYYG + G+ +DC C CP P V L
Sbjct: 1371 KCLNCSHSTTGEHCDVCAPGYYGK-VTGSASDCSPCACPRSHPA-SFSPTCV--LEGDAD 1426
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNG--HADICDAES 119
R + + G G R + +GYH P + GG RC C+ +G H D CD S
Sbjct: 1427 FRCDACVLGYE--GQYCERCS----SGYHGNPRALGGTCQRC-DCSPSGSVHGD-CDRGS 1478
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
G+C+C+ G CE+C + LE +DC C
Sbjct: 1479 GQCVCRPGATGLRCEQCEPRHI--LLE---SDCVSC 1509
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 55/187 (29%), Positives = 78/187 (41%)
Query: 7 CQDNTGGDNCERCARGYYGN-ALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
C G CERCA GYYGN + G C C C +D + + + T +
Sbjct: 772 CAPGYSGSWCERCADGYYGNPTVPGE--SCVPCNCSGN-----VDPFEAGHCDSVTGECL 824
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH---ADICDAESGRC 122
K GN T G R G++ + + C C C+G +D+C ++G C
Sbjct: 825 KCI--GN-TDGAHCERCAD----GFYGDAVTA---KNCRACECHGKGSISDVCHLDTGLC 874
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSE-----CP 177
C+ + G C++C GYYG L+ + C C C G + DD C+E C
Sbjct: 875 DCKPHVTGQQCDQCLPGYYG--LDTGL-GCLPCNCSASG---SMSDD---CTEDGQCHCL 925
Query: 178 RGYGGEK 184
G GEK
Sbjct: 926 PGVAGEK 932
Score = 165 (63.1 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 38/112 (33%), Positives = 51/112 (45%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICD--AESGRCICQDNTGGDNCERCARGYYGNA 144
L GY+ T G C+PCNC+ + D E G+C C G+ C+RCARG+Y
Sbjct: 889 LPGYYGLDTGLG----CLPCNCSASGSMSDDCTEDGQCHCLPGVAGEKCDRCARGFYAYQ 944
Query: 145 LEGAVTDCK----QCPC-PNQGPCVQLDDDQ-VVCSECPRGYGGEKMSPGAQ 190
+G T C Q C P G C+ + C +C GY G + G Q
Sbjct: 945 -DGGCTPCDCAHTQHTCDPESGACICPPHTRGATCDQCEDGYWGHDLELGCQ 995
Score = 153 (58.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 47/158 (29%), Positives = 69/158 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRT-R 62
CI C NT G NCE C GYY V+ + PC PC D D +L + +
Sbjct: 314 CINCLQNTVGINCETCIDGYYR---PHKVSPYEDNPCR---PC---DCDPFGSLSSVCIK 364
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGG--AFSRCVPCNCNGHADIC-DAES 119
++S L + G ++ + G + G A+ C+ C C+ + D S
Sbjct: 365 DELQSGLHKGKQPGQCPCKEGY---AGEKCDRCQFGYKAYPACIRCECSRAGSVNEDPCS 421
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C+C++N GDNC+ C G+Y N E C +C C
Sbjct: 422 EPCLCKENVEGDNCDLCKPGFY-NLKERNPEGCSECFC 458
Score = 145 (56.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 29/80 (36%), Positives = 37/80 (46%)
Query: 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C PC+C CD ESG CIC +T G C++C GY+G+ LE C+ C C G
Sbjct: 948 CTPCDCAHTQHTCDPESGACICPPHTRGATCDQCEDGYWGHDLE---LGCQACNCSAVGS 1004
Query: 163 CVQLDDDQVVCSECPRGYGG 182
D C +GG
Sbjct: 1005 ASHGCDALTGHCPCKPAFGG 1024
Score = 119 (46.9 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
+C+ NT GD+CE+CA G+YG G DC++C CP
Sbjct: 712 VCKHNTTGDHCEQCAPGFYGLPSRGTPGDCQRCACP 747
Score = 115 (45.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 29/83 (34%), Positives = 39/83 (46%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C CNC+ G A CDA +G C C+ GG +C +C+ GY DC C C
Sbjct: 994 CQACNCSAVGSASHGCDALTGHCPCKPAFGGLSCHQCSLGYRD------FPDCVACDCDL 1047
Query: 160 QGPCVQL-DDDQVVCSECPRGYG 181
+G D++Q +CS C G
Sbjct: 1048 RGTLADTCDEEQGLCS-CAEDTG 1069
Score = 110 (43.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 39/112 (34%), Positives = 48/112 (42%)
Query: 89 GYHHEPTSGGAFSRCVPCNC-NGH----ADICDAESG---RC-ICQDNTGGDNCERCARG 139
GY+ + T G+ S C PC C H + C E RC C G CERC+ G
Sbjct: 1390 GYYGKVT--GSASDCSPCACPRSHPASFSPTCVLEGDADFRCDACVLGYEGQYCERCSSG 1447
Query: 140 YYGN--ALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
Y+GN AL G C++C C G V +C RG G PGA
Sbjct: 1448 YHGNPRALGGT---CQRCDCSPSGS---------VHGDCDRGSGQCVCRPGA 1487
Score = 88 (36.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCK----QCPC-PNQGPCV 47
+C C G+ C+RCARG+Y +G T C Q C P G C+
Sbjct: 921 QCHCLPGVAGEKCDRCARGFYAYQ-DGGCTPCDCAHTQHTCDPESGACI 968
Score = 88 (36.0 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 100 FSRCVPCNCN--GH-ADICDAESGRCICQDNTG---------GDNCERCARGYYGNALEG 147
F CV C+C+ G AD CD E G C C ++TG G C C G Y +
Sbjct: 1037 FPDCVACDCDLRGTLADTCDEEQGLCSCAEDTGTCSCKENVLGLQCSECRAGTYALHADD 1096
Query: 148 AVTDCKQCPC 157
+ C C C
Sbjct: 1097 PL-GCIPCFC 1105
Score = 86 (35.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
CIC +T G C++C GY+G+ LE C+ C C G
Sbjct: 967 CICPPHTRGATCDQCEDGYWGHDLE---LGCQACNCSAVG 1003
Score = 80 (33.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 20/71 (28%), Positives = 28/71 (39%)
Query: 121 RCICQDNTGGDNCERCARGYY-GNALEGA-------VTDCKQCPCPNQGPCVQLDDDQVV 172
+C+C T G +C+ CA GY+ G +G + C C C N D +
Sbjct: 1314 KCLCPPGTAGFSCQDCAPGYHRGKLPQGGSRGPRPLLAPCVPCNCNNHSDAC--DPETGK 1371
Query: 173 CSECPRGYGGE 183
C C GE
Sbjct: 1372 CLNCSHSTTGE 1382
Score = 63 (27.2 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 53
C C+ GG +C +C+ GY DC C C +G D++
Sbjct: 1016 CPCKPAFGGLSCHQCSLGYRD------FPDCVACDCDLRGTLADTCDEE 1058
Score = 54 (24.1 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C++N G C C G Y + + C C C
Sbjct: 1071 CSCKENVLGLQCSECRAGTYALHADDPL-GCIPCFC 1105
Score = 45 (20.9 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 103 CVPCNCNGHADICDAESG 120
C+PC C G + C G
Sbjct: 1100 CIPCFCFGLSQACSELEG 1117
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 232 (86.7 bits), Expect = 6.9e-26, Sum P(2) = 6.9e-26
Identities = 50/115 (43%), Positives = 60/115 (52%)
Query: 85 YQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGN 143
Y+L T G CVPC CNGH+ CD E+ C CQ +T GD CERCA GYYG
Sbjct: 1395 YRLRSEPGGRTPGPTLGTCVPCQCNGHSSQCDPETSVCQNCQHHTAGDFCERCALGYYG- 1453
Query: 144 ALEGAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ G DC+ C CP N P CV + C+ CPRGY G E+ +PG
Sbjct: 1454 IVRGLPNDCQPCACPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPG 1508
Score = 211 (79.3 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 92 HEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAV 149
H +G F C PC C HA+ CD +G C+ C+D+TGG C C G+YG+ G+
Sbjct: 738 HRRVNGTIFGGICEPCQCFAHAEACDDITGECLNCKDHTGGPYCNECLPGFYGDPTRGSP 797
Query: 150 TDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC+ C CP N P LD ++C ECP GY G +
Sbjct: 798 EDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPIGYTGPR 839
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 49/152 (32%), Positives = 63/152 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ +T GD CERCA GYYG + G DC+ C CP P V L R
Sbjct: 1435 CQHHTAGDFCERCALGYYG-IVRGLPNDCQPCACPLISPSNNFSPSCV--LEGLEDYRCT 1491
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESGRCI 123
+ G G R GY P+S G C C C+ + + CD +G C
Sbjct: 1492 ACPRGYE--GQYCERCA----PGYTGSPSSPGG--SCQECECDPYGSLPVPCDRVTGLCT 1543
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C+ G C+ C + +A EGA +C C
Sbjct: 1544 CRPGATGRKCDGCE---HWHAREGA--ECVFC 1570
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 58/201 (28%), Positives = 87/201 (43%)
Query: 3 RRC-ICQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPC-PN-QGP-CVQLDDDQ 53
R C +C D GD NC+ C G+ E T QC C PN QG C + +
Sbjct: 892 RYCELCADGYFGDAVNTKNCQPCRCDINGSFSEDCHTRTGQCECRPNVQGRHCDECKPET 951
Query: 54 VS-NLGNRTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPC 106
LG R + G+++ + Q Q + G + + G F+ C+ C
Sbjct: 952 FGLQLG-RGCLPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIAC 1010
Query: 107 NCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-Q 165
+C+ + CD ++G+CIC NT G+ C C +G+++ VT CK C C G Q
Sbjct: 1011 DCSHLGNNCDPKTGQCICPPNTTGEKCSECLPNTWGHSI---VTGCKVCNCSTVGSLASQ 1067
Query: 166 LDDDQVVCSECPRGYGGEKMS 186
+ + CS C + G K S
Sbjct: 1068 CNVNTGQCS-CHPKFSGMKCS 1087
Score = 158 (60.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 48/161 (29%), Positives = 67/161 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYYG--NALEGAVTDCKQCPCPNQGPC--VQLDDDQVSNLGN 59
CI C NT G NCE C G++ C+ C C G V + D++ + G
Sbjct: 374 CINCTHNTAGINCETCVDGFFRPKGVSPNYPRPCQPCHCDPTGSLSEVCVKDEKYAQRGL 433
Query: 60 RT-RIRIKSALGG-NRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC-D 116
+ K+ GG N R + GYH P C PCNC+G D
Sbjct: 434 KPGSCHCKTGFGGVNCDRCVR----------GYHGYPD-------CQPCNCSGLGSTNED 476
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
G C C++N G++C RC G++ N E C++C C
Sbjct: 477 PCVGPCSCKENVEGEDCSRCKSGFF-NLQEDNQKGCEECFC 516
Score = 142 (55.0 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 31/79 (39%), Positives = 41/79 (51%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRC-ICQDNTGGDNCERCARGYYG 142
GY +P+ G C PC CN + D CD+ SG C IC+ T G CE CA GY+G
Sbjct: 846 GYFGQPSVPGG--SCQPCQCNDNLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFG 903
Query: 143 NALEGAVTDCKQCPCPNQG 161
+A+ +C+ C C G
Sbjct: 904 DAVN--TKNCQPCRCDING 920
Score = 140 (54.3 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---- 158
C+ C+C+ + CD ++G+CIC NT G+ C C +G+++ VT CK C C
Sbjct: 1007 CIACDCSHLGNNCDPKTGQCICPPNTTGEKCSECLPNTWGHSI---VTGCKVCNCSTVGS 1063
Query: 159 -------NQGPC-VQLDDDQVVCSECPRGY 180
N G C + CSEC RG+
Sbjct: 1064 LASQCNVNTGQCSCHPKFSGMKCSECSRGH 1093
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 41/166 (24%), Positives = 65/166 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+CIC NT G+ C C +G+++ VT CK C C G +L ++ +
Sbjct: 1025 QCICPPNTTGEKCSECLPNTWGHSI---VTGCKVCNCSTVG-----------SLASQCNV 1070
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC---NGHADICDAESG 120
+ G+ + + G+ + P C C+C A CD E+
Sbjct: 1071 NTGQCSCHPKFSGMKCSECSR----GHWNYPL-------CTLCDCFLPGTDATTCDLETR 1119
Query: 121 RCICQDNTG---------GDNCERCARGYYGNALEGAVTDCKQCPC 157
+C C D TG G +C+RC G +G + + C C C
Sbjct: 1120 KCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPL-GCSSCYC 1164
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 47/176 (26%), Positives = 74/176 (42%)
Query: 33 TDCKQCPCPNQGP-CVQLDDDQVSNLGNRTRIRIKSALGG---NRTRGLA-LTRQTHYQL 87
++C+ C C + C D+ V++ I K GG N T A + +T +
Sbjct: 335 SECEACNCHGKAEECYY--DETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETC--V 390
Query: 88 TGYHHEPTSGGAFSR-CVPCNCN--GH-ADICDAES---------GRCICQDNTGGDNCE 134
G+ + R C PC+C+ G +++C + G C C+ GG NC+
Sbjct: 391 DGFFRPKGVSPNYPRPCQPCHCDPTGSLSEVCVKDEKYAQRGLKPGSCHCKTGFGGVNCD 450
Query: 135 RCARGYYGNALEGAVTDCKQCPCP-----NQGPCV-----QLDDDQVVCSECPRGY 180
RC RGY+G DC+ C C N+ PCV + + + CS C G+
Sbjct: 451 RCVRGYHG------YPDCQPCNCSGLGSTNEDPCVGPCSCKENVEGEDCSRCKSGF 500
Score = 112 (44.5 bits), Expect = 6.9e-26, Sum P(2) = 6.9e-26
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ C+D+TGG C C G+YG+ G+ DC+ C CP
Sbjct: 769 CLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACP 806
Score = 91 (37.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 30/93 (32%), Positives = 37/93 (39%)
Query: 103 CVPCNC------NGHADIC---DAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDC 152
C PC C N + C E RC C G CERCA GY G+ + C
Sbjct: 1462 CQPCACPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGS-C 1520
Query: 153 KQCPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
++C C G V D +C+ C G G K
Sbjct: 1521 QECECDPYGSLPVPCDRVTGLCT-CRPGATGRK 1552
Score = 85 (35.0 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
IC+ T G CE CA GY+G+A+ +C+ C C G
Sbjct: 884 ICKPGTTGRYCELCADGYFGDAVN--TKNCQPCRCDING 920
Score = 84 (34.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 22/70 (31%), Positives = 27/70 (38%)
Query: 121 RCICQDNTGGDNCERCARGYY------GNALEG-AVTDCKQCPCPNQGPCVQLDDDQVVC 173
RC C G +CE CA G+Y G G + C C C G Q D + VC
Sbjct: 1375 RCDCPPGYSGLSCETCAPGFYRLRSEPGGRTPGPTLGTCVPCQC--NGHSSQCDPETSVC 1432
Query: 174 SECPRGYGGE 183
C G+
Sbjct: 1433 QNCQHHTAGD 1442
Score = 73 (30.8 bits), Expect = 8.2e-22, Sum P(2) = 8.2e-22
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 7 CQDNTGGDNCERCARGYYGN-ALEGAVTDCKQCPC 40
C G CERCA GY+G ++ G C+ C C
Sbjct: 831 CPIGYTGPRCERCAEGYFGQPSVPGG--SCQPCQC 863
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/139 (27%), Positives = 49/139 (35%)
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
R++S GG RT G L Q G H S C C + D C+ RC
Sbjct: 1396 RLRSEPGG-RTPGPTLGTCVPCQCNG--HSSQCDPETSVCQNCQHHTAGDFCE----RCA 1448
Query: 124 C--QDNTGG--DNCERCA-------RGYYGNA-LEGAVTD--CKQCPCPNQGPCVQLDDD 169
G ++C+ CA + + LEG + D C CP +G
Sbjct: 1449 LGYYGIVRGLPNDCQPCACPLISPSNNFSPSCVLEG-LEDYRCTACPRGYEGQ------- 1500
Query: 170 QVVCSECPRGYGGEKMSPG 188
C C GY G SPG
Sbjct: 1501 --YCERCAPGYTGSPSSPG 1517
Score = 49 (22.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 12/37 (32%), Positives = 14/37 (37%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
C +CP GP C C GY G+ PG
Sbjct: 828 CDECPIGYTGPR---------CERCAEGYFGQPSVPG 855
Score = 46 (21.3 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 5 CICQDNTGGDNCERCARGY--YGNALEGAVTDCKQCPC 40
C C G +CE C + + G + C+ C C
Sbjct: 720 CQCPPGYSGSSCETCWPRHRRVNGTIFGGI--CEPCQC 755
Score = 40 (19.1 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
G CE C + A + +C C GP
Sbjct: 747 GGICEPCQCFAHAEACDDITGECLNCKDHTGGP 779
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 232 (86.7 bits), Expect = 8.7e-26, Sum P(2) = 8.7e-26
Identities = 50/112 (44%), Positives = 60/112 (53%)
Query: 91 HHEP---TSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALE 146
H EP T G CVPC C+GH+ CD E+ C CQ +T GD CERCA GYYG +
Sbjct: 1365 HSEPGGRTPGPTLGTCVPCQCHGHSSQCDPETSVCQNCQHHTAGDFCERCALGYYG-IVR 1423
Query: 147 GAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGG---EKMSPG 188
G DC+ C CP N P CV + C+ CPRGY G E+ +PG
Sbjct: 1424 GLPNDCQPCACPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPG 1475
Score = 212 (79.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 92 HEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAV 149
H +G F C PC C GHA+ C+ +G C+ C+D+TGG C C G+YG+ G
Sbjct: 705 HRRVNGTIFGGLCEPCQCFGHAEACNDVTGECLSCKDHTGGPYCNECLPGFYGDPTRGTS 764
Query: 150 TDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC+ C CP N P LD ++C ECP GY G +
Sbjct: 765 EDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPVGYTGPR 806
Score = 174 (66.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 50/152 (32%), Positives = 64/152 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ +T GD CERCA GYYG + G DC+ C CP P V L R
Sbjct: 1402 CQHHTAGDFCERCALGYYG-IVRGLPNDCQPCACPLISPSNNFSPSCV--LEGLEDYRCT 1458
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESGRCI 123
+ G G R GY P+S G C C C+ + + CD +G C
Sbjct: 1459 ACPRGYE--GQYCERCA----PGYAGSPSSPGG--SCQECECDPYGSLPVPCDPVTGLCT 1510
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C+ G C+ C +G+A EGA +C C
Sbjct: 1511 CRPGATGRKCDGCE---HGHAREGA--ECVFC 1537
Score = 149 (57.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 57/201 (28%), Positives = 85/201 (42%)
Query: 3 RRC-ICQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPC-PN-QGP-CVQLDDDQ 53
R C +C D GD NC+ C G+ E QC C PN QG C + +
Sbjct: 859 RFCELCADGYFGDAVDAKNCQPCRCNVNGSFSEICHRKTGQCECRPNVQGQRCDECKPET 918
Query: 54 VS-NLGNRTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPC 106
LG R I G+++ + Q Q + G + + G F+ C C
Sbjct: 919 FGLQLG-RGCIPCNCNSFGSKSFDCEASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTAC 977
Query: 107 NCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-Q 165
+C+ + C+ ++G+CIC NT G+ C C +G+++ VT CK C C G Q
Sbjct: 978 DCSHLGNNCNPKTGQCICPPNTIGEKCSECLPNTWGHSI---VTGCKVCNCSTVGSLSSQ 1034
Query: 166 LDDDQVVCSECPRGYGGEKMS 186
+ + CS C + G K S
Sbjct: 1035 CNINTGQCS-CHPKFSGMKCS 1054
Score = 144 (55.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRC-ICQDNTGGDNCERCARGYYG 142
GY +P+ G C PC CN + D CD+ SG C IC+ T G CE CA GY+G
Sbjct: 813 GYFGQPSIPGG--SCQPCLCNDNLDFSIPGSCDSLSGSCLICKPGTTGRFCELCADGYFG 870
Query: 143 NALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+A++ +C+ C C G ++ + EC G++
Sbjct: 871 DAVDAK--NCQPCRCNVNGSFSEICHRKTGQCECRPNVQGQR 910
Score = 138 (53.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 50/189 (26%), Positives = 76/189 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ N G C+ C +G L G C C C + G + D + S +
Sbjct: 899 QCECRPNVQGQRCDECKPETFGLQL-GR--GCIPCNCNSFGS--KSFDCEASG-----QC 948
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
+ + G + R H GY + G C C+C+ + C+ ++G+CI
Sbjct: 949 WCQPGVAGKKC-----DRCAH----GYFNFQEGG-----CTACDCSHLGNNCNPKTGQCI 994
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-----------NQGPC-VQLDDDQV 171
C NT G+ C C +G+++ VT CK C C N G C +
Sbjct: 995 CPPNTIGEKCSECLPNTWGHSI---VTGCKVCNCSTVGSLSSQCNINTGQCSCHPKFSGM 1051
Query: 172 VCSECPRGY 180
CSEC RG+
Sbjct: 1052 KCSECNRGH 1060
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/160 (28%), Positives = 63/160 (39%)
Query: 5 CI-CQDNTGGDNCERCARGYYG--NALEGAVTDCKQCPCPNQGPC--VQLDDDQVSNLGN 59
CI C NT G NCE C G++ C+ C C G V + D++ + G
Sbjct: 341 CINCTHNTAGINCETCIDGFFRPKGVSPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRRGL 400
Query: 60 RT-RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC-DA 117
+ K GG + R GY P C PCNC+G D
Sbjct: 401 KPGSCYCKPGFGG-----MNCDRCVR----GYRGYPD-------CQPCNCSGLGSTNQDP 444
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
G C C++N G++C C G++ N E C++C C
Sbjct: 445 CIGPCSCKENVEGEDCSHCKFGFF-NLQEENQKGCEECFC 483
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 48/176 (27%), Positives = 74/176 (42%)
Query: 33 TDCKQCPCPNQGP-CVQLDDDQVSNLGNRTRIRIKSALGG---NRTRGLA-LTRQTHYQL 87
T+C+ C C + C D+ V++ I K GG N T A + +T +
Sbjct: 302 TECEACNCHGKAEECYY--DETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETC--I 357
Query: 88 TGYHHEPTSGGAFSR-CVPCNCN--GH-ADICDAES---------GRCICQDNTGGDNCE 134
G+ ++ R C PC+C+ G +++C + G C C+ GG NC+
Sbjct: 358 DGFFRPKGVSPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRRGLKPGSCYCKPGFGGMNCD 417
Query: 135 RCARGYYGNALEGAVTDCKQCPCP-----NQGPCV-----QLDDDQVVCSECPRGY 180
RC RGY G DC+ C C NQ PC+ + + + CS C G+
Sbjct: 418 RCVRGYRG------YPDCQPCNCSGLGSTNQDPCIGPCSCKENVEGEDCSHCKFGF 467
Score = 124 (48.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 39/155 (25%), Positives = 59/155 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRT-R 62
+CIC NT G+ C C +G+++ VT CK C C G L N G +
Sbjct: 992 QCICPPNTIGEKCSECLPNTWGHSI---VTGCKVCNCSTVG---SLSSQCNINTGQCSCH 1045
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC 122
+ RG +Y L G + C+ C ++G+C
Sbjct: 1046 PKFSGMKCSECNRG-----HWNYPLCSLCDCFLPG---TDATTCDSETRKCSCSDQTGQC 1097
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C+ N G +C+RC G +G + + C C C
Sbjct: 1098 TCKVNVEGVHCDRCRPGKFGLEAKNPL-GCSSCYC 1131
Score = 111 (44.1 bits), Expect = 8.7e-26, Sum P(2) = 8.7e-26
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ C+D+TGG C C G+YG+ G DC+ C CP
Sbjct: 736 CLSCKDHTGGPYCNECLPGFYGDPTRGTSEDCQPCACP 773
Score = 92 (37.4 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 30/93 (32%), Positives = 37/93 (39%)
Query: 103 CVPCNC------NGHADIC---DAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDC 152
C PC C N + C E RC C G CERCA GY G+ + C
Sbjct: 1429 CQPCACPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYAGSPSSPGGS-C 1487
Query: 153 KQCPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
++C C G V D +C+ C G G K
Sbjct: 1488 QECECDPYGSLPVPCDPVTGLCT-CRPGATGRK 1519
Score = 85 (35.0 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
IC+ T G CE CA GY+G+A++ +C+ C C G
Sbjct: 851 ICKPGTTGRFCELCADGYFGDAVDAK--NCQPCRCNVNG 887
Score = 84 (34.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 22/70 (31%), Positives = 27/70 (38%)
Query: 121 RCICQDNTGGDNCERCARGYY------GNALEG-AVTDCKQCPCPNQGPCVQLDDDQVVC 173
RC C G +CE CA G+Y G G + C C C G Q D + VC
Sbjct: 1342 RCDCPPGYSGLSCETCAPGFYRVHSEPGGRTPGPTLGTCVPCQC--HGHSSQCDPETSVC 1399
Query: 174 SECPRGYGGE 183
C G+
Sbjct: 1400 QNCQHHTAGD 1409
Score = 72 (30.4 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 7 CQDNTGGDNCERCARGYYGN-ALEGAVTDCKQCPC 40
C G CERCA GY+G ++ G C+ C C
Sbjct: 798 CPVGYTGPRCERCAEGYFGQPSIPGG--SCQPCLC 830
Score = 46 (21.3 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 5 CICQDNTGGDNCERC---ARGYYGNALEGAVTDCKQCPC 40
C C G +CE C R G G C+ C C
Sbjct: 687 CQCPPGYSGSSCEACWPRHRRVNGTIFGGL---CEPCQC 722
Score = 38 (18.4 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 9/33 (27%), Positives = 11/33 (33%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
G CE C + A +C C GP
Sbjct: 714 GGLCEPCQCFGHAEACNDVTGECLSCKDHTGGP 746
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 268 (99.4 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 43/97 (44%), Positives = 56/97 (57%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY E GG ++ C+PC CN H CD +G C+C +T G +CERC G+YGNA G
Sbjct: 702 GYKREIPHGGPYANCIPCTCNQHGT-CDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGR 760
Query: 149 VTDCKQCPCPNQGPCVQLDDD-QVVCSECPRGYGGEK 184
DC+ CPCP Q C + + VVC+ CP G G +
Sbjct: 761 ADDCQPCPCPGQSACATIPESGDVVCTHCPPGQRGRR 797
Score = 255 (94.8 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 62/196 (31%), Positives = 84/196 (42%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G +CERC G+YGNA G DC+ CPCP Q C + + G+
Sbjct: 734 CLCGHHTEGPSCERCMPGFYGNAFSGRADDCQPCPCPGQSACATIPES-----GDVVCTH 788
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDAE 118
G R G+ +P GA C C C+G+ D+ CD
Sbjct: 789 CPPGQRGRRCESCE---------DGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPH 839
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDD----QVV 172
SG C+ C NT G +CE C G+YG+A+ D C C C +G + + Q V
Sbjct: 840 SGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQCV 899
Query: 173 CSECPRGYGGEKMSPG 188
C G + SPG
Sbjct: 900 CLPYVSGRDCSRCSPG 915
Score = 151 (58.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 47/154 (30%), Positives = 64/154 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVSNLGNRTRIRI 65
C+D+T G +CERC + YY + + T C+ C C G +Q D+ V
Sbjct: 364 CRDHTTGPHCERCEKNYYRWSPK---TPCQPCDCHPAGSLSLQCDNSGVCPC-------- 412
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCI 123
K + G + L G+H + GG C PC CN G CD SG C
Sbjct: 413 KPTVTGWKCDRC---------LPGFH-SLSEGG----CRPCACNVAGSLGTCDPRSGNCP 458
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C++N G C+RC G + V C C C
Sbjct: 459 CKENVEGSLCDRCRPGTFNLQPHNPV-GCSSCFC 491
Score = 150 (57.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 40/159 (25%), Positives = 66/159 (41%)
Query: 7 CQDNTGGDNCERCARGYYGN--ALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C G CE C G++G+ L GA C++C C +D + V N +
Sbjct: 789 CPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGN-----VDLNAVGNCDPHS--- 840
Query: 65 IKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADI----CDAE 118
G+ R L T H + G++ + +C PC+C+ + C+
Sbjct: 841 ------GHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPV 894
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+G+C+C G +C RC+ G+Y L+ C+ C C
Sbjct: 895 TGQCVCLPYVSGRDCSRCSPGFYD--LQSG-RGCQSCKC 930
Score = 141 (54.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 101 SRCVPCNCNGHADIC--DAE-------SGRCI-CQDNTGGDNCERCARGYYGNALEGAVT 150
+ C+PCNC+GH++ C D E G C C+D+T G +CERC + YY + + T
Sbjct: 331 NECLPCNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPK---T 387
Query: 151 DCKQCPCPNQGPC-VQLDDDQVV-CSECPRGYGGEKMSPG 188
C+ C C G +Q D+ V C G+ ++ PG
Sbjct: 388 PCQPCDCHPAGSLSLQCDNSGVCPCKPTVTGWKCDRCLPG 427
Score = 114 (45.2 bits), Expect = 0.00092, P = 0.00092
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 106 CNCNGHADICDAES-GR--CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQC-PCPNQ 160
C CNGHA C+ + G+ C CQ NT G +CERC + G D +C PC
Sbjct: 280 CKCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCS 339
Query: 161 GPCVQLDDDQVVCSECPRGYGG 182
G + D+ + G+GG
Sbjct: 340 GHSEECTFDRELYRST--GHGG 359
Score = 111 (44.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 103 CVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C C C+ + C ++G+C C+ G C+RC G++G +++G C+ C C
Sbjct: 925 CQSCKCHPLGSLENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKG----CRDCRCSP 980
Query: 160 QGPCVQLDDDQVVCSECPRGYGGEK 184
G + C C G+ G K
Sbjct: 981 LGAASSQCHENSTCV-CRPGFVGYK 1004
Score = 76 (31.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPC 46
C+C G CE CA GY G +C C C G C
Sbjct: 685 CLCPQGYTGQFCEFCALGYKREIPHGGPYANCIPCTCNQHGTC 727
Score = 63 (27.2 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C++N G C+RC G + V C C C
Sbjct: 457 CPCKENVEGSLCDRCRPGTFNLQPHNPV-GCSSCFC 491
Score = 62 (26.9 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C+RC G++ + EG C+ C C
Sbjct: 410 CPCKPTVTGWKCDRCLPGFHSLS-EGG---CRPCAC 441
Score = 37 (18.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 166 LDDDQVVCSECPRGY 180
L D C ECP Y
Sbjct: 1014 LADGDTGCQECPTCY 1028
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 268 (99.4 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 43/97 (44%), Positives = 57/97 (58%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY E GG ++ C+PC CN H CD +G C+C +T G +CERC G+YGNA G
Sbjct: 702 GYKREIPHGGPYTNCIPCTCNQHGT-CDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGH 760
Query: 149 VTDCKQCPCPNQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC+ CPCP Q C + + + VVC+ CP G G +
Sbjct: 761 ADDCQPCPCPGQSACTTIPESRDVVCTHCPPGQRGRR 797
Score = 256 (95.2 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 65/196 (33%), Positives = 87/196 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G +CERC G+YGNA G DC+ CPCP Q C + + +R +
Sbjct: 734 CLCGHHTEGPSCERCMPGFYGNAFSGHADDCQPCPCPGQSACTTIPE-------SRDVVC 786
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADI-----CDAE 118
G RG R+ G+ +P GA C C C+ + D+ CD
Sbjct: 787 THCPPG---QRG----RRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPH 839
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDD----QVV 172
SGRC+ C NT G +CE C G+YG+AL D C C C +G Q + Q
Sbjct: 840 SGRCLRCLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGSSSQKTCNPATGQCA 899
Query: 173 CSECPRGYGGEKMSPG 188
C G + SPG
Sbjct: 900 CLPYVTGRDCSRCSPG 915
Score = 162 (62.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 50/186 (26%), Positives = 75/186 (40%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRT 61
RC+ C NT G +CE C G+YG+AL D C C C +G Q + N
Sbjct: 842 RCLRCLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGSSSQ----KTCNPATGQ 897
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAE 118
+ G + +R Y L +P G C C C+ + C +
Sbjct: 898 CACLPYVTGRDCSR----CSPGFYDL-----QPGRG-----CQSCKCHPVGSLENKCHPK 943
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
+G+C C+ G C+RC G++G +++G C+ C C G + C C
Sbjct: 944 TGQCPCRPGVTGQACDRCQLGFFGFSIKG----CRDCRCSPLGAASPQCHENSTCV-CRP 998
Query: 179 GYGGEK 184
G+ G K
Sbjct: 999 GFVGYK 1004
Score = 149 (57.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 47/153 (30%), Positives = 61/153 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D+T G +CE C + YY T C+ C C G + L Q N G K
Sbjct: 364 CRDHTAGPHCEHCEKNYYR---WDPKTPCQPCDCHPAGS-LSL---QCDNSGT---CPCK 413
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCIC 124
+ G + L G+H + GG C PC CN G CD SG C C
Sbjct: 414 LTVTGWKCDRC---------LPGFH-SLSEGG----CRPCTCNVAGSLGTCDPRSGNCPC 459
Query: 125 QDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
++N G C+RC G + N C C C
Sbjct: 460 KENVEGGLCDRCRPGTF-NLQPHNPAGCSSCFC 491
Score = 137 (53.3 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 55/194 (28%), Positives = 75/194 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQC-PCPNQGPCVQLDDDQVSNLGNRTR 62
C CQ NT G +CERC + G D +C PC G + D R
Sbjct: 299 CHCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCSGHSEECTFD-------REL 351
Query: 63 IRIKSALGGN--RTRG-LALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADI-CD 116
R + GG+ R R A H + Y +P + C PC+C+ G + CD
Sbjct: 352 YR-STGHGGHCQRCRDHTAGPHCEHCEKNYYRWDPKTP-----CQPCDCHPAGSLSLQCD 405
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD--DDQVVCS 174
SG C C+ G C+RC G++ + EG C+ C C G D C
Sbjct: 406 -NSGTCPCKLTVTGWKCDRCLPGFHSLS-EGG---CRPCTCNVAGSLGTCDPRSGNCPCK 460
Query: 175 ECPRGYGGEKMSPG 188
E G ++ PG
Sbjct: 461 ENVEGGLCDRCRPG 474
Score = 118 (46.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/82 (35%), Positives = 38/82 (46%)
Query: 106 CNCNGHADICDA-ESGR--CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQC-PCPNQ 160
C CNGHA C E+G+ C CQ NT G +CERC + G D +C PC
Sbjct: 280 CKCNGHASACGPNEAGQLACHCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCS 339
Query: 161 GPCVQLDDDQVVCSECPRGYGG 182
G + D+ + G+GG
Sbjct: 340 GHSEECTFDRELYRST--GHGG 359
Score = 82 (33.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 97 GGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
G + C C C+ G A E+ C+C+ G C+RC ++ ++G T C++
Sbjct: 967 GFSIKGCRDCRCSPLGAASPQCHENSTCVCRPGFVGYKCDRCQDNFF--LVDGD-TGCQE 1023
Query: 155 CP 156
CP
Sbjct: 1024 CP 1025
Score = 81 (33.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPC 46
C+C G CE CA GY G T+C C C G C
Sbjct: 685 CLCPQGYTGQFCEFCALGYKREIPHGGPYTNCIPCTCNQHGTC 727
Score = 62 (26.9 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C++N G C+RC G + N C C C
Sbjct: 457 CPCKENVEGGLCDRCRPGTF-NLQPHNPAGCSSCFC 491
Score = 41 (19.5 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 7 CQDNTGGDNCERCARGY----YGNALEGAVTDCKQ-----CP---CPNQGP-CVQLDD 51
C D G +RC + +G E + T C Q CP P GP C + DD
Sbjct: 34 CYDGAG--RAQRCLPEFENAAFGRRAEASHT-CGQPPEDFCPHVGAPGAGPQCQRCDD 88
Score = 36 (17.7 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 7/15 (46%), Positives = 7/15 (46%)
Query: 166 LDDDQVVCSECPRGY 180
L D C ECP Y
Sbjct: 1014 LVDGDTGCQECPTCY 1028
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 224 (83.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/102 (40%), Positives = 54/102 (52%)
Query: 92 HEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAV 149
H +G F C PC C GHA+ CD +G C+ C+ NTGG C+RC G+YG+ +G
Sbjct: 705 HRRVNGTIFGGVCTPCTCFGHAESCDDITGECLDCKHNTGGSYCDRCLPGFYGDPTKGTA 764
Query: 150 TDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
DC+ C CP N P D ++C ECP GY G +
Sbjct: 765 EDCQLCACPLNIPSNNFSPTCHFDQSHGLICDECPVGYVGPR 806
Score = 216 (81.1 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 45/115 (39%), Positives = 60/115 (52%)
Query: 85 YQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGN 143
Y+L H + CV C C+GH+ +CD ++ C CQ NT G +CERCA G+YG
Sbjct: 1364 YRLPASHGGRIPSQSLGACVVCQCHGHSTMCDPKTSVCQNCQHNTAGQHCERCALGFYG- 1422
Query: 144 ALEGAVTDCKQCPCP------NQGP-CVQLDDDQVVCSECPRGYGG---EKMSPG 188
++G+ DC+ C CP N P CV C+ CP GY G E+ SPG
Sbjct: 1423 IIQGSPEDCQPCACPLSISSNNFSPSCVVEGPSDYRCTACPPGYEGQYCERCSPG 1477
Score = 171 (65.3 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRC-ICQDNTGGDNCERCARGYYG 142
GY +P G C PC CN + D CD+ SG C IC+ T G CERCA GY+G
Sbjct: 813 GYFGQPLIPGG--SCQPCQCNNNLDFSIPGSCDSLSGACLICKSGTTGQYCERCADGYFG 870
Query: 143 NALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
+AL+ +C+ C C G ++ D Q EC
Sbjct: 871 DALDAR--NCQPCRCHVNGSISEICDSQTGQCEC 902
Score = 171 (65.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 48/158 (30%), Positives = 76/158 (48%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C +T G NCE C GY+ +G + D PC PC D +L + T +
Sbjct: 340 CVNCTSHTDGINCETCVDGYFRP--KGVLPDSPD-PCQ---PC---SCDPNGSL-HETCV 389
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGG--AFSRCVPCNCN--GHADICDAES 119
+ + G+ G + T Y G H + G + C+PCNC+ G A+I D
Sbjct: 390 KDEKHAEGDMLPGFCHCK-TGY--AGEHCSRCALGYTGYPDCLPCNCSVEGSANI-DPCV 445
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
G C+C+++ G+NC+RC G++ N + C++C C
Sbjct: 446 GLCVCKEHVEGENCDRCKSGFF-NLQQNNPKGCEECFC 482
Score = 160 (61.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 52/192 (27%), Positives = 78/192 (40%)
Query: 7 CQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLG--- 58
C D GD NC+ C G+ E + QC C Q D + G
Sbjct: 864 CADGYFGDALDARNCQPCRCHVNGSISEICDSQTGQCECKANVIGRQCDTCKPETFGLQS 923
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCNCNGHA 112
+R + G+++ Q + Q +TG + + G ++ C PC C+
Sbjct: 924 SRGCVPCNCNSFGSKSFDCDGNGQCYCQPGVTGKKCDRCAHGFYNFEEGGCTPCACSQFG 983
Query: 113 DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
+ CD SGRCIC NT G+ C++CA ++G+ + V CK C C G D
Sbjct: 984 NNCDPVSGRCICPPNTIGEMCDKCAPNHWGHDI---VHGCKPCDCSLIGALSAQCDLNTG 1040
Query: 173 CSECPRGYGGEK 184
C C + G+K
Sbjct: 1041 CCFCRPEFSGDK 1052
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 52/196 (26%), Positives = 72/196 (36%)
Query: 1 MFRRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
+ +C C G +CE C+ G+Y A G + P + G CV G+
Sbjct: 1341 LIEQCDCPLGYSGLSCESCSPGFYRLPASHGG-----RIPSQSLGACVVCQCH-----GH 1390
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC------NGHAD 113
T K+++ N T H + G+ C PC C N +
Sbjct: 1391 STMCDPKTSVCQNCQHN---TAGQHCERCALGFYGIIQGSPEDCQPCACPLSISSNNFSP 1447
Query: 114 ICDAESG---RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDD 168
C E RC C G CERC+ GY GN + C++C C G V D
Sbjct: 1448 SCVVEGPSDYRCTACPPGYEGQYCERCSPGYTGNP-QTPGGSCQECECDQYGSMPVPCDP 1506
Query: 169 DQVVCSECPRGYGGEK 184
VC+ C G+ G K
Sbjct: 1507 ATGVCT-CKPGFTGWK 1521
Score = 119 (46.9 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ C+ NTGG C+RC G+YG+ +G DC+ C CP
Sbjct: 736 CLDCKHNTGGSYCDRCLPGFYGDPTKGTAEDCQLCACP 773
Score = 106 (42.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 31/104 (29%), Positives = 42/104 (40%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGN--------ALEGA--- 148
C PC+C+ G CD +G C C+ GD C C GY+ L G
Sbjct: 1020 CKPCDCSLIGALSAQCDLNTGCCFCRPEFSGDKCTECRSGYWNYPQCIACQCVLSGTDPR 1079
Query: 149 --VTDCKQCPCPNQ-GPC-VQLDDDQVVCSECPRG-YGGEKMSP 187
TD C C N G C +++ + V C C G +G +P
Sbjct: 1080 SCETDLGTCSCVNHTGQCSCKVNVEGVHCDRCKSGTFGLSARNP 1123
Score = 91 (37.1 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RCIC NT G+ C++CA ++G+ + V CK C C
Sbjct: 992 RCICPPNTIGEMCDKCAPNHWGHDI---VHGCKPCDC 1025
Score = 86 (35.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C CQ G C+RCA G+Y N EG C C C G
Sbjct: 947 QCYCQPGVTGKKCDRCAHGFY-NFEEGG---CTPCACSQFG 983
Score = 83 (34.3 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 105 PCNCNGHADICDA--ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
P +C C +G+C C+ N G +C+RC G +G + + C C C
Sbjct: 1078 PRSCETDLGTCSCVNHTGQCSCKVNVEGVHCDRCKSGTFGLSARNPL-GCSSCYC 1131
Score = 75 (31.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 89 GYHHEP-TSGGAFSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGY 140
GY P T GG+ C C C+ + + CD +G C C+ G C C Y
Sbjct: 1477 GYTGNPQTPGGS---CQECECDQYGSMPVPCDPATGVCTCKPGFTGWKCAGCEHRY 1529
Score = 70 (29.7 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ N G +C+RC G +G + + C C C
Sbjct: 1096 QCSCKVNVEGVHCDRCKSGTFGLSARNPL-GCSSCYC 1131
Score = 45 (20.9 bits), Expect = 4.0e-22, Sum P(3) = 4.0e-22
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 173 CSECPRGYGGEKMSPG 188
C C GY G +PG
Sbjct: 1471 CERCSPGYTGNPQTPG 1486
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 249 (92.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 61/180 (33%), Positives = 87/180 (48%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C+ NT GD CERCA GYYGN + G + C+ CPCP +GP NR++
Sbjct: 877 CLNCRSNTAGDKCERCANGYYGNPVLGLGSQCRPCPCP-EGPNSGRHFAASCYQDNRSQQ 935
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-----CDAE 118
+ N +G R GY +P+ G +C PC C+ + D+ CD
Sbjct: 936 VVC-----NCNQGYTGPRCDECA-PGYFGDPSKPGG--QCQPCRCSNNIDLSDPESCDKR 987
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC----PNQGPCVQLDDDQVVC 173
+G+C+ C NT G +C C GYYG+A +C++C C + C+ DD VC
Sbjct: 988 TGQCLKCLYNTEGPDCSVCRSGYYGDASR---RNCRKCTCNFLGTERSQCLSRDD--CVC 1042
Score = 241 (89.9 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 48/103 (46%), Positives = 61/103 (59%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHAD C +G C+ C+ NT GD CERCA GYYGN + G + C+ CPCP
Sbjct: 855 FPNCRPCQCNGHADECHQRTGACLNCRSNTAGDKCERCANGYYGNPVLGLGSQCRPCPCP 914
Query: 159 NQGP---------CVQLD-DDQVVCSECPRGYGG---EKMSPG 188
+GP C Q + QVVC+ C +GY G ++ +PG
Sbjct: 915 -EGPNSGRHFAASCYQDNRSQQVVCN-CNQGYTGPRCDECAPG 955
Score = 152 (58.6 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 50/190 (26%), Positives = 75/190 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGN 59
RC+C+ NT G NCE+C Y EG T+ CK+C C D GN
Sbjct: 293 RCVCKHNTKGLNCEQCDDFYNDLPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLATGN 352
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQ-LTGYHHEPTSGGAFSRCVPCNCN--G--HADI 114
+ + L + +YQ T +P G CV C+C+ G + +
Sbjct: 353 ISGGVCDNCLHNTMGSNCESCKPFYYQDPTRDIRDP---GV---CVACDCDPDGSKNGGV 406
Query: 115 CDAE--------SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
CD +G+C C+DN G C++C G++G + C+ C C +G
Sbjct: 407 CDGHDDPSLGMIAGQCRCKDNVEGSRCDKCKPGFFGLSASDP-RGCQPCKCDPRGTVSGS 465
Query: 167 DDDQVVCSEC 176
V +C
Sbjct: 466 SQCDPVSGDC 475
Score = 143 (55.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 51/197 (25%), Positives = 77/197 (39%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC----PNQGPCVQLDDDQVSNLG 58
+C+ C NT G +C C GYYG+A +C++C C + C+ DD
Sbjct: 990 QCLKCLYNTEGPDCSVCRSGYYGDASR---RNCRKCTCNFLGTERSQCLSRDDCVCQRAT 1046
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR--CVPCNC---NGHAD 113
+ + + + +G T H P S S C PC C N +
Sbjct: 1047 GQCQC-LPNVIGQ----------------TCDHCAPNSWNLASGQGCEPCACDPNNAYTS 1089
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNA-LEGAVTDC-----KQCPCPNQ-GPCV-Q 165
C+ +G+C C+ GG C C ++G+ + DC + C G CV Q
Sbjct: 1090 ACNEFTGQCQCRVGFGGKTCTDCQENHWGDPRVLCRACDCDPRGIESSQCNRMTGHCVCQ 1149
Query: 166 LDDDQVVCSECPRGYGG 182
V C +C RG+ G
Sbjct: 1150 QGVSGVRCDQCARGFSG 1166
Score = 140 (54.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 45/181 (24%), Positives = 69/181 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C G C+ CA GY+G+ + C+ C C N + L D + + RT
Sbjct: 938 CNCNQGYTGPRCDECAPGYFGDPSKPG-GQCQPCRCSNN---IDLSDPE--SCDKRTGQC 991
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-ICDAESGRCI 123
+K L ++ R +Y + F C D +C +G+C
Sbjct: 992 LK-CLYNTEGPDCSVCRSGYYGDASRRNCRKCTCNFLGTERSQCLSRDDCVCQRATGQCQ 1050
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLDDDQVVCSECPRGYGG 182
C N G C+ CA + N G C+ C C PN ++ C +C G+GG
Sbjct: 1051 CLPNVIGQTCDHCAPNSW-NLASGQ--GCEPCACDPNNAYTSACNEFTGQC-QCRVGFGG 1106
Query: 183 E 183
+
Sbjct: 1107 K 1107
Score = 124 (48.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD-DQVSNLGNRTR 62
+C C+DN G C++C G++G + C+ C C +G D VS G+
Sbjct: 421 QCRCKDNVEGSRCDKCKPGFFGLSASDP-RGCQPCKCDPRGTVSGSSQCDPVS--GDCFC 477
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN-GHA--DICDAES 119
R+ + N+ L H+ L+ H+ TSG C C+C+ G A + C E+
Sbjct: 478 KRLVTGHSCNQ----CLPE--HWALS---HD-TSG-----CRGCDCDVGGATENQCSMET 522
Query: 120 GRCICQDNTGGDNCERCARGYYGNALE 146
G+C C+ + G C + GY+ AL+
Sbjct: 523 GQCQCRSHMIGRQCNQVESGYFFMALD 549
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 25/75 (33%), Positives = 34/75 (45%)
Query: 106 CNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C C+ + CD G+C C+ N G CE+CA G YG G CK C C +G
Sbjct: 767 CECDPQGSLSSECDVRGGQCRCRPNISGRRCEKCAPGAYGFGPSG----CKLCECSLEGS 822
Query: 163 CVQLDDDQVVCSECP 177
+ D + +CP
Sbjct: 823 QSRFCD--LYSGQCP 835
Score = 106 (42.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 103 CVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+C+ G + C+ +G C+CQ G C++CARG+ G DCK C
Sbjct: 1124 CRACDCDPRGIESSQCNRMTGHCVCQQGVSGVRCDQCARGF-----SGTFPDCKPC 1174
Score = 87 (35.7 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G CE+CA G YG G CK C C +G
Sbjct: 785 QCRCRPNISGRRCEKCAPGAYGFGPSG----CKLCECSLEG 821
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 256 (95.2 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 41/91 (45%), Positives = 53/91 (58%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY GG ++ CVPC CN H CD +G C+C +T G +CERC G+YGN G
Sbjct: 704 GYKRNTPLGGPYASCVPCTCNQHGT-CDPNTGVCLCGHHTEGPSCERCLPGFYGNPFTGQ 762
Query: 149 VTDCKQCPCPNQGPCVQLDDD-QVVCSECPR 178
DC+ CPCP Q C + + +VVC+ CPR
Sbjct: 763 ADDCQPCPCPGQSACTTIPESGEVVCTHCPR 793
Score = 165 (63.1 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 48/179 (26%), Positives = 69/179 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QV--SNLGNRT 61
C+C +T G +CERC G+YGN G DC+ CPCP Q C + + +V ++
Sbjct: 736 CLCGHHTEGPSCERCLPGFYGNPFTGQADDCQPCPCPGQSACTTIPESGEVVCTHCPRSQ 795
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGG-AFSRCVPCNCNGHADICDAESG 120
R R G G T + ++ +P + PC+ GH G
Sbjct: 796 RARAVGCCGFLAELGPLST--SRWEFGNRRIQPCPNPQSLVAVTPCSPRGHVP------G 847
Query: 121 RCICQDNTGGDNCERCARGY-YGNALEGAV-TDCKQCPCPNQGPCVQLDDDQVVCSECP 177
C NT C C G G + G + C +C C G DQ + + P
Sbjct: 848 ALRCSLNTLYSCCCCCREGQKLGVGVRGRPGSHCSRCSCDGSGGRQARHQDQDLTAVSP 906
Score = 142 (55.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/192 (26%), Positives = 72/192 (37%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C CQ NT G +CERC + + A +C C C D + + G+
Sbjct: 303 CRCQHNTTGTDCERCLPFFQDRPWARGTAEAANECLPCNCSGHSEECTFDRELFRSSGHG 362
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDA 117
R A T G R Q Y P + C PC+C+ + CD
Sbjct: 363 GRCLHCRA----HTAGPHCER---CQENFYRWSPQTP-----CQPCDCHPAGSLRLQCD- 409
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
+ G C+C+ G C+RC G++ + EG C P + G C + C E
Sbjct: 410 DLGTCVCKPTVMGWKCDRCLSGFHSLS-EGGCRPCTCNPVGSLGTC-DPRSGRCHCKENV 467
Query: 178 RGYGGEKMSPGA 189
G ++ PGA
Sbjct: 468 EGSLCDRCRPGA 479
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/73 (38%), Positives = 35/73 (47%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNA 144
L+G+H + GG C PC CN G CD SGRC C++N G C+RC G + N
Sbjct: 429 LSGFH-SLSEGG----CRPCTCNPVGSLGTCDPRSGRCHCKENVEGSLCDRCRPGAF-NL 482
Query: 145 LEGAVTDCKQCPC 157
C C C
Sbjct: 483 QPHNPAGCSSCFC 495
Score = 92 (37.4 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 22/68 (32%), Positives = 25/68 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C C G CE CA GY N L G C C C G C + +C G
Sbjct: 687 CSCPQGYTGQFCESCAPGYKRNTPLGGPYASCVPCTCNQHGTC-DPNTGVCLCGHHTEGP 745
Query: 181 GGEKMSPG 188
E+ PG
Sbjct: 746 SCERCLPG 753
Score = 68 (29.0 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC C++N G C+RC G + N C C C
Sbjct: 460 RCHCKENVEGSLCDRCRPGAF-NLQPHNPAGCSSCFC 495
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 244 (91.0 bits), Expect = 7.7e-24, Sum P(2) = 7.7e-24
Identities = 50/108 (46%), Positives = 65/108 (60%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + G RCVPCNCNGH++ C SG C+ CQ NT G++CERC GYYGNA+ G
Sbjct: 1671 GYYRDH-KGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVHG 1729
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ CPCP+ CV ++ V CS C GY G E+ +PG
Sbjct: 1730 S---CRACPCPHTNSFATGCV-VNGGDVRCS-CKAGYTGTQCERCAPG 1772
Score = 190 (71.9 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 51/151 (33%), Positives = 71/151 (47%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDD---QVSN 56
RC CQ +T G+ C+RC GY A + C+ C C D D Q ++
Sbjct: 318 RCECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQAS 377
Query: 57 LGNRTRIRIKSALGGN---RTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCNG- 110
L N I + N T G+ + + +Y+ G + G C+PC+C+
Sbjct: 378 L-NTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDG-----CIPCSCDPE 431
Query: 111 HADICDAESGRCICQDNTGGDNCERCARGYY 141
HAD C+ SGRC C+ N GDNCE+CA GYY
Sbjct: 432 HADGCEQGSGRCHCKPNFHGDNCEKCAIGYY 462
Score = 179 (68.1 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 47/137 (34%), Positives = 62/137 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT G++CERC GYYGNA+ G+ C+ CPCP+ V N G R
Sbjct: 1703 CVNCQHNTAGEHCERCQEGYYGNAVHGS---CRACPCPHTN---SFATGCVVN-GGDVRC 1755
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K+ G + A GY P GG+ C CN NG C +G C
Sbjct: 1756 SCKAGYTGTQCERCA---------PGYFGNPQKFGGSCQPC-SCNSNGQLGSCHPLTGDC 1805
Query: 123 ICQ---DNTGGDNCERC 136
I Q D++ + C+ C
Sbjct: 1806 INQEPKDSSPAEECDDC 1822
Score = 157 (60.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/188 (29%), Positives = 74/188 (39%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPC-PNQGPCVQLDDDQVSNLGN 59
CI CQ NT G NCE+CA+GYY G ++ A C C C P + + N
Sbjct: 390 CINCQHNTAGVNCEQCAKGYYRPYGVPVD-APDGCIPCSCDPEHADGCEQGSGRCHCKPN 448
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA-DICDAE 118
+ G L T +P +G C CN G +ICDA
Sbjct: 449 FHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD-IKGC-DCNLEGVLPEICDAH 506
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV--CSEC 176
GRC+C+ G C+ C G+Y + C+ C C G Q+ V C EC
Sbjct: 507 -GRCLCRPGVEGPRCDTCRSGFYSFPI------CQACWCSALGS-YQMPCSSVTGQC-EC 557
Query: 177 PRGYGGEK 184
G G++
Sbjct: 558 RPGVTGQR 565
Score = 145 (56.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 51/176 (28%), Positives = 70/176 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C C GD+C+ C+ GYY + +G T C C C G Q D G+ +
Sbjct: 1654 CACPPAYAGDSCQGCSPGYYRDH-KGLYTGRCVPCNC--NGHSNQCQD------GSGICV 1704
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC-NCNGHADICDAESG-- 120
+ + T G R GY+ G R PC + N A C G
Sbjct: 1705 NCQ-----HNTAGEHCERCQE----GYYGNAVHGSC--RACPCPHTNSFATGCVVNGGDV 1753
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
RC C+ G CERCA GY+GN + + C+ C C + G QL + +C
Sbjct: 1754 RCSCKAGYTGTQCERCAPGYFGNPQKFGGS-CQPCSCNSNG---QLGSCHPLTGDC 1805
Score = 123 (48.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 86 QLTGYHHEPTSGG--AFSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGY 140
++TG + + G F CVPCNCN G +CD +G C+C++N G C C G
Sbjct: 1383 RITGRQCDRCASGFYRFPECVPCNCNRDGTEPGVCDPGTGACLCKENVEGTECNVCREGS 1442
Query: 141 YGNALEGA-VTDCKQCPC 157
+ L+ A + C C C
Sbjct: 1443 FH--LDPANLKGCTSCFC 1458
Score = 107 (42.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/72 (36%), Positives = 31/72 (43%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNG-HADICDAESGRCICQDNTGGDNCERCARGYYGNAL 145
L ++H+ G C P G H C E G+C CQ N G C RCA G+YG
Sbjct: 1255 LVAFYHK---GALPCECHPTGATGPH---CSPEGGQCPCQPNVIGRQCTRCATGHYG--- 1305
Query: 146 EGAVTDCKQCPC 157
CK C C
Sbjct: 1306 ---FPRCKPCSC 1314
Score = 105 (42.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 22/65 (33%), Positives = 29/65 (44%)
Query: 103 CVPCNCNGHADI------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+ I CD +SG+C C+ G C+RCA G+Y +C C
Sbjct: 1353 CEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCASGFY------RFPECVPCN 1406
Query: 157 CPNQG 161
C G
Sbjct: 1407 CNRDG 1411
Score = 93 (37.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/89 (26%), Positives = 36/89 (40%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERC-ARGYYGNALEGAVTDCKQCPCP 158
F RC PC+C +C+ +G+C C T CE C + + + G C+ C C
Sbjct: 1306 FPRCKPCSCGRR--LCEEMTGQCRCPPRTVRPQCEVCETHSFSFHPMAG----CEGCNCS 1359
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEKMSP 187
+G + EC R G + P
Sbjct: 1360 RRGTI------EAAMPECDRDSGQCRCKP 1382
Score = 81 (33.6 bits), Expect = 7.7e-24, Sum P(2) = 7.7e-24
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C C+ + GGD+C+ C GY+ ALE + C+ C C
Sbjct: 652 CHCKSHVGGDSCDTCEDGYF--ALEKSNYFGCQGCQC 686
Score = 79 (32.9 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C CQ N G C RCA G+YG CK C C
Sbjct: 1284 QCPCQPNVIGRQCTRCATGHYG------FPRCKPCSC 1314
Score = 67 (28.6 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C+RCA G+Y +C C C G
Sbjct: 1377 QCRCKPRITGRQCDRCASGFY------RFPECVPCNCNRDG 1411
Score = 60 (26.2 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C+C++N G C C G + L+ A + C C C
Sbjct: 1424 CLCKENVEGTECNVCREGSFH--LDPANLKGCTSCFC 1458
Score = 45 (20.9 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 1 MFRRCICQDNTGGDNCERC-ARGYYGNALEGAVTDCKQCPCPNQG 44
M +C C T CE C + + + G C+ C C +G
Sbjct: 1322 MTGQCRCPPRTVRPQCEVCETHSFSFHPMAG----CEGCNCSRRG 1362
Score = 44 (20.5 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 5 CICQDNTGGDNCERCARGYY 24
C C+++ G C+R YY
Sbjct: 703 CQCREHVVGKVCQRPENNYY 722
Score = 39 (18.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPC 40
G NC R RG A+ D QC C
Sbjct: 1355 GCNCSR--RGTIEAAMPECDRDSGQCRC 1380
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 223 (83.6 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 39/88 (44%), Positives = 51/88 (57%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
CVPC+CN H+D CD +G+C+ C DNT GD+C+ C GYYG + G+ +DC C CP+
Sbjct: 1400 CVPCSCNNHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGYYGK-VTGSASDCALCACPHSP 1458
Query: 162 P------CVQLDDDQVVCSECPRGYGGE 183
P CV D C C GY G+
Sbjct: 1459 PASFSPTCVLEGDHDFRCDACLLGYEGK 1486
Score = 198 (74.8 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 44/105 (41%), Positives = 54/105 (51%)
Query: 87 LTGYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNA 144
L+GY+ G F C PC C+GHA C+ G CI C NT G +CE+C G+YG
Sbjct: 724 LSGYYR--VDGILFGGICQPCECHGHAAECNVH-GVCIACAHNTTGVHCEQCLPGFYGEP 780
Query: 145 LEGAVTDCKQCPCP------NQGPCVQLDD-DQVVCSECPRGYGG 182
G DC+ C CP N P L+D D+VVC C GY G
Sbjct: 781 SRGTPGDCQPCACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYSG 825
Score = 191 (72.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 49/156 (31%), Positives = 72/156 (46%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C+ C DNT GD+C+ C GYYG + G+ +DC C CP+ P V G+
Sbjct: 1418 KCLNCGDNTAGDHCDVCTSGYYGK-VTGSASDCALCACPHSPPA-SFSPTCVLE-GDHD- 1473
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAES 119
R + L G + ++Y G + T GG+ C C+CN H + CD S
Sbjct: 1474 FRCDACLLGYEGKHCERCSSSYY---G--NPQTPGGS---CQKCDCNPHGSVHGDCDRTS 1525
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
G+C+C+ G C+ C + +E TDC C
Sbjct: 1526 GQCVCRLGASGLRCDECEPRHI--LME---TDCVSC 1556
Score = 168 (64.2 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRCI-CQDNTGGDNCERCARGYYG 142
GY+ PT G CVPC+C+G+ D CD+ +G C+ C NT G +CERCA G+YG
Sbjct: 834 GYYGNPTVPG--ESCVPCDCSGNVDPSEAGHCDSVTGECLKCLGNTDGAHCERCADGFYG 891
Query: 143 NALEGAVTDCKQCPCPNQG 161
+A+ +C+ C C +G
Sbjct: 892 DAV--TAKNCRACECHVKG 908
Score = 165 (63.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 53/159 (33%), Positives = 64/159 (40%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPC--VQLDDDQVSNLGN 59
CI C NT G NCE C GYY D C+ C C G V + DD S+L N
Sbjct: 361 CINCLQNTMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHN 420
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE- 118
K G + QL GY PT CV C CN D
Sbjct: 421 G-----KQPGQCPCKEGYTGEKCDRCQL-GYKDYPT-------CVSCGCNPVGSASDEPC 467
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+G C+C++N G C+RC G+Y N E C +C C
Sbjct: 468 TGPCVCKENVEGKACDRCKPGFY-NLKEKNPRGCSECFC 505
Score = 151 (58.2 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 39/113 (34%), Positives = 50/113 (44%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDA--ESGRCICQDNTGGDNCERCARGYYGNA 144
L GY+ + G C PCNC+ + D + G+C C G C+RCA G+Y
Sbjct: 936 LHGYYGLDSGHG----CRPCNCSVAGSVSDGCTDEGQCHCVPGVAGKRCDRCAHGFYAYQ 991
Query: 145 LEGAVTDCKQCP-----C-PNQGPCVQLDDDQ-VVCSECPRGYGGEKMSPGAQ 190
+G+ T C CP C P G CV Q V C EC G+ G G Q
Sbjct: 992 -DGSCTPC-DCPHTQNTCDPETGECVCPPHTQGVKCEECEDGHWGYDAEVGCQ 1042
Score = 137 (53.3 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 51/193 (26%), Positives = 75/193 (38%)
Query: 7 CQDNTGGD-----NCERC---ARGYYGNA--LEGAVTDCKQCPCPNQGPCVQ-LDDDQVS 55
C D GD NC C +G + LE + DCK P C Q L
Sbjct: 885 CADGFYGDAVTAKNCRACECHVKGSHSAVCHLETGLCDCK--PNVTGQQCDQCLHGYYGL 942
Query: 56 NLGNRTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCNCN 109
+ G+ R ++ G+ + G Q H + G + + G ++ C PC+C
Sbjct: 943 DSGHGCR-PCNCSVAGSVSDGCTDEGQCHCVPGVAGKRCDRCAHGFYAYQDGSCTPCDCP 1001
Query: 110 GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
+ CD E+G C+C +T G CE C G++G E C+ C C G D
Sbjct: 1002 HTQNTCDPETGECVCPPHTQGVKCEECEDGHWGYDAE---VGCQACNCSLVGSTHHRCDV 1058
Query: 170 QVVCSECPRGYGG 182
+C +GG
Sbjct: 1059 VTGHCQCKSKFGG 1071
Score = 135 (52.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 57/200 (28%), Positives = 83/200 (41%)
Query: 1 MFRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
+ C+C T G +C+ CA GY+ L A +D + P P PCV + S+ +
Sbjct: 1358 LLENCVCPPGTVGFSCQDCAPGYHRGKLP-AGSD--RGPRPLVAPCVPCSCNNHSDTCDP 1414
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN-----GHADIC 115
+ + G+ T G T +GY+ + T G+ S C C C + C
Sbjct: 1415 NTGKCLNC--GDNTAGDHCDVCT----SGYYGKVT--GSASDCALCACPHSPPASFSPTC 1466
Query: 116 DAESG---RC-ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PN----------Q 160
E RC C G +CERC+ YYGN + C++C C P+
Sbjct: 1467 VLEGDHDFRCDACLLGYEGKHCERCSSSYYGNP-QTPGGSCQKCDCNPHGSVHGDCDRTS 1525
Query: 161 GPCV-QLDDDQVVCSEC-PR 178
G CV +L + C EC PR
Sbjct: 1526 GQCVCRLGASGLRCDECEPR 1545
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 55/188 (29%), Positives = 68/188 (36%)
Query: 5 CICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
C C G +CE C GYY L G + C+ C C G + N
Sbjct: 709 CECPQGYTGTSCESCLSGYYRVDGILFGGI--CQPCEC--HGHAAEC---------NVHG 755
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC------NGHADICD 116
+ I A + T G+ L G++ EP S G C PC C N + C
Sbjct: 756 VCIACA---HNTTGV----HCEQCLPGFYGEP-SRGTPGDCQPCACPLTIASNNFSPTCH 807
Query: 117 AESGRCI----CQDNTGGDNCERCARGYYGN-ALEGAVTDCKQCPCP-NQGPCVQLDDDQ 170
G + C G CERCA GYYGN + G C C C N P D
Sbjct: 808 LNDGDEVVCDWCAPGYSGAWCERCADGYYGNPTVPGE--SCVPCDCSGNVDPSEAGHCDS 865
Query: 171 VV--CSEC 176
V C +C
Sbjct: 866 VTGECLKC 873
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 43/167 (25%), Positives = 61/167 (36%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G CE C G++G E C+ C C G D V+ +
Sbjct: 1014 CVCPPHTQGVKCEECEDGHWGYDAE---VGCQACNCSLVGS-THHRCDVVTG-----HCQ 1064
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHE--PTSGGAFSRCVPCNCNGHADICDAESGRC 122
KS GG +L + + TSG A CN C E+G C
Sbjct: 1065 CKSKFGGRACDQCSLGYRDFPDCVPCDCDLRGTSGDA------CNLEQGLCGCVEETGAC 1118
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDD 168
C++N G C C G + + + C C C C +L+D
Sbjct: 1119 PCKENVFGPQCNECREGTFALRADNPL-GCSPCFCSGLSHLCSELED 1164
Score = 117 (46.2 bits), Expect = 0.00080, P = 0.00080
Identities = 48/203 (23%), Positives = 74/203 (36%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE-GAVTD---CKQCPCPNQGPCVQLDDD---QVSN 56
+C C+ NT G++C RC GY+ G V+ C+ C C N+ D+ Q +
Sbjct: 289 QCQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEACNCHNKAKDCYYDESVAKQKKS 348
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHH-EPTSGGAFSRCVPCNCN--GH-A 112
L + R + + +T + GY+ S C PCNC+ G +
Sbjct: 349 LNTAGQFRGGGVCINCLQNTMGINCETC--IDGYYRPHKVSPYEDEPCRPCNCDPVGSLS 406
Query: 113 DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQG--PCVQLDDD 169
+C + + C C GY G + K P C + G P D+
Sbjct: 407 SVCIKDDLHSDLHNGKQPGQCP-CKEGYTGEKCDRCQLGYKDYPTCVSCGCNPVGSASDE 465
Query: 170 QV----VCSECPRGYGGEKMSPG 188
VC E G ++ PG
Sbjct: 466 PCTGPCVCKENVEGKACDRCKPG 488
Score = 99 (39.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C+ C NT G +CERCA G+YG+A+ +C+ C C +G
Sbjct: 870 CLKCLGNTDGAHCERCADGFYGDAV--TAKNCRACECHVKG 908
Score = 81 (33.6 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ N G C++C GYYG L+ C+ C C G
Sbjct: 921 CDCKPNVTGQQCDQCLHGYYG--LDSG-HGCRPCNCSVAG 957
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 245 (91.3 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 58/164 (35%), Positives = 80/164 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVS---NLGNRTRI 63
C NT GD+CE+C G+YG G DC+ C CP + +D + S +L +R +
Sbjct: 767 CTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACP-----LSIDSNNFSPTCHLTDREEV 821
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-----CDAE 118
G G R GY+ PT G CVPCNC+G+ D CD+
Sbjct: 822 VCDQCAPGYS--GAWCERCAD----GYYGNPTVPGG--TCVPCNCSGNVDPLEAGHCDSV 873
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
+G C+ C NT G +CERCA G+YG+A+ +C+ C C G
Sbjct: 874 TGECLKCLWNTDGAHCERCADGFYGDAV--TAKNCRACNCHENG 915
Score = 242 (90.2 bits), Expect = 5.7e-23, Sum P(2) = 5.7e-23
Identities = 48/109 (44%), Positives = 59/109 (54%)
Query: 89 GYHHE--PTSGGAFSR-----CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGY 140
GYH P S G R CVPCNCN H+D+CD E+G+C+ C+D+T GD+CE C GY
Sbjct: 1386 GYHRGKLPESSGRGPRPLLAPCVPCNCNNHSDVCDPETGKCLNCRDHTAGDHCELCTAGY 1445
Query: 141 YGNALEGAVTDCKQCPCPNQGP------CVQLDDDQVVCSECPRGYGGE 183
YG + G DC C CP+ P CV D C C GY G+
Sbjct: 1446 YGKVI-GLPGDCTPCTCPHHPPFSFSPTCVLEGDSGFWCDACLPGYEGQ 1493
Score = 201 (75.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 43/105 (40%), Positives = 53/105 (50%)
Query: 87 LTGYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNA 144
L GY+ G F C PC C+GH+ CD G C C NT GD+CE+C G+YG
Sbjct: 731 LPGYYR--VDGILFGGICQPCECHGHSSECDIH-GICSGCTHNTTGDHCEQCLPGFYGTP 787
Query: 145 LEGAVTDCKQCPCP------NQGPCVQLDD-DQVVCSECPRGYGG 182
G DC+ C CP N P L D ++VVC +C GY G
Sbjct: 788 SRGTPGDCQPCACPLSIDSNNFSPTCHLTDREEVVCDQCAPGYSG 832
Score = 156 (60.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 50/159 (31%), Positives = 66/159 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPC--VQLDDDQVSNLGN 59
CI C NT G NCE C YY D C+ C C G V + DD ++L N
Sbjct: 368 CINCLQNTTGINCETCIDQYYRPHKVSPYEDQPCRPCDCDPVGSLSSVCIKDDLHADLAN 427
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC-DAE 118
K +G A + Q GY F CVPC+C+ + D
Sbjct: 428 G-----KWPGQCPCRKGYAGDKCDRCQF-GYR-------GFPNCVPCDCSTVGSVNEDPC 474
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+ C+C+ N G+NC+RC G+Y N E C +C C
Sbjct: 475 TEPCLCKKNVEGENCDRCKPGFY-NLKERNPEGCSECFC 512
Score = 155 (59.6 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 51/181 (28%), Positives = 72/181 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C G CERCA GYYGN T C C C +D + + + T +K
Sbjct: 826 CAPGYSGAWCERCADGYYGNPTVPGGT-CVPCNCSGN-----VDPLEAGHCDSVTGECLK 879
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC--NGH-ADICDAESGRCI 123
T G R G++ + + C CNC NG + IC E+G C
Sbjct: 880 CLWN---TDGAHCERCAD----GFYGDAVTA---KNCRACNCHENGSLSGICHLETGLCD 929
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
C+ G C++C GYYG L+ + C C C +G ++ C C G G+
Sbjct: 930 CKPYVTGQQCDQCLPGYYG--LDTGL-GCVPCNCSGEGSISDNCTEEGQC-HCVPGVSGK 985
Query: 184 K 184
+
Sbjct: 986 Q 986
Score = 144 (55.7 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 36/111 (32%), Positives = 48/111 (43%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICD--AESGRCICQDNTGGDNCERCARGYYGNA 144
L GY+ T G CVPCNC+G I D E G+C C G C++C+ G+Y
Sbjct: 943 LPGYYGLDTGLG----CVPCNCSGEGSISDNCTEEGQCHCVPGVSGKQCDQCSHGFYAFQ 998
Query: 145 LEGAVT-DCK--QCPC-PNQGPCVQLDDDQ-VVCSECPRGYGGEKMSPGAQ 190
G DC Q C P+ G C+ + C +C + G G Q
Sbjct: 999 NGGCTPCDCAHTQNNCDPDSGECLCPPHTHGLKCEQCEEAFWGLDPEQGCQ 1049
Score = 137 (53.3 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C PC+C + CD +SG C+C +T G CE+C ++G E C+ C C G
Sbjct: 1002 CTPCDCAHTQNNCDPDSGECLCPPHTHGLKCEQCEEAFWGLDPEQG---CQACNCSVVGS 1058
Query: 163 CV-QLDDDQVVCSECPRGYGGE 183
Q D CS C G+GG+
Sbjct: 1059 TSPQCDVLSGQCS-CKEGFGGQ 1079
Score = 126 (49.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 45/165 (27%), Positives = 63/165 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C +T G CE+C ++G E C+ C C G Q L +
Sbjct: 1021 CLCPPHTHGLKCEQCEEAFWGLDPEQG---CQACNCSVVGST----SPQCDVLSGQCSC- 1072
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GH-ADICDAE--- 118
K GG + H GY +F CVPC+C+ G AD CD E
Sbjct: 1073 -KEGFGG---------QSCHQCSLGYR-------SFPDCVPCDCDLRGTLADTCDLEQGL 1115
Query: 119 ------SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
SG C C++N G C++C G + + + C C C
Sbjct: 1116 CSCTEDSGTCSCKENVLGPQCDKCRAGTFALRADNPL-GCSPCFC 1159
Score = 122 (48.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
+C+ C+D+T GD+CE C GYYG + G DC C CP+ P
Sbjct: 1425 KCLNCRDHTAGDHCELCTAGYYGKVI-GLPGDCTPCTCPHHPP 1466
Score = 118 (46.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C CNC+ G CD SG+C C++ GG +C +C+ GY + DC C C
Sbjct: 1048 CQACNCSVVGSTSPQCDVLSGQCSCKEGFGGQSCHQCSLGYR------SFPDCVPCDCDL 1101
Query: 160 QGPCVQLDD-DQVVCSECPRGYG 181
+G D +Q +CS C G
Sbjct: 1102 RGTLADTCDLEQGLCS-CTEDSG 1123
Score = 112 (44.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 89 GYHHEP-TSGGAFSRCVPCNCNG--HADICDAESGRCICQDNTGGDNCERC 136
GYH P +GG+ +C CN G H+D CD SG+C+C+ G +CE C
Sbjct: 1501 GYHGNPRAAGGSCQKC-DCNPQGSVHSD-CDRASGQCVCKPGATGLHCEEC 1549
Score = 74 (31.1 bits), Expect = 5.7e-23, Sum P(2) = 5.7e-23
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ G C++C GYYG L+ + C C C +G
Sbjct: 928 CDCKPYVTGQQCDQCLPGYYG--LDTGL-GCVPCNCSGEG 964
Score = 67 (28.6 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 5 CICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPC 40
C C G +CE C GYY L G + C+ C C
Sbjct: 716 CECPQGYTGTSCEACLPGYYRVDGILFGGI--CQPCEC 751
Score = 40 (19.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 7/16 (43%), Positives = 7/16 (43%)
Query: 173 CSECPRGYGGEKMSPG 188
C C GY G PG
Sbjct: 835 CERCADGYYGNPTVPG 850
Score = 37 (18.1 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 173 CSECPRGYGGEKMSPG 188
C C GY G + G
Sbjct: 1495 CERCSAGYHGNPRAAG 1510
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 252 (93.8 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 63/186 (33%), Positives = 87/186 (46%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNLGNRTRIRI 65
CQ T GD+CERC GYYGNA G DC C CP ++S G++
Sbjct: 1828 CQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHCEC 1887
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-----ICDAESG 120
K G R A G++ EP S G C PC C+G+ + CD +G
Sbjct: 1888 KPGYTGPRCESCA---------NGFYGEPESIGQV--CKPCECSGNINPEDQGSCDTRTG 1936
Query: 121 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-VCSECPR 178
C+ C +NT G C CA G+YG+A++ + +C+ C C + G Q D V VC+ C
Sbjct: 1937 ECLRCLNNTFGAACNLCAPGFYGDAIK--LKNCQSCDCDDLG--TQTCDPFVGVCT-CHE 1991
Query: 179 GYGGEK 184
G++
Sbjct: 1992 NVIGDR 1997
Score = 235 (87.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 46/105 (43%), Positives = 58/105 (55%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ +P SG C+PC CNGH++ CD +G C CQ T GD+CERC GYYGNA G
Sbjct: 1793 GYYRDP-SGPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNG 1851
Query: 148 AVTDCKQCPCP------NQGPCVQLDD--DQVVCSECPRGYGGEK 184
DC C CP N ++ + DQ+ C EC GY G +
Sbjct: 1852 TPGDCMICACPLPFDSNNFATSCEISESGDQIHC-ECKPGYTGPR 1895
Score = 170 (64.9 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 54/182 (29%), Positives = 71/182 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDDDQVSNLGNRTRI 63
C C+ G CE CA G+YG E CK C C N P +DQ S RT
Sbjct: 1885 CECKPGYTGPRCESCANGFYGEP-ESIGQVCKPCECSGNINP-----EDQGS-CDTRTGE 1937
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADICDAESGRC 122
++ N T G A + G++ + C C+C+ CD G C
Sbjct: 1938 CLRCL---NNTFGAAC----NLCAPGFYGDAIK---LKNCQSCDCDDLGTQTCDPFVGVC 1987
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C +N GD C+RC +YG E V C+ C C Q D C+ C G G
Sbjct: 1988 TCHENVIGDRCDRCKPDHYG--FESGV-GCRACDCGAASNSTQCDPHTGHCA-CKSGVTG 2043
Query: 183 EK 184
+
Sbjct: 2044 RQ 2045
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/188 (26%), Positives = 79/188 (42%)
Query: 3 RRCICQDN-TGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG-P-CVQLDDDQVSNLGN 59
R C C N T G +CE + + A CKQC G P C + +++ ++ N
Sbjct: 446 RECECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITN 505
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH---ADICD 116
+ G R H GY + PT C C+C+ ++IC+
Sbjct: 506 DCNVTTGECKCLTNFGGDNCERCKH----GYFNYPT-------CSYCDCDNQGTESEICN 554
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
+SG+CIC++ GG C++C G+Y DCK C C + G D+ C+ C
Sbjct: 555 KQSGQCICREGFGGPRCDQCLPGFYN------YPDCKPCNCSSTGSSAITCDNTGKCN-C 607
Query: 177 PRGYGGEK 184
+ G++
Sbjct: 608 LNNFAGKQ 615
Score = 138 (53.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 54/204 (26%), Positives = 80/204 (39%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCP-NQGPCVQLDDDQVSNLGN 59
C CQ +T G C C G+ + +C+ C C + C D++V+ G
Sbjct: 296 CRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKY--DEEVNRKGL 353
Query: 60 RTRIRIKSALGG------NRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCN-- 109
I GG + T G+ + +Y+ G H T C PC C+
Sbjct: 354 SLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDV-----CSPCQCDYF 408
Query: 110 ---GHADICDAESGRCICQDNTGGDNCERCARGYYG--NALEGAV----TDCKQCPCPN- 159
GH C+ E+G C C+ +C+ CA GYYG N E T+ C +
Sbjct: 409 FSTGH---CEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECNLNGTNGYHCEAESG 465
Query: 160 -QGPCVQLDDDQVVCSECPRGYGG 182
Q PC +++ C +C GY G
Sbjct: 466 QQCPC-KINFAGAYCKQCAEGYYG 488
Score = 124 (48.7 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 24/62 (38%), Positives = 31/62 (50%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
F C PC C A +C+ +G C+C N GD CE+CA YG V C++C C
Sbjct: 1415 FPDCKPCKCPNSA-MCEPTTGECMCPPNVIGDLCEKCAPNTYGFH---QVIGCEECACNP 1470
Query: 160 QG 161
G
Sbjct: 1471 MG 1472
Score = 111 (44.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 30/93 (32%), Positives = 37/93 (39%)
Query: 101 SRCVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
S +PCNC+ G C G+C C+ N C C YYG DCK C C
Sbjct: 1370 SGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYG------FPDCKPCKC 1423
Query: 158 PNQGPCVQLDDD-----QVV---CSEC-PRGYG 181
PN C + V+ C +C P YG
Sbjct: 1424 PNSAMCEPTTGECMCPPNVIGDLCEKCAPNTYG 1456
Score = 107 (42.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 100 FSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
F C C+C+ G ++CD G C C+ N G +C++C G Y N E C C
Sbjct: 1508 FPHCEQCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTY-NLQESNPDGCTTCF 1566
Query: 157 C 157
C
Sbjct: 1567 C 1567
Score = 99 (39.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 21/70 (30%), Positives = 29/70 (41%)
Query: 92 HEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
H G R C ++ CD +G C C+ G C+RCA ++ +G
Sbjct: 2005 HYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDG---- 2060
Query: 152 CKQCPCPNQG 161
C C C NQG
Sbjct: 2061 CTPCNC-NQG 2069
Score = 96 (38.9 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 103 CVPCNCN--GHAD---ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C C CN G A+ CD +G C C+ N G C+ C+ GY+ C+QC C
Sbjct: 1463 CEECACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFN------FPHCEQCSC 1516
Query: 158 PNQGPCVQLDD 168
G +++ D
Sbjct: 1517 HKPGTELEVCD 1527
Score = 94 (38.1 bits), Expect = 0.00079, Sum P(2) = 0.00078
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 103 CVPCNC--NGHA---DICDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCP 156
C C+C +G D C ++SG+C C+ +T G C+ C G + L+ A + CK C
Sbjct: 729 CEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFD--LDSASLFGCKDCS 786
Query: 157 C 157
C
Sbjct: 787 C 787
Score = 93 (37.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 103 CVPCNCN-GHADI--CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C PCNCN G++ C+ +G+C C GD C+ C + EG +C C
Sbjct: 2061 CTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEGC-QECNNC 2115
Score = 90 (36.7 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 21/63 (33%), Positives = 26/63 (41%)
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
RC C G +CE CA GYY + C C C G D +CS+C G
Sbjct: 1775 RCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCEC--NGHSETCDCATGICSKCQHGT 1832
Query: 181 GGE 183
G+
Sbjct: 1833 EGD 1835
Score = 80 (33.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C+C N GD CE+CA YG V C++C C G
Sbjct: 1436 CMCPPNVIGDLCEKCAPNTYGFH---QVIGCEECACNPMG 1472
Score = 80 (33.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C C+ N C C YYG DCK C CPN C
Sbjct: 1393 QCQCKPNVIERTCGACRSRYYG------FPDCKPCKCPNSAMC 1429
Score = 73 (30.8 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C+CQ N G C+ C G+Y C+ C C G
Sbjct: 649 QCLCQPNFDGRQCDSCKEGFYN------FPSCEDCNCDPAG 683
Score = 73 (30.8 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C +N G C C GYY + DC C C + G
Sbjct: 604 KCNCLNNFAGKQCTLCTAGYY------SYPDCLPCHCDSHG 638
Score = 70 (29.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ N G +C++C G Y N E C C C
Sbjct: 1533 CFCKKNVVGRDCDQCVDGTY-NLQESNPDGCTTCFC 1567
Score = 70 (29.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C C+ N G C+ C+ GY+ C+QC C G +++ D
Sbjct: 1487 CECRQNIEGRACDVCSNGYFN------FPHCEQCSCHKPGTELEVCD 1527
Score = 70 (29.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC C G +CE CA GYY + C C C
Sbjct: 1775 RCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCEC 1811
Score = 67 (28.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPCVQLDDDQVS 55
+C C+ +T G C+ C G + L+ A + CK C C + G Q D++S
Sbjct: 752 QCPCKPHTQGRRCQECRDGTFD--LDSASLFGCKDCSC-DVGGSWQSVCDKIS 801
Score = 56 (24.8 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 13/46 (28%), Positives = 17/46 (36%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 50
C C++ G C C + Y N C+ C C G LD
Sbjct: 700 CKCKERVTGRICNEC-KPLYWNLNISNTEGCEICDCWTDGTISALD 744
Score = 45 (20.9 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 10 NTGGDNCERCARGYYG--NALEGAVTDCKQCPC-PN-QGP-CVQLDD 51
NT G CE C G +AL+ + QCPC P+ QG C + D
Sbjct: 725 NTEG--CEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Score = 38 (18.4 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 103 CVPCNCNGHADICDA 117
C C C G CD+
Sbjct: 1562 CTTCFCFGKTSRCDS 1576
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 224 (83.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 44/102 (43%), Positives = 60/102 (58%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHA+ CD ++G+C+ C+D+T G NCERC GYYG+ + G+ C+ C CP
Sbjct: 857 FPNCRPCTCNGHAEQCDPQTGQCLSCRDHTTGHNCERCLGGYYGDPVLGSGDHCRPCMCP 916
Query: 159 N--------QGPCVQL-DDDQVVCSECPRGYGG---EKMSPG 188
+ G C + D QV C C +GY G E+ +PG
Sbjct: 917 DGPGSGRQFSGACYKSPDSSQVFCV-CNQGYKGARCEECAPG 957
Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 55/187 (29%), Positives = 77/187 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C G CE CA GYYGN E +C+ C C + + + D + + ++
Sbjct: 940 CVCNQGYKGARCEECAPGYYGNPHEVG-GECRPCQCNSN---IDMMDPESCDARTGACVK 995
Query: 65 IKSALGG---NRTR----GLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCNCNGHADICD 116
G NR R G ALT+ + G C P NCN CD
Sbjct: 996 CLYHTEGESCNRCRLGYYGNALTQSCRKCVCNQ-----MGTVEEMCPSPGNCN-----CD 1045
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLDDDQVVCSE 175
SG+C+C N G +C++CA + N G C+ C C PN ++ CS
Sbjct: 1046 LTSGQCLCLPNVVGQHCDQCAPDTW-NMASGK--GCEDCDCDPNHSFGSSCNEIMGQCS- 1101
Query: 176 CPRGYGG 182
C G+GG
Sbjct: 1102 CKPGFGG 1108
Score = 168 (64.2 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 49/168 (29%), Positives = 72/168 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P----NQGPCVQLDDDQVSNLG 58
CQ NT G NCE+C + ++ E + D C+ C C P N G C + D + +
Sbjct: 362 CQHNTMGHNCEQC-KPFFHQHPEKDIRDPNICEPCNCDPVGSLNGGVCDPMTDVSLGLIS 420
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
+ R K + G R +Q HY G +P C PC CN +
Sbjct: 421 GQCRC--KPNVEGERCDQC---KQGHY---GLSEDPLG------CQPCTCNALGTVPGGS 466
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
CD +SG C C+ G NC++C ++G L + C+ C C + G
Sbjct: 467 PCDTDSGNCYCKRLVTGRNCDQCLPQHWG--LSNDMDGCRPCDCDHGG 512
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 55/201 (27%), Positives = 72/201 (35%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR--- 60
+C C G C+RC GY+G +C+ C C G Q D L R
Sbjct: 835 QCECIAGAYGRQCDRCLPGYWG------FPNCRPCTC--NGHAEQCDPQTGQCLSCRDHT 886
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
T + LGG + L H + P SG FS C D +
Sbjct: 887 TGHNCERCLGGYYGDPV-LGSGDHCRPCMCPDGPGSGRQFSGA----CYKSPD---SSQV 938
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQ-----GPCVQL- 166
C+C G CE CA GYYGN E +C+ C C P G CV+
Sbjct: 939 FCVCNQGYKGARCEECAPGYYGNPHEVG-GECRPCQCNSNIDMMDPESCDARTGACVKCL 997
Query: 167 -DDDQVVCSECPRGYGGEKMS 186
+ C+ C GY G ++
Sbjct: 998 YHTEGESCNRCRLGYYGNALT 1018
Score = 114 (45.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/103 (29%), Positives = 43/103 (41%)
Query: 103 CVPCNCN--G--HADICDAE--------SGRCICQDNTGGDNCERCARGYYGNALEGAVT 150
C PCNC+ G + +CD SG+C C+ N G+ C++C +G+YG L
Sbjct: 392 CEPCNCDPVGSLNGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYG--LSEDPL 449
Query: 151 DCKQCPC------PNQGPCVQLDDDQVVCSECPRGYGGEKMSP 187
C+ C C P PC D C G ++ P
Sbjct: 450 GCQPCTCNALGTVPGGSPC-DTDSGNCYCKRLVTGRNCDQCLP 491
Score = 112 (44.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 103 CVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-- 157
C PC+C+ + C +G+C C G C+RC GY+G +C+ C C
Sbjct: 814 CRPCDCSPEGSVHSYCHEATGQCECIAGAYGRQCDRCLPGYWG------FPNCRPCTCNG 867
Query: 158 ------PNQGPCVQLDDDQVV--CSECPRGYGGE 183
P G C+ D C C GY G+
Sbjct: 868 HAEQCDPQTGQCLSCRDHTTGHNCERCLGGYYGD 901
Score = 104 (41.7 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 26/89 (29%), Positives = 38/89 (42%)
Query: 106 CNCNGHAD---ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C C+ +CD G+C C+ N G NC+RCA + +G C+ C C +G
Sbjct: 769 CQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDRCAPATFLFXPQG----CRPCDCSPEGS 824
Query: 163 CVQLDDDQVVCSECPRG-YGGE--KMSPG 188
+ EC G YG + + PG
Sbjct: 825 VHSYCHEATGQCECIAGAYGRQCDRCLPG 853
Score = 102 (41.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 102 RCVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
+C C+C+ G A+ C+ +G C+C + G C+ CARGY G + C QC
Sbjct: 1125 KCHACDCDPRGIAEQQCNKVTGHCVCVEGVSGPRCDTCARGYTGEFPQ--CERCHQC 1179
Score = 101 (40.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/93 (30%), Positives = 41/93 (44%)
Query: 103 CVPCNCN-GHA--DICDAESGRCICQDNTGGDNCERCARGYYGNA-LEGAVTDC------ 152
C C+C+ H+ C+ G+C C+ GG C C ++GN ++ DC
Sbjct: 1078 CEDCDCDPNHSFGSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIA 1137
Query: 153 -KQCPCPNQGPCVQLDD-DQVVCSECPRGYGGE 183
+QC G CV ++ C C RGY GE
Sbjct: 1138 EQQCNKVT-GHCVCVEGVSGPRCDTCARGYTGE 1169
Score = 84 (34.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLD 50
C+C NT G NCERC Y+ EG T+ CK+C C + D
Sbjct: 295 CMCNHNTIGLNCERCQDFYHDLPWRPAEGRNTNACKKCHCNHHSHSCHFD 344
Score = 72 (30.4 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G NC+RCA + +G C+ C C +G
Sbjct: 787 QCQCRPNVVGRNCDRCAPATFLFXPQG----CRPCDCSPEG 823
Score = 69 (29.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PN 42
+C+C N G +C++CA + N G C+ C C PN
Sbjct: 1050 QCLCLPNVVGQHCDQCAPDTW-NMASGK--GCEDCDCDPN 1086
Score = 35 (17.4 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCK 36
++C C ++ + + GN G DC+
Sbjct: 330 KKCHCNHHSHSCHFDMAVYRASGNVSGGVCDDCQ 363
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 232 (86.7 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 49/108 (45%), Positives = 64/108 (59%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + S RCVPCNCNGH++ C SG CI CQ NT G++CERC G+YGNA+ G
Sbjct: 1671 GYYWDNKSLPV-GRCVPCNCNGHSNRCQDGSGICINCQHNTAGEHCERCQAGHYGNAIHG 1729
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ CPCP+ C +D V C+ C GY G E+ +PG
Sbjct: 1730 S---CRVCPCPHTNSFATGCA-VDGGAVRCA-CKPGYTGTQCERCAPG 1772
Score = 179 (68.1 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 49/153 (32%), Positives = 65/153 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGPCVQLDDDQVSNLGN 59
RC CQ +T GD C RC GY + A +C+ C C D D V +
Sbjct: 315 RCECQHHTCGDTCNRCCAGYNQRRWQPAGQEQHNECEACNCHGHAVDCYYDPD-VEH--Q 371
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR----------CVPCNCN 109
+ + K G G+ + Q + G + E + G F C+PC+C+
Sbjct: 372 QASLNSKGVYAGG---GVCINCQ--HNTAGVNCEKCAKGYFRPHGVPVDALHGCIPCSCD 426
Query: 110 GH-ADICDAESGRCICQDNTGGDNCERCARGYY 141
AD CD SG C C+ N GD CE CA GYY
Sbjct: 427 PERADDCDQGSGHCHCKPNFSGDYCETCADGYY 459
Score = 174 (66.3 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 46/134 (34%), Positives = 58/134 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT G++CERC G+YGNA+ G+ C+ CPCP+ V G R
Sbjct: 1703 CINCQHNTAGEHCERCQAGHYGNAIHGS---CRVCPCPHTNSFAT--GCAVD--GGAVRC 1755
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K G + A GY P GG+ C CN NG CD +G C
Sbjct: 1756 ACKPGYTGTQCERCA---------PGYFGNPQKFGGSCQPC-NCNSNGQLGPCDPLTGDC 1805
Query: 123 ICQDNTGGDNCERC 136
+ Q+ G E C
Sbjct: 1806 VNQEPKDGSPAEEC 1819
Score = 156 (60.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 52/187 (27%), Positives = 73/187 (39%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPC-PNQGPCVQLDDDQVSNLGN 59
CI CQ NT G NCE+CA+GY+ G ++ A+ C C C P + N
Sbjct: 387 CINCQHNTAGVNCEKCAKGYFRPHGVPVD-ALHGCIPCSCDPERADDCDQGSGHCHCKPN 445
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA-DICDAE 118
+ ++ G L T +P +G C CN G +ICD +
Sbjct: 446 FSGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGN-IKGC-DCNLEGVLPEICD-D 502
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVVCSECP 177
GRC+C+ G C+ C G Y + C+ C C G V D C +C
Sbjct: 503 RGRCLCRPGVEGPQCDSCRSGSYSFPI------CQACQCSTIGSYPVPCDPGNGQC-DCL 555
Query: 178 RGYGGEK 184
G G +
Sbjct: 556 PGITGRQ 562
Score = 148 (57.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/173 (29%), Positives = 68/173 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C + GD+C+ C GYY + V C C C N G+ R +
Sbjct: 1654 CACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNC-N---------------GHSNRCQ 1697
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC-NCNGHADICDAESG--R 121
S + N A Q G++ G R PC + N A C + G R
Sbjct: 1698 DGSGICINCQHNTAGEHCERCQ-AGHYGNAIHGSC--RVCPCPHTNSFATGCAVDGGAVR 1754
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG---PCVQLDDDQV 171
C C+ G CERCA GY+GN + + C+ C C + G PC L D V
Sbjct: 1755 CACKPGYTGTQCERCAPGYFGNPQKFGGS-CQPCNCNSNGQLGPCDPLTGDCV 1806
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 37/118 (31%), Positives = 52/118 (44%)
Query: 63 IRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+R + LG R +TR+ +Y + + + GG RCV CNGHA+ C A++
Sbjct: 260 LRTNTLLGHLISKAERDPTVTRRYYYSIK----DISVGG---RCV---CNGHAEACSADN 309
Query: 120 G----RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGPCVQLDDD 169
RC CQ +T GD C RC GY + A +C+ C C D D
Sbjct: 310 PEKQFRCECQHHTCGDTCNRCCAGYNQRRWQPAGQEQHNECEACNCHGHAVDCYYDPD 367
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLDDDQVSNLGNRTRI 63
C C+ N GD CE CA GYY C + P PN P + D N+
Sbjct: 440 CHCKPNFSGDYCETCADGYYNFPF------CLRIPVFPNYTPSPE--DPVAGNIKG-CDC 490
Query: 64 RIKSALGGN-RTRGLALTRQTHYQLTGYHHEPTSGGAFSR--CVPCNCN--GHADI-CDA 117
++ L RG L R + G + G++S C C C+ G + CD
Sbjct: 491 NLEGVLPEICDDRGRCLCRPG---VEGPQCDSCRSGSYSFPICQACQCSTIGSYPVPCDP 547
Query: 118 ESGRCICQDNTGGDNCERCARGYY 141
+G+C C G C+RC G Y
Sbjct: 548 GNGQCDCLPGITGRQCDRCLSGAY 571
Score = 118 (46.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 102 RCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARG-YYGNALEGAVTDCKQCPC 157
+CVPC+CN G +CD E+G C+C++N G C+ C G +Y + C +C C
Sbjct: 1400 KCVPCSCNRDGTEPSVCDPETGACMCKENVEGPQCQLCREGSFYLDPTNPK--GCTKCFC 1457
Score = 105 (42.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/95 (29%), Positives = 39/95 (41%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
F C PCNC +C+ +G+C+C +T CE C + V C C C
Sbjct: 1304 FPYCKPCNCGRR--LCEEVTGKCLCPPHTVRPQCEVCEMNSFNFH---PVAGCDVCNCSR 1358
Query: 160 QGPCV----QLDDDQVVCSECPR--GYGGEKMSPG 188
+G + D D C PR G +K +PG
Sbjct: 1359 KGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAPG 1393
Score = 100 (40.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 26/103 (25%), Positives = 40/103 (38%)
Query: 86 QLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDAESGRCICQDNTGGDNCERCARG 139
++ ++ P +G C CNC+ I CD +SG+C C+ G C++CA G
Sbjct: 1339 EMNSFNFHPVAG-----CDVCNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAPG 1393
Query: 140 YYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
L+ C C C G + D + C G
Sbjct: 1394 LLPVPLK-----CVPCSCNRDGTEPSVCDPETGACMCKENVEG 1431
Score = 65 (27.9 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYG----NALEGAVTDCKQCPC-PNQGPC 46
RC+C+ G C+ C G Y A + + PC P G C
Sbjct: 505 RCLCRPGVEGPQCDSCRSGSYSFPICQACQCSTIGSYPVPCDPGNGQC 552
Score = 58 (25.5 bits), Expect = 7.6e-22, Sum P(3) = 7.6e-22
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 5 CICQDNTGGDNCERCARG-YYGNALEGAVTDCKQCPC 40
C+C++N G C+ C G +Y + C +C C
Sbjct: 1423 CMCKENVEGPQCQLCREGSFYLDPTNPK--GCTKCFC 1457
Score = 57 (25.1 bits), Expect = 9.6e-22, Sum P(3) = 9.6e-22
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C++CA G L+ C C C G
Sbjct: 1375 QCRCKPRVTGQQCDKCAPGLLPVPLK-----CVPCSCNRDG 1410
Score = 51 (23.0 bits), Expect = 4.0e-21, Sum P(3) = 4.0e-21
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C+C +T CE C + V C C C +G
Sbjct: 1323 KCLCPPHTVRPQCEVCEMNSFNFH---PVAGCDVCNCSRKG 1360
Score = 48 (22.0 bits), Expect = 8.1e-21, Sum P(3) = 8.1e-21
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C G C+RC G Y
Sbjct: 551 QCDCLPGITGRQCDRCLSGAY 571
Score = 43 (20.2 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 52 DQVSNLGNRTRIRIKS-ALGGNRTRGLALTRQTHYQLTGYH 91
D+VS+ G KS L G+ + L +Q QLTG H
Sbjct: 1527 DKVSSYGGYLTYHAKSFGLPGDM---VLLGKQPDVQLTGQH 1564
Score = 38 (18.4 bits), Expect = 8.6e-20, Sum P(3) = 8.6e-20
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 12 GGDNCERCARGYYGNALEGAVTDCK----QCPC 40
G D C C+R +E AV++C QC C
Sbjct: 1350 GCDVCN-CSRK---GTIEAAVSECDRDSGQCRC 1378
Score = 38 (18.4 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 127 NTGGDNCERCA 137
NT GD RCA
Sbjct: 2162 NTSGDELVRCA 2172
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 245 (91.3 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 68/211 (32%), Positives = 94/211 (44%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP------NQGPCVQLDDDQVSNL 57
C+ C NT G +C++C G+YG+A EG DC++C CP N P QL
Sbjct: 760 CLGCAHNTTGPHCDQCLPGFYGDASEGTPDDCQRCSCPLTLASNNFSPTCQLQAP----- 814
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--- 114
G + +S G++ + A GY EP G RC PC CNG+ D
Sbjct: 815 GEFICDQCQSGYTGDKCQRCA---------DGYFGEPVVPG--QRCSPCECNGNVDPSEA 863
Query: 115 --CDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP----CVQLD 167
CD +G C+ C +T G +CERC GYYG+A++ +C+ C C + G C +
Sbjct: 864 GRCDTHTGECLKCVGHTAGPHCERCRDGYYGDAIQEK--NCQACGCYSNGSLSTICNLIT 921
Query: 168 DD-----QVV---CSECPRGYGGEKMSPGAQ 190
VV C C GY G G +
Sbjct: 922 GQCECKHNVVGKTCDRCQEGYHGINSGEGCR 952
Score = 210 (79.0 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 37/86 (43%), Positives = 49/86 (56%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
CVPC C+ H+ CD +G+C+ CQ NT G++C CA GYYG ++G+V+DC C CP +G
Sbjct: 1404 CVPCRCSNHSQSCDLHTGQCLGCQHNTAGEHCHVCAAGYYGK-VQGSVSDCSLCACPLRG 1462
Query: 162 P-----CVQLDDDQVVCSECPRGYGG 182
CV C C GY G
Sbjct: 1463 QSFSSTCVLEGAGDFRCDRCEEGYEG 1488
Score = 209 (78.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 38/90 (42%), Positives = 52/90 (57%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP--- 158
C+PC CN HA CD +G C+ C NT G +C++C G+YG+A EG DC++C CP
Sbjct: 742 CLPCECNDHATECDI-NGECLGCAHNTTGPHCDQCLPGFYGDASEGTPDDCQRCSCPLTL 800
Query: 159 ---NQGPCVQLD-DDQVVCSECPRGYGGEK 184
N P QL + +C +C GY G+K
Sbjct: 801 ASNNFSPTCQLQAPGEFICDQCQSGYTGDK 830
Score = 181 (68.8 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 44/137 (32%), Positives = 64/137 (46%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C+ CQ NT G++C CA GYYG ++G+V+DC C CP +G + G+
Sbjct: 1422 QCLGCQHNTAGEHCHVCAAGYYGK-VQGSVSDCSLCACPLRGQSFS-STCVLEGAGDFRC 1479
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHA-DICDAES 119
R + G A+ GY P+ G RC C C+ G +CDA +
Sbjct: 1480 DRCEEGYEGRYCERCAV---------GYFGNPSEPGG--RCQVCACSESGSVHSVCDAHT 1528
Query: 120 GRCICQDNTGGDNCERC 136
GRC C+ G C++C
Sbjct: 1529 GRCECKPGVRGHLCDQC 1545
Score = 144 (55.7 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 54/163 (33%), Positives = 72/163 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
CIC +T G CE+C G++G+ +G V+ CK C C G D +S+ G +
Sbjct: 1017 CICPPHTHGLKCEQCDEGHWGH--DG-VSGCKVCNCSVVGSSSSQCD--LSS-G-----Q 1065
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADICDA------ 117
AL + GL R GY + P S C CN NG A CD
Sbjct: 1066 CVCAL---QFSGLTCDRCA----LGYRNFPQC----SAC-DCNPNGTRAQFCDEALGVCG 1113
Query: 118 --ESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPC 157
+ G+C C+DN GG C+ C G +G +AL A C C C
Sbjct: 1114 CEDHGQCSCKDNVGGRGCDECKSGSFGLSALNPA--GCSPCFC 1154
Score = 142 (55.0 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 48/163 (29%), Positives = 68/163 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYYG--NALEGAVTDCKQCPCPNQG---P-CVQLDDDQVSNL 57
C+ C+ NT G NCE CA GYY A C +C C +G P C++ D+ +
Sbjct: 368 CVNCRHNTAGVNCETCADGYYRPHQVSPYAEEPCVECQCDMRGSVSPVCIRDDNHANPDA 427
Query: 58 G-NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-H-ADI 114
G + + K G + A G+ P SRC CN +G H D
Sbjct: 428 GLSPGQCVCKEGFAGEKCDRCAF---------GFRDFPVC----SRC-ECNLDGSHNTDP 473
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C C+C+ N G +C+ C +G+Y N C +C C
Sbjct: 474 CM----ECVCKANVMGSHCDLCKQGFY-NLQASNPEGCTECFC 511
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 55/204 (26%), Positives = 82/204 (40%)
Query: 7 CQDNTGGD-----NCERCARGYYGNALEGAVTDC--KQCPCPNQ--GP-CVQLDDDQVS- 55
C+D GD NC+ C G Y N + + QC C + G C + +
Sbjct: 888 CRDGYYGDAIQEKNCQAC--GCYSNGSLSTICNLITGQCECKHNVVGKTCDRCQEGYHGI 945
Query: 56 NLGNRTR---IRIKSALGGN---RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC- 108
N G R AL + R +T T + HH + + C C+C
Sbjct: 946 NSGEGCRPCECNQSGALSASCDEEGRCQCITGVTGDKCDRCHHGYYNFKE-NGCTACDCA 1004
Query: 109 NGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---------- 158
+ H + C+ ++G CIC +T G CE+C G++G+ +G V+ CK C C
Sbjct: 1005 HTHGN-CNGQTGECICPPHTHGLKCEQCDEGHWGH--DG-VSGCKVCNCSVVGSSSSQCD 1060
Query: 159 -NQGPCV-QLDDDQVVCSECPRGY 180
+ G CV L + C C GY
Sbjct: 1061 LSSGQCVCALQFSGLTCDRCALGY 1084
Score = 111 (44.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 27/77 (35%), Positives = 34/77 (44%)
Query: 101 SRCVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
S C CNC+ G + CD SG+C+C G C+RCA GY C C C
Sbjct: 1042 SGCKVCNCSVVGSSSSQCDLSSGQCVCALQFSGLTCDRCALGYRN------FPQCSACDC 1095
Query: 158 PNQGPCVQLDDDQV-VC 173
G Q D+ + VC
Sbjct: 1096 NPNGTRAQFCDEALGVC 1112
Score = 100 (40.3 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 32/119 (26%), Positives = 47/119 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLG--NRT 61
+C+C G C+RCA GY C C C G Q D+ + G +
Sbjct: 1065 QCVCALQFSGLTCDRCALGYRN------FPQCSACDCNPNGTRAQFCDEALGVCGCEDHG 1118
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
+ K +GG RG + + L+ + P C PC C G +D+C+ SG
Sbjct: 1119 QCSCKDNVGG---RGCDECKSGSFGLSALN--PAG------CSPCFCFGLSDVCEELSG 1166
Score = 91 (37.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 4 RCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQGPCVQLDDDQ 53
+C C+ N G C+RC GY+G N+ EG C+ C C NQ + D+
Sbjct: 923 QCECKHNVVGKTCDRCQEGYHGINSGEG----CRPCEC-NQSGALSASCDE 968
Score = 91 (37.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 28/84 (33%), Positives = 37/84 (44%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--GHA-DICDAESGRCICQDNTGGDNCERCARGYYGNAL 145
GY P+ G RC C C+ G +CDA +GRC C+ G C++C
Sbjct: 1497 GYFGNPSEPGG--RCQVCACSESGSVHSVCDAHTGRCECKPGVRGHLCDQCE-------- 1546
Query: 146 EGAVTDCKQC-PCPNQGPCVQLDD 168
E V +QC C + V LDD
Sbjct: 1547 ERHVLVHEQCVSCNDSCTGVLLDD 1570
Score = 82 (33.9 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 18/44 (40%), Positives = 20/44 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN-QGPC 46
RC C GD C+RC GYY N E C C C + G C
Sbjct: 971 RCQCITGVTGDKCDRCHHGYY-NFKENG---CTACDCAHTHGNC 1010
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 25/84 (29%), Positives = 34/84 (40%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGA--VTDCKQCP---------CPNQGP----CVQLDD 168
CQ NT G++C CA GYYG + C CP C +G C + ++
Sbjct: 1426 CQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCA-CPLRGQSFSSTCVLEGAGDFRCDRCEE 1484
Query: 169 --DQVVCSECPRGYGGEKMSPGAQ 190
+ C C GY G PG +
Sbjct: 1485 GYEGRYCERCAVGYFGNPSEPGGR 1508
Score = 76 (31.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 21/71 (29%), Positives = 26/71 (36%)
Query: 122 CICQDNTGGDNCERCARGYYGNA-----LEGA----VTDCKQCPCPNQGPCVQLDDDQVV 172
C C G +C+ CA GYY A ++G + C C C N L Q
Sbjct: 1365 CECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCSNHSQSCDLHTGQ-- 1422
Query: 173 CSECPRGYGGE 183
C C GE
Sbjct: 1423 CLGCQHNTAGE 1433
Score = 38 (18.4 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 158 PNQGPCVQLDDDQVV 172
PN G C D Q +
Sbjct: 2703 PNSGSCASADHTQTI 2717
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 239 (89.2 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 50/108 (46%), Positives = 65/108 (60%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + S A RCVPCNCNGH++ C SG CI CQ NT G++CERC GYYG+A+ G
Sbjct: 1575 GYYRDIKSFPA-GRCVPCNCNGHSNRCQDGSGVCINCQHNTAGEHCERCQEGYYGSAIHG 1633
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ CPCP+ C +D V C+ C GY G E+ +PG
Sbjct: 1634 S---CRVCPCPHTNSFATGCA-VDGGAVRCA-CKPGYTGAQCERCAPG 1676
Score = 188 (71.2 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 63/212 (29%), Positives = 84/212 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQG-PCVQLDDDQVSNLG 58
RC CQ +T GD C RC GY A D C+ C C C D+ VS
Sbjct: 221 RCKCQHHTCGDTCNRCCAGYNQRPWRPAAQDQHNECEACNCHGHAVDCYY--DEAVSR-- 276
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR----------CVPCNC 108
+ + K G G+ + Q + G + E + G F C+PC+C
Sbjct: 277 QQASLNSKGVYTGG---GVCIDCQ--HNTAGVNCEKCAKGYFRPHGVPVEALHGCIPCSC 331
Query: 109 N-GHADICDAESGRCICQDNTGGDNCERCARGYYG---------------NALEGAVTDC 152
+ AD CD SGRC C+ N GD CE CA GYY N + +
Sbjct: 332 DPDRADECDQGSGRCHCKPNFSGDFCETCADGYYNFPFCLRIPVFPDYTLNPEDPMAGNI 391
Query: 153 KQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
K C C +G ++ DD+ C C G G +
Sbjct: 392 KGCDCNLEGVLPEICDDRGRCL-CRPGVEGPR 422
Score = 176 (67.0 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 46/134 (34%), Positives = 58/134 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT G++CERC GYYG+A+ G+ C+ CPCP+ V G R
Sbjct: 1607 CINCQHNTAGEHCERCQEGYYGSAIHGS---CRVCPCPHTNSFAT--GCAVD--GGAVRC 1659
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K G + A GY P GG+ C CN NG CD +G C
Sbjct: 1660 ACKPGYTGAQCERCA---------PGYFGNPQKFGGSCQPC-NCNSNGQFGTCDPLTGDC 1709
Query: 123 ICQDNTGGDNCERC 136
+ Q+ G E C
Sbjct: 1710 VSQEPKDGSPAEEC 1723
Score = 165 (63.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 54/187 (28%), Positives = 76/187 (40%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPC-PNQGPCVQLDDDQVSNLGN 59
CI CQ NT G NCE+CA+GY+ G +E A+ C C C P++ + N
Sbjct: 293 CIDCQHNTAGVNCEKCAKGYFRPHGVPVE-ALHGCIPCSCDPDRADECDQGSGRCHCKPN 351
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA-DICDAE 118
+ ++ G L T +P +G C CN G +ICD +
Sbjct: 352 FSGDFCETCADGYYNFPFCLRIPVFPDYTLNPEDPMAGN-IKGC-DCNLEGVLPEICD-D 408
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVVCSECP 177
GRC+C+ G C+ C G Y + C+ C C G V D + C EC
Sbjct: 409 RGRCLCRPGVEGPRCDSCRSGSYSFPI------CQACQCSTSGSYPVPCDPETGQC-ECL 461
Query: 178 RGYGGEK 184
G G +
Sbjct: 462 PGVTGRR 468
Score = 145 (56.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 48/160 (30%), Positives = 65/160 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C + GD+C+ C GYY D K P G CV + + G+ R +
Sbjct: 1558 CTCPPDYTGDSCQGCRPGYY--------RDIKSFPA---GRCVPCNCN-----GHSNRCQ 1601
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC-NCNGHADICDAESG--R 121
S + N A Q GY+ G R PC + N A C + G R
Sbjct: 1602 DGSGVCINCQHNTAGEHCERCQ-EGYYGSAIHGSC--RVCPCPHTNSFATGCAVDGGAVR 1658
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
C C+ G CERCA GY+GN + + C+ C C + G
Sbjct: 1659 CACKPGYTGAQCERCAPGYFGNPQKFGGS-CQPCNCNSNG 1697
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 40/121 (33%), Positives = 54/121 (44%)
Query: 63 IRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+R + LG R +TR+ +Y + + + GG RCV CNGHA+ C A++
Sbjct: 166 LRTNTLLGHLISKAERDPTVTRRYYYSIK----DISVGG---RCV---CNGHAEACSADN 215
Query: 120 G----RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDDQV 171
RC CQ +T GD C RC GY A D C+ C C G V D+
Sbjct: 216 PEKQFRCKCQHHTCGDTCNRCCAGYNQRPWRPAAQDQHNECEACNC--HGHAVDCYYDEA 273
Query: 172 V 172
V
Sbjct: 274 V 274
Score = 119 (46.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 86 QLTGYHHEPTSGGA--FSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGY 140
++TG + + G F CVPC+CN G +CD +G C+C++N G C+ C G
Sbjct: 1287 RVTGQQCDKCAPGFYHFPECVPCSCNRDGTEPGVCDPGTGACMCKENVEGPQCQFCREGS 1346
Query: 141 YGNALEGAVTD-CKQCPC 157
+ L+ A + C +C C
Sbjct: 1347 F--YLDSANPEGCTRCFC 1362
Score = 114 (45.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/95 (30%), Positives = 40/95 (42%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
F C PCNC +C+ +G+C+C NT CE C + V C+ C C
Sbjct: 1210 FPHCKPCNCGRR--LCEEVTGKCLCPPNTVRPQCEVCEMNSFNFH---PVAGCEVCNCSR 1264
Query: 160 QGPCV----QLDDDQVVCSECPR--GYGGEKMSPG 188
+G + D D C PR G +K +PG
Sbjct: 1265 KGTVEAAVSECDRDSGQCRCKPRVTGQQCDKCAPG 1299
Score = 106 (42.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 86 QLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDAESGRCICQDNTGGDNCERCARG 139
++ ++ P +G C CNC+ + CD +SG+C C+ G C++CA G
Sbjct: 1245 EMNSFNFHPVAG-----CEVCNCSRKGTVEAAVSECDRDSGQCRCKPRVTGQQCDKCAPG 1299
Query: 140 YYGNALEGAVTDCKQCPCPNQG 161
+Y +C C C G
Sbjct: 1300 FYH------FPECVPCSCNRDG 1315
Score = 71 (30.1 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C C+ + GD C+ CA GY+ +LE + C+ C C
Sbjct: 555 CSCKAHVTGDACDTCADGYF--SLEKSNYFGCQGCQC 589
Score = 67 (28.6 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG----PC 46
RC+C+ G C+ C G Y + C+ C C G PC
Sbjct: 411 RCLCRPGVEGPRCDSCRSGSYSFPI------CQACQCSTSGSYPVPC 451
Score = 66 (28.3 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C++CA G+Y +C C C G
Sbjct: 1281 QCRCKPRVTGQQCDKCAPGFYH------FPECVPCSCNRDG 1315
Score = 63 (27.2 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC 40
C+C++N G C+ C G + L+ A + C +C C
Sbjct: 1328 CMCKENVEGPQCQFCREGSF--YLDSANPEGCTRCFC 1362
Score = 58 (25.5 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C+C NT CE C + V C+ C C +G
Sbjct: 1229 KCLCPPNTVRPQCEVCEMNSFNFH---PVAGCEVCNCSRKG 1266
Score = 49 (22.3 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C G C+RC G Y
Sbjct: 457 QCECLPGVTGRRCDRCLSGAY 477
Score = 38 (18.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 127 NTGGDNCERCA 137
NT GD RCA
Sbjct: 2066 NTSGDELVRCA 2076
Score = 37 (18.1 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 5 CICQDNTGGDNCER 18
C C+++ G C+R
Sbjct: 606 CQCREHIEGKQCQR 619
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 241 (89.9 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 63/200 (31%), Positives = 87/200 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+ NT GD+CE C G+YGNA G+ DC C CP VS G + K
Sbjct: 1849 CEHNTNGDHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVSEEGQLLQCNCK 1908
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGR 121
G+R A +G+ P G C PC CNG+ ++ C SG
Sbjct: 1909 PGYTGDRCDRCA---------SGFFGHPQISG--ESCSPCQCNGNNNLTDSRSCHPNSGD 1957
Query: 122 C-ICQDNTGGDNCERCARGYYGNALEG---AVTDCKQCP---CPNQ-GPC---VQLDDDQ 170
C +C+ NT G +CE CA +YG+A+ + +C QC C N+ G C + ++ D
Sbjct: 1958 CYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDS 2017
Query: 171 VVCSECPRGYGGEKMSPGAQ 190
C C + G G Q
Sbjct: 2018 --CDRCKPDHWGFSKCQGCQ 2035
Score = 226 (84.6 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 43/104 (41%), Positives = 57/104 (54%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALE 146
+GYH SG CVPC CNGH+ CD ++G C C+ NT GD+CE C G+YGNA
Sbjct: 1813 SGYHRVQ-SGSFLGACVPCECNGHSATCDPDTGICTDCEHNTNGDHCEFCNEGHYGNATN 1871
Query: 147 GAVTDCKQCPCP----NQ--GPCVQLDDDQVVCSECPRGYGGEK 184
G+ DC C CP N C ++ Q++ C GY G++
Sbjct: 1872 GSPYDCMACACPFAPTNNFAKSCDVSEEGQLLQCNCKPGYTGDR 1915
Score = 170 (64.9 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 55/193 (28%), Positives = 77/193 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPC-PNQGPC-----VQLDDDQV 54
C C+ NT GD CERC G+ + A C+ C C C V L+ +
Sbjct: 320 CRCEHNTCGDMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNECEYDAEVDLNKQSI 379
Query: 55 SNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHH-EPTSGGAFSRCVPCNCNG--H 111
+ GN + N T G+ + + GY E + C C+C+ H
Sbjct: 380 DSQGNYEGGGVCKNCREN-TEGVNCNKCSF----GYFRPEGVTWNEPQPCKVCDCDPDKH 434
Query: 112 ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC--VQLDDD 169
C E+G+C C G++C++CA GYY CK C C G V L +D
Sbjct: 435 TGACAEETGKCECLPRFVGEDCDQCASGYYD------APKCKPCECNVNGTIGDVCLPED 488
Query: 170 QVVCSECPRGYGG 182
C C G+GG
Sbjct: 489 GQ-CP-CKAGFGG 499
Score = 164 (62.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 52/178 (29%), Positives = 80/178 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD-DQVSNLGNRTR 62
+C C+ N G+ C+RC +Y + C++C C G D+VS G
Sbjct: 673 QCYCKGNFEGERCDRCKPNFYNFPI------CEECNCNPSGVTRDFQGCDKVSP-GELCS 725
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA---DICDAES 119
R K G R + T + L YHHE G S C CN NG + CD ++
Sbjct: 726 CR-KHVTG----RICDQCKPTFWDLQ-YHHED---GCRS-C-DCNVNGTISGLNTCDLKT 774
Query: 120 GRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
G+C+C+ N G C++CA G+Y N+ C+ C C + G ++ + D + +C
Sbjct: 775 GQCMCKKNADGRRCDQCADGFYRLNSYNQM--GCESCHC-DIGGALRAECD-ITSGQC 828
Score = 138 (53.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 29/94 (30%), Positives = 43/94 (45%)
Query: 90 YHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAV 149
+ ++P G C P G +CD ESG+C+C+++ GG C+RC G+YG
Sbjct: 1495 FGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRESMGGRQCDRCLAGFYG------F 1548
Query: 150 TDCKQCPCPNQGPCVQLDDDQVVCSECPRG-YGG 182
C C C G ++ D +C YGG
Sbjct: 1549 PHCYGCSCNRAGTTEEICDATNAQCKCKENVYGG 1582
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 42/170 (24%), Positives = 65/170 (38%)
Query: 16 CERCARGYYGNALEGAVTDCKQCPCPNQ--GPCVQLDDDQVSNLGNRTRIRIKSALGGNR 73
C+ C G + + + QCPC G + D +N+ + A G
Sbjct: 469 CKPCECNVNGTIGDVCLPEDGQCPCKAGFGGTFCETCADGYTNVTAGCVECVCDATGSEH 528
Query: 74 TRGLALTRQTHYQ--LTGYHHEPTSGGAFSR-CVPCNCN--G-HADICDAESGRCICQDN 127
A T Q + G + G F C CNC+ G +CD +G+C+C++
Sbjct: 529 GNCSASTGQCECKPAYAGLSCDKCQVGYFGDDCKFCNCDPMGTEGGVCDQTTGQCLCKEG 588
Query: 128 TGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
GD C+RC +YG +CK C C G + + +CP
Sbjct: 589 FAGDKCDRCDIAFYG------YPNCKACACDGAG--ITSPECDATSGQCP 630
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/89 (34%), Positives = 40/89 (44%)
Query: 100 FSRCVPCNCNGHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
+ C C C+G A I CDA SG+C C N G C++CA G+Y DC+ C
Sbjct: 604 YPNCKACACDG-AGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYN------YPDCRGC 656
Query: 156 PCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C G Q D C C + GE+
Sbjct: 657 ECLLSGAKGQTCDSNGQCY-CKGNFEGER 684
Score = 117 (46.2 bits), Expect = 0.00097, P = 0.00097
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 103 CVPCNCNG----HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
CV C C+ H + C A +G+C C+ G +C++C GY+G+ DCK C C
Sbjct: 516 CVECVCDATGSEHGN-CSASTGQCECKPAYAGLSCDKCQVGYFGD-------DCKFCNCD 567
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
G + D C G+ G+K
Sbjct: 568 PMGTEGGVCDQTTGQCLCKEGFAGDK 593
Score = 105 (42.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 29/95 (30%), Positives = 40/95 (42%)
Query: 93 EPTSGGAFSRCVPCN-CN-GHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+P G FS+C C C+ G A C+ E+G+C C+ G CE C GY+ G
Sbjct: 2022 KPDHWG-FSKCQGCQGCHCGTAAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHG 2080
Query: 148 AVTDCKQCPCP---NQGPCVQLDDDQVVCSECPRG 179
C +C C + G + Q C E G
Sbjct: 2081 ----CDKCDCEADLSMGTVCDVRTGQCHCQEGATG 2111
Score = 97 (39.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 27/81 (33%), Positives = 35/81 (43%)
Query: 106 CNC--NGHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C+C G C+ G+C C+ G CERCA GYY +C +C C N G
Sbjct: 1415 CDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYN------FPECIKCQC-NAGQ 1467
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
Q D+ C CP G+
Sbjct: 1468 --QCDERTGQCF-CPPHVEGQ 1485
Score = 89 (36.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 103 CVPCNCNGHAD---ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+C +CD +G+C CQ+ G C++C Y G C +C
Sbjct: 2081 CDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCDQCLPSYLRIPTYGC-RRCDEC 2135
Score = 88 (36.0 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 21/76 (27%), Positives = 31/76 (40%)
Query: 109 NGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
NG + A S +C C G +C+ CA GY+ + C C C G D
Sbjct: 1783 NGVDSVIKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPCEC--NGHSATCD 1840
Query: 168 DDQVVCSECPRGYGGE 183
D +C++C G+
Sbjct: 1841 PDTGICTDCEHNTNGD 1856
Score = 84 (34.6 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C+C++ GD C+RC +YG +CK C C G
Sbjct: 582 QCLCKEGFAGDKCDRCDIAFYG------YPNCKACACDGAG 616
Score = 82 (33.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 4 RCICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQCPC 40
+C C+ GD C+RCA G++G+ + G C C C
Sbjct: 1904 QCNCKPGYTGDRCDRCASGFFGHPQISGE--SCSPCQC 1939
Score = 73 (30.8 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C N G C++CA G+Y DC+ C C
Sbjct: 628 QCPCNGNFTGRTCDKCAAGFYN------YPDCRGCEC 658
Score = 49 (22.3 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 31 AVTDCKQCPCPNQGPCVQL 49
+V C QCP P GP QL
Sbjct: 1793 SVEQC-QCPAPYTGPSCQL 1810
Score = 48 (22.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 19/94 (20%), Positives = 38/94 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVSNLGNRTR 62
+C C+ G C++ +Y L + + +Q P +D +Q ++ R
Sbjct: 827 QCKCRPRVTGLRCDQPIENHYFPTLWHNQYEAEDAHTEDQKPVRFAVDPEQFADFSWRG- 885
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS 96
+ S + + +T+ T Y+L + PTS
Sbjct: 886 YAVFSPIQDKILIDVDITKATVYRLLFRYRNPTS 919
Score = 39 (18.8 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 103 CVPCNCNGHADIC 115
CV C C G D C
Sbjct: 1602 CVNCFCFGVTDSC 1614
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 247 (92.0 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 70/192 (36%), Positives = 88/192 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP------NQGPCVQLDDDQVSNLGNR 60
C NT GD CERC GYYGN L+G DCK+C CP N P QL +L +
Sbjct: 871 CMHNTFGDRCERCQLGYYGNPLQGTPNDCKRCACPLSEDSNNFSPSCQLKSYNYMDLNPQ 930
Query: 61 TRIRIKSA--LGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPCNCNGHADICD 116
+ I+ A + G H Q+ GY P G S C C+C G C+
Sbjct: 931 FEL-IEHAEYICTQCPEGYT---GDHCQVCDDGYFGNPRQPG--SSCQRCDCAGGP--CN 982
Query: 117 AESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL---DDDQVV 172
+G CI C+ NT G +CERC GY+G+ G C C C +G L D Q +
Sbjct: 983 VTTGECITCRGNTEGWHCERCKLGYWGDPAVG----CDPCHCHTEGSESGLCDSTDGQCL 1038
Query: 173 CSECPRGYGGEK 184
C PR Y G+K
Sbjct: 1039 CK--PR-YAGQK 1047
Score = 224 (83.9 bits), Expect = 6.3e-22, Sum P(3) = 6.3e-22
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 92 HEPTSGGAF-SRCVPCNCNGHADICDAESGRC-ICQDNTGGDNCERCARGYYGNALEGAV 149
+E TS S+C+PC CNGH++ CD +SG C C NT GD CERC GYYGN L+G
Sbjct: 837 YENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQGTP 896
Query: 150 TDCKQCPCP 158
DCK+C CP
Sbjct: 897 NDCKRCACP 905
Score = 182 (69.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 55/190 (28%), Positives = 79/190 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+CICQ NT G CE+C + + +C+ C C G D + G
Sbjct: 419 QCICQHNTCGAQCEQCCPLFQDRPYQMG-GECEICQC--YGHAESCTYDPFLDKGI---- 471
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--CDAESGR 121
+S N T G+ + + G++ E C+PC+CN C ++ G
Sbjct: 472 -CQSC--SNNTAGI----ECEFCEMGFYRE-LDAPLTDPCLPCSCNPARSTGGCQSDGGS 523
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP------C-----VQLDDDQ 170
C C + G NCE CA GYYG+ DCK+C C +G C +L+ +
Sbjct: 524 CNCLEGFQGKNCEECAPGYYGD-------DCKRCECDERGSLGSTGSCSGVCQCKLNVEG 576
Query: 171 VVCSECPRGY 180
CSEC GY
Sbjct: 577 STCSECAPGY 586
Score = 180 (68.4 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 36/86 (41%), Positives = 48/86 (55%)
Query: 102 RCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-- 158
R PC+CNG + CD E+G C C+ NTGGD+C +CA G+YG+ + C+ CPCP
Sbjct: 1666 RAAPCHCNGRSSDCDRETGVCQNCRGNTGGDHCHQCAEGFYGDP--NSPHGCQACPCPET 1723
Query: 159 --NQGPCVQLDDDQVVCSECPRGYGG 182
N + D +V C C GY G
Sbjct: 1724 NRNFARGCNVWDGEVSCV-CKPGYTG 1748
Score = 147 (56.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/209 (25%), Positives = 85/209 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYG-NALEGAVTDC---KQ-----------CPC---PNQGP 45
+C C++ G C C GY+G NA+ + D +Q P PN
Sbjct: 1084 QCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTEDPNSES 1143
Query: 46 CVQLDDDQVSNLGNRT-----RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF 100
V ++ S++G+ + R + L R R H+ LT G
Sbjct: 1144 TVACEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTA-----GEGCRD 1198
Query: 101 SRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPN 159
RC P GH C+ +G+C C+ GG +C C G++G + EG C++C C +
Sbjct: 1199 CRCDPHGSRGHE--CNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEG----CQRCSACRS 1252
Query: 160 QGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
+G + + +C + RG G + PG
Sbjct: 1253 EGQVCDPHNGRCICPKFTRGLGCGQCVPG 1281
Score = 133 (51.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 51/172 (29%), Positives = 69/172 (40%)
Query: 28 LEGAVTDCKQCPCPNQGP-CVQLDDDQVSNL---GNRTRIRIKSALGG--NRTRGLALTR 81
+E A C QCP G C DD N G+ + R A GG N T G +T
Sbjct: 934 IEHAEYICTQCPEGYTGDHCQVCDDGYFGNPRQPGSSCQ-RCDCA-GGPCNVTTGECITC 991
Query: 82 QTHYQLTGYHHEPTSGGAFSR----CVPCNCN---GHADICDAESGRCICQDNTGGDNCE 134
+ + + G+H E G + C PC+C+ + +CD+ G+C+C+ G C+
Sbjct: 992 RGNTE--GWHCERCKLGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCD 1049
Query: 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVVCSECPRGYGGEK 184
C GY L C C C G VQ D C C G G K
Sbjct: 1050 ECDVGYANVELR-----CPSCNCDPLGSLVQDRCDPHTGQC-HCKEGVMGAK 1095
Score = 131 (51.2 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 36/110 (32%), Positives = 47/110 (42%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY P G S C C+C G C+ +G CI C+ NT G +CERC GY+G+ G
Sbjct: 959 GYFGNPRQPG--SSCQRCDCAGGP--CNVTTGECITCRGNTEGWHCERCKLGYWGDPAVG 1014
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVV--------CSECPRGYGGEKM 185
C C C +G C D + C EC GY ++
Sbjct: 1015 ----CDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKCDECDVGYANVEL 1060
Score = 128 (50.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 37/104 (35%), Positives = 47/104 (45%)
Query: 89 GYH-HEPTSGG-AFSR--CVPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGN 143
G H +E T G FS C C+ C +CD +GRCIC T G C +C G +G
Sbjct: 1226 GQHCNECTEGFFGFSTEGCQRCSACRSEGQVCDPHNGRCICPKFTRGLGCGQCVPGTWGW 1285
Query: 144 ALEGAVTDCKQCPCPNQGPCVQ---LDDDQVVCSECPRGYGGEK 184
A C++C C + G Q D Q C +C GY G K
Sbjct: 1286 Q---ARLGCRECECDHIGSIGQQCSTGDGQ--C-QCREGYSGRK 1323
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 35/98 (35%), Positives = 44/98 (44%)
Query: 103 CVPCNCNGHADICD----AESGRC-ICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCP 156
C C C GHA+ C + G C C +NT G CE C G+Y L+ +TD C C
Sbjct: 449 CEICQCYGHAESCTYDPFLDKGICQSCSNNTAGIECEFCEMGFY-RELDAPLTDPCLPCS 507
Query: 157 C-PNQ---------GPCVQLDDDQVV-CSECPRGYGGE 183
C P + G C L+ Q C EC GY G+
Sbjct: 508 CNPARSTGGCQSDGGSCNCLEGFQGKNCEECAPGYYGD 545
Score = 115 (45.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/98 (30%), Positives = 42/98 (42%)
Query: 84 HYQLTGYHHEPTSGGAFSRCVPC---NCNGHADICDAESGR--CICQDNTGGDNCERCAR 138
H G++ +P S C PC N N A C+ G C+C+ G CERC
Sbjct: 1699 HQCAEGFYGDPNSPHGCQAC-PCPETNRN-FARGCNVWDGEVSCVCKPGYTGRLCERCQA 1756
Query: 139 GYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
GY+G+ + T C+ C C G +Q + V C
Sbjct: 1757 GYFGDPMRYPNTTCQPCNCHPDG--IQTEGCDVETGRC 1792
Score = 114 (45.2 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 24/81 (29%), Positives = 36/81 (44%)
Query: 103 CVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C C C+ I C G+C C++ G C+ CA GY+G +C++C C
Sbjct: 1291 CRECECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFG------YPECRRCGCDA 1344
Query: 160 QGPCVQLDDDQVVCS---ECP 177
+G Q D + C +CP
Sbjct: 1345 EGSFTQADGS-IACDSNGQCP 1364
Score = 110 (43.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ NTGGD+C +CA G+YG+ + C+ CPCP
Sbjct: 1689 CRGNTGGDHCHQCAEGFYGDP--NSPHGCQACPCP 1721
Score = 102 (41.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 102 RCVPCNCN--GHA--DICDAESGRCICQDNTGGDNCERCARGYYG-NALEGAVTD 151
RC CNC+ G D CD +G+C C++ G C C GY+G NA+ + D
Sbjct: 1061 RCPSCNCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDD 1115
Score = 100 (40.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 89 GYHHEPTSGGAFSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNAL 145
GY +P + C PCNC+ G + CD E+GRC C++ G C++C + + +
Sbjct: 1757 GYFGDPMRYPN-TTCQPCNCHPDGIQTEGCDVETGRCYCREGVTGLKCDKCQAERH-HLV 1814
Query: 146 EGAVTDCKQC 155
+ C C
Sbjct: 1815 DNGCKICDNC 1824
Score = 84 (34.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 50
+C C++ G C+ CA GY+G +C++C C +G Q D
Sbjct: 1312 QCQCREGYSGRKCDTCAIGYFG------YPECRRCGCDAEGSFTQAD 1352
Score = 74 (31.1 bits), Expect = 6.3e-22, Sum P(3) = 6.3e-22
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ N G C CA GY+ + E A C C C
Sbjct: 568 CQCKLNVEGSTCSECAPGYFDLSAENA-EGCTSCWC 602
Score = 66 (28.3 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
+C+C+ G C+ C GY L C C C G VQ
Sbjct: 1036 QCLCKPRYAGQKCDECDVGYANVELR-----CPSCNCDPLGSLVQ 1075
Score = 59 (25.8 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLD 50
+C C+ G C+ C + +G + + C +C C G C Q D
Sbjct: 1362 QCPCKSLVVGLKCDTCMQSTFGLSAQNP-EGCTRCFCFGRSGECEQSD 1408
Score = 36 (17.7 bits), Expect = 6.3e-22, Sum P(3) = 6.3e-22
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEP 94
+K A G GL + G++H P
Sbjct: 710 LKIAFGDESLDGLGINLNVTLTEVGWYHVP 739
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 238 (88.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 57/160 (35%), Positives = 84/160 (52%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQD T G NCERC GYYG+ + G+ C+ CPCP+ GP Q ++ + +
Sbjct: 895 CLSCQDYTTGHNCERCLAGYYGDPVIGSGDHCRPCPCPD-GP---ESGRQFASSCYQDPV 950
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-----CDAE 118
++ A N G +R +G+ P+ G C PC C+ + D CD E
Sbjct: 951 SLQLACVCNP--GYIGSRCDECA-SGFFGNPSDVGG--TCQPCQCHHNIDTADPEACDKE 1005
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+GRC+ C +T G++C+ C GYYG+AL DC++C C
Sbjct: 1006 TGRCLKCLYHTEGEHCQLCRFGYYGDALR---QDCRKCVC 1042
Score = 217 (81.4 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 36/64 (56%), Positives = 44/64 (68%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHAD CD+ +G C+ CQD T G NCERC GYYG+ + G+ C+ CPCP
Sbjct: 873 FPSCQPCQCNGHADDCDSVTGECLSCQDYTTGHNCERCLAGYYGDPVIGSGDHCRPCPCP 932
Query: 159 NQGP 162
+ GP
Sbjct: 933 D-GP 935
Score = 159 (61.0 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 57/195 (29%), Positives = 78/195 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C G C+ CA G++GN + T C+ C C + + D + +
Sbjct: 956 CVCNPGYIGSRCDECASGFFGNPSDVGGT-CQPCQCHHN---IDTADPEACD-------- 1003
Query: 65 IKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPCN--------CNGHADI 114
K G + L T H QL GY+ + +CV CN CNG
Sbjct: 1004 -KET--GRCLKCLYHTEGEHCQLCRFGYYGDALRQDC-RKCV-CNYLGTVQEHCNGSDCQ 1058
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQGPCVQLDDDQV 171
CD +G+C+C N G NC+RCA + A G T C C C + GP Q
Sbjct: 1059 CDKTTGQCLCLPNVIGQNCDRCAPNTWQLA-SG--TGCDPCSCDAAHSFGPSCNEFTGQ- 1114
Query: 172 VCSECPRGYGGEKMS 186
C C G+GG S
Sbjct: 1115 -C-HCMPGFGGRTCS 1127
Score = 147 (56.8 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 44/159 (27%), Positives = 68/159 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P----NQGPCVQLDDDQVSNLG 58
CQ NT G NCE+C YY + E + D C+QC C P N G C D +
Sbjct: 377 CQHNTMGRNCEQCKPFYYQHP-ERDIRDPSLCEQCTCDPAGSQNGGICDSYTDFSAGLIA 435
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ R ++ + G + ++ Y L+ E G C P + CD+E
Sbjct: 436 GQCRCKLY--VEGEHCD---ICKEGFYGLSA---EDPFGCKSCACNPLGTIPGGNPCDSE 487
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+G C C+ G +C++C ++G L + C+ C C
Sbjct: 488 TGYCYCKRLVTGQHCDQCLPEHWG--LSNDLDGCRPCDC 524
Score = 142 (55.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 54/201 (26%), Positives = 77/201 (38%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE+C Y+ EG ++ CK+C C D GN
Sbjct: 310 CMCRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNV 369
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADICD 116
+ R + +YQ H E S C C C+ G + ICD
Sbjct: 370 SGGVCDDCQHNTMGRNCEQCKPFYYQ----HPERDIRDP-SLCEQCTCDPAGSQNGGICD 424
Query: 117 AES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGP 162
+ + G+C C+ G++C+ C G+YG + E CK C C P P
Sbjct: 425 SYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPF-GCKSCACNPLGTIPGGNP 483
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C D + C C R G+
Sbjct: 484 C---DSETGYCY-CKRLVTGQ 500
Score = 117 (46.2 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 103 CVPCNCN-GHA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C PC+C+ G A + C AESG+C+C+ + G C GYY L+ + + ++ N
Sbjct: 519 CRPCDCDIGGALNNSCSAESGQCLCRPHMIGRQCSEVESGYYFTTLDHYIYEAEEA---N 575
Query: 160 QGPCVQLDDDQVVCSECPR--GYGGEKMSPGA 189
GP V + + Q + P G G ++ GA
Sbjct: 576 FGPGVSIVERQYIQDRIPSWTGAGFVRVPEGA 607
Score = 115 (45.5 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 103 CVPCNCNG-HA--DICDAESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----Q 154
C PC+C+ H+ C+ +G+C C GG C C ++G+ ++E DC +
Sbjct: 1093 CDPCSCDAAHSFGPSCNEFTGQCHCMPGFGGRTCSECQELFWGDPSVECRACDCDPRGIE 1152
Query: 155 CP-CPNQ-GPCVQLDD-DQVVCSECPRGYGG 182
P C G CV ++ + C +C RGY G
Sbjct: 1153 TPQCDQSTGQCVCVEGVEGPRCDKCTRGYSG 1183
Score = 112 (44.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 106 CNCNGH---ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
C C+ + +CD G+C C+ N G C+RCA G +G G CK C C QG
Sbjct: 785 CECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPGTFGFGPSG----CKPCECHLQG 839
Score = 105 (42.0 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 103 CVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+C+ G CD +G+C+C + G C++C RGY G + T C QC
Sbjct: 1141 CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD--CTPCHQC 1194
Score = 103 (41.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 25/98 (25%), Positives = 39/98 (39%)
Query: 95 TSGGAFSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
T G S C PC C+ + CD +G+C C C+RC G++G
Sbjct: 822 TFGFGPSGCKPCECHLQGSVSAFCDPITGQCHCFQGVYTRQCDRCLPGFWG------FPS 875
Query: 152 CKQCPCPNQGP-CVQLDDDQVVCSECPRGYGGEKMSPG 188
C+ C C C + + + C + G+ E+ G
Sbjct: 876 CQPCQCNGHADDCDSVTGECLSCQDYTTGHNCERCLAG 913
Score = 84 (34.6 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C+RCA G +G G CK C C QG
Sbjct: 803 QCQCRPNVVGRRCDRCAPGTFGFGPSG----CKPCECHLQG 839
Score = 78 (32.5 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGPC 46
+C C+ G++C+ C G+YG + E CK C C P PC
Sbjct: 437 QCRCKLYVEGEHCDICKEGFYGLSAEDPF-GCKSCACNPLGTIPGGNPC 484
Score = 72 (30.4 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C+C N G NC+RCA + A G T C C C
Sbjct: 1065 QCLCLPNVIGQNCDRCAPNTWQLA-SG--TGCDPCSC 1098
Score = 61 (26.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G +C++C ++G L + C+ C C
Sbjct: 491 CYCKRLVTGQHCDQCLPEHWG--LSNDLDGCRPCDC 524
Score = 60 (26.2 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 53
+C+C+ + G C GYY L+ + + ++ N GP V + + Q
Sbjct: 540 QCLCRPHMIGRQCSEVESGYYFTTLDHYIYEAEEA---NFGPGVSIVERQ 586
Score = 38 (18.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCK 36
++C C +++ + + GN G DC+
Sbjct: 345 KKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQ 378
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 238 (88.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 57/157 (36%), Positives = 82/157 (52%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQD T G NCERC GYYG+A+ G+ C+ CPCP+ GP Q ++ + + ++
Sbjct: 899 CQDYTTGHNCERCLAGYYGDAIIGSGDHCRPCPCPD-GP---ESGRQFASSCYQDPVTLQ 954
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGR 121
A N G +R G+ P+ G C PC C+ + D CD E+GR
Sbjct: 955 LACVCNP--GYIGSRCEDCA-AGFFGNPSEVGG--TCQPCQCHHNIDTTDPEACDKETGR 1009
Query: 122 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C+ C +T G +C+ C GYYG+AL+ DC++C C
Sbjct: 1010 CLKCLYHTEGVHCQLCRLGYYGDALQ---QDCRKCVC 1043
Score = 215 (80.7 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 36/64 (56%), Positives = 44/64 (68%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHA+ CD+ +G C CQD T G NCERC GYYG+A+ G+ C+ CPCP
Sbjct: 874 FPSCQPCQCNGHAEDCDSVTGECSSCQDYTTGHNCERCLAGYYGDAIIGSGDHCRPCPCP 933
Query: 159 NQGP 162
+ GP
Sbjct: 934 D-GP 936
Score = 171 (65.3 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 56/193 (29%), Positives = 87/193 (45%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
RC+ C +T G +C+ C GYYG+AL+ DC++C C G + + T
Sbjct: 1009 RCLKCLYHTEGVHCQLCRLGYYGDALQ---QDCRKCVCNYLGTVQEHCNGSDCQCDKTTG 1065
Query: 63 --IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HA--DICDA 117
+ + + +G N R T +QL SG + C PCNC+ H+ C+
Sbjct: 1066 QCLCLPNVIGQNCDRCAPNT----WQLA-------SG---TGCEPCNCDAAHSFGPSCNE 1111
Query: 118 ESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----QCP-CPNQ-GPCVQLDD-D 169
+G+C C GG C C ++G+ ++E DC + P C G CV ++ +
Sbjct: 1112 FTGQCQCMPGFGGRTCSECQELFWGDPSVECRACDCDPRGIETPQCDQSTGQCVCVEGVE 1171
Query: 170 QVVCSECPRGYGG 182
C +C RGY G
Sbjct: 1172 GPRCDKCTRGYSG 1184
Score = 169 (64.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 59/195 (30%), Positives = 80/195 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C G CE CA G++GN E T C+ C C + + D + +
Sbjct: 957 CVCNPGYIGSRCEDCAAGFFGNPSEVGGT-CQPCQCHHN---IDTTDPEACD-------- 1004
Query: 65 IKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPCN--------CNGHADI 114
K G + L T H QL GY+ + +CV CN CNG
Sbjct: 1005 -KET--GRCLKCLYHTEGVHCQLCRLGYYGDALQQDC-RKCV-CNYLGTVQEHCNGSDCQ 1059
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQGPCVQLDDDQV 171
CD +G+C+C N G NC+RCA + A G T C+ C C + GP Q
Sbjct: 1060 CDKTTGQCLCLPNVIGQNCDRCAPNTWQLA-SG--TGCEPCNCDAAHSFGPSCNEFTGQ- 1115
Query: 172 VCSECPRGYGGEKMS 186
C +C G+GG S
Sbjct: 1116 -C-QCMPGFGGRTCS 1128
Score = 149 (57.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 46/159 (28%), Positives = 67/159 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P----NQGPCVQLDDDQVSNLG 58
CQ NT G NCERC YY + E V D C+ C C P N G C D +
Sbjct: 378 CQHNTMGRNCERCKPFYYQHP-ERDVRDPNLCEPCTCDPAGSQNGGICDGYTDFSAGLIA 436
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ R ++ + G + ++ Y LT E G C P + CD+E
Sbjct: 437 GQCRCKLH--VEGEHCD---ICKEGFYGLTA---EDPFGCKSCACNPLGTIPGGNPCDSE 488
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+G C C+ G +C++C ++G L + C+ C C
Sbjct: 489 TGYCYCKRLVTGQHCDQCLPEHWG--LSNDLDGCRPCDC 525
Score = 145 (56.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 54/201 (26%), Positives = 76/201 (37%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE C Y+ EG ++ CK+C C D GN
Sbjct: 311 CMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNV 370
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADICD 116
+ R + +YQ H E + C PC C+ G + ICD
Sbjct: 371 SGGVCDDCQHNTMGRNCERCKPFYYQ----HPERDVRDP-NLCEPCTCDPAGSQNGGICD 425
Query: 117 AES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGP 162
+ G+C C+ + G++C+ C G+YG E CK C C P P
Sbjct: 426 GYTDFSAGLIAGQCRCKLHVEGEHCDICKEGFYGLTAEDPF-GCKSCACNPLGTIPGGNP 484
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C D + C C R G+
Sbjct: 485 C---DSETGYCY-CKRLVTGQ 501
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 103 CVPCNCN-GHA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C PC+C+ G A + C AESG+C+C+ + G C G+Y L+ + + ++ N
Sbjct: 520 CRPCDCDLGGALNNSCSAESGQCLCRPHMIGRQCNEVESGFYFTTLDHYIYEAEEA---N 576
Query: 160 QGPCVQLDDDQVVCSECPR--GYGGEKMSPGA 189
GP V + + Q V P G G ++ GA
Sbjct: 577 FGPGVSIVERQYVQDRIPSWTGAGFVRVPEGA 608
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 106 CNCNGH---ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
C C+ + +CD G+C C+ N G C+RCA G +G G CK C C QG
Sbjct: 786 CECDPQGSLSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFGFGPNG----CKPCECHLQG 840
Score = 105 (42.0 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 103 CVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+C+ G CD +G+C+C + G C++C RGY G + T C QC
Sbjct: 1142 CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD--CTPCHQC 1195
Score = 104 (41.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 25/85 (29%), Positives = 33/85 (38%)
Query: 95 TSGGAFSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
T G + C PC C+ + CD +G+C C C+RC GY+G
Sbjct: 823 TFGFGPNGCKPCECHLQGSVNAFCDPVTGQCHCFQGVYARQCDRCLPGYWG------FPS 876
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSEC 176
C+ C C G D CS C
Sbjct: 877 CQPCQC--NGHAEDCDSVTGECSSC 899
Score = 84 (34.6 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C+RCA G +G G CK C C QG
Sbjct: 804 QCQCRPNVVGRKCDRCAPGTFGFGPNG----CKPCECHLQG 840
Score = 80 (33.2 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGPC 46
+C C+ + G++C+ C G+YG E CK C C P PC
Sbjct: 438 QCRCKLHVEGEHCDICKEGFYGLTAEDPF-GCKSCACNPLGTIPGGNPC 485
Score = 61 (26.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G +C++C ++G L + C+ C C
Sbjct: 492 CYCKRLVTGQHCDQCLPEHWG--LSNDLDGCRPCDC 525
Score = 56 (24.8 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 53
+C+C+ + G C G+Y L+ + + ++ N GP V + + Q
Sbjct: 541 QCLCRPHMIGRQCNEVESGFYFTTLDHYIYEAEEA---NFGPGVSIVERQ 587
Score = 38 (18.4 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCK 36
++C C +++ + + GN G DC+
Sbjct: 346 KKCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQ 379
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 217 (81.4 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 44/96 (45%), Positives = 55/96 (57%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC+CNGHAD C +G C+ C+D+T G NCERC GYYG+ + G+ C+ CPCP
Sbjct: 853 FPSCQPCHCNGHADDCSPYTGECLHCRDHTAGPNCERCEAGYYGDPILGSGDHCRPCPCP 912
Query: 159 NQGP---------CVQLDDD-QVVCSECPRGYGGEK 184
+ GP C Q QVVC C GY G +
Sbjct: 913 D-GPESGRQFASGCYQDPVTLQVVCV-CSTGYIGSR 946
Score = 188 (71.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 58/190 (30%), Positives = 86/190 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C +T G+NC C +GYYG+AL+ DC++C C G V+ D D N
Sbjct: 989 CVKCLYHTEGENCHLCRQGYYGSALQ---QDCRKCVCNYLGT-VREDCDDAENC------ 1038
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
R ++A G R + QT + SG + C PC+C+ I C+ +G
Sbjct: 1039 RCEAATGQCRCLP-GVVGQTCDRCAPNTWRLASG---TGCEPCDCDTARSIGLACNEFTG 1094
Query: 121 RCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----QCP-CPNQ-GPCVQLDD-DQVV 172
+C C GG C C ++G+ ++E DC Q P C G C+ + +
Sbjct: 1095 QCHCMPGFGGRTCRECQELFWGDPSVECRACDCNPRGIQTPQCDRATGQCICNEGVEGPR 1154
Query: 173 CSECPRGYGG 182
C +C RGY G
Sbjct: 1155 CDKCSRGYSG 1164
Score = 164 (62.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 39/108 (36%), Positives = 53/108 (49%)
Query: 88 TGYHHEPTS-GGAFSRCVPCNCNGHAD-----ICDAESGRCI-CQDNTGGDNCERCARGY 140
+G+ P GGA C PC CN + D CD +G C+ C +T G+NC C +GY
Sbjct: 952 SGFFGSPDEVGGA---CQPCQCNNNIDSTDPEACDKRTGTCVKCLYHTEGENCHLCRQGY 1008
Query: 141 YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
YG+AL+ DC++C C G + DD C C G + PG
Sbjct: 1009 YGSALQ---QDCRKCVCNYLGTVREDCDDAENC-RCEAATGQCRCLPG 1052
Score = 158 (60.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 54/195 (27%), Positives = 86/195 (44%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P----NQGPCVQLDDDQVSNLG 58
CQ NT G NCE+C Y+ + E + D C+ C C P N G C + D +
Sbjct: 356 CQHNTVGRNCEQCKPFYFQHP-ERDLRDPDVCEPCNCDPAGSQNGGVCDRYTDFSTGLIA 414
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ R ++ + G R L ++ Y L+ +P SG C P + + CD+E
Sbjct: 415 GQCRCKL--FVEGERCD---LCKEGFYGLSA--DDP-SGCQSCACNPLGTHPGGNPCDSE 466
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ--LDDDQVVCSEC 176
+G C C+ G C +C ++G L + C+ C C +QG + + C EC
Sbjct: 467 TGNCYCKRLVTGKQCNQCLPEHWG--LSNDMDGCRPCDC-DQGGALHNNCSSESGQC-EC 522
Query: 177 -PRGYGGE--KMSPG 188
P +G + ++ PG
Sbjct: 523 RPHMFGRQCNQVEPG 537
Score = 135 (52.6 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ C+D+T G NCERC GYYG+ + G+ C+ CPCP+ GP
Sbjct: 875 CLHCRDHTAGPNCERCEAGYYGDPILGSGDHCRPCPCPD-GP 915
Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/181 (25%), Positives = 70/181 (38%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE+C Y+ EG ++ CK+C C D GN
Sbjct: 289 CMCRHNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSTQCHFDMAVYMATGNT 348
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADICD 116
+ R + ++Q H E C PCNC+ G + +CD
Sbjct: 349 SGGVCDDCQHNTVGRNCEQCKPFYFQ----HPERDLRDP-DVCEPCNCDPAGSQNGGVCD 403
Query: 117 AES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGP 162
+ G+C C+ G+ C+ C G+YG + + + C+ C C P P
Sbjct: 404 RYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLSADDP-SGCQSCACNPLGTHPGGNP 462
Query: 163 C 163
C
Sbjct: 463 C 463
Score = 131 (51.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 50/190 (26%), Positives = 73/190 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+C G C+ CA G++G+ E G C+ C C N +D RT
Sbjct: 936 CVCSTGYIGSRCDECASGFFGSPDEVGGA--CQPCQCNNN-----IDSTDPEACDKRTGT 988
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCN--------CNGHADI- 114
+K T G H GY+ +CV CN C+ +
Sbjct: 989 CVKCLY---HTEG----ENCHLCRQGYYGSALQQDC-RKCV-CNYLGTVREDCDDAENCR 1039
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV-- 172
C+A +G+C C G C+RCA + A G T C+ C C + + L ++
Sbjct: 1040 CEAATGQCRCLPGVVGQTCDRCAPNTWRLA-SG--TGCEPCDC-DTARSIGLACNEFTGQ 1095
Query: 173 CSECPRGYGG 182
C C G+GG
Sbjct: 1096 C-HCMPGFGG 1104
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G+ C+ C G+YG + + + C+ C C G ++ G
Sbjct: 416 QCRCKLFVEGERCDLCKEGFYGLSADDP-SGCQSCACNPLG----------THPGGNP-- 462
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN-GHA--DICDAESG 120
S G + L +Q + L H S C PC+C+ G A + C +ESG
Sbjct: 463 -CDSETGNCYCKRLVTGKQCNQCLP--EHWGLSND-MDGCRPCDCDQGGALHNNCSSESG 518
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR-- 178
+C C+ + G C + GYY +L+ + + ++ N GP V + + Q P
Sbjct: 519 QCECRPHMFGRQCNQVEPGYYFISLDHYIYEAEEA---NLGPGVNIIERQSTQDRTPSWT 575
Query: 179 GYGGEKMSPGA 189
G G ++ GA
Sbjct: 576 GIGFVRVPEGA 586
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 32/102 (31%), Positives = 42/102 (41%)
Query: 95 TSGGAFSRCVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
T G S C PC C+ + CDAE+G+C C G C+RC G++G
Sbjct: 802 TFGFGPSGCRPCECHLRGSYNSFCDAETGQCHCFPGVYGRQCDRCLPGFWG------FPS 855
Query: 152 CKQCPC--------PNQGPCVQLDDDQVV--CSECPRGYGGE 183
C+ C C P G C+ D C C GY G+
Sbjct: 856 CQPCHCNGHADDCSPYTGECLHCRDHTAGPNCERCEAGYYGD 897
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 89 GYHHEPTSGGAFSRCVPCNC-----NGH--ADIC--DAESGRCICQDNTG--GDNCERCA 137
GY+ +P G C PC C +G A C D + + +C +TG G C+ CA
Sbjct: 893 GYYGDPILGSG-DHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSTGYIGSRCDECA 951
Query: 138 RGYYGNALE--GAVTDCKQCPCPN 159
G++G+ E GA C+ C C N
Sbjct: 952 SGFFGSPDEVGGA---CQPCQCNN 972
Score = 75 (31.5 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C RCA G +G G C+ C C +G
Sbjct: 783 QCQCRPNVVGRQCNRCAPGTFGFGPSG----CRPCECHLRG 819
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 229 (85.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 48/108 (44%), Positives = 61/108 (56%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + G RCVPCNCNGH++ C SG CI CQ NT G++CERC G+Y N + G
Sbjct: 1674 GYYRD-NRGSYTGRCVPCNCNGHSNRCQDGSGICINCQHNTAGEHCERCKEGHYRNTIHG 1732
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C CPCP+ CV + V CS C GY G E+ +PG
Sbjct: 1733 S---CSVCPCPHSNSFATGCV-VTGGNVRCS-CKPGYTGTQCERCAPG 1775
Score = 191 (72.3 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 51/151 (33%), Positives = 67/151 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGPCVQLDDDQVSNLGN 59
+C CQ +T G C+RC GY A +C+ C C D D V
Sbjct: 318 QCECQHHTCGKTCDRCCAGYNQRRWRPATWEQSNECEACNCHGHAIDCYYDPD-VERQQA 376
Query: 60 RTRIRIKSALGG------NRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCNG- 110
I A GG + T G+ + +Y+ G + G C+PC+CN
Sbjct: 377 SLNIHGIYAGGGVCINCQHNTAGINCENCAKGYYRPYGVPVDAPHG-----CIPCSCNPE 431
Query: 111 HADICDAESGRCICQDNTGGDNCERCARGYY 141
HAD C+ SGRC C+ N GDNCE+CA GYY
Sbjct: 432 HADDCEPGSGRCTCKPNFQGDNCEKCAVGYY 462
Score = 166 (63.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 46/137 (33%), Positives = 59/137 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT G++CERC G+Y N + G+ C CPCP+ V GN R
Sbjct: 1706 CINCQHNTAGEHCERCKEGHYRNTIHGS---CSVCPCPHSN---SFATGCVVTGGN-VRC 1758
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K G + A GY P GG+ C CN NGH C +G C
Sbjct: 1759 SCKPGYTGTQCERCA---------PGYFGNPQKFGGSCQPC-NCNSNGHLSSCHPLTGDC 1808
Query: 123 ICQ---DNTGGDNCERC 136
I Q D++ + C+ C
Sbjct: 1809 INQEPKDDSPAEECDDC 1825
Score = 156 (60.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 52/170 (30%), Positives = 68/170 (40%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPC-PNQGPCVQLDDDQVSNLGN 59
CI CQ NT G NCE CA+GYY G ++ A C C C P + + + N
Sbjct: 390 CINCQHNTAGINCENCAKGYYRPYGVPVD-APHGCIPCSCNPEHADDCEPGSGRCTCKPN 448
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA-DICDAE 118
+ G L T +P +G C CN G +ICDA
Sbjct: 449 FQGDNCEKCAVGYYNFPFCLRIPIFPVSTPSPEDPVAGD-IKGC-DCNWEGVLPEICDAY 506
Query: 119 SGRCICQDNTGGDNCERCARGYYG----NALEGAVTDCKQCPC-PNQGPC 163
GRC+C+ G C+ C G+Y A + +V Q PC P G C
Sbjct: 507 -GRCLCRPGVEGPRCDACRVGFYSFPICQACQCSVLGSYQTPCNPVTGQC 555
Score = 149 (57.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/161 (30%), Positives = 69/161 (42%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C C + GD+C+ C+ GYY + G+ T C C C G + D G+ I
Sbjct: 1657 CACPPDYTGDSCQGCSPGYYRDN-RGSYTGRCVPCNC--NGHSNRCQD------GSGICI 1707
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC-NCNGHADICDAESG-- 120
+ G ++ HY+ T H G+ S C PC + N A C G
Sbjct: 1708 NCQHNTAGEHCERC---KEGHYRNT-IH------GSCSVC-PCPHSNSFATGCVVTGGNV 1756
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
RC C+ G CERCA GY+GN + + C+ C C + G
Sbjct: 1757 RCSCKPGYTGTQCERCAPGYFGNPQKFGGS-CQPCNCNSNG 1796
Score = 113 (44.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 86 QLTGYHHEPTSGGA--FSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGY 140
++TG + + G F C+PC+CN G + +CD +G C+C++N G C C G
Sbjct: 1386 RITGRQCDRCASGFYHFPECIPCHCNKDGTESGVCDPGTGVCLCKENVEGTECNVCREGS 1445
Query: 141 YGNALEGA-VTDCKQCPC 157
+ L+ A C C C
Sbjct: 1446 F--YLDPANPKGCTSCFC 1461
Score = 106 (42.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/77 (35%), Positives = 34/77 (44%)
Query: 104 VPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
+PC C+ I C E G+C C+ + G C RC GYYG CK C C
Sbjct: 1267 LPCECHPTGAIGRPCSPEGGQCPCRPSVIGRQCTRCRMGYYG------FPHCKPCNC--- 1317
Query: 161 GPCVQLDDDQVVCSECP 177
GP +L D+ CP
Sbjct: 1318 GP--RLCDEMTGKCLCP 1332
Score = 106 (42.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/89 (29%), Positives = 37/89 (41%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERC-ARGYYGNALEGAVTDCKQCPCP 158
F C PCNC +CD +G+C+C +T CE C + + L G C+ C C
Sbjct: 1309 FPHCKPCNCGPR--LCDEMTGKCLCPPHTVRPQCEVCDTHSFSFHPLAG----CEGCNCS 1362
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEKMSP 187
+G EC R +G + P
Sbjct: 1363 RRGTV------GAATRECDRDHGQCRCKP 1385
Score = 97 (39.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/65 (30%), Positives = 28/65 (43%)
Query: 103 CVPCNCNGHADI------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+ + CD + G+C C+ G C+RCA G+Y +C C
Sbjct: 1356 CEGCNCSRRGTVGAATRECDRDHGQCRCKPRITGRQCDRCASGFYH------FPECIPCH 1409
Query: 157 CPNQG 161
C G
Sbjct: 1410 CNKDG 1414
Score = 93 (37.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 34/120 (28%), Positives = 45/120 (37%)
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCIC 124
+ S L R RGL T L+G E S R H + E C C
Sbjct: 1612 VLSRLEDLRLRGLYFTETQRLSLSGVGLEEASDTGSGR------RAH----NVEM--CAC 1659
Query: 125 QDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
+ GD+C+ C+ GYY + G+ T C C C G + D +C C GE
Sbjct: 1660 PPDYTGDSCQGCSPGYYRDN-RGSYTGRCVPCNC--NGHSNRCQDGSGICINCQHNTAGE 1716
Score = 75 (31.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 2 FRRCICQDNTGGDNCERCARGYYG----NALEGAVTDCKQCPC-PNQGPC 46
+ RC+C+ G C+ C G+Y A + +V Q PC P G C
Sbjct: 506 YGRCLCRPGVEGPRCDACRVGFYSFPICQACQCSVLGSYQTPCNPVTGQC 555
Score = 71 (30.1 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C C+ + GD+C+ C GY+ AL+ + C+ C C
Sbjct: 652 CHCKSHVSGDSCDTCEDGYF--ALKKSNYFGCQGCQC 686
Score = 70 (29.7 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ + G C RC GYYG CK C C
Sbjct: 1287 QCPCRPSVIGRQCTRCRMGYYG------FPHCKPCNC 1317
Score = 65 (27.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C+RCA G+Y +C C C G
Sbjct: 1380 QCRCKPRITGRQCDRCASGFYH------FPECIPCHCNKDG 1414
Score = 57 (25.1 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C CQ G C+RC G Y
Sbjct: 554 QCECQPGITGQRCDRCLSGAY 574
Score = 57 (25.1 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C+C++N G C C G + L+ A C C C
Sbjct: 1427 CLCKENVEGTECNVCREGSF--YLDPANPKGCTSCFC 1461
Score = 54 (24.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 1 MFRRCICQDNTGGDNCERC-ARGYYGNALEGAVTDCKQCPCPNQG 44
M +C+C +T CE C + + L G C+ C C +G
Sbjct: 1325 MTGKCLCPPHTVRPQCEVCDTHSFSFHPLAG----CEGCNCSRRG 1365
Score = 45 (20.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 5 CICQDNTGGDNCERCARGYY 24
C C+++ G C+R YY
Sbjct: 703 CHCREHVVGKACQRPENNYY 722
Score = 43 (20.2 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 12/28 (42%), Positives = 12/28 (42%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPC 40
G NC R RG G A D QC C
Sbjct: 1358 GCNCSR--RGTVGAATRECDRDHGQCRC 1383
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 217 (81.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 48/109 (44%), Positives = 67/109 (61%)
Query: 89 GYHHEPTSGGAFS-RCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALE 146
G++ E S G FS RCVPCNCNG+++ C +G+CI CQ NT G+ CE C GY+G+A +
Sbjct: 1684 GFYRE--SKGLFSGRCVPCNCNGNSNRCHDGTGKCINCQYNTAGEKCELCKDGYFGDATQ 1741
Query: 147 GAVTDCKQCPCP--NQGP--CVQLDDDQVVCSECPRGYGG---EKMSPG 188
G+ C+ CPCP N+ CV + ++ C C GY G E+ +PG
Sbjct: 1742 GS---CRICPCPYTNRFATGCVA-NGGEIQCL-CKEGYTGVRCERCAPG 1785
Score = 168 (64.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/185 (29%), Positives = 74/185 (40%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C CQ NT G+ C+RC GY + A G + C+ C C D D V
Sbjct: 318 CECQHNTCGETCDRCCPGYNQKQWQPATAGNINICEPCNCHGHATDCYYDAD-VDQRRES 376
Query: 61 TRIRIKSALGG------NRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCN-GH 111
I GG + T G+ + + +Y+ G G C+ C C+
Sbjct: 377 LNIHGHYEGGGVCINCQHNTAGVNCEKCAKGYYRPYGVPARAPDG-----CISCPCDLER 431
Query: 112 ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
A+ C+ SGRC C+ N G+NCE CA G+Y D P + P + D
Sbjct: 432 AEGCEEGSGRCFCKWNFQGENCEHCADGFYSFPF-CIRKDIPVYPFTSPNPRDAIAGDIT 490
Query: 172 VCSEC 176
VC EC
Sbjct: 491 VC-EC 494
Score = 151 (58.2 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 42/137 (30%), Positives = 59/137 (43%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+CI CQ NT G+ CE C GY+G+A +G+ C+ CPCP + V+N G +
Sbjct: 1715 KCINCQYNTAGEKCELCKDGYFGDATQGS---CRICPCPYTN---RFATGCVAN-GGEIQ 1767
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC 122
K G R A GY P G + + CN NG CD +G C
Sbjct: 1768 CLCKEGYTGVRCERCA---------PGYFGNPQKYGGYCQKCNCNNNGQLASCDRLTGEC 1818
Query: 123 IC---QDNTGGDNCERC 136
+D ++C+ C
Sbjct: 1819 FNNEPKDVDPNEDCDSC 1835
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/181 (26%), Positives = 72/181 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD----QVSNLGN 59
RC C+ N G+NCE CA G+Y D P + P + D + +++G
Sbjct: 441 RCFCKWNFQGENCEHCADGFYSFPF-CIRKDIPVYPFTSPNPRDAIAGDITVCECNSVG- 498
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
T+ + LG R + Q G+H P +C P H+ IC+ +
Sbjct: 499 -TQPEVCDFLGRCLCRSGVVGLQCDSCQPGHHSFPVCEAC--QCSPLGSR-HS-ICEPTT 553
Query: 120 GRCICQDNTGGDNCERCARGYYGNAL-EGAVTDCKQCPC--PNQGPCVQLDD-DQVVCSE 175
G+C CQ N G C+RC EG ++C + G C L + CS+
Sbjct: 554 GQCECQTNVTGRQCDRCISAAPNFPYCEGINSECNPSGSVDSHSGYCQCLQHVEGPTCSK 613
Query: 176 C 176
C
Sbjct: 614 C 614
Score = 129 (50.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 31/83 (37%), Positives = 40/83 (48%)
Query: 89 GYHHEPTSGGAFSRCVPCN-CNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNAL 145
GY + T G R PC N A C A G +C+C++ G CERCA GY+GN
Sbjct: 1734 GYFGDATQGSC--RICPCPYTNRFATGCVANGGEIQCLCKEGYTGVRCERCAPGYFGNPQ 1791
Query: 146 E-GAVTDCKQCPCPNQGPCVQLD 167
+ G C++C C N G D
Sbjct: 1792 KYGGY--CQKCNCNNNGQLASCD 1812
Score = 128 (50.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 37/120 (30%), Positives = 55/120 (45%)
Query: 63 IRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+R + LG R +TR+ +Y + + + GG RCV C+GHA++C+A+S
Sbjct: 260 LRTNTLLGHLISKAQRDPTVTRRYYYSIK----DISIGG---RCV---CHGHAEVCNAKS 309
Query: 120 GR------CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
C CQ NT G+ C+RC GY + A G + C+ C C D D
Sbjct: 310 AENQYQFHCECQHNTCGETCDRCCPGYNQKQWQPATAGNINICEPCNCHGHATDCYYDAD 369
Score = 122 (48.0 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 40/130 (30%), Positives = 55/130 (42%)
Query: 67 SALGGNRT-RGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQ 125
S LGG R + RQ TGY+ F C CNC +CD +G+CIC
Sbjct: 1290 SPLGGQCICRPNVIGRQCSRCQTGYY-------GFPSCKLCNCGQR--LCDDLTGKCICP 1340
Query: 126 DNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQG------PCVQLDDDQVVCSECPR 178
T CE C R Y+ + L G C+ C C +G P + ++ Q C R
Sbjct: 1341 PRTVKPKCEVCERYYFSYHPLAG----CESCNCSERGVVNAARPECEKNNGQCKCKPGIR 1396
Query: 179 GYGGEKMSPG 188
G ++ +PG
Sbjct: 1397 GRQCDRCAPG 1406
Score = 121 (47.7 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 30/77 (38%), Positives = 34/77 (44%)
Query: 104 VPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
VPCNC+ + C G+CIC+ N G C RC GYYG CK C C Q
Sbjct: 1275 VPCNCHSEGSMSPTCSPLGGQCICRPNVIGRQCSRCQTGYYG------FPSCKLCNC-GQ 1327
Query: 161 GPCVQLDDDQVVCSECP 177
C DD C CP
Sbjct: 1328 RLC---DDLTGKCI-CP 1340
Score = 114 (45.2 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 100 FSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYY 141
F C+PC CN G D+CD ++G C+C++N G C+ C G +
Sbjct: 1410 FPNCIPCKCNRDGTEPDVCDPQTGICLCKENVEGAECDICRPGSF 1454
Score = 95 (38.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 26/96 (27%), Positives = 38/96 (39%)
Query: 103 CVPCNCNGHADI------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+ + C+ +G+C C+ G C+RCA G Y +C C
Sbjct: 1364 CESCNCSERGVVNAARPECEKNNGQCKCKPGIRGRQCDRCAPGTYD------FPNCIPCK 1417
Query: 157 CPNQGPCVQLDDDQV---VCSECPRGYGGEKMSPGA 189
C G + D Q +C E G + PG+
Sbjct: 1418 CNRDGTEPDVCDPQTGICLCKENVEGAECDICRPGS 1453
Score = 87 (35.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 18/38 (47%), Positives = 19/38 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
RC C+ N GD C C GYY ALE CK C C
Sbjct: 652 RCYCKSNVCGDFCNTCEAGYY--ALENKNYFGCKGCQC 687
Score = 84 (34.6 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 19/46 (41%), Positives = 21/46 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
+CIC+ N G C RC GYYG CK C C Q C L
Sbjct: 1295 QCICRPNVIGRQCSRCQTGYYG------FPSCKLCNC-GQRLCDDL 1333
Score = 69 (29.3 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 4 RCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQG 44
+CIC T CE C R Y+ + L G C+ C C +G
Sbjct: 1336 KCICPPRTVKPKCEVCERYYFSYHPLAG----CESCNCSERG 1373
Score = 61 (26.5 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 15/50 (30%), Positives = 20/50 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 53
+C C+ G C+RCA G Y +C C C G + D Q
Sbjct: 1388 QCKCKPGIRGRQCDRCAPGTYD------FPNCIPCKCNRDGTEPDVCDPQ 1431
Score = 52 (23.4 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 5 CICQDNTGGDNCERCARGYY 24
C+C++N G C+ C G +
Sbjct: 1435 CLCKENVEGAECDICRPGSF 1454
Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 39
R IC+ TG CE C G + ++ P
Sbjct: 545 RHSICEPTTG--QCE-CQTNVTGRQCDRCISAAPNFP 578
Score = 37 (18.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 161 GPCVQLDDDQ--VVCSECPRGY 180
G C+ + V C +C +GY
Sbjct: 387 GVCINCQHNTAGVNCEKCAKGY 408
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 215 (80.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 36/64 (56%), Positives = 43/64 (67%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHAD CD +G C+ CQD T G NCERC GYYG+ + G+ C+ CPCP
Sbjct: 861 FPSCQPCQCNGHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCP 920
Query: 159 NQGP 162
+ GP
Sbjct: 921 D-GP 923
Score = 163 (62.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 58/195 (29%), Positives = 78/195 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C G C+ CA GY+GN E + C+ C C N + D + +
Sbjct: 944 CVCDPGYIGSRCDDCASGYFGNPSEVGGS-CQPCQCHNN---IDTTDPEACD-------- 991
Query: 65 IKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPCN--------CNGHADI 114
K G + L T H Q GY+ + +CV CN CNG
Sbjct: 992 -KET--GRCLKCLYHTEGEHCQFCRFGYYGDALQQDC-RKCV-CNYLGTVQEHCNGSDCQ 1046
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQGPCVQLDDDQV 171
CD +G+C+C N G NC+RCA + A G T C C C + GP Q
Sbjct: 1047 CDKATGQCLCLPNVIGQNCDRCAPNTWQLA-SG--TGCDPCNCNAAHSFGPSCNEFTGQ- 1102
Query: 172 VCSECPRGYGGEKMS 186
C +C G+GG S
Sbjct: 1103 -C-QCMPGFGGRTCS 1115
Score = 152 (58.6 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 43/159 (27%), Positives = 69/159 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P----NQGPCVQLDDDQVSNLG 58
CQ NT G NCE+C YY + E + D C++C C P N+G C D +
Sbjct: 365 CQHNTMGRNCEQCKPFYYQHP-ERDIRDPNFCERCTCDPAGSQNEGICDSYTDFSTGLIA 423
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ R ++ + G + ++ Y L+ E G C P + CD+E
Sbjct: 424 GQCRCKLN--VEGEHCD---VCKEGFYDLSS---EDPFGCKSCACNPLGTIPGGNPCDSE 475
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+G C C+ G +C++C ++G L + C+ C C
Sbjct: 476 TGHCYCKRLVTGQHCDQCLPEHWG--LSNDLDGCRPCDC 512
Score = 133 (51.9 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ CQD T G NCERC GYYG+ + G+ C+ CPCP+ GP
Sbjct: 883 CLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPD-GP 923
Score = 130 (50.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 53/191 (27%), Positives = 79/191 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ N G++C+ C G+Y + E CK C C P + GN
Sbjct: 425 QCRCKLNVEGEHCDVCKEGFYDLSSEDPF-GCKSCAC---NPLGTIPG------GNPC-- 472
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN-GHA--DICDAESG 120
S G + L +T Q H H S C PC+C+ G A + C AESG
Sbjct: 473 --DSETGHCYCKRL-VTGQ-HCDQCLPEHWGLSND-LDGCRPCDCDLGGALNNSCFAESG 527
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR-- 178
+C C+ + G C GYY L+ + + ++ N GP V + + Q + P
Sbjct: 528 QCSCRPHMIGRQCNEVEPGYYFATLDHYLYEAEEA---NLGPGVSIVERQYIQDRIPSWT 584
Query: 179 GYGGEKMSPGA 189
G G ++ GA
Sbjct: 585 GAGFVRVPEGA 595
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/181 (26%), Positives = 69/181 (38%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE C Y+ EG ++ CK+C C D GN
Sbjct: 298 CMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSISCHFDMAVYLATGNV 357
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHAD--ICD 116
+ R + +YQ H E + C C C+ G + ICD
Sbjct: 358 SGGVCDDCQHNTMGRNCEQCKPFYYQ----HPERDIRDP-NFCERCTCDPAGSQNEGICD 412
Query: 117 AES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGP 162
+ + G+C C+ N G++C+ C G+Y + E CK C C P P
Sbjct: 413 SYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPF-GCKSCACNPLGTIPGGNP 471
Query: 163 C 163
C
Sbjct: 472 C 472
Score = 123 (48.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 103 CVPCNCNG-HA--DICDAESGRCICQDNTGGDNCERCARGYYGNA-LEGAVTDCK----Q 154
C PCNCN H+ C+ +G+C C GG C C ++G+ +E DC +
Sbjct: 1081 CDPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE 1140
Query: 155 CP-CPNQ-GPCVQLDD-DQVVCSECPRGYGG 182
P C G CV ++ + C +C RGY G
Sbjct: 1141 TPQCDQSTGQCVCVEGVEGPRCDKCTRGYSG 1171
Score = 105 (42.0 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 103 CVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+C+ G CD +G+C+C + G C++C RGY G + T C QC
Sbjct: 1129 CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD--CTPCHQC 1182
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 28/84 (33%), Positives = 38/84 (45%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC-----NGH--ADIC--DAESGR--CICQDNTGGDNCER 135
L GY+ +P G C PC C +G A C D + + C+C G C+
Sbjct: 899 LAGYYGDPIIGSG-DHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDD 957
Query: 136 CARGYYGNALEGAVTDCKQCPCPN 159
CA GY+GN E + C+ C C N
Sbjct: 958 CASGYFGNPSEVGGS-CQPCQCHN 980
Score = 82 (33.9 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C RCA G +G G CK C C QG
Sbjct: 791 QCQCRPNVVGRTCNRCAPGTFGFGPSG----CKPCECHLQG 827
Score = 71 (30.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C+C N G NC+RCA + A G T C C C
Sbjct: 1053 QCLCLPNVIGQNCDRCAPNTWQLA-SG--TGCDPCNC 1086
Score = 40 (19.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 98 GAFSRCVPCN-CNGHADICDAE 118
G F C PC+ C D+ AE
Sbjct: 1171 GVFPDCTPCHQCFALWDVIIAE 1192
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 213 (80.0 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 35/64 (54%), Positives = 43/64 (67%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHA+ CD +G C+ CQD T G NCERC GYYG+ + G+ C+ CPCP
Sbjct: 909 FPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCP 968
Query: 159 NQGP 162
+ GP
Sbjct: 969 D-GP 971
Score = 150 (57.9 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 50/184 (27%), Positives = 75/184 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P----NQGPCVQLDDDQVSNLG 58
CQ NT G NCE+C Y+ + E + D C+ C C P N G C D V +
Sbjct: 413 CQHNTMGRNCEQCKPFYFQHP-ERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIA 471
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ R ++ + G R + ++ Y L+ E G C P + CD+E
Sbjct: 472 GQCRCKLH--VEGERCD---VCKEGFYDLSA---EDPFGCKSCACNPLGTIPGGNPCDSE 523
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVVCSECP 177
+G C C+ G C++C ++G L + C+ C C G +D CS P
Sbjct: 524 TGYCYCKRLVTGQRCDQCLPQHWG--LSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLP 581
Query: 178 RGYG 181
G
Sbjct: 582 HMIG 585
Score = 150 (57.9 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 56/195 (28%), Positives = 78/195 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C G C+ CA GY+GN + + C+ C C + + D + +
Sbjct: 992 CVCDPGYIGSRCDGCASGYFGNPSDFGGS-CQPCQCHHN---IDTTDPEACD-------- 1039
Query: 65 IKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPCN--------CNGHADI 114
K G + L T H Q GY+ + +CV CN CNG
Sbjct: 1040 -KET--GRCLKCLYHTEGDHCQFCQHGYYGDALRQDC-RKCV-CNYLGTVREHCNGSDCH 1094
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQGPCVQLDDDQV 171
CD +G+C C N G NC+RCA + A G T C+ C C + GP Q
Sbjct: 1095 CDKTTGQCSCLPNVIGQNCDRCAPHTWQLA-SG--TGCEPCNCNAVHSFGPSCNEFTGQ- 1150
Query: 172 VCSECPRGYGGEKMS 186
C +C G+GG S
Sbjct: 1151 -C-QCMPGFGGRTCS 1163
Score = 137 (53.3 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 52/202 (25%), Positives = 77/202 (38%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE C Y+ EG ++ CK+C C D GN
Sbjct: 346 CMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNV 405
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADICD 116
+ + R + ++Q H E + C PC C+ G + ICD
Sbjct: 406 SGGVCDNCQHNTMGRNCEQCKPFYFQ----HPERDIRDP-NLCEPCTCDPAGSENGGICD 460
Query: 117 AES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGP 162
+ G+C C+ + G+ C+ C G+Y + E CK C C P P
Sbjct: 461 GYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPF-GCKSCACNPLGTIPGGNP 519
Query: 163 CVQLDDDQVVCSECPRGYGGEK 184
C D + C C R G++
Sbjct: 520 C---DSETGYCY-CKRLVTGQR 537
Score = 134 (52.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ CQD T G NCERC GYYG+ + G+ C+ CPCP+ GP
Sbjct: 931 CLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPD-GP 971
Score = 124 (48.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 103 CVPCNCNG-HA--DICDAESGRCICQDNTGGDNCERCARGYYGNA-LEGAVTDCK----Q 154
C PCNCN H+ C+ +G+C C GG C C ++G+ +E DC +
Sbjct: 1129 CEPCNCNAVHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE 1188
Query: 155 CP-CPNQ-GPCVQLDD-DQVVCSECPRGYGG 182
P C G CV ++ + C +C RGY G
Sbjct: 1189 TPQCDQSTGQCVCVEGVEGPRCDKCTRGYSG 1219
Score = 111 (44.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/74 (33%), Positives = 32/74 (43%)
Query: 106 CNCNGH---ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C C+ + +CD G+C C+ N G C RCA G +G G CK C C QG
Sbjct: 821 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNG----CKPCDCHLQGS 876
Query: 163 CVQLDDDQVVCSEC 176
D V +C
Sbjct: 877 VSAFCD--AVTGQC 888
Score = 107 (42.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 25/98 (25%), Positives = 41/98 (41%)
Query: 95 TSGGAFSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
T G + C PC+C+ + CDA +G+C C C+RC G++G
Sbjct: 858 TFGFGPNGCKPCDCHLQGSVSAFCDAVTGQCHCFQGIYARQCDRCLPGFWG------FPS 911
Query: 152 CKQCPCPNQGP-CVQLDDDQVVCSECPRGYGGEKMSPG 188
C+ C C C + + + C + G+ E+ G
Sbjct: 912 CQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAG 949
Score = 105 (42.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 103 CVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+C+ G CD +G+C+C + G C++C RGY G + T C QC
Sbjct: 1177 CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD--CTPCHQC 1230
Score = 96 (38.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/82 (31%), Positives = 37/82 (45%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC-----NGH--ADIC--DAESGR--CICQDNTGGDNCER 135
L GY+ +P G C PC C +G A C D + + C+C G C+
Sbjct: 947 LAGYYGDPIIGSG-DHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDG 1005
Query: 136 CARGYYGNALEGAVTDCKQCPC 157
CA GY+GN + + C+ C C
Sbjct: 1006 CASGYFGNPSDFGGS-CQPCQC 1026
Score = 95 (38.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 103 CVPCNCN-GHA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C PC+C+ G A + C +SG+C C + G C GYY L+ + + ++ N
Sbjct: 555 CRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTLDHYIYEAEEA---N 611
Query: 160 QGPCVQLDDDQVVCSECPR--GYGGEKMSPGA 189
GP V + + + + P G G ++ GA
Sbjct: 612 LGPGVVVVERRYIQDRIPSWTGPGFVRVPEGA 643
Score = 82 (33.9 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C RCA G +G G CK C C QG
Sbjct: 839 QCQCRPNVVGRTCNRCAPGTFGFGPNG----CKPCDCHLQG 875
Score = 73 (30.8 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGPC 46
+C C+ + G+ C+ C G+Y + E CK C C P PC
Sbjct: 473 QCRCKLHVEGERCDVCKEGFYDLSAEDPF-GCKSCACNPLGTIPGGNPC 520
Score = 67 (28.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C N G NC+RCA + A G T C+ C C
Sbjct: 1101 QCSCLPNVIGQNCDRCAPHTWQLA-SG--TGCEPCNC 1134
Score = 60 (26.2 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C++C ++G L + C+ C C
Sbjct: 527 CYCKRLVTGQRCDQCLPQHWG--LSNDLDGCRPCDC 560
Score = 50 (22.7 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
+C C + G C GYY L+ + + ++ N GP V
Sbjct: 576 QCSCLPHMIGRQCNEVESGYYFTTLDHYIYEAEEA---NLGPGV 616
Score = 40 (19.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 14/69 (20%), Positives = 26/69 (37%)
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-CDAESGRCIC 124
+SAL +R L L R++ ++ + + + A++ C G
Sbjct: 1396 QSALTRDRVEDLMLERESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMTCGTHPGADCS 1455
Query: 125 QDNTGGDNC 133
+ GG NC
Sbjct: 1456 ESECGGPNC 1464
Score = 36 (17.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 98 GAFSRCVPCN-CNGHADICDAE 118
G F C PC+ C D+ E
Sbjct: 1219 GVFPDCTPCHQCFALWDVIIGE 1240
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 206 (77.6 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 49/130 (37%), Positives = 67/130 (51%)
Query: 73 RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGD 131
+T G L R + L + G F C PC CNGHAD C+ +G C+ C+D+TGG+
Sbjct: 845 KTSGQCLCRTGAFGLRCDRCQRGQWG-FPSCRPCVCNGHADECNTHTGACLGCRDHTGGE 903
Query: 132 NCERCARGYYGNALEGAVTDCKQCPCPNQGP---------CVQLD-DDQVVCSECPRGYG 181
+CERC G++G+ C+ CPCP +GP C Q + Q+VC C GY
Sbjct: 904 HCERCIAGFHGDPRLPYGGQCRPCPCP-EGPGSQRHFATSCHQDEYSQQIVC-HCRAGYT 961
Query: 182 G---EKMSPG 188
G E +PG
Sbjct: 962 GLRCEACAPG 971
Score = 144 (55.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 52/207 (25%), Positives = 80/207 (38%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
CIC+ NT G NCE+C Y + A +G C++C C D GN
Sbjct: 310 CICKHNTRGLNCEQCQDFYRDLPWRPAEDGHSHACRKCECHGHTHSCHFDMAVYLASGNV 369
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHAD--IC 115
+ R L R Y+ +PT C C+C+ G D C
Sbjct: 370 SGGVCDGCQHNTAGRHCELCRPFFYR------DPTKDLRDPAVCRSCDCDPMGSQDGGRC 423
Query: 116 DAE--------SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQG 161
D+ SG+C C+++ G C++C G++G ++ + C++C C P
Sbjct: 424 DSHDDPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDRL-GCRRCQCNARGTVPGST 482
Query: 162 PCVQLDDDQVVCSECPRGYGGEKMSPG 188
PC + C G G ++ PG
Sbjct: 483 PC-DPNSGSCYCKRLVTGRGCDRCLPG 508
Score = 143 (55.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 55/198 (27%), Positives = 80/198 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P--NQ--GPCVQLDDDQVSNLG 58
CQ NT G +CE C +Y + + + D C+ C C P +Q G C DD + +
Sbjct: 377 CQHNTAGRHCELCRPFFYRDPTKD-LRDPAVCRSCDCDPMGSQDGGRCDSHDDPALGLVS 435
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
+ R + + +G TR +Q G G C C CN +
Sbjct: 436 GQCRCK-EHVVG---TR----CQQCRDGFFGLSISDRLG-----CRRCQCNARGTVPGST 482
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDD--Q 170
CD SG C C+ G C+RC G++G L + C+ C C G Q D+ Q
Sbjct: 483 PCDPNSGSCYCKRLVTGRGCDRCLPGHWG--LSHDLLGCRPCDCDVGGALDPQCDEGTGQ 540
Query: 171 VVCSECPRGYGGEKMSPG 188
C + G E++ PG
Sbjct: 541 CHCRQHMVGRRCEQVQPG 558
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 55/195 (28%), Positives = 75/195 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVS-NLGNRTRI 63
C C+ G CE CA G++G+ C+ C C G +D D + G R
Sbjct: 954 CHCRAGYTGLRCEACAPGHFGDPSRPGGR-CQLCEC--SGNIDPMDPDACDPHTGQCLRC 1010
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-------HADIC- 115
+ T G H + G+H + RC CN G D C
Sbjct: 1011 L-------HHTEG---PHCAHCK-PGFHGQAARQSCH-RCT-CNLLGTNPQQCPSPDQCH 1057
Query: 116 -DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQ--GPCVQLDDDQV 171
D SG+C C N G +C+RCA ++ N G C+ C C P++ GP Q
Sbjct: 1058 CDPSSGQCPCLPNVQGPSCDRCAPNFW-NLTSGH--GCQPCACHPSRARGPTCNEFTGQ- 1113
Query: 172 VCSECPRGYGGEKMS 186
C C G+GG S
Sbjct: 1114 -C-HCRAGFGGRTCS 1126
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 100 FSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
++ +PC CN + C+ G+C+C+ G C+ CA GYYG G C+ C
Sbjct: 777 YNGALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTG----CQACQ 832
Query: 157 CPNQG 161
C ++G
Sbjct: 833 CSHEG 837
Score = 116 (45.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ C+D+TGG++CERC G++G+ C+ CPCP +GP
Sbjct: 893 CLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP-EGP 933
Score = 95 (38.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 26/91 (28%), Positives = 38/91 (41%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCKQ---- 154
C PC C+ C+ +G+C C+ GG C C ++G+ L+ DC
Sbjct: 1092 CQPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWGDPGLQCHACDCDSRGID 1151
Query: 155 CP-CPN-QGPC-VQLDDDQVVCSECPRGYGG 182
P C G C + V C +C RG+ G
Sbjct: 1152 TPQCHRFTGHCSCRPGVSGVRCDQCARGFSG 1182
Score = 86 (35.3 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C+C+ G C+ CA GYYG G C+ C C ++G
Sbjct: 801 QCLCKPGVVGRRCDLCAPGYYGFGPTG----CQACQCSHEG 837
Score = 67 (28.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C+C+ G C+RC RG +G C+ C C
Sbjct: 849 QCLCRTGAFGLRCDRCQRGQWG------FPSCRPCVC 879
Score = 42 (19.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 102 RCVPCNCNGHADICDAESGR 121
RC +CNG A D GR
Sbjct: 1436 RCGGLSCNGAAATADLALGR 1455
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNC 133
C G A + G C+D G C
Sbjct: 1410 CGAPGDAPCATSPCGGAGCRDEDGQPRC 1437
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 230 (86.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 57/184 (30%), Positives = 79/184 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ NT G C++C G+YG+ +G DC+ C CP L I
Sbjct: 741 CQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCACPLSSAANNFSP--TCQLSEGEGIVCD 798
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-----ICDAESGR 121
L G G R + GY+ P G CVPC CNG+ + CD +G+
Sbjct: 799 KCLPGYT--GSRCERCAN----GYYGNPLVPG--QSCVPCECNGNVNPQEDGYCDTITGQ 850
Query: 122 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C+ C NT G +CE+CA GYYG+A+ C+ C C G + + +C
Sbjct: 851 CLKCVGNTAGLHCEKCADGYYGDAV--TEKSCRACECHVNGSLSSVCHHETGICDCKSDV 908
Query: 181 GGEK 184
G+K
Sbjct: 909 IGQK 912
Score = 224 (83.9 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 44/96 (45%), Positives = 52/96 (54%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
CVPC CN H++ CD E+G+C+ C+DNT GD C CA GYYG + G+V DC C CP
Sbjct: 1381 CVPCQCNNHSETCDPETGKCLNCRDNTVGDYCSACAPGYYGKVI-GSVNDCSLCACPRAN 1439
Query: 162 P------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
P CV C C GY G EK S G
Sbjct: 1440 PVSFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLG 1475
Score = 204 (76.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 43/107 (40%), Positives = 56/107 (52%)
Query: 87 LTGYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNA 144
L GY+ G F C PC CNGHA CD + G C CQ NT G C++C G+YG+
Sbjct: 705 LPGYYR--VDGILFGGICQPCKCNGHATECDTQ-GVCFACQHNTTGPFCDQCLPGFYGSP 761
Query: 145 LEGAVTDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
+G DC+ C CP N P QL + + +VC +C GY G +
Sbjct: 762 SQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSR 808
Score = 177 (67.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/179 (30%), Positives = 75/179 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C G CERCA GYYGN L + C C C G +D + + +K
Sbjct: 800 CLPGYTGSRCERCANGYYGNPLVPGQS-CVPCEC--NGNVNPQEDGYCDTITGQC---LK 853
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-ADICDAESGRCICQ 125
GN T GL + GY+ + + + C C+ NG + +C E+G C C+
Sbjct: 854 CV--GN-TAGLHCEKCAD----GYYGDAVTEKSCRAC-ECHVNGSLSSVCHHETGICDCK 905
Query: 126 DNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+ G C++C G+YG L G C C C G + + Q C C G GEK
Sbjct: 906 SDVIGQKCDKCLNGFYG-LLTGL--GCIPCNCSQFGSISEDCNHQGQC-HCLPGVAGEK 960
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 46/136 (33%), Positives = 62/136 (45%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C+ C+DNT GD C CA GYYG + G+V DC C CP P V V L
Sbjct: 1399 KCLNCRDNTVGDYCSACAPGYYGKVI-GSVNDCSLCACPRANP-VSFSPTCV--LKGVQD 1454
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPT-SGGAFSRCVPCNCNGHADI-CDAESG 120
+ L G G + + GY+ +P GG+ C CN +G + CD +G
Sbjct: 1455 YHCDACLPGYE--GQYCEKCS----LGYYGDPQLPGGSCHLC-QCNPSGSVHVNCDRVTG 1507
Query: 121 RCICQDNTGGDNCERC 136
+C C+ G CE C
Sbjct: 1508 KCPCKQGVTGQLCEEC 1523
Score = 143 (55.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
G+H SG C PC+C + C+A+SG+CIC +T G C+ C ++G + +
Sbjct: 967 GFHSLQKSG-----CTPCDCAHTQNNCNADSGQCICPPHTRGPKCDLCEENHWGLSPK-- 1019
Query: 149 VTDCKQCPCPNQGP-CVQLDDDQVVCSECPRGYGGEKMS 186
CK C C + G +Q D C +C +GG+ S
Sbjct: 1020 -LGCKACNCSDSGSDSLQCDVLTGQC-QCKAEFGGQNCS 1056
Score = 135 (52.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 48/165 (29%), Positives = 70/165 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPC--VQLDDDQVSNLGN 59
C+ C +T G NCE CA GY+ D C C C G V + D++ S+ +
Sbjct: 342 CLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPCYPCGCDPFGSLSSVCVKDERQSDSQH 401
Query: 60 RT---RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HA 112
T + + + G + A GY P C+ CNC+ G +
Sbjct: 402 GTWPGQCQCRDGYTGEKCDRCAF---------GYRGYPN-------CLRCNCSLIGSINE 445
Query: 113 DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
D C AE C+C++N G+NC+ C G+Y N E C +C C
Sbjct: 446 DPC-AEP--CLCKENVEGENCDLCKPGFY-NLQERNPEGCTECFC 486
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/178 (26%), Positives = 72/178 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+CIC +T G C+ C ++G + + CK C C + G D Q L + +
Sbjct: 994 QCICPPHTRGPKCDLCEENHWGLSPK---LGCKACNCSDSGS----DSLQCDVLTGQCQC 1046
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G-HADICD---- 116
K+ GG AL GY P CV C+C+ G A++CD
Sbjct: 1047 --KAEFGGQNCSRCAL---------GYRDYPD-------CVACDCDLSGTKAEMCDDTKG 1088
Query: 117 -----AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDD 168
E+G C C++N G C C G + + A+ C C C C++++D
Sbjct: 1089 LCGCEEETGICACKENVFGLQCSECKPGTFALSANNAL-GCTPCFCFGMSTSCLEVED 1145
Score = 128 (50.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 103 CVPCNCNGHADICDA--ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN- 159
C+PCNC+ I + G+C C G+ C+RCA G++ G C C C +
Sbjct: 929 CIPCNCSQFGSISEDCNHQGQCHCLPGVAGEKCDRCAHGFHSLQKSG----CTPCDCAHT 984
Query: 160 QGPCVQLDDDQVVCSECPRG 179
Q C D Q +C RG
Sbjct: 985 QNNC-NADSGQCICPPHTRG 1003
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/83 (34%), Positives = 38/83 (45%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C CNC+ G + CD +G+C C+ GG NC RCA GY DC C C
Sbjct: 1022 CKACNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGYRD------YPDCVACDCDL 1075
Query: 160 QGPCVQL-DDDQVVCSECPRGYG 181
G ++ DD + +C C G
Sbjct: 1076 SGTKAEMCDDTKGLCG-CEEETG 1097
Score = 71 (30.1 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ + G C++C G+YG L G C C C G
Sbjct: 902 CDCKSDVIGQKCDKCLNGFYG-LLTGL--GCIPCNCSQFG 938
Score = 66 (28.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 5 CICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPCPNQGPCVQLDDDQV 54
C C G +CE C GYY L G + C+ C C G + D V
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGI--CQPCKC--NGHATECDTQGV 737
Score = 45 (20.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 173 CSECPRGYGGEKMSPG 188
C C GY G + PG
Sbjct: 809 CERCANGYYGNPLVPG 824
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 230 (86.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 57/184 (30%), Positives = 79/184 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ NT G C++C G+YG+ +G DC+ C CP L I
Sbjct: 741 CQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCACPLSSAANNFSP--TCQLSEGEGIVCD 798
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-----ICDAESGR 121
L G G R + GY+ P G CVPC CNG+ + CD +G+
Sbjct: 799 KCLPGYT--GSRCERCAN----GYYGNPLVPG--QSCVPCECNGNVNPQEDGYCDTITGQ 850
Query: 122 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C+ C NT G +CE+CA GYYG+A+ C+ C C G + + +C
Sbjct: 851 CLKCVGNTAGLHCEKCADGYYGDAV--TEKSCRACECHVNGSLSSVCHHETGICDCKSDV 908
Query: 181 GGEK 184
G+K
Sbjct: 909 IGQK 912
Score = 224 (83.9 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 44/96 (45%), Positives = 52/96 (54%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
CVPC CN H++ CD E+G+C+ C+DNT GD C CA GYYG + G+V DC C CP
Sbjct: 1381 CVPCQCNNHSETCDPETGKCLNCRDNTVGDYCSACAPGYYGKVI-GSVNDCSLCACPRAN 1439
Query: 162 P------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
P CV C C GY G EK S G
Sbjct: 1440 PVSFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLG 1475
Score = 204 (76.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 43/107 (40%), Positives = 56/107 (52%)
Query: 87 LTGYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNA 144
L GY+ G F C PC CNGHA CD + G C CQ NT G C++C G+YG+
Sbjct: 705 LPGYYR--VDGILFGGICQPCKCNGHATECDTQ-GVCFACQHNTTGPFCDQCLPGFYGSP 761
Query: 145 LEGAVTDCKQCPCP------NQGPCVQLDDDQ-VVCSECPRGYGGEK 184
+G DC+ C CP N P QL + + +VC +C GY G +
Sbjct: 762 SQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCLPGYTGSR 808
Score = 177 (67.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 54/179 (30%), Positives = 75/179 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C G CERCA GYYGN L + C C C G +D + + +K
Sbjct: 800 CLPGYTGSRCERCANGYYGNPLVPGQS-CVPCEC--NGNVNPQEDGYCDTITGQC---LK 853
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-ADICDAESGRCICQ 125
GN T GL + GY+ + + + C C+ NG + +C E+G C C+
Sbjct: 854 CV--GN-TAGLHCEKCAD----GYYGDAVTEKSCRAC-ECHVNGSLSSVCHHETGICDCK 905
Query: 126 DNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+ G C++C G+YG L G C C C G + + Q C C G GEK
Sbjct: 906 SDVIGQKCDKCLNGFYG-LLTGL--GCIPCNCSQFGSISEDCNHQGQC-HCLPGVAGEK 960
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 46/136 (33%), Positives = 62/136 (45%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C+ C+DNT GD C CA GYYG + G+V DC C CP P V V L
Sbjct: 1399 KCLNCRDNTVGDYCSACAPGYYGKVI-GSVNDCSLCACPRANP-VSFSPTCV--LKGVQD 1454
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPT-SGGAFSRCVPCNCNGHADI-CDAESG 120
+ L G G + + GY+ +P GG+ C CN +G + CD +G
Sbjct: 1455 YHCDACLPGYE--GQYCEKCS----LGYYGDPQLPGGSCHLC-QCNPSGSVHVNCDRVTG 1507
Query: 121 RCICQDNTGGDNCERC 136
+C C+ G CE C
Sbjct: 1508 KCPCKQGVTGQLCEEC 1523
Score = 143 (55.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
G+H SG C PC+C + C+A+SG+CIC +T G C+ C ++G + +
Sbjct: 967 GFHSLQKSG-----CTPCDCAHTQNNCNADSGQCICPPHTRGPKCDLCEENHWGLSPK-- 1019
Query: 149 VTDCKQCPCPNQGP-CVQLDDDQVVCSECPRGYGGEKMS 186
CK C C + G +Q D C +C +GG+ S
Sbjct: 1020 -LGCKACNCSDSGSDSLQCDVLTGQC-QCKAEFGGQNCS 1056
Score = 135 (52.6 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 48/165 (29%), Positives = 70/165 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPC--VQLDDDQVSNLGN 59
C+ C +T G NCE CA GY+ D C C C G V + D++ S+ +
Sbjct: 342 CLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPCYPCGCDPFGSLSSVCVKDERQSDSQH 401
Query: 60 RT---RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HA 112
T + + + G + A GY P C+ CNC+ G +
Sbjct: 402 GTWPGQCQCRDGYTGEKCDRCAF---------GYRGYPN-------CLRCNCSLIGSINE 445
Query: 113 DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
D C AE C+C++N G+NC+ C G+Y N E C +C C
Sbjct: 446 DPC-AEP--CLCKENVEGENCDLCKPGFY-NLQERNPEGCTECFC 486
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/178 (26%), Positives = 72/178 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+CIC +T G C+ C ++G + + CK C C + G D Q L + +
Sbjct: 994 QCICPPHTRGPKCDLCEENHWGLSPK---LGCKACNCSDSGS----DSLQCDVLTGQCQC 1046
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G-HADICD---- 116
K+ GG AL GY P CV C+C+ G A++CD
Sbjct: 1047 --KAEFGGQNCSRCAL---------GYRDYPD-------CVACDCDLSGTKAEMCDDTKG 1088
Query: 117 -----AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDD 168
E+G C C++N G C C G + + A+ C C C C++++D
Sbjct: 1089 LCGCEEETGICACKENVFGLQCSECKPGTFALSANNAL-GCTPCFCFGMSTSCLEVED 1145
Score = 128 (50.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 103 CVPCNCNGHADICDA--ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN- 159
C+PCNC+ I + G+C C G+ C+RCA G++ G C C C +
Sbjct: 929 CIPCNCSQFGSISEDCNHQGQCHCLPGVAGEKCDRCAHGFHSLQKSG----CTPCDCAHT 984
Query: 160 QGPCVQLDDDQVVCSECPRG 179
Q C D Q +C RG
Sbjct: 985 QNNC-NADSGQCICPPHTRG 1003
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/83 (34%), Positives = 38/83 (45%)
Query: 103 CVPCNCN--GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C CNC+ G + CD +G+C C+ GG NC RCA GY DC C C
Sbjct: 1022 CKACNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGYRD------YPDCVACDCDL 1075
Query: 160 QGPCVQL-DDDQVVCSECPRGYG 181
G ++ DD + +C C G
Sbjct: 1076 SGTKAEMCDDTKGLCG-CEEETG 1097
Score = 71 (30.1 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ + G C++C G+YG L G C C C G
Sbjct: 902 CDCKSDVIGQKCDKCLNGFYG-LLTGL--GCIPCNCSQFG 938
Score = 66 (28.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 5 CICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPCPNQGPCVQLDDDQV 54
C C G +CE C GYY L G + C+ C C G + D V
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGI--CQPCKC--NGHATECDTQGV 737
Score = 45 (20.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 173 CSECPRGYGGEKMSPG 188
C C GY G + PG
Sbjct: 809 CERCANGYYGNPLVPG 824
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 207 (77.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHA CD +G C+ CQD T G NCERC GYYG+ + G+ C+ CPCP
Sbjct: 861 FPSCQPCQCNGHALDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCP 920
Query: 159 NQGP 162
+ GP
Sbjct: 921 D-GP 923
Score = 150 (57.9 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 50/184 (27%), Positives = 75/184 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P----NQGPCVQLDDDQVSNLG 58
CQ NT G NCE+C Y+ + E + D C+ C C P N G C D V +
Sbjct: 365 CQHNTMGRNCEQCKPFYFQHP-ERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIA 423
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ R ++ + G R + ++ Y L+ E G C P + CD+E
Sbjct: 424 GQCRCKLH--VEGERCD---VCKEGFYDLSA---EDPYGCKSCACNPLGTIPGGNPCDSE 475
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVVCSECP 177
+G C C+ G C++C ++G L + C+ C C G +D CS P
Sbjct: 476 TGYCYCKRLVTGQRCDQCLPQHWG--LSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLP 533
Query: 178 RGYG 181
G
Sbjct: 534 HMIG 537
Score = 149 (57.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 56/195 (28%), Positives = 78/195 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C G C+ CA G++GN + + C+ C C + + D + +
Sbjct: 944 CVCDPGYIGSRCDDCASGFFGNPSDFGGS-CQPCQCHHN---IDTTDPEACD-------- 991
Query: 65 IKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPCN--------CNGHADI 114
K G + L T H QL GY+ + +CV CN CNG
Sbjct: 992 -KET--GRCLKCLYHTEGDHCQLCQYGYYGDALRQDC-RKCV-CNYLGTVKEHCNGSDCH 1046
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQGPCVQLDDDQV 171
CD +G+C C N G NC+RCA + A G T C C C + GP Q
Sbjct: 1047 CDKATGQCSCLPNVIGQNCDRCAPNTWQLA-SG--TGCGPCNCNAAHSFGPSCNEFTGQ- 1102
Query: 172 VCSECPRGYGGEKMS 186
C +C G+GG S
Sbjct: 1103 -C-QCMPGFGGRTCS 1115
Score = 137 (53.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 52/202 (25%), Positives = 77/202 (38%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE C Y+ EG ++ CK+C C D GN
Sbjct: 298 CMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNV 357
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADICD 116
+ + R + ++Q H E + C PC C+ G + ICD
Sbjct: 358 SGGVCDNCQHNTMGRNCEQCKPFYFQ----HPERDIRDP-NLCEPCTCDPAGSENGGICD 412
Query: 117 AES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGP 162
+ G+C C+ + G+ C+ C G+Y + E CK C C P P
Sbjct: 413 GYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPY-GCKSCACNPLGTIPGGNP 471
Query: 163 CVQLDDDQVVCSECPRGYGGEK 184
C D + C C R G++
Sbjct: 472 C---DSETGYCY-CKRLVTGQR 489
Score = 134 (52.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ CQD T G NCERC GYYG+ + G+ C+ CPCP+ GP
Sbjct: 883 CLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPD-GP 923
Score = 123 (48.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 103 CVPCNCNG-HA--DICDAESGRCICQDNTGGDNCERCARGYYGNA-LEGAVTDCK----Q 154
C PCNCN H+ C+ +G+C C GG C C ++G+ +E DC +
Sbjct: 1081 CGPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE 1140
Query: 155 CP-CPNQ-GPCVQLDD-DQVVCSECPRGYGG 182
P C G CV ++ + C +C RGY G
Sbjct: 1141 TPQCDQSTGQCVCVEGVEGPRCDKCTRGYSG 1171
Score = 113 (44.8 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 28/98 (28%), Positives = 42/98 (42%)
Query: 95 TSGGAFSRCVPCNCN--GHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
T G + C PC+C+ G A CDA +G+C C C+RC GY+G
Sbjct: 810 TFGFGPNGCKPCDCHLQGSASAFCDAITGQCHCFQGIYARQCDRCLPGYWG------FPS 863
Query: 152 CKQCPCPNQG-PCVQLDDDQVVCSECPRGYGGEKMSPG 188
C+ C C C + + + C + G+ E+ G
Sbjct: 864 CQPCQCNGHALDCDTVTGECLSCQDYTTGHNCERCLAG 901
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 24/74 (32%), Positives = 32/74 (43%)
Query: 106 CNCNGH---ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C C+ + +CD G+C C+ N G C RCA G +G G CK C C QG
Sbjct: 773 CECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNG----CKPCDCHLQGS 828
Query: 163 CVQLDDDQVVCSEC 176
D + +C
Sbjct: 829 ASAFCD--AITGQC 840
Score = 105 (42.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 103 CVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C C+C+ G CD +G+C+C + G C++C RGY G + T C QC
Sbjct: 1129 CRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPD--CTPCHQC 1182
Score = 98 (39.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 103 CVPCNCN-GHA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C PC+C+ G A + C +SG+C C + G C GYY L+ + + ++ N
Sbjct: 507 CRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTLDHYIYEAEEA---N 563
Query: 160 QGPCVQLDDDQVVCSECPR--GYGGEKMSPGA 189
GP V + + Q + P G G ++ GA
Sbjct: 564 LGPGVIVVERQYIQDRIPSWTGPGFVRVPEGA 595
Score = 92 (37.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 25/82 (30%), Positives = 37/82 (45%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC-----NGH--ADIC--DAESGR--CICQDNTGGDNCER 135
L GY+ +P G C PC C +G A C D + + C+C G C+
Sbjct: 899 LAGYYGDPIIGSG-DHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDD 957
Query: 136 CARGYYGNALEGAVTDCKQCPC 157
CA G++GN + + C+ C C
Sbjct: 958 CASGFFGNPSDFGGS-CQPCQC 978
Score = 82 (33.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C RCA G +G G CK C C QG
Sbjct: 791 QCQCRPNVVGRTCNRCAPGTFGFGPNG----CKPCDCHLQG 827
Score = 73 (30.8 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGPC 46
+C C+ + G+ C+ C G+Y + E CK C C P PC
Sbjct: 425 QCRCKLHVEGERCDVCKEGFYDLSAEDPY-GCKSCACNPLGTIPGGNPC 472
Score = 66 (28.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C N G NC+RCA + A G T C C C
Sbjct: 1053 QCSCLPNVIGQNCDRCAPNTWQLA-SG--TGCGPCNC 1086
Score = 60 (26.2 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C++C ++G L + C+ C C
Sbjct: 479 CYCKRLVTGQRCDQCLPQHWG--LSNDLDGCRPCDC 512
Score = 50 (22.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
+C C + G C GYY L+ + + ++ N GP V
Sbjct: 528 QCSCLPHMIGRQCNEVESGYYFTTLDHYIYEAEEA---NLGPGV 568
Score = 35 (17.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 5/10 (50%), Positives = 6/10 (60%)
Query: 98 GAFSRCVPCN 107
G F C PC+
Sbjct: 1171 GVFPDCTPCH 1180
>UNIPROTKB|E5RFQ2 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] GO:GO:0050873 GO:GO:0005605
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0001568 EMBL:Z99289 EMBL:AL590106
HGNC:HGNC:6484 ChiTaRS:LAMA4 IPI:IPI00983822
ProteinModelPortal:E5RFQ2 SMR:E5RFQ2 Ensembl:ENST00000521398
ArrayExpress:E5RFQ2 Bgee:E5RFQ2 Uniprot:E5RFQ2
Length = 331
Score = 187 (70.9 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
G+ H T G CVPC+CNG+++ C SG C+ CQ NT G++CE+C GY G+++ G
Sbjct: 70 GFFH--TLSG---ECVPCDCNGNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDSIRG 124
Query: 148 AVTDCKQCPCP-----NQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
A C+ CPCP N + V C C Y G E+ +PG
Sbjct: 125 APQFCQPCPCPLPHLANFAESCYRKNGAVRCI-CNENYAGPNCERCAPG 172
Score = 175 (66.7 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 48/116 (41%), Positives = 60/116 (51%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCN-GH----ADICDAESG--RCICQDNTGGDNCERCARG 139
L GY + G A C PC C H A+ C ++G RCIC +N G NCERCA G
Sbjct: 114 LDGYIGDSIRG-APQFCQPCPCPLPHLANFAESCYRKNGAVRCICNENYAGPNCERCAPG 172
Query: 140 YYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVV--CSECPR---GYGGEKMSPG 188
YYGN L T CK+C C N P + +D D+V C C R G+ E+ +PG
Sbjct: 173 YYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPG 227
Score = 145 (56.1 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 37/100 (37%), Positives = 51/100 (51%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI------CDAESGRCI-CQDNTGGDNCERCARGYY 141
GY+ P G S C C+C+G++D CD +G+C C NT G CERCA GYY
Sbjct: 172 GYYGNPLLIG--STCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYY 229
Query: 142 GNALEG---AVTDCKQCPCPN-QGPCVQLDDDQVVCSECP 177
G+A AV +C PC + G C++ + +CP
Sbjct: 230 GDARIAKNCAVCNCGGGPCDSVTGECLEEGFEPPTGMDCP 269
Score = 142 (55.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 46/140 (32%), Positives = 61/140 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVSNLGNRT 61
RCIC +N G NCERCA GYYGN L T CK+C C N P + +D D+V+
Sbjct: 154 RCICNENYAGPNCERCAPGYYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEVTG----- 207
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-ADICDAESG 120
+ ++ L T G R GY+ + C CNC G D E
Sbjct: 208 --QCRNCL--RNTTGFKCERCA----PGYYGDARIA---KNCAVCNCGGGPCDSVTGECL 256
Query: 121 RCICQDNTGGD----NCERC 136
+ TG D +C++C
Sbjct: 257 EEGFEPPTGMDCPTISCDKC 276
Score = 122 (48.0 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ CQ NT G++CE+C GY G+++ GA C+ CPCP
Sbjct: 98 CVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCP 135
>MGI|MGI:109321 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IDA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 MGI:MGI:109321
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
eggNOG:NOG247347 GO:GO:0005606 CTD:3910 HOVERGEN:HBG052299
KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB ChiTaRS:LAMA4 EMBL:U58950
EMBL:Y09827 EMBL:U59865 EMBL:BC115942 EMBL:U88352 EMBL:U69176
IPI:IPI00223446 RefSeq:NP_034811.2 UniGene:Mm.258065
ProteinModelPortal:P97927 SMR:P97927 STRING:P97927
PhosphoSite:P97927 PaxDb:P97927 PRIDE:P97927
Ensembl:ENSMUST00000019992 GeneID:16775 KEGG:mmu:16775
UCSC:uc007evq.2 HOGENOM:HOG000113278 InParanoid:Q14BF2
NextBio:290616 Bgee:P97927 CleanEx:MM_LAMA4 Genevestigator:P97927
GermOnline:ENSMUSG00000019846 Uniprot:P97927
Length = 1816
Score = 172 (65.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP--- 158
C PC+CNG++ C SG C+ CQ NT G++CE+C GY G+++ G C+ CPCP
Sbjct: 79 CAPCDCNGNSHECLDGSGFCLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPCPCPLPH 138
Query: 159 --NQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
N + V C C Y G E+ +PG
Sbjct: 139 LANFAESCYRKNGAVRCI-CKENYVGPNCERCAPG 172
Score = 168 (64.2 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 42/100 (42%), Positives = 55/100 (55%)
Query: 103 CVPCNCN-GH----ADICDAESG--RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C PC C H A+ C ++G RCIC++N G NCERCA GYYGN L T CK+C
Sbjct: 129 CQPCPCPLPHLANFAESCYRKNGAVRCICKENYVGPNCERCAPGYYGNPLLIGST-CKKC 187
Query: 156 PCP-NQGPCVQLDD-DQVV--CSECPR---GYGGEKMSPG 188
C N P + +D D++ C C R G+ E+ +PG
Sbjct: 188 DCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKCERCAPG 227
Score = 143 (55.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 34/82 (41%), Positives = 43/82 (52%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI------CDAESGRCI-CQDNTGGDNCERCARGYY 141
GY+ P G S C C+C+G++D CD +G+C C NT G CERCA GYY
Sbjct: 172 GYYGNPLLIG--STCKKCDCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKCERCAPGYY 229
Query: 142 GNALEGAVTDCKQCPCPNQGPC 163
G+A +C C C GPC
Sbjct: 230 GDAR--TAKNCAVCNCGG-GPC 248
Score = 141 (54.7 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 44/133 (33%), Positives = 59/133 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVSNLGNRT 61
RCIC++N G NCERCA GYYGN L T CK+C C N P + +D D+++
Sbjct: 154 RCICKENYVGPNCERCAPGYYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEITG----- 207
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-ADICDAESG 120
+ ++ L T G R GY+ + + C CNC G D E
Sbjct: 208 --QCRNCL--RNTTGFKCERCA----PGYYGDARTA---KNCAVCNCGGGPCDSVTGECL 256
Query: 121 RCICQDNTGGDNC 133
+ TG D C
Sbjct: 257 EEGFEVPTGCDKC 269
Score = 117 (46.2 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ CQ NT G++CE+C GY G+++ G C+ CPCP
Sbjct: 98 CLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPCPCP 135
Score = 65 (27.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERC 136
GY+ + + C CNC G CD+ +G C+ + C++C
Sbjct: 227 GYYGDARTA---KNCAVCNCGGGP--CDSVTGECLEEGFEVPTGCDKC 269
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 206 (77.6 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 50/129 (38%), Positives = 64/129 (49%)
Query: 74 TRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDN 132
T G L R + L H + G F C PC CNG AD CDA +G C+ C+D TGG++
Sbjct: 849 TSGQCLCRTGAFGLRCDHCQRGQWG-FPNCRPCVCNGRADECDAHTGACLGCRDYTGGEH 907
Query: 133 CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD----------DDQVVCSECPRGYGG 182
CERC G++G+ C+ CPCP +GP Q Q+VC C GY G
Sbjct: 908 CERCIAGFHGDPRLPYGGQCRPCPCP-EGPGSQRHFATSCHRDGYSQQIVC-HCRAGYTG 965
Query: 183 ---EKMSPG 188
E +PG
Sbjct: 966 LRCEACAPG 974
Score = 156 (60.0 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 57/197 (28%), Positives = 81/197 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGA--VTDCKQCPC-P--NQ--GPCVQLDDDQVSNLGN 59
CQ NT G +CE C +Y + + C+ C C P +Q G C DD V L +
Sbjct: 380 CQHNTAGRHCELCRPFFYRDPTKDMRDPAACRPCDCDPMGSQDGGRC-DSHDDPVLGLVS 438
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI----- 114
+ R K + G R + R + L+ + P C C CN +
Sbjct: 439 G-QCRCKEHVVGTRCQQC---RDGFFGLSASN--PRG------CQRCQCNSRGTVPGGTP 486
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVVC 173
CD+ SG C C+ GD C+RC G++G L + C+ C C G Q D+ C
Sbjct: 487 CDSSSGTCFCKRLVTGDGCDRCLPGHWG--LSHDLLGCRPCDCDVGGALDPQCDEATGQC 544
Query: 174 SECPRGYGG--EKMSPG 188
P G E++ PG
Sbjct: 545 PCRPHMIGRRCEQVQPG 561
Score = 153 (58.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 53/207 (25%), Positives = 81/207 (39%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
CIC+ NT G NCE+C Y + A +G C++C C D GN
Sbjct: 313 CICKHNTRGLNCEQCQDFYQDLPWHPAEDGHTHACRKCECNGHSHSCHFDMAVYLASGNV 372
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF-SRCVPCNCN--GHAD--IC 115
+ R L R Y+ +PT + C PC+C+ G D C
Sbjct: 373 SGGVCDGCQHNTAGRHCELCRPFFYR------DPTKDMRDPAACRPCDCDPMGSQDGGRC 426
Query: 116 DAE--------SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG------ 161
D+ SG+C C+++ G C++C G++G + C++C C ++G
Sbjct: 427 DSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASNP-RGCQRCQCNSRGTVPGGT 485
Query: 162 PCVQLDDDQVVCSECPRGYGGEKMSPG 188
PC C G G ++ PG
Sbjct: 486 PC-DSSSGTCFCKRLVTGDGCDRCLPG 511
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 55/198 (27%), Positives = 76/198 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+ G CE CA G++G+ + C+ C C +D T
Sbjct: 957 CHCRAGYTGLRCEACAPGHFGDPSKPGGR-CQLCECSGN-----IDPTDPGACDPHT--- 1007
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR--CVPCNCN--G-------HAD 113
G R L T H G H +P G +R C C CN G D
Sbjct: 1008 ------GQCLRCLHHTEGPH---CG-HCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTD 1057
Query: 114 IC--DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQ--GPCVQLDD 168
+C D +G+C C + G +C+RCA ++ N G C+ C C P++ GP
Sbjct: 1058 LCHCDPSTGQCPCLPHVQGLSCDRCAPNFW-NFTSGR--GCQPCACHPSRARGPTCNEFT 1114
Query: 169 DQVVCSECPRGYGGEKMS 186
Q C C G+GG S
Sbjct: 1115 GQ--C-HCHAGFGGRTCS 1129
Score = 113 (44.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ C+D TGG++CERC G++G+ C+ CPCP +GP
Sbjct: 896 CLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP-EGP 936
Score = 109 (43.4 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 100 FSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
++ +PC C+ + C+ G+C C+ G C+ CA GYYG G C+ C
Sbjct: 780 YNGALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAG----CQACQ 835
Query: 157 CPNQG 161
C G
Sbjct: 836 CSPDG 840
Score = 109 (43.4 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 30/100 (30%), Positives = 44/100 (44%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGH---ADICDAESGRCICQDNTGGDNCERCARGYYGNA 144
TGY+ +G C C C+ + +C+ SG+C+C+ G C+ C RG +G
Sbjct: 821 TGYYGFGPAG-----CQACQCSPDGALSALCEGTSGQCLCRTGAFGLRCDHCQRGQWG-- 873
Query: 145 LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY-GGE 183
+C+ C C G + D C C R Y GGE
Sbjct: 874 ----FPNCRPCVC--NGRADECDAHTGACLGC-RDYTGGE 906
Score = 96 (38.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 26/92 (28%), Positives = 38/92 (41%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----- 153
C PC C+ C+ +G+C C GG C C ++G+ L+ DC
Sbjct: 1095 CQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELHWGDPGLQCRACDCDPRGID 1154
Query: 154 --QCPCPNQGPC-VQLDDDQVVCSECPRGYGG 182
QC + G C + V C +C RG+ G
Sbjct: 1155 KPQCH-RSTGHCSCRPGVSGVRCDQCARGFSG 1185
Score = 78 (32.5 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C+ CA GYYG G C+ C C G
Sbjct: 804 QCRCKPGVVGRRCDACATGYYGFGPAG----CQACQCSPDG 840
Score = 77 (32.2 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ GD C+RC G++G L + C+ C C
Sbjct: 494 CFCKRLVTGDGCDRCLPGHWG--LSHDLLGCRPCDC 527
Score = 77 (32.2 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+++ G C++C G++G + C++C C ++G
Sbjct: 440 QCRCKEHVVGTRCQQCRDGFFGLSASNP-RGCQRCQCNSRG 479
Score = 47 (21.6 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 22/83 (26%), Positives = 33/83 (39%)
Query: 54 VSNLGNRTRIRIKSALGGNR---TRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG 110
VSN + TR R + +G R R +Q +L+ + H + G + V C G
Sbjct: 1361 VSNSAD-TRRRAEVLMGAQRENFNRQHLANQQALGRLSTHTHTLSLTGV-NELV-CGAPG 1417
Query: 111 HADICDAESGRCICQDNTGGDNC 133
A + G C+D G C
Sbjct: 1418 DAPCATSPCGGAGCRDEDGQPRC 1440
Score = 43 (20.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C+ + G CE+ GY+
Sbjct: 543 QCPCRPHMIGRRCEQVQPGYF 563
Score = 39 (18.8 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 173 CSECPRGYGGEKMSPGAQ 190
C C G+ G+ PG +
Sbjct: 968 CEACAPGHFGDPSKPGGR 985
Score = 35 (17.4 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 137 ARGYYGNALEGAVTDCK 153
A+G A+ GAV D K
Sbjct: 1620 AQGAAQGAIRGAVVDTK 1636
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 206 (77.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 56/187 (29%), Positives = 82/187 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD-DDQVSNLGNRTR 62
C+ C+D+TGG++CERC G++G+ C+ CPCP +GP Q G +
Sbjct: 896 CVGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP-EGPGSQRHFATSCHRDGYSQQ 954
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-----ICDA 117
I G R A G+ +P+ +C PC CNG+ D CD
Sbjct: 955 IMCHCRAGYTGLRCEACA-------PGHFGDPSRPDG--QCQPCECNGNIDPMDPDACDP 1005
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGPCVQLDDDQ 170
+G+C+ C +T G +C C G+YG A A C +C C P Q P + +
Sbjct: 1006 RTGQCLRCLYHTEGPHCAHCKPGFYGQA---ARQSCHRCTCNLLGTDPQQCPSIDRCNCD 1062
Query: 171 VVCSECP 177
+CP
Sbjct: 1063 PSSGQCP 1069
Score = 204 (76.9 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 42/103 (40%), Positives = 56/103 (54%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHAD CD +G C+ C+D+TGG++CERC G++G+ C+ CPCP
Sbjct: 874 FPSCQPCVCNGHADECDTHTGACVGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP 933
Query: 159 NQGPCVQLD----------DDQVVCSECPRGYGG---EKMSPG 188
+GP Q Q++C C GY G E +PG
Sbjct: 934 -EGPGSQRHFATSCHRDGYSQQIMC-HCRAGYTGLRCEACAPG 974
Score = 133 (51.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 52/198 (26%), Positives = 78/198 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P--NQ--GPCVQLDDDQVSNLG 58
CQ NT G +CE C +Y + + + D C+ C C P +Q G C DD + +
Sbjct: 380 CQHNTAGRHCELCRPFFYRDPSKD-LRDPAMCRSCDCDPMGSQDGGRCDPHDDPALGLVS 438
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
+ R K + G+R + R + L+ +P C C C+ +
Sbjct: 439 GQCRC--KEHVVGSRCQQC---RDGFFGLSA--SDPAG------CRRCQCDARGTVPGTT 485
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG---PCVQLDDDQ 170
CD SG C C+ G C C G++G L + C+ C C G P Q
Sbjct: 486 SCDPNSGTCFCKRLVTGRGCNHCLPGHWG--LSHDLLGCRPCDCDVGGALDPQCSEATGQ 543
Query: 171 VVCSECPRGYGGEKMSPG 188
C + G E++ PG
Sbjct: 544 CRCRQHMVGRRCEQVQPG 561
Score = 131 (51.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 51/202 (25%), Positives = 76/202 (37%)
Query: 5 CICQDNTGGDNCERCARGYYG----NALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE+C Y+ A +G C++C C D GN
Sbjct: 313 CVCKHNTRGLNCEQCQDFYHDLPWRPAEDGHSHACRKCECHGHAHSCHFDMAIYLASGNV 372
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCN------CNGHAD- 113
+ R L R Y+ + C P C+ H D
Sbjct: 373 SGGVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDPAMCRSCDCDPMGSQDGGRCDPHDDP 432
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQG--P-CVQLDDD 169
SG+C C+++ G C++C G++G +A + A C++C C +G P D +
Sbjct: 433 ALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDPA--GCRRCQCDARGTVPGTTSCDPN 490
Query: 170 QVVCSECPR---GYGGEKMSPG 188
C C R G G PG
Sbjct: 491 SGTCF-CKRLVTGRGCNHCLPG 511
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 100 FSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
+S +PC C+ + C+ G+C+C+ G C+ CA G+YG G C+ C
Sbjct: 780 YSGALPCQCDPQGSLSSECNPHGGQCVCKPAVVGRRCDHCAPGFYGFGPTG----CQACQ 835
Query: 157 CPNQGPCVQLDDDQVVCSECP 177
C +G L ++ +CP
Sbjct: 836 CSPEGALSGLCEE--TSGQCP 854
Score = 106 (42.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/75 (36%), Positives = 35/75 (46%)
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQ--GPCVQLDDDQV 171
CD SG+C C N G C+RCA ++ N G C+ C C P++ GP Q
Sbjct: 1061 CDPSSGQCPCLPNVQGPTCDRCAPNFW-NLTSGH--GCQPCTCHPSRARGPTCNEFTGQ- 1116
Query: 172 VCSECPRGYGGEKMS 186
C C G+GG S
Sbjct: 1117 -C-HCRAGFGGRTCS 1129
Score = 101 (40.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/134 (29%), Positives = 53/134 (39%)
Query: 37 QCPC-PN-QGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLA---LTRQTHYQLTGYH 91
QCPC PN QGP NL + + +R RG T Q H + G+
Sbjct: 1067 QCPCLPNVQGPTCDRCAPNFWNLTSGHGCQ-PCTCHPSRARGPTCNEFTGQCHCR-AGFG 1124
Query: 92 HEPTS-------GGAFSRCVPCNCNGHA-DI--CDAESGRCICQDNTGGDNCERCARGYY 141
S G +C C+C+ H D C +G C C+ G C++CARG+
Sbjct: 1125 GRTCSECQELHWGDPGLQCRACDCDPHGIDTPQCHRSTGHCSCRPGVSGVRCDQCARGFS 1184
Query: 142 GNALEGAVTDCKQC 155
G + A C C
Sbjct: 1185 G--VFPACHPCHTC 1196
Score = 99 (39.9 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 26/91 (28%), Positives = 38/91 (41%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----Q 154
C PC C+ C+ +G+C C+ GG C C ++G+ L+ DC
Sbjct: 1095 CQPCTCHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWGDPGLQCRACDCDPHGID 1154
Query: 155 CP-CPNQ-GPC-VQLDDDQVVCSECPRGYGG 182
P C G C + V C +C RG+ G
Sbjct: 1155 TPQCHRSTGHCSCRPGVSGVRCDQCARGFSG 1185
Score = 80 (33.2 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C+C+ G C+ CA G+YG G C+ C C +G
Sbjct: 804 QCVCKPAVVGRRCDHCAPGFYGFGPTG----CQACQCSPEG 840
Score = 61 (26.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ G C+RC RG +G C+ C C
Sbjct: 852 QCPCRTGAFGLRCDRCQRGQWG------FPSCQPCVC 882
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 205 (77.2 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 43/103 (41%), Positives = 56/103 (54%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNGHAD CD +G C+ C+D+TGG++CERC G++G+ C+ CPCP
Sbjct: 873 FPSCRPCVCNGHADECDTHTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP 932
Query: 159 NQGPCVQLD----------DDQVVCSECPRGYGG---EKMSPG 188
+GP Q Q+VC C GY G E +PG
Sbjct: 933 -EGPGSQRHFATSCHRDGYSQQIVC-HCRAGYTGLRCEACAPG 973
Score = 147 (56.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 54/207 (26%), Positives = 80/207 (38%)
Query: 5 CICQDNTGGDNCERCARGYYG----NALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
CIC+ NT G NCE+C Y+ A +G CK+C C D GN
Sbjct: 312 CICKHNTRGLNCEQCQDFYHDLPWHPAEDGHSHACKKCECHGHAHSCHFDMAIYLASGNV 371
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHAD--IC 115
+ R L R Y+ +PT C C+C+ G D C
Sbjct: 372 SGGVCDGCQHNTAGRHCELCRPFFYR------DPTKDLRDPGVCRSCDCDPMGSQDGGRC 425
Query: 116 DAE--------SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG------ 161
D SG+C C+++ G C++C G++G + A+ C++C C +G
Sbjct: 426 DPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDAL-GCQRCQCDTRGTVPGGT 484
Query: 162 PCVQLDDDQVVCSECPRGYGGEKMSPG 188
PC + + C G G + PG
Sbjct: 485 PCDR-NSGACFCKRLVTGRGCNRCLPG 510
Score = 133 (51.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 53/198 (26%), Positives = 79/198 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P--NQ--GPCVQLDDDQVSNLG 58
CQ NT G +CE C +Y + + + D C+ C C P +Q G C DD + +
Sbjct: 379 CQHNTAGRHCELCRPFFYRDPTKD-LRDPGVCRSCDCDPMGSQDGGRCDPHDDPALGLVS 437
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
+ R K + G+R + R + L+ + A C C C+ +
Sbjct: 438 GQCRC--KEHVVGSRCQQC---RDGFFGLS-------ASDALG-CQRCQCDTRGTVPGGT 484
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG---PCVQLDDDQ 170
CD SG C C+ G C RC G++G L + C+ C C G P Q
Sbjct: 485 PCDRNSGACFCKRLVTGRGCNRCLPGHWG--LSHDLLGCRPCDCDIGGALDPQCNEATGQ 542
Query: 171 VVCSECPRGYGGEKMSPG 188
C + G E++ PG
Sbjct: 543 CRCRQHMVGRCCEQVQPG 560
Score = 127 (49.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 32/99 (32%), Positives = 45/99 (45%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNG----HADICDAESGRCI-CQDNTGGDNCERCARGYYGN 143
G+ +P+ G RC PC C D CD SG+C+ C +T G +C C G++G
Sbjct: 973 GHFGDPSRPGG--RCQPCECGNIDPTDPDACDPHSGQCLRCLHHTEGPHCAHCKPGFHGQ 1030
Query: 144 ALEGAV---------TDCKQCPCPNQGPCVQLDDDQVVC 173
A + TD +QCP P++ C Q Q C
Sbjct: 1031 AARQSCHRCNCNLLGTDPQQCPSPDRCNCDQ-SSGQCPC 1068
Score = 116 (45.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ C+D+TGG++CERC G++G+ C+ CPCP +GP
Sbjct: 895 CLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP-EGP 935
Score = 98 (39.6 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 26/91 (28%), Positives = 38/91 (41%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----Q 154
C PC C+ C+ +G+C C+ GG C C ++G+ L+ DC
Sbjct: 1091 CQPCACHPSRSRGPTCNEFTGQCHCRTGFGGRTCSECQELHWGDPGLQCRACDCDPRGID 1150
Query: 155 CP-CPNQ-GPC-VQLDDDQVVCSECPRGYGG 182
P C G C + V C +C RG+ G
Sbjct: 1151 TPQCHRSTGHCSCRPGVSGVRCDQCARGFSG 1181
Score = 78 (32.5 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C+C+ G C CA GYYG G C+ C C +G
Sbjct: 803 QCLCKPAVVGRRCNICAPGYYGFGPTG----CQACQCSPEG 839
Score = 69 (29.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C C+ G CE CA G++G+ C+ C C N P
Sbjct: 956 CHCRAGYTGLRCEACAPGHFGDPSRPGGR-CQPCECGNIDP 995
Score = 63 (27.2 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
+C C+ G C+RC RG +G C+ C C G + D + LG R
Sbjct: 851 QCPCRTGAFGLRCDRCQRGQWG------FPSCRPCVC--NGHADECDTHTGTCLGCR 899
Score = 47 (21.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/70 (27%), Positives = 25/70 (35%)
Query: 91 HHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVT 150
HH T G C C H RC C N G + ++C N + +
Sbjct: 1013 HH--TEG---PHCAHCKPGFHGQAARQSCHRCNC--NLLGTDPQQCPSPDRCNCDQSS-- 1063
Query: 151 DCKQCPCPNQ 160
QCPC +Q
Sbjct: 1064 --GQCPCLSQ 1071
Score = 44 (20.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 61 TRIRIKSALGGNR---TRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDA 117
TR R + +G R T+ +A +Q +L+ H + G + V C G A +
Sbjct: 1365 TRHRTEVLMGAQREDFTQHMA-NQQALGELSARTHTLSLTG-INELV-CGSPGDAPCATS 1421
Query: 118 ESGRCICQDNTGGDNC 133
G C+D G C
Sbjct: 1422 PCGGAGCRDEDGQPRC 1437
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 102 RCVPCNCNGHADICDAESGR 121
RC +C+G A + D GR
Sbjct: 1436 RCGGLSCSGAAAMADLALGR 1455
Score = 38 (18.4 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 173 CSECPRGYGGEKMSPGAQ 190
C C G+ G+ PG +
Sbjct: 967 CEACAPGHFGDPSRPGGR 984
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 233 (87.1 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 63/196 (32%), Positives = 88/196 (44%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCP----NQGP-CVQLD----DDQ 53
C+ C+ NT G CE C G+ GN G + C+QC CP N P C+ +
Sbjct: 790 CLNCRHNTTGSRCELCKPGHVGNPSRGGELGACEQCECPSLDLNPNPECISTELAVLGSV 849
Query: 54 VSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD 113
SN N I GN+ Y G+ +P +G +C+ C CNG+ D
Sbjct: 850 ASNEDNYVCINCPLGYEGNKCE---------YCSDGFFEDPLTG----KCIECTCNGNID 896
Query: 114 I-----CDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQL 166
CD+E+G+C+ C +T GD+CE C ++GNA + CK C C QG Q
Sbjct: 897 PMGIGNCDSETGKCLKCIGHTTGDSCESCKEHHWGNA---QLHTCKPCGCHTQGAVNPQC 953
Query: 167 DDDQVVCSECPRGYGG 182
++ C EC Y G
Sbjct: 954 SEENGEC-ECKENYIG 968
Score = 186 (70.5 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 35/86 (40%), Positives = 48/86 (55%)
Query: 105 PCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQ 160
PC+C+GH+ C+ ++ C C+ NT GD CE C GY G+A EG C +C CP N
Sbjct: 1539 PCSCHGHSQTCNPDTSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCACPLVENS 1598
Query: 161 --GPCVQLDDDQ-VVCSECPRGYGGE 183
CV +D + VC+ C GY G+
Sbjct: 1599 FSDSCVAVDHGRGYVCNSCKPGYTGQ 1624
Score = 169 (64.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 59/175 (33%), Positives = 72/175 (41%)
Query: 4 RCI-CQDNTGGDNCERCARGYYG-NALEGAVTD-CKQCPCPNQGP----CVQLDDDQVSN 56
RC+ C NT G NCERC GYY + L D C+ C C G CV+ DDQ +
Sbjct: 386 RCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECDPVGSVSDACVR--DDQSAE 443
Query: 57 LGNRTRIRI-KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHA- 112
G + I K GG R A GY + PT C PC CN G
Sbjct: 444 NGQKPGDCICKPGFGGRRCERCA---------PGYRNHPT-------CEPCPCNRAGSVN 487
Query: 113 -DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQ 165
D CD S C C+ N G C+RC G + + C+ C C + C Q
Sbjct: 488 FDTCDGAS--CQCKANVEGIYCDRCKAGTIHLSASNPL-GCQPCFCFGHSSTCTQ 539
Score = 150 (57.9 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 102 RCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPN 159
RC C+C+G+++ CD +G C+ C+ NT G CE C G+ GN G + C+QC CP+
Sbjct: 770 RCEKCDCHGNSEECDPFTGECLNCRHNTTGSRCELCKPGHVGNPSRGGELGACEQCECPS 829
Score = 149 (57.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/158 (27%), Positives = 63/158 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+ NT GD CE C GY G+A EG C +C CP V N + + + +
Sbjct: 1559 CEHNTFGDFCEHCLPGYIGDAREGGANACTKCACP-----------LVENSFSDSCVAVD 1607
Query: 67 SALGG--NRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESGR 121
G N + + + GY+ +P G C PC+C+ + C+ SG+
Sbjct: 1608 HGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGG--TCSPCDCHPDGSLHGACNPLSGQ 1665
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQ-CPCP 158
C C+ G C C + + T C Q C P
Sbjct: 1666 CECKPGVTGRTCSMCQERHA--FINRVCTSCDQGCYLP 1701
Score = 136 (52.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
GY + TSG C C+ G D+ C+ +G+C+C+ G C+ C +YG EG
Sbjct: 1073 GYFNI-TSGDGCEDC-GCDPTGSEDVSCNLVTGQCVCKPGVTGLKCDSCLPNFYGLTSEG 1130
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
T+C+ CP P Q C +D V CP GE
Sbjct: 1131 C-TECEPCPAPGQ-VCDPIDGSCV----CPPNTVGE 1160
Score = 128 (50.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 48/166 (28%), Positives = 68/166 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALE------GAVTD-CKQCPCPNQGPCVQLDDDQVSNLGN 59
C + G CE C Y G + G V + C C C + G + D DQVS N
Sbjct: 953 CSEENG--ECE-CKENYIGAQCDRCKENHGDVENGCPACDCNDTGS-IGSDCDQVSGQCN 1008
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI----C 115
K + G + R +++ T +G C C+CN + I C
Sbjct: 1009 -----CKQGVFGKQCDQC---RPSYFNFTD------AG-----CQFCHCNIYGSIEDGKC 1049
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
D +G+C C++N G CE+CA GY+ N G C+ C C G
Sbjct: 1050 DQTTGKCECRENVEGTMCEKCADGYF-NITSG--DGCEDCGCDPTG 1092
Score = 126 (49.4 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 47/169 (27%), Positives = 71/169 (42%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+C NT G+ CE C NA + + CK C C + G D + N +
Sbjct: 1151 CVCPPNTVGEMCENCTT----NAWDYHPLNGCKLCDCSDIG-----SDGGMCNTFTG-QC 1200
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS---GGAFSRCVPCNCNGHADICDAESG 120
+ K+A G L TH G+ + PT G + P C +C+ E G
Sbjct: 1201 KCKAAYVG-----LKCDLCTH----GFFNFPTCEPCGCNAAGTDPLQCKDGQCLCN-EIG 1250
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQ-GPCVQLD 167
C C+ N G C++C G + +L+ + + C +C C N+ C Q D
Sbjct: 1251 ECPCKKNVHGTKCDQCGEGTF--SLDSSNLKGCTECFCFNRTSNCEQSD 1297
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 46/163 (28%), Positives = 62/163 (38%)
Query: 35 CKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALG-----GNRTRGLALTR--QTHYQL 87
C+QC C N DD+ N + T + G + T G R +Y+
Sbjct: 350 CQQCQCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRP 409
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICD---AESGR----CICQDNTGGDNCERCARGY 140
+G H C P A + D AE+G+ CIC+ GG CERCA GY
Sbjct: 410 SGLSHYREDACRTCECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGY 469
Query: 141 YGNALEGAVTDCKQCPCPNQGPCVQLDD-DQVVCSECPRGYGG 182
+ C+ CPC N+ V D D C +C G
Sbjct: 470 RNHPT------CEPCPC-NRAGSVNFDTCDGASC-QCKANVEG 504
Score = 111 (44.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/113 (34%), Positives = 46/113 (40%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNC----NGHADICDA-ESGR---C-ICQDNTGGDNCERCA 137
L GY + GGA + C C C N +D C A + GR C C+ G CE C
Sbjct: 1572 LPGYIGDAREGGA-NACTKCACPLVENSFSDSCVAVDHGRGYVCNSCKPGYTGQYCETCV 1630
Query: 138 RGYYGNALEGAVTDCKQCPC-PN---QGPCVQLDDDQVVCSECPRGYGGEKMS 186
GYYG+ T C C C P+ G C L C EC G G S
Sbjct: 1631 AGYYGDPQHIGGT-CSPCDCHPDGSLHGACNPLSGQ---C-ECKPGVTGRTCS 1678
Score = 110 (43.8 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 25/68 (36%), Positives = 32/68 (47%)
Query: 95 TSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCK 153
TS G + C PC G +CD G C+C NT G+ CE C + + L G CK
Sbjct: 1127 TSEGC-TECEPCPAPGQ--VCDPIDGSCVCPPNTVGEMCENCTTNAWDYHPLNG----CK 1179
Query: 154 QCPCPNQG 161
C C + G
Sbjct: 1180 LCDCSDIG 1187
Score = 97 (39.2 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 50
+C+C+ G C+ C +YG EG T+C+ CP P Q C +D
Sbjct: 1104 QCVCKPGVTGLKCDSCLPNFYGLTSEGC-TECEPCPAPGQ-VCDPID 1148
Score = 86 (35.3 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C++N G CE+CA GY+ N G C+ C C G
Sbjct: 1055 KCECRENVEGTMCEKCADGYF-NITSG--DGCEDCGCDPTG 1092
Score = 53 (23.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ G C++C Y+ G C+ C C
Sbjct: 1006 QCNCKQGVFGKQCDQCRPSYFNFTDAG----CQFCHC 1038
Score = 48 (22.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGN------ALEGAVTD---CK--QCPCPNQGPC 46
+C C+ G C+ C G++ A TD CK QC C G C
Sbjct: 1199 QCKCKAAYVGLKCDLCTHGFFNFPTCEPCGCNAAGTDPLQCKDGQCLCNEIGEC 1252
Score = 39 (18.8 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 173 CSECPRGYGG 182
C CP+GY G
Sbjct: 1497 CLGCPQGYTG 1506
Score = 35 (17.4 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 12 GGDNCERCARGYYG 25
G + C C +GY G
Sbjct: 1493 GVEKCLGCPQGYTG 1506
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 220 (82.5 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 46/109 (42%), Positives = 63/109 (57%)
Query: 93 EPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD 151
+P G F C PC CNGHA+ CD ++G C+ C+D+T G+ C+RCA G++GN G+
Sbjct: 842 QPGHWG-FPTCRPCQCNGHAEECDPQTGSCLRCRDHTDGERCQRCAAGHFGNPALGSGQH 900
Query: 152 CKQCPCPNQ--GP------CVQLDDD-QVVCSECPRGYGG---EKMSPG 188
C+ CPCP+ GP C Q QVVC C GY G ++ +PG
Sbjct: 901 CRPCPCPDGPGGPRHFAASCYQDGRSRQVVC-HCSPGYTGPRCDECAPG 948
Score = 196 (74.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 57/190 (30%), Positives = 83/190 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGN 59
RC+C+ +T G NCERC Y+ EG+ T+ C++C C D GN
Sbjct: 291 RCVCKHHTQGLNCERCEDFYHELPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGN 350
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCN--GHAD--I 114
T + N T G R+ H Y+ P S A + CVPC+C+ G D
Sbjct: 351 -TSGAVCDGCQHN-TMG----RRCHLCKPFYYRHPRSDIRAPTACVPCDCDPAGSLDGGA 404
Query: 115 CDAES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
CDA + G+C C++N G C+RC G YG + +G C++C C +G
Sbjct: 405 CDAHTDVALGMIAGQCRCKENVAGPRCDRCQHGAYGLS-QGDPQGCQRCLCDPRGTVADG 463
Query: 167 DDDQVVCSEC 176
+ +C
Sbjct: 464 SQCDPISGDC 473
Score = 144 (55.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 53/189 (28%), Positives = 73/189 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C G C+ CA GYYG+ L+ C+ C C N + D + + RT
Sbjct: 931 CHCSPGYTGPRCDECAPGYYGDPLQPG-GHCRPCQCHNN---IDTTDPEACD--RRTGQC 984
Query: 65 IKSALGGNRTRGLALTR-QTHYQLTGYHHE------PTSGGAFSRCVPCNCNGHADICDA 117
++ T G Q Y H T G + C P C CD
Sbjct: 985 LRCLYN---TAGPHCAECQPGYYGDAMRHSCRRCSCNTLGTDPNTCGPQQCQ-----CDQ 1036
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ---GP-CVQLDDDQVVC 173
SG+C C + G +C+RC+ ++ N G+ C+ C C Q P C Q C
Sbjct: 1037 RSGQCHCLPHVEGQSCDRCSPNFW-NL--GSGQGCEPCACHPQHSLSPACNQFTGQ---C 1090
Query: 174 SECPRGYGG 182
S C G+GG
Sbjct: 1091 S-CRPGFGG 1098
Score = 128 (50.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 28/93 (30%), Positives = 40/93 (43%)
Query: 103 CVPCNCNGHAD---ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-- 157
C PC C+G +CD +G+C C+ G C+RC G++G C+ C C
Sbjct: 805 CRPCQCSGEGSLSAVCDTITGQCPCRQGAHGSRCDRCQPGHWG------FPTCRPCQCNG 858
Query: 158 ------PNQGPCVQLDD--DQVVCSECPRGYGG 182
P G C++ D D C C G+ G
Sbjct: 859 HAEECDPQTGSCLRCRDHTDGERCQRCAAGHFG 891
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 52/203 (25%), Positives = 76/203 (37%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G C+RC G++G C+ C C G + D S L
Sbjct: 826 QCPCRQGAHGSRCDRCQPGHWG------FPTCRPCQC--NGHAEECDPQTGSCL------ 871
Query: 64 RIKSALGGNRTRGLALTRQTHYQL-TGYHHEPT---SGGAFSRCVPCNCNGHADICDAES 119
R + G R + A + L +G H P G R +C D S
Sbjct: 872 RCRDHTDGERCQRCAAGHFGNPALGSGQHCRPCPCPDGPGGPRHFAASCYQ-----DGRS 926
Query: 120 GRCICQDNTG--GDNCERCARGYYGNALEGAVTDCKQCPCPNQ-------------GPCV 164
+ +C + G G C+ CA GYYG+ L+ C+ C C N G C+
Sbjct: 927 RQVVCHCSPGYTGPRCDECAPGYYGDPLQPG-GHCRPCQCHNNIDTTDPEACDRRTGQCL 985
Query: 165 QL--DDDQVVCSECPRGYGGEKM 185
+ + C+EC GY G+ M
Sbjct: 986 RCLYNTAGPHCAECQPGYYGDAM 1008
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 52/192 (27%), Positives = 72/192 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEG--AVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
CQ NT G C C YY + A T C C C P LD T +
Sbjct: 359 CQHNTMGRRCHLCKPFYYRHPRSDIRAPTACVPCDCD---PAGSLDGGACDA---HTDVA 412
Query: 65 IKSALGGNRTR-GLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-AD--ICDAESG 120
+ G R + +A R Q Y RC+ C+ G AD CD SG
Sbjct: 413 LGMIAGQCRCKENVAGPRCDRCQHGAYGLSQGDPQGCQRCL-CDPRGTVADGSQCDPISG 471
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP----CVQLDDDQVVCSEC 176
C+C+ G +C++C ++ AL + C+ C C G C ++ Q C
Sbjct: 472 DCLCKRLVTGRSCDQCLPEHW--ALSHDLPGCQPCECDVGGAHDNQCA-METGQCRCRSH 528
Query: 177 PRGYGGEKMSPG 188
G E++ PG
Sbjct: 529 IVGRQCEQVEPG 540
Score = 107 (42.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/93 (27%), Positives = 42/93 (45%)
Query: 104 VPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
+PC C+ + C + G+C C+ N G C RC+ G +G G C+ C C +
Sbjct: 758 LPCLCDPQGLLSAECQPQGGQCRCKPNVVGRRCHRCSPGTFGFGPGG----CRPCQCSGE 813
Query: 161 GPCVQLDDDQVVCSECP--RGYGG---EKMSPG 188
G + D + +CP +G G ++ PG
Sbjct: 814 GSLSAVCD--TITGQCPCRQGAHGSRCDRCQPG 844
Score = 57 (25.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C+C+ G +C++C ++ AL + C+ C C
Sbjct: 473 CLCKRLVTGRSCDQCLPEHW--ALSHDLPGCQPCEC 506
Score = 54 (24.1 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 19/56 (33%), Positives = 23/56 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEG-------------AVTDC--KQCPCPNQG 44
+C C+ N G C RC+ G +G G AV D QCPC QG
Sbjct: 778 QCRCKPNVVGRRCHRCSPGTFGFGPGGCRPCQCSGEGSLSAVCDTITGQCPC-RQG 832
Score = 45 (20.9 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C+ + G CE+ G+Y
Sbjct: 522 QCRCRSHIVGRQCEQVEPGFY 542
Score = 35 (17.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEKMSPGAQ 190
N+ C D V C+E P G G + GA+
Sbjct: 1381 NKKVCGAAGD--VPCAESPCGGAGCRDEDGAR 1410
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 229 (85.7 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 65/194 (33%), Positives = 81/194 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT GD+CERC G+ E C CPCP P + G RT+
Sbjct: 1840 CIGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISCPCPLAVPSNNFATGCILR-GGRTQC 1898
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDA 117
K G A G+ P G S C PC+C+G+ D CD
Sbjct: 1899 LCKPGYAGASCERCA---------PGFFGNPLVLG--SSCQPCDCSGNGDPNMLFSDCDP 1947
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNAL-EGAVTDCKQCPC------PNQGPCV-QLDD 168
+G C C +T G CE CA G+YGNAL G T C PC P+ G C+ +
Sbjct: 1948 LTGTCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSPCGTEACDPHSGHCLCKAGV 2007
Query: 169 DQVVCSECPRGYGG 182
+ C C G+ G
Sbjct: 2008 TGLRCDRCQEGHFG 2021
Score = 198 (74.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 44/111 (39%), Positives = 55/111 (49%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + G RC+PC C+GH+D C SG CI CQ NT GD+CERC G+ E
Sbjct: 1808 GYYRD-VKGLFLGRCIPCQCHGHSDRCLPGSGVCIGCQHNTEGDHCERCQAGFVRTGSED 1866
Query: 148 AVTDCKQCPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
C CPCP P C+ L + C C GY G E+ +PG
Sbjct: 1867 PAAPCISCPCPLAVPSNNFATGCI-LRGGRTQCL-CKPGYAGASCERCAPG 1915
Score = 170 (64.9 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 52/188 (27%), Positives = 76/188 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+ G +CERCA G++GN L + C+ C C G L D L R
Sbjct: 1897 QCLCKPGYAGASCERCAPGFFGNPLVLG-SSCQPCDCSGNGDPNMLFSD-CDPLTGTCRG 1954
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
++ G R A G++ G +RC C+ G + CD SG C+
Sbjct: 1955 CLRHTTGP-RCESCA---------PGFYGNALLPGNCTRC-DCSPCG-TEACDPHSGHCL 2002
Query: 124 CQDNTGGDNCERCARGYYG-NALEGA-------VTDCKQCPCPNQGPC-VQLDDDQVVCS 174
C+ G C+RC G++G EG + +C P G C + C
Sbjct: 2003 CKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAAESSECH-PQSGQCHCRPGTGGPQCR 2061
Query: 175 ECPRGYGG 182
EC G+ G
Sbjct: 2062 ECAPGHWG 2069
Score = 160 (61.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 57/200 (28%), Positives = 80/200 (40%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
CI CQ +T G NCE+C G+Y + L+ C++C C + D +L R
Sbjct: 375 CIDCQHHTTGINCEQCLPGFYRSPDHPLDSPHA-CRRCNCESD-----FTDGTCEDLTGR 428
Query: 61 TRIRIKSALGGNRTRGLA--LTRQTH-YQLTGYHHEPTSGGAF--SRCVPCNCNG---HA 112
R G R A T H Y + H T V C+C+
Sbjct: 429 CYCRPNFT--GARCDACAEGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVNCDCSAAGTQG 486
Query: 113 DIC--DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN--QGPCVQLDD 168
+ C D + G C+C+ N G +CE CA G+YG + C QC P G C + D
Sbjct: 487 NACRKDPQVGHCVCKPNFQGTHCELCAPGFYGPGCQ----PC-QCSSPGVVDGTCDR-DS 540
Query: 169 DQVVCSECPRGYGGEKMSPG 188
Q C G ++ +PG
Sbjct: 541 GQCTCRTGFEGAACDRCAPG 560
Score = 149 (57.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 56/190 (29%), Positives = 78/190 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC-PCPNQGPCVQLDDDQVSNLGNRTR 62
RC C+ N G C+ CA G+ TD C P P+ +QV G+
Sbjct: 428 RCYCRPNFTGARCDACAEGF---------TDFPHCYPVPSSSH--NDTGEQVLPAGHIVN 476
Query: 63 IRIKSA-LGGNRTR-----GLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHAD 113
+A GN R G + + ++Q G H E + G + C PC C+ G D
Sbjct: 477 CDCSAAGTQGNACRKDPQVGHCVCKP-NFQ--GTHCELCAPGFYGPGCQPCQCSSPGVVD 533
Query: 114 -ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
CD +SG+C C+ G C+RCA GY+ L C+ C C G + DD
Sbjct: 534 GTCDRDSGQCTCRTGFEGAACDRCAPGYFHFPL------CQLCGCSPVGTLPEGCDDAGR 587
Query: 173 CSECPRGYGG 182
C C + G
Sbjct: 588 CL-CRPEFNG 596
Score = 145 (56.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 46/155 (29%), Positives = 66/155 (42%)
Query: 2 FR-RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQG-PCVQLDDDQVS 55
FR +C CQ NT G +C+RC G+ A TD C+ C C C D +V
Sbjct: 300 FRLQCACQHNTCGGSCDRCCPGFNQQPWRPATTDSANECQSCNCYGHAHDCYY--DPEVD 357
Query: 56 NLGNRTRIRIKSALGGNRTRGLALTRQTHYQ-------LTGYHHEPTSG-GAFSRCVPCN 107
N ++ + + GG G+ + Q H L G++ P + C CN
Sbjct: 358 RR-NASQNQDQVYQGG----GVCIDCQHHTTGINCEQCLPGFYRSPDHPLDSPHACRRCN 412
Query: 108 CNGH-AD-ICDAESGRCICQDNTGGDNCERCARGY 140
C D C+ +GRC C+ N G C+ CA G+
Sbjct: 413 CESDFTDGTCEDLTGRCYCRPNFTGARCDACAEGF 447
Score = 144 (55.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 103 CVPCNCNGHADI--CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
C PC C A+ C +SG+C C+ TGG C CA G++G +G C++C C
Sbjct: 2028 CRPCACGPAAESSECHPQSGQCHCRPGTGGPQCRECAPGHWGLPEQG----CRRCQCQG- 2082
Query: 161 GPCVQLDDDQVVCSECPRGYGGEK 184
G C L + C+ CP G GGE+
Sbjct: 2083 GHC-DLHTGR--CT-CPPGLGGER 2102
Score = 137 (53.3 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 40/121 (33%), Positives = 59/121 (48%)
Query: 50 DDDQVSNLGNRTRIRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC 106
D + +N+ R +R + LG G R +TR+ +Y + + + GG RCV
Sbjct: 234 DFTKATNIRLRF-LRTNTLLGHLMGKALRDPTVTRRYYYSIK----DISIGG---RCV-- 283
Query: 107 NCNGHADICDAESG------RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCP 156
C+GHAD+CDA+ +C CQ NT G +C+RC G+ A TD C+ C
Sbjct: 284 -CHGHADVCDAKDPTDPFRLQCACQHNTCGGSCDRCCPGFNQQPWRPATTDSANECQSCN 342
Query: 157 C 157
C
Sbjct: 343 C 343
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 100 FSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
F C C C+ + CD ++GRC+C+ G +C+RC GY+G +C C
Sbjct: 564 FPLCQLCGCSPVGTLPEGCD-DAGRCLCRPEFNGPHCDRCRLGYHG------YPECHACA 616
Query: 157 CPNQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
C +G QL +C C GY G ++ SPG
Sbjct: 617 CDPRGSVDQLCGAGGLC-RCCSGYAGSTCQECSPG 650
Score = 120 (47.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 29/86 (33%), Positives = 38/86 (44%)
Query: 103 CVPCNCNGHA-----D-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+G D CDA+SG+C C+ N G C+ CA G++G C+ C
Sbjct: 1490 CEECNCSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHG------FPSCRPCD 1543
Query: 157 CPNQGPCVQLDDD---QVVCSECPRG 179
C G D Q C E +G
Sbjct: 1544 CHEAGSAPGTCDPLTGQCYCKENVQG 1569
Score = 111 (44.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 27/99 (27%), Positives = 40/99 (40%)
Query: 100 FSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYY-------GNALEGAV 149
F C PC+C+ + CD SG+C C+ G C+ C G Y G+ +
Sbjct: 654 FPDCAPCHCSPEGSLHAACDPHSGQCSCRPRVTGLRCDMCVPGAYNFPYCEAGSCHPAGL 713
Query: 150 TDCKQCPCPNQGPCV-QLDDDQVVCSECPRGYGGEKMSP 187
+ P Q PC + + C C G+ G +SP
Sbjct: 714 APADRVPPEAQAPCTCRAHVEGPSCDRCKPGFWG--LSP 750
Score = 108 (43.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 29/96 (30%), Positives = 41/96 (42%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCP 158
F C PC+C+G +CD +G+CIC T +C C +G + L G C++C C
Sbjct: 1443 FPSCRPCDCSGR--LCDELTGQCICPPRTIPPDCLVCQPQTFGCHPLVG----CEECNCS 1496
Query: 159 NQG------PCVQLDDDQVVCSECPRGYGGEKMSPG 188
G P D Q C G + +PG
Sbjct: 1497 GPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPG 1532
Score = 108 (43.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 30/101 (29%), Positives = 43/101 (42%)
Query: 89 GYHHEPTSGGAFSRCV-------------PCNCN---GHADICDAESGRCICQDNTGGDN 132
GYH P+S AF R PC C+ + C+ G+C C+ + G +
Sbjct: 1373 GYHISPSSSSAFCRSAATSLSLFYNNGARPCGCHEVGAMSPTCEPFGGQCPCRAHVIGRD 1432
Query: 133 CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
C RCA GY+G C+ C C + C +L Q +C
Sbjct: 1433 CSRCATGYWG------FPSCRPCDCSGR-LCDELTG-QCIC 1465
Score = 107 (42.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 100 FSRCVPCNCN--GHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQC 155
F C PC+C+ G A CD +G+C C++N G C++C G + +L+ A C +C
Sbjct: 1536 FPSCRPCDCHEAGSAPGTCDPLTGQCYCKENVQGPRCDQCRLGTF--SLDAANPKGCTRC 1593
Query: 156 PC 157
C
Sbjct: 1594 FC 1595
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 103 CVPCNCN-----GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCP 156
C CNC+ G A C +G+C C+ + G C C G++G L+ A C+ C
Sbjct: 756 CTRCNCDPRGTLGGAAQCQLGNGQCFCKPHVCGQTCAACKDGFFG--LDQADYFGCRSCR 813
Query: 157 CPNQGPCVQLDDDQVVCSECPRGYGGEKMSPGAQ 190
C G Q + + C G S AQ
Sbjct: 814 CDVGGALGQSCELRTGACMCRPNTQGSTCSEPAQ 847
Score = 91 (37.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 103 CVPCNCNG-HADICDAESGRCICQDNTGGDNCERCA 137
C C C G H CD +GRC C GG+ CE C+
Sbjct: 2075 CRRCQCQGGH---CDLHTGRCTCPPGLGGERCETCS 2107
Score = 89 (36.4 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCV--QLDDDQV 171
C+C N GD+C+ CA GYY + + C C C P G C+ Q + +
Sbjct: 1791 CMCPANYLGDSCQECAPGYYRDVKGLFLGRCIPCQCHGHSDRCLPGSGVCIGCQHNTEGD 1850
Query: 172 VCSECPRGY 180
C C G+
Sbjct: 1851 HCERCQAGF 1859
Score = 85 (35.0 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
RC+C+ G +C+RC GY+G +C C C +G QL
Sbjct: 587 RCLCRPEFNGPHCDRCRLGYHG------YPECHACACDPRGSVDQL 626
Score = 79 (32.9 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C+C N GD+C+ CA GYY + + C C C
Sbjct: 1791 CMCPANYLGDSCQECAPGYYRDVKGLFLGRCIPCQC 1826
Score = 73 (30.8 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C+ CA G++G C+ C C G
Sbjct: 1514 QCKCRPNVAGRRCDTCAPGFHG------FPSCRPCDCHEAG 1548
Score = 70 (29.7 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ + G +C RCA GY+G C+ C C
Sbjct: 1421 QCPCRAHVIGRDCSRCATGYWG------FPSCRPCDC 1451
Score = 69 (29.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 24/92 (26%), Positives = 36/92 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C C+ + G C C G++G L+ A C+ C C G LG
Sbjct: 779 QCFCKPHVCGQTCAACKDGFFG--LDQADYFGCRSCRCDVGGA-----------LGQSCE 825
Query: 63 IRIKSALGGNRTRGLALTR--QTHYQLTGYHH 92
+R + + T+G + Q HY L HH
Sbjct: 826 LRTGACMCRPNTQGSTCSEPAQDHY-LPDLHH 856
Score = 65 (27.9 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C++N G C++C G + +L+ A C +C C
Sbjct: 1560 QCYCKENVQGPRCDQCRLGTF--SLDAANPKGCTRCFC 1595
Score = 54 (24.1 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 4 RCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQGPCVQ 48
+CIC T +C C +G + L G C++C C GP VQ
Sbjct: 1462 QCICPPRTIPPDCLVCQPQTFGCHPLVG----CEECNC--SGPGVQ 1501
Score = 48 (22.0 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 12/50 (24%), Positives = 18/50 (36%)
Query: 4 RCICQDNTGGDNCERCARGYY-------GNALEGAVTDCKQCPCPNQGPC 46
+C C+ G C+ C G Y G+ + + P Q PC
Sbjct: 678 QCSCRPRVTGLRCDMCVPGAYNFPYCEAGSCHPAGLAPADRVPPEAQAPC 727
Score = 42 (19.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
QCPC + + D CS C GY G
Sbjct: 1421 QCPC--RAHVIGRD-----CSRCATGYWG 1442
Score = 36 (17.7 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 174 SECPRGYG 181
S CP GYG
Sbjct: 1297 SFCPHGYG 1304
Score = 35 (17.4 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 6/13 (46%), Positives = 6/13 (46%)
Query: 103 CVPCNCNGHADIC 115
C C C G D C
Sbjct: 1590 CTRCFCFGATDRC 1602
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 249 (92.7 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 69/199 (34%), Positives = 94/199 (47%)
Query: 4 RCICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPCPNQGPCVQLD-------DDQV 54
+CIC G +CE CA GY G L + C++C C G Q D D Q
Sbjct: 921 QCICPPGYVGTSCEDCAPGYSRTGGGLYLGL--CEKCEC--NGHASQCDKEYGYCLDCQH 976
Query: 55 SNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI 114
+ G++ R K G+ RG T +P + A PC+CN H+
Sbjct: 977 NTEGDQCE-RCKPGFVGDARRG-----------TPNDCQPEATRA-----PCHCNNHSPR 1019
Query: 115 -CDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
CD+ GRC+ C+ NT G +CERC +GYYG+A +G+ DC CPCP C ++ QV
Sbjct: 1020 GCDS-FGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDCYLDNEGQVA 1078
Query: 173 CSECPRGYGGE---KMSPG 188
C CP G G + +PG
Sbjct: 1079 CRICPAGLQGRLCNECAPG 1097
Score = 156 (60.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 2 FRRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVS 55
F RC+ C+ NT G +CERC +GYYG+A +G+ DC CPCP C ++ QV+
Sbjct: 1024 FGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDCYLDNEGQVA 1078
Score = 154 (59.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 45/140 (32%), Positives = 59/140 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT GD CERC G+ G+A G DC+ P + PC ++ + R
Sbjct: 971 CLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQ--PEATRAPC-HCNNHSPRGCDSFGRC 1027
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR-- 121
L + T G R GY+ + T G + C PC C G +D G+
Sbjct: 1028 ----LLCEHNTEGTHCERCKK----GYYGDATKGSPYD-CTPCPCPGASDCYLDNEGQVA 1078
Query: 122 C-ICQDNTGGDNCERCARGY 140
C IC G C CA GY
Sbjct: 1079 CRICPAGLQGRLCNECAPGY 1098
Score = 51 (23.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCE 134
C +CN + + ES +C+C T G CE
Sbjct: 2754 CHDESCNTGICLDNEESWQCVCPLGTTGLRCE 2785
Score = 36 (17.7 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 136 CARGYYGNALEGAVT 150
C + GN +EG VT
Sbjct: 2329 CKVSFDGNVVEGFVT 2343
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 249 (92.7 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 69/199 (34%), Positives = 94/199 (47%)
Query: 4 RCICQDNTGGDNCERCARGYY--GNALEGAVTDCKQCPCPNQGPCVQLD-------DDQV 54
+CIC G +CE CA GY G L + C++C C G Q D D Q
Sbjct: 921 QCICPPGYVGTSCEDCAPGYSRTGGGLYLGL--CEKCEC--NGHASQCDKEYGYCLDCQH 976
Query: 55 SNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI 114
+ G++ R K G+ RG T +P + A PC+CN H+
Sbjct: 977 NTEGDQCE-RCKPGFVGDARRG-----------TPNDCQPEATRA-----PCHCNNHSPR 1019
Query: 115 -CDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
CD+ GRC+ C+ NT G +CERC +GYYG+A +G+ DC CPCP C ++ QV
Sbjct: 1020 GCDS-FGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDCYLDNEGQVA 1078
Query: 173 CSECPRGYGGE---KMSPG 188
C CP G G + +PG
Sbjct: 1079 CRICPAGLQGRLCNECAPG 1097
Score = 156 (60.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 2 FRRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVS 55
F RC+ C+ NT G +CERC +GYYG+A +G+ DC CPCP C ++ QV+
Sbjct: 1024 FGRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGASDCYLDNEGQVA 1078
Score = 154 (59.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 45/140 (32%), Positives = 59/140 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT GD CERC G+ G+A G DC+ P + PC ++ + R
Sbjct: 971 CLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQ--PEATRAPC-HCNNHSPRGCDSFGRC 1027
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR-- 121
L + T G R GY+ + T G + C PC C G +D G+
Sbjct: 1028 ----LLCEHNTEGTHCERCKK----GYYGDATKGSPYD-CTPCPCPGASDCYLDNEGQVA 1078
Query: 122 C-ICQDNTGGDNCERCARGY 140
C IC G C CA GY
Sbjct: 1079 CRICPAGLQGRLCNECAPGY 1098
Score = 51 (23.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 103 CVPCNCNGHADICDAESGRCICQDNTGGDNCE 134
C +CN + + ES +C+C T G CE
Sbjct: 2754 CHDESCNTGICLDNEESWQCVCPLGTTGLRCE 2785
Score = 36 (17.7 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 136 CARGYYGNALEGAVT 150
C + GN +EG VT
Sbjct: 2329 CKVSFDGNVVEGFVT 2343
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 235 (87.8 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 67/202 (33%), Positives = 85/202 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT GD CERC G+ + + C CPCP P D V G RT+
Sbjct: 1881 CVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLAVPSNNFADGCVLRNG-RTQC 1939
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDA 117
+ G A G+ P G S C PC+C+G+ D CD
Sbjct: 1940 LCRPGYAGASCERCA---------PGFFGNPLVLG--SSCQPCDCSGNGDPNMIFSDCDP 1988
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNAL-EGAVTDCKQCPC------PNQGPCV-QLDD 168
+G C C +T G +CERCA G+YGNAL G T C PC P G C+ +
Sbjct: 1989 LTGACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSPCGTETCDPQSGRCLCKAGV 2048
Query: 169 DQVVCSECPRGYGGEKMSPGAQ 190
C C GY G + G +
Sbjct: 2049 TGQRCDRCLEGYFGFEQCQGCR 2070
Score = 201 (75.8 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 45/111 (40%), Positives = 57/111 (51%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + T G RCVPC C+GH+D C SG C+ CQ NT GD CERC G+ +
Sbjct: 1849 GYYRD-TKGLFLGRCVPCQCHGHSDRCLPGSGICVGCQHNTEGDQCERCRPGFVSSDPSN 1907
Query: 148 AVTDCKQCPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C CPCP P CV L + + C C GY G E+ +PG
Sbjct: 1908 PASPCVSCPCPLAVPSNNFADGCV-LRNGRTQCL-CRPGYAGASCERCAPG 1956
Score = 187 (70.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 55/187 (29%), Positives = 78/187 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+ G +CERCA G++GN L + C+ C C G + D L R
Sbjct: 1938 QCLCRPGYAGASCERCAPGFFGNPLVLG-SSCQPCDCSGNGDPNMIFSD-CDPLTGACRG 1995
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
++ G + R G++ G +RC C+ G + CD +SGRC+
Sbjct: 1996 CLRHTTGPHCERCAP----------GFYGNALLPGNCTRC-DCSPCG-TETCDPQSGRCL 2043
Query: 124 CQDNTGGDNCERCARGYYG-NALEGA-VTDC----KQCPC-PNQGPC-VQLDDDQVVCSE 175
C+ G C+RC GY+G +G C K C P G C Q C E
Sbjct: 2044 CKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSECHPQSGQCHCQPGTTGPQCLE 2103
Query: 176 CPRGYGG 182
C GY G
Sbjct: 2104 CAPGYWG 2110
Score = 163 (62.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 61/196 (31%), Positives = 82/196 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC-PCPNQGPCVQLDDDQVSNLGNRTR 62
RC C+ N G+ C CA GY TD C P P+ P + QV G
Sbjct: 451 RCYCRPNFTGELCAACAEGY---------TDFPHCYPLPSF-PHNDTRE-QVLPAGQIVN 499
Query: 63 IRIKSA-LGGNRTR-GLALTRQT-HYQLTGYHHEPTSGGAFS-RCVPCNCN--GHAD-IC 115
+A GN R L R G H E + G C PC C+ G A+ +C
Sbjct: 500 CDCNAAGTQGNACRKDPRLGRCVCKPNFRGAHCELCAPGFHGPSCHPCQCSSPGVANSLC 559
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSE 175
D ESG+C+C+ GD C+ CA GY+ L C+ C C G + D+ C +
Sbjct: 560 DPESGQCMCRTGFEGDRCDHCALGYFHFPL------CQLCGCSPAGTLPEGCDEAGRC-Q 612
Query: 176 CPRGYGG---EKMSPG 188
C G+ G ++ PG
Sbjct: 613 CRPGFDGPHCDRCLPG 628
Score = 151 (58.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 50/157 (31%), Positives = 67/157 (42%)
Query: 2 FR-RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQG-PCVQLDDDQVS 55
FR +C CQ NT G +C+RC G+ + A TD C+ C C C D +V
Sbjct: 323 FRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYY--DPEVD 380
Query: 56 NLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR----------CVP 105
N ++ + GG G+ L Q H TG + E G F C P
Sbjct: 381 RR-NASQNQDNVYQGG----GVCLDCQHH--TTGINCERCLPGFFRAPDQPLDSPHVCRP 433
Query: 106 CNCNGH-AD-ICDAESGRCICQDNTGGDNCERCARGY 140
C+C D C+ +GRC C+ N G+ C CA GY
Sbjct: 434 CDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGY 470
Score = 144 (55.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 34/90 (37%), Positives = 44/90 (48%)
Query: 103 CVPCNCNGHA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
C PC C A C +SG+C CQ T G C CA GY+G +G C++C CP +
Sbjct: 2069 CRPCACGPAAKGSECHPQSGQCHCQPGTTGPQCLECAPGYWGLPEKG----CRRCQCP-R 2123
Query: 161 GPCVQLDDDQVVCSECPRGYGGEKMSPGAQ 190
G C D C+ CP G GE+ +Q
Sbjct: 2124 GHC---DPHTGHCT-CPPGLSGERCDTCSQ 2149
Score = 138 (53.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 40/121 (33%), Positives = 60/121 (49%)
Query: 50 DDDQVSNLGNRTRIRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC 106
D + +N+ R +R + LG G R +TR+ +Y + + + GG RCV
Sbjct: 257 DFTKATNIRLRF-LRTNTLLGHLMGKALRDPTVTRRYYYSIK----DISIGG---RCV-- 306
Query: 107 NCNGHADICDAESG------RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCP 156
C+GHAD+CDA+ +C CQ NT G +C+RC G+ + A TD C+ C
Sbjct: 307 -CHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCN 365
Query: 157 C 157
C
Sbjct: 366 C 366
Score = 123 (48.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 29/86 (33%), Positives = 38/86 (44%)
Query: 103 CVPCNCNGHA-----D-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+G D CD +SG+C C+ N G C+ CA G+YG C+ C
Sbjct: 1530 CEECNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGFYG------YPSCRPCD 1583
Query: 157 CPNQGPCVQLDDD---QVVCSECPRG 179
C G + D Q C E +G
Sbjct: 1584 CHEAGTMASVCDPLTGQCHCKENVQG 1609
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 41/122 (33%), Positives = 52/122 (42%)
Query: 73 RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESGRCICQDNTG 129
RT G R H L GY H P C C C+ + CD E+GRC C+
Sbjct: 569 RT-GFEGDRCDHCAL-GYFHFPL-------CQLCGCSPAGTLPEGCD-EAGRCQCRPGFD 618
Query: 130 GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG---EKMS 186
G +C+RC GY+G DC C C +G Q +C C GY G ++ S
Sbjct: 619 GPHCDRCLPGYHG------YPDCHACACDPRGALDQQCGVGGLC-HCRPGYTGATCQECS 671
Query: 187 PG 188
PG
Sbjct: 672 PG 673
Score = 110 (43.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 35 CKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEP 94
C++C C GP VQ D ++ + + R + + G R A G++ P
Sbjct: 1530 CEECNC--SGPGVQELTDPTCDMDSG-QCRCRPNVAGRRCDTCA---------PGFYGYP 1577
Query: 95 TSGGAFSRCVPCNCN--GH-ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VT 150
+ C PC+C+ G A +CD +G+C C++N G C++C G + +L+ A
Sbjct: 1578 S-------CRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQCRVGTF--SLDAANPK 1628
Query: 151 DCKQCPC 157
C +C C
Sbjct: 1629 GCTRCFC 1635
Score = 107 (42.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 29/96 (30%), Positives = 41/96 (42%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCP 158
F C PC+C A +CD +G+CIC T +C C +G + L G C++C C
Sbjct: 1483 FPNCRPCDCG--ARLCDELTGQCICPPRTVPPDCLVCQPQSFGCHPLVG----CEECNCS 1536
Query: 159 NQG------PCVQLDDDQVVCSECPRGYGGEKMSPG 188
G P +D Q C G + +PG
Sbjct: 1537 GPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPG 1572
Score = 107 (42.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 83 THYQLTGYHHEPTSGGAFSR-------------CVPCNCNGHADI---CDAESGRCICQD 126
+H GYH P+S F R +PC C+ + C+ G+C C+
Sbjct: 1407 SHCATQGYHISPSSSSPFCRNAATSLSLFYNNGALPCGCHEVGAVSPTCEPFGGQCPCRG 1466
Query: 127 NTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+ G +C RCA GY+G +C+ C C + C +L Q +C
Sbjct: 1467 HVIGRDCSRCATGYWG------FPNCRPCDCGAR-LCDELTG-QCIC 1505
Score = 91 (37.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCV--QLDDDQV 171
C+C N GD+C+ CA GYY + + C C C P G CV Q + +
Sbjct: 1832 CMCPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQCHGHSDRCLPGSGICVGCQHNTEGD 1891
Query: 172 VCSECPRGY 180
C C G+
Sbjct: 1892 QCERCRPGF 1900
Score = 82 (33.9 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C+C N GD+C+ CA GYY + + C C C
Sbjct: 1832 CMCPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQC 1867
Score = 82 (33.9 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 33/121 (27%), Positives = 42/121 (34%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC C+ G +C+RC GY+G DC C C +G DQ +G
Sbjct: 610 RCQCRPGFDGPHCDRCLPGYHG------YPDCHACACDPRGAL-----DQQCGVGGLCHC 658
Query: 64 RIKSALGGNRTR------GLALTRQTHYQLTGYHH---EPTSGGAFSRCVPCNCNGHADI 114
R G G H G H +PT+G RC P H D+
Sbjct: 659 R-PGYTGATCQECSPGFYGFPSCIPCHCSADGSLHTTCDPTTGQC--RCRPRVTGLHCDM 715
Query: 115 C 115
C
Sbjct: 716 C 716
Score = 81 (33.6 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C+C+ + G +C+RC GY+G + C +C C +G
Sbjct: 750 CMCRAHVEGPSCDRCKPGYWGLSASNP-EGCTRCSCDPRG 788
Score = 80 (33.2 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
+C C+ N G C+ CA G+YG C+ C C G + D
Sbjct: 1554 QCRCRPNVAGRRCDTCAPGFYG------YPSCRPCDCHEAGTMASVCD 1595
Score = 72 (30.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ + G +C RCA GY+G +C+ C C
Sbjct: 1461 QCPCRGHVIGRDCSRCATGYWG------FPNCRPCDC 1491
Score = 63 (27.2 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C++N G C++C G + +L+ A C +C C
Sbjct: 1600 QCHCKENVQGSRCDQCRVGTF--SLDAANPKGCTRCFC 1635
Score = 62 (26.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C+ + G C C G++G L+ A C+ C C
Sbjct: 801 QCFCKAHVCGKTCAACKDGFFG--LDYADYFGCRSCRC 836
Score = 49 (22.3 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 5 CICQDNTGGDNCERCARGYY 24
C C+ NT G C A+ +Y
Sbjct: 853 CRCRPNTQGPTCSEPAKDHY 872
Score = 48 (22.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
QCPC +G + D CS C GY G
Sbjct: 1461 QCPC--RGHVIGRD-----CSRCATGYWG 1482
Score = 45 (20.9 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C+ G +C+ C G Y
Sbjct: 701 QCRCRPRVTGLHCDMCVPGAY 721
Score = 36 (17.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 174 SECPRGYG 181
S CP GYG
Sbjct: 1337 SFCPHGYG 1344
Score = 35 (17.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 146 EGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE-KMSPG 188
EG ++ C C +Q + + RG+G ++PG
Sbjct: 956 EGKLSSCTNCTEQSQPVAFPPSTEPAFVTVPQRGFGEPFVLNPG 999
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 198 (74.8 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 43/103 (41%), Positives = 56/103 (54%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC C+GHAD CD +G C+ C+D+TGG++CERC G++G+ C+ CPCP
Sbjct: 875 FPSCRPCVCHGHADECDPNTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP 934
Query: 159 NQGP------CVQLDDD----QVVCSECPRGYGG---EKMSPG 188
+GP D QVVC C GY G E +PG
Sbjct: 935 -EGPGSRRHFATSCHRDGYSQQVVC-HCRAGYTGLRCEACAPG 975
Score = 191 (72.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 53/167 (31%), Positives = 76/167 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C+D+TGG++CERC G++G+ C+ CPCP +GP G+R
Sbjct: 897 CLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP-EGP------------GSRRHF 943
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SR----CVPCNCNGHAD--- 113
G + + R + TG E + G F SR C PC C+G+ D
Sbjct: 944 ATSCHRDGYSQQVVCHCRAGY---TGLRCEACAPGHFGDPSRPGGGCQPCECSGNIDPTD 1000
Query: 114 --ICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
CD SG+C+ C +T G C C G++G A A C +C C
Sbjct: 1001 PDACDPHSGQCLHCLYHTEGPRCAHCKPGFHGQA---ARQSCHRCTC 1044
Score = 138 (53.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/198 (26%), Positives = 78/198 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P--NQ--GPCVQLDDDQVSNLG 58
CQ NT G CE C +Y + + + D C+ C C P +Q G C DD + +
Sbjct: 381 CQHNTAGRQCELCRPFFYRDPTKD-LRDPAVCRSCDCDPMGSQDGGRCDPHDDPALGLVS 439
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
+ R K + G+R + R + L+ + P C C C+ +
Sbjct: 440 GQCRC--KEHVVGSRCQQC---RDGFFGLSA--NNPLG------CQRCQCDPRGTVPGGT 486
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG---PCVQLDDDQ 170
CD SG C C+ G C RC G++G L + C+ C C G P Q
Sbjct: 487 PCDRNSGACFCKRLVTGQGCNRCLPGHWG--LSHDLLGCRPCDCDIGGALDPQCNEATGQ 544
Query: 171 VVCSECPRGYGGEKMSPG 188
C + G E++ PG
Sbjct: 545 CRCRQHMVGRRCEQVQPG 562
Score = 137 (53.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 52/207 (25%), Positives = 82/207 (39%)
Query: 5 CICQDNTGGDNCERCARGYYG---NALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+C+ NT G NCE+C Y+ + E + CK+C C D GN
Sbjct: 314 CVCKHNTRGLNCEQCQDFYHDLPWHPAEDRHSHACKKCECHGHAHSCHFDMAIYLASGNV 373
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHAD--IC 115
+ + N T G RQ ++ +PT C C+C+ G D C
Sbjct: 374 SG-GVCDGCQHN-TAG----RQCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRC 427
Query: 116 DAE--------SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG------ 161
D SG+C C+++ G C++C G++G + + C++C C +G
Sbjct: 428 DPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSANNPL-GCQRCQCDPRGTVPGGT 486
Query: 162 PCVQLDDDQVVCSECPRGYGGEKMSPG 188
PC + + C G G + PG
Sbjct: 487 PCDR-NSGACFCKRLVTGQGCNRCLPG 512
Score = 127 (49.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/125 (29%), Positives = 53/125 (42%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHAD-----ICDAESGRCI-CQDNTGGDNCERCARGYYG 142
G+ +P+ G C PC C+G+ D CD SG+C+ C +T G C C G++G
Sbjct: 975 GHFGDPSRPGG--GCQPCECSGNIDPTDPDACDPHSGQCLHCLYHTEGPRCAHCKPGFHG 1032
Query: 143 NALEGAV---------TDCKQCP------C-PNQGPCVQLDDDQ-VVCSECPRGYGGEKM 185
A + TD +QCP C P+ G C L + Q + C C +
Sbjct: 1033 QAARQSCHRCTCNLLGTDARQCPSTDHCNCDPSSGQCPCLPNVQGLSCDRCAPNFWNLTS 1092
Query: 186 SPGAQ 190
G Q
Sbjct: 1093 GRGCQ 1097
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 32/102 (31%), Positives = 43/102 (42%)
Query: 103 CVPCNCNGH---ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-- 157
C C C+ + +CDA SG+C C+ G C+RC RG +G C+ C C
Sbjct: 832 CQACQCSPEGALSGLCDATSGQCPCRAGAFGLRCDRCQRGQWG------FPSCRPCVCHG 885
Query: 158 ------PNQGPCVQLDDDQ--VVCSECPRGYGGEKMSP-GAQ 190
PN G C+ D C C G+ G+ P G Q
Sbjct: 886 HADECDPNTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQ 927
Score = 111 (44.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 29/84 (34%), Positives = 39/84 (46%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQ--GP 162
C H + CD SG+C C N G +C+RCA ++ N G C+ C C P++ GP
Sbjct: 1054 CPSTDHCN-CDPSSGQCPCLPNVQGLSCDRCAPNFW-NLTSGR--GCQPCACHPSRARGP 1109
Query: 163 CVQLDDDQVVCSECPRGYGGEKMS 186
Q C C G+GG S
Sbjct: 1110 ACNEFTGQ--C-HCRAGFGGRTCS 1130
Score = 97 (39.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 26/91 (28%), Positives = 38/91 (41%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----Q 154
C PC C+ C+ +G+C C+ GG C C ++G+ L+ DC
Sbjct: 1096 CQPCACHPSRARGPACNEFTGQCHCRAGFGGRTCSECQELHWGDPGLQCRACDCDPRGID 1155
Query: 155 CP-CPNQ-GPC-VQLDDDQVVCSECPRGYGG 182
P C G C + V C +C RG+ G
Sbjct: 1156 TPQCHRSTGHCSCRPGVSGVRCDQCARGFSG 1186
Score = 77 (32.2 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
+C C+ G C+ CA GYYG G C+ C C +G L D
Sbjct: 805 QCRCKPAVVGRRCDLCAPGYYGFGPTG----CQACQCSPEGALSGLCD 848
Score = 66 (28.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCVQLDD 51
+C C+ G C+RC RG +G C+ C C PN G C+ D
Sbjct: 853 QCPCRAGAFGLRCDRCQRGQWG------FPSCRPCVCHGHADECDPNTGTCLGCRD 902
>UNIPROTKB|Q6VU69 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 UniGene:Hs.436367 DNASU:3909
GeneID:3909 KEGG:hsa:3909 CTD:3909 HGNC:HGNC:6483 PharmGKB:PA30272
KO:K06240 ChiTaRS:LAMA3 GenomeRNAi:3909 NextBio:15345
HOVERGEN:HBG100777 EMBL:AY327114 IPI:IPI00895830
RefSeq:NP_001121190.1 ProteinModelPortal:Q6VU69 STRING:Q6VU69
PRIDE:Q6VU69 Ensembl:ENST00000587184 UCSC:uc002kut.4
ArrayExpress:Q6VU69 Bgee:Q6VU69 Uniprot:Q6VU69
Length = 1668
Score = 244 (91.0 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 50/108 (46%), Positives = 65/108 (60%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + G RCVPCNCNGH++ C SG C+ CQ NT G++CERC GYYGNA+ G
Sbjct: 62 GYYRDH-KGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVHG 120
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ CPCP+ CV ++ V CS C GY G E+ +PG
Sbjct: 121 S---CRACPCPHTNSFATGCV-VNGGDVRCS-CKAGYTGTQCERCAPG 163
Score = 179 (68.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 47/137 (34%), Positives = 62/137 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT G++CERC GYYGNA+ G+ C+ CPCP+ V N G R
Sbjct: 94 CVNCQHNTAGEHCERCQEGYYGNAVHGS---CRACPCPHTN---SFATGCVVN-GGDVRC 146
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K+ G + A GY P GG+ C CN NG C +G C
Sbjct: 147 SCKAGYTGTQCERCA---------PGYFGNPQKFGGSCQPC-SCNSNGQLGSCHPLTGDC 196
Query: 123 ICQ---DNTGGDNCERC 136
I Q D++ + C+ C
Sbjct: 197 INQEPKDSSPAEECDDC 213
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 30/91 (32%), Positives = 40/91 (43%)
Query: 89 GYHHEPTSGGAFSRCVPC-NCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNAL 145
GY+ G R PC + N A C G RC C+ G CERCA GY+GN
Sbjct: 112 GYYGNAVHGSC--RACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQ 169
Query: 146 EGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
+ + C+ C C + G QL + +C
Sbjct: 170 KFGGS-CQPCSCNSNG---QLGSCHPLTGDC 196
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 198 (74.8 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 42/103 (40%), Positives = 55/103 (53%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C PC CNG AD CD +G C+ C+D TGG++CERC G++G+ C+ CPCP
Sbjct: 872 FPNCRPCVCNGRADECDTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP 931
Query: 159 NQGPCVQLD----------DDQVVCSECPRGYGG---EKMSPG 188
+GP Q Q+VC +C GY G E +PG
Sbjct: 932 -EGPGSQRHFATSCHRDGYSQQIVC-QCREGYTGLRCEACAPG 972
Score = 155 (59.6 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 53/207 (25%), Positives = 82/207 (39%)
Query: 5 CICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
CIC+ NT G NCE+C Y + A +G C++C C D GN
Sbjct: 313 CICKHNTRGLNCEQCQDFYQDLPWHPAEDGHTHACRKCECNGHTHSCHFDMAVYLASGNV 372
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHAD--IC 115
+ + N T G R + ++ +PT C PC+C+ G D C
Sbjct: 373 SG-GVCDGCQHN-TAG----RHCEFCRPFFYRDPTKDMRDPAVCRPCDCDPMGSQDGGRC 426
Query: 116 DAE--------SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQG 161
D+ SG+C C+++ G C++C G++G + C++C C P
Sbjct: 427 DSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDP-RGCQRCQCNSRGTVPGSS 485
Query: 162 PCVQLDDDQVVCSECPRGYGGEKMSPG 188
PC C G+G ++ PG
Sbjct: 486 PC-DSSSGTCFCKRLVTGHGCDRCLPG 511
Score = 151 (58.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 57/198 (28%), Positives = 83/198 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC-P--NQ--GPCVQLDDDQVSNLG 58
CQ NT G +CE C +Y + + + D C+ C C P +Q G C DD V L
Sbjct: 380 CQHNTAGRHCEFCRPFFYRDPTKD-MRDPAVCRPCDCDPMGSQDGGRC-DSHDDPVLGLV 437
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
+ + R K + G R + R + L+ +P C C CN +
Sbjct: 438 SG-QCRCKEHVVGTRCQQC---RDGFFGLSA--SDPRG------CQRCQCNSRGTVPGSS 485
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDD--DQ 170
CD+ SG C C+ G C+RC G++G L + C+ C C G Q D+ Q
Sbjct: 486 PCDSSSGTCFCKRLVTGHGCDRCLPGHWG--LSHDLLGCRPCDCDVGGALDPQCDEATGQ 543
Query: 171 VVCSECPRGYGGEKMSPG 188
C + G E++ PG
Sbjct: 544 CRCRQHMIGRRCEQVQPG 561
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 55/196 (28%), Positives = 76/196 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C++ G CE CA G++G+ + C+ C C G +D D T
Sbjct: 955 CQCREGYTGLRCEACAPGHFGDPSKPGGR-CQLCEC--SGNIDPMDPDACDP---HT--- 1005
Query: 65 IKSALGGNRTRGLALTRQTH--YQLTGYHHEPTSGGAFSRCVPCNCNG-------HADIC 115
G R L T H Y G+H + RC CN G D+C
Sbjct: 1006 ------GQCLRCLHNTEGPHCGYCKPGFHGQAARQSCH-RCT-CNLLGTDPRRCPSTDLC 1057
Query: 116 --DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQ--GPCVQLDDDQ 170
D +G+C C + G NC+ CA ++ N G C+ C C P++ GP Q
Sbjct: 1058 HCDPSTGQCPCLPHVQGLNCDHCAPNFW-NFTSGR--GCQPCACHPSRARGPTCNEFTGQ 1114
Query: 171 VVCSECPRGYGGEKMS 186
C C G+GG S
Sbjct: 1115 --C-HCHAGFGGRTCS 1127
Score = 113 (44.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C+ C+D TGG++CERC G++G+ C+ CPCP +GP
Sbjct: 894 CLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP-EGP 934
Score = 101 (40.6 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 27/92 (29%), Positives = 38/92 (41%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGN-ALEGAVTDCK----- 153
C PC C+ C+ +G+C C GG C C Y+G+ L+ DC
Sbjct: 1093 CQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELYWGDPGLQCRACDCDPRGID 1152
Query: 154 --QCPCPNQGPC-VQLDDDQVVCSECPRGYGG 182
QC + G C + V C +C RG+ G
Sbjct: 1153 KPQCH-RSTGHCSCRPGVSGVRCDQCARGFSG 1183
Score = 91 (37.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 28/88 (31%), Positives = 38/88 (43%)
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQ--GPCVQLDDDQV 171
CD +G+C C + G NC+ CA ++ N G C+ C C P++ GP Q
Sbjct: 1059 CDPSTGQCPCLPHVQGLNCDHCAPNFW-NFTSGR--GCQPCACHPSRARGPTCNEFTGQC 1115
Query: 172 ---------VCSECPRGYGGEKMSPGAQ 190
CSEC Y G+ PG Q
Sbjct: 1116 HCHAGFGGRTCSECQELYWGD---PGLQ 1140
Score = 76 (31.8 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C+ CA GYYG G C+ C C G
Sbjct: 802 QCRCKPGVVGRRCDVCATGYYGFGPAG----CQACQCSPDG 838
Score = 59 (25.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
+C C+ G C+ C RG +G +C+ C C G + D + LG R
Sbjct: 850 QCPCRPGAFGLRCDHCQRGQWG------FPNCRPCVC--NGRADECDTHTGACLGCR 898
Score = 47 (21.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 22/83 (26%), Positives = 33/83 (39%)
Query: 54 VSNLGNRTRIRIKSALGG---NRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG 110
VSN + TR R + +G N R +Q +L+ + H + G + V C G
Sbjct: 1359 VSNSAD-TRRRTEVLMGAQKENFNRQHLANQQALGRLSAHAHTLSLTG-INELV-CGAPG 1415
Query: 111 HADICDAESGRCICQDNTGGDNC 133
A + G C+D G C
Sbjct: 1416 DAPCATSPCGGAGCRDEDGQPRC 1438
Score = 39 (18.8 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 173 CSECPRGYGGEKMSPGAQ 190
C C G+ G+ PG +
Sbjct: 966 CEACAPGHFGDPSKPGGR 983
>UNIPROTKB|B0YJ33 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 IPI:IPI00790908 RefSeq:NP_000218.2
UniGene:Hs.436367 DNASU:3909 GeneID:3909 KEGG:hsa:3909 CTD:3909
HGNC:HGNC:6483 PharmGKB:PA30272 KO:K06240 ChiTaRS:LAMA3
GenomeRNAi:3909 NextBio:15345 HOGENOM:HOG000048708 EMBL:EF444992
STRING:B0YJ33 Ensembl:ENST00000269217 UCSC:uc002kus.4
HOVERGEN:HBG100777 Uniprot:B0YJ33
Length = 1724
Score = 244 (91.0 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 50/108 (46%), Positives = 65/108 (60%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + G RCVPCNCNGH++ C SG C+ CQ NT G++CERC GYYGNA+ G
Sbjct: 62 GYYRDH-KGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVHG 120
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ CPCP+ CV ++ V CS C GY G E+ +PG
Sbjct: 121 S---CRACPCPHTNSFATGCV-VNGGDVRCS-CKAGYTGTQCERCAPG 163
Score = 179 (68.1 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 47/137 (34%), Positives = 62/137 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT G++CERC GYYGNA+ G+ C+ CPCP+ V N G R
Sbjct: 94 CVNCQHNTAGEHCERCQEGYYGNAVHGS---CRACPCPHTN---SFATGCVVN-GGDVRC 146
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K+ G + A GY P GG+ C CN NG C +G C
Sbjct: 147 SCKAGYTGTQCERCA---------PGYFGNPQKFGGSCQPC-SCNSNGQLGSCHPLTGDC 196
Query: 123 ICQ---DNTGGDNCERC 136
I Q D++ + C+ C
Sbjct: 197 INQEPKDSSPAEECDDC 213
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 30/91 (32%), Positives = 40/91 (43%)
Query: 89 GYHHEPTSGGAFSRCVPC-NCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNAL 145
GY+ G R PC + N A C G RC C+ G CERCA GY+GN
Sbjct: 112 GYYGNAVHGSC--RACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQ 169
Query: 146 EGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
+ + C+ C C + G QL + +C
Sbjct: 170 KFGGS-CQPCSCNSNG---QLGSCHPLTGDC 196
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 202 (76.2 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 43/112 (38%), Positives = 62/112 (55%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYY-GNALE 146
GY+ + G +CVPCNCNGH+D C SG C+ C+ NT G++CE+C G++ N ++
Sbjct: 1827 GYYRD-NKGLFLGKCVPCNCNGHSDQCLDGSGICVNCRHNTAGNHCEKCLGGFHHNNTVD 1885
Query: 147 GAVTDCKQCPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
G C CPCP Q CV+ ++ + C C GY G E+ +PG
Sbjct: 1886 GHSVSCSSCPCPLQVASNNFAIRCVEKPNN-MRCL-CMPGYAGSKCERCAPG 1935
Score = 183 (69.5 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 54/181 (29%), Positives = 71/181 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C N GD+C++CA GYY + + C C C DQ + G+ +
Sbjct: 1810 CLCPGNYLGDSCQQCAPGYYRDNKGLFLGKCVPCNCNGHS-------DQCLD-GSGICVN 1861
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC------NGHADICDAE 118
+ GN L G+HH T G C C C N A C +
Sbjct: 1862 CRHNTAGNHCEKC---------LGGFHHNNTVDGHSVSCSSCPCPLQVASNNFAIRCVEK 1912
Query: 119 SG--RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDDDQVVCSE 175
RC+C G CERCA GYYGN + T C+ C C N P + D + E
Sbjct: 1913 PNNMRCLCMPGYAGSKCERCAPGYYGNPVVIGST-CQPCNCNGNSDPNMLFSDCHPLTGE 1971
Query: 176 C 176
C
Sbjct: 1972 C 1972
Score = 165 (63.1 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 50/174 (28%), Positives = 72/174 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC C+ N G+NC++CA GY +C Q G ++ + N
Sbjct: 438 RCYCKPNYTGENCDQCAEGYEH------FPECYQVLI--NGEVRPAGENIIDCECNAAGT 489
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPCNCNGHADI---CDAES 119
S RT T + TG H + S G FS C C C+G + CDA +
Sbjct: 490 EGNSCRPDPRTN----TCVCKPEFTGEHCDTCSHGYFSINCQRCQCSGQGCLDGSCDAVT 545
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
G+C+C+ G +CE+CA GY+ L C+ C C G ++ D C
Sbjct: 546 GQCVCRSGFQGYSCEQCAPGYFNYPL------CQYCGCSVVGSIPEMCDPAGRC 593
Score = 162 (62.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 53/198 (26%), Positives = 83/198 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPCPNQ---GPCVQLDDDQVSNL 57
C+ CQ +T G NCERC GYY + LE C +C C ++ G C +D+
Sbjct: 385 CVECQHHTTGVNCERCIPGYYRSPDHPLESPFA-CSKCQCESEFTEGTC----EDRTGRC 439
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADIC- 115
+ ++ G + + L P +G C CN G + C
Sbjct: 440 YCKPNYTGENC--DQCAEGYEHFPECYQVLINGEVRP-AGENIIDC-ECNAAGTEGNSCR 495
Query: 116 -DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD----Q 170
D + C+C+ G++C+ C+ GY+ +C++C C QG C+ D Q
Sbjct: 496 PDPRTNTCVCKPEFTGEHCDTCSHGYFS-------INCQRCQCSGQG-CLDGSCDAVTGQ 547
Query: 171 VVCSECPRGYGGEKMSPG 188
VC +GY E+ +PG
Sbjct: 548 CVCRSGFQGYSCEQCAPG 565
Score = 160 (61.4 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 54/190 (28%), Positives = 78/190 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+C G CERCA GYYGN + T C+ C C L D G
Sbjct: 1917 RCLCMPGYAGSKCERCAPGYYGNPVVIGST-CQPCNCNGNSDPNMLFSDCHPLTGE---- 1971
Query: 64 RIKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPCNCN--GHADICDAES 119
+S + + T G H ++ G++ + + C CNC+ G A CD+ +
Sbjct: 1972 -CQSCM--HNTAG------PHCEICAPGFYGDAITA---KNCTRCNCSPCGTAH-CDSHT 2018
Query: 120 GRCICQDNTGGDNCERCARGYYG-NALEGA-VTDCKQCP-----C-PNQGPCV-QLDDDQ 170
G+C C+ G C+RC G +G ++ G DC C P G C Q +
Sbjct: 2019 GQCHCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNGACACQPGVNG 2078
Query: 171 VVCSECPRGY 180
C +C G+
Sbjct: 2079 PNCHQCAPGH 2088
Score = 149 (57.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 41/153 (26%), Positives = 66/153 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVT----DCKQCPCP-NQGPCVQLDDDQVSNLG 58
+C CQ NT G +C+ C G+ + A T +C+ C C + C D ++
Sbjct: 313 QCDCQHNTCGTSCDGCCPGFNQFPWKPATTYSANECEPCNCHRHSSECYY--DPEIDQ-- 368
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQ-------LTGYHHEPTSG--GAFSRCVPCNCN 109
R+ + ++ G G+ + Q H + GY+ P F+ C C C
Sbjct: 369 RRSSLDMQGEYNGG---GVCVECQHHTTGVNCERCIPGYYRSPDHPLESPFA-CSKCQCE 424
Query: 110 GH--ADICDAESGRCICQDNTGGDNCERCARGY 140
C+ +GRC C+ N G+NC++CA GY
Sbjct: 425 SEFTEGTCEDRTGRCYCKPNYTGENCDQCAEGY 457
Score = 125 (49.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 103 CVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
C CNC+ G A CD+ +G+C C+ G C+RC G +G + T C++C C
Sbjct: 2001 CTRCNCSPCGTAH-CDSHTGQCHCKPGVVGAQCDRCEHGTFGF---DSCTGCRKCDCDAS 2056
Query: 161 GPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
VQ D C G G + +PG
Sbjct: 2057 AALVQACDPVNGACACQPGVNGPNCHQCAPG 2087
Score = 123 (48.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 104 VPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--- 157
VPC C+ +D C++ G+C C+ N G +C +CA GYYG +C+ C C
Sbjct: 1419 VPCGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATGYYG------FPNCRPCNCGSR 1472
Query: 158 ---PNQGPCV----QLDDDQVVCSECPRGYG 181
P G C+ L D V C P+ +G
Sbjct: 1473 LCEPVTGECICPPRTLQPDCVTCE--PQTFG 1501
Score = 121 (47.7 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 100 FSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
+ C PCNCN G ++CD+ +GRC+C++N G C++C G + A C +C
Sbjct: 1553 YPNCRPCNCNEAGTEMNVCDSFTGRCLCKENVEGPRCDQCKLGTFHLDPTNA-KGCTKCF 1611
Query: 157 C 157
C
Sbjct: 1612 C 1612
Score = 118 (46.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 103 CVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C C+C+ A + CD +G C CQ G NC +CA G++ + G C++C C
Sbjct: 2048 CRKCDCDASAALVQACDPVNGACACQPGVNGPNCHQCAPGHWNYSSNG----CRKCECKG 2103
Query: 160 QGPCVQLDDDQVVCSECPRGYGGEK 184
G C D C C G G++
Sbjct: 2104 -GRC---DPRTGEC-RCTTGLTGKQ 2123
Score = 114 (45.2 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 103 CVPCNCN--G--HADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C CNC+ G DI CD +G+C C++N G C+RC G+YG +C+ C C
Sbjct: 1508 CEMCNCSRPGVTSMDISCDTNNGQCRCRNNIVGRQCDRCFPGFYG------YPNCRPCNC 1561
Query: 158 PNQGPCVQLDDD---QVVCSECPRG 179
G + + D + +C E G
Sbjct: 1562 NEAGTEMNVCDSFTGRCLCKENVEG 1586
Score = 109 (43.4 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 99 AFSRCVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYG 142
++ C PC+C+ + CD SG+C+C N G C+ C+ G YG
Sbjct: 658 SYPSCTPCDCSVEGSRSSSCDPVSGQCVCLPNIEGQRCDSCSPGSYG 704
Score = 103 (41.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 29/96 (30%), Positives = 39/96 (40%)
Query: 68 ALGGN-RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQD 126
+ GG R R + R TGY+ F C PCNC +C+ +G CIC
Sbjct: 1435 SFGGQCRCRPNVIGRDCSQCATGYY-------GFPNCRPCNCGSR--LCEPVTGECICPP 1485
Query: 127 NTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQG 161
T +C C +G + L G C+ C C G
Sbjct: 1486 RTLQPDCVTCEPQTFGCHPLVG----CEMCNCSRPG 1517
Score = 95 (38.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/87 (25%), Positives = 34/87 (39%)
Query: 103 CVPCNCNGHADI-----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C C+CN + C +G+C C+ N C C G++ N + + C+ C C
Sbjct: 759 CSTCDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKDGFF-NLQKDSYFGCQGCQC 817
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEK 184
G Q D++ C G K
Sbjct: 818 DIGGSVGQACDERYGRCRCRPNVEGPK 844
Score = 78 (32.5 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC------PNQGPCV 47
+C C+ N G +C +CA GYYG +C+ C C P G C+
Sbjct: 1439 QCRCRPNVIGRDCSQCATGYYG------FPNCRPCNCGSRLCEPVTGECI 1482
Score = 76 (31.8 bits), Expect = 7.9e-19, Sum P(2) = 7.9e-19
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C++N G C+RC G+YG +C+ C C G
Sbjct: 1531 QCRCRNNIVGRQCDRCFPGFYG------YPNCRPCNCNEAG 1565
Score = 76 (31.8 bits), Expect = 7.9e-19, Sum P(2) = 7.9e-19
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C++CA GYY + C C C +G
Sbjct: 637 QCNCRPNYSGPRCQQCAPGYY------SYPSCTPCDCSVEG 671
Score = 67 (28.6 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
RC+C++N G C++C G + A C +C C
Sbjct: 1577 RCLCKENVEGPRCDQCKLGTFHLDPTNA-KGCTKCFC 1612
Score = 67 (28.6 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 4 RCICQDNTGGDNCERCARGY--YGN----------ALEGAVTDCKQCPC-PN-QGP-CVQ 48
RC+C+ G C++C G+ Y N +L+ + ++ QC C PN GP C Q
Sbjct: 592 RCLCRPEFTGPRCDQCQSGFHSYPNCQVCTCDPRTSLDSSCSELDQCNCRPNYSGPRCQQ 651
Score = 50 (22.7 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 5 CICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQG 44
CIC T +C C +G + L G C+ C C G
Sbjct: 1481 CICPPRTLQPDCVTCEPQTFGCHPLVG----CEMCNCSRPG 1517
Score = 43 (20.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 2 FRRCICQDNTGGDNCERCARGYY 24
+ RC C+ N G C++ +Y
Sbjct: 831 YGRCRCRPNVEGPKCKQPRPDHY 853
Score = 38 (18.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 173 CSECPRGYGG 182
CS+C GY G
Sbjct: 1451 CSQCATGYYG 1460
Score = 37 (18.1 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 171 VVCSECPRGYG 181
V S CP GYG
Sbjct: 1312 VNASFCPHGYG 1322
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 220 (82.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 54/182 (29%), Positives = 79/182 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ--GPCVQLDDDQVSNLGNRT 61
CI CQD+T G +C+ C GYYGN L G+ C+ C CP D + N
Sbjct: 899 CIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNNNM 958
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-----CD 116
+ G+R A + P +GG C C C+ + D+ CD
Sbjct: 959 LCHCQEGYSGSRCEICA---------DNFFGNPDNGGT---CSKCECSNNVDLYDTGNCD 1006
Query: 117 AESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSE 175
++G C+ C T GD+CE C G++G+AL+ +C+QC C G + +
Sbjct: 1007 RQTGACLKCLYQTTGDHCELCKDGFFGDALQ---QNCQQCECDFLGTNNTIAHCDRFTGQ 1063
Query: 176 CP 177
CP
Sbjct: 1064 CP 1065
Score = 188 (71.2 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 37/95 (38%), Positives = 48/95 (50%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C C CNGHA CD G CI CQD+T G +C+ C GYYGN L G+ C+ C CP
Sbjct: 877 FPECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCP 936
Query: 159 N---------QGPCVQLDDDQVVCSECPRGYGGEK 184
G + ++ ++C C GY G +
Sbjct: 937 ETVASGLAHADGCSLDTRNNNMLC-HCQEGYSGSR 970
Score = 160 (61.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/189 (29%), Positives = 73/189 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C CQ+ G CE CA ++GN G C +C C N V L D GN
Sbjct: 960 CHCQEGYSGSRCEICADNFFGNPDNGGT--CSKCECSNN---VDLYDT-----GNC---- 1005
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-----RCVPCNC-----NGHADI 114
+R G L + YQ TG H E G F C C C N
Sbjct: 1006 -------DRQTGACL--KCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAH 1056
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNAL-EGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
CD +G+C C N G C++CA ++ A EG C+ C C G + +
Sbjct: 1057 CDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEG----CESCNCDPIGALHEQCNSYTGQ 1112
Query: 174 SECPRGYGG 182
+C G+GG
Sbjct: 1113 CQCKPGFGG 1121
Score = 152 (58.6 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 53/192 (27%), Positives = 86/192 (44%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRT-R 62
C+ C T GD+CE C G++G+AL+ +C+QC C G ++ +++ T +
Sbjct: 1012 CLKCLYQTTGDHCELCKDGFFGDALQ---QNCQQCECDFLGT-----NNTIAHCDRFTGQ 1063
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAES 119
+ G R A + H+++ SG C CNC+ + C++ +
Sbjct: 1064 CPCLPNVQGVRCDQCA---ENHWKIA-------SGEG---CESCNCDPIGALHEQCNSYT 1110
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVT-DCKQC-----PCPNQ-GPCVQLDD-DQV 171
G+C C+ GG C +C Y+GN E +C Q C + G CV +
Sbjct: 1111 GQCQCKPGFGGRACNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGY 1170
Query: 172 VCSECPRGYGGE 183
C+EC RGY G+
Sbjct: 1171 KCNECARGYIGQ 1182
Score = 139 (54.0 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 45/158 (28%), Positives = 68/158 (43%)
Query: 15 NCERCARGYYG--NALEGAVTDCKQCPC-PN-QGP-CVQLDDD--QVSNLGNRTRIRIKS 67
NC++C + G N + QCPC PN QG C Q ++ ++++ G
Sbjct: 1039 NCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIAS-GEGCESCNCD 1097
Query: 68 ALGGNRTRGLALTRQTHYQLTGYHHEPTS-------GGAFSRCVPCNCN--GHADI-CDA 117
+G + + T Q + G+ + G +C PC C+ G AD CD
Sbjct: 1098 PIGALHEQCNSYTGQCQCK-PGFGGRACNQCQAHYWGNPNEKCQPCECDQFGAADFQCDR 1156
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
E+G C+C + GG C CARGY G + C +C
Sbjct: 1157 ETGNCVCHEGIGGYKCNECARGYIGQFPH--CSPCGEC 1192
Score = 134 (52.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 42/176 (23%), Positives = 66/176 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C NT G +CE C +Y + + ++ C+ C C QG DD + + N +
Sbjct: 385 CLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGS----SDDGICDSLNE--LE 438
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI----CDAESG 120
+ G + R+ + GY + + C PC CN + C +G
Sbjct: 439 EGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNP--EGCEPCTCNPLGTLNNSGCVMRTG 496
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
C C+ G +C +C YG L + C C C G D V+ +C
Sbjct: 497 ECKCKKYVTGKDCNQCMPETYG--LSESPEGCSLCNCDAGGSYDNYCD--VISGQC 548
Score = 133 (51.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 33/91 (36%), Positives = 40/91 (43%)
Query: 103 CVPCNCN--GHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCK--QCPC 157
C C+CN G D CD +G+C C NT G C +C GY+ N E V C C
Sbjct: 834 CKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYW-NFPECRVCQCNGHAATC 892
Query: 158 -PNQGPCVQLDDDQV--VCSECPRGYGGEKM 185
P QG C+ D C C GY G +
Sbjct: 893 DPIQGTCIDCQDSTTGYSCDSCLDGYYGNPL 923
Score = 132 (51.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 47/173 (27%), Positives = 66/173 (38%)
Query: 4 RCICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
RC C NT G NCE C + + A CK+C C + D+ + G
Sbjct: 317 RCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKCECNDHAVSCHFDEAVFTASG- 375
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFSR-CVPCNCN--GHAD- 113
GG L TR H + + ++ +P R C PC+C+ G +D
Sbjct: 376 -------FVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSSDD 428
Query: 114 -ICD--------AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
ICD A +G C C+ G C +C GY+ N C+ C C
Sbjct: 429 GICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYW-NLQSDNPEGCEPCTC 480
Score = 127 (49.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 32/91 (35%), Positives = 45/91 (49%)
Query: 106 CNCN--GH-ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
CNCN G + +C++ G C C+ N G C++CA G YG EG CK C C + G
Sbjct: 789 CNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFGPEG----CKACDCNSIGS 844
Query: 163 CVQLDDDQVVCSEC---PRGYGGE--KMSPG 188
+ D ++ +C P YG E + PG
Sbjct: 845 KDKYCD--LITGQCQCVPNTYGRECNQCQPG 873
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 103 CVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C CNC+ + C++ +G+C C+ GG C +C Y+GN E C+ C C
Sbjct: 1091 CESCNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNE----KCQPCECDQ 1146
Query: 160 QGPC-VQLDDDQVVCSECPRGYGGEKMSPGAQ 190
G Q D + C C G GG K + A+
Sbjct: 1147 FGAADFQCDRETGNCV-CHEGIGGYKCNECAR 1177
Score = 84 (34.6 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ N G C++CA G YG EG CK C C + G
Sbjct: 808 CQCKPNVVGRQCDQCAPGTYGFGPEG----CKACDCNSIG 843
Score = 79 (32.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCK--QCPC-PNQGPCVQLDD 51
+C C NT G C +C GY+ N E V C C P QG C+ D
Sbjct: 855 QCQCVPNTYGRECNQCQPGYW-NFPECRVCQCNGHAATCDPIQGTCIDCQD 904
Score = 59 (25.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNAL-EGAVTDCKQCPC 40
+C C N G C++CA ++ A EG C+ C C
Sbjct: 1063 QCPCLPNVQGVRCDQCAENHWKIASGEG----CESCNC 1096
Score = 54 (24.1 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ G +C +C YG L + C C C G
Sbjct: 498 CKCKKYVTGKDCNQCMPETYG--LSESPEGCSLCNCDAGG 535
Score = 36 (17.7 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C+ + G +C + + Y+
Sbjct: 547 QCRCRPHMTGRSCSQPKQNYF 567
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 199 (75.1 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 46/112 (41%), Positives = 62/112 (55%)
Query: 89 GYHHEPTSGGAFSR-CVPCNCNGHADICDAESGRCI-CQDNT---GGDNCERCARGYYGN 143
GY+ E + G ++ CVPCNCNGH++ C SG CI C GG++CERC G Y N
Sbjct: 1575 GYYRE--NKGLYTGWCVPCNCNGHSNRCQDGSGICIECSSGMTIRGGEHCERCKEGSYWN 1632
Query: 144 ALEGAVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ G+ C+ CPCP+ CV + + V CS C GY G E+ +PG
Sbjct: 1633 TIHGS---CRVCPCPHSDSFATGCV-VTGENVKCS-CKPGYTGTRCERCAPG 1679
Score = 198 (74.8 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 52/152 (34%), Positives = 69/152 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGPCVQLDDDQVSNLGN 59
RC CQ NT GD C+RC GY A +C+ C C D D V
Sbjct: 221 RCECQHNTCGDTCDRCCMGYNQRRWRPATGKQSNECEACNCHGHSTDCYYDPD-VERQQA 279
Query: 60 RTRIRIKSALGG------NRTRGLALTR--QTHYQLTGYH-HEPTSGGAFSRCVPCNCNG 110
I+ A GG + T G+ + + +Y+ G H P C+PC+C+
Sbjct: 280 SLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPYGIPVHAPDG------CIPCSCHP 333
Query: 111 -HADICDAESGRCICQDNTGGDNCERCARGYY 141
HA+ C+ SGRC C+ N GD+CE CA GYY
Sbjct: 334 EHAEDCEQGSGRCTCRPNFRGDHCEECAAGYY 365
Score = 148 (57.2 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 41/130 (31%), Positives = 57/130 (43%)
Query: 12 GGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGG 71
GG++CERC G Y N + G+ C+ CPCP+ V+ G + K G
Sbjct: 1618 GGEHCERCKEGSYWNTIHGS---CRVCPCPHSDSFAT--GCVVT--GENVKCSCKPGYTG 1670
Query: 72 NRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--CDAESGRCICQD--N 127
R A GY P G C PCNCN + + CD +G CI Q+ +
Sbjct: 1671 TRCERCA---------PGYFGNPQKFGG--SCQPCNCNSNGQLGSCDPLNGDCINQEPKD 1719
Query: 128 TG-GDNCERC 136
+G G+ C+ C
Sbjct: 1720 SGPGEECDDC 1729
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 38/118 (32%), Positives = 53/118 (44%)
Query: 63 IRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+R + LG R +TR+ +Y + + + GG RCV CNGHA++C+A +
Sbjct: 166 LRTNTLLGHLISKAQRDPTVTRRYYYSIK----DISIGG---RCV---CNGHAEVCNANN 215
Query: 120 G----RCICQDNTGGDNCERCARGYYGNALEGAV----TDCKQCPCPNQGPCVQLDDD 169
RC CQ NT GD C+RC GY A +C+ C C D D
Sbjct: 216 PEKLFRCECQHNTCGDTCDRCCMGYNQRRWRPATGKQSNECEACNCHGHSTDCYYDPD 273
Score = 131 (51.2 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 51/190 (26%), Positives = 80/190 (42%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C C + GD+C+ C+ GYY +G T C C C N G+ R
Sbjct: 1558 CACPPDYTGDSCQGCSPGYYREN-KGLYTGWCVPCNC---------------N-GHSNRC 1600
Query: 64 RIKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSGGAFSRCVPC-NCNGHADIC--DAE 118
+ S + + G+ + H + G + G R PC + + A C E
Sbjct: 1601 QDGSGICIECSSGMTIRGGEHCERCKEGSYWNTIHGSC--RVCPCPHSDSFATGCVVTGE 1658
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP---CVQLDDDQVVCSE 175
+ +C C+ G CERCA GY+GN + + C+ C C + G C L+ D + ++
Sbjct: 1659 NVKCSCKPGYTGTRCERCAPGYFGNPQKFGGS-CQPCNCNSNGQLGSCDPLNGDCI--NQ 1715
Query: 176 CPRGYG-GEK 184
P+ G GE+
Sbjct: 1716 EPKDSGPGEE 1725
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 31/97 (31%), Positives = 44/97 (45%)
Query: 93 EPTSGGAFSRCVPCNCNGHA-DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
+P +G C CN G +ICDA+ GRC+C+ GG C+ C G+Y +
Sbjct: 385 DPVAGDIIKGC-DCNLEGVLPEICDAQ-GRCLCRPGVGGAQCDACRPGFYSFPI------ 436
Query: 152 CKQCPCPNQG----PCVQLDDDQVVCSECPRGYGGEK 184
C+ C C G PC + C EC G G++
Sbjct: 437 CQACQCSALGSYQTPCSPVTGQ---C-ECQPGITGQR 469
Score = 107 (42.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 86 QLTGYHHEPTSGG--AFSRCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGY 140
++TG + + G F C+PC+C+ G +CD +G C+C++N G C C G
Sbjct: 1287 RITGRQCDRCAPGFYRFPECLPCHCSRDGTEPGVCDPGTGACLCKENVQGTECNMCREGS 1346
Query: 141 YGNALEGA-VTDCKQCPC 157
+ L+ A C C C
Sbjct: 1347 F--YLDPANPKGCTSCFC 1362
Score = 106 (42.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 24/71 (33%), Positives = 29/71 (40%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALE 146
L +HE G C P GH C E G+C C+ + G C RC G+YG
Sbjct: 1159 LVALYHE---GALPCECHPAGATGHP--CSPEGGQCPCRPHVIGRQCTRCQTGFYG---- 1209
Query: 147 GAVTDCKQCPC 157
CK C C
Sbjct: 1210 --FPHCKPCSC 1218
Score = 96 (38.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERC-ARGYYGNALEGAVTDCKQCPCP 158
F C PC+C +C+ +GRC+C T C+ C + + L G C+ C C
Sbjct: 1210 FPHCKPCSCGRR--LCEETTGRCLCPPLTVRPQCDVCEVHSFSFHPLAG----CEGCNCS 1263
Query: 159 NQGP----CVQLDDDQVVCSECPR--GYGGEKMSPG 188
G + D D C PR G ++ +PG
Sbjct: 1264 RTGTDGTTTPECDGDHGQCRCRPRITGRQCDRCAPG 1299
Score = 93 (37.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/65 (32%), Positives = 28/65 (43%)
Query: 103 CVPCNCN--GHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+ G CD + G+C C+ G C+RCA G+Y +C C
Sbjct: 1257 CEGCNCSRTGTDGTTTPECDGDHGQCRCRPRITGRQCDRCAPGFY------RFPECLPCH 1310
Query: 157 CPNQG 161
C G
Sbjct: 1311 CSRDG 1315
Score = 78 (32.5 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYG----NALEGAVTDCKQCPC-PNQGPC 46
RC+C+ GG C+ C G+Y A + + Q PC P G C
Sbjct: 412 RCLCRPGVGGAQCDACRPGFYSFPICQACQCSALGSYQTPCSPVTGQC 459
Score = 67 (28.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ + G C RC G+YG CK C C
Sbjct: 1188 QCPCRPHVIGRQCTRCQTGFYG------FPHCKPCSC 1218
Score = 67 (28.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ G C+RCA G+Y +C C C G
Sbjct: 1281 QCRCRPRITGRQCDRCAPGFY------RFPECLPCHCSRDG 1315
Score = 59 (25.8 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C+C++N G C C G + L+ A C C C
Sbjct: 1328 CLCKENVQGTECNMCREGSF--YLDPANPKGCTSCFC 1362
Score = 52 (23.4 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 4 RCICQDNTGGDNCERCARG 22
+C CQ G C+RC G
Sbjct: 458 QCECQPGITGQRCDRCLSG 476
Score = 47 (21.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 4 RCICQDNTGGDNCERC-ARGYYGNALEGAVTDCKQCPCPNQG 44
RC+C T C+ C + + L G C+ C C G
Sbjct: 1229 RCLCPPLTVRPQCDVCEVHSFSFHPLAG----CEGCNCSRTG 1266
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 244 (91.0 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 59/180 (32%), Positives = 82/180 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNLGNRTR 62
C+ C+D+T G NC +CA GYYG+A G DC+ C CP P +V G
Sbjct: 758 CLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPCACPLLSPANNFSPTCRVDGRGEVIC 817
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-----ICDA 117
R G+R + GY P G C PC C+G+ D CD
Sbjct: 818 DRCPPGYTGSRCDRCS---------NGYFGRPNIPGG--SCQPCVCSGNLDQTAPLSCDP 866
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
+G C+ C+ GG +CERCA GY+G+AL +C+ C C + G +L + +C
Sbjct: 867 LTGACLRCRKGYGGADCERCADGYFGDAL--IAKNCQACQCHSNGSVSELCHQETGQCQC 924
Score = 234 (87.4 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 49/115 (42%), Positives = 61/115 (53%)
Query: 85 YQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGN 143
Y+L+ S F CV C CNGH+D CD E+ C CQ NT GD CERCA G+YG
Sbjct: 1376 YRLSVLAGGSASRAGFGSCVRCQCNGHSDSCDPETSICQNCQHNTVGDKCERCAAGFYG- 1434
Query: 144 ALEGAVTDCKQCPCP------NQGPCVQLDD-DQVVCSECPRGYGG---EKMSPG 188
+ G DCK C CP N P Q + ++ C+ CP GY G E+ +PG
Sbjct: 1435 VVRGFTDDCKPCACPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHCERCAPG 1489
Score = 215 (80.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 38/90 (42%), Positives = 52/90 (57%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP--- 158
C C C+GH + CD +G C+ C+D+T G NC +CA GYYG+A G DC+ C CP
Sbjct: 739 CELCQCHGHTERCDDLTGHCLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPCACPLLS 798
Query: 159 ---NQGPCVQLDD-DQVVCSECPRGYGGEK 184
N P ++D +V+C CP GY G +
Sbjct: 799 PANNFSPTCRVDGRGEVICDRCPPGYTGSR 828
Score = 178 (67.7 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 55/191 (28%), Positives = 80/191 (41%)
Query: 7 CQDNTGGD-----NCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-SNL-GN 59
C D GD NC+ C G+ E + QC C Q D+ S+L G
Sbjct: 886 CADGYFGDALIAKNCQACQCHSNGSVSELCHQETGQCQCRQHVIGRQCDECMAGSHLQGA 945
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQ--LTGYHHEPTSGGAFS----RCVPCNCNGHAD 113
+ G+++ + Q Q +TG + + G FS C PC C +
Sbjct: 946 LGCVPCHCNSFGSKSFDCDESGQCRCQPGVTGQKCDRCAAGHFSFQEGGCTPCQCAHVGN 1005
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
CDA +G+CIC NT G+ C++CA ++G+ + T CK C C G Q + C
Sbjct: 1006 NCDASTGQCICPPNTVGERCDKCAPNHWGHDIS---TGCKPCGCNALGSVAQQCNLNTGC 1062
Query: 174 SECPRGYGGEK 184
C + GEK
Sbjct: 1063 CMCREQFRGEK 1073
Score = 163 (62.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 53/189 (28%), Positives = 79/189 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ + G C+ C G + L+GA+ C C C + G D D+ +
Sbjct: 921 QCQCRQHVIGRQCDECMAGSH---LQGAL-GCVPCHCNSFGS-KSFDCDESG------QC 969
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
R + + G + A G H GG C PC C + CDA +G+CI
Sbjct: 970 RCQPGVTGQKCDRCA---------AG-HFSFQEGG----CTPCQCAHVGNNCDASTGQCI 1015
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-----------NQGPCVQLDDDQ-V 171
C NT G+ C++CA ++G+ + T CK C C N G C+ + +
Sbjct: 1016 CPPNTVGERCDKCAPNHWGHDIS---TGCKPCGCNALGSVAQQCNLNTGCCMCREQFRGE 1072
Query: 172 VCSECPRGY 180
C EC GY
Sbjct: 1073 KCDECKLGY 1081
Score = 162 (62.1 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 54/186 (29%), Positives = 75/186 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR-- 64
C TG C RC +GY G DC++C G + + Q + +
Sbjct: 864 CDPLTGA--CLRCRKGYGG-------ADCERCADGYFGDALIAKNCQACQCHSNGSVSEL 914
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADI-CDAESGR 121
G + R + RQ + G H + GA CVPC+CN G CD ESG+
Sbjct: 915 CHQETGQCQCRQHVIGRQCDECMAGSHLQ----GALG-CVPCHCNSFGSKSFDCD-ESGQ 968
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
C CQ G C+RCA G++ + EG C C C + G Q +C G
Sbjct: 969 CRCQPGVTGQKCDRCAAGHF-SFQEGG---CTPCQCAHVGNNCDASTGQCICPPNTVGER 1024
Query: 182 GEKMSP 187
+K +P
Sbjct: 1025 CDKCAP 1030
Score = 158 (60.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 49/166 (29%), Positives = 69/166 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+CIC NT G+ C++CA ++G+ + T CK C C G Q NL N
Sbjct: 1013 QCICPPNTVGERCDKCAPNHWGHDIS---TGCKPCGCNALGSVAQQ-----CNL-NTGCC 1063
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHA-DICDAESG 120
+ G + L GY F +C+ C C+ G + D CD+ESG
Sbjct: 1064 MCREQFRGEKCDECKL---------GYRD-------FPQCISCQCSAAGSSLDTCDSESG 1107
Query: 121 RCICQDNTG---------GDNCERCARGYYGNALEGAVTDCKQCPC 157
C C D +G G CERC G +G + + C +C C
Sbjct: 1108 LCACADRSGQCSCKANVEGQKCERCKSGSFGLSHRNPL-GCSRCYC 1152
Score = 140 (54.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGP----CVQLDDDQVSNL 57
C+ C +NTGG NC+ C G+Y + + C C C +G CV D+ Q +
Sbjct: 363 CLGCSENTGGINCQSCIDGFYRPSGVSPLEPWPCTPCTCDLRGALHSTCVP-DESQAT-- 419
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC-D 116
T + + S + G R GY F +C C C+ + D
Sbjct: 420 ---TDLPVGSCICKPGYAGERCDRCVF----GY-------AGFPQCERCRCSSDGSVNQD 465
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C+C+++ G +C+RC +G+Y + G V C +C C
Sbjct: 466 PCQPPCVCKEHVEGRDCDRCKQGFY-HLSGGRVRGCDKCYC 505
Score = 133 (51.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 55/209 (26%), Positives = 84/209 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNA-LEGAVTD---CKQCPCPNQGP-CVQLDDDQVSNLGN 59
C C+ NT G++C+RC Y + G C++C C N+ C + V++
Sbjct: 292 CECEHNTCGESCDRCCPAYNQKPWMAGTFLTRHVCEKCNCHNKSEECYY--NQTVADA-- 347
Query: 60 RTRIRIKSAL-GGNRTRGLAL-TRQTHYQ--LTGYHHEPTSGGAFSR--CVPCNCN--G- 110
+ + I GG G + T + Q + G++ P+ C PC C+ G
Sbjct: 348 KLSLNIHGEYEGGGVCLGCSENTGGINCQSCIDGFYR-PSGVSPLEPWPCTPCTCDLRGA 406
Query: 111 -HADICDAES--------GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
H+ ES G CIC+ G+ C+RC GY G C++C C + G
Sbjct: 407 LHSTCVPDESQATTDLPVGSCICKPGYAGERCDRCVFGYAG------FPQCERCRCSSDG 460
Query: 162 PCVQLDDDQ--VVCSECPRGYGGEKMSPG 188
V D Q VC E G ++ G
Sbjct: 461 S-VNQDPCQPPCVCKEHVEGRDCDRCKQG 488
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/191 (27%), Positives = 70/191 (36%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
C C G +CE CA GY + G + C+ C C G + DD LG R
Sbjct: 709 CQCPPGYDGTSCEMCALGY--RRVNGTIYQGVCELCQC--HGHTERCDDLTGHCLGCRDH 764
Query: 63 I------RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-IC 115
+ G+ TRG A Q P A + C +G + IC
Sbjct: 765 TVGPNCGQCAPGYYGDATRGTADDCQPCAC-------PLLSPANNFSPTCRVDGRGEVIC 817
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQCPCP-NQGPCVQLDDDQVV- 172
D C G C+RC+ GY+G + G C+ C C N L D +
Sbjct: 818 DR------CPPGYTGSRCDRCSNGYFGRPNIPGG--SCQPCVCSGNLDQTAPLSCDPLTG 869
Query: 173 -CSECPRGYGG 182
C C +GYGG
Sbjct: 870 ACLRCRKGYGG 880
Score = 126 (49.4 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 22/39 (56%), Positives = 24/39 (61%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
CQ NT GD CERCA G+YG + G DCK C CP P
Sbjct: 1416 CQHNTVGDKCERCAAGFYG-VVRGFTDDCKPCACPLLNP 1453
Score = 98 (39.6 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 28/93 (30%), Positives = 38/93 (40%)
Query: 103 CVPCNC------NGHADICDAESG---RCI-CQDNTGGDNCERCARGYYGNALEGAVTD- 151
C PC C N + C E RC C + G +CERCA G++G+ G +
Sbjct: 1443 CKPCACPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDP--GVLGGR 1500
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C++C C G D +C G G K
Sbjct: 1501 CEECKCDPYGAFPSACDSHSGQCQCRPGASGLK 1533
Score = 95 (38.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHA---DICDAESGRCICQDNTGGDNCERCARGYYGNAL 145
G+H +P G RC C C+ + CD+ SG+C C+ G C++C +
Sbjct: 1489 GFHGDP--GVLGGRCEECKCDPYGAFPSACDSHSGQCQCRPGASGLKCDQCMERHVCGP- 1545
Query: 146 EGAVT---DC 152
EG V+ DC
Sbjct: 1546 EGIVSCDDDC 1555
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 4 RCICQDNTGGDNCERCARGYY-------GNALEGAVTDCKQCPC 40
+C+C G +CE CA G+Y G+A C +C C
Sbjct: 1356 KCVCPQGYAGLSCEECAAGFYRLSVLAGGSASRAGFGSCVRCQC 1399
Score = 42 (19.8 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 156 PCPNQGPCVQLDD-DQVVCSECPRGYGGEKMS------------PG 188
P N P ++D +V+C CP GY G + PG
Sbjct: 799 PANNFSPTCRVDGRGEVICDRCPPGYTGSRCDRCSNGYFGRPNIPG 844
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 239 (89.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/108 (46%), Positives = 65/108 (60%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + S A RCVPCNCNGH++ C SG CI CQ NT G++CERC GYYG+A+ G
Sbjct: 48 GYYRDIKSFPA-GRCVPCNCNGHSNRCQDGSGVCINCQHNTAGEHCERCQEGYYGSAIHG 106
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ CPCP+ C +D V C+ C GY G E+ +PG
Sbjct: 107 S---CRVCPCPHTNSFATGCA-VDGGAVRCA-CKPGYTGAQCERCAPG 149
Score = 176 (67.0 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 46/134 (34%), Positives = 58/134 (43%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT G++CERC GYYG+A+ G+ C+ CPCP+ V G R
Sbjct: 80 CINCQHNTAGEHCERCQEGYYGSAIHGS---CRVCPCPHTNSFAT--GCAVD--GGAVRC 132
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K G + A GY P GG+ C CN NG CD +G C
Sbjct: 133 ACKPGYTGAQCERCA---------PGYFGNPQKFGGSCQPC-NCNSNGQFGTCDPLTGDC 182
Query: 123 ICQDNTGGDNCERC 136
+ Q+ G E C
Sbjct: 183 VSQEPKDGSPAEEC 196
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 89 GYHHEPTSGGAFSRCVPC-NCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNAL 145
GY+ G R PC + N A C + G RC C+ G CERCA GY+GN
Sbjct: 98 GYYGSAIHGSC--RVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQ 155
Query: 146 EGAVTDCKQCPCPNQG 161
+ + C+ C C + G
Sbjct: 156 KFGGS-CQPCNCNSNG 170
Score = 38 (18.4 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 127 NTGGDNCERCA 137
NT GD RCA
Sbjct: 539 NTSGDELVRCA 549
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 219 (82.2 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 64/200 (32%), Positives = 82/200 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT GD CERC G+ + + C CPCP P D + G RT+
Sbjct: 1883 CVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPCPLAVPSNNFADGCILRNG-RTQC 1941
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDA 117
+ G A G+ P G S C PC+C+G+ D CD
Sbjct: 1942 LCRPGYAGASCERCA---------PGFFGNPLVLG--SSCQPCDCSGNGDPNMIFSDCDP 1990
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNAL-EGAVTDCKQCPC------PNQGPCV-QLDD 168
+G C C +T G CE CA G+YGNAL G T C PC P G C+ +
Sbjct: 1991 LTGACRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSPCGTETCDPQTGRCLCKAGV 2050
Query: 169 DQVVCSECPRGYGGEKMSPG 188
C C G+ G + G
Sbjct: 2051 TGQRCDHCLEGHFGFEQCQG 2070
Score = 201 (75.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 44/111 (39%), Positives = 57/111 (51%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + T G RCVPC C+GH+D C SG C+ CQ NT GD CERC G+ +
Sbjct: 1851 GYYRD-TKGLFLGRCVPCQCHGHSDRCLPGSGTCVGCQHNTEGDQCERCRPGFVSSDPSD 1909
Query: 148 AVTDCKQCPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C CPCP P C+ L + + C C GY G E+ +PG
Sbjct: 1910 PASPCVSCPCPLAVPSNNFADGCI-LRNGRTQCL-CRPGYAGASCERCAPG 1958
Score = 178 (67.7 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 57/194 (29%), Positives = 79/194 (40%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C+ CQ +T G NCERC G+Y A + + C+ C C + D +L R
Sbjct: 397 CLDCQHHTTGINCERCVPGFY-RAPDQPLDSPHVCQPCDCESD-----FTDGTCEDLTGR 450
Query: 61 TRIRIKSALGGNRTRGLA--LTRQTH-YQLTGYHHEPTSGGAF--SRCVPCNCNG---HA 112
R G R A H Y L + H T + V C+CN
Sbjct: 451 CYCRPNFT--GERCSACAEGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNAAGTQG 508
Query: 113 DIC--DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
+ C D GRC+C+ N G++CE CA G+YG + C C C + G L D +
Sbjct: 509 NACRKDPRLGRCVCKPNFQGNHCELCAPGFYGPS-------CHPCQCSSPGVANGLCDPE 561
Query: 171 VVCSECPRGYGGEK 184
C G+ G+K
Sbjct: 562 SGQCTCRTGFEGDK 575
Score = 171 (65.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 57/194 (29%), Positives = 82/194 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQ-LDDDQVSNLGNRT 61
RC C+ N G+ C CA GY C P P+ Q L Q+ N
Sbjct: 450 RCYCRPNFTGERCSACAEGYVD------FPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNA 503
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPCNCN--GHAD-ICDA 117
+A + G + + ++Q G H E + G + C PC C+ G A+ +CD
Sbjct: 504 AGTQGNACRKDPRLGRCVCKP-NFQ--GNHCELCAPGFYGPSCHPCQCSSPGVANGLCDP 560
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
ESG+C C+ GD C+ CA GY+ L C+ C C G Q D+ C +C
Sbjct: 561 ESGQCTCRTGFEGDKCDHCALGYFHFPL------CQLCGCSPAGTLPQGCDESGHC-QCR 613
Query: 178 RGYGG---EKMSPG 188
G+ G ++ PG
Sbjct: 614 PGFDGPHCDRCLPG 627
Score = 168 (64.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 52/188 (27%), Positives = 77/188 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+ G +CERCA G++GN L + C+ C C G + D L R
Sbjct: 1940 QCLCRPGYAGASCERCAPGFFGNPLVLG-SSCQPCDCSGNGDPNMIFSD-CDPLTGACRG 1997
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
++ G R A G++ G +RC C+ G + CD ++GRC+
Sbjct: 1998 CLRHTTGP-RCESCA---------PGFYGNALLPGNCTRC-DCSPCG-TETCDPQTGRCL 2045
Query: 124 CQDNTGGDNCERCARGYYG-NALEGAVTDCKQCP------C-PNQGPC-VQLDDDQVVCS 174
C+ G C+ C G++G +G C P C P G C + C
Sbjct: 2046 CKAGVTGQRCDHCLEGHFGFEQCQGC-HPCACGPAAEGSECNPQTGQCHCRPGTTGPQCL 2104
Query: 175 ECPRGYGG 182
EC GY G
Sbjct: 2105 ECAPGYWG 2112
Score = 151 (58.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 47/155 (30%), Positives = 66/155 (42%)
Query: 2 FR-RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQG-PCVQLDDDQVS 55
FR +C CQ NT G +C+RC G+ + A TD C+ C C C D +V
Sbjct: 322 FRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYY--DPEVD 379
Query: 56 NLGNRTRIRIKSALGGNRTRGLALTRQTHYQ-------LTGYHHEPTSG-GAFSRCVPCN 107
N ++ GG G+ L Q H + G++ P + C PC+
Sbjct: 380 RR-NASQNLDNVYQGG----GVCLDCQHHTTGINCERCVPGFYRAPDQPLDSPHVCQPCD 434
Query: 108 CNGH-AD-ICDAESGRCICQDNTGGDNCERCARGY 140
C D C+ +GRC C+ N G+ C CA GY
Sbjct: 435 CESDFTDGTCEDLTGRCYCRPNFTGERCSACAEGY 469
Score = 141 (54.7 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 32/90 (35%), Positives = 46/90 (51%)
Query: 103 CVPCNCNGHAD--ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
C PC C A+ C+ ++G+C C+ T G C CA GY+G +G C++C CP +
Sbjct: 2071 CHPCACGPAAEGSECNPQTGQCHCRPGTTGPQCLECAPGYWGLPEKG----CRRCQCP-R 2125
Query: 161 GPCVQLDDDQVVCSECPRGYGGEKMSPGAQ 190
G C D C+ CP G GE+ +Q
Sbjct: 2126 GHC---DPHTGRCT-CPPGLSGERCDTCSQ 2151
Score = 138 (53.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 40/121 (33%), Positives = 60/121 (49%)
Query: 50 DDDQVSNLGNRTRIRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC 106
D + +N+ R +R + LG G R +TR+ +Y + + + GG RCV
Sbjct: 256 DFTKATNIRLRF-LRTNTLLGHLMGKALRDPTVTRRYYYSIK----DISIGG---RCV-- 305
Query: 107 NCNGHADICDAESG------RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCP 156
C+GHAD+CDA+ +C CQ NT G +C+RC G+ + A TD C+ C
Sbjct: 306 -CHGHADVCDAKDPSDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCN 364
Query: 157 C 157
C
Sbjct: 365 C 365
Score = 126 (49.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 42/158 (26%), Positives = 69/158 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+CIC T +C C +G + C++C C GP VQ D ++ +
Sbjct: 1501 QCICPPRTVPPDCLVCQPQSFGCH---PLVGCEECNC--SGPGVQELTDPTCDMDS---- 1551
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GH-ADICDAESG 120
L +R R R+ G++ P+ C PC+C+ G A +CD +G
Sbjct: 1552 ---GHLCPHRCRPNVAGRRCDTCAPGFYSYPS-------CRPCDCHEAGTMASVCDPFTG 1601
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 157
+C C++N G C++C G + +L+ A C +C C
Sbjct: 1602 QCHCKENVQGSRCDQCRVGTF--SLDAANPKGCTRCFC 1637
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 32/95 (33%), Positives = 42/95 (44%)
Query: 100 FSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
F C C C+ + CD ESG C C+ G +C+RC GY+G DC C
Sbjct: 586 FPLCQLCGCSPAGTLPQGCD-ESGHCQCRPGFDGPHCDRCLPGYHG------YPDCHACA 638
Query: 157 CPNQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
C +G Q +C C GY G ++ SPG
Sbjct: 639 CDPRGSLDQQCGAGGLC-HCRPGYTGATCQECSPG 672
Score = 107 (42.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/107 (28%), Positives = 46/107 (42%)
Query: 83 THYQLTGYHHEPTSGGAFSR-------------CVPCNCNGHADI---CDAESGRCICQD 126
+H GYH P+S F R +PC C+ + C+ G+C C+
Sbjct: 1406 SHCATQGYHISPSSSSLFCRNAATSLSLFYNNGALPCGCHEVGAVGPTCEPFGGQCPCRG 1465
Query: 127 NTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+ G +C RCA GY+G +C+ C C + C +L Q +C
Sbjct: 1466 HVIGRDCSRCATGYWG------FPNCRPCDCGAR-LCDELTG-QCIC 1504
Score = 103 (41.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCP 158
F C PC+C A +CD +G+CIC T +C C +G + L G C++C C
Sbjct: 1482 FPNCRPCDCG--ARLCDELTGQCICPPRTVPPDCLVCQPQSFGCHPLVG----CEECNC- 1534
Query: 159 NQGPCVQ 165
GP VQ
Sbjct: 1535 -SGPGVQ 1540
Score = 103 (41.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 30/108 (27%), Positives = 42/108 (38%)
Query: 88 TGYHHEPTSGG--AFSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYG 142
TG + S G F C+PC+C+ + CD +G+C C+ G C+ C G Y
Sbjct: 662 TGATCQECSPGFYGFPSCIPCHCSADGSMHTTCDPTTGQCRCRPRVTGLRCDMCVPGAYN 721
Query: 143 NAL--EGAVTDCKQCPC----PN-QGPCV-QLDDDQVVCSECPRGYGG 182
G+ P P Q PC + + C C GY G
Sbjct: 722 FPYCEAGSCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGYWG 769
Score = 97 (39.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 27/89 (30%), Positives = 36/89 (40%)
Query: 103 CVPCNCNGHA------DICDAESGR-CI--CQDNTGGDNCERCARGYYGNALEGAVTDCK 153
C CNC+G CD +SG C C+ N G C+ CA G+Y + C+
Sbjct: 1529 CEECNCSGPGVQELTDPTCDMDSGHLCPHRCRPNVAGRRCDTCAPGFY------SYPSCR 1582
Query: 154 QCPCPNQGPCVQLDDD---QVVCSECPRG 179
C C G + D Q C E +G
Sbjct: 1583 PCDCHEAGTMASVCDPFTGQCHCKENVQG 1611
Score = 93 (37.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCV--QLDDDQV 171
C+C N GD+C+ CA GYY + + C C C P G CV Q + +
Sbjct: 1834 CMCPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQCHGHSDRCLPGSGTCVGCQHNTEGD 1893
Query: 172 VCSECPRGY 180
C C G+
Sbjct: 1894 QCERCRPGF 1902
Score = 84 (34.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCV 47
C+C N GD+C+ CA GYY + + C C C P G CV
Sbjct: 1834 CMCPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQCHGHSDRCLPGSGTCV 1884
Score = 84 (34.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 89 GYHHEPTSGGAFSRCVPCNC-NGHADICDAESGRCICQDNTGGDNCERCAR 138
GY P G C C C GH CD +GRC C G+ C+ C++
Sbjct: 2109 GYWGLPEKG-----CRRCQCPRGH---CDPHTGRCTCPPGLSGERCDTCSQ 2151
Score = 74 (31.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C C+ G +C+RC GY+G DC C C +G
Sbjct: 610 CQCRPGFDGPHCDRCLPGYHG------YPDCHACACDPRG 643
Score = 72 (30.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ + G +C RCA GY+G +C+ C C
Sbjct: 1460 QCPCRGHVIGRDCSRCATGYWG------FPNCRPCDC 1490
Score = 63 (27.2 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C+ + G C C G++G L+ A C+ C C
Sbjct: 800 QCFCKAHVCGKTCAACKDGFFG--LDHADYYGCRSCRC 835
Score = 48 (22.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
QCPC +G + D CS C GY G
Sbjct: 1460 QCPC--RGHVIGRD-----CSRCATGYWG 1481
Score = 44 (20.5 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C+ G C+ C G Y
Sbjct: 700 QCRCRPRVTGLRCDMCVPGAY 720
Score = 36 (17.7 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 174 SECPRGYG 181
S CP GYG
Sbjct: 1336 SFCPHGYG 1343
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 222 (83.2 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 45/111 (40%), Positives = 53/111 (47%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
G+ P G C CNCNGHA CD SG C+ CQ T G CE+C G++G+ G
Sbjct: 673 GFERVP--GPYLGICAGCNCNGHASACDPVSGHCLSCQHKTEGAQCEKCKPGFFGDPSRG 730
Query: 148 AVTDCKQCPCPN-------QGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
DCK CPCP C D+Q C C GY G EK +PG
Sbjct: 731 QYDDCKPCPCPYTETSRRFSDTCFLDHDNQATCDACREGYTGRRCEKCAPG 781
Score = 217 (81.4 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 48/109 (44%), Positives = 55/109 (50%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY P G C C C+GHA CD+E+G C+ C NT G CE C GYYGN G
Sbjct: 1066 GYTRTP--GLYLGTCEKCECHGHASSCDSETGDCLNCLHNTIGRRCENCISGYYGNPKTG 1123
Query: 148 AVTDCKQCPC----PNQ-GPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
C+ CPC NQ C D Q VC ECP GY G E+ +PG
Sbjct: 1124 DPQACRPCPCLGQTSNQPSSCYLGSDGQPVC-ECPAGYTGRRCERCAPG 1171
Score = 217 (81.4 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 44/113 (38%), Positives = 58/113 (51%)
Query: 88 TGYHHEPTSGGAF-SRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNAL 145
+GY T GG + C PC CNGH+D C E+G C CQ NT G+ CE+C G++G+
Sbjct: 1464 SGYTR--TGGGLYLGHCEPCECNGHSDTCHPETGICTNCQHNTKGELCEQCVDGFFGDPT 1521
Query: 146 EGAVTDCKQCPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
G DC+ C CP P C L + C+ C GY G E+ +PG
Sbjct: 1522 AGTPEDCQPCACPGTDPENQFSRTCESLGNGGYQCTACQPGYLGQYCERCAPG 1574
Score = 146 (56.5 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 43/160 (26%), Positives = 60/160 (37%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR-TR 62
C+ CQ T G CE+C G++G+ G DCK CPCP + D + N+ T
Sbjct: 704 CLSCQHKTEGAQCEKCKPGFFGDPSRGQYDDCKPCPCPYTETSRRFSDTCFLDHDNQATC 763
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC-----NCNGHADICDA 117
+ G R A GY P +C+P C+ I +
Sbjct: 764 DACREGYTGRRCEKCA---------PGYVGNPLQPNG--KCIPAASPISKCDNRGTI-NP 811
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
S C C+ N G C+ C G + + C QC C
Sbjct: 812 ISKPCYCKSNVAGALCDECKTGAFHLTADNP-EGCLQCFC 850
Score = 137 (53.3 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 47/155 (30%), Positives = 61/155 (39%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C NT G CE C GYYGN G C+ CPC Q Q + + G
Sbjct: 1097 CLNCLHNTIGRRCENCISGYYGNPKTGDPQACRPCPCLGQ-TSNQPSSCYLGSDGQPV-C 1154
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
+ G R A + QL G P S C C+ +G ++ C +G C
Sbjct: 1155 ECPAGYTGRRCERCAPGYIGNPQL-GQRCTPGSNNG--DCYRCDQSG-SEGCSG-TGVCR 1209
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC 157
C+ N G C C +G + L A D C C C
Sbjct: 1210 CKMNVEGPTCSSCKQGTFH--LSPANKDGCLSCFC 1242
Score = 114 (45.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
CQ NT G+ CE+C G++G+ G DC+ C CP P Q +LGN
Sbjct: 1500 CQHNTKGELCEQCVDGFFGDPTAGTPEDCQPCACPGTDPENQFSRT-CESLGN 1551
Score = 74 (31.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 19/56 (33%), Positives = 24/56 (42%)
Query: 136 CARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDDQVVCSECPRGYGGEKMSPGAQ 190
CA GY G+ E C+ C N G CV ++ VC P GY G G +
Sbjct: 3162 CAEGYEGDRCEIVKESCRHSSQCQNGGSCV---NNHCVC---PAGYSGRHCEKGQE 3211
Score = 59 (25.8 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
CK PC N G C C+ C RG+ G
Sbjct: 2879 CKDRPCQNDGTCEDSVASLYKCT-CKRGFTG 2908
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/74 (27%), Positives = 26/74 (35%)
Query: 95 TSGGAFSRC---VPCNCNG--HADICDAESG---RCICQDNTGGDNCERCARG--YYGNA 144
T A S+C PC+ HA C A + +C C + GD CE +
Sbjct: 3125 TESRAISQCNDDSPCDRRPCLHAGTCMATAEYEYQCFCAEGYEGDRCEIVKESCRHSSQC 3184
Query: 145 LEGAVTDCKQCPCP 158
G C CP
Sbjct: 3185 QNGGSCVNNHCVCP 3198
Score = 55 (24.4 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C + PC + G C+ + + C C GY G++
Sbjct: 3139 CDRRPCLHAGTCMATAEYEYQCF-CAEGYEGDR 3170
Score = 47 (21.6 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 14 DNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+ C RC GY G + E ++ P P G C
Sbjct: 654 EEC-RCPAGYSGLSCESCSPGFERVPGPYLGIC 685
Score = 46 (21.3 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC 40
C C G +CE C+ G+ + G C C C
Sbjct: 656 CRCPAGYSGLSCESCSPGF--ERVPGPYLGICAGCNC 690
Score = 37 (18.1 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 173 CSECPRGYGG 182
C+ CP+GY G
Sbjct: 1049 CA-CPQGYSG 1057
Score = 36 (17.7 bits), Expect = 2.1e-18, Sum P(3) = 2.1e-18
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 7 CQDNTGGDNC 16
CQDN+ NC
Sbjct: 264 CQDNSDEMNC 273
>UNIPROTKB|Q16363 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0031012 "extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0030155
GO:GO:0070062 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:foxm1pathway Pfam:PF02210 GO:GO:0045995
GO:GO:0005201 eggNOG:NOG247347 GO:GO:0005606 EMBL:S78569
EMBL:X91171 EMBL:X70904 EMBL:AB210027 EMBL:BT006690 EMBL:Z99289
EMBL:AL590106 EMBL:BC004241 EMBL:Y14240 EMBL:X76939 IPI:IPI00024406
IPI:IPI00329482 IPI:IPI00735310 PIR:S68960 RefSeq:NP_001098676.2
RefSeq:NP_001098677.2 RefSeq:NP_001098678.1 RefSeq:NP_001098679.1
RefSeq:NP_002281.3 UniGene:Hs.654572 ProteinModelPortal:Q16363
SMR:Q16363 IntAct:Q16363 MINT:MINT-1200879 STRING:Q16363
PhosphoSite:Q16363 DMDM:292495093 PaxDb:Q16363 PRIDE:Q16363
DNASU:3910 Ensembl:ENST00000230538 Ensembl:ENST00000368638
Ensembl:ENST00000389463 Ensembl:ENST00000424408
Ensembl:ENST00000453937 Ensembl:ENST00000455073
Ensembl:ENST00000522006 Ensembl:ENST00000578470
Ensembl:ENST00000584877 Ensembl:ENST00000584945 GeneID:3910
KEGG:hsa:3910 UCSC:uc003pvt.2 UCSC:uc003pvu.2 UCSC:uc010kdz.1
CTD:3910 GeneCards:GC06M112475 HGNC:HGNC:6484 HPA:HPA015693
MIM:600133 neXtProt:NX_Q16363 PharmGKB:PA30273 HOVERGEN:HBG052299
InParanoid:Q16363 KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB
PhylomeDB:Q16363 ChiTaRS:LAMA4 GenomeRNAi:3910 NextBio:15351
ArrayExpress:Q16363 Bgee:Q16363 CleanEx:HS_LAMA4
Genevestigator:Q16363 GermOnline:ENSG00000112769 Uniprot:Q16363
Length = 1823
Score = 187 (70.9 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
G+ H T G CVPC+CNG+++ C SG C+ CQ NT G++CE+C GY G+++ G
Sbjct: 70 GFFH--TLSG---ECVPCDCNGNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDSIRG 124
Query: 148 AVTDCKQCPCP-----NQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
A C+ CPCP N + V C C Y G E+ +PG
Sbjct: 125 APQFCQPCPCPLPHLANFAESCYRKNGAVRCI-CNENYAGPNCERCAPG 172
Score = 175 (66.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 48/116 (41%), Positives = 60/116 (51%)
Query: 87 LTGYHHEPTSGGAFSRCVPCNCN-GH----ADICDAESG--RCICQDNTGGDNCERCARG 139
L GY + G A C PC C H A+ C ++G RCIC +N G NCERCA G
Sbjct: 114 LDGYIGDSIRG-APQFCQPCPCPLPHLANFAESCYRKNGAVRCICNENYAGPNCERCAPG 172
Query: 140 YYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVV--CSECPR---GYGGEKMSPG 188
YYGN L T CK+C C N P + +D D+V C C R G+ E+ +PG
Sbjct: 173 YYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPG 227
Score = 145 (56.1 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 37/100 (37%), Positives = 51/100 (51%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI------CDAESGRCI-CQDNTGGDNCERCARGYY 141
GY+ P G S C C+C+G++D CD +G+C C NT G CERCA GYY
Sbjct: 172 GYYGNPLLIG--STCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYY 229
Query: 142 GNALEG---AVTDCKQCPCPN-QGPCVQLDDDQVVCSECP 177
G+A AV +C PC + G C++ + +CP
Sbjct: 230 GDARIAKNCAVCNCGGGPCDSVTGECLEEGFEPPTGMDCP 269
Score = 142 (55.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 46/140 (32%), Positives = 61/140 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVSNLGNRT 61
RCIC +N G NCERCA GYYGN L T CK+C C N P + +D D+V+
Sbjct: 154 RCICNENYAGPNCERCAPGYYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEVTG----- 207
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-ADICDAESG 120
+ ++ L T G R GY+ + C CNC G D E
Sbjct: 208 --QCRNCL--RNTTGFKCERCA----PGYYGDARIA---KNCAVCNCGGGPCDSVTGECL 256
Query: 121 RCICQDNTGGD----NCERC 136
+ TG D +C++C
Sbjct: 257 EEGFEPPTGMDCPTISCDKC 276
Score = 122 (48.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
C+ CQ NT G++CE+C GY G+++ GA C+ CPCP
Sbjct: 98 CVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCP 135
>MGI|MGI:1918264 [details] [associations]
symbol:Megf9 "multiple EGF-like-domains 9" species:10090
"Mus musculus" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001368
SMART:SM00208 MGI:MGI:1918264 GO:GO:0016021 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 CTD:1955 eggNOG:NOG302694
HOVERGEN:HBG080442 EMBL:AK035987 EMBL:AK039319 EMBL:AK052434
EMBL:AK122378 IPI:IPI00221701 RefSeq:NP_766282.1 UniGene:Mm.251188
ProteinModelPortal:Q8BH27 SMR:Q8BH27 STRING:Q8BH27
PhosphoSite:Q8BH27 PaxDb:Q8BH27 PRIDE:Q8BH27
Ensembl:ENSMUST00000107359 GeneID:230316 KEGG:mmu:230316
GeneTree:ENSGT00680000100051 HOGENOM:HOG000203602 InParanoid:Q8BH27
OMA:NGCLPCQ NextBio:379877 Bgee:Q8BH27 CleanEx:MM_MEGF9
Genevestigator:Q8BH27 GermOnline:ENSMUSG00000039270 Uniprot:Q8BH27
Length = 600
Score = 186 (70.5 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP--- 158
C+PC CN +D CD +G C+ CQ+N+ G++CE C G+Y + A C +CPC
Sbjct: 296 CLPCQCNNRSDSCDVHTGACLNCQENSKGEHCEECKEGFYPSP--DAAKQCHRCPCSAVT 353
Query: 159 NQGPC-VQLDDDQVVCSECPRGYGGE 183
+ G C ++ + + C +C GY G+
Sbjct: 354 STGNCTIESGELEPTCDQCKDGYTGQ 379
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 51/188 (27%), Positives = 76/188 (40%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQC-----PCPNQGP-CVQLDDDQVSN 56
C+ CQ N D+C+ G N E + + C++C P P+ C + V++
Sbjct: 296 CLPCQCNNRSDSCD-VHTGACLNCQENSKGEHCEECKEGFYPSPDAAKQCHRCPCSAVTS 354
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGHAD 113
GN T I+S G + + TG + G + S C C C+GH D
Sbjct: 355 TGNCT---IES---GELEPTCDQCKDGY---TGQNCNKCENGYYNSDSICTQCECHGHVD 405
Query: 114 ------ICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
IC ESG CI C NT G CE+C GY + + P P +G + +
Sbjct: 406 PIKTPKICKPESGECINCLHNTTGFWCEKCLEGYVRDLQRNCIKQEVIVPTP-EGSTILV 464
Query: 167 DDDQVVCS 174
+ + S
Sbjct: 465 SNASLTTS 472
Score = 120 (47.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 27/91 (29%), Positives = 42/91 (46%)
Query: 103 CVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C+PC+C+ H + C++ SG C C+ G C++C G+YG G C C C N
Sbjct: 249 CLPCHCSPHGAVSILCNS-SGNCQCKVGVTGSMCDKCQDGHYGFGKTG----CLPCQCNN 303
Query: 160 Q--------GPCVQLDDDQVV--CSECPRGY 180
+ G C+ ++ C EC G+
Sbjct: 304 RSDSCDVHTGACLNCQENSKGEHCEECKEGF 334
Score = 68 (29.0 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 43
C C+ G C++C G+YG G C C C N+
Sbjct: 270 CQCKVGVTGSMCDKCQDGHYGFGKTG----CLPCQCNNR 304
Score = 60 (26.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C G +C+ C G+Y N G C C C G
Sbjct: 221 QCDCHVGYQGLHCDTCKEGFYLNHTVGL---CLPCHCSPHG 258
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 222 (83.2 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 64/196 (32%), Positives = 83/196 (42%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT GD+CE+C GY G+ C CPCP V G+ T+
Sbjct: 1857 CLNCQHNTEGDHCEQCKDGYVGSRNADGSLQCVGCPCPLSVASNNFAIGCVHK-GSSTQC 1915
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD------ICDA 117
K G A GY+ P G S C PC+C+G+ D CD+
Sbjct: 1916 LCKPGYAGPNCERCA---------PGYYGNPLVIG--SSCQPCDCSGNTDPNMLFSSCDS 1964
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQC---PC------PNQGPCV-QL 166
+G C+ C +T G CE CA G+YG+A+ A +C QC PC P G C +
Sbjct: 1965 LTGTCMGCMHHTAGVRCEVCAPGFYGDAV--AAKNCTQCNCSPCGTDSCHPQTGQCFCKA 2022
Query: 167 DDDQVVCSECPRGYGG 182
C C GY G
Sbjct: 2023 GVTGQHCDHCEEGYYG 2038
Score = 195 (73.7 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 44/111 (39%), Positives = 56/111 (50%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + T G +C+PC+CNGH+D C SG C+ CQ NT GD+CE+C GY G+
Sbjct: 1825 GYYRD-TKGLFLGKCIPCHCNGHSDQCLPGSGICLNCQHNTEGDHCEQCKDGYVGSRNAD 1883
Query: 148 AVTDCKQCPCP-----NQGP--CVQLDDDQVVCSECPRGYGG---EKMSPG 188
C CPCP N CV C C GY G E+ +PG
Sbjct: 1884 GSLQCVGCPCPLSVASNNFAIGCVH-KGSSTQCL-CKPGYAGPNCERCAPG 1932
Score = 179 (68.1 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 56/190 (29%), Positives = 80/190 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDDDQVSNLGNRTR 62
+C+C+ G NCERCA GYYGN L + C+ C C N P + S+ + T
Sbjct: 1914 QCLCKPGYAGPNCERCAPGYYGNPLVIG-SSCQPCDCSGNTDPNMLF-----SSCDSLTG 1967
Query: 63 IRIKSALGG-NRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADICDAESG 120
+ +G + T G+ + G++ + A C CNC+ D C ++G
Sbjct: 1968 ----TCMGCMHHTAGV----RCEVCAPGFYGDAV---AAKNCTQCNCSPCGTDSCHPQTG 2016
Query: 121 RCICQDNTGGDNCERCARGYYG-NALEGAVT-DCKQ----CPCPNQ-GPCVQLDD-DQVV 172
+C C+ G +C+ C GYYG G DC C Q G C L
Sbjct: 2017 QCFCKAGVTGQHCDHCEEGYYGFEGCSGCRRCDCDVGAMGSSCHAQTGQCHCLPGVSGSR 2076
Query: 173 CSECPRGYGG 182
C +C GY G
Sbjct: 2077 CQQCAPGYWG 2086
Score = 150 (57.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 47/165 (28%), Positives = 73/165 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC---PNQGPCVQLDDDQVSNLGNR 60
RC C+ N G++C CA GY L+ C P + G V L Q+ N
Sbjct: 428 RCYCKPNYTGEHCNACAEGY----LD--FPHCYPVPAFAYNDTGEQV-LPAGQIINCDCY 480
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCNG---HADICD 116
+A + G+ + + ++Q G H + + G + C PC C+G + CD
Sbjct: 481 AGGTEGNACRKDPRVGMCVCKP-NFQ--GTHCDQCTPGHYGPLCQPCQCSGPGQYDGTCD 537
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
+E+G+C+C+ G C+RCA GY+ L C+ C C G
Sbjct: 538 SETGQCLCRTGFEGQLCDRCAPGYFNYPL------CQLCGCSAVG 576
Score = 147 (56.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 42/150 (28%), Positives = 65/150 (43%)
Query: 4 RCICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
+C CQ NT G +C+RC G+ + A + +C+ C C D + + +
Sbjct: 303 QCDCQHNTCGGSCDRCCPGFNQFPWKPATADSANECQPCNCNGHAYDCYYDPEVDRHKAS 362
Query: 60 RTRIRIKSALGG------NRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCNGH- 111
++R K GG + T G+ R + GY+ P + C CNC
Sbjct: 363 KSR-EDKFEGGGVCIDCQHHTTGVNCERC----IPGYYRSPDHPIDSPYICYRCNCKSDF 417
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGY 140
D C+ +GRC C+ N G++C CA GY
Sbjct: 418 TDGTCEDLTGRCYCKPNYTGEHCNACAEGY 447
Score = 140 (54.3 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 55/203 (27%), Positives = 81/203 (39%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
CI CQ +T G NCERC GYY + ++ C +C C + D +L R
Sbjct: 375 CIDCQHHTTGVNCERCIPGYYRSPDHPIDSPYI-CYRCNCKSD-----FTDGTCEDLTGR 428
Query: 61 TRIRIKSALGGNRTRGLA---LTRQTHYQLTGYHHEPTSGGAF--SRCVPCNC-----NG 110
K G A L Y + + + T + + C+C G
Sbjct: 429 CYC--KPNYTGEHCNACAEGYLDFPHCYPVPAFAYNDTGEQVLPAGQIINCDCYAGGTEG 486
Query: 111 HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ--GPCVQLDD 168
+A D G C+C+ N G +C++C G+YG + C QC P Q G C D
Sbjct: 487 NACRKDPRVGMCVCKPNFQGTHCDQCTPGHYGPLCQ----PC-QCSGPGQYDGTC---DS 538
Query: 169 DQVVCSECPRGYGGE---KMSPG 188
+ C C G+ G+ + +PG
Sbjct: 539 ETGQCL-CRTGFEGQLCDRCAPG 560
Score = 127 (49.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 69 LGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG------RC 122
L G R +TR+ +Y + + + GG RCV C+GHAD+CDA+ +C
Sbjct: 255 LMGKALRDPTVTRRYYYSIK----DISIGG---RCV---CHGHADVCDAKDPSDPYRLQC 304
Query: 123 ICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPC 157
CQ NT G +C+RC G+ + A + +C+ C C
Sbjct: 305 DCQHNTCGGSCDRCCPGFNQFPWKPATADSANECQPCNC 343
Score = 121 (47.7 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 32/105 (30%), Positives = 49/105 (46%)
Query: 87 LTGYHHEPTSGGAF-----SRCVPCNCNGHA--DICDAESGRCICQDNTGGDNCERCARG 139
+TG H + G + S C C+C+ A C A++G+C C G C++CA G
Sbjct: 2024 VTGQHCDHCEEGYYGFEGCSGCRRCDCDVGAMGSSCHAQTGQCHCLPGVSGSRCQQCAPG 2083
Query: 140 YYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
Y+G + G C++C C G C D C+ C G G++
Sbjct: 2084 YWGFSERG----CRKCECRG-GSC---DPRTGECT-CSNGLTGKQ 2119
Score = 113 (44.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 103 CVPCNCN--GHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+ G ++ CD +SG+C C+ N G C+ CA GYY C++C
Sbjct: 1506 CEDCNCSQPGVQELTELGCDVDSGQCKCKPNVIGRRCDLCAPGYYH------YPSCRRCD 1559
Query: 157 CPNQGPCVQLDDDQVVCSEC 176
C G V + D V +C
Sbjct: 1560 CHPDGTEVSVCDP--VTGQC 1577
Score = 104 (41.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 33/125 (26%), Positives = 58/125 (46%)
Query: 35 CKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEP 94
C+ C C G VQ +++ LG + S G + + + R+ GY+H P
Sbjct: 1506 CEDCNCSQPG--VQ----ELTELG----CDVDS--GQCKCKPNVIGRRCDLCAPGYYHYP 1553
Query: 95 TSGGAFSRCVPCNCNG-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VTDC 152
+ RC C+ +G +CD +G+C C++N G C++C G + +L+ + C
Sbjct: 1554 SC----RRC-DCHPDGTEVSVCDPVTGQCHCKENVEGPRCDQCRLGTF--SLDASNPKGC 1606
Query: 153 KQCPC 157
+C C
Sbjct: 1607 TKCFC 1611
Score = 103 (41.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 27/90 (30%), Positives = 39/90 (43%)
Query: 105 PCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ- 160
PC C+ C+ G+C C+ N G C RCA GY+G +C+ C C +
Sbjct: 1418 PCQCHEAGARGSQCEPFGGQCPCKSNVIGRECSRCATGYWG------FPNCRPCDCGTRL 1471
Query: 161 -----GPCV----QLDDDQVVCSECPRGYG 181
G C+ L + VVC P+ +G
Sbjct: 1472 CDEVTGQCICPPHTLKPECVVCE--PQTFG 1499
Score = 100 (40.3 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCV--QLDDDQV 171
C C N GD+C+ CA GYY + + C C C P G C+ Q + +
Sbjct: 1808 CFCPANYLGDSCQECAPGYYRDTKGLFLGKCIPCHCNGHSDQCLPGSGICLNCQHNTEGD 1867
Query: 172 VCSECPRGYGGEKMSPGA 189
C +C GY G + + G+
Sbjct: 1868 HCEQCKDGYVGSRNADGS 1885
Score = 77 (32.2 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C+ N G C RCA GY+G +C+ C C
Sbjct: 1437 QCPCKSNVIGRECSRCATGYWG------FPNCRPCDC 1467
Score = 73 (30.8 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
+C C+ N G C+ CA GYY C++C C G V + D
Sbjct: 1530 QCKCKPNVIGRRCDLCAPGYYH------YPSCRRCDCHPDGTEVSVCD 1571
Score = 68 (29.0 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C+ NT G C C GY+ ++E C+ C C
Sbjct: 777 QCFCKPNTCGQFCSACKDGYF--SMENTNYFGCQGCRC 812
Score = 68 (29.0 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
RC C+ G CE+C+ G++ + C C C ++G
Sbjct: 587 RCFCKAEFAGPRCEQCSSGHH------SYPHCYACSCDSRG 621
Score = 63 (27.2 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 14/52 (26%), Positives = 20/52 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSN 56
C C+ G C+RC + Y N C C C +G + + Q N
Sbjct: 725 CACRAYVEGPACDRC-KPLYWNLTPDNPYGCTSCKCETKGTISGIAECQQGN 775
Score = 60 (26.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C++N G C++C G + +L+ + C +C C
Sbjct: 1576 QCHCKENVEGPRCDQCRLGTF--SLDASNPKGCTKCFC 1611
Score = 51 (23.0 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYG 25
+C C+ G C+ C G YG
Sbjct: 678 QCSCRPKVTGLRCDSCVPGAYG 699
Score = 49 (22.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 5 CICQDNTGGDNCERCARGYY 24
C C+ NT G C + R +Y
Sbjct: 829 CRCRQNTRGPTCTQPVRDHY 848
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 16/56 (28%), Positives = 21/56 (37%)
Query: 127 NTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
N G C+ G G+ E QCPC + + + CS C GY G
Sbjct: 1413 NNGAQPCQCHEAGARGSQCEPFGG---QCPCKSN--VIGRE-----CSRCATGYWG 1458
Score = 39 (18.8 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC-PN 42
C G ++C C++ E G D QC C PN
Sbjct: 1500 CHPLIGCEDCN-CSQPGVQELTELGCDVDSGQCKCKPN 1536
Score = 35 (17.4 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 7 CQDNTGGDNCERCARG 22
C++ +G C + RG
Sbjct: 822 CEERSGACRCRQNTRG 837
Score = 35 (17.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 176 CPRGYG 181
CP GYG
Sbjct: 1315 CPHGYG 1320
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 218 (81.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 46/112 (41%), Positives = 59/112 (52%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC-ICQDNTGGDNCERCARGYYGNALE 146
TGY P SG C CNC+GH++ C+ E+G C CQ +T G +CE+C GYYG+A
Sbjct: 1142 TGYTRVP-SGLYLGTCERCNCHGHSETCEPETGACQSCQHHTEGASCEQCQPGYYGDAQR 1200
Query: 147 GAVTDCKQCPC---PNQGPCVQ---LDDD-QVVCSECPRGYGG---EKMSPG 188
G DC+ CPC P G LD D C C G+ G E+ +PG
Sbjct: 1201 GTPQDCQPCPCYGAPAAGQAAHTCFLDTDGHPTCDSCSPGHSGRHCERCAPG 1252
Score = 217 (81.4 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 44/104 (42%), Positives = 54/104 (51%)
Query: 96 SGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG +C C CNGH+D+C E+G C CQ NT G+ CE CA GYYG+A G DC+
Sbjct: 1553 SGLYLGQCELCECNGHSDLCHPETGACSRCQHNTAGEFCELCATGYYGDATAGTPEDCQP 1612
Query: 155 CPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
C CP P C L C+ C GY G E+ +PG
Sbjct: 1613 CACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPG 1656
Score = 212 (79.7 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 42/110 (38%), Positives = 52/110 (47%)
Query: 91 HHEPTSGGAF-SRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGA 148
H GG + C CNCNGHA CD G C+ CQ NT G C++C G++G+A +
Sbjct: 748 HFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGPQCDKCKPGFFGDATKAT 807
Query: 149 VTDCKQCPCPN-------QGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
T C+ CPCP C D Q C C GY G E +PG
Sbjct: 808 ATACRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPG 857
Score = 158 (60.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 49/166 (29%), Positives = 66/166 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC---PNQGPCVQ---LDDDQVSNLGNR 60
CQ +T G +CE+C GYYG+A G DC+ CPC P G LD D G+
Sbjct: 1178 CQHHTEGASCEQCQPGYYGDAQRGTPQDCQPCPCYGAPAAGQAAHTCFLDTD-----GHP 1232
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG------GAFSRCVPCNCNGHADI 114
T G A GY+ P+ G G + C C+ H I
Sbjct: 1233 TCDSCSPGHSGRHCERCA---------PGYYGNPSQGQPCHRDGQVPEVLGCGCDPHGSI 1283
Query: 115 ---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
CDA +G+C C+ G +C C R ++ + C C C
Sbjct: 1284 SSQCDA-AGQCQCKAQVEGRSCSHC-RPHHFHLSASNPEGCLPCFC 1327
Score = 139 (54.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 42/165 (25%), Positives = 64/165 (38%)
Query: 1 MFRRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-G 58
++ C+ CQ NT G C++C G++G+A + T C+ CPCP + D + G
Sbjct: 776 VYGHCLNCQHNTEGPQCDKCKPGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTDG 835
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCN-----CNGHAD 113
T G R A GY P G +C P C+
Sbjct: 836 QATCDACAPGYTGRRCESCA---------PGYEGNPIQPGG--KCRPTTQEIVRCDERGS 884
Query: 114 ICDAESGR-CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+ SG C C++N G C C+ G + + + C +C C
Sbjct: 885 L--GTSGETCRCKNNVVGRLCNECSDGSFHLSKQNP-DGCLKCFC 926
Score = 127 (49.8 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
CQ NT G+ CE CA GYYG+A G DC+ C CP P
Sbjct: 1582 CQHNTAGEFCELCATGYYGDATAGTPEDCQPCACPLTNP 1620
Score = 111 (44.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 38/148 (25%), Positives = 57/148 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR- 62
+C C G +C+ C GY + C++C C + + + + T
Sbjct: 1125 QCTCPPGYRGPSCQDCDTGYTRVPSGLYLGTCERCNCHGHSETCEPETGACQSCQHHTEG 1184
Query: 63 ---IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+ + G+ RG T Q Y P +G A C + +GH CD+
Sbjct: 1185 ASCEQCQPGYYGDAQRG---TPQDCQPCPCYG-APAAGQAAHTCF-LDTDGHPT-CDS-- 1236
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEG 147
C G +CERCA GYYGN +G
Sbjct: 1237 ----CSPGHSGRHCERCAPGYYGNPSQG 1260
Score = 71 (30.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 31/91 (34%), Positives = 38/91 (41%)
Query: 105 PCNCNGHADICDAE-SGRCICQDNTGGDNCERCARG--YYGNALEGAVTDCKQCPC-PN- 159
PC NG + E +C+CQD GD CE + L G +C C P
Sbjct: 3429 PCR-NGATCMPAGEYEFQCLCQDGFKGDLCEHEENPCQLHEPCLNGGTCRGARCLCLPGF 3487
Query: 160 QGP-CVQLDDDQVVCSEC-PRGYGGEKMSPG 188
GP C Q VV S+ P G GG +PG
Sbjct: 3488 SGPRCQQGAGYGVVESDWHPEGSGGND-APG 3517
Score = 59 (25.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C+ PC N G C + C CP G+
Sbjct: 3166 CQDRPCQNGGQCQDSESSSYTCV-CPAGF 3193
Score = 54 (24.1 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 28/98 (28%), Positives = 37/98 (37%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G +C C R ++ + C C C G Q S R I
Sbjct: 1292 QCQCKAQVEGRSCSHC-RPHHFHLSASNPEGCLPCFC--MGVTQQCASSSYS----RQLI 1344
Query: 64 RIKSALGGNRTRGLALTR-QTHYQLTG-YHHEPTSGGA 99
A G +G AL Q + QLTG + EP GA
Sbjct: 1345 STHFAPGD--FQGFALVNPQRNSQLTGGFTVEPVHDGA 1380
Score = 49 (22.3 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
C++ PC N C+ + + C C G+ G+
Sbjct: 3425 CERQPCRNGATCMPAGEYEFQCL-CQDGFKGD 3455
Score = 47 (21.6 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 16/55 (29%), Positives = 21/55 (38%)
Query: 136 CARGYYGNALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
C G+ G+ E C+ PC N G C C C G+ G + GA
Sbjct: 3448 CQDGFKGDLCEHEENPCQLHEPCLNGGTC-----RGARCL-CLPGFSGPRCQQGA 3496
Score = 39 (18.8 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 105 PCNCNGHADICDAESGRCIC 124
PC G ++ S C+C
Sbjct: 3170 PCQNGGQCQDSESSSYTCVC 3189
Score = 38 (18.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C C G +CE C ++ G + C C C
Sbjct: 731 CRCPIGYSGLSCESCD-AHFTRVPGGPYLGTCSGCNC 766
Score = 36 (17.7 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 10/47 (21%), Positives = 18/47 (38%)
Query: 16 CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
C C + ++ + C C +GP Q D + G+ T+
Sbjct: 761 CSGCNCNGHASSCDPVYGHCLNCQHNTEGP--QCDKCKPGFFGDATK 805
Score = 35 (17.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 92 HEPTSGGAFSRCVPCNC 108
HEP G R C C
Sbjct: 3467 HEPCLNGGTCRGARCLC 3483
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 180 (68.4 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 44/111 (39%), Positives = 55/111 (49%)
Query: 84 HYQLTGYHHEPTSGG--AFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGY 140
H +++G + G F C PC CN A++CD E+G C C T G NCERC GY
Sbjct: 839 HGEVSGRRCDRCLAGYFGFPSCHPCPCNRFAELCDPETGSCFNCGGFTTGRNCERCIDGY 898
Query: 141 YGNALEGAVTDCKQCPCP-----NQ---GPCVQ-LDDDQVVCSECPRGYGG 182
YGN G C+ C CP NQ C Q L V+C+ C +GY G
Sbjct: 899 YGNPSSGQ--PCRPCLCPDDPSSNQYFAHSCYQNLWSSDVICN-CLQGYTG 946
Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/187 (29%), Positives = 73/187 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNA-LEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C C G C C+ G+YGN + GA C+ C C N D + S +
Sbjct: 938 CNCLQGYTGTQCGECSTGFYGNPRISGA--PCQPCACNNNIDVT--DPESCSRVTGECLR 993
Query: 64 RIKSALGGNRTRGLALTRQTHY-QLTGYHHEPTSGGAFSRCVPCNC--NGHADICDAESG 120
+ + G N L + HY S A S P C G A +CD +G
Sbjct: 994 CLHNTQGAN----CQLCKPGHYGSALNQTCRRCSCHA-SGVSPMECPPGGGACLCDPVTG 1048
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLDDDQVVCSECPRG 179
C C N G C+RCA GY+ N + G C+ C C P D C C G
Sbjct: 1049 ACPCLPNVTGLACDRCADGYW-NLVPGR--GCQSCDCDPRTSQSSHCDQLTGQCP-CKLG 1104
Query: 180 YGGEKMS 186
YGG++ S
Sbjct: 1105 YGGKRCS 1111
Score = 162 (62.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 46/165 (27%), Positives = 72/165 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPCPNQGP-----CVQLDDDQVSNLG 58
CQ NT G +C+RC +Y + L+ ++D C C C G CV D + ++
Sbjct: 362 CQHNTEGQHCDRCRPLFYRDPLK-TISDPYACIPCECDPDGTISGGICVSHSDPALGSVA 420
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
+ + ++ G + + HY L+ +P C PC+CN +
Sbjct: 421 GQCLCK-ENVEGAKCDQ----CKPNHYGLSAT--DPLG------CQPCDCNPLGSLPFLT 467
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYG--NALEGAVTDCKQCPC 157
CD ++G+C+C G +CE C GY+G N L G C C C
Sbjct: 468 CDVDTGQCLCLSYVTGAHCEECTVGYWGLGNHLHG----CSPCDC 508
Score = 126 (49.4 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 31/97 (31%), Positives = 38/97 (39%)
Query: 103 CVPCNCN--GHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-- 157
C PC+C+ G D +CD +G+C C G C+RC GY+G C CPC
Sbjct: 814 CHPCHCHPQGSKDTVCDQVTGQCPCHGEVSGRRCDRCLAGYFG------FPSCHPCPCNR 867
Query: 158 ------PNQGPCVQLDDDQVV--CSECPRGYGGEKMS 186
P G C C C GY G S
Sbjct: 868 FAELCDPETGSCFNCGGFTTGRNCERCIDGYYGNPSS 904
Score = 125 (49.1 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 102 RCVPCNCN--G-HADICDAESGRCICQDNTGGDNCERCARGY 140
RC+PC+CN G ICD ++G C C++ G C+RCARG+
Sbjct: 1124 RCIPCDCNRAGTQKPICDPDTGMCRCREGVSGQRCDRCARGH 1165
Score = 111 (44.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 26/86 (30%), Positives = 37/86 (43%)
Query: 103 CVPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C C+C+ + CD +G+C C+ GG C C YYG+ G C C C
Sbjct: 1077 CQSCDCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSECQENYYGDP-PGR---CIPCDCNR 1132
Query: 160 QGPCVQL-DDDQVVCSECPRGYGGEK 184
G + D D +C C G G++
Sbjct: 1133 AGTQKPICDPDTGMC-RCREGVSGQR 1157
Score = 98 (39.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 108 CNGHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG--PCV 164
C H+D + +G+C+C++N G C++C +YG + + C+ C C G P +
Sbjct: 408 CVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPL-GCQPCDCNPLGSLPFL 466
Query: 165 QLDDD--QVVC---------SECPRGYGG 182
D D Q +C EC GY G
Sbjct: 467 TCDVDTGQCLCLSYVTGAHCEECTVGYWG 495
Score = 88 (36.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 23/74 (31%), Positives = 33/74 (44%)
Query: 103 CVPCNCNGHADICDAE-----------SGRCI-CQDNTGGDNCERCARGYYGNALEGAVT 150
C C+CN H+ C + G C CQ NT G +C+RC +Y + L+ ++
Sbjct: 329 CRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLK-TIS 387
Query: 151 D---CKQCPCPNQG 161
D C C C G
Sbjct: 388 DPYACIPCECDPDG 401
Score = 88 (36.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 23/77 (29%), Positives = 31/77 (40%)
Query: 104 VPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
V C C+ + C G+C C+ G C+RC+ G Y G C C C Q
Sbjct: 767 VACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHG----CHPCHCHPQ 822
Query: 161 GPCVQLDDDQVVCSECP 177
G + D V +CP
Sbjct: 823 GSKDTVCDQ--VTGQCP 837
Score = 84 (34.6 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD-----CKQCPC 40
+C+CQ NT G NCERC + ++ +A D C+ C C
Sbjct: 294 QCVCQHNTDGPNCERC-KDFFQDAPWRPAADLQDNACRSCSC 334
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 153 KQCPCPNQGPCVQLDDDQVVCS 174
K C P PCV L +C+
Sbjct: 1374 KVCGDPGNVPCVPLPCGGALCT 1395
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 234 (87.4 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 50/108 (46%), Positives = 65/108 (60%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + S A R VPCNCNGH++ C SG CI CQ NT G++CERC RGYYG+A+ G
Sbjct: 62 GYYRDIKSFPA-GRSVPCNCNGHSNRCQDGSGVCINCQHNTAGEHCERCKRGYYGSAIHG 120
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ CPCP+ C +D V C+ C GY G E+ +PG
Sbjct: 121 S---CRVCPCPHTNSFATGCA-VDGGAVRCA-CKPGYTGAQCERCAPG 163
Score = 181 (68.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 47/134 (35%), Positives = 59/134 (44%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT G++CERC RGYYG+A+ G+ C+ CPCP+ V G R
Sbjct: 94 CINCQHNTAGEHCERCKRGYYGSAIHGS---CRVCPCPHTNSFAT--GCAVD--GGAVRC 146
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K G + A GY P GG+ C CN NG CD +G C
Sbjct: 147 ACKPGYTGAQCERCA---------PGYFGNPQKFGGSCQPC-NCNSNGQFGTCDPLTGDC 196
Query: 123 ICQDNTGGDNCERC 136
+ Q+ G E C
Sbjct: 197 VSQEPKDGSPAEEC 210
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 27/76 (35%), Positives = 36/76 (47%)
Query: 89 GYHHEPTSGGAFSRCVPC-NCNGHADICDAESG--RCICQDNTGGDNCERCARGYYGNAL 145
GY+ G R PC + N A C + G RC C+ G CERCA GY+GN
Sbjct: 112 GYYGSAIHGSC--RVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQ 169
Query: 146 EGAVTDCKQCPCPNQG 161
+ + C+ C C + G
Sbjct: 170 KFGGS-CQPCNCNSNG 184
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 179 (68.1 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 42/111 (37%), Positives = 55/111 (49%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
G++ + G RCVPC C+GH+D C SG C+ CQ NT G +CERC G+ + +
Sbjct: 1848 GFYRD-VKGLFLGRCVPCQCHGHSDRCLPGSGVCVDCQHNTEGAHCERCQAGFVSSR-DD 1905
Query: 148 AVTDCKQCPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
C CPCP P CV L + C C GY G E+ +PG
Sbjct: 1906 PSAPCVSCPCPLSVPSNNFAEGCV-LRGGRTQCL-CKPGYAGASCERCAPG 1954
Score = 167 (63.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 54/187 (28%), Positives = 73/187 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+ G +CERCA G++GN L + C+ C C G L D L R
Sbjct: 1936 QCLCKPGYAGASCERCAPGFFGNPLVLG-SSCQPCDCSGNGDPNLLFSD-CDPLTGACRG 1993
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
++ G R A G++ G +RC C A CD SG C+
Sbjct: 1994 CLRHTTGP-RCEICA---------PGFYGNALLPGNCTRCDCTPCGTEA--CDPHSGHCL 2041
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCP------C-PNQGPC-VQLDDDQVVCSE 175
C+ G C+RC G++G G C P C P G C + C E
Sbjct: 2042 CKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGSECHPQSGQCHCRPGTMGPQCRE 2101
Query: 176 CPRGYGG 182
C GY G
Sbjct: 2102 CAPGYWG 2108
Score = 157 (60.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 58/193 (30%), Positives = 80/193 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYG----NALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
RC C+ N G+ C+ CA G+ G + D ++ P G V D GN
Sbjct: 446 RCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLP-AGQIVNCDCSAAGTQGN 504
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHADI-C 115
R K G R L + ++Q G H E + G + C PC C+ G AD C
Sbjct: 505 ACR---KDPRVG---RCLC---KPNFQ--GTHCELCAPGFYGPGCQPCQCSSPGVADDRC 553
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC---P--CPNQGPCV-QLDDD 169
D ++G+C C+ G C+RCA GY+ L + C P C G C+ Q +
Sbjct: 554 DPDTGQCRCRVGFEGATCDRCAPGYFHFPL-CQLCGCSPAGTLPEGCDEAGRCLCQPEFA 612
Query: 170 QVVCSECPRGYGG 182
C C GY G
Sbjct: 613 GPHCDRCRPGYHG 625
Score = 156 (60.0 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 56/198 (28%), Positives = 78/198 (39%)
Query: 5 CI-CQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPCPNQ---GPCVQLDDDQVSNL 57
CI CQ +T G NCERC G+Y + L+ C++C C + G C L
Sbjct: 393 CIDCQHHTTGVNCERCLPGFYRSPNHPLDSPHV-CRRCNCESDFTDGTCEDLTGRCYCR- 450
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADIC- 115
N + R G G T + G C C+ G + C
Sbjct: 451 PNFSGERCDVCAEG--FTGFPSCYPTPSSSNDTREQVLPAGQIVNC-DCSAAGTQGNACR 507
Query: 116 -DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVVC 173
D GRC+C+ N G +CE CA G+YG C+ C C + G + D D C
Sbjct: 508 KDPRVGRCLCKPNFQGTHCELCAPGFYGPG-------CQPCQCSSPGVADDRCDPDTGQC 560
Query: 174 SECPRGYGG---EKMSPG 188
C G+ G ++ +PG
Sbjct: 561 -RCRVGFEGATCDRCAPG 577
Score = 150 (57.9 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 46/158 (29%), Positives = 67/158 (42%)
Query: 2 FR-RCICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGP-CVQLDDDQVS 55
FR +C CQ NT G C+RC G+ + A + +C+ C C C D +V
Sbjct: 318 FRLQCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANECQSCNCYGHATDCYY--DPEVD 375
Query: 56 NLGNRTRIRIKSALGGN-RTRGLALTRQTHYQ-------LTGYHHEPTSG-GAFSRCVPC 106
R R +L G + G+ + Q H L G++ P + C C
Sbjct: 376 ------RRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNHPLDSPHVCRRC 429
Query: 107 NCNGH-AD-ICDAESGRCICQDNTGGDNCERCARGYYG 142
NC D C+ +GRC C+ N G+ C+ CA G+ G
Sbjct: 430 NCESDFTDGTCEDLTGRCYCRPNFSGERCDVCAEGFTG 467
Score = 144 (55.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 33/90 (36%), Positives = 44/90 (48%)
Query: 103 CVPCNCNGHAD--ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
C PC C A+ C +SG+C C+ T G C CA GY+G +G C++C CP
Sbjct: 2067 CRPCACGPAAEGSECHPQSGQCHCRPGTMGPQCRECAPGYWGLPEQG----CRRCQCPG- 2121
Query: 161 GPCVQLDDDQVVCSECPRGYGGEKMSPGAQ 190
G C D C+ CP G GE+ +Q
Sbjct: 2122 GRC---DPHTGRCN-CPPGLSGERCDTCSQ 2147
Score = 139 (54.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 45/180 (25%), Positives = 72/180 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDDDQVSNLGNRTRI 63
C+C + GD+C+ CA G+Y + + C C C C+ G+ +
Sbjct: 1831 CLCPASYRGDSCQECAPGFYRDVKGLFLGRCVPCQCHGHSDRCLP---------GSGVCV 1881
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRC-VPCNCNGHADICDAESGR- 121
+ + T G A + +P++ C + N A+ C GR
Sbjct: 1882 DCQ-----HNTEG-AHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRT 1935
Query: 122 -CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG-PCVQLDDDQVVCSECPRG 179
C+C+ G +CERCA G++GN L + C+ C C G P + D + C RG
Sbjct: 1936 QCLCKPGYAGASCERCAPGFFGNPLVLG-SSCQPCDCSGNGDPNLLFSDCDPLTGAC-RG 1993
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/95 (34%), Positives = 46/95 (48%)
Query: 100 FSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
F C C C+ + CD E+GRC+CQ G +C+RC GY+G +C+ C
Sbjct: 581 FPLCQLCGCSPAGTLPEGCD-EAGRCLCQPEFAGPHCDRCRPGYHG------FPNCQACT 633
Query: 157 CPNQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
C +G QL +C C GY G ++ SPG
Sbjct: 634 CDPRGALDQLCGAGGLC-RCRPGYTGTACQECSPG 667
Score = 128 (50.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 63 IRIKSALG---GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+R + LG G R +TR+ +Y + + + GG RCV C+GHAD CDA+
Sbjct: 264 LRTNTLLGHLMGKALRDPTVTRRYYYSIK----DISIGG---RCV---CHGHADACDAKD 313
Query: 120 G------RCICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPC 157
+C CQ NT G C+RC G+ + A + +C+ C C
Sbjct: 314 PTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANECQSCNC 361
Score = 119 (46.9 bits), Expect = 8.3e-09, Sum P(2) = 8.3e-09
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 87 LTGYHHEPTSGG--AFSRCVPCNCN--GHAD-ICDAESGRCICQDNTGGDNCERCARGYY 141
+TG + S G + RC PC+C+ G A +CD +G+C C++N G C++C+ G +
Sbjct: 1556 VTGRRCDTCSPGFHGYPRCRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQCSLGTF 1615
Query: 142 GNALEGA-VTDCKQCPC 157
+L+ A C +C C
Sbjct: 1616 --SLDAANPKGCTRCFC 1630
Score = 112 (44.5 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 29/95 (30%), Positives = 42/95 (44%)
Query: 103 CVPCNCNGHA-----D-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
C CNC+G D CD +SG+C C+ N G C+ C+ G++G C+ C
Sbjct: 1525 CEECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFHG------YPRCRPCD 1578
Query: 157 CPNQGPCVQLDDD---QVVCSECPRGYGGEKMSPG 188
C G + D Q C E +G ++ S G
Sbjct: 1579 CHEAGTAPGVCDPLTGQCYCKENVQGPKCDQCSLG 1613
Score = 108 (43.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCP 158
F C PC+C A +CD +G+CIC T +C C +G + L G C++C C
Sbjct: 1478 FPNCRPCDCG--ARLCDELTGQCICPPRTIPPDCLLCQPQTFGCHPLVG----CEECNCS 1531
Query: 159 NQG------PCVQLDDDQVVCSECPRGYGGEKMSPG 188
G P D Q C G + SPG
Sbjct: 1532 GPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPG 1567
Score = 106 (42.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 33/113 (29%), Positives = 46/113 (40%)
Query: 88 TGYHHEPTSGG--AFSRCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYG 142
TG + S G F CVPC+C+ + CD SG+C C+ G C+ C G Y
Sbjct: 657 TGTACQECSPGFHGFPSCVPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYN 716
Query: 143 NAL--EGAVTDCKQCPC----PN-QGPCV-QLDDDQVVCSECPRGYGGEKMSP 187
G+ P P Q PC+ + + C C G+ G +SP
Sbjct: 717 FPYCEAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGFWG--LSP 767
Score = 101 (40.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 30/107 (28%), Positives = 43/107 (40%)
Query: 83 THYQLTGYHHEPTSGGAFSRCV-------------PCNCN---GHADICDAESGRCICQD 126
+H GYH P+S F R PC C+ C+ G+C C
Sbjct: 1402 SHCAAQGYHISPSSSSLFCRNAAASLSLFYNNGARPCGCHEVGATGPTCEPFGGQCPCHA 1461
Query: 127 NTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+ G +C RCA GY+G +C+ C C + C +L Q +C
Sbjct: 1462 HVIGRDCSRCATGYWG------FPNCRPCDCGAR-LCDELTG-QCIC 1500
Score = 95 (38.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/78 (28%), Positives = 33/78 (42%)
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCV--QLDDDQV 171
C+C + GD+C+ CA G+Y + + C C C P G CV Q + +
Sbjct: 1831 CLCPASYRGDSCQECAPGFYRDVKGLFLGRCVPCQCHGHSDRCLPGSGVCVDCQHNTEGA 1890
Query: 172 VCSECPRGYGGEKMSPGA 189
C C G+ + P A
Sbjct: 1891 HCERCQAGFVSSRDDPSA 1908
Score = 90 (36.7 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
RC+CQ G +C+RC GY+G +C+ C C +G QL
Sbjct: 604 RCLCQPEFAGPHCDRCRPGYHG------FPNCQACTCDPRGALDQL 643
Score = 88 (36.0 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 24/86 (27%), Positives = 36/86 (41%)
Query: 103 CVPCNCN-----GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCP 156
C C+C+ G C +G+C C+ + G C C G++G L+ A C+ C
Sbjct: 773 CTRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGFFG--LDQADYFGCRSCR 830
Query: 157 CPNQGPCVQLDDDQV-VCSECPRGYG 181
C G Q + + VC P G
Sbjct: 831 CDIGGALGQSCEPRTGVCRCRPNTQG 856
Score = 85 (35.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/80 (28%), Positives = 31/80 (38%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY P G C C C G CD +GRC C G+ C+ C++ + G
Sbjct: 2105 GYWGLPEQG-----CRRCQCPGGR--CDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGGP 2157
Query: 149 VTDCKQCPCPNQGPCVQLDD 168
V C + + LDD
Sbjct: 2158 VGHSIHCEVCDHCVVLLLDD 2177
Score = 78 (32.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 25/89 (28%), Positives = 39/89 (43%)
Query: 103 CVPCNCN-GHA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C C C+ G A C+ +G C C+ NT G C AR +Y L + ++ P
Sbjct: 826 CRSCRCDIGGALGQSCEPRTGVCRCRPNTQGPTCSEPARDHYLPDLHHLRLELEEAATP- 884
Query: 160 QGPCVQLDDDQVVCSECP-RGYGGEKMSP 187
+G V+ + + RGY +M+P
Sbjct: 885 EGHAVRFGFNPLEFENFSWRGYA--QMAP 911
Score = 74 (31.1 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C+C+ + G +C+RC G++G + C +C C +G
Sbjct: 744 CMCRAHVEGPSCDRCKPGFWGLSPSNP-EGCTRCSCDLRG 782
Score = 70 (29.7 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C + G +C RCA GY+G +C+ C C
Sbjct: 1456 QCPCHAHVIGRDCSRCATGYWG------FPNCRPCDC 1486
Score = 67 (28.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C++N G C++C+ G + +L+ A C +C C
Sbjct: 1595 QCYCKENVQGPKCDQCSLGTF--SLDAANPKGCTRCFC 1630
Score = 66 (28.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
+C C+ N G C+ C+ G++G C+ C C G
Sbjct: 1549 QCKCRPNVTGRRCDTCSPGFHG------YPRCRPCDCHEAG 1583
Score = 63 (27.2 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
+C C+ + G C C G++G L+ A C+ C C
Sbjct: 796 QCFCKPHVCGQACASCKDGFFG--LDQADYFGCRSCRC 831
Score = 58 (25.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 14/59 (23%), Positives = 22/59 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C C+ G C+ C+ G++G C C C +G D + R R+
Sbjct: 650 CRCRPGYTGTACQECSPGFHG------FPSCVPCHCSAEGSLHAACDPRSGQCSCRPRV 702
Score = 54 (24.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 4 RCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQGPCVQ 48
+CIC T +C C +G + L G C++C C GP +Q
Sbjct: 1497 QCICPPRTIPPDCLLCQPQTFGCHPLVG----CEECNC--SGPGIQ 1536
Score = 52 (23.4 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 5 CICQDNTGGDNCERCARGYY 24
C C+ NT G C AR +Y
Sbjct: 848 CRCRPNTQGPTCSEPARDHY 867
Score = 45 (20.9 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 4 RCICQDNTGGDNCERCARGYY 24
+C C+ G C+ C G Y
Sbjct: 695 QCSCRPRVTGLRCDTCVPGAY 715
Score = 41 (19.5 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
QCPC + D CS C GY G
Sbjct: 1456 QCPC--HAHVIGRD-----CSRCATGYWG 1477
Score = 38 (18.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 16/45 (35%), Positives = 18/45 (40%)
Query: 6 ICQDNTGGDN----CERCARGYYG-NALEGAV--TDCKQCPC-PN 42
+CQ T G + CE C G L TD QC C PN
Sbjct: 1511 LCQPQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRPN 1555
Score = 36 (17.7 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 174 SECPRGYG 181
S CP GYG
Sbjct: 1332 SFCPHGYG 1339
>FB|FBgn0261451 [details] [associations]
symbol:trol "terribly reduced optic lobes" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=NAS] [GO:0005604 "basement membrane" evidence=ISS]
[GO:0055059 "asymmetric neuroblast division" evidence=NAS]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0072347 "response to anesthetic" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005811 EMBL:AE014298 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 GO:GO:0045199 GO:GO:0072347 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF02210 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 UniGene:Dm.14114
GeneID:45320 KEGG:dme:Dmel_CG33950 CTD:45320 FlyBase:FBgn0261451
ChiTaRS:trol GenomeRNAi:45320 NextBio:838006 RefSeq:NP_001027038.2
ProteinModelPortal:Q9W4Y3 SMR:Q9W4Y3 STRING:Q9W4Y3 PRIDE:Q9W4Y3
UCSC:CG33950-RF InParanoid:Q9W4Y3 PhylomeDB:Q9W4Y3
ArrayExpress:Q9W4Y3 Bgee:Q9W4Y3 Uniprot:Q9W4Y3
Length = 4629
Score = 192 (72.6 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 41/116 (35%), Positives = 59/116 (50%)
Query: 47 VQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC 106
V LD +NLG + ++ GL+ + GY +P G C PC
Sbjct: 2408 VTLDVATPTNLGTPRAVEVEQCRCPEGYLGLSCEQCA----PGYARDPEGGIYLGLCRPC 2463
Query: 107 NCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
CNGH+ C++++G C C DNT G +CERCA GY G+A G + DC+ P++G
Sbjct: 2464 ECNGHSKYCNSDTGDCEECSDNTEGPSCERCAAGYVGDATRGTIYDCQ----PDEG 2515
Score = 149 (57.5 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 44/162 (27%), Positives = 60/162 (37%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C C + G +CE+CA GY + G C+ C C D + T
Sbjct: 2428 QCRCPEGYLGLSCEQCAPGYARDPEGGIYLGLCRPCECNGHSKYCNSDTGDCEECSDNTE 2487
Query: 63 ----IRIKSALGGNRTRGLALTRQTHYQLTGYH--HEPTSGGAFSRCVP-CNCNGHADIC 115
R + G+ TRG Q GY P G C C G I
Sbjct: 2488 GPSCERCAAGYVGDATRGTIYDCQPD---EGYPIPSPPAPGNQTLECTAYCQIEG---IY 2541
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
D C+C+ N GD C++C G YG + + CK+C C
Sbjct: 2542 DCRGNECLCKRNVIGDQCDQCRPGTYGLSAQNQ-DGCKECYC 2582
Score = 134 (52.2 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 41/149 (27%), Positives = 60/149 (40%)
Query: 17 ERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRG 76
+ C G YG+ G CK+CPCP G Q S G+ R G R
Sbjct: 2094 DSCPSGTYGDPRRGV--PCKECPCPLTGSNNFASGCQQSPDGDVV-CRCNEGYTGRRCEQ 2150
Query: 77 LALTRQTHYQLTGYHHEPTSGGAFSRCVP---CNCNGHADICDAESGRCICQDNTGGDNC 133
A GY P + G R +P CN +G + +G C C+D+ G+ C
Sbjct: 2151 CA---------AGYQGNPLAAGGICRRIPDTSCNVDGTYSV--HSNGTCQCKDSVIGEQC 2199
Query: 134 ERC-ARGYYGNALEGAVTDCKQCPCPNQG 161
+ C ++ ++ N+ T C +C C G
Sbjct: 2200 DTCKSKSFHLNSF--TYTGCIECFCSGVG 2226
Score = 77 (32.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 5 CICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCP 39
C C + G CE+CA GY GN L G + C++ P
Sbjct: 2137 CRCNEGYTGRRCEQCAAGYQGNPLAAGGI--CRRIP 2170
Score = 76 (31.8 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 146 EGAVTDCKQC---PCPNQGPCVQLDDDQVVCSECPRGYGG 182
EG +TDC+ C PC N+G C++ +Q C G+ G
Sbjct: 4094 EG-ITDCRPCAQGPCQNKGVCLESQTEQAYTCICQPGWTG 4132
Score = 76 (31.8 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
A+ C PC N G C + +D VCS CP G+ G+
Sbjct: 4390 AMAPCASDPCENGGSCSE-QEDVAVCS-CPFGFSGK 4423
Score = 62 (26.9 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1 MFRRCICQDNTGGDNCERCARGY 23
+ +C C GD+CE CA GY
Sbjct: 2054 LVEKCQCPPGYVGDSCESCASGY 2076
Score = 61 (26.5 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 91 HHEPTSGGAFSRCVPCNCNGHADICDAESG---RCICQDNTGGDNC 133
H+ SG S C PC+ + + + CD SG C C+ GD C
Sbjct: 2797 HYRDASGSC-SLC-PCDVS-NTESCDLVSGGYVECRCKARWKGDRC 2839
Score = 35 (17.4 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 4 RCICQDNTGGDNC 16
R CQD++ NC
Sbjct: 1385 RTDCQDSSDEQNC 1397
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 175 (66.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 100 FSR--CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
FS+ C+PC CN + CDA +G C+ CQ+N+ G++CE C G+Y + A +C +CP
Sbjct: 293 FSKNGCLPCQCNNRSASCDALTGACLNCQENSKGNHCEECKEGFYQSP--DATKECLRCP 350
Query: 157 CP---NQGPC-VQLDDDQVVCSECPRGYGG 182
C + G C ++ + + C +C GY G
Sbjct: 351 CSAVTSTGSCSIKSSELEPECDQCKDGYIG 380
Score = 152 (58.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP--- 158
C+PC CN + CDA +G C+ CQ+N+ G++CE C G+Y + A +C +CPC
Sbjct: 298 CLPCQCNNRSASCDALTGACLNCQENSKGNHCEECKEGFYQSP--DATKECLRCPCSAVT 355
Query: 159 NQGPC------VQLDDDQVV-------CSECPRGY 180
+ G C ++ + DQ C++C GY
Sbjct: 356 STGSCSIKSSELEPECDQCKDGYIGPNCNKCENGY 390
Score = 147 (56.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 47/154 (30%), Positives = 69/154 (44%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQGPCVQLDDDQVSNLGNR 60
C+ CQ+N+ G++CE C G+Y + A +C +CPC + G C + ++ ++
Sbjct: 317 CLNCQENSKGNHCEECKEGFYQSP--DATKECLRCPCSAVTSTGSC-SIKSSELEPECDQ 373
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD------I 114
+ +G N + GY++ S C C C+GH D I
Sbjct: 374 CK---DGYIGPNCNKCE----------NGYYNFD------SICRKCQCHGHVDPVKTPKI 414
Query: 115 CDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
C ESG CI C NT G CE C GY + LEG
Sbjct: 415 CKPESGECINCLHNTTGFWCENCLEGYVHD-LEG 447
Score = 131 (51.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/126 (31%), Positives = 55/126 (43%)
Query: 72 NRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-----CVPCNCNGHADI---CDAESGRCI 123
N+T G R YQ G H E G + C PC+C+ H + C++ SG+C
Sbjct: 218 NQTTGQCECRPG-YQ--GLHCETCKEGFYLNYTSGLCQPCDCSPHGALSIPCNS-SGKCQ 273
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDDDQVVCSECPRGYGG 182
C+ G C+RC GYYG + G C C C N+ C L + C E +G
Sbjct: 274 CKVGVIGSICDRCQDGYYGFSKNG----CLPCQCNNRSASCDALTGACLNCQENSKGNHC 329
Query: 183 EKMSPG 188
E+ G
Sbjct: 330 EECKEG 335
Score = 110 (43.8 bits), Expect = 0.00088, P = 0.00088
Identities = 27/89 (30%), Positives = 40/89 (44%)
Query: 106 CNCN--GHADI--CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVT--DCK-----Q 154
CNC+ G ++ C+ +G+C C+ G +CE C G+Y N G DC
Sbjct: 204 CNCSVVGSLNVNRCNQTTGQCECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPHGALS 263
Query: 155 CPCPNQGPC-VQLDDDQVVCSECPRGYGG 182
PC + G C ++ +C C GY G
Sbjct: 264 IPCNSSGKCQCKVGVIGSICDRCQDGYYG 292
Score = 83 (34.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGR----CI-CQDNTGGDNCERCARGYYGN 143
G++ P + RC PC+ C +S C C+D G NC +C GYY
Sbjct: 335 GFYQSPDATKECLRC-PCSAVTSTGSCSIKSSELEPECDQCKDGYIGPNCNKCENGYYN- 392
Query: 144 ALEGAVTDCKQCPC 157
+ C++C C
Sbjct: 393 -FDSI---CRKCQC 402
Score = 77 (32.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 43
+C C+ G C+RC GYYG + G C C C N+
Sbjct: 271 KCQCKVGVIGSICDRCQDGYYGFSKNG----CLPCQCNNR 306
Score = 73 (30.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG----PC 46
+C C+ G +CE C G+Y N G C+ C C G PC
Sbjct: 223 QCECRPGYQGLHCETCKEGFYLNYTSGL---CQPCDCSPHGALSIPC 266
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 161 (61.7 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 36/84 (42%), Positives = 43/84 (51%)
Query: 102 RCVPCNCNGH-----ADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
RC C CN + D CD +G C+ C NT G C+ C RGYYGNAL DCK+C
Sbjct: 1050 RCKECCCNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQSCKRGYYGNAL---AQDCKEC 1106
Query: 156 PCPNQGPCVQLDDDQVVCSECPRG 179
C +G DD S+CP G
Sbjct: 1107 SCDRRGT-----DD----SKCPAG 1121
Score = 153 (58.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 100 FSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
F C C CN ADICD +G C+ C++++ G NCERC GY G+ + G C+ C CP
Sbjct: 941 FPLCRRCQCNRLADICDPITGDCLDCREHSAGRNCERCEEGYVGDPVSGQ--PCEPCLCP 998
Query: 159 N 159
+
Sbjct: 999 D 999
Score = 139 (54.0 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 103 CVPCNCN--GHA-DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-- 157
C PC+C+ G ++CD +G+C C+D G C RC GYYG L C++C C
Sbjct: 898 CSPCDCDRSGSTTELCDQTTGQCSCRDGITGLQCNRCYPGYYGFPL------CRRCQCNR 951
Query: 158 ------PNQGPCVQLDDDQVV--CSECPRGYGGEKMS 186
P G C+ + C C GY G+ +S
Sbjct: 952 LADICDPITGDCLDCREHSAGRNCERCEEGYVGDPVS 988
Score = 137 (53.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 103 CVPCNCN--GHAD--ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C+PC+C+ G D +CD +G+C+C+ N G+ C+RC G+YG + + + C+ C C
Sbjct: 394 CIPCDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDP-SGCQLCRC 451
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 41/141 (29%), Positives = 59/141 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+ N G+ C+RC G+YG + + + C+ C C G QV N + T
Sbjct: 416 QCVCKQNIEGERCDRCKVGFYGFSRDDP-SGCQLCRCNFLGTI------QVGNPCDPTT- 467
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN-GHA--DICDAESG 120
G A Q L GY G C+PC+C+ G A C + G
Sbjct: 468 ------GRCICEHFAYGSQCDQCLPGYWG---LGNTVYGCIPCDCDIGGALKTECSSVDG 518
Query: 121 RCICQDNTGGDNCERCARGYY 141
+C C+ N G C A GY+
Sbjct: 519 QCKCRPNMVGQKCNDPAPGYF 539
Score = 127 (49.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 103 CVPCNCNG-HA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
C PCNCN HA ICD +G+C+CQ GG C+ C ++GN C C C
Sbjct: 1160 CQPCNCNREHALNYICDKITGQCLCQPEYGGRICDECGPNHFGNP----DLQCMFCDCNL 1215
Query: 160 QG---PCVQLDDDQVVCSECPRGYGGEKMSPG 188
+G P + +C G ++ +PG
Sbjct: 1216 EGTVHPACDAYTGECLCKPGVTGPFCDECAPG 1247
Score = 116 (45.9 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 44
C+ C NT G C+ C RGYYGNAL DCK+C C +G
Sbjct: 1075 CLRCLHNTEGPRCQSCKRGYYGNAL---AQDCKECSCDRRG 1112
Score = 102 (41.0 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 36/102 (35%), Positives = 42/102 (41%)
Query: 89 GYHHEPTSGGAFSRCVPCNC---NGH----ADIC--DAESGR--CICQDNTGGDNCERCA 137
GY +P SG C PC C NG A C D SG C C G C+ C+
Sbjct: 981 GYVGDPVSG---QPCEPCLCPDLNGSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCDSCS 1037
Query: 138 RGYYGNA-LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
G+YG+ L G CK+C C N D V EC R
Sbjct: 1038 PGFYGDLRLPGG--RCKECCCNNNIDPRDGDACDPVTGECLR 1077
Score = 101 (40.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 25/82 (30%), Positives = 31/82 (37%)
Query: 104 VPCNCN---GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
V CNC+ + C G+C C+ N G C+ CA YG G C C C
Sbjct: 851 VSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNG----CSPCDCDRS 906
Query: 161 GPCVQLDDDQVVCSECPRGYGG 182
G +L D C G G
Sbjct: 907 GSTTELCDQTTGQCSCRDGITG 928
Score = 97 (39.2 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 42
C+ C++++ G NCERC GY G+ + G C+ C CP+
Sbjct: 963 CLDCREHSAGRNCERCEEGYVGDPVSGQ--PCEPCLCPD 999
Score = 96 (38.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 4 RCICQDNTGGDNCERCARGYYGNA--LEGAVTD---CKQCPC 40
RC+CQ NT G NCERC + +Y +A G D CK+C C
Sbjct: 296 RCVCQHNTAGYNCERC-QDFYHDAPWRPGGKADSDVCKRCNC 336
Score = 45 (20.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 3 RRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PN-QGP-CVQLDD 51
+ C C D G D+ +C G + D QCPC P QG C + DD
Sbjct: 1104 KECSC-DRRGTDD-SKCPAGSPCFCDQ----DTGQCPCRPGVQGALCNECDD 1149
Score = 38 (18.4 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 16/52 (30%), Positives = 21/52 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYG---NALE-------GAVTD-CKQ----CPC 40
+C C+ N G C+ CA YG N G+ T+ C Q C C
Sbjct: 871 QCQCKPNVIGRCCDSCAPLTYGLGPNGCSPCDCDRSGSTTELCDQTTGQCSC 922
Score = 35 (17.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 25 GNALEGAVTDCKQCPCPNQGPCVQ 48
G+A + +C +C +GP Q
Sbjct: 1065 GDACDPVTGECLRCLHNTEGPRCQ 1088
>UNIPROTKB|F1MYX9 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 CTD:3910 KO:K06241
OMA:QLDDYNA EMBL:DAAA02025880 EMBL:DAAA02025869 EMBL:DAAA02025870
EMBL:DAAA02025871 EMBL:DAAA02025872 EMBL:DAAA02025873
EMBL:DAAA02025874 EMBL:DAAA02025875 EMBL:DAAA02025876
EMBL:DAAA02025877 EMBL:DAAA02025878 EMBL:DAAA02025879
IPI:IPI01003454 RefSeq:NP_001192894.1 UniGene:Bt.33367
ProteinModelPortal:F1MYX9 PRIDE:F1MYX9 Ensembl:ENSBTAT00000011612
GeneID:529670 KEGG:bta:529670 NextBio:20875080 Uniprot:F1MYX9
Length = 1824
Score = 228 (85.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 61/185 (32%), Positives = 84/185 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT G++CE+C GY G+A+ G C+ CPCP P V + R
Sbjct: 98 CVHCQRNTTGEHCEKCLDGYIGDAIRGPPRFCQPCPCPL--PHVANFAESCYRKNGAVRC 155
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDA 117
K G A GY+ P G S C C+C+G++D CD
Sbjct: 156 ICKENYAGPNCERCA---------PGYYGNPLLIG--STCKKCDCSGNSDPNLIFEDCDE 204
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEG---AVTDCKQCPCPN-QGPCVQLDDDQVV 172
+G+C C NT G CERCA GYYG+A A +C PC + G C++ +
Sbjct: 205 VTGQCRNCLRNTTGFKCERCAPGYYGDARRAKNCAACNCGGGPCDSITGECLEEGFESPT 264
Query: 173 CSECP 177
++CP
Sbjct: 265 GTDCP 269
Score = 184 (69.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 99 AFSR-CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
A+S C+PC+CNG+++ C SG C+ CQ NT G++CE+C GY G+A+ G C+ CP
Sbjct: 74 AYSEECLPCDCNGNSNECLDGSGLCVHCQRNTTGEHCEKCLDGYIGDAIRGPPRFCQPCP 133
Query: 157 CP-----NQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
CP N + V C C Y G E+ +PG
Sbjct: 134 CPLPHVANFAESCYRKNGAVRCI-CKENYAGPNCERCAPG 172
Score = 172 (65.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 43/100 (43%), Positives = 55/100 (55%)
Query: 103 CVPCNCN-GH----ADICDAESG--RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C PC C H A+ C ++G RCIC++N G NCERCA GYYGN L T CK+C
Sbjct: 129 CQPCPCPLPHVANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLIGST-CKKC 187
Query: 156 PCP-NQGPCVQLDD-DQVV--CSECPR---GYGGEKMSPG 188
C N P + +D D+V C C R G+ E+ +PG
Sbjct: 188 DCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPG 227
Score = 147 (56.8 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 46/140 (32%), Positives = 62/140 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVSNLGNRT 61
RCIC++N G NCERCA GYYGN L T CK+C C N P + +D D+V+
Sbjct: 154 RCICKENYAGPNCERCAPGYYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEVTG----- 207
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-ADICDAESG 120
+ ++ L T G R GY+ + C CNC G D E
Sbjct: 208 --QCRNCL--RNTTGFKCERCA----PGYYGDARRA---KNCAACNCGGGPCDSITGECL 256
Query: 121 RCICQDNTGGD----NCERC 136
+ TG D +C++C
Sbjct: 257 EEGFESPTGTDCPTISCDKC 276
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 180 (68.4 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 39/102 (38%), Positives = 56/102 (54%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI------CDAESGRCI-CQDNTGGDNCERCARGYY 141
GY+ P G + C C+CNG++D C +G+C+ C +T GDNCERCA G+Y
Sbjct: 140 GYYGNPMELG--NSCKKCDCNGNSDPNLIFNECHNVTGKCLNCWGDTAGDNCERCAPGFY 197
Query: 142 GNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
G+A+ + DC++C C N+ DD VC C G G+
Sbjct: 198 GDAI--SAKDCQECQC-NKCGTASCDDRSGVC-HCKPGVTGQ 235
Score = 152 (58.6 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 37/93 (39%), Positives = 45/93 (48%)
Query: 98 GAFSRCVPCNC------NGHADICD--AESGRCICQDNTGGDNCERCARGYYGNALEGAV 149
G F C PC C N A CD E RC+CQD G CERCA GYYGN +E
Sbjct: 92 GTFM-CRPCACPLSLESNNFAAHCDRRGEFLRCVCQDGYAGHYCERCAPGYYGNPMELG- 149
Query: 150 TDCKQCPCP-NQGPCVQLDDDQVVCSECPRGYG 181
CK+C C N P + ++ V +C +G
Sbjct: 150 NSCKKCDCNGNSDPNLIFNECHNVTGKCLNCWG 182
Score = 149 (57.5 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 34/95 (35%), Positives = 46/95 (48%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP--- 158
C+PCNC GHAD C+ +G CI C+D+T GD CE C + L C+ C CP
Sbjct: 46 CLPCNCKGHADSCEDITGICIDCRDHTLGDFCELCEDRFLPVFLPDGTFMCRPCACPLSL 105
Query: 159 -NQGPCVQLDD-DQVVCSECPRGYGG---EKMSPG 188
+ D + + C GY G E+ +PG
Sbjct: 106 ESNNFAAHCDRRGEFLRCVCQDGYAGHYCERCAPG 140
Score = 130 (50.8 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 24/45 (53%), Positives = 27/45 (60%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGP 45
F RC+CQD G CERCA GYYGN +E CK+C C N P
Sbjct: 120 FLRCVCQDGYAGHYCERCAPGYYGNPMELG-NSCKKCDCNGNSDP 163
Score = 120 (47.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
+C+ C +T GDNCERCA G+YG+A+ + DC++C C N+ DD
Sbjct: 176 KCLNCWGDTAGDNCERCAPGFYGDAI--SAKDCQECQC-NKCGTASCDD 221
Score = 107 (42.7 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 34/102 (33%), Positives = 43/102 (42%)
Query: 97 GGAFSR--CVPCNCN--GHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC 152
G A S C C CN G A CD SG C C+ G C+RC G+ G C
Sbjct: 198 GDAISAKDCQECQCNKCGTAS-CDDRSGVCHCKPGVTGQLCDRCEDGHSGFC---TCMGC 253
Query: 153 KQCPCPN---QGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
++C C + + C L C +C G GG E+ PG
Sbjct: 254 RRCECASAALRATCHPLTHS---C-QCRPGAGGRYCERCLPG 291
Score = 98 (39.6 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 24/86 (27%), Positives = 36/86 (41%)
Query: 103 CVPCNCNGHA--DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ 160
C C C A C + C C+ GG CERC G++ + G C++C CP +
Sbjct: 253 CRRCECASAALRATCHPLTHSCQCRPGAGGRYCERCLPGFWDYSPSG----CRKCDCPEE 308
Query: 161 ------GPCV----QLDDDQVVCSEC 176
G C+ Q+ + + C C
Sbjct: 309 NCDLHTGECLPELSQISECNISCDAC 334
Score = 73 (30.8 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
CI C+D+T GD CE C + L C+ C CP
Sbjct: 65 CIDCRDHTLGDFCELCEDRFLPVFLPDGTFMCRPCACP 102
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 101 SRCVPCNCNGHADICDAESGRCI---CQDNTGGDNCERCARGYYGN 143
S C C+C + CD +G C+ Q + +C+ C G+
Sbjct: 298 SGCRKCDCP--EENCDLHTGECLPELSQISECNISCDACIWNLIGD 341
Score = 39 (18.8 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 19 CARGYYGNALEGAVTDCKQCPC 40
CARGY+ L T C C C
Sbjct: 34 CARGYF---LSDQET-CLPCNC 51
>UNIPROTKB|F1PR66 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 OMA:QLDDYNA EMBL:AAEX03008620
Ensembl:ENSCAFT00000006483 Uniprot:F1PR66
Length = 1760
Score = 222 (83.2 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 58/167 (34%), Positives = 76/167 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT G++CE+C GY G+++ G C+ CPCP P V + R
Sbjct: 41 CVHCQRNTTGEHCEKCLDGYIGDSIRGPPRFCQPCPCPL--PYVANFAESCYRKNGAVRC 98
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDA 117
K G A GY+ P G S C C+C+G++D CD
Sbjct: 99 ICKENYAGPNCERCA---------PGYYGNPLLIG--STCKKCDCSGNSDPNLIFEDCDE 147
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
+G+C C NT G CERCA GYYG+A +C C C GPC
Sbjct: 148 VTGQCRNCLRNTTGFKCERCAPGYYGDAR--IAKNCAVCNCGG-GPC 191
Score = 179 (68.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 37/95 (38%), Positives = 51/95 (53%)
Query: 103 CVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP--- 158
C+PC CNG++D C SG C+ CQ NT G++CE+C GY G+++ G C+ CPCP
Sbjct: 22 CMPCVCNGNSDECLDGSGFCVHCQRNTTGEHCEKCLDGYIGDSIRGPPRFCQPCPCPLPY 81
Query: 159 --NQGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
N + V C C Y G E+ +PG
Sbjct: 82 VANFAESCYRKNGAVRCI-CKENYAGPNCERCAPG 115
Score = 172 (65.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 42/100 (42%), Positives = 54/100 (54%)
Query: 103 CVPCNCN-----GHADICDAESG--RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
C PC C A+ C ++G RCIC++N G NCERCA GYYGN L T CK+C
Sbjct: 72 CQPCPCPLPYVANFAESCYRKNGAVRCICKENYAGPNCERCAPGYYGNPLLIGST-CKKC 130
Query: 156 PCP-NQGPCVQLDD-DQVV--CSECPR---GYGGEKMSPG 188
C N P + +D D+V C C R G+ E+ +PG
Sbjct: 131 DCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPG 170
Score = 144 (55.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/133 (33%), Positives = 58/133 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVSNLGNRT 61
RCIC++N G NCERCA GYYGN L T CK+C C N P + +D D+V+
Sbjct: 97 RCICKENYAGPNCERCAPGYYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEVTG----- 150
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-ADICDAESG 120
+ ++ L T G R GY+ + C CNC G D E
Sbjct: 151 --QCRNCL--RNTTGFKCERCA----PGYYGDARIA---KNCAVCNCGGGPCDSVTGECL 199
Query: 121 RCICQDNTGGDNC 133
+ TG D C
Sbjct: 200 EEGFEPPTGCDKC 212
>UNIPROTKB|I3LV27 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 EMBL:CU993814
Ensembl:ENSSSCT00000024191 Uniprot:I3LV27
Length = 1668
Score = 220 (82.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 46/108 (42%), Positives = 62/108 (57%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + G RCVPCNC+GH++ C SG CI CQ NT G++CERC GYYGNA+ G
Sbjct: 62 GYYRD-NKGFYTGRCVPCNCHGHSNRCKDGSGICINCQHNTAGEHCERCKEGYYGNAIHG 120
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ C CP+ C+ + + C C GY G E+ +PG
Sbjct: 121 S---CQACLCPHSNSFATGCI-VTGGNMRCL-CKPGYTGTLCERCAPG 163
Score = 165 (63.1 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 47/137 (34%), Positives = 62/137 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT G++CERC GYYGNA+ G+ C+ C CP+ + GN R
Sbjct: 94 CINCQHNTAGEHCERCKEGYYGNAIHGS---CQACLCPHSN---SFATGCIVTGGNM-RC 146
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K G A GY P GG+ C CN NG CD +G C
Sbjct: 147 LCKPGYTGTLCERCA---------PGYFGNPQKFGGSCQPC-NCNSNGQLVSCDPLTGDC 196
Query: 123 ICQD--NTG-GDNCERC 136
+ Q+ ++G G+ C+ C
Sbjct: 197 MNQEPKDSGPGEECDDC 213
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 38/126 (30%), Positives = 53/126 (42%)
Query: 72 NRTR-GLALTRQTHYQLTGYHHEPTSGGAFSR-----CVPCNC---NGHADICDAESG-- 120
NR + G + + G H E G + C C C N A C G
Sbjct: 85 NRCKDGSGICINCQHNTAGEHCERCKEGYYGNAIHGSCQACLCPHSNSFATGCIVTGGNM 144
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC-SECPRG 179
RC+C+ G CERCA GY+GN + + C+ C C + G V D C ++ P+
Sbjct: 145 RCLCKPGYTGTLCERCAPGYFGNPQKFGGS-CQPCNCNSNGQLVSCDPLTGDCMNQEPKD 203
Query: 180 YG-GEK 184
G GE+
Sbjct: 204 SGPGEE 209
Score = 38 (18.4 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 127 NTGGDNCERCA 137
NT GD RCA
Sbjct: 497 NTSGDELVRCA 507
>UNIPROTKB|F1SBB3 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 EMBL:CU993814 Ensembl:ENSSSCT00000004108 OMA:RAANQSS
Uniprot:F1SBB3
Length = 1724
Score = 220 (82.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 46/108 (42%), Positives = 62/108 (57%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + G RCVPCNC+GH++ C SG CI CQ NT G++CERC GYYGNA+ G
Sbjct: 62 GYYRD-NKGFYTGRCVPCNCHGHSNRCKDGSGICINCQHNTAGEHCERCKEGYYGNAIHG 120
Query: 148 AVTDCKQCPCPNQGP----CVQLDDDQVVCSECPRGYGG---EKMSPG 188
+ C+ C CP+ C+ + + C C GY G E+ +PG
Sbjct: 121 S---CQACLCPHSNSFATGCI-VTGGNMRCL-CKPGYTGTLCERCAPG 163
Score = 165 (63.1 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 47/137 (34%), Positives = 62/137 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
CI CQ NT G++CERC GYYGNA+ G+ C+ C CP+ + GN R
Sbjct: 94 CINCQHNTAGEHCERCKEGYYGNAIHGS---CQACLCPHSN---SFATGCIVTGGNM-RC 146
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSRCVPCNCNGHADICDAESGRC 122
K G A GY P GG+ C CN NG CD +G C
Sbjct: 147 LCKPGYTGTLCERCA---------PGYFGNPQKFGGSCQPC-NCNSNGQLVSCDPLTGDC 196
Query: 123 ICQD--NTG-GDNCERC 136
+ Q+ ++G G+ C+ C
Sbjct: 197 MNQEPKDSGPGEECDDC 213
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 38/126 (30%), Positives = 53/126 (42%)
Query: 72 NRTR-GLALTRQTHYQLTGYHHEPTSGGAFSR-----CVPCNC---NGHADICDAESG-- 120
NR + G + + G H E G + C C C N A C G
Sbjct: 85 NRCKDGSGICINCQHNTAGEHCERCKEGYYGNAIHGSCQACLCPHSNSFATGCIVTGGNM 144
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC-SECPRG 179
RC+C+ G CERCA GY+GN + + C+ C C + G V D C ++ P+
Sbjct: 145 RCLCKPGYTGTLCERCAPGYFGNPQKFGGS-CQPCNCNSNGQLVSCDPLTGDCMNQEPKD 203
Query: 180 YG-GEK 184
G GE+
Sbjct: 204 SGPGEE 209
Score = 38 (18.4 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 127 NTGGDNCERCA 137
NT GD RCA
Sbjct: 553 NTSGDELVRCA 563
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 216 (81.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 42/110 (38%), Positives = 52/110 (47%)
Query: 91 HHEPTSGGAF-SRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGA 148
H GG + C CNCNGHA CD G C+ CQ NT G C +C G++G+A++
Sbjct: 748 HFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGPQCNKCKAGFFGDAMKAT 807
Query: 149 VTDCKQCPCPN-------QGPCVQLDDDQVVCSECPRGYGG---EKMSPG 188
T C+ CPCP C D Q C C GY G E +PG
Sbjct: 808 ATSCRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPG 857
Score = 211 (79.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 45/112 (40%), Positives = 58/112 (51%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALE 146
TGY P SG C C+C+GH++ C+ E+G C CQ +T G CE+C GYYG+A
Sbjct: 1142 TGYTRTP-SGLYLGTCERCSCHGHSEACEPETGACQGCQHHTEGPRCEQCQPGYYGDAQR 1200
Query: 147 GAVTDCKQCPC---PNQGPCVQ---LDDD-QVVCSECPRGYGG---EKMSPG 188
G DC+ CPC P G LD D C C G+ G E+ +PG
Sbjct: 1201 GTPQDCQLCPCYGDPAAGQAAHTCFLDTDGHPTCDACSPGHSGRHCERCAPG 1252
Score = 209 (78.6 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 43/104 (41%), Positives = 51/104 (49%)
Query: 96 SGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG C C CNGH+D+C E+G C CQ N G+ CE CA GYYG+A G DC+
Sbjct: 1553 SGLYLGHCELCECNGHSDLCHPETGACSQCQHNAAGEFCELCAPGYYGDATAGTPEDCQP 1612
Query: 155 CPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
C CP P C L C+ C GY G E+ PG
Sbjct: 1613 CACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCGPG 1656
Score = 151 (58.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 50/166 (30%), Positives = 65/166 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC---PNQGPCVQ---LDDDQVSNLGNR 60
CQ +T G CE+C GYYG+A G DC+ CPC P G LD D G+
Sbjct: 1178 CQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQAAHTCFLDTD-----GHP 1232
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRC--VP----CNCNGHADI 114
T G A GY+ P+ G R VP CNC+ +
Sbjct: 1233 TCDACSPGHSGRHCERCA---------PGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSV 1283
Query: 115 ---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
CDA +G+C C+ G C C R ++ + C C C
Sbjct: 1284 SSQCDA-AGQCQCKAQVEGLTCSHC-RPHHFHLSASNPDGCLPCFC 1327
Score = 150 (57.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 44/165 (26%), Positives = 64/165 (38%)
Query: 1 MFRRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-G 58
++ C+ CQ NT G C +C G++G+A++ T C+ CPCP + D + G
Sbjct: 776 VYGHCLNCQHNTEGPQCNKCKAGFFGDAMKATATSCRPCPCPYIDASRRFSDTCFLDTDG 835
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCN-----CNGHAD 113
T G R A GY P G +C P N C+
Sbjct: 836 QATCDACAPGYTGRRCESCA---------PGYEGNPIQPGG--KCRPVNQEIVRCDERGS 884
Query: 114 ICDAESGR-CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+ SG C C++N G C CA G + + C +C C
Sbjct: 885 M--GTSGEACRCKNNVVGRLCNECADGSFHLSTRNP-DGCLKCFC 926
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/178 (26%), Positives = 68/178 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR- 62
+C C G +C+ C GY + C++C C + + + T
Sbjct: 1125 QCSCPPGYRGPSCQDCDTGYTRTPSGLYLGTCERCSCHGHSEACEPETGACQGCQHHTEG 1184
Query: 63 ---IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+ + G+ RG T Q QL + +P +G A C + +GH CDA
Sbjct: 1185 PRCEQCQPGYYGDAQRG---TPQD-CQLCPCYGDPAAGQAAHTCF-LDTDGHPT-CDA-- 1236
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQCPCPNQGPCVQLDDDQVVCSEC 176
C G +CERCA GYYGN +G Q P P C D V S+C
Sbjct: 1237 ----CSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNC---DPQGSVSSQC 1287
Score = 123 (48.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ N G+ CE CA GYYG+A G DC+ C CP P N+ +RT +
Sbjct: 1582 CQHNAAGEFCELCAPGYYGDATAGTPEDCQPCACPLTNP---------ENMFSRTCESLG 1632
Query: 67 SALGGNRTRGL--ALTRQTHYQL-TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
+ GG R T Q Q GY P+ G +C+P N + + R I
Sbjct: 1633 A--GGYRCTACEPGYTGQYCEQCGPGYVGNPSVQGG--QCLP-ETNQAPLVVEVHPARSI 1687
Query: 124 CQDNTGGDNCERC 136
GG + RC
Sbjct: 1688 VPQ--GGSHSLRC 1698
Score = 69 (29.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C+ PC N G C + VC CP G+ G +
Sbjct: 3848 CRDRPCQNGGQCHDSESSSYVCV-CPAGFTGSR 3879
Score = 52 (23.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 22/74 (29%), Positives = 29/74 (39%)
Query: 121 RCICQDNTGGDNCERCARGYYGN--ALEGAVTDCKQCPC-PN-QGP-CVQLDDDQVVCSE 175
+C+C+D GD CE L G +C C P GP C Q + S+
Sbjct: 4128 QCLCRDGFKGDLCEHEENPCQLREPCLHGGTCQGTRCLCLPGFSGPRCQQGSGHGIAESD 4187
Query: 176 CP-RGYGGEKMSPG 188
G GG +PG
Sbjct: 4188 WHLEGSGGND-APG 4200
Score = 46 (21.3 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 26/98 (26%), Positives = 38/98 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G C C R ++ + C PC C+ + S+ R I
Sbjct: 1292 QCQCKAQVEGLTCSHC-RPHHFHLSASNPDGC--LPCF----CMGITQQCASSAYTRHLI 1344
Query: 64 RIKSALGGNRTRGLALTR-QTHYQLTG-YHHEPTSGGA 99
A G +G AL Q + +LTG + EP GA
Sbjct: 1345 STHFAPGD--FQGFALVNPQRNSRLTGEFTVEPVPEGA 1380
Score = 44 (20.5 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
C++ PC + C+ + + C C G+ G+
Sbjct: 4108 CERQPCQHGATCMPAGEYEFQCL-CRDGFKGD 4138
Score = 44 (20.5 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 143 NALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
+ +G + + ++ PC + PC+ Q C G+ G + G+
Sbjct: 4133 DGFKGDLCEHEENPCQLREPCLHGGTCQGTRCLCLPGFSGPRCQQGS 4179
Score = 38 (18.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C C G +CE C ++ G + C C C
Sbjct: 731 CRCPIGYSGLSCESCD-AHFTRVPGGPYLGTCSGCNC 766
Score = 36 (17.7 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 85 YQLTGYHHEPTSGGAFSR 102
Y+L H PT GA ++
Sbjct: 642 YRLLSRGHTPTQPGALNQ 659
>UNIPROTKB|E1BXK1 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:AADN02034184 EMBL:AADN02034183 IPI:IPI00588334
Ensembl:ENSGALT00000007372 ArrayExpress:E1BXK1 Uniprot:E1BXK1
Length = 1175
Score = 165 (63.1 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 35/97 (36%), Positives = 47/97 (48%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGA 148
GY + G FS CVPCNC+G ICD ++G C D G++ C G Y +
Sbjct: 397 GYRRDAPHMGPFSICVPCNCHG-GGICDPDTGECYSGDENVGNSIS-CPFGSYRDPRPPH 454
Query: 149 VTDCKQCPCPNQGPCVQLD-DDQVVCSECPRGYGGEK 184
C+ CPC + C L ++VVC CP G G +
Sbjct: 455 --SCRACPCGHGQSCSVLPGQEEVVCDHCPPGAAGPR 489
Score = 154 (59.3 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 37/103 (35%), Positives = 51/103 (49%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADI-----CDAESGRCI-CQDNTGGDNCERCARGYYG 142
GY +P A C PC CN + + CD +G C+ C NT G +CERC G++G
Sbjct: 496 GYFGDPA---ASQPCRPCQCNSNVEPNAVGNCDRRTGECLKCIYNTAGFHCERCKDGFFG 552
Query: 143 NALEGAVTD-CKQCPCPNQG--PCVQLDDDQVVCSECPRGYGG 182
N L D C+ C C + G P + +D +C P G+GG
Sbjct: 553 NPLAPNPADKCRACNCNSVGAEPLMCRNDGSCICK--P-GFGG 592
Score = 140 (54.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 62/199 (31%), Positives = 82/199 (41%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVSNLGNRT 61
RC+ C NT G +CERC GYY +G C C C QG Q D SN R
Sbjct: 50 RCLGCLGNTAGAHCERCKEGYYRQQ-DGDC--CLPCRCHPQGSLSTQCD----SN--GRC 100
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGA--FSRCVP--CNCNGHADICDA 117
R +G R Q G+H +G RC C C+ A D
Sbjct: 101 SCR-PGVMGEKCDR---------CQ-PGFHSLSEAGCCPHCPRCRSQLCACDP-AGTGDC 148
Query: 118 ESGRCICQDNTGGDNCERCARGYYG-NALEGAVTDCKQCPC-PNQGPCVQLDDDQV--VC 173
SGRCIC+ G+ C+RC + +Y +A A C C C + CV ++ + +
Sbjct: 149 VSGRCICKVGVTGERCDRCKQNFYNLDARNPA--GCSPCFCYGHSSSCVSAENYSIHKIT 206
Query: 174 S---ECPRGYGG--EKMSP 187
S + P G+ G E SP
Sbjct: 207 SSFQQGPEGWTGVHEDRSP 225
Score = 138 (53.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/131 (29%), Positives = 52/131 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C G CE CA GY+G+ A C+ C C + ++ + V N RT +K
Sbjct: 481 CPPGAAGPRCEFCADGYFGDP--AASQPCRPCQCNSN-----VEPNAVGNCDRRTGECLK 533
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRCIC 124
T G R G+ P + +C CNCN G + G CIC
Sbjct: 534 CIYN---TAGFHCERCKD----GFFGNPLAPNPADKCRACNCNSVGAEPLMCRNDGSCIC 586
Query: 125 QDNTGGDNCER 135
+ GG NCE+
Sbjct: 587 KPGFGGPNCEQ 597
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 39/100 (39%), Positives = 45/100 (45%)
Query: 95 TSGGAFSRCVPCNCNGHADIC--D----AESG---RCI-CQDNTGGDNCERCARGYYGNA 144
TSGG C+CNG + C D E+G RC+ C NT G +CERC GYY
Sbjct: 20 TSGGE-----ACDCNGMSRQCVFDWQLLMETGNGYRCLGCLGNTAGAHCERCKEGYYRQQ 74
Query: 145 LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+G C C C QG D CS C G GEK
Sbjct: 75 -DGDC--CLPCRCHPQGSLSTQCDSNGRCS-CRPGVMGEK 110
Score = 96 (38.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 29/97 (29%), Positives = 38/97 (39%)
Query: 103 CVPCNCNGHADICDAESGR----CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C C C GH C G+ C C G CE CA GY+G+ A C+ C C
Sbjct: 456 CRACPC-GHGQSCSVLPGQEEVVCDHCPPGAAGPRCEFCADGYFGDP--AASQPCRPCQC 512
Query: 158 -----PNQ-GPCVQLDDDQVVCSECPRGYGGEKMSPG 188
PN G C + + + C G+ E+ G
Sbjct: 513 NSNVEPNAVGNCDRRTGECLKCIYNTAGFHCERCKDG 549
Score = 89 (36.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPC 46
RC C D G CERCA GY +A G + C C C G C
Sbjct: 379 RCQCPDGYQGQFCERCAAGYRRDAPHMGPFSICVPCNCHGGGIC 422
Score = 41 (19.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 6 ICQDNTG----GD----NCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
IC +TG GD N C G Y + C+ CPC + C
Sbjct: 421 ICDPDTGECYSGDENVGNSISCPFGSYRDPRPPH--SCRACPCGHGQSC 467
Score = 35 (17.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 175 ECPRGYGGE 183
+CP GY G+
Sbjct: 381 QCPDGYQGQ 389
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 208 (78.3 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 42/104 (40%), Positives = 53/104 (50%)
Query: 96 SGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
SG C C CNGH+D+C E+G C CQ + G+ CE+CA GYYG+A G DC+
Sbjct: 1533 SGLYLGHCELCECNGHSDLCHPETGACSQCQHHAAGEFCEQCAPGYYGDATAGTPEDCQP 1592
Query: 155 CPCPNQGP-------CVQLDDDQVVCSECPRGYGG---EKMSPG 188
C CP P C L C+ C GY G E+ +PG
Sbjct: 1593 CACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPG 1636
Score = 208 (78.3 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 44/111 (39%), Positives = 57/111 (51%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY P SG C C+C+GH ++C+ E+G C CQ +T G CE+C GYYG+A G
Sbjct: 1122 GYTRMP-SGLYLGTCERCSCHGHTEVCEPETGACQECQHHTEGPRCEQCQPGYYGDAQRG 1180
Query: 148 AVTDCKQCPC---PNQGPCVQ---LDDD-QVVCSECPRGYGG---EKMSPG 188
DC+ CPC P G LD D C C G+ G E+ +PG
Sbjct: 1181 TPHDCQPCPCHGAPAAGQATHTCFLDTDGHPTCDACSPGHSGRHCERCAPG 1231
Score = 208 (78.3 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 39/103 (37%), Positives = 48/103 (46%)
Query: 91 HHEPTSGGAF-SRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGA 148
H GG + C CNCNGHA CD G C+ CQ NT G C +C G++G+A +
Sbjct: 727 HFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGPQCNKCKAGFFGDATKAT 786
Query: 149 VTDCKQCPCPN-------QGPCVQLDDDQVVCSECPRGYGGEK 184
T C+ CPCP C D Q C C GY G +
Sbjct: 787 ATACRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRR 829
Score = 145 (56.1 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 46/162 (28%), Positives = 62/162 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC---PNQGPCVQ---LDDDQVSNLGNR 60
CQ +T G CE+C GYYG+A G DC+ CPC P G LD D G+
Sbjct: 1157 CQHHTEGPRCEQCQPGYYGDAQRGTPHDCQPCPCHGAPAAGQATHTCFLDTD-----GHP 1211
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPT--SGGAFSRCVPCNCNGHADI---C 115
T G A Y +P SGG + C C+ + C
Sbjct: 1212 TCDACSPGHSGRHCERCA----PGYYGNPSQGQPCRRSGGQLPEQIGCGCDPQGSVSNQC 1267
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
D +G+C C+ G C +C R ++ + C C C
Sbjct: 1268 DP-AGQCQCKAQVEGLTCSQC-RPHHFHLSASNPDGCLPCFC 1307
Score = 141 (54.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 42/165 (25%), Positives = 61/165 (36%)
Query: 1 MFRRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-G 58
++ C+ CQ NT G C +C G++G+A + T C+ CPCP + D + G
Sbjct: 755 VYGHCLNCQHNTEGPQCNKCKAGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTDG 814
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCN-----CNGHAD 113
T G R A GY P +C P N C+
Sbjct: 815 QATCDACAPGYTGRRCESCA---------AGYEGNPIQPNG--KCRPINQQIVRCDERGS 863
Query: 114 ICDAESGR-CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
SG C+C++N G C C G + + C +C C
Sbjct: 864 T--GSSGEACLCKNNVVGRLCNECVAGSFHLSARNP-DGCLKCFC 905
Score = 126 (49.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 52/187 (27%), Positives = 71/187 (37%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC--------PNQGPCVQLDDDQVS 55
+C C G +C+ C GY + C++C C P G C + Q
Sbjct: 1104 QCACPPGYRGPSCQDCDAGYTRMPSGLYLGTCERCSCHGHTEVCEPETGACQEC---QHH 1160
Query: 56 NLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC 115
G R + + G+ RG Q H P +G A C + +GH C
Sbjct: 1161 TEGPRCE-QCQPGYYGDAQRGTPHDCQP----CPCHGAPAAGQATHTCF-LDTDGHPT-C 1213
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC--PCPNQGPCVQLDDDQVVC 173
DA C G +CERCA GYYGN +G C++ P Q C D V
Sbjct: 1214 DA------CSPGHSGRHCERCAPGYYGNPSQGQ--PCRRSGGQLPEQIGC-GCDPQGSVS 1264
Query: 174 SEC-PRG 179
++C P G
Sbjct: 1265 NQCDPAG 1271
Score = 119 (46.9 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
CQ + G+ CE+CA GYYG+A G DC+ C CP P
Sbjct: 1562 CQHHAAGEFCEQCAPGYYGDATAGTPEDCQPCACPLTNP 1600
Score = 70 (29.7 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C+ PC N G C + VC CP G+ G +
Sbjct: 3831 CRDRPCQNGGQCQDSESSSYVCV-CPAGFTGSR 3862
Score = 58 (25.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/74 (29%), Positives = 29/74 (39%)
Query: 121 RCICQDNTGGDNCERCARG--YYGNALEGAVTDCKQCPCPN--QGP-CVQLDDDQVVCSE 175
+C+C+D GD CE + L G C CP GP C +V S+
Sbjct: 4111 QCLCRDGFKGDLCEHEENPCQLHEPCLHGGTCQGTHCLCPPGFSGPRCQHSSAHGLVESD 4170
Query: 176 CP-RGYGGEKMSPG 188
G GG +PG
Sbjct: 4171 WHLEGSGGND-APG 4183
Score = 58 (25.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/84 (23%), Positives = 25/84 (29%)
Query: 105 PCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
PC G ++ S C+C G CE + AL C C CV
Sbjct: 3835 PCQNGGQCQDSESSSYVCVCPAGFTGSRCE------HSQALH-----CHPEACGPDATCV 3883
Query: 165 QLDDDQVVCSECPRGYGGEKMSPG 188
D C G G + G
Sbjct: 3884 NRPDGHGYTCRCHLGRSGMRCEEG 3907
Score = 46 (21.3 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 26/97 (26%), Positives = 38/97 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G C +C R ++ + C C C G Q S+ R I
Sbjct: 1272 QCQCKAQVEGLTCSQC-RPHHFHLSASNPDGCLPCFC--MGVTQQC----ASSSYTRQLI 1324
Query: 64 RIKSALGGNRTRGLALTR-QTHYQLTG-YHHEPTSGG 98
+ A G +G AL Q + +LTG + EP G
Sbjct: 1325 STRFAPGD--FQGFALVNPQRNSRLTGGFSVEPVPEG 1359
Score = 43 (20.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
C++ PC + C+ + + C C G+ G+
Sbjct: 4091 CERQPCRHGATCMPAGEYEFQCL-CRDGFKGD 4121
Score = 38 (18.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPC 40
C C G +CE C ++ G + C C C
Sbjct: 710 CRCPIGYSGLSCESCD-AHFTRVPGGPYLGTCSGCNC 745
Score = 35 (17.4 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 117 AESGRCICQDNTGGDNCE 134
A+SG +C+ N D E
Sbjct: 2672 ADSGEYVCRANNNIDALE 2689
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 69/203 (33%), Positives = 85/203 (41%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG--P--CVQLDDDQVSNLGNRT 61
IC N G CE C G C QC G P C + D D V +LGN
Sbjct: 790 IC--NVQGGQCE-CKPNVVGRR-------CDQCAIGTYGFGPSGCKKCDCDAVGSLGNDC 839
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
+ + R +G+ RQ + G+ F C C CN HA+ICD SG
Sbjct: 840 DKQSGQCVC--REKGI-YGRQCNQCQPGFW-------GFPECRTCQCNDHANICDQSSGA 889
Query: 122 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP---------CVQLDD--- 168
CI C+D T G C+RC GYYG+ G CK CPCP GP C +
Sbjct: 890 CIECRDLTTGHYCDRCQDGYYGDPRLGVGIPCKPCPCPG-GPTSGYQHADTCYLRNSGNN 948
Query: 169 -DQVVCSECPRGYGGEKMSPGAQ 190
+VC+ C GY GE+ AQ
Sbjct: 949 TQDIVCN-CKSGYQGERCGECAQ 970
Score = 155 (59.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/190 (27%), Positives = 78/190 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPCP-----NQGPCVQLDDDQVSNLG 58
C NT G NCE+C +Y + + D C C C N+G C +D + +
Sbjct: 374 CMHNTQGKNCEQCKPFFYRDPRR-TIDDPHVCLPCECDKAGSQNKGICEGEEDAERGLVA 432
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADI 114
+ K+ + GNR + ++ LT E G CV C CN G + +
Sbjct: 433 GKCYC--KTNVDGNRCDRC---KNGYWNLT----ETNVDG----CVACTCNLLGTYNNEG 479
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
CD +G C C+ G+NC++C +YG L V CK C C G +
Sbjct: 480 CDKYTGMCTCKRLVTGENCDQCLPEHYG--LSEHVDGCKACDCDIGGSYDNTCEITTGQC 537
Query: 175 ECPRGYGGEK 184
+C G+ G +
Sbjct: 538 KCREGFSGRR 547
Score = 155 (59.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/190 (27%), Positives = 80/190 (42%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C C+ G+ C CA+ ++G+ E T C++C C G +D + T
Sbjct: 954 CNCKSGYQGERCGECAQNHWGSPREVGGT-CERCDC--NG---NIDMAMEGSCDAATGEC 1007
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCN---CNGHADICDAESGR 121
+K + T G Q + + GY+ + RCV CN N CD SG+
Sbjct: 1008 LKCL---HHTEGA----QCEHCVDGYYGDAKLKTC-QRCV-CNELGTNSTKGACDRVSGQ 1058
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD-DQVVCS------ 174
C C DN G C++CA ++ N GA C+ C C + G + + + C+
Sbjct: 1059 CPCHDNIIGMQCDQCAENHF-NLASGA--GCEACGCDSNGVVLNHEGVPHLQCNIFDGQC 1115
Query: 175 ECPRGYGGEK 184
+C G GG K
Sbjct: 1116 QCKPGRGGRK 1125
Score = 154 (59.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 46/143 (32%), Positives = 64/143 (44%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRT-- 61
+C C DN G C++CA ++ N GA C+ C C + G V L+ + V +L
Sbjct: 1058 QCPCHDNIIGMQCDQCAENHF-NLASGA--GCEACGCDSNG--VVLNHEGVPHLQCNIFD 1112
Query: 62 -RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI-CDAES 119
+ + K GG + Q L Y +PT+ RC CN G + C +
Sbjct: 1113 GQCQCKPGRGGRKCD------QCE-DL--YWGDPTTPDGCHRC-ECNPTGSKSLQCHRNN 1162
Query: 120 GRCICQDNTGGDNCERCARGYYG 142
G C CQ +GG C CARGY G
Sbjct: 1163 GTCECQAGSGGALCNECARGYTG 1185
Score = 150 (57.9 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 55/196 (28%), Positives = 80/196 (40%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ C +T G CE C GYYG+A + C++C C G S G R+
Sbjct: 1007 CLKCLHHTEGAQCEHCVDGYYGDA---KLKTCQRCVCNELGTN--------STKGACDRV 1055
Query: 64 RIKSALGGNRTRGLALTR--QTHYQL-TGYHHEPTSGGAFSRCVPCNCNGHADI-CDAES 119
+ N G+ + + H+ L +G E G S V N G + C+
Sbjct: 1056 SGQCPCHDNII-GMQCDQCAENHFNLASGAGCEAC--GCDSNGVVLNHEGVPHLQCNIFD 1112
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-P----------NQGPC-VQLD 167
G+C C+ GG C++C Y+G+ C +C C P N G C Q
Sbjct: 1113 GQCQCKPGRGGRKCDQCEDLYWGDPT--TPDGCHRCECNPTGSKSLQCHRNNGTCECQAG 1170
Query: 168 DDQVVCSECPRGYGGE 183
+C+EC RGY G+
Sbjct: 1171 SGGALCNECARGYTGQ 1186
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 37/139 (26%), Positives = 56/139 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ N G+ C+RC GY+ N E V C C C G D+ + + R+
Sbjct: 434 KCYCKTNVDGNRCDRCKNGYW-NLTETNVDGCVACTCNLLGTYNNEGCDKYTGMCTCKRL 492
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD-ICDAESGRC 122
G N + L HY L+ E G + C+ G D C+ +G+C
Sbjct: 493 ----VTGENCDQCLP----EHYGLS----EHVDG---CKACDCDIGGSYDNTCEITTGQC 537
Query: 123 ICQDNTGGDNCERCARGYY 141
C++ G CE +Y
Sbjct: 538 KCREGFSGRRCETADSSFY 556
>UNIPROTKB|F1NSZ5 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0050873 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 OMA:QLDDYNA
EMBL:AADN02002050 EMBL:AADN02002048 EMBL:AADN02002049
IPI:IPI00578400 Ensembl:ENSGALT00000024193 Uniprot:F1NSZ5
Length = 1766
Score = 207 (77.9 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 62/189 (32%), Positives = 86/189 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT G++CE+C G+ G+ + GA T C+ CPCP N GN R
Sbjct: 32 CVDCQRNTTGEHCEQCPDGFVGDVVGGAPTFCQPCPCPLPEAANFAVSCYRKN-GN-VRC 89
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI------CDA 117
K G A GY+ P G S C C+C+G++D CD
Sbjct: 90 VCKENYAGPNCESCAGVPP------GYYGNPLLIG--STCKKCDCSGNSDPNLIFEDCDE 141
Query: 118 ESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQ------GPCVQLDDDQ 170
+G+C C +T G CE+CA GYYG+A+ +C C C + G C L D
Sbjct: 142 VTGQCRNCLHHTTGFKCEQCAPGYYGDAI--FAKNCTACNCGGRMCDSRTGEC--LADSP 197
Query: 171 VVCS--ECP 177
+V + +CP
Sbjct: 198 LVSTGTDCP 206
Score = 184 (69.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 95 TSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCK 153
TS G +C PCNCNG+A+ C SG C+ CQ NT G++CE+C G+ G+ + GA T C+
Sbjct: 8 TSSG---KCSPCNCNGNANRCLDGSGICVDCQRNTTGEHCEQCPDGFVGDVVGGAPTFCQ 64
Query: 154 QCPCP 158
CPCP
Sbjct: 65 PCPCP 69
Score = 155 (59.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/146 (31%), Positives = 71/146 (48%)
Query: 4 RCICQDNTGGDNCERCAR---GYYGNALEGAVTDCKQCPCP-NQGPCVQLDD-DQVSNLG 58
RC+C++N G NCE CA GYYGN L T CK+C C N P + +D D+V+
Sbjct: 88 RCVCKENYAGPNCESCAGVPPGYYGNPLLIGST-CKKCDCSGNSDPNLIFEDCDEVTG-- 144
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCNGHADICDA 117
+ ++ L + T G + GY+ + F++ C CNC G +CD+
Sbjct: 145 -----QCRNCL--HHTTGFKCEQCA----PGYYGD----AIFAKNCTACNCGGR--MCDS 187
Query: 118 ESGRCICQD---NTGGD----NCERC 136
+G C+ +TG D +C++C
Sbjct: 188 RTGECLADSPLVSTGTDCPTISCDKC 213
>ZFIN|ZDB-GENE-050208-475 [details] [associations]
symbol:lama3 "laminin, alpha 3" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-050208-475 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 EMBL:BX465190 Pfam:PF02210 GO:GO:0045995
GO:GO:0005606 GeneTree:ENSGT00700000104042 IPI:IPI00994085
Ensembl:ENSDART00000126827 Bgee:F1QV32 Uniprot:F1QV32
Length = 1681
Score = 204 (76.9 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 44/107 (41%), Positives = 57/107 (53%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI------CQDNTGGDNCERCARGYYG 142
GY+ E SG RCVPCNCNG + CD +G+C+ CQ GD+CERC GYYG
Sbjct: 13 GYYRE-RSGPYKGRCVPCNCNGLSGDCDPHTGKCLLKYFTACQHKYAGDHCERCMEGYYG 71
Query: 143 NALEGAVTDCKQCPCPNQGP-------CVQLDDDQVVCSECPRGYGG 182
+A+ + C+ CPCP P C+ + D+ C C GY G
Sbjct: 72 SAI---LRTCRMCPCPLTDPAKSFAVGCLGVGDE-FECL-CKPGYSG 113
Score = 171 (65.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/130 (32%), Positives = 56/130 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ GD+CERC GYYG+A+ + C+ CPCP P + +G+ K
Sbjct: 53 CQHKYAGDHCERCMEGYYGSAI---LRTCRMCPCPLTDPAKSFAVGCLG-VGDEFECLCK 108
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQD 126
G R AL GY+ P + C PC+C H +CD +G C D
Sbjct: 109 PGYSGVRCERCAL---------GYYGSPLAERG--SCQPCDCE-HGYVCDPLTGDCYEAD 156
Query: 127 NTGGDNCERC 136
+ DNC C
Sbjct: 157 DPDTDNCFDC 166
>UNIPROTKB|Q13753 [details] [associations]
symbol:LAMC2 "Laminin subunit gamma-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779 GO:GO:0005938
GO:GO:0048471 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 GO:GO:0005615 GO:GO:0008201
GO:GO:0007155 EMBL:CH471067 PROSITE:PS00022 Reactome:REACT_111155
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0031581 Orphanet:79402
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 MIM:226700 Orphanet:79404 GO:GO:0005610
GO:GO:0005607 EMBL:AL354953 EMBL:Z15008 EMBL:Z15009 EMBL:X73902
EMBL:U31201 EMBL:U31178 EMBL:U31179 EMBL:U31180 EMBL:U31181
EMBL:U31182 EMBL:U31183 EMBL:U31184 EMBL:U31186 EMBL:U31187
EMBL:U31188 EMBL:U31189 EMBL:U31190 EMBL:U31191 EMBL:U31192
EMBL:U31193 EMBL:U31194 EMBL:U31195 EMBL:U31196 EMBL:U31197
EMBL:U31198 EMBL:U31199 EMBL:U31200 EMBL:BC113378 IPI:IPI00015117
IPI:IPI00220572 PIR:A44018 RefSeq:NP_005553.2 RefSeq:NP_061486.2
UniGene:Hs.591484 ProteinModelPortal:Q13753 SMR:Q13753 DIP:DIP-190N
MINT:MINT-4053464 STRING:Q13753 Allergome:8331 PhosphoSite:Q13753
DMDM:90185107 PaxDb:Q13753 PeptideAtlas:Q13753 PRIDE:Q13753
Ensembl:ENST00000264144 Ensembl:ENST00000493293 GeneID:3918
KEGG:hsa:3918 UCSC:uc001gpz.4 UCSC:uc001gqa.2 CTD:3918
GeneCards:GC01P183155 HGNC:HGNC:6493 HPA:CAB004257 HPA:HPA024638
MIM:150292 neXtProt:NX_Q13753 PharmGKB:PA30281 eggNOG:NOG285700
HOVERGEN:HBG062127 InParanoid:Q13753 KO:K06246 OMA:DRCLPCN
OrthoDB:EOG4ZCT3N PhylomeDB:Q13753 ChiTaRS:LAMC2 GenomeRNAi:3918
NextBio:15391 PMAP-CutDB:Q13753 ArrayExpress:Q13753 Bgee:Q13753
CleanEx:HS_LAMC2 Genevestigator:Q13753 GermOnline:ENSG00000058085
Uniprot:Q13753
Length = 1193
Score = 179 (68.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 34/98 (34%), Positives = 47/98 (47%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+GY + G F C+PCNC G CD ++G C D C C G+Y + +
Sbjct: 398 SGYKRDSARLGPFGTCIPCNCQG-GGACDPDTGDCYSGDENPDIECADCPIGFYNDPHDP 456
Query: 148 AVTDCKQCPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
CK CPC N C V + ++VVC+ CP G G +
Sbjct: 457 R--SCKPCPCHNGFSCSVMPETEEVVCNNCPPGVTGAR 492
Score = 160 (61.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 50/161 (31%), Positives = 70/161 (43%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
RC+ C DNT G +CE+C G+Y + C C C ++G D N R
Sbjct: 52 RCLNCNDNTDGIHCEKCKNGFYRHRERDR---CLPCNCNSKGSLSARCD-------NSGR 101
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV---PCNCN--GHADICDA 117
K + G R L G+H +G + + C+C+ G A CDA
Sbjct: 102 CSCKPGVTGARCDRC---------LPGFHMLTDAGCTQDQRLLDSKCDCDPAGIAGPCDA 152
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC 157
GRC+C+ G+ C+RC GYY L+G + C QC C
Sbjct: 153 --GRCVCKPAVTGERCDRCRSGYYN--LDGGNPEGCTQCFC 189
Score = 154 (59.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 40/111 (36%), Positives = 50/111 (45%)
Query: 89 GYHHEPTSG-GAFSRCVPCNCNGHADI-----CDAESGRCI-CQDNTGGDNCERCARGYY 141
GY +P G C PC CN + D CD +GRC+ C NT G C++C GY+
Sbjct: 499 GYFGDPFGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAGIYCDQCKAGYF 558
Query: 142 GNALEGAVTD-CKQCPCPNQG--PCVQLDDDQVVCSECPRGYGGEKMSPGA 189
G+ L D C+ C C G P D VC P G+GG GA
Sbjct: 559 GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCVCK--P-GFGGPNCEHGA 606
Score = 143 (55.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 40/135 (29%), Positives = 54/135 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNAL--EGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C G CE CA GY+G+ G V C+ C C N D S GN R+
Sbjct: 484 CPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNV------DPSAS--GNCDRLT 535
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRC 122
+ + T G+ + GY +P + +C CNCN G + G C
Sbjct: 536 GRCLKCIHNTAGIYCDQCK----AGYFGDPLAPNPADKCRACNCNPMGSEPVGCRSDGTC 591
Query: 123 ICQDNTGGDNCERCA 137
+C+ GG NCE A
Sbjct: 592 VCKPGFGGPNCEHGA 606
Score = 107 (42.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/103 (28%), Positives = 45/103 (43%)
Query: 89 GYHHEPTSGGAFSRCVPCNC-NGHADICDAESGRCICQD---NTGGDNCERCARGYYGNA 144
G++++P + C PC C NG + E+ +C + G CE CA GY+G+
Sbjct: 448 GFYNDPHDPRS---CKPCPCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGYFGDP 504
Query: 145 L--EGAVTDCKQCPCPNQ-GPCVQLDDDQVV--CSECPRGYGG 182
G V C+ C C N P + D++ C +C G
Sbjct: 505 FGEHGPVRPCQPCQCNNNVDPSASGNCDRLTGRCLKCIHNTAG 547
Score = 95 (38.5 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 121 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC-------PNQGPCVQLDDD-QV 171
+CIC G C+ CA GY ++ G C C C P+ G C D++ +
Sbjct: 381 QCICPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCNCQGGGACDPDTGDCYSGDENPDI 440
Query: 172 VCSECPRGYGGEKMSP 187
C++CP G+ + P
Sbjct: 441 ECADCPIGFYNDPHDP 456
Score = 73 (30.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPC 46
+CIC G C+ CA GY ++ G C C C G C
Sbjct: 381 QCICPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCNCQGGGAC 424
Score = 71 (30.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 30/112 (26%), Positives = 43/112 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC C+ G C+RC G++ G D Q ++ C D ++ + R
Sbjct: 101 RCSCKPGVTGARCDRCLPGFHMLTDAGCTQD--QRLLDSKCDC---DPAGIAGPCDAGRC 155
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC 115
K A+ G R R +Y L G + E G C C C GH+ C
Sbjct: 156 VCKPAVTGERCDRC---RSGYYNLDGGNPE----G----CTQCFCYGHSASC 196
Score = 63 (27.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQV 54
C D C C G+Y + + CK CPC N C V + ++V
Sbjct: 431 CYSGDENPDIECADCPIGFYNDPHDPR--SCKPCPCHNGFSCSVMPETEEV 479
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 195 (73.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 53/181 (29%), Positives = 77/181 (42%)
Query: 4 RCICQDNTGGDNCERCARGYY------GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C C+ +T GD+CERC R Y + L G C +C C D+
Sbjct: 277 KCSCRHHTAGDHCERCHRLYNDRPWRAADGLTGEANQCVECKCNGHAESCHFDESIWLRS 336
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGG-AFSRCVPCNCNGH--ADI 114
G + + L + T G H Q +G++ +P A C PC CN H +
Sbjct: 337 GQQHG-GVCDCL--HNTTG---QHCQHCQ-SGFYRDPEKPSTAPDSCTPCMCN-HVGSSY 388
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
C ++G C+C+ G +CE+C GY+G G CK C C G C D ++ S
Sbjct: 389 CKPDNGECVCKPGVAGRHCEQCMLGYWGLDEYG----CKPCQCA--GDCDPYTGDCMIRS 442
Query: 175 E 175
E
Sbjct: 443 E 443
>ZFIN|ZDB-GENE-030131-230 [details] [associations]
symbol:si:ch211-241e1.3 "si:ch211-241e1.3"
species:7955 "Danio rerio" [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 ZFIN:ZDB-GENE-030131-230 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 EMBL:AL935300 GO:GO:0005606
GeneTree:ENSGT00700000104042 IPI:IPI00484822
Ensembl:ENSDART00000058281 ArrayExpress:F1R4X8 Bgee:F1R4X8
Uniprot:F1R4X8
Length = 1368
Score = 197 (74.4 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 40/101 (39%), Positives = 53/101 (52%)
Query: 92 HEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVT 150
H G F RCVPC+CNGH++ C+ +GRC+ C DNT G CE C G+Y + A
Sbjct: 112 HYLDRSGLFPRCVPCSCNGHSNECEENTGRCLNCADNTAGQRCELCKEGFYWSE---ARR 168
Query: 151 DCKQCPCP--NQGP-----CVQLDDDQVVCSECPRGYGGEK 184
C CPCP NQ C + ++ C C G+ GE+
Sbjct: 169 KCTACPCPLGNQDNNFAVGCTETQS-RIQCV-CKTGHAGER 207
Score = 122 (48.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 42/139 (30%), Positives = 57/139 (41%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
RC+ C DNT G CE C G+Y + A C CPCP Q ++ V ++R
Sbjct: 141 RCLNCADNTAGQRCELCKEGFYWSE---ARRKCTACPCPLGN---QDNNFAVGCTETQSR 194
Query: 63 IRI--KSALGGNRTRGLALTRQTHYQLTGYHHEP-TSGGAFSRCVPCNCNGH-ADICDAE 118
I+ K+ G R A +GY+ +P GG C PC C G+ D
Sbjct: 195 IQCVCKTGHAGERCERCA---------SGYYGDPLVYGGG---CRPCRCAGNLCDSKTGA 242
Query: 119 SGRCI-CQDNTGGDNCERC 136
+ QD + CE C
Sbjct: 243 CRNSLELQDTNTEEQCEEC 261
>MGI|MGI:1341628 [details] [associations]
symbol:Atrn "attractin" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IMP] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IMP] [GO:0042552 "myelination" evidence=IMP]
[GO:0043473 "pigmentation" evidence=IMP] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 MGI:MGI:1341628
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014
GO:GO:0004872 EMBL:CH466519 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 Gene3D:2.120.10.80 GO:GO:0021549 PROSITE:PS01186
EMBL:AL833771 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 GO:GO:0043473
eggNOG:NOG242225 HOVERGEN:HBG004312 InterPro:IPR003659
SMART:SM00423 GeneTree:ENSGT00390000001118 HOGENOM:HOG000231727
CTD:8455 OMA:NPLKGTC OrthoDB:EOG4R23SZ EMBL:AF116897 EMBL:AF119821
EMBL:AH007542 IPI:IPI00224752 RefSeq:NP_033860.2 UniGene:Mm.119936
ProteinModelPortal:Q9WU60 SMR:Q9WU60 STRING:Q9WU60
PhosphoSite:Q9WU60 PaxDb:Q9WU60 PRIDE:Q9WU60
Ensembl:ENSMUST00000028781 GeneID:11990 KEGG:mmu:11990
InParanoid:A2AP43 NextBio:280155 Bgee:Q9WU60 CleanEx:MM_ATRN
Genevestigator:Q9WU60 GermOnline:ENSMUSG00000027312 Uniprot:Q9WU60
Length = 1428
Score = 156 (60.0 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++G++ +PT+GG +C PC CNGHA +C+ +G+C C GD C+
Sbjct: 1082 LTTGKHCETCISGFYGDPTNGG---KCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQL 1138
Query: 136 CA--RGYYGNALEG 147
C Y GN L+G
Sbjct: 1139 CEVENRYQGNPLKG 1152
Score = 124 (48.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F C C CNGH+ C +S C+D T G +CE C G+YG+ G C+ C C
Sbjct: 1055 SFIHCPACQCNGHSK-CINQSICEKCEDLTTGKHCETCISGFYGDPTNGG--KCQPCKCN 1111
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 1112 GHASLCNTNTGKCFCTT--KGVKGDE 1135
Score = 53 (23.7 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD 34
+C+C G+ C+ C + G VTD
Sbjct: 116 QCVCPTGWVGEQCQHCGGRFRLTGSSGFVTD 146
Score = 52 (23.4 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 5 CICQDNTGGDNCE--RCAR--GYYGNALEGAVTDCKQCPC-PN-QGP 45
C C +N G++C+ C G+ + A +D + C C P+ QGP
Sbjct: 270 CECSENWKGESCDIPHCTDNCGFPHRGICNA-SDTRGCSCFPHWQGP 315
Score = 37 (18.1 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 147 GAVTDCKQCPCPNQGPCV 164
GAV + KQ P G C+
Sbjct: 1411 GAVRNRKQQPPAQPGTCI 1428
Score = 35 (17.4 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 7 CQDNTGGDN-C-ERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C NT + C + C + + EG ++ K CP P
Sbjct: 712 CTANTNDCHWCNDHCVPVNH-SCTEGQISIAKYESCPKDNP 751
>UNIPROTKB|Q8MJ16 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 HSSP:P02468 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OMA:NPLKGTC EMBL:DAAA02036180
EMBL:DAAA02036185 EMBL:DAAA02036181 EMBL:DAAA02036182
EMBL:DAAA02036183 EMBL:DAAA02036184 EMBL:AF531101 IPI:IPI00697240
IPI:IPI01002340 RefSeq:NP_776420.1 UniGene:Bt.12296 STRING:Q8MJ16
Ensembl:ENSBTAT00000039853 GeneID:281017 KEGG:bta:281017
InParanoid:Q8MJ16 NextBio:20805109 Uniprot:Q8MJ16
Length = 1415
Score = 156 (60.0 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++G++ +PT+GG +C PC CNGHA +C+ +G+C C GD C+
Sbjct: 1069 LTTGKHCETCISGFYGDPTNGG---KCQPCRCNGHASLCNTNTGKCFCTTKGVKGDECQL 1125
Query: 136 CA--RGYYGNALEG 147
C Y GN L+G
Sbjct: 1126 CEVENRYQGNPLKG 1139
Score = 118 (46.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F C C CNGH+ C +S C++ T G +CE C G+YG+ G C+ C C
Sbjct: 1042 SFIHCPACQCNGHSK-CINQSICEKCENLTTGKHCETCISGFYGDPTNGG--KCQPCRCN 1098
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 1099 GHASLCNTNTGKCFCTT--KGVKGDE 1122
Score = 51 (23.0 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD 34
+C+C G+ C+ C + G +TD
Sbjct: 104 QCVCPAGWVGEQCQHCGGRFRLTGSSGFITD 134
Score = 45 (20.9 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 4 RCICQDNTGGDNCE--RCAR--GYYGNALEGAVTDCKQCPCPN--QGP 45
+C C +N G+ C+ C G+ + + +D + C C + QGP
Sbjct: 257 QCECSENWKGEACDIPHCVNNCGFPHRGICNS-SDVRGCSCFSEWQGP 303
Score = 37 (18.1 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 147 GAVTDCKQCPCPNQGPCV 164
GAV + KQ P G C+
Sbjct: 1398 GAVRNRKQQPPAQPGTCI 1415
>UNIPROTKB|F1S8B6 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:CU302393
EMBL:CU468397 Ensembl:ENSSSCT00000007826 Uniprot:F1S8B6
Length = 1416
Score = 156 (60.0 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++G++ +PT+GG +C PC CNGHA +C+ +G+C C GD C+
Sbjct: 1070 LTTGRHCETCISGFYGDPTNGG---KCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQL 1126
Query: 136 CA--RGYYGNALEG 147
C Y GN L+G
Sbjct: 1127 CEVENRYQGNPLKG 1140
Score = 119 (46.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F C C CNGH+ C +S C++ T G +CE C G+YG+ G C+ C C
Sbjct: 1043 SFIHCPACQCNGHSK-CVNQSVCEKCENLTTGRHCETCISGFYGDPTNGG--KCQPCKCN 1099
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 1100 GHASLCNTNTGKCFCTT--KGVKGDE 1123
Score = 51 (23.0 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD 34
+C+C G+ C+ C + G +TD
Sbjct: 104 QCVCPAGWVGEQCQHCGGRFRLTGSSGFITD 134
Score = 45 (20.9 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 4 RCICQDNTGGDNCE--RCAR--GYYGNALEGAVTDCKQCPCPN--QGP 45
+C C +N G+ C+ C G+ + + +D + C C + QGP
Sbjct: 257 QCECSENWKGEACDIPHCVNNCGFPHRGICNS-SDVRGCSCFSEWQGP 303
Score = 37 (18.1 bits), Expect = 6.9e-14, Sum P(3) = 6.9e-14
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 147 GAVTDCKQCPCPNQGPCV 164
GAV + KQ P G C+
Sbjct: 1399 GAVRNRKQQPPAQPGTCI 1416
>UNIPROTKB|O75882 [details] [associations]
symbol:ATRN "Attractin" species:9606 "Homo sapiens"
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0005737
GO:GO:0005615 GO:GO:0005887 GO:GO:0006979 GO:GO:0030246
GO:GO:0006954 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0040014
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
HOVERGEN:HBG004312 InterPro:IPR003659 SMART:SM00423 EMBL:AF218915
EMBL:AF218889 EMBL:AF218890 EMBL:AF218891 EMBL:AF218892
EMBL:AF218893 EMBL:AF218894 EMBL:AF218895 EMBL:AF218896
EMBL:AF218897 EMBL:AF218898 EMBL:AF218899 EMBL:AF218900
EMBL:AF218901 EMBL:AF218902 EMBL:AF218903 EMBL:AF218904
EMBL:AF218905 EMBL:AF218906 EMBL:AF218907 EMBL:AF218908
EMBL:AF218909 EMBL:AF218911 EMBL:AF218912 EMBL:AF218913
EMBL:AF218914 EMBL:AF218910 EMBL:AF106861 EMBL:AK293010
EMBL:AL109805 EMBL:AL132773 EMBL:AL353193 EMBL:BC101705
EMBL:AB011120 IPI:IPI00027235 IPI:IPI00162735 IPI:IPI00939169
RefSeq:NP_001193976.1 RefSeq:NP_647537.1 RefSeq:NP_647538.1
UniGene:Hs.276252 ProteinModelPortal:O75882 SMR:O75882
IntAct:O75882 STRING:O75882 PhosphoSite:O75882 PaxDb:O75882
PRIDE:O75882 Ensembl:ENST00000262919 Ensembl:ENST00000446916
GeneID:8455 KEGG:hsa:8455 UCSC:uc002wil.2 UCSC:uc002wim.2
UCSC:uc021vzz.1 CTD:8455 GeneCards:GC20P003451 HGNC:HGNC:885
HPA:HPA008853 MIM:603130 neXtProt:NX_O75882 PharmGKB:PA25178
InParanoid:O75882 OMA:NPLKGTC OrthoDB:EOG4R23SZ PhylomeDB:O75882
ChiTaRS:ATRN GenomeRNAi:8455 NextBio:31642 ArrayExpress:O75882
Bgee:O75882 Genevestigator:O75882 GermOnline:ENSG00000088812
Uniprot:O75882
Length = 1429
Score = 155 (59.6 bits), Expect = 7.1e-14, Sum P(3) = 7.1e-14
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++G++ +PT+GG +C PC CNGHA +C+ +G+C C GD C+
Sbjct: 1083 LTTGKHCETCISGFYGDPTNGG---KCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQL 1139
Query: 136 CA--RGYYGNALEG 147
C Y GN L G
Sbjct: 1140 CEVENRYQGNPLRG 1153
Score = 119 (46.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F C C CNGH+ C +S C++ T G +CE C G+YG+ G C+ C C
Sbjct: 1056 SFIHCPACQCNGHSK-CINQSICEKCENLTTGKHCETCISGFYGDPTNGG--KCQPCKCN 1112
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 1113 GHASLCNTNTGKCFCTT--KGVKGDE 1136
Score = 52 (23.4 bits), Expect = 7.1e-14, Sum P(3) = 7.1e-14
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD 34
+C+C G+ C+ C + G VTD
Sbjct: 117 QCVCPAGWVGEQCQHCGGRFRLTGSSGFVTD 147
Score = 42 (19.8 bits), Expect = 7.4e-13, Sum P(3) = 7.4e-13
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 5 CICQDNTGGDNCE--RCAR--GYYGNALEGAVTDCKQCPCPN--QGP 45
C C +N G+ C+ C G+ + + +D + C C + QGP
Sbjct: 271 CECSENWKGEACDIPHCTDNCGFPHRGICNS-SDVRGCSCFSDWQGP 316
Score = 37 (18.1 bits), Expect = 7.1e-14, Sum P(3) = 7.1e-14
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 147 GAVTDCKQCPCPNQGPCV 164
GAV + KQ P G C+
Sbjct: 1412 GAVRNRKQQPPAQPGTCI 1429
>UNIPROTKB|E1B7Q3 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008201 "heparin binding" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:DAAA02043571 IPI:IPI00715486
Ensembl:ENSBTAT00000061289 ArrayExpress:E1B7Q3 Uniprot:E1B7Q3
Length = 1193
Score = 190 (71.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 36/102 (35%), Positives = 49/102 (48%)
Query: 84 HYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGN 143
H +GY + G F C+PCNC G CD ++G C D CE C G+Y +
Sbjct: 394 HECASGYKRDSARLGPFGTCIPCNCQG-GGACDPDTGDCYSGDENPDIECEDCPIGFYND 452
Query: 144 ALEGAVTDCKQCPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
+ CK CPC N C V + ++VVC+ CP G G +
Sbjct: 453 PHDPG--SCKPCPCRNGFSCSVMPETEEVVCNNCPHGITGAR 492
Score = 173 (66.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 51/174 (29%), Positives = 74/174 (42%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
RC+ C DNTGG +CERC G+Y + C C C ++G + N G R
Sbjct: 52 RCLHCSDNTGGIHCERCKEGFYRHRERDR---CLPCNCNSKGSL----SPRCDNTG---R 101
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV---PCNCNGHADICDAES 119
K + G+R L G+H +G R + C+C+ + ++
Sbjct: 102 CSCKPGVTGDRCDRC---------LPGFHTLTDAGCTQDRKLLDSKCDCDPAGIVGPCDT 152
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVV 172
GRC+C+ G+ C+RC GYY L+G + C QC C Q D V
Sbjct: 153 GRCVCKPAVTGERCDRCRPGYYH--LDGRNPEGCTQCFCYGHSASCQSSGDYSV 204
Score = 173 (66.0 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 54/188 (28%), Positives = 73/188 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C D CE C G+Y + + CK CPC N C + + +
Sbjct: 431 CYSGDENPDIECEDCPIGFYNDPHDPG--SCKPCPCRNGFSCSVMPETE----------- 477
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCNGHADI-----CDAE 118
+ N G+ R GY +P G C PC C+ + D CD
Sbjct: 478 --EVVCNNCPHGITGAR-CELCADGYFGDPFGEHGPVRPCQPCQCSDNVDPSAPGNCDRL 534
Query: 119 SGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQG--PCVQLDDDQVVCS 174
+GRC+ C NT G +C++C GYYG+ L D C+ C C G P D VC
Sbjct: 535 TGRCLKCLHNTTGAHCDQCKAGYYGDPLAPNPADKCRACNCNPMGSEPVECRSDGSCVCK 594
Query: 175 ECPRGYGG 182
P G+ G
Sbjct: 595 --P-GFDG 599
Score = 143 (55.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/94 (32%), Positives = 42/94 (44%)
Query: 102 RCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCK----Q 154
RC+PCNCN + CD +GRC C+ GD C+RC G++ G D K +
Sbjct: 80 RCLPCNCNSKGSLSPRCD-NTGRCSCKPGVTGDRCDRCLPGFHTLTDAGCTQDRKLLDSK 138
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
C C G D + VC G ++ PG
Sbjct: 139 CDCDPAGIVGPCDTGRCVCKPAVTGERCDRCRPG 172
Score = 130 (50.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 39/135 (28%), Positives = 54/135 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNAL--EGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C G CE CA GY+G+ G V C+ C C D+ S GN R+
Sbjct: 484 CPHGITGARCELCADGYFGDPFGEHGPVRPCQPCQCS--------DNVDPSAPGNCDRLT 535
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADICDAESGRC 122
+ + T G A Q GY+ +P + +C CNCN G + G C
Sbjct: 536 GRCLKCLHNTTG-AHCDQCK---AGYYGDPLAPNPADKCRACNCNPMGSEPVECRSDGSC 591
Query: 123 ICQDNTGGDNCERCA 137
+C+ G NC+ A
Sbjct: 592 VCKPGFDGLNCDHAA 606
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 35/96 (36%), Positives = 47/96 (48%)
Query: 99 AFSRCVPCNCNGHADIC--DAE----SG---RCI-CQDNTGGDNCERCARGYYGNALEGA 148
A SR C+CNG + C D E +G RC+ C DNTGG +CERC G+Y +
Sbjct: 21 ANSRTPVCDCNGKSRQCIFDQELHRLTGNGFRCLHCSDNTGGIHCERCKEGFYRHRERDR 80
Query: 149 VTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C C C ++G D+ CS C G G++
Sbjct: 81 ---CLPCNCNSKGSLSPRCDNTGRCS-CKPGVTGDR 112
Score = 45 (20.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 173 CSECPRGYGGEKMSP 187
C +C GY G+ ++P
Sbjct: 550 CDQCKAGYYGDPLAP 564
>RGD|69063 [details] [associations]
symbol:Atrn "attractin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004872 "receptor
activity" evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0040014 "regulation of
multicellular organism growth" evidence=IEA;ISO] [GO:0042552
"myelination" evidence=ISO] [GO:0043473 "pigmentation" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034 SMART:SM00181
RGD:69063 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0040014 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OrthoDB:EOG4R23SZ EMBL:AB038387
EMBL:AB038388 EMBL:AB049248 IPI:IPI00194733 IPI:IPI00553894
RefSeq:NP_112641.1 UniGene:Rn.53846 ProteinModelPortal:Q99J86
STRING:Q99J86 PhosphoSite:Q99J86 PRIDE:Q99J86
Ensembl:ENSRNOT00000028847 GeneID:83526 KEGG:rno:83526
UCSC:RGD:69063 InParanoid:Q99J86 NextBio:616013
Genevestigator:Q99J86 Uniprot:Q99J86
Length = 1432
Score = 152 (58.6 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++G++ +PT+GG +C PC CNGHA +C+ +G+C C G+ C+
Sbjct: 1086 LTTGKHCETCISGFYGDPTNGG---KCQPCKCNGHASLCNTNTGKCFCTTKGVKGEECQL 1142
Query: 136 CA--RGYYGNALEG 147
C Y GN L+G
Sbjct: 1143 CEVENRYQGNPLKG 1156
Score = 127 (49.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 27/86 (31%), Positives = 40/86 (46%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F C C CNGH+ C +S C+D T G +CE C G+YG+ G C+ C C
Sbjct: 1059 SFIHCPACQCNGHSK-CINQSICEKCEDLTTGKHCETCISGFYGDPTNGG--KCQPCKCN 1115
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G GE+
Sbjct: 1116 GHASLCNTNTGKCFCTT--KGVKGEE 1139
Score = 53 (23.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD 34
+C+C G+ C+ C + G VTD
Sbjct: 120 QCVCPTGWVGEQCQHCGGRFRLTGSSGFVTD 150
Score = 52 (23.4 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 5 CICQDNTGGDNCE--RCAR--GYYGNALEGAVTDCKQCPC-PN-QGP 45
C C +N G++C+ C G+ + A +D + C C P+ QGP
Sbjct: 274 CECSENWKGESCDIPHCTDNCGFPHRGICNA-SDTRGCSCFPHWQGP 319
Score = 37 (18.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 147 GAVTDCKQCPCPNQGPCV 164
GAV + KQ P G C+
Sbjct: 1415 GAVRNRKQQPPAQPGTCI 1432
Score = 35 (17.4 bits), Expect = 7.8e-12, Sum P(3) = 7.8e-12
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 7 CQDNTGGDN-C-ERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C NT + C + C + + EG ++ K CP P
Sbjct: 716 CTANTNDCHWCNDHCVPVNH-SCTEGQISIAKYDNCPKDNP 755
>UNIPROTKB|K7GNE0 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU302393 EMBL:CU468397
Ensembl:ENSSSCT00000035365 Uniprot:K7GNE0
Length = 1260
Score = 156 (60.0 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++G++ +PT+GG +C PC CNGHA +C+ +G+C C GD C+
Sbjct: 914 LTTGRHCETCISGFYGDPTNGG---KCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQL 970
Query: 136 CA--RGYYGNALEG 147
C Y GN L+G
Sbjct: 971 CEVENRYQGNPLKG 984
Score = 119 (46.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F C C CNGH+ C +S C++ T G +CE C G+YG+ G C+ C C
Sbjct: 887 SFIHCPACQCNGHSK-CVNQSVCEKCENLTTGRHCETCISGFYGDPTNGG--KCQPCKCN 943
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 944 GHASLCNTNTGKCFCTT--KGVKGDE 967
Score = 45 (20.9 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 4 RCICQDNTGGDNCE--RCAR--GYYGNALEGAVTDCKQCPCPN--QGP 45
+C C +N G+ C+ C G+ + + +D + C C + QGP
Sbjct: 101 QCECSENWKGEACDIPHCVNNCGFPHRGICNS-SDVRGCSCFSEWQGP 147
Score = 37 (18.1 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 147 GAVTDCKQCPCPNQGPCV 164
GAV + KQ P G C+
Sbjct: 1243 GAVRNRKQQPPAQPGTCI 1260
>UNIPROTKB|F1N805 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
EMBL:AADN02014130 EMBL:AADN02014129 IPI:IPI00818986
ProteinModelPortal:F1N805 Ensembl:ENSGALT00000036243
ArrayExpress:F1N805 Uniprot:F1N805
Length = 560
Score = 183 (69.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 48/169 (28%), Positives = 70/169 (41%)
Query: 4 RCICQDNTGGDNCERCARGYY------GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT GD+CE+CA Y G+ GA +CK+C C N D
Sbjct: 237 KCVCRHNTAGDHCEKCAPLYNDQPWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLAS 296
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADI- 114
G R+ + + +Y+ G +P S C PC+C G A+
Sbjct: 297 GKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRG---KPMSSAEV--CKPCSCQPMGSANAT 351
Query: 115 ------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C ++G C C+ G NC+RC GY+G G C+ C C
Sbjct: 352 FSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENG----CRPCDC 396
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 106 CNCNGHADICDAES---------------GRCICQDNTGGDNCERCARGYY------GNA 144
C CNGHA+ C+ + G+C+C+ NT GD+CE+CA Y G+
Sbjct: 207 CFCNGHAEECELANRTAYNSASYVKHQVHGKCVCRHNTAGDHCEKCAPLYNDQPWKPGDG 266
Query: 145 LEGAVTDCKQCPCPNQGPCVQLD 167
GA +CK+C C N D
Sbjct: 267 KTGAPNECKKCRCHNHADSCHFD 289
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 31/86 (36%), Positives = 39/86 (45%)
Query: 93 EPTSG--GAFSRCVPCNCNGHADICDAE------SGR-----CI-CQDNTGGDNCERCAR 138
+P G GA + C C C+ HAD C + SG+ C C+ NT G C+RC
Sbjct: 262 KPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKP 321
Query: 139 GYY---GNALEGAVTDCKQCPCPNQG 161
GYY G + A CK C C G
Sbjct: 322 GYYRDRGKPMSSAEV-CKPCSCQPMG 346
Score = 39 (18.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 92 HEPTSGGAFSRCVPCNCN 109
H + G RC CN N
Sbjct: 43 HPASHGCGQPRCTKCNAN 60
>UNIPROTKB|F1LWS0 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
InterPro:IPR000034 Pfam:PF00052 PROSITE:PS51115 GO:GO:0005606
IPI:IPI00566251 Ensembl:ENSRNOT00000051597 ArrayExpress:F1LWS0
Uniprot:F1LWS0
Length = 1728
Score = 189 (71.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 33/71 (46%), Positives = 41/71 (57%)
Query: 89 GYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEG 147
GY+ + T G RCVPC C+GH+D C SG C+ CQ NT GD CERC G+ +
Sbjct: 91 GYYRD-TKGLFLGRCVPCQCHGHSDRCLPGSGTCVGCQHNTEGDQCERCRPGFVSSDPSD 149
Query: 148 AVTDCKQCPCP 158
+ C CPCP
Sbjct: 150 PASPCVSCPCP 160
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 44/183 (24%), Positives = 68/183 (37%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
C+ CQ NT GD CERC G+ + + C CPCP P D + G R+
Sbjct: 123 CVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPCPLAVPSNNFADGCILRNGRTQRV 182
Query: 64 RIKSALGGNRTRGL--------ALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC 115
++ G + +G A + + Q H P + G +C+ C G+ +
Sbjct: 183 -LEGHFGFEQCQGCHPCACGPAAEGSECNPQTGQCHCRPGTTGP--QCLEC-APGYWGLP 238
Query: 116 DAESGRCICQDNTGGDNCERCA--RGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+ RC C + RC G G + + Q P P + + + VC
Sbjct: 239 EKGCRRCQCPRGHCDPHTGRCTCPPGLSGERCD-TCSQQHQVPVPGRPGSHGIHCE--VC 295
Query: 174 SEC 176
C
Sbjct: 296 DHC 298
>UNIPROTKB|F1P486 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02014130
EMBL:AADN02014129 IPI:IPI00581824 Ensembl:ENSGALT00000010226
OMA:NCTATFG ArrayExpress:F1P486 Uniprot:F1P486
Length = 613
Score = 183 (69.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 48/169 (28%), Positives = 70/169 (41%)
Query: 4 RCICQDNTGGDNCERCARGYY------GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT GD+CE+CA Y G+ GA +CK+C C N D
Sbjct: 270 KCVCRHNTAGDHCEKCAPLYNDQPWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLAS 329
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHADI- 114
G R+ + + +Y+ G +P S C PC+C G A+
Sbjct: 330 GKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRG---KPMSSAEV--CKPCSCQPMGSANAT 384
Query: 115 ------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C ++G C C+ G NC+RC GY+G G C+ C C
Sbjct: 385 FSRSWRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENG----CRPCDC 429
Score = 129 (50.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 106 CNCNGHADICD---------AES------GRCICQDNTGGDNCERCARGYY------GNA 144
C CNGHA+ C+ A+S G+C+C+ NT GD+CE+CA Y G+
Sbjct: 240 CFCNGHAEECELANRTVPAKAQSRLHKVHGKCVCRHNTAGDHCEKCAPLYNDQPWKPGDG 299
Query: 145 LEGAVTDCKQCPCPNQGPCVQLD 167
GA +CK+C C N D
Sbjct: 300 KTGAPNECKKCRCHNHADSCHFD 322
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 31/86 (36%), Positives = 39/86 (45%)
Query: 93 EPTSG--GAFSRCVPCNCNGHADICDAE------SGR-----CI-CQDNTGGDNCERCAR 138
+P G GA + C C C+ HAD C + SG+ C C+ NT G C+RC
Sbjct: 295 KPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKP 354
Query: 139 GYY---GNALEGAVTDCKQCPCPNQG 161
GYY G + A CK C C G
Sbjct: 355 GYYRDRGKPMSSAEV-CKPCSCQPMG 379
Score = 39 (18.8 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 92 HEPTSGGAFSRCVPCNCN 109
H + G RC CN N
Sbjct: 44 HPASHGCGQPRCTKCNAN 61
>UNIPROTKB|F1Q117 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0016021
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:8455 OMA:NPLKGTC EMBL:AAEX03013830
EMBL:AAEX03013831 RefSeq:XP_534360.2 Ensembl:ENSCAFT00000010258
GeneID:477170 KEGG:cfa:477170 Uniprot:F1Q117
Length = 1417
Score = 159 (61.0 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++G++ +PT+GG RC PC CNGHA +C+ +G+C C GD C+
Sbjct: 1071 LTTGKHCETCISGFYGDPTNGG---RCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQL 1127
Query: 136 CA--RGYYGNALEG 147
C Y GN L+G
Sbjct: 1128 CEVENRYQGNPLKG 1141
Score = 118 (46.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F C C CNGH+ C +S C++ T G +CE C G+YG+ G C+ C C
Sbjct: 1044 SFIHCPACQCNGHSK-CINQSICEKCENLTTGKHCETCISGFYGDPTNGG--RCQPCKCN 1100
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 1101 GHASLCNTNTGKCFCTT--KGVKGDE 1124
Score = 52 (23.4 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD 34
+C+C G+ C+ C + G VTD
Sbjct: 105 QCVCPAGWVGEQCQHCGGRFRLTGSSGFVTD 135
Score = 51 (23.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDC-KQCPCPNQGPCVQLDD 51
C +++ CE C + G A + V C C P++G C DD
Sbjct: 248 CKSSNSSNTVQCE-CLENWKGEACD--VPHCVHDCGFPDRGVCNSSDD 292
Score = 44 (20.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 4 RCICQDNTGGDNCE--RCAR--GYYGNALEGAVTDCKQCPC-PN-QGP 45
+C C +N G+ C+ C G+ + + +D + C C P QGP
Sbjct: 258 QCECLENWKGEACDVPHCVHDCGFPDRGVCNS-SDDRGCSCFPEWQGP 304
>ZFIN|ZDB-GENE-081028-60 [details] [associations]
symbol:atrnl1a "attractin-like 1a" species:7955
"Danio rerio" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR016201 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-081028-60
GO:GO:0016021 GO:GO:0007275 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 SUPFAM:SSF103575 EMBL:AL954359
EMBL:CABZ01039684 EMBL:CABZ01039685 EMBL:CABZ01039686
EMBL:CABZ01039687 EMBL:CABZ01039688 EMBL:CABZ01039689
EMBL:CABZ01039690 EMBL:CABZ01039691 EMBL:CABZ01039692
EMBL:CABZ01039693 EMBL:CABZ01039694 EMBL:CABZ01039695
EMBL:CABZ01039696 EMBL:CR762487 EMBL:CT573136 IPI:IPI00836296
Ensembl:ENSDART00000089533 ArrayExpress:F1Q4X2 Bgee:F1Q4X2
Uniprot:F1Q4X2
Length = 1400
Score = 151 (58.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/74 (41%), Positives = 40/74 (54%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H Q L GY+ +PT+GG +C C CN HA++C + SG+C C GD C+
Sbjct: 1056 LTAGLHCQFCLPGYYGDPTNGG---KCQACRCNNHANVCHSSSGKCYCTTKGVKGDQCQL 1112
Query: 136 C--ARGYYGNALEG 147
C Y GN L G
Sbjct: 1113 CDSENRYLGNPLRG 1126
Score = 136 (52.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 46/168 (27%), Positives = 68/168 (40%)
Query: 24 YGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNLGNRTRIRIKSALGGNRTRG--LALT 80
YG LE DC C C Q L+ G+ T + G+ RG +L+
Sbjct: 949 YGQCLEWQTGDCGAQNCSGHRTCGQCLEQPDCGWCGDPTDTGQGQCIEGSY-RGPMRSLS 1007
Query: 81 RQTHYQL--TGY-HHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERC 136
RQ+ ++ T E A+ C C CNGH+ C C C++ T G +C+ C
Sbjct: 1008 RQSRERVLDTSVCSREKGFDWAYITCPACQCNGHST-C-VNGSVCEQCKNLTAGLHCQFC 1065
Query: 137 ARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
GYYG+ G C+ C C N + C+ +G G++
Sbjct: 1066 LPGYYGDPTNGG--KCQACRCNNHANVCHSSSGKCYCTT--KGVKGDQ 1109
Score = 59 (25.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C+ GD C+ C + G++TD
Sbjct: 59 CVCEQGWTGDQCQHCQGRFKLTESSGSLTD 88
Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 249 CVCNDSWQGPDC 260
>FB|FBgn0031981 [details] [associations]
symbol:CG7466 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
EMBL:AE014134 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR009030 SUPFAM:SSF57184
HSSP:P35555 Pfam:PF12661 InterPro:IPR011043 SUPFAM:SSF50965
OMA:GHSMVFH FlyBase:FBgn0031981 RefSeq:NP_609180.2 UniGene:Dm.2153
ProteinModelPortal:Q9VLT6 SMR:Q9VLT6 MINT:MINT-1329221
EnsemblMetazoa:FBtr0079541 GeneID:34099 KEGG:dme:Dmel_CG7466
UCSC:CG7466-RA InParanoid:Q9VLT6 PhylomeDB:Q9VLT6 GenomeRNAi:34099
NextBio:786863 ArrayExpress:Q9VLT6 Bgee:Q9VLT6 Uniprot:Q9VLT6
Length = 2898
Score = 160 (61.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 51/165 (30%), Positives = 69/165 (41%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CPNQGP-CVQLDDDQVSNLGNR 60
C+ C +NT G+ CE+C + GN EG C+ C C CV D D + N
Sbjct: 2322 CLKCHNNTMGEQCEKCQPLFVGNPREGHA--CQPCLDYCHGHSDVCVAYDADPA--VFNM 2377
Query: 61 TRIRIKSALG-GNRTRGLALTRQTHYQ-------LTGYHHEPTSGGAFSRCVPCNCNGHA 112
TR ++ L G L H LTGY S C PC C+GH
Sbjct: 2378 TRSELERILQEGPAYNATCLRCGNHTAGDRCDSCLTGYFRG--SEDLHKECRPCQCHGHG 2435
Query: 113 DICDAESG-RCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQC 155
+ICD +G +C C +NT D C G N+ + + C +C
Sbjct: 2436 NICDPVTGEKCNCANNTESD--ATCTAGGGKNSAQLCWMVQCSKC 2478
Score = 153 (58.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 103 CVPCNCNGHAD----ICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
C+PC CNGH + +C+ +G C C+DNT G NCE CA GYYG+ G
Sbjct: 1308 CLPCECNGHGNQDLGVCNVSNGECYCKDNTQGLNCELCAPGYYGDPRGG 1356
Score = 139 (54.0 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 33/89 (37%), Positives = 45/89 (50%)
Query: 106 CNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP---NQ- 160
C CN H+ C+ G+C CQD + G+ CERC +G YGNA A C C C NQ
Sbjct: 1264 CGCNNHST-CNERLGKCDQCQDWSEGEKCERCRQGSYGNAT--APHGCLPCECNGHGNQD 1320
Query: 161 -GPCVQLDDDQVVCSECPRGYGGEKMSPG 188
G C + + + C + +G E +PG
Sbjct: 1321 LGVC-NVSNGECYCKDNTQGLNCELCAPG 1348
Score = 94 (38.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/98 (31%), Positives = 41/98 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQD + G+ CERC +G YGNA A C C C G D V N+ N
Sbjct: 1282 CQDWSEGEKCERCRQGSYGNAT--APHGCLPCECNGHGN----QDLGVCNVSNG------ 1329
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGG-AFSRC 103
+ T+GL GY+ +P GG + +C
Sbjct: 1330 ECYCKDNTQGL----NCELCAPGYYGDPRGGGKCYYQC 1363
Score = 92 (37.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 16/26 (61%), Positives = 18/26 (69%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEG 30
C C+DNT G NCE CA GYYG+ G
Sbjct: 1331 CYCKDNTQGLNCELCAPGYYGDPRGG 1356
Score = 89 (36.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 35/105 (33%), Positives = 46/105 (43%)
Query: 83 THYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYG 142
TH + +H+ A + C+ NGH + CD S +CI D G C CA+GY
Sbjct: 2215 THADVVSWHYVQCP--AENECI----NGHHN-CDTVSEQCIDLDTAVGYKCV-CAQGYRE 2266
Query: 143 NALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186
+GA C Q C +G CV D C +C GY G S
Sbjct: 2267 E--QGACLPVCSQ-GCV-RGNCVSPDQ----C-QCDFGYVGANCS 2302
Score = 87 (35.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 117 AESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDDDQVVCS 174
A + C+ C ++T GD C+ C GY+ + E +C+ C C G C + ++ C+
Sbjct: 2391 AYNATCLRCGNHTAGDRCDSCLTGYFRGS-EDLHKECRPCQCHGHGNICDPVTGEKCNCA 2449
Score = 74 (31.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 105 PCNCNGHA--DICDAESGRCICQD-NTGGDNC 133
P NCN CD E GRCIC + N G +C
Sbjct: 1527 PSNCNAKRMQGFCDTEYGRCICSNANYAGADC 1558
Score = 63 (27.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G NC C RGY G+ V C + C N G C
Sbjct: 1205 CTNTQGSYNCH-CRRGYIGDGKFSCVRTCYEL-CQN-GNC 1241
Score = 46 (21.3 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 37 QCP--CPNQGPCVQ--LDDDQVS-NLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGY 90
+CP CP+ G C + Q + GN+ + S LG N + H++ Y
Sbjct: 700 RCPGICPSLGDCHSCLVHGSQWGKSSGNKAAFSVASKLGLNECTWCVQNAKCHHRDDNY 758
Score = 42 (19.8 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 7 CQDNTGGDNCER----CARGYYG 25
C ++ G C++ C+RGY G
Sbjct: 185 CGESQGRGRCQKSICHCSRGYSG 207
Score = 41 (19.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 83 THYQLTGYHHEPTSGGAFSRCVPC--NCNGHADICDAE 118
TH ++ H G RCVP +C + C+ E
Sbjct: 1996 THQEVAPVCHWCDDCGIRGRCVPAGVDCGRRSAWCNKE 2033
Score = 38 (18.4 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 7 CQDNTGGDNCERCAR 21
C + T +CE CAR
Sbjct: 1005 CSNCTNYVSCEACAR 1019
Score = 36 (17.7 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 4 RCICQDNTGGDNCE 17
+C+C G +CE
Sbjct: 164 QCVCHGEWVGPDCE 177
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 180 (68.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/163 (27%), Positives = 67/163 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNA----LEGA-VTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
C+CQ NT G NC+RCA +Y N EG + +C++C C D V
Sbjct: 279 CVCQHNTAGPNCDRCAP-FYNNRPWRPAEGQDIHECQRCDCNGHSETCHFDP-AVFAASQ 336
Query: 60 RTRIRIKSALGGNRTRGLALTR-QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
T + + T G R Q HY + + C+PC C+ +
Sbjct: 337 GTSGGVCDNCQ-DHTEGKNCERCQLHY----FRNRRPGAPIHETCIPCECDPDGAVPGAP 391
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
CD +G+C+C+D+ G+ C+ C G+ G C C C
Sbjct: 392 CDRLTGQCVCKDHVQGERCDLCKPGFTGLTFANP-QGCHPCDC 433
Score = 129 (50.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 42/140 (30%), Positives = 58/140 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+C N G C++CA ++ A G C+ C C P L Q + +
Sbjct: 450 RCLCLPNVVGPKCDQCAPSHWKLA-SGR--GCEPCACD---PRNSLSS-QCNQFTGQCPC 502
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G-HADICDAESG 120
R GG T A RQ + T G + C C+C+ G CD SG
Sbjct: 503 R--EGFGG-LTCSSAAIRQCP--------DRTHGDVATGCRACDCDFRGTEGPGCDKTSG 551
Query: 121 RCICQDNTGGDNCERCARGY 140
RC+C+ G C++C RGY
Sbjct: 552 RCLCRPGLTGPRCDQCQRGY 571
Score = 121 (47.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 103 CVPCNCN--G-HADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC- 157
C PC+C+ G D+ C+ E+GRC+C N G C++CA ++ A G C+ C C
Sbjct: 428 CHPCDCSILGTRQDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLA-SGR--GCEPCACD 484
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
P Q + C C G+GG S A
Sbjct: 485 PRNSLSSQCNQFTGQCP-CREGFGGLTCSSAA 515
>MGI|MGI:99913 [details] [associations]
symbol:Lamc2 "laminin, gamma 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISO] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005607 "laminin-2 complex" evidence=ISO]
[GO:0005610 "laminin-5 complex" evidence=IDA] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] MGI:MGI:99913 GO:GO:0008201 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 HOGENOM:HOG000019301 GO:GO:0005610
eggNOG:NOG285700 HOVERGEN:HBG062127 OrthoDB:EOG4ZCT3N EMBL:U43327
IPI:IPI00117115 UniGene:Mm.329272 ProteinModelPortal:Q61092
SMR:Q61092 STRING:Q61092 PhosphoSite:Q61092 PRIDE:Q61092
UCSC:uc007czr.1 InParanoid:Q61092 PMAP-CutDB:Q61092
CleanEx:MM_LAMC2 Genevestigator:Q61092
GermOnline:ENSMUSG00000026479 Uniprot:Q61092
Length = 1191
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 35/98 (35%), Positives = 47/98 (47%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+GY + G F CVPCNC G CD ++G C D C C G+Y + +
Sbjct: 398 SGYKRDSARLGPFGACVPCNCQG-GGACDPDTGDCYSGDENPDIECADCPIGFYNDPHDP 456
Query: 148 AVTDCKQCPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
CK CPC N C V + ++VVC+ CP G G +
Sbjct: 457 R--SCKPCPCHNGFSCSVMPETEEVVCNNCPPGVTGAR 492
Score = 167 (63.8 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 50/156 (32%), Positives = 70/156 (44%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
RC+ C DNT G +CERC G+Y + C C C ++G L + N +
Sbjct: 52 RCLNCNDNTAGVHCERCREGFYRHRDRDR---CLPCNCHSKG---SLS----AGCDNSGQ 101
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC 122
R K + G R + + LT G S+C C+ G + CD SGRC
Sbjct: 102 CRCKPGVTGQRCDRC---QPGFHMLTDAGCTRDQGQLDSKC-DCDPAGISGPCD--SGRC 155
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC 157
+C+ G+ C+RC GYY L+ A + C QC C
Sbjct: 156 VCKPAVTGERCDRCRPGYYH--LDRANPEGCTQCFC 189
Score = 133 (51.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 36/104 (34%), Positives = 47/104 (45%)
Query: 89 GYHHEPTSG-GAFSRCVPCNCNGHADI-----CDAESGRCI-CQDNTGGDNCERCARGYY 141
G+ +P G C C CN + D CD +GRC+ C NT G C++C GY+
Sbjct: 499 GFFGDPFGERGPVRPCQRCQCNNNVDPNASGNCDQLTGRCLKCIYNTAGVYCDQCKAGYF 558
Query: 142 GNALEGAVTD-CKQCPCPNQG--PCVQLDDDQVVCSECPRGYGG 182
G+ L D C+ C C G P D VC P G+GG
Sbjct: 559 GDPLAPNPADKCRACNCSPMGSEPGECRGDGSCVCK--P-GFGG 599
Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 32/97 (32%), Positives = 43/97 (44%)
Query: 102 RCVPCNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQ---- 154
RC+PCNC+ + CD SG+C C+ G C+RC G++ G D Q
Sbjct: 80 RCLPCNCHSKGSLSAGCD-NSGQCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQLDSK 138
Query: 155 CPC-PN--QGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
C C P GPC D + VC G ++ PG
Sbjct: 139 CDCDPAGISGPC---DSGRCVCKPAVTGERCDRCRPG 172
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/136 (26%), Positives = 54/136 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNAL--EGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C G CE CA G++G+ G V C++C C N +D + N T
Sbjct: 484 CPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNN-----VDPNASGNCDQLTGRC 538
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN---GHADICDAESGR 121
+K T G+ + GY +P + +C CNC+ C + G
Sbjct: 539 LKCIYN---TAGVYCDQCK----AGYFGDPLAPNPADKCRACNCSPMGSEPGECRGD-GS 590
Query: 122 CICQDNTGGDNCERCA 137
C+C+ GG NC+ A
Sbjct: 591 CVCKPGFGGLNCDHAA 606
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 34/96 (35%), Positives = 45/96 (46%)
Query: 99 AFSRCVPCNCNGHADIC--DAE------SG-RCI-CQDNTGGDNCERCARGYYGNALEGA 148
A SR C+CNG + C D E SG RC+ C DNT G +CERC G+Y +
Sbjct: 21 ATSRREVCDCNGKSRQCVFDQELHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHRDRDR 80
Query: 149 VTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C C C ++G D+ C C G G++
Sbjct: 81 ---CLPCNCHSKGSLSAGCDNSGQC-RCKPGVTGQR 112
Score = 106 (42.4 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 89 GYHHEPTSGGAFSRCVPCNC-NGHADICDAESGRCICQD---NTGGDNCERCARGYYGNA 144
G++++P + C PC C NG + E+ +C + G CE CA G++G+
Sbjct: 448 GFYNDPHDPRS---CKPCPCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGFFGDP 504
Query: 145 L--EGAVTDCKQCPCPNQ-GPCVQLDDDQVV--CSEC 176
G V C++C C N P + DQ+ C +C
Sbjct: 505 FGERGPVRPCQRCQCNNNVDPNASGNCDQLTGRCLKC 541
Score = 101 (40.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 121 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC-------PNQGPCVQLDDD-QV 171
RC+C G C+ CA GY ++ G C C C P+ G C D++ +
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGACVPCNCQGGGACDPDTGDCYSGDENPDI 440
Query: 172 VCSECPRGYGGEKMSP 187
C++CP G+ + P
Sbjct: 441 ECADCPIGFYNDPHDP 456
Score = 79 (32.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPC 46
RC+C G C+ CA GY ++ G C C C G C
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGACVPCNCQGGGAC 424
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 28/116 (24%), Positives = 40/116 (34%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G C+RC G++ G D Q C D +S + R
Sbjct: 101 QCRCKPGVTGQRCDRCQPGFHMLTDAGCTRDQGQL----DSKC-DCDPAGISGPCDSGRC 155
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
K A+ G R GY+H + C C C GH+ C A +
Sbjct: 156 VCKPAVTGERCDRCR---------PGYYHLDRANP--EGCTQCFCYGHSASCHASA 200
Score = 63 (27.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQV 54
C D C C G+Y + + CK CPC N C V + ++V
Sbjct: 431 CYSGDENPDIECADCPIGFYNDPHDPR--SCKPCPCHNGFSCSVMPETEEV 479
>UNIPROTKB|F1LRH4 [details] [associations]
symbol:Lamc2 "Protein Lamc2" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] RGD:621053
GO:GO:0008201 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610 CTD:3918
KO:K06246 OMA:DRCLPCN IPI:IPI00393413 RefSeq:NP_001094110.1
UniGene:Rn.9278 ProteinModelPortal:F1LRH4
Ensembl:ENSRNOT00000036947 GeneID:192362 KEGG:rno:192362
NextBio:623057 ArrayExpress:F1LRH4 Uniprot:F1LRH4
Length = 1192
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 35/98 (35%), Positives = 47/98 (47%)
Query: 88 TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+GY + G F CVPCNC G CD ++G C D C C G+Y + +
Sbjct: 398 SGYKRDSARLGPFGTCVPCNCQG-GGACDPDTGDCYSGDENPDIECADCPIGFYNDPHDP 456
Query: 148 AVTDCKQCPCPNQGPC-VQLDDDQVVCSECPRGYGGEK 184
CK CPC N C V + ++VVC+ CP G G +
Sbjct: 457 R--SCKPCPCHNGFSCSVMPETEEVVCNNCPPGVTGAR 492
Score = 157 (60.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 49/156 (31%), Positives = 68/156 (43%)
Query: 4 RCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
RC+ C DNT G +CERC G+Y C C C ++G L + N +
Sbjct: 52 RCLNCNDNTAGVHCERCREGFYRQRDRDR---CLPCNCHSKG---SLG----AGCDNSGQ 101
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC 122
R K + G R + + LT S+C C+ G + CD SGRC
Sbjct: 102 CRCKPGVVGQRCDRC---QPGFHMLTDAGCTRDQRQLDSKC-DCDPAGISGPCD--SGRC 155
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPC 157
+C+ G+ C+RC GYY L+ A + C QC C
Sbjct: 156 VCKPAVTGERCDRCRAGYYH--LDRANPEGCTQCFC 189
Score = 131 (51.2 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 36/104 (34%), Positives = 47/104 (45%)
Query: 89 GYHHEPTSG-GAFSRCVPCNCNGHADI-----CDAESGRCI-CQDNTGGDNCERCARGYY 141
G+ +P G C C CN + D CD +GRC+ C NT G C++C GY+
Sbjct: 499 GFFGDPFGERGPVRPCQRCQCNNNVDPSASGNCDQLTGRCLKCIYNTAGIYCDQCKAGYF 558
Query: 142 GNALEGAVTD-CKQCPCPNQG--PCVQLDDDQVVCSECPRGYGG 182
G+ L D C+ C C G P D VC P G+GG
Sbjct: 559 GDPLAPNPADKCRACNCNPVGSEPGECRSDGSCVCK--P-GFGG 599
Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 37/136 (27%), Positives = 53/136 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNAL--EGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C G CE CA G++G+ G V C++C C N +D N T
Sbjct: 484 CPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNN-----VDPSASGNCDQLTGRC 538
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN---GHADICDAESGR 121
+K T G+ + GY +P + +C CNCN C ++ G
Sbjct: 539 LKCIYN---TAGIYCDQCK----AGYFGDPLAPNPADKCRACNCNPVGSEPGECRSD-GS 590
Query: 122 CICQDNTGGDNCERCA 137
C+C+ GG NC A
Sbjct: 591 CVCKPGFGGLNCAHAA 606
Score = 108 (43.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 28/97 (28%), Positives = 45/97 (46%)
Query: 89 GYHHEPTSGGAFSRCVPCNC-NGHADICDAESGRCICQD---NTGGDNCERCARGYYGNA 144
G++++P + C PC C NG + E+ +C + G CE CA G++G+
Sbjct: 448 GFYNDPHDPRS---CKPCPCHNGFSCSVMPETEEVVCNNCPPGVTGARCELCADGFFGDP 504
Query: 145 L--EGAVTDCKQCPCPNQ-GPCVQLDDDQVV--CSEC 176
G V C++C C N P + DQ+ C +C
Sbjct: 505 FGERGPVRPCQRCQCNNNVDPSASGNCDQLTGRCLKC 541
Score = 102 (41.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 121 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPC-------PNQGPCVQLDDD-QV 171
RC+C G C+ CA GY ++ G C C C P+ G C D++ +
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGTCVPCNCQGGGACDPDTGDCYSGDENPDI 440
Query: 172 VCSECPRGYGGEKMSP 187
C++CP G+ + P
Sbjct: 441 ECADCPIGFYNDPHDP 456
Score = 80 (33.2 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPC 46
RC+C G C+ CA GY ++ G C C C G C
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGTCVPCNCQGGGAC 424
Score = 77 (32.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 28/112 (25%), Positives = 40/112 (35%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G C+RC G++ G D +Q C D +S + R
Sbjct: 101 QCRCKPGVVGQRCDRCQPGFHMLTDAGCTRDQRQL----DSKC-DCDPAGISGPCDSGRC 155
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC 115
K A+ G R GY+H + C C C GH+D C
Sbjct: 156 VCKPAVTGERCDRCR---------AGYYHLDRANP--EGCTQCFCYGHSDSC 196
Score = 63 (27.2 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC-VQLDDDQV 54
C D C C G+Y + + CK CPC N C V + ++V
Sbjct: 431 CYSGDENPDIECADCPIGFYNDPHDPR--SCKPCPCHNGFSCSVMPETEEV 479
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 179 (68.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 46/163 (28%), Positives = 67/163 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGNA----LEGAVT-DCKQCPCPNQGPCVQLDDDQVSNLGN 59
C+CQ NT G NC+RCA +Y N EG T +C++C C D V
Sbjct: 276 CVCQHNTAGPNCDRCAP-FYNNRPWRPAEGQDTHECQRCDCNGHSETCHFDP-AVFAASQ 333
Query: 60 RTRIRIKSALGGNRTRGLALTR-QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---- 114
T + + T G R Q HY + + S C+PC C+ +
Sbjct: 334 GTNGGVCDNCR-DHTEGKNCERCQLHY----FRNRRPSAPIHETCIPCECDPDGAVQGAP 388
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
CD +G+C+C++ G+ C+ C G+ G C C C
Sbjct: 389 CDRLTGQCVCKEYVQGERCDLCKPGFTGLTFANP-KGCHACDC 430
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 42/138 (30%), Positives = 56/138 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+C N G C++CA ++ A G C+ C C P L Q + +
Sbjct: 447 RCLCLPNVVGPKCDQCAPSHWKLA-SGL--GCEPCACD---PRNSLSS-QCNQFTGQCPC 499
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADICDAESGRC 122
R GG T A RQ Q Y H T R C+ G CD SGRC
Sbjct: 500 R--EGFGG-LTCSSAAIRQCPDQT--YGHVATG----CRACDCDFRGTEGPGCDKASGRC 550
Query: 123 ICQDNTGGDNCERCARGY 140
+C+ G C++C RG+
Sbjct: 551 LCRPGFTGPRCDQCQRGH 568
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 30/89 (33%), Positives = 38/89 (42%)
Query: 106 CNCNGHADICDAESGR----------CICQDNTGGDNCERCARGYYGNA----LEGAVT- 150
C C+GHAD C G C+CQ NT G NC+RCA +Y N EG T
Sbjct: 250 CFCHGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAP-FYNNRPWRPAEGQDTH 308
Query: 151 DCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
+C++C C D S+ G
Sbjct: 309 ECQRCDCNGHSETCHFDPAVFAASQGTNG 337
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 103 CVPCNCN---GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC- 157
C C+C+ D+ C+ E+GRC+C N G C++CA ++ A G C+ C C
Sbjct: 425 CHACDCSILGARKDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLA-SGL--GCEPCACD 481
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
P Q + C C G+GG S A
Sbjct: 482 PRNSLSSQCNQFTGQCP-CREGFGGLTCSSAA 512
>ZFIN|ZDB-GENE-090312-21 [details] [associations]
symbol:atrn "attractin" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-090312-21
GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CR388098 EMBL:CR589874
EMBL:CT583702 IPI:IPI00806015 ProteinModelPortal:F1Q5V0
Ensembl:ENSDART00000089528 ArrayExpress:F1Q5V0 Bgee:F1Q5V0
Uniprot:F1Q5V0
Length = 1383
Score = 158 (60.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 73 RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGD 131
R L +Q ++GY+ +PT+GG+ C PC CNGHA +C++ +G+C C GD
Sbjct: 1033 RCEDLTTGKQCESCISGYYGDPTNGGS---CQPCKCNGHASMCNSNNGKCFCTTKGIKGD 1089
Query: 132 NCERCA--RGYYGNALEG 147
C C Y GN L+G
Sbjct: 1090 RCHVCEVENRYQGNPLKG 1107
Score = 136 (52.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/86 (32%), Positives = 41/86 (47%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F +C C CNGH+ C ES C+D T G CE C GYYG+ G C+ C C
Sbjct: 1010 SFIQCPACQCNGHSS-CVNESVCERCEDLTTGKQCESCISGYYGDPTNGG--SCQPCKCN 1066
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
++ + C+ +G G++
Sbjct: 1067 GHASMCNSNNGKCFCTT--KGIKGDR 1090
Score = 48 (22.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 4 RCICQDNTGGDNCE--RCARGYYGNALEGAV-TDCKQCPC 40
+C+C+D G+ C+ C+ G L G K+C C
Sbjct: 221 QCVCEDGWKGEACDVPYCSSDC-GFPLRGQCHNSTKRCLC 259
Score = 47 (21.6 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C+ G+ C+ C + G ++D
Sbjct: 69 CVCETGWVGEQCQHCGGRFRLTGPSGYLSD 98
Score = 35 (17.4 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 3 RRCICQDNTGGDNC 16
+RC+C+ G +C
Sbjct: 255 KRCLCKPGWQGLDC 268
>UNIPROTKB|F1P236 [details] [associations]
symbol:F1P236 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0002437 "inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0003184
"pulmonary valve morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0016049 "cell growth"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005634 GO:GO:0008285 GO:GO:0009986 GO:GO:0030154
GO:GO:0005887 GO:GO:0002437 GO:GO:0016049 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 PROSITE:PS01186 PROSITE:PS00010
GO:GO:0006959 GO:GO:0050793 GO:GO:0046579 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 EMBL:AADN02033880
EMBL:AADN02033881 EMBL:AADN02033882 IPI:IPI00822103
Ensembl:ENSGALT00000039988 ArrayExpress:F1P236 Uniprot:F1P236
Length = 2442
Score = 161 (61.7 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 59/197 (29%), Positives = 82/197 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C+D+ GG CE C GY G E V +C+ PC N G C+ L + + G R R+
Sbjct: 1139 CRDHLGGYQCE-CVPGYQGVNCEYEVDECQFQPCQNGGTCIDLVNHFRCSCPPGTRGRLC 1197
Query: 64 --RIKSAL---GGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGH 111
+ + GG R G + + Y L G+ E G + C+ PCN G
Sbjct: 1198 EENVDDCISESGGPRCFNGGQCIDQIGGYSCLCLPGFAGERCEGD-INECLSNPCNPRGS 1256
Query: 112 ADICDAESG-RCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDD- 168
D + CIC+ G +CE +V D C + PC N G C +
Sbjct: 1257 LDCIQLINDYTCICRSAFTGRHCE-------------SVIDVCPRKPCQNGGTCAVASNM 1303
Query: 169 -DQVVCSECPRGYGGEK 184
D +C +CP GY G K
Sbjct: 1304 PDGFIC-QCPPGYSGAK 1319
Score = 154 (59.3 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 58/193 (30%), Positives = 78/193 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D+ G C C GY G + + C + PC N+G C Q G +TR
Sbjct: 1015 CVDSLGKYRCI-CPLGYTGKNCQTPMDLCSKSPCKNKGTCFQS--------GAQTRCDCP 1065
Query: 67 SALGG------NRTRGLALTRQ--THYQLTGYHHEPTSGGAFSRCVPCN-------CNGH 111
S G N + +A +++ T QL + + G RC C C
Sbjct: 1066 SGWTGAYCDVPNVSCQVAASQRGITVDQLCQHSGHCLNVGNTHRC-QCRVGYTGSYCEEQ 1124
Query: 112 ADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
D CD+ C+D+ GG CE C GY G E V +C+ PC N G C+ L +
Sbjct: 1125 LDECDSSPCQNGATCRDHLGGYQCE-CVPGYQGVNCEYEVDECQFQPCQNGGTCIDLVN- 1182
Query: 170 QVVCSECPRGYGG 182
CS CP G G
Sbjct: 1183 HFRCS-CPPGTRG 1194
Score = 121 (47.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 49/187 (26%), Positives = 70/187 (37%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNL----GNR 60
+C + G CE C G+ G + + DC PC N CV ++ L G++
Sbjct: 862 LCHNIQGSYLCE-CRPGFTGGDCDSNIDDCLSNPCQNGASCVDGINSFSCICLPGFHGDK 920
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES- 119
+ L G T HY + Y + G F NC + D C S
Sbjct: 921 CQTDTNECLSEPCRNGGTCT---HY-VNSYTCKCQPG--FEGT---NCENNIDECTESSC 971
Query: 120 ---GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
G C+ D C+ C G+ G + +C PC N+G CV + C C
Sbjct: 972 FNGGTCV--DGINSFTCQ-CPVGFTGPFCLMEINECDSHPCLNKGSCVD-SLGKYRCI-C 1026
Query: 177 PRGYGGE 183
P GY G+
Sbjct: 1027 PLGYTGK 1033
Score = 117 (46.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 47/179 (26%), Positives = 66/179 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ--VSNLGNRTRIR 64
C D+ G C+ CA G+ G E + +C PC + G C D + N G I
Sbjct: 523 CIDHPNGYECQ-CATGFTGVLCEENINNCDPDPC-HHGECQDGIDSYTCICNPGYMGAIC 580
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI- 123
+ + L R + GY G + NC + D C S C+
Sbjct: 581 SEQINECHSNPCLHQGRCIDL-VNGYQCNCLPGTS-----GVNCENNFDDC--ASNPCVH 632
Query: 124 --CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D NC C G+ G + +C PC N G C+ + + C CP GY
Sbjct: 633 GDCIDGINRYNCA-CKPGFTGPRCNVDIDECASSPCNNGGTCIN-EVNGFRCV-CPEGY 688
Score = 115 (45.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 48/188 (25%), Positives = 72/188 (38%)
Query: 6 ICQDN--TGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
ICQ++ + G C+ CA G+ G + +C PC N C + Q S L
Sbjct: 822 ICQESPDSEGYTCQ-CAPGWEGERCTVDIDECLSKPCKNHALCHNI---QGSYL---CEC 874
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCNGHADICDAESGRC 122
R GG+ + Q G G +FS C+ C H D C ++ C
Sbjct: 875 R-PGFTGGDCDSNIDDCLSNPCQ-NGA--SCVDGINSFS-CI-CLPGFHGDKCQTDTNEC 928
Query: 123 ICQDNTGGDNCE--------RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
+ + G C +C G+ G E + +C + C N G CV + C
Sbjct: 929 LSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENNIDECTESSCFNGGTCVD-GINSFTC- 986
Query: 175 ECPRGYGG 182
+CP G+ G
Sbjct: 987 QCPVGFTG 994
Score = 97 (39.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G RC + N C H++ C ++ C D GG C G+ G E
Sbjct: 415 FHCECLKGYTGPRCEMDINEC--HSNPCQNDA---TCLDKIGGFTCLCMPVGFKGVHCEE 469
Query: 148 AVTDCKQCPCPNQGPCVQLDD-DQVVCSECPRGYGG 182
+ +C PC N G C LD ++ +C CP G+ G
Sbjct: 470 DIDECLSNPCVNNGEC--LDKVNRFLCV-CPPGFSG 502
Score = 91 (37.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 27/98 (27%), Positives = 40/98 (40%)
Query: 94 PTSGGAFSRCVPC----NCNGHADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEG 147
P S G +C P C D C ++ +C + G CE C G+ G +
Sbjct: 827 PDSEGYTCQCAPGWEGERCTVDIDECLSKPCKNHALCHNIQGSYLCE-CRPGFTGGDCDS 885
Query: 148 AVTDCKQCPCPNQGPCVQ-LDDDQVVCSECPRGYGGEK 184
+ DC PC N CV ++ +C P G+ G+K
Sbjct: 886 NIDDCLSNPCQNGASCVDGINSFSCIC--LP-GFHGDK 920
Score = 89 (36.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G E + +C PC + G C Q
Sbjct: 508 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGVLCEENINNCDPDPC-HHGEC-QDGI 564
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 565 DSYTCI-CNPGYMG 577
Score = 77 (32.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C GY G+ E C PC N G C Q D
Sbjct: 173 CINLPGSFRCQ-CKPGYTGHRCESNYVPCSPSPCMNGGTCHQTSD 216
Score = 49 (22.3 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 4 RCICQDNTGGDNCERCARG 22
RC C+ G+N ER A G
Sbjct: 756 RCTCRKGFKGENSERIATG 774
Score = 43 (20.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 5 CICQDNTGGDNCE 17
CICQ G CE
Sbjct: 143 CICQSGYTGQKCE 155
>UNIPROTKB|F1N9V3 [details] [associations]
symbol:F1N9V3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0002437 "inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0003184
"pulmonary valve morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0016049 "cell growth"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005634 GO:GO:0008285 GO:GO:0009986 GO:GO:0030154
GO:GO:0005887 GO:GO:0002437 GO:GO:0016049 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 PROSITE:PS01186 PROSITE:PS00010
GO:GO:0006959 GO:GO:0050793 GO:GO:0046579 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:AADN02033880 EMBL:AADN02033881 EMBL:AADN02033882
IPI:IPI00812690 Ensembl:ENSGALT00000004611 ArrayExpress:F1N9V3
Uniprot:F1N9V3
Length = 2467
Score = 161 (61.7 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 59/197 (29%), Positives = 82/197 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C+D+ GG CE C GY G E V +C+ PC N G C+ L + + G R R+
Sbjct: 1164 CRDHLGGYQCE-CVPGYQGVNCEYEVDECQFQPCQNGGTCIDLVNHFRCSCPPGTRGRLC 1222
Query: 64 --RIKSAL---GGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGH 111
+ + GG R G + + Y L G+ E G + C+ PCN G
Sbjct: 1223 EENVDDCISESGGPRCFNGGQCIDQIGGYSCLCLPGFAGERCEGD-INECLSNPCNPRGS 1281
Query: 112 ADICDAESG-RCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDD- 168
D + CIC+ G +CE +V D C + PC N G C +
Sbjct: 1282 LDCIQLINDYTCICRSAFTGRHCE-------------SVIDVCPRKPCQNGGTCAVASNM 1328
Query: 169 -DQVVCSECPRGYGGEK 184
D +C +CP GY G K
Sbjct: 1329 PDGFIC-QCPPGYSGAK 1344
Score = 154 (59.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 58/193 (30%), Positives = 78/193 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D+ G C C GY G + + C + PC N+G C Q G +TR
Sbjct: 1040 CVDSLGKYRCI-CPLGYTGKNCQTPMDLCSKSPCKNKGTCFQS--------GAQTRCDCP 1090
Query: 67 SALGG------NRTRGLALTRQ--THYQLTGYHHEPTSGGAFSRCVPCN-------CNGH 111
S G N + +A +++ T QL + + G RC C C
Sbjct: 1091 SGWTGAYCDVPNVSCQVAASQRGITVDQLCQHSGHCLNVGNTHRC-QCRVGYTGSYCEEQ 1149
Query: 112 ADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
D CD+ C+D+ GG CE C GY G E V +C+ PC N G C+ L +
Sbjct: 1150 LDECDSSPCQNGATCRDHLGGYQCE-CVPGYQGVNCEYEVDECQFQPCQNGGTCIDLVN- 1207
Query: 170 QVVCSECPRGYGG 182
CS CP G G
Sbjct: 1208 HFRCS-CPPGTRG 1219
Score = 121 (47.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 49/187 (26%), Positives = 70/187 (37%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNL----GNR 60
+C + G CE C G+ G + + DC PC N CV ++ L G++
Sbjct: 887 LCHNIQGSYLCE-CRPGFTGGDCDSNIDDCLSNPCQNGASCVDGINSFSCICLPGFHGDK 945
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES- 119
+ L G T HY + Y + G F NC + D C S
Sbjct: 946 CQTDTNECLSEPCRNGGTCT---HY-VNSYTCKCQPG--FEGT---NCENNIDECTESSC 996
Query: 120 ---GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
G C+ D C+ C G+ G + +C PC N+G CV + C C
Sbjct: 997 FNGGTCV--DGINSFTCQ-CPVGFTGPFCLMEINECDSHPCLNKGSCVD-SLGKYRCI-C 1051
Query: 177 PRGYGGE 183
P GY G+
Sbjct: 1052 PLGYTGK 1058
Score = 117 (46.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 47/179 (26%), Positives = 66/179 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ--VSNLGNRTRIR 64
C D+ G C+ CA G+ G E + +C PC + G C D + N G I
Sbjct: 548 CIDHPNGYECQ-CATGFTGVLCEENINNCDPDPC-HHGECQDGIDSYTCICNPGYMGAIC 605
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI- 123
+ + L R + GY G + NC + D C S C+
Sbjct: 606 SEQINECHSNPCLHQGRCIDL-VNGYQCNCLPGTS-----GVNCENNFDDC--ASNPCVH 657
Query: 124 --CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D NC C G+ G + +C PC N G C+ + + C CP GY
Sbjct: 658 GDCIDGINRYNCA-CKPGFTGPRCNVDIDECASSPCNNGGTCIN-EVNGFRCV-CPEGY 713
Score = 115 (45.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 48/188 (25%), Positives = 72/188 (38%)
Query: 6 ICQDN--TGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
ICQ++ + G C+ CA G+ G + +C PC N C + Q S L
Sbjct: 847 ICQESPDSEGYTCQ-CAPGWEGERCTVDIDECLSKPCKNHALCHNI---QGSYL---CEC 899
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCNGHADICDAESGRC 122
R GG+ + Q G G +FS C+ C H D C ++ C
Sbjct: 900 R-PGFTGGDCDSNIDDCLSNPCQ-NGA--SCVDGINSFS-CI-CLPGFHGDKCQTDTNEC 953
Query: 123 ICQDNTGGDNCE--------RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
+ + G C +C G+ G E + +C + C N G CV + C
Sbjct: 954 LSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENNIDECTESSCFNGGTCVD-GINSFTC- 1011
Query: 175 ECPRGYGG 182
+CP G+ G
Sbjct: 1012 QCPVGFTG 1019
Score = 97 (39.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G RC + N C H++ C ++ C D GG C G+ G E
Sbjct: 440 FHCECLKGYTGPRCEMDINEC--HSNPCQNDA---TCLDKIGGFTCLCMPVGFKGVHCEE 494
Query: 148 AVTDCKQCPCPNQGPCVQLDD-DQVVCSECPRGYGG 182
+ +C PC N G C LD ++ +C CP G+ G
Sbjct: 495 DIDECLSNPCVNNGEC--LDKVNRFLCV-CPPGFSG 527
Score = 91 (37.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/98 (27%), Positives = 40/98 (40%)
Query: 94 PTSGGAFSRCVPC----NCNGHADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEG 147
P S G +C P C D C ++ +C + G CE C G+ G +
Sbjct: 852 PDSEGYTCQCAPGWEGERCTVDIDECLSKPCKNHALCHNIQGSYLCE-CRPGFTGGDCDS 910
Query: 148 AVTDCKQCPCPNQGPCVQ-LDDDQVVCSECPRGYGGEK 184
+ DC PC N CV ++ +C P G+ G+K
Sbjct: 911 NIDDCLSNPCQNGASCVDGINSFSCIC--LP-GFHGDK 945
Score = 89 (36.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G E + +C PC + G C Q
Sbjct: 533 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGVLCEENINNCDPDPC-HHGEC-QDGI 589
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 590 DSYTCI-CNPGYMG 602
Score = 77 (32.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C GY G+ E C PC N G C Q D
Sbjct: 198 CINLPGSFRCQ-CKPGYTGHRCESNYVPCSPSPCMNGGTCHQTSD 241
Score = 49 (22.3 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 4 RCICQDNTGGDNCERCARG 22
RC C+ G+N ER A G
Sbjct: 781 RCTCRKGFKGENSERIATG 799
Score = 43 (20.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 5 CICQDNTGGDNCE 17
CICQ G CE
Sbjct: 168 CICQSGYTGQKCE 180
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 173 (66.0 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 48/185 (25%), Positives = 76/185 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGN-----ALEGAVTDCKQCPCPNQGPCVQLDDDQ-VSNLG 58
C+CQ NT G NCERCA +Y N A + +C++C C D ++ G
Sbjct: 279 CVCQHNTAGPNCERCAP-FYNNRPWRPAEDQDPHECQRCDCNGHSETCHFDPAVFAASQG 337
Query: 59 NRTRIRIKSALGGNRTRGLALTR-QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--- 114
+ + T G R Q HY + + C+PC C+ +
Sbjct: 338 AHGGVCDNCR---DHTEGRNCERCQLHY----FRNRRPGAPIQETCIPCECDPDGAVPGA 390
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG-----PCVQLDD 168
CD +G+C+C+++ G+ C+ C G+ G C +C C G PC + +
Sbjct: 391 PCDPLTGQCVCKEHVQGERCDLCKPGFTGLTFSNP-QGCHRCDCSVLGARRDVPCDE-ET 448
Query: 169 DQVVC 173
+ VC
Sbjct: 449 GRCVC 453
Score = 132 (51.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/158 (29%), Positives = 65/158 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+C + G C++CA ++ A G C+ C C P L Q + +
Sbjct: 450 RCVCLPHVVGPKCDQCAPHHWKLA-SGR--GCEPCACD---PHNSLGP-QCNQFTGQCAC 502
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G-HADICDAESG 120
R GG R A+ RQ + T G A + C C+C+ G CD SG
Sbjct: 503 R--EGFGGLTCRAAAI-RQCP--------DRTYGDAAAGCRACDCDFRGTEGPGCDKASG 551
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC-PC 157
RC+C+ G C++C RGY A C C PC
Sbjct: 552 RCLCRPGLTGPRCDQCQRGYCDRA-----PVCVACHPC 584
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/197 (24%), Positives = 73/197 (37%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+++ G+ C+ C G+ G C +C C S LG R +
Sbjct: 398 QCVCKEHVQGERCDLCKPGFTGLTFSNP-QGCHRCDC--------------SVLGARRDV 442
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
G R L HH + G C PC C+ H + C+ +G
Sbjct: 443 PCDEETG--RCVCLPHVVGPKCDQCAPHHWKLASGR--GCEPCACDPHNSLGPQCNQFTG 498
Query: 121 RCICQDNTGGDNCE-----RCARGYYGNALEGAVTDCKQCPCP---NQGP-CVQLDDDQV 171
+C C++ GG C +C YG+A G C+ C C +GP C + +
Sbjct: 499 QCACREGFGGLTCRAAAIRQCPDRTYGDAAAG----CRACDCDFRGTEGPGCDKASGRCL 554
Query: 172 V--------CSECPRGY 180
C +C RGY
Sbjct: 555 CRPGLTGPRCDQCQRGY 571
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 49/162 (30%), Positives = 66/162 (40%)
Query: 41 PNQGPCVQLD-DDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGA 99
PN G VQL+ D S + +I+ LG + T+ GYH P++ A
Sbjct: 184 PN-GAKVQLNLMDLASGIPATQSQKIQE-LGEITNLRVNFTKLAPVPQRGYH-PPSAYYA 240
Query: 100 FSRCV---PCNCNGHADICDAESGR--------------CICQDNTGGDNCERCARGYYG 142
S+ C C+GHAD C A S R C+CQ NT G NCERCA +Y
Sbjct: 241 VSQLRLHGSCLCHGHADRC-APSSRTPASPSSAVQVHEVCVCQHNTAGPNCERCAP-FYN 298
Query: 143 N-----ALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
N A + +C++C C D S+ G
Sbjct: 299 NRPWRPAEDQDPHECQRCDCNGHSETCHFDPAVFAASQGAHG 340
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 30/88 (34%), Positives = 44/88 (50%)
Query: 103 CVPCNCN---GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC- 157
C C+C+ D+ CD E+GRC+C + G C++CA ++ A G C+ C C
Sbjct: 428 CHRCDCSVLGARRDVPCDEETGRCVCLPHVVGPKCDQCAPHHWKLA-SGR--GCEPCACD 484
Query: 158 PNQ--GP-CVQLDDDQVVCSECPRGYGG 182
P+ GP C Q C+ C G+GG
Sbjct: 485 PHNSLGPQCNQFTGQ---CA-CREGFGG 508
>RGD|1309740 [details] [associations]
symbol:Dll4 "delta-like 4 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001525
"angiogenesis" evidence=ISO] [GO:0001569 "patterning of blood
vessels" evidence=IEA;ISO] [GO:0001974 "blood vessel remodeling"
evidence=IEA;ISO] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003222 "ventricular trabecula myocardium
morphogenesis" evidence=IEA;ISO] [GO:0003344 "pericardium
morphogenesis" evidence=IEA;ISO] [GO:0005112 "Notch binding"
evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0035912
"dorsal aorta morphogenesis" evidence=IEA;ISO] [GO:0043537
"negative regulation of blood vessel endothelial cell migration"
evidence=IEA;ISO] [GO:0050767 "regulation of neurogenesis"
evidence=IEA;ISO] [GO:0061314 "Notch signaling involved in heart
development" evidence=IEA;ISO] [GO:0072554 "blood vessel
lumenization" evidence=IEA;ISO] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
Pfam:PF00008 Pfam:PF01414 Pfam:PF07657 PROSITE:PS50026
PROSITE:PS51051 SMART:SM00051 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:1309740 GO:GO:0016021 GO:GO:0007219
GO:GO:0005509 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001974 GO:GO:0043537 PROSITE:PS01186 PROSITE:PS00010
Pfam:PF12661 GeneTree:ENSGT00690000101660 OMA:LPFNFTW
OrthoDB:EOG4PZJ63 GO:GO:0072554 GO:GO:0035912 GO:GO:0050767
IPI:IPI00363966 Ensembl:ENSRNOT00000018970 UCSC:RGD:1309740
Uniprot:D3ZHH1
Length = 686
Score = 142 (55.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 52/187 (27%), Positives = 71/187 (37%)
Query: 10 NTG--GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKS 67
N+G G C C GY G E ++ C PC N G C D + N
Sbjct: 303 NSGPRGYTCT-CLPGYTGEHCELELSKCASNPCRNGGSC---KDHE-----NSYHCLCPP 353
Query: 68 ALGGNRTRGLALTRQTHYQLTGYH-HEPTSGGAFS-RCVP----CNCNGHADICD----A 117
G LT G E G +++ C P NC D C A
Sbjct: 354 GYYGQHCEHSTLTCADSPCFNGGSCRERNQGASYACECPPNFTGSNCEKKVDRCTSNPCA 413
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
G+C+ N G RC G+ G E ++DC + PC + G C L++ V C+ CP
Sbjct: 414 NGGQCL---NRGPSRTCRCRPGFTGTHCELHISDCARSPCAHGGTCHDLENGPV-CT-CP 468
Query: 178 RGYGGEK 184
G+ G +
Sbjct: 469 AGFSGRR 475
Score = 121 (47.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 49/188 (26%), Positives = 66/188 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D+ +C C GYYG E + C PC N G C + N G
Sbjct: 340 CKDHENSYHC-LCPPGYYGQHCEHSTLTCADSPCFNGGSCRE------RNQGASYACECP 392
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPCNCNGHAD--ICDAESGRCI 123
G+ + R T G + + RC P H + I D C
Sbjct: 393 PNFTGSNCEK-KVDRCTSNPCANGGQCLNRGPSRTCRCRPGFTGTHCELHISDCARSPCA 451
Query: 124 ----CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPCVQ-LDDDQVVCSEC 176
C D G C C G+ G E +T+ C PC N C L + VC+ C
Sbjct: 452 HGGTCHDLENGPVCT-CPAGFSGRRCEVRITNDACASGPCFNGATCYTGLSPNNFVCN-C 509
Query: 177 PRGYGGEK 184
P G+ G +
Sbjct: 510 PYGFVGSR 517
Score = 111 (44.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 31/108 (28%), Positives = 43/108 (39%)
Query: 91 HHEPTSGGAF-SRCVP----CNC-NGHA-DICDAESGRCI---------CQDNTGGDNCE 134
HH P G+ S P C C G+ + C+ E +C C+D+ +C
Sbjct: 291 HHSPCKNGSTCSNSGPRGYTCTCLPGYTGEHCELELSKCASNPCRNGGSCKDHENSYHC- 349
Query: 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C GYYG E + C PC N G C + + ECP + G
Sbjct: 350 LCPPGYYGQHCEHSTLTCADSPCFNGGSCRERNQGASYACECPPNFTG 397
Score = 51 (23.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 4 RCICQDNTGGDNCERCAR 21
R +C DN GD+C R +
Sbjct: 173 RVVCSDNYYGDSCSRLCK 190
>UNIPROTKB|F1SB08 [details] [associations]
symbol:F1SB08 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:CU467688 Ensembl:ENSSSCT00000007349 Uniprot:F1SB08
Length = 2175
Score = 153 (58.9 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 53/182 (29%), Positives = 71/182 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D GG CE C GY G E V +C+ PC N G C+ L + + TR +
Sbjct: 868 CRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLC 926
Query: 67 SALGGNRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCIC 124
+ RG Q ++ GY G A RC ++ C +E G C
Sbjct: 927 EENIDDCARGPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSE-GSLDC 985
Query: 125 QDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQVVCSECPRGYGG 182
T C C + G E V C Q PC N G C + D +C CP G+ G
Sbjct: 986 IQLTNDYLCV-CRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFIC-RCPPGFSG 1043
Query: 183 EK 184
+
Sbjct: 1044 AR 1045
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 46/185 (24%), Positives = 70/185 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G C C +G+ G+ + + +C PC NQG C DD + T +
Sbjct: 476 CDNLVNGYRCT-CKKGFKGHNCQVNIDECASNPCLNQGTC--FDD-----ISGYTCHCVL 527
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPC----NCNGHADICDAES-- 119
G N LA + E + +++ C P C+ D C ++
Sbjct: 528 PYTGKNCQTVLAPCSPNPCENAAVCKEAPNFESYTCLCAPGWQGQRCSVDIDECISKPCM 587
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
+C + G CE C G+ G E + DC PC N G C+ D C G
Sbjct: 588 NHGLCHNTQGSYMCE-CPPGFSGMDCEEDIDDCLANPCQNGGSCI--DGVNTFSCLCLPG 644
Query: 180 YGGEK 184
+ G+K
Sbjct: 645 FIGDK 649
Score = 114 (45.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 28/77 (36%), Positives = 35/77 (45%)
Query: 108 CNGHADICDAESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C D C + + C+D GG CE C GY G E V +C+ PC N G C+
Sbjct: 850 CEEQLDECSSNPCQHGATCRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCID 908
Query: 166 LDDDQVVCSECPRGYGG 182
L + CS CP G G
Sbjct: 909 LVN-HFKCS-CPPGTRG 923
Score = 112 (44.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 32/95 (33%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 152 FHCECLKGYAGPRCEMDINEC--HSDPCQNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 205
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
+ +C+ PC N G CV ++ C CP G+ G
Sbjct: 206 EINECQSNPCVNSGQCVD-KVNRFQCL-CPPGFTG 238
Score = 107 (42.7 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 28/75 (37%), Positives = 34/75 (45%)
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
CN H C E IC D G C C GY G + V C + PC N+G CVQ +
Sbjct: 733 CNSHP--CLNEG---ICVDGLGTYRCI-CPLGYTGKNCQTLVNLCSRSPCKNKGTCVQ-E 785
Query: 168 DDQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 786 KAESRCL-CPSGWAG 799
Score = 87 (35.7 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
IC D G C C GY G + V C + PC N+G CVQ
Sbjct: 743 ICVDGLGTYRCI-CPLGYTGKNCQTLVNLCSRSPCKNKGTCVQ 784
Score = 85 (35.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 22/84 (26%), Positives = 33/84 (39%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + D C S C+ C D+ G C C Y G + + C PC N
Sbjct: 495 NCQVNIDEC--ASNPCLNQGTCFDDISGYTCH-CVLPYTGKNCQTVLAPCSPNPCENAAV 551
Query: 163 CVQLDDDQVVCSECPRGYGGEKMS 186
C + + + C G+ G++ S
Sbjct: 552 CKEAPNFESYTCLCAPGWQGQRCS 575
Score = 83 (34.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 24/82 (29%), Positives = 35/82 (42%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
+C + D C S G C+ D +C C G+ G + +C PC N+G
Sbjct: 687 HCENNIDECTESSCFNGGTCV--DGLNSFSC-LCPVGFTGPFCLHEINECNSHPCLNEGI 743
Query: 163 CVQ-LDDDQVVCSECPRGYGGE 183
CV L + +C P GY G+
Sbjct: 744 CVDGLGTYRCIC---PLGYTGK 762
Score = 82 (33.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E + +C+ PC N G CV
Sbjct: 183 CLDKIGGFTC-LCMPGFKGVHCELEINECQSNPCVNSGQCV 222
Score = 58 (25.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C + GG C C G+ G+ + DC C C+
Sbjct: 27 CTNRNGGYGCV-CVNGWSGDDCSENIDDCAFASCTPGSTCI 66
Score = 39 (18.8 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 167 DDDQVVCSECPRGYGGEKMSPG 188
D V S P G GG + PG
Sbjct: 2139 DWSDVTTSPTPGGAGGGQRGPG 2160
Score = 35 (17.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 4 RCICQDNTGGDNCE 17
RC+C G C+
Sbjct: 790 RCLCPSGWAGAYCD 803
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 171 (65.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 48/185 (25%), Positives = 76/185 (41%)
Query: 5 CICQDNTGGDNCERCARGYYGN-----ALEGAVTDCKQCPCPNQGPCVQLDDDQ-VSNLG 58
C+CQ NT G NCERCA +Y N A + +C++C C D ++ G
Sbjct: 279 CVCQHNTAGPNCERCAP-FYNNQPWRPADDQDPHECQRCDCNGHSETCHFDPAVFAASQG 337
Query: 59 NRTRIRIKSALGGNRTRGLALTR-QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI--- 114
+ + T G R Q HY + + C+PC C+ +
Sbjct: 338 AHGGVCDNCR---DHTEGKNCERCQLHY----FRNRRPGAPIQETCIPCECDPDGAVPGV 390
Query: 115 -CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG-----PCVQLDD 168
CD +G+C+C+++ G+ C+ C G+ G C +C C G PC + +
Sbjct: 391 PCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANP-QGCHRCDCNILGSRRDLPCDE-ET 448
Query: 169 DQVVC 173
Q +C
Sbjct: 449 GQCLC 453
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/140 (30%), Positives = 58/140 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C + G C++CA Y+ G C+ C C P L Q + +
Sbjct: 450 QCLCLPHVVGPKCDQCAP-YHWKLASGR--GCEPCACD---PHNALSP-QCNQFTGQCPC 502
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G-HADICDAESG 120
R GG AL RQ + T G A S C C+C+ G CD SG
Sbjct: 503 R--EGFGGLTCNAAAL-RQCP--------DRTYGDAGSGCRACDCDFRGTEGPGCDKASG 551
Query: 121 RCICQDNTGGDNCERCARGY 140
RC+C+ G C++C RGY
Sbjct: 552 RCLCRPGLTGPRCDQCQRGY 571
Score = 115 (45.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 103 CVPCNCN---GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC- 157
C C+CN D+ CD E+G+C+C + G C++CA Y+ G C+ C C
Sbjct: 428 CHRCDCNILGSRRDLPCDEETGQCLCLPHVVGPKCDQCAP-YHWKLASGR--GCEPCACD 484
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGG 182
P+ Q + C C G+GG
Sbjct: 485 PHNALSPQCNQFTGQCP-CREGFGG 508
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 43/153 (28%), Positives = 60/153 (39%)
Query: 45 PCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV 104
P Q ++ LG T +R+ N TR LA Q Y ++ + RC+
Sbjct: 201 PATQ--SQKIRELGEITNLRV------NFTR-LAPVPQRGYHPPSAYYAVSQLRLQGRCL 251
Query: 105 PCNCNGHADICDAESGR-------------CICQDNTGGDNCERCARGYYGN-----ALE 146
C+GHAD C + G C+CQ NT G NCERCA +Y N A +
Sbjct: 252 ---CHGHADRCAPQPGAPAGPSTTVQVHDVCVCQHNTAGPNCERCAP-FYNNQPWRPADD 307
Query: 147 GAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
+C++C C D S+ G
Sbjct: 308 QDPHECQRCDCNGHSETCHFDPAVFAASQGAHG 340
Score = 69 (29.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C+C+++ G+ C+ C G+ G C +C C
Sbjct: 398 QCVCKEHVQGERCDLCKPGFTGLTYANP-QGCHRCDC 433
>UNIPROTKB|E1BSB8 [details] [associations]
symbol:E1BSB8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275
GO:GO:0030154 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.10.100.10
InterPro:IPR016186 GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
Pfam:PF12661 GeneTree:ENSGT00700000104305 SUPFAM:SSF90193
InterPro:IPR024600 Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985
EMBL:AADN02033880 EMBL:AADN02033881 EMBL:AADN02033882
IPI:IPI00818583 ProteinModelPortal:E1BSB8
Ensembl:ENSGALT00000039986 ArrayExpress:E1BSB8 Uniprot:E1BSB8
Length = 2434
Score = 161 (61.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 59/197 (29%), Positives = 82/197 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C+D+ GG CE C GY G E V +C+ PC N G C+ L + + G R R+
Sbjct: 1136 CRDHLGGYQCE-CVPGYQGVNCEYEVDECQFQPCQNGGTCIDLVNHFRCSCPPGTRGRLC 1194
Query: 64 --RIKSAL---GGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGH 111
+ + GG R G + + Y L G+ E G + C+ PCN G
Sbjct: 1195 EENVDDCISESGGPRCFNGGQCIDQIGGYSCLCLPGFAGERCEGD-INECLSNPCNPRGS 1253
Query: 112 ADICDAESG-RCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDD- 168
D + CIC+ G +CE +V D C + PC N G C +
Sbjct: 1254 LDCIQLINDYTCICRSAFTGRHCE-------------SVIDVCPRKPCQNGGTCAVASNM 1300
Query: 169 -DQVVCSECPRGYGGEK 184
D +C +CP GY G K
Sbjct: 1301 PDGFIC-QCPPGYSGAK 1316
Score = 154 (59.3 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 58/193 (30%), Positives = 78/193 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D+ G C C GY G + + C + PC N+G C Q G +TR
Sbjct: 1012 CVDSLGKYRCI-CPLGYTGKNCQTPMDLCSKSPCKNKGTCFQS--------GAQTRCDCP 1062
Query: 67 SALGG------NRTRGLALTRQ--THYQLTGYHHEPTSGGAFSRCVPCN-------CNGH 111
S G N + +A +++ T QL + + G RC C C
Sbjct: 1063 SGWTGAYCDVPNVSCQVAASQRGITVDQLCQHSGHCLNVGNTHRC-QCRVGYTGSYCEEQ 1121
Query: 112 ADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
D CD+ C+D+ GG CE C GY G E V +C+ PC N G C+ L +
Sbjct: 1122 LDECDSSPCQNGATCRDHLGGYQCE-CVPGYQGVNCEYEVDECQFQPCQNGGTCIDLVN- 1179
Query: 170 QVVCSECPRGYGG 182
CS CP G G
Sbjct: 1180 HFRCS-CPPGTRG 1191
Score = 121 (47.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 49/187 (26%), Positives = 70/187 (37%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNL----GNR 60
+C + G CE C G+ G + + DC PC N CV ++ L G++
Sbjct: 859 LCHNIQGSYLCE-CRPGFTGGDCDSNIDDCLSNPCQNGASCVDGINSFSCICLPGFHGDK 917
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES- 119
+ L G T HY + Y + G F NC + D C S
Sbjct: 918 CQTDTNECLSEPCRNGGTCT---HY-VNSYTCKCQPG--FEGT---NCENNIDECTESSC 968
Query: 120 ---GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
G C+ D C+ C G+ G + +C PC N+G CV + C C
Sbjct: 969 FNGGTCV--DGINSFTCQ-CPVGFTGPFCLMEINECDSHPCLNKGSCVD-SLGKYRCI-C 1023
Query: 177 PRGYGGE 183
P GY G+
Sbjct: 1024 PLGYTGK 1030
Score = 117 (46.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 47/179 (26%), Positives = 66/179 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ--VSNLGNRTRIR 64
C D+ G C+ CA G+ G E + +C PC + G C D + N G I
Sbjct: 520 CIDHPNGYECQ-CATGFTGVLCEENINNCDPDPC-HHGECQDGIDSYTCICNPGYMGAIC 577
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI- 123
+ + L R + GY G + NC + D C S C+
Sbjct: 578 SEQINECHSNPCLHQGRCIDL-VNGYQCNCLPGTS-----GVNCENNFDDC--ASNPCVH 629
Query: 124 --CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D NC C G+ G + +C PC N G C+ + + C CP GY
Sbjct: 630 GDCIDGINRYNCA-CKPGFTGPRCNVDIDECASSPCNNGGTCIN-EVNGFRCV-CPEGY 685
Score = 115 (45.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 48/188 (25%), Positives = 72/188 (38%)
Query: 6 ICQDN--TGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
ICQ++ + G C+ CA G+ G + +C PC N C + Q S L
Sbjct: 819 ICQESPDSEGYTCQ-CAPGWEGERCTVDIDECLSKPCKNHALCHNI---QGSYL---CEC 871
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSG-GAFSRCVPCNCNGHADICDAESGRC 122
R GG+ + Q G G +FS C+ C H D C ++ C
Sbjct: 872 R-PGFTGGDCDSNIDDCLSNPCQ-NGA--SCVDGINSFS-CI-CLPGFHGDKCQTDTNEC 925
Query: 123 ICQDNTGGDNCE--------RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
+ + G C +C G+ G E + +C + C N G CV + C
Sbjct: 926 LSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENNIDECTESSCFNGGTCVD-GINSFTC- 983
Query: 175 ECPRGYGG 182
+CP G+ G
Sbjct: 984 QCPVGFTG 991
Score = 97 (39.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G RC + N C H++ C ++ C D GG C G+ G E
Sbjct: 412 FHCECLKGYTGPRCEMDINEC--HSNPCQNDA---TCLDKIGGFTCLCMPVGFKGVHCEE 466
Query: 148 AVTDCKQCPCPNQGPCVQLDD-DQVVCSECPRGYGG 182
+ +C PC N G C LD ++ +C CP G+ G
Sbjct: 467 DIDECLSNPCVNNGEC--LDKVNRFLCV-CPPGFSG 499
Score = 91 (37.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 27/98 (27%), Positives = 40/98 (40%)
Query: 94 PTSGGAFSRCVPC----NCNGHADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEG 147
P S G +C P C D C ++ +C + G CE C G+ G +
Sbjct: 824 PDSEGYTCQCAPGWEGERCTVDIDECLSKPCKNHALCHNIQGSYLCE-CRPGFTGGDCDS 882
Query: 148 AVTDCKQCPCPNQGPCVQ-LDDDQVVCSECPRGYGGEK 184
+ DC PC N CV ++ +C P G+ G+K
Sbjct: 883 NIDDCLSNPCQNGASCVDGINSFSCIC--LP-GFHGDK 917
Score = 89 (36.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G E + +C PC + G C Q
Sbjct: 505 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGVLCEENINNCDPDPC-HHGEC-QDGI 561
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 562 DSYTCI-CNPGYMG 574
Score = 77 (32.2 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C GY G+ E C PC N G C Q D
Sbjct: 170 CINLPGSFRCQ-CKPGYTGHRCESNYVPCSPSPCMNGGTCHQTSD 213
Score = 43 (20.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 5 CICQDNTGGDNCE 17
CICQ G CE
Sbjct: 140 CICQSGYTGQKCE 152
Score = 41 (19.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 4 RCICQDNTGGDNCER 18
RC C+ G+N ER
Sbjct: 753 RCTCRKGFKGENSER 767
>MGI|MGI:1859388 [details] [associations]
symbol:Dll4 "delta-like 4 (Drosophila)" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0001569 "patterning of blood
vessels" evidence=IMP] [GO:0001974 "blood vessel remodeling"
evidence=IMP] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IMP] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IMP] [GO:0003222 "ventricular trabecula myocardium
morphogenesis" evidence=IMP] [GO:0003344 "pericardium
morphogenesis" evidence=IMP] [GO:0005112 "Notch binding"
evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005887 "integral
to plasma membrane" evidence=ISS] [GO:0007154 "cell communication"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IMP] [GO:0043537 "negative regulation of blood vessel
endothelial cell migration" evidence=IDA] [GO:0050767 "regulation
of neurogenesis" evidence=IMP] [GO:0061314 "Notch signaling
involved in heart development" evidence=IMP] [GO:0072554 "blood
vessel lumenization" evidence=IMP] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
Pfam:PF00008 Pfam:PF01414 Pfam:PF07657 PROSITE:PS50026
PROSITE:PS51051 SMART:SM00051 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1859388 GO:GO:0005887 GO:GO:0005509
GO:GO:0005112 Reactome:REACT_115202 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0000122 GO:GO:0001974 GO:GO:0043537
GO:GO:0001569 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
EMBL:AL929318 GeneTree:ENSGT00690000101660 eggNOG:NOG249767
HOGENOM:HOG000267024 HOVERGEN:HBG007139 KO:K06051 GO:GO:0061314
CTD:54567 OMA:LPFNFTW OrthoDB:EOG4PZJ63 GO:GO:0072554 GO:GO:0003209
GO:GO:0035912 GO:GO:0003344 GO:GO:0050767 GO:GO:0003222
EMBL:AF253469 EMBL:AF273454 EMBL:AB043893 EMBL:AK004739
EMBL:BC042497 EMBL:BC049130 IPI:IPI00310213 PIR:JC7569
RefSeq:NP_062327.2 UniGene:Mm.143719 ProteinModelPortal:Q9JI71
SMR:Q9JI71 STRING:Q9JI71 PRIDE:Q9JI71 Ensembl:ENSMUST00000102517
GeneID:54485 KEGG:mmu:54485 InParanoid:Q9DBU9 NextBio:311348
Bgee:Q9JI71 CleanEx:MM_DLL4 Genevestigator:Q9JI71
GermOnline:ENSMUSG00000027314 Uniprot:Q9JI71
Length = 686
Score = 143 (55.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 53/187 (28%), Positives = 70/187 (37%)
Query: 10 NTG--GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKS 67
N+G G C C GY G E ++ C PC N G C DQ N
Sbjct: 303 NSGPKGYTCT-CLPGYTGEHCELGLSKCASNPCRNGGSC----KDQE----NSYHCLCPP 353
Query: 68 ALGGNRTRGLALTRQTHYQLTGYH-HEPTSGGAFS-RCVP----CNCNGHADICD----A 117
G LT G E G +++ C P NC D C A
Sbjct: 354 GYYGQHCEHSTLTCADSPCFNGGSCRERNQGSSYACECPPNFTGSNCEKKVDRCTSNPCA 413
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
G+C N G RC G+ G E ++DC + PC + G C L++ V C+ CP
Sbjct: 414 NGGQC---QNRGPSRTCRCRPGFTGTHCELHISDCARSPCAHGGTCHDLENGPV-CT-CP 468
Query: 178 RGYGGEK 184
G+ G +
Sbjct: 469 AGFSGRR 475
Score = 125 (49.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 47/187 (25%), Positives = 63/187 (33%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D +C C GYYG E + C PC N G C + N G+
Sbjct: 340 CKDQENSYHC-LCPPGYYGQHCEHSTLTCADSPCFNGGSCRE------RNQGSSYACECP 392
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD--ICDAESGRCI- 123
G+ ++ G + RC P H + I D C
Sbjct: 393 PNFTGSNCEKKVDRCTSNPCANGGQCQNRGPSRTCRCRPGFTGTHCELHISDCARSPCAH 452
Query: 124 ---CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPCVQ-LDDDQVVCSECP 177
C D G C C G+ G E +T C PC N C L + VC+ CP
Sbjct: 453 GGTCHDLENGPVCT-CPAGFSGRRCEVRITHDACASGPCFNGATCYTGLSPNNFVCN-CP 510
Query: 178 RGYGGEK 184
G+ G +
Sbjct: 511 YGFVGSR 517
Score = 104 (41.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 30/108 (27%), Positives = 41/108 (37%)
Query: 91 HHEPTSGGAF-SRCVP----CNC-NGHA-DICDAESGRCI---------CQDNTGGDNCE 134
HH P G+ S P C C G+ + C+ +C C+D +C
Sbjct: 291 HHSPCKNGSTCSNSGPKGYTCTCLPGYTGEHCELGLSKCASNPCRNGGSCKDQENSYHC- 349
Query: 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C GYYG E + C PC N G C + + ECP + G
Sbjct: 350 LCPPGYYGQHCEHSTLTCADSPCFNGGSCRERNQGSSYACECPPNFTG 397
Score = 48 (22.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 4 RCICQDNTGGDNCERCAR 21
R IC DN G++C R +
Sbjct: 173 RVICSDNYYGESCSRLCK 190
>UNIPROTKB|F1M3T8 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00358542
Ensembl:ENSRNOT00000023414 ArrayExpress:F1M3T8 Uniprot:F1M3T8
Length = 1199
Score = 146 (56.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 28/76 (36%), Positives = 39/76 (51%)
Query: 75 RGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNC 133
+ L RQ + GY+ +PT+GG +C C C GHA++C +G+C C GD C
Sbjct: 1013 KNLTTGRQCQDCMPGYYGDPTNGG---QCTACTCGGHANVCHLHTGKCFCTTKGIKGDQC 1069
Query: 134 ERC--ARGYYGNALEG 147
+ C Y GN L G
Sbjct: 1070 QLCDSENRYVGNPLRG 1085
Score = 116 (45.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 43/169 (25%), Positives = 63/169 (37%)
Query: 24 YGNALEGAVTDCKQCPCPNQGPCVQ-LDD------DQVSNLGNRTRIRIKSALGGNRTRG 76
YG LE C C C Q L+ + SN G I S+ G + G
Sbjct: 908 YGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGWCNDPSNTGRGYCIE-GSSRGPMKLAG 966
Query: 77 LALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCER 135
+ + + E +F +C C CNGH+ C + C C++ T G C+
Sbjct: 967 VH-NSEVALDTSLCPKEKNYEWSFIQCPACQCNGHST-C-INNNVCEQCKNLTTGRQCQD 1023
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C GYYG+ G C C C L + C+ +G G++
Sbjct: 1024 CMPGYYGDPTNGG--QCTACTCGGHANVCHLHTGKCFCTT--KGIKGDQ 1068
Score = 50 (22.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C GD C+ C + G +TD
Sbjct: 61 CLCDPGWVGDQCQHCQGRFKLTEPSGYLTD 90
Score = 39 (18.8 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 251 CVCNDSWQGPDC 262
>WB|WBGene00006432 [details] [associations]
symbol:tag-53 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR000742 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0018991
GO:GO:0040011 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AF339882 EMBL:Z69790 PIR:T21694 RefSeq:NP_001024625.2
RefSeq:NP_510443.4 UniGene:Cel.8097 ProteinModelPortal:Q19981
SMR:Q19981 MINT:MINT-1127971 STRING:Q19981 PaxDb:Q19981
PRIDE:Q19981 EnsemblMetazoa:F33C8.1a GeneID:181566
KEGG:cel:CELE_F33C8.1 UCSC:F33C8.1b CTD:181566 WormBase:F33C8.1a
WormBase:F33C8.1b HOGENOM:HOG000018337 InParanoid:Q19981
OMA:MVVIFGH NextBio:914466 Uniprot:Q19981
Length = 1329
Score = 144 (55.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 34 DCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALG-GNRTRGLALTRQTHYQLTGYHH 92
DC C C C +++G+ + I+ N T G R G++
Sbjct: 941 DCPACQCNGHSTCF-------TSVGSFPPVTIEKCQSCQNHTTGAHCERCA----PGFYG 989
Query: 93 EPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCERCARGYYGNALEGAVTD 151
+ +GG C PC+C+ AD+CD SG+C C+ GD C++C Y GN G T
Sbjct: 990 DARNGGV---CSPCDCHHQADMCDPVSGQCFCKTKGVTGDRCDKCEAKYVGNPRNG--TP 1044
Query: 152 C 152
C
Sbjct: 1045 C 1045
Score = 136 (52.9 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 33/94 (35%), Positives = 44/94 (46%)
Query: 100 FSRCVPCNCNGHADICDAESG--------RC-ICQDNTGGDNCERCARGYYGNALEGAVT 150
F C C CNGH+ C G +C CQ++T G +CERCA G+YG+A G V
Sbjct: 939 FIDCPACQCNGHST-CFTSVGSFPPVTIEKCQSCQNHTTGAHCERCAPGFYGDARNGGV- 996
Query: 151 DCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C C C +Q Q C +G G++
Sbjct: 997 -CSPCDCHHQADMCDPVSGQCFCKT--KGVTGDR 1027
Score = 53 (23.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
+C C+D G NCE Y L G T+ PC ++G CV
Sbjct: 219 KCDCEDGYKGLNCE-----YQVCQLSGKSTES---PC-HEGQCV 253
Score = 46 (21.3 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 33 TDCKQCP-CPNQGPCVQLD 50
TD +QC CP+ C+ L+
Sbjct: 838 TDLEQCMWCPSTNRCINLE 856
Score = 42 (19.8 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 3 RRCICQDNTGGDNCERC 19
+ C+C G C+ C
Sbjct: 78 KACVCSKGWYGSQCDHC 94
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 169 (64.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 57/189 (30%), Positives = 79/189 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTD--CKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
CQ NT G+NCERC Y+ N + C+ C C G D +S G+
Sbjct: 344 CQHNTEGNNCERCKTNYFRNQRQDLTHPEACQPCECDPDGTVPGSVCDPLS--GHCV--- 398
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADI-CDAESGRC 122
K + G R L + QL H P G RC CN G ++ CD E+G C
Sbjct: 399 CKENVQGERCH---LCKPGFAQLA--HANPL--GC-RRCA-CNVLGTRQNVPCDDETGSC 449
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-PNQGPCVQLDDDQVVCSECPRGYG 181
C N G +C++CA G++ A G C+ C C P+ + + C +C G+
Sbjct: 450 SCLPNVVGTDCDQCAAGHWDMA-SGR--GCRPCECNPSGSHSIHCNQFTGQC-QCREGFT 505
Query: 182 GEKMSPGAQ 190
G S Q
Sbjct: 506 GRTCSAAQQ 514
Score = 167 (63.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 52/189 (27%), Positives = 74/189 (39%)
Query: 4 RCICQDNTGGDNCERCARGY----YGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
RC CQ NT G NC CA Y + A + +C+ C C D + + G
Sbjct: 276 RCECQHNTAGPNCGHCAALYNDRPWAPAEDNDPHECQLCNCNGHSASCHFDPEVFHSSGG 335
Query: 60 RTRIRIKSALGGNRTRGLALTR-QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA----DI 114
+ + T G R +T+Y + T A C PC C+ +
Sbjct: 336 VSGGVCDDCQ--HNTEGNNCERCKTNY-FRNQRQDLTHPEA---CQPCECDPDGTVPGSV 389
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC--VQLDDDQVV 172
CD SG C+C++N G+ C C G+ A + C++C C G V DD+
Sbjct: 390 CDPLSGHCVCKENVQGERCHLCKPGFAQLAHANPL-GCRRCACNVLGTRQNVPCDDETGS 448
Query: 173 CSECPRGYG 181
CS P G
Sbjct: 449 CSCLPNVVG 457
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 39/165 (23%), Positives = 61/165 (36%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+C++N G+ C C G+ A + C++C C + LG R +
Sbjct: 397 CVCKENVQGERCHLCKPGFAQLAHANPL-GCRRCAC--------------NVLGTRQNVP 441
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN---GHADICDAESGR 121
G + G H + SG C PC CN H+ C+ +G+
Sbjct: 442 CDDETGSCSCLPNVVGTDCDQCAAG-HWDMASGRG---CRPCECNPSGSHSIHCNQFTGQ 497
Query: 122 CICQDNTGGDNCER-----CARGYYGNALEGAVTDCKQCPCPNQG 161
C C++ G C C ++G+ G C +C C QG
Sbjct: 498 CQCREGFTGRTCSAAQQQVCPDRHFGDVRVG----CTECNCDFQG 538
>ZFIN|ZDB-GENE-090730-1 [details] [associations]
symbol:megf8 "multiple EGF-like-domains 8"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:1900164
"nodal signaling pathway involved in determination of lateral
mesoderm left/right asymmetry" evidence=IMP] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP] [GO:0055113
"epiboly involved in gastrulation with mouth forming second"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01344 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-090730-1 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 GO:GO:0007368 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0042074 GO:GO:0055113
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR024731 Pfam:PF12947
EMBL:BX571757 EMBL:BX571761 IPI:IPI00933480
Ensembl:ENSDART00000110951 Uniprot:F1R219
Length = 2774
Score = 162 (62.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 57/197 (28%), Positives = 79/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCK--QCPCP---NQGPC------VQLDDDQ 53
C C+ GD C + Y +G + +C C P V+ D D
Sbjct: 1089 CHCERGFTGDGVHHCNQTCYNECRQGRCSGSPLFECECSLGWTSDPATLVLSGVECDVDC 1148
Query: 54 VSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTS-GGAFSR---CVPCNCN 109
N + T I ++ +GL T H + H +P S G A +R CVPC CN
Sbjct: 1149 GCNF-HSTCITAPGIC--DQCQGLDWTTGPHCE----HCKPGSFGSALARGDGCVPCQCN 1201
Query: 110 GHAD----ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
GH D C ++G+C C +T G +CE C GYYG+ + T QC QG V
Sbjct: 1202 GHGDPLQGFCHNQTGQCYCTHHTQGPHCESCLPGYYGDPRDNG-TCFSQC----QGRSVL 1256
Query: 166 LDDDQVVCSECPRGYGG 182
L + G+ G
Sbjct: 1257 LSSSVPLSLSSSLGWHG 1273
Score = 141 (54.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 41/143 (28%), Positives = 65/143 (45%)
Query: 5 CI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-NQGPCVQLDDDQ--VSNLG 58
C+ C++NT G +C++C + G+A+ G + C+ C C N C+ D+ + N
Sbjct: 2214 CLECKNNTKGQHCDKCKPLFVGSAMGGGM--CRPCREFCRGNSDICLSKDEHNKAMENPK 2271
Query: 59 N----RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGH 111
+ R I + G + ++ Q + G E G F +C C CNGH
Sbjct: 2272 DYPLDRESIEQWATEGPTEDHAVCVSCQNNS--VGDKCESCLSGYFLLQGKCEKCQCNGH 2329
Query: 112 ADICDAESGR-CICQDNTGGDNC 133
AD C+ G C CQ+NT +C
Sbjct: 2330 ADTCNEHDGTGCPCQNNTETSSC 2352
Score = 99 (39.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 106 CNCNGHADICDAES--GRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-N 159
C CN H++ C + S C+ C++NT G +C++C + G+A+ G + C+ C C N
Sbjct: 2197 CRCNKHSN-CKSISQLDTCLECKNNTKGQHCDKCKPLFVGSAMGGGM--CRPCREFCRGN 2253
Query: 160 QGPCVQLDDDQVVCSECPRGY 180
C+ D+ E P+ Y
Sbjct: 2254 SDICLSKDEHNKAM-ENPKDY 2273
Score = 77 (32.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C +T G +CE C GYYG+ + T QC QG V L +L + +
Sbjct: 1217 QCYCTHHTQGPHCESCLPGYYGDPRDNG-TCFSQC----QGRSVLLSSSVPLSLSSS--L 1269
Query: 64 RIKSALGGN 72
A+GG+
Sbjct: 1270 GWHGAVGGH 1278
Score = 41 (19.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 4 RCICQDNTGGDNC 16
RC CQ GG +C
Sbjct: 146 RCQCQQGWGGLDC 158
Score = 37 (18.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 4 RCICQDNTGGDNCE 17
+CIC G +C+
Sbjct: 181 KCICSSGFVGQDCQ 194
Score = 36 (17.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 4/12 (33%), Positives = 7/12 (58%)
Query: 5 CICQDNTGGDNC 16
C+C + G +C
Sbjct: 1459 CVCTEGWAGSDC 1470
>UNIPROTKB|F1MPE9 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA] [GO:0046849
"bone remodeling" evidence=IEA] [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0016049 "cell growth" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003184 "pulmonary valve morphogenesis"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0002011 "morphogenesis of an epithelial
sheet" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0005634 GO:GO:0008285
GO:GO:0009986 GO:GO:0030154 GO:GO:0005887 GO:GO:0002437
GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0007050 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0043065 GO:GO:0009887 GO:GO:0030326 GO:GO:0007368
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0006959 GO:GO:0050793
GO:GO:0046579 GeneTree:ENSGT00700000104305 GO:GO:0002011
GO:GO:0072602 SUPFAM:SSF90193 KO:K02599 InterPro:IPR024600
Pfam:PF11936 CTD:4853 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:DAAA02007351 EMBL:DAAA02007352 EMBL:DAAA02007353
IPI:IPI01002388 RefSeq:XP_002686160.2 Ensembl:ENSBTAT00000010400
GeneID:513730 KEGG:bta:513730 Uniprot:F1MPE9
Length = 2471
Score = 152 (58.6 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 53/182 (29%), Positives = 71/182 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D GG CE C GY G E V +C+ PC N G C+ L + + TR +
Sbjct: 1164 CRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLC 1222
Query: 67 SALGGNRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCIC 124
+ RG Q ++ GY G A RC ++ C +E G C
Sbjct: 1223 EENVDDCARGPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSE-GSLDC 1281
Query: 125 QDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQVVCSECPRGYGG 182
T C C + G E V C Q PC N G C + D +C CP G+ G
Sbjct: 1282 IQLTNDYLCV-CRSTFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFIC-RCPPGFSG 1339
Query: 183 EK 184
+
Sbjct: 1340 AR 1341
Score = 135 (52.6 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 54/186 (29%), Positives = 72/186 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G C C +G+ G + + +C PC NQG C LDD VS T +
Sbjct: 772 CDNLVNGYRCT-CKKGFKGYNCQVNIDECASNPCLNQGTC--LDD--VSGY---TCHCVL 823
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPCNCNGHA---DICDAESGRC 122
G N LA + G E + ++S C P G DI + S C
Sbjct: 824 PYTGKNCQTVLAPCSPNPCENAGVCKEAPNFESYSCLCAP-GWQGQRCTIDIDECVSKPC 882
Query: 123 ----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
+C + G CE C G+ G E + DC PC N G CV D C
Sbjct: 883 MNHGLCHNTQGSYMCE-CPPGFSGMDCEEDIDDCLANPCQNGGSCV--DGVNTFSCLCLP 939
Query: 179 GYGGEK 184
G+ G+K
Sbjct: 940 GFTGDK 945
Score = 115 (45.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 28/77 (36%), Positives = 35/77 (45%)
Query: 108 CNGHADICDAESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C D C + + C+D GG CE C GY G E V +C+ PC N G C+
Sbjct: 1146 CEDQLDECSSNPCQHGATCRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCID 1204
Query: 166 LDDDQVVCSECPRGYGG 182
L + CS CP G G
Sbjct: 1205 LVN-HFKCS-CPPGTRG 1219
Score = 111 (44.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 32/95 (33%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 440 FHCECLKGYAGPRCEMDINEC--HSDPCKNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 493
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
+ +C+ PC N G CV ++ C CP G+ G
Sbjct: 494 EINECQSNPCVNNGQCVD-KVNRFQCL-CPPGFTG 526
Score = 109 (43.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
CN H C E +C D G C C GY G + V C + PC N+G C+Q D
Sbjct: 1029 CNSHP--CLNEG---VCVDGLGTYRCI-CPLGYTGKNCQTLVNLCSRSPCKNKGTCIQ-D 1081
Query: 168 DDQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1082 KAESRCL-CPSGWAG 1095
Score = 90 (36.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 108 CNGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C + D CD + CQD C C GY G + +C PC N+G C+ L
Sbjct: 567 CEENIDNCDPDPCHHGQCQDGIDSYTCI-CNPGYMGAICSDQIDECYSSPCLNEGRCIDL 625
Query: 167 DDDQVVCSECPRGYGG 182
+ C+ C G G
Sbjct: 626 VNGYQ-CN-CQPGTSG 639
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G E + +C PC + G C Q
Sbjct: 532 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGVLCEENIDNCDPDPC-HHGQC-QDGI 588
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 589 DSYTCI-CNPGYMG 601
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/82 (30%), Positives = 36/82 (43%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
+C + D C S G CI D +C C G+ G+ + +C PC N+G
Sbjct: 983 HCENNIDECTESSCFNGGTCI--DGINSFSC-LCPVGFTGSFCLHEINECNSHPCLNEGV 1039
Query: 163 CVQ-LDDDQVVCSECPRGYGGE 183
CV L + +C P GY G+
Sbjct: 1040 CVDGLGTYRCIC---PLGYTGK 1058
Score = 85 (35.0 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
+C D G C C GY G + V C + PC N+G C+Q
Sbjct: 1039 VCVDGLGTYRCI-CPLGYTGKNCQTLVNLCSRSPCKNKGTCIQ 1080
Score = 82 (33.9 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E + +C+ PC N G CV
Sbjct: 471 CLDKIGGFTC-LCMPGFKGVHCELEINECQSNPCVNNGQCV 510
Score = 71 (30.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C +G+ G + C PC N G C Q D
Sbjct: 198 CLNLPGSYQCQ-CPQGFTGQHCDSPYVPCAPSPCVNGGTCRQTGD 241
Score = 39 (18.8 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 167 DDDQVVCSECPRGYGGEKMSPG 188
D V S P G GG + PG
Sbjct: 2435 DWSDVTTSPTPGGAGGGQRGPG 2456
Score = 35 (17.4 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 4 RCICQDNTGGDNCE 17
RC+C G C+
Sbjct: 1086 RCLCPSGWAGAYCD 1099
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 164 (62.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 50/179 (27%), Positives = 70/179 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT G +C+ CA Y + GA +C+ C C D D
Sbjct: 225 KCMCKHNTAGPHCQHCAPLYNDRPWQAADGKTGAPRECQSCKCNGHADTCHFDMDAWLAS 284
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSG-GAFSRCVPCNCN--GHA 112
GNR+ GG T H Q G++ + A C PC+C+ G A
Sbjct: 285 GNRS--------GGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDACKPCSCHPLGSA 336
Query: 113 DI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPC 163
+ CD +G C C+ G C+RC GY+G G DC + P G C
Sbjct: 337 ALPLGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGTSGCRPCDCARSCHPLTGDC 395
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 164 (62.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 50/179 (27%), Positives = 70/179 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT G +C+ CA Y + GA +C+ C C D D
Sbjct: 266 KCMCKHNTAGPHCQHCAPLYNDRPWQAADGKTGAPRECQSCKCNGHADTCHFDMDAWLAS 325
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHEPTSG-GAFSRCVPCNCN--GHA 112
GNR+ GG T H Q G++ + A C PC+C+ G A
Sbjct: 326 GNRS--------GGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDACKPCSCHPLGSA 377
Query: 113 DI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPC 163
+ CD +G C C+ G C+RC GY+G G DC + P G C
Sbjct: 378 ALPLGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGTSGCRPCDCARSCHPLTGDC 436
>ZFIN|ZDB-GENE-980526-114 [details] [associations]
symbol:dlb "deltaB" species:7955 "Danio rerio"
[GO:0007154 "cell communication" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0021536
"diencephalon development" evidence=IGI;IMP] [GO:0030901 "midbrain
development" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001774
InterPro:IPR001881 InterPro:IPR011651 InterPro:IPR018097
Pfam:PF00008 Pfam:PF01414 Pfam:PF07657 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 ZFIN:ZDB-GENE-980526-114
GO:GO:0016021 GO:GO:0030154 GO:GO:0007219 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030901 PROSITE:PS01186
PROSITE:PS00010 HOGENOM:HOG000267024 HOVERGEN:HBG007139 KO:K06051
EMBL:AF006488 EMBL:BC076414 IPI:IPI00497041 RefSeq:NP_571033.1
UniGene:Dr.574 ProteinModelPortal:O57409 SMR:O57409 STRING:O57409
Ensembl:ENSDART00000019259 GeneID:30141 KEGG:dre:30141 CTD:30141
eggNOG:NOG298562 InParanoid:O57409 OMA:NHKPCAN OrthoDB:EOG4PZJ68
NextBio:20806616 ArrayExpress:O57409 Bgee:O57409 GO:GO:0021536
Uniprot:O57409
Length = 615
Score = 149 (57.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 52/187 (27%), Positives = 70/187 (37%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSA 68
NTG G C G+ G E + +C PC N G C L++D
Sbjct: 288 NTGQGSYTCTCRPGFGGTNCELEINECDCNPCKNGGSCNDLENDYSCTC--------PQG 339
Query: 69 LGGNRTRGLALTRQTHYQLTGYH-HEPTSGGAFSRCVPC----NCNGHADICD----AES 119
G +A+T G E +GG RC P NC D C A
Sbjct: 340 FYGKNCEIIAMTCADDPCFNGGTCEEKFTGGYVCRCPPTFTGSNCEKRLDRCSHKPCANG 399
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
G C+ + G RC G+ G+ E + DC + PC N G C +D C+ C G
Sbjct: 400 GECV---DLGASALCRCRPGFSGSRCETNIDDCARYPCQNAGTCQDGINDYT-CT-CTLG 454
Query: 180 YGGEKMS 186
+ G+ S
Sbjct: 455 FTGKNCS 461
Score = 38 (18.4 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 4 RCICQDNTGGDNCER 18
+C+C++ GG C +
Sbjct: 255 QCVCKEGWGGLFCNQ 269
>UNIPROTKB|F1M1L0 [details] [associations]
symbol:RGD1565947 "Protein RGD1565947" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0016322
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
PROSITE:PS51117 GO:GO:0060668 IPI:IPI00948933
Ensembl:ENSRNOT00000064724 ArrayExpress:F1M1L0 Uniprot:F1M1L0
Length = 408
Score = 161 (61.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 58/211 (27%), Positives = 82/211 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT G +C+ CA Y E GA +C+ C C D +
Sbjct: 98 KCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCNGHADTCHFDINVWEAS 157
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHE---PTSGGAFSRCVPCNCN--G 110
GNR+ GG T H Q G++ + P S A C C+C+ G
Sbjct: 158 GNRS--------GGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFS--APDACKACSCHPVG 207
Query: 111 HADI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-----P 158
A + CD +G C C+ G +C+RC GY+G G C+ C C P
Sbjct: 208 SAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYG----CRPCDCAGSCDP 263
Query: 159 NQGPCVQLDDDQVVCSECPRGYG-GEKMSPG 188
G C+ + D E P + K PG
Sbjct: 264 LTGDCISSNADVDWYHEVPAFHSLHNKSEPG 294
>UNIPROTKB|E1BPS6 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:DAAA02047205
EMBL:DAAA02047206 EMBL:DAAA02047207 EMBL:DAAA02047208
EMBL:DAAA02047209 EMBL:DAAA02047210 IPI:IPI00999849
Ensembl:ENSBTAT00000043858 Uniprot:E1BPS6
Length = 2772
Score = 149 (57.5 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 55/180 (30%), Positives = 69/180 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNAL----EGAVTDCKQ--CPCPNQGPCVQLDDDQVSNL 57
R C + C C RGY G+ + + DC C P CV D S+L
Sbjct: 1071 RATCLNTPLSYECH-CQRGYQGDGVTYCNRTCLEDCGHGVCSGPPDFTCV-CDLGWTSDL 1128
Query: 58 GNRTRI------RIKSALGGN-----RTRGLALTRQTHYQLTGYHHEPTSGGAFSR---- 102
T R G N RG + G H E G+F
Sbjct: 1129 PLPTPAPGPPAPRCSRDCGCNFHSHCHKRGPGFCDECQDWTWGEHCERCRPGSFGNATGS 1188
Query: 103 --CVPCNCNGHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQC 155
C PC CNGH D CD SG C CQD+T G +C+ C+ GYYG+ G C ++C
Sbjct: 1189 GGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGG--SCFREC 1246
Score = 130 (50.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 38/142 (26%), Positives = 62/142 (43%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-NQGPCVQLDDDQVSNLG---- 58
+C ++T G +CE+C + G+A+ G C+ C C N CV + +++
Sbjct: 2199 LCHNHTKGSHCEQCLPLFVGSAVGGGT--CRPCHAFCRGNSHVCVSRKELEIARREPEKY 2256
Query: 59 --NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGHAD 113
+ I + G + + + Q + G E G F +C C CNGHAD
Sbjct: 2257 SLDPDEIEHWATEGPSEDEAVCVNCQNNSY--GDKCESCLHGYFLLDGKCTKCQCNGHAD 2314
Query: 114 ICDAESGR-CICQDNTGGDNCE 134
C+ + G C CQ+NT C+
Sbjct: 2315 TCNEQDGTGCPCQNNTETGTCQ 2336
Score = 129 (50.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 35/102 (34%), Positives = 43/102 (42%)
Query: 94 PTSGGAFSRCV-PCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD 151
P G RC C CN H+ G C CQD T G++CERC G +GNA
Sbjct: 1133 PAPGPPAPRCSRDCGCNFHSHCHKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSG--G 1190
Query: 152 CKQCPC-----PNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
C+ C C P +G C L C + G + SPG
Sbjct: 1191 CRPCQCNGHGDPRRGHCDNLSG-LCFCQDHTEGAHCQLCSPG 1231
Score = 47 (21.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 5 CICQDNTGGDNC--ERCARGYYGNALEGAVTD-CKQCPC 40
C+C+ GG +C + C+ Y G+ G T C C
Sbjct: 158 CVCEPGWGGPDCSLQECS-AYCGS--HGTCTSPLGPCRC 193
Score = 41 (19.5 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C + GG +C
Sbjct: 1452 CVCAEGFGGPDC 1463
Score = 40 (19.1 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 146 EGAVTDCKQCP-CPNQGPCV 164
E + CK C CP +G C+
Sbjct: 1875 EASAPRCKWCTNCP-EGACI 1893
Score = 37 (18.1 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 168 DDQVVCSECPRGYGGEK 184
+D+ VC C G+K
Sbjct: 2273 EDEAVCVNCQNNSYGDK 2289
>RGD|1565947 [details] [associations]
symbol:Ntn4 "netrin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=ISO] InterPro:IPR001134 PROSITE:PS50189 RGD:1565947
GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 PROSITE:PS51117
GeneTree:ENSGT00700000104042 GO:GO:0060668 IPI:IPI00359984
Ensembl:ENSRNOT00000007412 ArrayExpress:F1M4Q9 Uniprot:F1M4Q9
Length = 436
Score = 161 (61.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 58/211 (27%), Positives = 82/211 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT G +C+ CA Y E GA +C+ C C D +
Sbjct: 98 KCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCNGHADTCHFDINVWEAS 157
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHE---PTSGGAFSRCVPCNCN--G 110
GNR+ GG T H Q G++ + P S A C C+C+ G
Sbjct: 158 GNRS--------GGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFS--APDACKACSCHPVG 207
Query: 111 HADI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-----P 158
A + CD +G C C+ G +C+RC GY+G G C+ C C P
Sbjct: 208 SAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYG----CRPCDCAGSCDP 263
Query: 159 NQGPCVQLDDDQVVCSECPRGYG-GEKMSPG 188
G C+ + D E P + K PG
Sbjct: 264 LTGDCISSNADVDWYHEVPAFHSLHNKSEPG 294
>UNIPROTKB|F1SND0 [details] [associations]
symbol:SVEP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002035 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00092 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50234 SMART:SM00179 SMART:SM00181
SMART:SM00327 InterPro:IPR000152 GO:GO:0005509 GO:GO:0003682
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR000436 Pfam:PF00084
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF12661 GeneTree:ENSGT00680000099691
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 OMA:IDCRLED
EMBL:CU570709 EMBL:CU570955 Ensembl:ENSSSCT00000006000
Uniprot:F1SND0
Length = 3573
Score = 172 (65.6 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 52/185 (28%), Positives = 79/185 (42%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
IC+D GG CE C GY G E + +C PC N+G CV D ++ G R +
Sbjct: 1247 ICKDQVGGFICE-CPSGYTGQLCEENINECSSSPCLNKGTCV----DGLA--GYRCTC-V 1298
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAESGR 121
K +G + + Q++ L E GG +C P C + D C ++ +
Sbjct: 1299 KGYMGLHCETEVNEC-QSNPCLNNAACEDQLGGFMCKCPPGFLGTRCEINVDECLSQPCK 1357
Query: 122 --CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D C CA G+ G + + +C+ PC NQ CV D+ +C G
Sbjct: 1358 NGATCKDGANSFRC-LCAAGFTGPRCDLNINECQSNPCRNQATCV--DELNSYSCKCQPG 1414
Query: 180 YGGEK 184
+ G +
Sbjct: 1415 FSGSR 1419
Score = 115 (45.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 29/75 (38%), Positives = 37/75 (49%)
Query: 113 DICDAESGRC----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LD 167
DI + S C IC+D GG CE C GY G E + +C PC N+G CV L
Sbjct: 1233 DIDECSSSPCHNNGICKDQVGGFICE-CPSGYTGQLCEENINECSSSPCLNKGTCVDGLA 1291
Query: 168 DDQVVCSECPRGYGG 182
+ C+ C +GY G
Sbjct: 1292 GYR--CT-CVKGYMG 1303
Score = 69 (29.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C C +TG C C +GYYG L+ +C CP P
Sbjct: 296 CKCGTHTGQFECI-CEKGYYGKGLQ---YECTACPSGTYKP 332
Score = 52 (23.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 5 CICQDNTGGDN----CERCARGYYG-NALEGAVTDCKQCPCPN 42
CIC+ G C C G Y G ++ C CP N
Sbjct: 307 CICEKGYYGKGLQYECTACPSGTYKPEGSPGGISTCLPCPDEN 349
Score = 49 (22.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 6 IC-QDNTGGDNCE-RCARGYYGNALEGAVTDCKQC 38
IC QDNTG NC C GY + EG+ TD C
Sbjct: 742 ICTQDNTGV-NCTLSCLEGY--DFTEGS-TDKYYC 772
>UNIPROTKB|F1P2W2 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:AADN02048964
EMBL:AADN02048965 EMBL:AADN02048966 EMBL:AADN02048967
EMBL:AADN02048968 EMBL:AADN02048969 EMBL:AADN02048970
EMBL:AADN02048971 EMBL:AADN02048972 EMBL:AADN02048973
EMBL:AADN02048974 EMBL:AADN02048975 EMBL:AADN02048976
EMBL:AADN02048977 EMBL:AADN02048978 EMBL:AADN02048979
EMBL:AADN02048980 EMBL:AADN02048981 IPI:IPI00572900
ProteinModelPortal:F1P2W2 Ensembl:ENSGALT00000025829 Uniprot:F1P2W2
Length = 1296
Score = 158 (60.7 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + ++GY+ +PT+GG C PC CNGHA +C+ +G+C C GD C+
Sbjct: 948 LTTGKHCETCISGYYGDPTNGGT---CQPCKCNGHASVCNTNTGKCFCTTKGIKGDECQL 1004
Query: 136 CA--RGYYGNALEG 147
C Y GN L+G
Sbjct: 1005 CEVENRYQGNPLKG 1018
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
+F +C C CNGH+ C ES C++ T G +CE C GYYG+ G C+ C C
Sbjct: 921 SFIQCPACQCNGHSK-CINESICEKCENLTTGKHCETCISGYYGDPTNGGT--CQPCKCN 977
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 978 GHASVCNTNTGKCFCTT--KGIKGDE 1001
Score = 36 (17.7 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 147 GAVTDCKQCPCPNQGPCV 164
GA+ + KQ P G C+
Sbjct: 1279 GAIRNRKQQPPAQPGTCI 1296
>ZFIN|ZDB-GENE-041014-73 [details] [associations]
symbol:dll4 "delta-like 4 (Drosophila)" species:7955
"Danio rerio" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007154 "cell
communication" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0043537 "negative
regulation of blood vessel endothelial cell migration"
evidence=IMP] [GO:0002040 "sprouting angiogenesis" evidence=IMP]
[GO:0060840 "artery development" evidence=IMP] [GO:0045765
"regulation of angiogenesis" evidence=IGI;IMP] [GO:0030947
"regulation of vascular endothelial growth factor receptor
signaling pathway" evidence=IMP] [GO:0060854 "patterning of lymph
vessels" evidence=IMP] [GO:0060855 "venous endothelial cell
migration involved in lymph vessel development" evidence=IMP]
[GO:0001946 "lymphangiogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07657
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-041014-73 GO:GO:0016021 GO:GO:0007219 GO:GO:0005509
GO:GO:0045765 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060840
GO:GO:0043537 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0002040
Pfam:PF12661 EMBL:AL929049 GeneTree:ENSGT00690000101660
HOVERGEN:HBG007139 OMA:LPFNFTW GO:GO:0030947 IPI:IPI00817774
UniGene:Dr.83136 Ensembl:ENSDART00000103320 InParanoid:Q5SPB5
GO:GO:0060854 GO:GO:0060855 Uniprot:Q5SPB5
Length = 683
Score = 143 (55.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 54/183 (29%), Positives = 69/183 (37%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSA 68
NTG G C GY G E V +C PC N G C D D+ + T +
Sbjct: 295 NTGQGSYTCICRPGYTGVNCELQVRECDSSPCKNGGLCT--DHDK-----SYTCTCLPDF 347
Query: 69 LGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RC----VPCNCNGHADICD----AES 119
G + L + G HE +G +++ C NC D C A
Sbjct: 348 EGTHCEHSLLTCADSPCFHKGRCHEKDNGRSYACECPLGYTGLNCERRMDKCTSMLCAND 407
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
G C+ GG C G+ G E + DC PC N G C ++ V CS CP G
Sbjct: 408 GLCLI---LGGKRICSCRAGFTGQRCEININDCANNPCANGGTCYDRINEYV-CS-CPPG 462
Query: 180 YGG 182
Y G
Sbjct: 463 YKG 465
Score = 44 (20.5 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 4 RCICQDNTGGDNC-ERC 19
R IC +N GD+C ++C
Sbjct: 165 RFICNENYYGDSCSKKC 181
>UNIPROTKB|E1BYK5 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111 InterPro:IPR003659
Pfam:PF07974 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AADN02030934 IPI:IPI00585255 ProteinModelPortal:E1BYK5
Ensembl:ENSGALT00000014903 Uniprot:E1BYK5
Length = 1242
Score = 154 (59.3 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 47/152 (30%), Positives = 67/152 (44%)
Query: 7 CQD--NTGGDNC-ERCARGYY---GNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSNLG 58
C D NTG C E +RG G V D CP + +Q Q + G
Sbjct: 964 CNDPSNTGKGQCLEGSSRGPMKPVGMHSAEMVLDATLCPKEKSYEWSFIQCPACQCN--G 1021
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ T I ++ + L +Q + GY+ +PT+GG +C C C+GHA+IC +
Sbjct: 1022 HSTCINSNVC---DQCKNLTTGKQCETCMPGYYGDPTNGG---QCTACTCSGHANICHMQ 1075
Query: 119 SGRCICQDN-TGGDNCERC--ARGYYGNALEG 147
+G+C C GD C+ C Y GN L G
Sbjct: 1076 TGKCFCTTKGIKGDQCQLCDSENRYLGNPLRG 1107
Score = 126 (49.4 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 44/169 (26%), Positives = 63/169 (37%)
Query: 24 YGNALEGAVTDCKQCPCPNQGPCVQ-LDD------DQVSNLGNRTRIRIKSALGGNRTRG 76
YG LE C C C Q L+ + SN G + S+ G + G
Sbjct: 930 YGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGWCNDPSNTGKGQCLE-GSSRGPMKPVG 988
Query: 77 LALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCER 135
+ T E + +F +C C CNGH+ C S C C++ T G CE
Sbjct: 989 MHSAEMV-LDATLCPKEKSYEWSFIQCPACQCNGHST-C-INSNVCDQCKNLTTGKQCET 1045
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C GYYG+ G C C C + + C+ +G G++
Sbjct: 1046 CMPGYYGDPTNGG--QCTACTCSGHANICHMQTGKCFCTT--KGIKGDQ 1090
Score = 52 (23.4 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C GD C+ C + G +TD
Sbjct: 82 CVCDQGWVGDQCQHCQGRFKLTEPSGYLTD 111
Score = 39 (18.8 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 272 CVCNDSWQGPDC 283
>ZFIN|ZDB-GENE-030131-8092 [details] [associations]
symbol:atrnl1b "attractin-like 1b" species:7955
"Danio rerio" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181
ZFIN:ZDB-GENE-030131-8092 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU464184 EMBL:BX004794
IPI:IPI00834013 RefSeq:XP_697655.4 UniGene:Dr.81107
ProteinModelPortal:E7F6C7 Ensembl:ENSDART00000042514 GeneID:569196
KEGG:dre:569196 CTD:569196 NextBio:20889561 Bgee:E7F6C7
Uniprot:E7F6C7
Length = 1364
Score = 144 (55.7 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 79 LTRQTHYQ--LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + L GY+ +PT+GG +C C CNGHA++C +G+C C GD C+
Sbjct: 1018 LTTGLHCETCLPGYYGDPTNGG---KCQACKCNGHANMCHELTGKCFCTTKGIKGDQCQL 1074
Query: 136 C--ARGYYGNALEG 147
C Y GN L G
Sbjct: 1075 CDSENRYLGNPLRG 1088
Score = 126 (49.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 44/143 (30%), Positives = 58/143 (40%)
Query: 24 YGNALEGAVTDCKQCPCPNQGPC-VQLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQ 82
YG LE DC C C + L+ G+ + + G+ RG +
Sbjct: 911 YGQCLEWQTADCLSQNCSGLRTCGLCLEQPDCGWCGDPSNTGRGQCMEGSY-RGPMKSPS 969
Query: 83 THYQ---L-TGYHHEPTSGG---AFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCE 134
H Q L TG P G AF +C C CNGH+ C C C++ T G +CE
Sbjct: 970 RHSQDMVLETGLC--PKERGFEWAFIQCPACQCNGHST-C-VNVSMCEQCRNLTTGLHCE 1025
Query: 135 RCARGYYGNALEGAVTDCKQCPC 157
C GYYG+ G C+ C C
Sbjct: 1026 TCLPGYYGDPTNGG--KCQACKC 1046
Score = 50 (22.7 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C GD C+ C + G +TD
Sbjct: 60 CVCDRGWVGDQCQHCQGRFKLTEPSGYLTD 89
Score = 39 (18.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 250 CVCNDSWQGPDC 261
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 166 (63.5 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 45/169 (26%), Positives = 68/169 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNA----LEGA-VTDCKQCPCPNQGPCVQLDDDQVSNLGN 59
C+CQ NT G NCERCA +Y N EG +C++C C D +
Sbjct: 279 CVCQHNTAGPNCERCAP-FYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDPAVFA---- 333
Query: 60 RTRIRIKSALGG------NRTRGLALTR-QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA 112
+ A GG + T G R Q HY + + C+ C C+
Sbjct: 334 ----ASQGAYGGVCDNCRDHTEGKNCERCQLHY----FRNRRPGASIQETCISCECDPDG 385
Query: 113 DI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+ CD +G+C+C+++ G+ C+ C G+ G C +C C
Sbjct: 386 AVPGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANP-QGCHRCDC 433
Score = 128 (50.1 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 32/92 (34%), Positives = 42/92 (45%)
Query: 103 CVPCNCN---GHADI-CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC- 157
C C+CN D+ CD ESGRC+C N G C++CA Y+ G C+ C C
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCAP-YHWKLASGQ--GCEPCACD 484
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
P+ Q + C C G+GG S A
Sbjct: 485 PHNSLSPQCNQFTGQCP-CREGFGGLMCSAAA 515
Score = 128 (50.1 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 41/140 (29%), Positives = 57/140 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+C N G C++CA Y+ G C+ C C P L Q + +
Sbjct: 450 RCLCLPNVVGPKCDQCAP-YHWKLASGQ--GCEPCACD---PHNSLSP-QCNQFTGQCPC 502
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G-HADICDAESG 120
R GG A+ RQ + T G + C C+C+ G CD SG
Sbjct: 503 R--EGFGGLMCSAAAI-RQCP--------DRTYGDVATGCRACDCDFRGTEGPGCDKASG 551
Query: 121 RCICQDNTGGDNCERCARGY 140
RC+C+ G C++C RGY
Sbjct: 552 RCLCRPGLTGPRCDQCQRGY 571
Score = 124 (48.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/161 (30%), Positives = 66/161 (40%)
Query: 44 GPCVQLD-DDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR 102
G VQL+ D VS + +I+ +G + TR GYH P++ A S+
Sbjct: 186 GGKVQLNLMDLVSGIPATQSQKIQE-VGEITNLRVNFTRLAPVPQRGYH-PPSAYYAVSQ 243
Query: 103 CV---PCNCNGHADICDAESGR-------------CICQDNTGGDNCERCARGYYGNA-- 144
C C+GHAD C + G C+CQ NT G NCERCA +Y N
Sbjct: 244 LRLQGSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAP-FYNNRPW 302
Query: 145 --LEGA-VTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
EG +C++C C D S+ YGG
Sbjct: 303 RPAEGQDAHECQRCDCNGHSETCHFDPAVFAASQ--GAYGG 341
>UNIPROTKB|F1MNH3 [details] [associations]
symbol:SVEP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002035 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00092 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50234 SMART:SM00179 SMART:SM00181
SMART:SM00327 InterPro:IPR000152 GO:GO:0005509 GO:GO:0003682
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR000436 Pfam:PF00084
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF12661 GeneTree:ENSGT00680000099691
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 OMA:IDCRLED
EMBL:DAAA02024486 EMBL:DAAA02024495 EMBL:DAAA02024487
EMBL:DAAA02024488 EMBL:DAAA02024489 EMBL:DAAA02024490
EMBL:DAAA02024491 EMBL:DAAA02024492 EMBL:DAAA02024493
EMBL:DAAA02024494 IPI:IPI00686143 Ensembl:ENSBTAT00000001939
Uniprot:F1MNH3
Length = 3573
Score = 171 (65.3 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 52/185 (28%), Positives = 76/185 (41%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
IC+D G CE C GY G E V +C PC N+G CV L +
Sbjct: 1247 ICKDRVGEFICE-CPSGYTGQLCEDNVNECISSPCLNKGTCVD-------GLAGYHCTCV 1298
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAESGR 121
K +G + + Q+ L E GG +C P C+ + D C ++ +
Sbjct: 1299 KGYMGLHCETEVNEC-QSSPCLNNAVCEDQLGGFLCKCPPGFLGTRCDINMDECLSQPCK 1357
Query: 122 --CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D G C+ CA G+ G E + +C+ PC NQ CV D+ +C G
Sbjct: 1358 NGATCKDGANGFRCQ-CAAGFTGTHCELNIDECQSNPCKNQATCV--DELNAYSCKCQPG 1414
Query: 180 YGGEK 184
+ G +
Sbjct: 1415 FSGSR 1419
>UNIPROTKB|E9PBN8 [details] [associations]
symbol:SVEP1 "Sushi, von Willebrand factor type A, EGF and
pentraxin domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002035 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00092
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50234 SMART:SM00179
SMART:SM00181 SMART:SM00327 InterPro:IPR000152 GO:GO:0005737
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR000436
Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 EMBL:AL158158
EMBL:AL592463 EMBL:AL354982 IPI:IPI00939415 HGNC:HGNC:15985
ProteinModelPortal:E9PBN8 PRIDE:E9PBN8 Ensembl:ENST00000302728
ArrayExpress:E9PBN8 Bgee:E9PBN8 Uniprot:E9PBN8
Length = 1549
Score = 167 (63.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 52/185 (28%), Positives = 80/185 (43%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
+C+D G CE C GY G E + +C PC N+G CV D V+ G R +
Sbjct: 1245 VCKDLVGEFICE-CPSGYTGQRCEENINECSSSPCLNKGICV----DGVA--GYRCTC-V 1296
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAESGR 121
K +G + + Q++ L E GG +C P C + D C ++ +
Sbjct: 1297 KGFVGLHCETEVNEC-QSNPCLNNAVCEDQVGGFLCKCPPGFLGTRCGKNVDECLSQPCK 1355
Query: 122 --CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D C CA G+ G+ E + +C+ PC NQ CV D+ +C G
Sbjct: 1356 NGATCKDGANSFRC-LCAAGFTGSHCELNINECQSNPCRNQATCV--DELNSYSCKCQPG 1412
Query: 180 YGGEK 184
+ G++
Sbjct: 1413 FSGKR 1417
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 162 (62.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 46/180 (25%), Positives = 70/180 (38%)
Query: 5 CICQDNTGGDNCERCARGYY----GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G CE C +Y G A + C C C + D + GNR
Sbjct: 310 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNR 369
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCNGHADI---CD 116
+ + + T G R H G+ + + + C C C+ + C+
Sbjct: 370 SGGVCLNCR--HNTAG----RNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSLGKSCN 423
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
SG+C+C+ G C RCA+GY + VT C + P ++Q CS+C
Sbjct: 424 QSSGQCVCKPGVTGTTCNRCAKGYQQS--RSTVTPCIKIPTKADFIGSSHSEEQDQCSKC 481
Score = 110 (43.8 bits), Expect = 0.00090, P = 0.00090
Identities = 25/62 (40%), Positives = 29/62 (46%)
Query: 106 CNCNGHADICDAES-GR--CICQDNTGGDNCERCARGYY----GNALEGAVTDCKQCPCP 158
C CNGHA C + GR C C+ NT G CE C +Y G A + C C C
Sbjct: 291 CKCNGHASRCIFDKMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNC- 349
Query: 159 NQ 160
NQ
Sbjct: 350 NQ 351
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 162 (62.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 46/180 (25%), Positives = 70/180 (38%)
Query: 5 CICQDNTGGDNCERCARGYY----GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G CE C +Y G A + C C C + D + GNR
Sbjct: 310 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNR 369
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCNGHADI---CD 116
+ + + T G R H G+ + + + C C C+ + C+
Sbjct: 370 SGGVCLNCR--HNTAG----RNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSLGKSCN 423
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
SG+C+C+ G C RCA+GY + VT C + P ++Q CS+C
Sbjct: 424 QSSGQCVCKPGVTGTTCNRCAKGYQQS--RSTVTPCIKIPTKADFIGSSHSEEQDQCSKC 481
Score = 110 (43.8 bits), Expect = 0.00090, P = 0.00090
Identities = 25/62 (40%), Positives = 29/62 (46%)
Query: 106 CNCNGHADICDAES-GR--CICQDNTGGDNCERCARGYY----GNALEGAVTDCKQCPCP 158
C CNGHA C + GR C C+ NT G CE C +Y G A + C C C
Sbjct: 291 CKCNGHASRCIFDKMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNC- 349
Query: 159 NQ 160
NQ
Sbjct: 350 NQ 351
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 163 (62.4 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 45/160 (28%), Positives = 64/160 (40%)
Query: 5 CICQDNTGGDNCERCARGYY----GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C+ NT G CERC Y+ G A + +CK C C + + + G
Sbjct: 461 CACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFNLELYKLSG-- 518
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHAD-ICD 116
R+ + N R HY GY+ + T + C C+C+ G C+
Sbjct: 519 ---RVSGGVCYNCQHDTT-GRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCN 574
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP 156
SG+C C++ G C RCARGY V C + P
Sbjct: 575 HLSGQCPCKEGVTGLTCNRCARGY--QQTRSHVAPCIKVP 612
>FB|FBgn0027594 [details] [associations]
symbol:drpr "draper" species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0008345 "larval
locomotory behavior" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IMP;TAS] [GO:0031224 "intrinsic to membrane" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035212 "cell competition in a
multicellular organism" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IGI] [GO:0043277
"apoptotic cell clearance" evidence=IMP] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IMP] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0048190 EMBL:AE014296 GO:GO:0016322 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0008345 GO:GO:0035071
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0031224
GO:GO:0043277 Pfam:PF12661 GO:GO:0035212
GeneTree:ENSGT00690000101914 RefSeq:NP_728660.2 UniGene:Dm.3167
ProteinModelPortal:Q9W0A0 SMR:Q9W0A0 DIP:DIP-19640N
MINT:MINT-7555415 STRING:Q9W0A0 EnsemblMetazoa:FBtr0072799
GeneID:38218 KEGG:dme:Dmel_CG2086 UCSC:CG2086-RB CTD:38218
FlyBase:FBgn0027594 InParanoid:Q9W0A0 OMA:ALCDHIS OrthoDB:EOG4RXWF6
ChiTaRS:drpr GenomeRNAi:38218 NextBio:807575 Bgee:Q9W0A0
Uniprot:Q9W0A0
Length = 1031
Score = 151 (58.2 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 54/199 (27%), Positives = 79/199 (39%)
Query: 4 RCICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPC-PNQGPCVQ---------LDDD 52
RC+C+ + GG +CE C GYYG + C P+ G C+ +
Sbjct: 551 RCVCKQDWGGVHCETNCRSGYYGENCDKVCRCLNNSSCDPDSGNCICSAGWTGADCAEPC 610
Query: 53 QVSNLGNRTRIRIKSALGGNRT----RGLALTRQTHYQLTGYHHEPTSGGAFSR-C-VPC 106
G + R L GN++ G L R + LT H P G + C + C
Sbjct: 611 PPGFYGMECKERCPEILHGNKSCDHITGEILCRTGYIGLTCEH--PCPAGLYGPGCKLKC 668
Query: 107 NCNGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
NC H C+ +G+C C G NC E C YG +G ++C C + C +
Sbjct: 669 NCE-HGGECNHVTGQCQCLPGWTGSNCNESCPTDTYG---QGCA---QRCRCVHHKVCRK 721
Query: 166 LDDDQVVCSECPRGYGGEK 184
D +C C G+ G +
Sbjct: 722 ADG---MCI-CETGWSGTR 736
Score = 132 (51.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/92 (33%), Positives = 44/92 (47%)
Query: 98 GAFSR-CVP-CNCNGHADI-CDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDCK 153
G F C C C+ + + CDA +GRC+C+ + GG +CE C GYYG +
Sbjct: 525 GKFGHDCAQKCQCDFNNSLACDATNGRCVCKQDWGGVHCETNCRSGYYGENCDKVCRCLN 584
Query: 154 QCPC-PNQGPCV-QLDDDQVVCSE-CPRGYGG 182
C P+ G C+ C+E CP G+ G
Sbjct: 585 NSSCDPDSGNCICSAGWTGADCAEPCPPGFYG 616
Score = 117 (46.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 51/192 (26%), Positives = 74/192 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDDDQVSNLGNRTRIRI 65
C+ G+NC++ R ++ + +C C G C + G + R
Sbjct: 567 CRSGYYGENCDKVCRCLNNSSCDPDSGNCI-CSAGWTGADCAE--PCPPGFYGMECKERC 623
Query: 66 KSALGGNRT----RGLALTRQTHYQLTGYHHEPTSGGAFSR-C-VPCNCNGHADICDAES 119
L GN++ G L R + LT H P G + C + CNC H C+ +
Sbjct: 624 PEILHGNKSCDHITGEILCRTGYIGLTCEH--PCPAGLYGPGCKLKCNCE-HGGECNHVT 680
Query: 120 GRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQCP----CPN-QGPCV-QLDDDQVV 172
G+C C G NC E C YG +G C+ C C G C+ +
Sbjct: 681 GQCQCLPGWTGSNCNESCPTDTYG---QGCAQRCR-CVHHKVCRKADGMCICETGWSGTR 736
Query: 173 CSE-CPRGYGGE 183
C E CP G+ GE
Sbjct: 737 CDEVCPEGFYGE 748
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 52/202 (25%), Positives = 69/202 (34%)
Query: 4 RCICQDNTGGDNCE-RCARGYYGNALEGAVTDCK-QCPCPNQGPCVQLDDD-QVSN--LG 58
+C C GG C+ C G+YG +C QC C N C D + + G
Sbjct: 116 KCKCDHGYGGPACDINCPPGWYGR-------NCSMQCDCLNNAVCEPFSGDCECAKGYTG 168
Query: 59 NRTR-IRIKSALGGNRTRGLALTR--QTHYQLTGYHHEPTSGGAFS--RCVP-------- 105
R I + G N + + H+ P G RC
Sbjct: 169 ARCADICPEGFFGANCSEKCRCENGGKCHHVSGECQCAPGFTGPLCDMRCPDGKHGAQCQ 228
Query: 106 --CNCNGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQCPCPNQGP 162
C C C E+G C+C GD C +C G YG + + C C P
Sbjct: 229 QDCPCQNDGK-CQPETGACMCNPGWTGDVCANKCPVGSYGPGCQ------ESCECYKGAP 281
Query: 163 CVQLDDDQVVCSECPRGYGGEK 184
C + C ECP GY GE+
Sbjct: 282 CHHITGQ---C-ECPPGYRGER 299
Score = 56 (24.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCK-QCPCPNQGPC 46
C+C G CE C G +G DC +C C N C
Sbjct: 421 CLCAPGWRGPTCEESCEPGTFGQ-------DCALRCDCQNGAKC 457
Score = 51 (23.0 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 4 RCICQDNTGGDNCER-CARGYYGNALEGAVTDC-KQCPCPNQGPC 46
+C+C C+R C ++G DC K C C N C
Sbjct: 463 QCLCTAGWKNIKCDRPCDLNHFGQ-------DCAKVCDCHNNAAC 500
Score = 39 (18.8 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 4 RCI--CQDNTGGDNC 16
RC CQ NT G NC
Sbjct: 299 RCFDECQLNTYGFNC 313
>FB|FBgn0039528 [details] [associations]
symbol:dsd "distracted" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008039 "synaptic
target recognition" evidence=IMP] InterPro:IPR000742
InterPro:IPR015915 PROSITE:PS50026 SMART:SM00181 EMBL:AE014297
GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:MVVIFGH FlyBase:FBgn0039528
RefSeq:NP_651571.3 UniGene:Dm.7161 ProteinModelPortal:Q9VB20
SMR:Q9VB20 MINT:MINT-977402 STRING:Q9VB20
EnsemblMetazoa:FBtr0301390 GeneID:43315 KEGG:dme:Dmel_CG5634
UCSC:CG5634-RA CTD:43315 InParanoid:Q9VB20 PhylomeDB:Q9VB20
GenomeRNAi:43315 NextBio:833301 ArrayExpress:Q9VB20 Bgee:Q9VB20
Uniprot:Q9VB20
Length = 1323
Score = 148 (57.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 100 FSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
F+ C CNCNGH+ D + C + T G +CE+C GY+GN + G C++C C
Sbjct: 943 FTSCPRCNCNGHSYCNDQQHCEQPCNNLTTGAHCEKCRTGYWGNPINGG--KCQRCDCNG 1000
Query: 160 QGPCVQLDDDQVVCS 174
QG D + C+
Sbjct: 1001 QGVYCHPDTGKCFCT 1015
Score = 127 (49.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 79 LTRQTHYQL--TGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQDN-TGGDNCER 135
LT H + TGY P +GG +C C+CNG C ++G+C C GD+CE+
Sbjct: 970 LTTGAHCEKCRTGYWGNPINGG---KCQRCDCNGQGVYCHPDTGKCFCTTKGIVGDHCEK 1026
Query: 136 C--ARGYYGNALEGA 148
C Y+G+ L+G+
Sbjct: 1027 CDSQNHYHGDPLKGS 1041
Score = 44 (20.5 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 4 RCICQDNTGGDNCERC 19
+C+C D G C+ C
Sbjct: 71 QCLCADGWQGPECQFC 86
Score = 43 (20.2 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 4 RCICQDNTGGDNCER 18
RC C + GD+C +
Sbjct: 272 RCSCYEGFAGDDCSQ 286
>UNIPROTKB|F1PS94 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 InterPro:IPR022336 PRINTS:PR01985 EMBL:AAEX03011027
Ensembl:ENSCAFT00000016889 Uniprot:F1PS94
Length = 2471
Score = 158 (60.7 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 56/193 (29%), Positives = 76/193 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C+D GG CE C GY G E V +C+ PC N G CV L + + G R +
Sbjct: 1164 CRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCVDLVNHFKCSCPPGTRGLLC 1222
Query: 64 --RIKSALGGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGHADI 114
I +GG G + R Y L G+ E G + C+ PC+ G D
Sbjct: 1223 EENIDDCVGGPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGD-INECLSNPCSSEGSLDC 1281
Query: 115 CDAESGR-CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQV 171
+ C+C+ G +CE + C Q PC N G C + D
Sbjct: 1282 IQLTNDYLCVCRSAFTGRHCETF------------IDVCPQMPCLNGGTCAVASNMPDGF 1329
Query: 172 VCSECPRGYGGEK 184
+C CP G+ G K
Sbjct: 1330 IC-RCPPGFSGAK 1341
Score = 121 (47.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 48/186 (25%), Positives = 67/186 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G C C +G+ G + + +C PC NQG C N+ T +
Sbjct: 772 CDNLVNGYRCT-CKKGFKGYNCQVNIDECASNPCLNQGTCFD-------NISGYTCHCVL 823
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPCNCNGHA---DICDAESGRC 122
G N LA + E +++ C P G DI + S C
Sbjct: 824 PYTGKNCQTVLAPCSPNPCENAAVCKEAPDFESYTCLCAP-GWQGQRCTIDIDECVSKPC 882
Query: 123 ----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
+C + G CE C G+ G E + DC PC N G CV D C
Sbjct: 883 MNHGLCHNTQGSYMCE-CPPGFSGMDCEDDIDDCLANPCQNGGSCV--DGVNTFSCLCHP 939
Query: 179 GYGGEK 184
G+ G+K
Sbjct: 940 GFIGDK 945
Score = 115 (45.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 29/77 (37%), Positives = 35/77 (45%)
Query: 108 CNGHADICDAESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C D C + + C+D GG CE C GY G E V +C+ PC N G CV
Sbjct: 1146 CEEQLDECSSNPCQHGATCRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCVD 1204
Query: 166 LDDDQVVCSECPRGYGG 182
L + CS CP G G
Sbjct: 1205 LVN-HFKCS-CPPGTRG 1219
Score = 112 (44.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 32/95 (33%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 440 FHCECLKGYAGPRCEMDINEC--HSDPCQNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 493
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
+ +C+ PC N G CV ++ C CP G+ G
Sbjct: 494 EINECQSNPCVNNGQCVD-KVNRFQCL-CPPGFTG 526
Score = 108 (43.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
CN H C E IC D G C C GY G + V C + PC N+G C+Q +
Sbjct: 1029 CNSHP--CLNEG---ICVDGLGTYRCT-CPLGYTGKNCQTLVNLCSRSPCKNKGTCIQ-E 1081
Query: 168 DDQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1082 KAESRCL-CPSGWAG 1095
Score = 88 (36.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
IC D G C C GY G + V C + PC N+G C+Q
Sbjct: 1039 ICVDGLGTYRCT-CPLGYTGKNCQTLVNLCSRSPCKNKGTCIQ 1080
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G E + +C PC + G C Q
Sbjct: 532 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGVLCEENIDNCDPDPC-HHGQC-QDGI 588
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 589 DSYTCI-CNPGYMG 601
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/76 (30%), Positives = 30/76 (39%)
Query: 108 CNGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C + D CD + CQD C C GY G + +C PC N G C+ L
Sbjct: 567 CEENIDNCDPDPCHHGQCQDGIDSYTCI-CNPGYMGAICSDQIDECYSSPCLNDGRCIDL 625
Query: 167 DDDQVVCSECPRGYGG 182
+ C+ C G G
Sbjct: 626 VNGYQ-CN-CQPGTSG 639
Score = 86 (35.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 24/81 (29%), Positives = 33/81 (40%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
+C + D C S G C+ D +C C G+ G + +C PC N+G
Sbjct: 983 HCENNIDECTESSCFNGGTCV--DGINSFSC-LCPLGFTGPFCLHEINECNSHPCLNEGI 1039
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
CV D CP GY G+
Sbjct: 1040 CV--DGLGTYRCTCPLGYTGK 1058
Score = 82 (33.9 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E + +C+ PC N G CV
Sbjct: 471 CLDKIGGFTC-LCMPGFKGVHCELEINECQSNPCVNNGQCV 510
Score = 79 (32.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C + G +CE C +GY G E + +C PC N C+
Sbjct: 433 CVNTDGAFHCE-CLKGYAGPRCEMDINECHSDPCQNDATCL 472
Score = 71 (30.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C +G+ G + C PC N G C Q D
Sbjct: 198 CLNLPGSYQCQ-CPQGFTGKHCDSPYVPCAPSPCVNGGTCRQTGD 241
Score = 67 (28.6 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C +C G+ G E + +C + C N G CV
Sbjct: 964 CSDYVNSYTC-KCQAGFDGVHCENNIDECTESSCFNGGTCV 1003
Score = 64 (27.6 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D +C C G+ G + +C PC N+G CV
Sbjct: 1002 CVDGINSFSC-LCPLGFTGPFCLHEINECNSHPCLNEGICV 1041
Score = 62 (26.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D +C C G+ G+ + + +C PC N G C
Sbjct: 926 CVDGVNTFSC-LCHPGFIGDKCQTDMNECLSEPCKNGGTC 964
Score = 62 (26.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G+ G + + DC PC N C+
Sbjct: 509 CVDKVNRFQC-LCPPGFTGPVCQIDIDDCSSTPCLNGAKCI 548
Score = 62 (26.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-C-KQCPCPNQGPC 46
C+ Q G C RCA G+ G+ + + T C PC N G C
Sbjct: 79 CVAQAMLGKATC-RCALGFTGDDCQYSTTHPCFVSHPCLNGGTC 121
Score = 59 (25.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 7 CQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ TG E C G+ G E + DC C N G CV
Sbjct: 236 CRQ-TGDFTFECNCLPGFEGITCERNIDDCPNHKCQNGGVCV 276
Score = 58 (25.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C + GG C C G+ G+ + DC C C+
Sbjct: 315 CTNRNGGYGCV-CVNGWSGDDCSENIDDCAFASCTPGSTCI 354
Score = 54 (24.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 6 ICQDNT-GGDNCERCARGYYGNALEGAVTDCKQC---PCPNQGPCVQLD 50
+C N G C +G+ G V +C PC + G CV D
Sbjct: 389 LCDTNPLNGQYICTCPQGFKGADCTEDVDECAMANSNPCEHAGKCVNTD 437
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 5 CICQDNTGGDNC-ERCARGYYGNALEGAVTDCK----QCPCPN--QGPCVQLDDDQVSN 56
C+C + GD+C E + + G+ + C CP G LDD +SN
Sbjct: 324 CVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISN 382
Score = 39 (18.8 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 167 DDDQVVCSECPRGYGGEKMSPG 188
D V S P G GG + PG
Sbjct: 2435 DWSDVTTSPTPGGAGGGQRGPG 2456
>RGD|621190 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621190 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 eggNOG:NOG304142 HOGENOM:HOG000113554
HOVERGEN:HBG108128 OrthoDB:EOG4JHCDR EMBL:AABR03001918
EMBL:AABR03001941 EMBL:AABR03004237 EMBL:AB011534 IPI:IPI00766905
UniGene:Rn.21378 ProteinModelPortal:Q9QYP0 IntAct:Q9QYP0
STRING:Q9QYP0 PhosphoSite:Q9QYP0 PRIDE:Q9QYP0
Ensembl:ENSRNOT00000027831 UCSC:RGD:621190 InParanoid:Q9QYP0
Genevestigator:Q9QYP0 Uniprot:Q9QYP0
Length = 2788
Score = 154 (59.3 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 56/180 (31%), Positives = 70/180 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNAL----EGAVTDCKQ--CPCPNQGPCVQLDDDQVSNL 57
R C + C C RGY G+ + + DC C P CV D S+L
Sbjct: 1088 RATCLNTPLSYECH-CQRGYQGDGITHCNRTCLEDCGHGVCSGPPDFTCV-CDLGWTSDL 1145
Query: 58 GNRTRI------RIKSALGGN-----RTRGLALTRQTHYQLTGYHHEPTSGGAFSR---- 102
T R G N R RG + G H E G+F
Sbjct: 1146 PPPTPAPGPPAPRCSRDCGCNFHSHCRRRGPGYCDECQDWTWGEHCERCRPGSFGNATGS 1205
Query: 103 --CVPCNCNGHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQC 155
C PC CNGH D CD SG C CQD+T G +C+ C+ GYYG+ G C ++C
Sbjct: 1206 GGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQICSPGYYGDPRAGG--SCFREC 1263
Score = 133 (51.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 40/142 (28%), Positives = 63/142 (44%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-NQGPCVQLDDDQVSNLG---- 58
+C+++T G +CE+C + G+AL G C+ C C N CV + +++
Sbjct: 2215 LCRNHTKGSHCEQCLPLFVGSALGGGT--CRPCHAFCRGNSHVCVSRKELEMARREPEKY 2272
Query: 59 --NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGHAD 113
+ I A G + + + Q + G E G F +C C CNGHAD
Sbjct: 2273 SLDPEEIEAWVAEGPSEDEAVCVNCQNNSY--GDRCESCLHGYFLLDGKCTKCQCNGHAD 2330
Query: 114 ICDAESGR-CICQDNTGGDNCE 134
C+ + G C CQ+NT C+
Sbjct: 2331 TCNEQDGTGCPCQNNTETGVCQ 2352
Score = 44 (20.5 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 146 EGAVTDCKQCP-CPNQGPCV 164
E +V CK C CP +G C+
Sbjct: 1891 EASVPRCKWCTNCP-EGACI 1909
Score = 42 (19.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
CIC + GG +C
Sbjct: 1469 CICAEGFGGPDC 1480
>MGI|MGI:1888978 [details] [associations]
symbol:Ntn4 "netrin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0016322 "neuron
remodeling" evidence=IDA] [GO:0043237 "laminin-1 binding"
evidence=IDA] [GO:0060668 "regulation of branching involved in
salivary gland morphogenesis by extracellular matrix-epithelial
cell signaling" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
MGI:MGI:1888978 GO:GO:0016322 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 GO:GO:0043237 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:59277 eggNOG:NOG329215
HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK GO:GO:0060668
EMBL:AF268066 EMBL:AF281278 EMBL:AC124585 EMBL:AC151976
IPI:IPI00119840 RefSeq:NP_067295.2 UniGene:Mm.483868
ProteinModelPortal:Q9JI33 SMR:Q9JI33 STRING:Q9JI33
PhosphoSite:Q9JI33 PRIDE:Q9JI33 Ensembl:ENSMUST00000020204
GeneID:57764 KEGG:mmu:57764 HOGENOM:HOG000060085 InParanoid:Q9JI33
OrthoDB:EOG4M0F17 NextBio:313932 Bgee:Q9JI33 CleanEx:MM_NTN4
Genevestigator:Q9JI33 GermOnline:ENSMUSG00000020019 Uniprot:Q9JI33
Length = 628
Score = 160 (61.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 54/186 (29%), Positives = 74/186 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
RC+C+ NT G +C+ CA Y E GA +C+ C C D +
Sbjct: 292 RCMCKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCNGHADTCHFDVNVWEAS 351
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHE---PTSGGAFSRCVPCNCN--G 110
GNR+ GG T H Q G++ + P S A C C+C+ G
Sbjct: 352 GNRS--------GGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFS--APDACKACSCHPVG 401
Query: 111 HADI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
A + CD +G C C+ G +C+RC GY+G G C+ C C G C
Sbjct: 402 SAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYG----CRPCDCA--GSC 455
Query: 164 VQLDDD 169
L D
Sbjct: 456 DPLTGD 461
>UNIPROTKB|Q5VV63 [details] [associations]
symbol:ATRNL1 "Attractin-like protein 1" species:9606 "Homo
sapiens" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 EMBL:AY442317 EMBL:AL357059
EMBL:AC022542 EMBL:AC091667 EMBL:AL355530 EMBL:AL356100
EMBL:AL392087 EMBL:AL512304 EMBL:BC047716 EMBL:BC139916
EMBL:BC139923 EMBL:AK127277 EMBL:AB011106 IPI:IPI00297233
IPI:IPI00749514 PIR:T00266 RefSeq:NP_997186.1 UniGene:Hs.501127
HSSP:P02468 ProteinModelPortal:Q5VV63 SMR:Q5VV63 IntAct:Q5VV63
PhosphoSite:Q5VV63 DMDM:189081675 PRIDE:Q5VV63 DNASU:26033
Ensembl:ENST00000355044 GeneID:26033 KEGG:hsa:26033 UCSC:uc001lcf.3
UCSC:uc001lcg.3 CTD:26033 GeneCards:GC10P116843 H-InvDB:HIX0021959
HGNC:HGNC:29063 HPA:HPA038070 MIM:612869 neXtProt:NX_Q5VV63
PharmGKB:PA134961599 eggNOG:NOG242225 HOVERGEN:HBG004312
InParanoid:Q5VV63 OMA:YTQQKVS OrthoDB:EOG4QC14F PhylomeDB:Q5VV63
ChiTaRS:ATRNL1 GenomeRNAi:26033 NextBio:47842 ArrayExpress:Q5VV63
Bgee:Q5VV63 CleanEx:HS_ATRNL1 Genevestigator:Q5VV63
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
Uniprot:Q5VV63
Length = 1379
Score = 152 (58.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 47/152 (30%), Positives = 66/152 (43%)
Query: 7 CQD--NTGGDNC-ERCARG---YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSNLG 58
C D NTG +C E +RG G V D CP + +Q Q + G
Sbjct: 961 CNDPSNTGRGHCIEGSSRGPMKLIGMHHSEMVLDTNLCPKEKNYEWSFIQCPACQCN--G 1018
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ T I + + L +Q + GY+ +PT+GG +C C C+GHA+IC
Sbjct: 1019 HSTCINNNVC---EQCKNLTTGKQCQDCMPGYYGDPTNGG---QCTACTCSGHANICHLH 1072
Query: 119 SGRCICQDN-TGGDNCERC--ARGYYGNALEG 147
+G+C C GD C+ C Y GN L G
Sbjct: 1073 TGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG 1104
Score = 119 (46.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 40/167 (23%), Positives = 61/167 (36%)
Query: 24 YGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQ 82
YG LE C C C Q L+ + + + G+ + L
Sbjct: 927 YGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGWCNDPSNTGRGHCIEGSSRGPMKLIGM 986
Query: 83 THYQL---TGY-HHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCA 137
H ++ T E +F +C C CNGH+ C + C C++ T G C+ C
Sbjct: 987 HHSEMVLDTNLCPKEKNYEWSFIQCPACQCNGHST-C-INNNVCEQCKNLTTGKQCQDCM 1044
Query: 138 RGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
GYYG+ G C C C L + C+ +G G++
Sbjct: 1045 PGYYGDPTNGG--QCTACTCSGHANICHLHTGKCFCTT--KGIKGDQ 1087
Score = 50 (22.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C GD C+ C + G +TD
Sbjct: 79 CLCDPGWVGDQCQHCQGRFKLTEPSGYLTD 108
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 269 CVCNDSWQGPDC 280
>UNIPROTKB|E2R6C0 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 CTD:26033 OMA:YTQQKVS
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:AAEX03015548 EMBL:AAEX03015549
EMBL:AAEX03015550 EMBL:AAEX03015551 EMBL:AAEX03015552
RefSeq:XP_544031.3 Ensembl:ENSCAFT00000018678 GeneID:486901
KEGG:cfa:486901 NextBio:20860606 Uniprot:E2R6C0
Length = 1381
Score = 152 (58.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 47/152 (30%), Positives = 66/152 (43%)
Query: 7 CQD--NTGGDNC-ERCARG---YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSNLG 58
C D NTG +C E +RG G V D CP + +Q Q + G
Sbjct: 962 CNDPSNTGRGHCIEGSSRGPMKLVGMHNNEMVLDTSLCPKEKNYEWSFIQCPACQCN--G 1019
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ T I + + L +Q + GY+ +PT+GG +C C C+GHA+IC
Sbjct: 1020 HSTCINNNVC---EQCKNLTTGKQCQDCMPGYYGDPTNGG---QCTACTCSGHANICHMH 1073
Query: 119 SGRCICQDN-TGGDNCERC--ARGYYGNALEG 147
+G+C C GD C+ C Y GN L G
Sbjct: 1074 TGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG 1105
Score = 115 (45.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 25/87 (28%), Positives = 39/87 (44%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+F +C C CNGH+ C + C C++ T G C+ C GYYG+ G C C C
Sbjct: 1008 SFIQCPACQCNGHST-C-INNNVCEQCKNLTTGKQCQDCMPGYYGDPTNGG--QCTACTC 1063
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEK 184
+ + C+ +G G++
Sbjct: 1064 SGHANICHMHTGKCFCTT--KGIKGDQ 1088
Score = 50 (22.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C GD C+ C + G +TD
Sbjct: 80 CLCDPGWVGDQCQHCQGRFKLTEPSGYLTD 109
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 270 CVCNDSWQGPDC 281
>ZFIN|ZDB-GENE-000329-5 [details] [associations]
symbol:notch3 "notch homolog 3" species:7955 "Danio
rerio" [GO:0030154 "cell differentiation" evidence=IEA] [GO:0050793
"regulation of developmental process" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA;IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0050768
"negative regulation of neurogenesis" evidence=IEP] [GO:0035019
"somatic stem cell maintenance" evidence=IEP] [GO:0048259
"regulation of receptor-mediated endocytosis" evidence=IGI]
[GO:0048793 "pronephros development" evidence=IMP] [GO:0001889
"liver development" evidence=IGI;IMP] [GO:0001840 "neural plate
development" evidence=IGI] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=IGI] [GO:0021654 "rhombomere boundary
formation" evidence=IGI] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022331 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01986 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 ZFIN:ZDB-GENE-000329-5
GO:GO:0016021 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0001889 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0035019 PROSITE:PS00010 HSSP:P07207 GO:GO:0048259
GO:GO:0050768 GO:GO:0048793 Pfam:PF12661 GO:GO:0001840
SUPFAM:SSF90193 GO:GO:0048936 HOGENOM:HOG000234369
HOVERGEN:HBG052650 KO:K02599 InterPro:IPR024600 Pfam:PF11936
CTD:4854 GO:GO:0021654 EMBL:AF152001 IPI:IPI00498136
RefSeq:NP_571624.2 UniGene:Dr.75827 ProteinModelPortal:Q800E4
SMR:Q800E4 STRING:Q800E4 PRIDE:Q800E4 GeneID:58066 KEGG:dre:58066
InParanoid:Q800E4 NextBio:20892327 ArrayExpress:Q800E4 Bgee:Q800E4
Uniprot:Q800E4
Length = 2468
Score = 166 (63.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/188 (31%), Positives = 74/188 (39%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQC-PCPNQGPCVQLDDDQVSNL-----GN 59
ICQD C C +GY G + V C+ PC N G C Q D + G
Sbjct: 990 ICQDAMESYRCS-CPKGYTGPRCQYPVDWCRPSNPCKNGGRCRQKDASFTCDCLGGWSGR 1048
Query: 60 RTRIRIKSALGGNRTRGLALTRQT-HYQLTGYHHEPTSGGAFSRCVPCN-----CNGHAD 113
I S R RG RQT L G H T + +C P + C D
Sbjct: 1049 YCDIPGVSCEVAARQRG----RQTDELCLHGGHCVNTGNTHYCKC-PADYTGSYCESQFD 1103
Query: 114 ICDAES--GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
C+ + C+ GG C+ C GY GN E V +C+ PC N G C+ L
Sbjct: 1104 HCEEKPCLNGATCRSYMGGFTCD-CMPGYEGNNCEREVNECQSHPCQNGGTCIDLVG-HY 1161
Query: 172 VCSECPRG 179
+CS CP G
Sbjct: 1162 ICS-CPPG 1168
Score = 144 (55.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 53/183 (28%), Positives = 71/183 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLG-NRTRIRI 65
C D G C RCA G+ G E + +CK PC + G CV N T R
Sbjct: 498 CIDRPNGYEC-RCAEGFEGRLCESNIDNCKPDPC-HHGTCVDGIASYTCNCEPGYTGYRC 555
Query: 66 KSALG---GN--RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
++ L N + G + Y H TSG NC + D C S
Sbjct: 556 ENQLNECHSNPCQNGGKCVDLVNKYICQCQHG--TSG--------TNCEINFDDC--ASN 603
Query: 121 RC---ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
C IC+D C C G+ G + + +C+ PC N G CV DD+ +CP
Sbjct: 604 PCDYGICKDGINRYECV-CKPGFTGPQCKDEIDECQSNPCRNGGTCV--DDENGFHCQCP 660
Query: 178 RGY 180
G+
Sbjct: 661 EGF 663
Score = 142 (55.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 53/188 (28%), Positives = 73/188 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNLGNRTR 62
R C + GG C C GY G E + DC PC N G C ++ + S L T
Sbjct: 836 RGTCTNTLGGYVCS-CRAGYTGPNCETDINDCSPNPCLNGGSCTDGVNSFRCSCLPGFTG 894
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGY--HHEPTSGGAFSRCVPCNCNGHADICDAESG 120
R + L N + + + T Y + T F+ + C N + D
Sbjct: 895 ARCATEL--NECQSVPC--KNGGTCTDYVNSYTCTCKPGFTGLL-CETN----VPDCTES 945
Query: 121 RCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
C C D G C C G+ G+ + V +C PC N G C Q + CS C
Sbjct: 946 SCFNGGTCTDGINGFKCT-CRTGFTGDYCQYEVNECDSQPCLNGGIC-QDAMESYRCS-C 1002
Query: 177 PRGYGGEK 184
P+GY G +
Sbjct: 1003 PKGYTGPR 1010
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/183 (26%), Positives = 70/183 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDD----QVSNLGNRT 61
C+D+ G C+ C G+ G + DC PC N G C QL+ + GN
Sbjct: 685 CRDDPNGYRCD-CEPGWVGKNCDLDRNDCLPSPCQNAGTCFDQLNGFTCKCRQGFRGNLC 743
Query: 62 RIRIKSALGGN-RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCNCNGHADICDAES 119
++ I +G + + T P SG + + PC+ N C A
Sbjct: 744 QVNINECASSPCLNQGTCVDGVASF--TCLCEPPYSGPTCAELLTPCSPNP----C-ANH 796
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+ + G C C G+ G+ + +C PC N+G C V CS C G
Sbjct: 797 ASCVHTPDYLGYQCN-CQPGWQGHLCNNDINECTSNPCKNRGTCTNTLGGYV-CS-CRAG 853
Query: 180 YGG 182
Y G
Sbjct: 854 YTG 856
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/181 (26%), Positives = 63/181 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-----QVSNLGNRT 61
C D G C C GY G E + +C+ PC N G C + + Q G
Sbjct: 422 CLDRIGEFTCI-CMPGYQGKYCEVDIDECESNPCVNDGICRDMVNGFTCTCQPGFTGTMC 480
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
+I I G + + GY G C N D C G
Sbjct: 481 QIDIDECASTPCQNGAKCIDRPN----GYECRCAEGFEGRLCESNIDNCKPDPC--HHGT 534
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
C+ D C C GY G E + +C PC N G CV L + + +C +C G
Sbjct: 535 CV--DGIASYTCN-CEPGYTGYRCENQLNECHSNPCQNGGKCVDLVN-KYIC-QCQHGTS 589
Query: 182 G 182
G
Sbjct: 590 G 590
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 48/187 (25%), Positives = 68/187 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-P-NQGPCVQLDDD-----QVSNLGN 59
C D GG C C G+ G EG + +C PC P N C+QL +D + G
Sbjct: 1199 CVDRVGGYRCN-CPPGFTGERCEGDINECLSNPCNPSNSLDCIQLPNDYQCVCKPGFTGR 1257
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCNCNGHADICDAE 118
+ R S + + + GY G A S C NC ++
Sbjct: 1258 GCQSRF-SVCESQPCKNGGVCSLSGSSPPGYSCTCQLGYAGSNCERSMNCK---ELPCYN 1313
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCSECP 177
G C T G C C +G+ G + D C PC N G C + +C
Sbjct: 1314 GGSCTL--TTRGARCT-CIQGFGGPLCQHRSNDGCSSKPCHNGGLCTEETSYPFFHCQCT 1370
Query: 178 RGYGGEK 184
G+ G++
Sbjct: 1371 NGWKGKR 1377
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 48/186 (25%), Positives = 68/186 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSN-----LGNRT 61
C+ GG C+ C GY GN E V +C+ PC N G C+ L + + LG
Sbjct: 1116 CRSYMGGFTCD-CMPGYEGNNCEREVNECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLC 1174
Query: 62 RIRIKSALGGNRTRGLALTRQTHY---QLTGYHHEPTSGGAFSRCVPCNCNGHADICD-A 117
I + RG+ + ++ GY G RC ++ C+ +
Sbjct: 1175 EINEDDCATPSWPRGMPKCQNNGTCVDRVGGYRCNCPPGFTGERCEGDINECLSNPCNPS 1234
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS-EC 176
S CI N C C G+ G + + C+ PC N G C S C
Sbjct: 1235 NSLDCIQLPNDY--QCV-CKPGFTGRGCQSRFSVCESQPCKNGGVCSLSGSSPPGYSCTC 1291
Query: 177 PRGYGG 182
GY G
Sbjct: 1292 QLGYAG 1297
Score = 101 (40.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 31/99 (31%), Positives = 39/99 (39%)
Query: 94 PTSGGAFSRC----VPCNCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNAL 145
P +G A C V CN D C + C C + G C+ C RGY G
Sbjct: 346 PLNGRAICTCPAGFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQ-CGRGYTGPRC 404
Query: 146 EGAVTDCKQCPCPNQGPCVQLDD-DQVVCSECPRGYGGE 183
E + +C PC N C LD + C C GY G+
Sbjct: 405 EIDINECLSMPCQNDATC--LDRIGEFTCI-CMPGYQGK 440
Score = 98 (39.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 32/100 (32%), Positives = 38/100 (38%)
Query: 92 HEPTSGGAFSRCVPCNCNGHA---DICDAESGRC----ICQDNTGGDNCERCARGYYGNA 144
H P G C P GH DI + S C C + GG C C GY G
Sbjct: 801 HTPDYLGYQCNCQP-GWQGHLCNNDINECTSNPCKNRGTCTNTLGGYVCS-CRAGYTGPN 858
Query: 145 LEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
E + DC PC N G C + CS C G+ G +
Sbjct: 859 CETDINDCSPNPCLNGGSCTD-GVNSFRCS-CLPGFTGAR 896
Score = 80 (33.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 2 FRRCICQDNTGGD-NCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
F +C+ NT G C+ C RGY G E + +C PC N C+
Sbjct: 381 FGKCV---NTEGSFQCQ-CGRGYTGPRCEIDINECLSMPCQNDATCL 423
Score = 62 (26.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/75 (29%), Positives = 29/75 (38%)
Query: 5 CICQDNTGGDNCER----CARG--YYGNALEGAVTD--CKQCPCPNQGPCVQLDDDQVSN 56
C+C + GD+C CA + G V C +CP G LDD VSN
Sbjct: 276 CVCVNGWTGDDCSENIDDCATAVCFNGATCHDRVASFFC-ECPVGKTGLLCHLDDACVSN 334
Query: 57 LGNRTRIRIKSALGG 71
N + + L G
Sbjct: 335 PCNEGAVCDTNPLNG 349
>MGI|MGI:2147749 [details] [associations]
symbol:Atrnl1 "attractin like 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IPI] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 MGI:MGI:2147749 GO:GO:0016021 GO:GO:0005886
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 HSSP:P02468 CTD:26033 eggNOG:NOG242225
HOVERGEN:HBG004312 OMA:YTQQKVS OrthoDB:EOG4QC14F ChiTaRS:ATRNL1
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
EMBL:AY688677 EMBL:AK172967 EMBL:AK050882 EMBL:AK147492
EMBL:BC030872 EMBL:BC050020 IPI:IPI00462742 IPI:IPI00874371
IPI:IPI00895221 RefSeq:NP_852080.3 UniGene:Mm.245340
ProteinModelPortal:Q6A051 SMR:Q6A051 STRING:Q6A051
PhosphoSite:Q6A051 PaxDb:Q6A051 PRIDE:Q6A051
Ensembl:ENSMUST00000077282 GeneID:226255 KEGG:mmu:226255
UCSC:uc008iai.2 UCSC:uc008iaj.1 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 InParanoid:Q6A051 NextBio:378084 Bgee:Q6A051
Genevestigator:Q6A051 Uniprot:Q6A051
Length = 1378
Score = 151 (58.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 47/152 (30%), Positives = 64/152 (42%)
Query: 7 CQD--NTGGDNC-ERCARG---YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSNLG 58
C D NTG C E +RG G V D CP + +Q Q + G
Sbjct: 960 CNDPSNTGRGYCIEGSSRGPMKLAGVHNSDVVLDTSLCPKEKNYEWSFIQCPACQCN--G 1017
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ T I + + L RQ + GY+ +PT+GG +C C C GHA++C
Sbjct: 1018 HSTCINNNVC---EQCKNLTTGRQCQECMPGYYGDPTNGG---QCTACTCGGHANVCHLH 1071
Query: 119 SGRCICQDN-TGGDNCERC--ARGYYGNALEG 147
+G+C C GD C+ C Y GN L G
Sbjct: 1072 TGKCFCTTKGIKGDQCQLCDSENRYVGNPLRG 1103
Score = 117 (46.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 26/87 (29%), Positives = 39/87 (44%)
Query: 99 AFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
+F +C C CNGH+ C + C C++ T G C+ C GYYG+ G C C C
Sbjct: 1006 SFIQCPACQCNGHST-C-INNNVCEQCKNLTTGRQCQECMPGYYGDPTNGG--QCTACTC 1061
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEK 184
L + C+ +G G++
Sbjct: 1062 GGHANVCHLHTGKCFCTT--KGIKGDQ 1086
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C GD C+ C + G +TD
Sbjct: 78 CLCDPGWVGDQCQHCQGRFKLTEPSGYLTD 107
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 268 CVCNDSWQGPDC 279
>UNIPROTKB|Q4LDE5 [details] [associations]
symbol:SVEP1 "Sushi, von Willebrand factor type A, EGF and
pentraxin domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002035 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00092
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50234
SMART:SM00179 SMART:SM00181 SMART:SM00327 InterPro:IPR000152
GO:GO:0005737 GO:GO:0005576 GO:GO:0016020 GO:GO:0007155
GO:GO:0005509 GO:GO:0003682 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 PROSITE:PS00010
InterPro:IPR000436 Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535
PROSITE:PS50923 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF12661
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699 HSSP:Q9UCV4
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 EMBL:AJ619977
EMBL:AY916667 EMBL:AK023591 EMBL:AK075235 EMBL:AK027870
EMBL:AL158158 EMBL:AL592463 EMBL:AL354982 EMBL:BC030816
EMBL:BX537918 EMBL:BX538049 EMBL:AF308289 IPI:IPI00885181
IPI:IPI00939415 IPI:IPI00965068 IPI:IPI01012873 RefSeq:NP_699197.3
UniGene:Hs.522334 UniGene:Hs.726867 ProteinModelPortal:Q4LDE5
SMR:Q4LDE5 IntAct:Q4LDE5 MINT:MINT-1197821 STRING:Q4LDE5
PhosphoSite:Q4LDE5 DMDM:296452942 PaxDb:Q4LDE5 PRIDE:Q4LDE5
Ensembl:ENST00000297826 Ensembl:ENST00000374461
Ensembl:ENST00000374469 Ensembl:ENST00000401783 GeneID:79987
KEGG:hsa:79987 UCSC:uc004beu.2 UCSC:uc010mty.3 UCSC:uc010mtz.3
UCSC:uc010mua.1 CTD:79987 GeneCards:GC09M113127 H-InvDB:HIX0008277
H-InvDB:HIX0035094 HGNC:HGNC:15985 HPA:HPA020610 HPA:HPA021520
MIM:611691 neXtProt:NX_Q4LDE5 PharmGKB:PA25971 HOVERGEN:HBG108523
OMA:IDCRLED GenomeRNAi:79987 NextBio:70034 ArrayExpress:Q4LDE5
Bgee:Q4LDE5 Genevestigator:Q4LDE5 Uniprot:Q4LDE5
Length = 3571
Score = 167 (63.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 52/185 (28%), Positives = 80/185 (43%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
+C+D G CE C GY G E + +C PC N+G CV D V+ G R +
Sbjct: 1245 VCKDLVGEFICE-CPSGYTGQRCEENINECSSSPCLNKGICV----DGVA--GYRCTC-V 1296
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAESGR 121
K +G + + Q++ L E GG +C P C + D C ++ +
Sbjct: 1297 KGFVGLHCETEVNEC-QSNPCLNNAVCEDQVGGFLCKCPPGFLGTRCGKNVDECLSQPCK 1355
Query: 122 --CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D C CA G+ G+ E + +C+ PC NQ CV D+ +C G
Sbjct: 1356 NGATCKDGANSFRC-LCAAGFTGSHCELNINECQSNPCRNQATCV--DELNSYSCKCQPG 1412
Query: 180 YGGEK 184
+ G++
Sbjct: 1413 FSGKR 1417
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 54/190 (28%), Positives = 76/190 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+CIC+ NT G +C+ CA Y E G+ +C+ C C D +
Sbjct: 292 KCICKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPNECRTCKCNGHADACHFDINVWEAS 351
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHE---PTSGGAFSRCVPCNCN--G 110
GNR+ GG T H Q G++ + P S A C C+C+ G
Sbjct: 352 GNRS--------GGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFS--APDACKSCSCHPVG 401
Query: 111 HADI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-----P 158
A + CD +G C C+ G +CERC GY+G G C+ C C P
Sbjct: 402 SAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYG----CRPCDCAGSCDP 457
Query: 159 NQGPCVQLDD 168
+ G C+ D
Sbjct: 458 HTGDCLSSTD 467
>UNIPROTKB|E2RM39 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:AAEX03000913
EMBL:AAEX03000914 Ensembl:ENSCAFT00000007776 Uniprot:E2RM39
Length = 2787
Score = 155 (59.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 56/180 (31%), Positives = 70/180 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNAL----EGAVTDCKQ--CPCPNQGPCVQLDDDQVSNL 57
R C + C C RGY G+ + + DC C P CV D S+L
Sbjct: 1087 RATCLNTPLSYECH-CQRGYQGDGITYCNRTCLEDCGHGVCSGPPDFTCV-CDLGWTSDL 1144
Query: 58 GNRTRI------RIKSALGGN-----RTRGLALTRQTHYQLTGYHHEPTSGGAFSR---- 102
T R G N R RG + G H E G+F
Sbjct: 1145 PPPTPAPGPPAPRCSRDCGCNFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGS 1204
Query: 103 --CVPCNCNGHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQC 155
C PC CNGH D CD SG C CQD+T G +C+ C+ GYYG+ G C ++C
Sbjct: 1205 GGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQFCSPGYYGDPRAGG--SCFREC 1262
Score = 126 (49.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 37/140 (26%), Positives = 63/140 (45%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-NQGPCVQLDDDQVSNLG-NRT 61
+C+++T G +CE+C + G+A+ G C+ C C N CV + +++ +
Sbjct: 2214 LCRNHTKGSHCEQCLPLFVGSAVGGGT--CRPCHAFCRGNSHVCVSRKELEMARKEPEKY 2271
Query: 62 RI---RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGHADIC 115
+ I++ + + A+ G E G F +C C CNGHAD C
Sbjct: 2272 PLDPEEIENWVTEGPSEDEAVCVNCQNNSYGDKCESCLHGYFLLDGKCTKCQCNGHADTC 2331
Query: 116 DAESGR-CICQDNTGGDNCE 134
+ + G C CQ+NT C+
Sbjct: 2332 NEQDGTGCPCQNNTETGTCQ 2351
Score = 42 (19.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
CIC + GG +C
Sbjct: 1468 CICAEGFGGPDC 1479
Score = 40 (19.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 146 EGAVTDCKQCP-CPNQGPCV 164
E + CK C CP +G C+
Sbjct: 1890 EASAPRCKWCTNCP-EGACI 1908
>UNIPROTKB|Q9HB63 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0016322 EMBL:CH471054
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AF278532 EMBL:AF297711 EMBL:AF119916 EMBL:AY330211
EMBL:AL137540 EMBL:BC013591 EMBL:BC136798 EMBL:BC136799
EMBL:AL833767 EMBL:AK024691 IPI:IPI00328091 IPI:IPI00385236
IPI:IPI00472613 PIR:T46383 RefSeq:NP_067052.2 UniGene:Hs.201034
ProteinModelPortal:Q9HB63 SMR:Q9HB63 DIP:DIP-46274N IntAct:Q9HB63
MINT:MINT-1463888 STRING:Q9HB63 PhosphoSite:Q9HB63 DMDM:76789662
PaxDb:Q9HB63 PRIDE:Q9HB63 Ensembl:ENST00000343702
Ensembl:ENST00000344911 Ensembl:ENST00000538383
Ensembl:ENST00000553059 GeneID:59277 KEGG:hsa:59277 UCSC:uc001tei.3
UCSC:uc009ztf.3 CTD:59277 GeneCards:GC12M095984 HGNC:HGNC:13658
HPA:HPA049832 MIM:610401 neXtProt:NX_Q9HB63 PharmGKB:PA31815
eggNOG:NOG329215 HOVERGEN:HBG082019 InParanoid:Q9HB63 KO:K06845
OMA:RSQDFGK PhylomeDB:Q9HB63 ChiTaRS:NTN4 GenomeRNAi:59277
NextBio:65162 ArrayExpress:Q9HB63 Bgee:Q9HB63 CleanEx:HS_NTN4
Genevestigator:Q9HB63 GermOnline:ENSG00000074527 GO:GO:0060668
Uniprot:Q9HB63
Length = 628
Score = 157 (60.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 52/189 (27%), Positives = 74/189 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT G +C+ CA Y E GA +C+ C C D +
Sbjct: 292 KCMCKHNTAGSHCQHCAPLYNDRPWEAADGKTGAPNECRTCKCNGHADTCHFDVNVWEAS 351
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHE---PTSGGAFSRCVPCNCN--GHA 112
GNR+ + T G R G++ + P S A C PC+C+ G A
Sbjct: 352 GNRSGGVCDDCQ--HNTEGQYCQRCK----PGFYRDLRRPFS--APDACKPCSCHPVGSA 403
Query: 113 DI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC-----PNQ 160
+ CD +G C C+ G C+RC GY+G G C+ C C P
Sbjct: 404 VLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYG----CRPCDCAGSCDPIT 459
Query: 161 GPCVQLDDD 169
G C+ D
Sbjct: 460 GDCISSHTD 468
>UNIPROTKB|Q04721 [details] [associations]
symbol:NOTCH2 "Neurogenic locus notch homolog protein 2"
species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0009986 "cell surface" evidence=IDA] [GO:0004872 "receptor
activity" evidence=NAS] [GO:0009887 "organ morphogenesis"
evidence=IEP] [GO:0043066 "negative regulation of apoptotic
process" evidence=TAS] [GO:0006917 "induction of apoptosis"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=TAS]
[GO:0007050 "cell cycle arrest" evidence=IDA] [GO:0016049 "cell
growth" evidence=IDA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0007399
"nervous system development" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0046849 "bone remodeling"
evidence=IMP] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0007220 "Notch receptor processing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0003184 "pulmonary
valve morphogenesis" evidence=IMP] [GO:0060413 "atrial septum
morphogenesis" evidence=IMP] [GO:0061314 "Notch signaling involved
in heart development" evidence=IC] Reactome:REACT_2001
Reactome:REACT_691 Reactome:REACT_71 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 Reactome:REACT_111102
GO:GO:0043066 GO:GO:0005576 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0009986 GO:GO:0000139 GO:GO:0005887
GO:GO:0006917 GO:GO:0006355 GO:GO:0002437 GO:GO:0005789
eggNOG:COG0666 GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005509 GO:GO:0004872 GO:GO:0007050 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030326 GO:GO:0007368 PROSITE:PS01186
GO:GO:0007220 GO:GO:0042246 EMBL:AL359752 GO:GO:0030097
PROSITE:PS00010 GO:GO:0006959 GO:GO:0006367 GO:GO:0001709
GO:GO:0046579 GO:GO:0019827 Reactome:REACT_2155 GO:GO:0060413
GO:GO:0002011 GO:GO:0061314 GO:GO:0072602 SUPFAM:SSF90193
GO:GO:0003184 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 EMBL:AF308601 EMBL:AF315356
EMBL:AL512503 EMBL:AL596222 EMBL:U77493 IPI:IPI00297655
RefSeq:NP_001186930.1 RefSeq:NP_077719.2 UniGene:Hs.487360 PDB:2OO4
PDBsum:2OO4 ProteinModelPortal:Q04721 SMR:Q04721 IntAct:Q04721
MINT:MINT-1187009 STRING:Q04721 PhosphoSite:Q04721 DMDM:143811429
PaxDb:Q04721 PRIDE:Q04721 Ensembl:ENST00000256646
Ensembl:ENST00000581899 GeneID:4853 KEGG:hsa:4853 UCSC:uc001eik.3
CTD:4853 GeneCards:GC01M120454 HGNC:HGNC:7882 MIM:102500 MIM:600275
MIM:610205 neXtProt:NX_Q04721 Orphanet:955 Orphanet:261629
PharmGKB:PA31684 InParanoid:Q04721 OrthoDB:EOG4Q58NH
PhylomeDB:Q04721 ChiTaRS:NOTCH2 EvolutionaryTrace:Q04721
GenomeRNAi:4853 NextBio:18692 ArrayExpress:Q04721 Bgee:Q04721
CleanEx:HS_NOTCH2 Genevestigator:Q04721 GermOnline:ENSG00000134250
InterPro:IPR022336 PRINTS:PR01985 Uniprot:Q04721
Length = 2471
Score = 153 (58.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 53/182 (29%), Positives = 70/182 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D GG CE C GY G E V +C+ PC N G C+ L + + TR +
Sbjct: 1164 CSDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLC 1222
Query: 67 SALGGNRTRGLALTR--QTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCIC 124
+ RG Q ++ GY G A RC ++ C +E G C
Sbjct: 1223 EENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSE-GSLDC 1281
Query: 125 QDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQVVCSECPRGYGG 182
T C C + G E V C Q PC N G C + D +C CP G+ G
Sbjct: 1282 IQLTNDYLCV-CRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFIC-RCPPGFSG 1339
Query: 183 EK 184
+
Sbjct: 1340 AR 1341
Score = 144 (55.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 54/189 (28%), Positives = 74/189 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD-DDQV---SN-LGNRT 61
C D G C C GY G + V C + PC N+G CVQ + Q S G
Sbjct: 1040 CVDGLGTYRCS-CPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYC 1098
Query: 62 RI-RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG---HADICDA 117
+ + + +R RG+ + + + T + +C P G + +
Sbjct: 1099 DVPNVSCDIAASR-RGVLVEHLCQHSGVCINAGNTH---YCQC-PLGYTGSYCEEQLDEC 1153
Query: 118 ESGRC----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
S C C D GG CE C GY G E V +C+ PC N G C+ L + C
Sbjct: 1154 ASNPCQHGATCSDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVN-HFKC 1211
Query: 174 SECPRGYGG 182
S CP G G
Sbjct: 1212 S-CPPGTRG 1219
Score = 112 (44.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 32/95 (33%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 440 FHCECLKGYAGPRCEMDINEC--HSDPCQNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 493
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
+ +C+ PC N G CV ++ C CP G+ G
Sbjct: 494 EINECQSNPCVNNGQCVD-KVNRFQCL-CPPGFTG 526
Score = 103 (41.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
C+ H C E G C+ D G C C GY G + V C + PC N+G CVQ
Sbjct: 1029 CSSHP--CLNE-GTCV--DGLGTYRCS-CPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKK 1082
Query: 168 DDQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1083 AESQ-CL-CPSGWAG 1095
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G E + +C PC + G C Q
Sbjct: 532 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGVLCEENIDNCDPDPC-HHGQC-QDGI 588
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 589 DSYTCI-CNPGYMG 601
Score = 88 (36.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 23/76 (30%), Positives = 30/76 (39%)
Query: 108 CNGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C + D CD + CQD C C GY G + +C PC N G C+ L
Sbjct: 567 CEENIDNCDPDPCHHGQCQDGIDSYTCI-CNPGYMGAICSDQIDECYSSPCLNDGRCIDL 625
Query: 167 DDDQVVCSECPRGYGG 182
+ C+ C G G
Sbjct: 626 VNGYQ-CN-CQPGTSG 639
Score = 87 (35.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
+C + G CE C G+ G E + DC PC N G C +D C G+ G
Sbjct: 887 LCHNTQGSYMCE-CPPGFSGMDCEEDIDDCLANPCQNGGSC--MDGVNTFSCLCLPGFTG 943
Query: 183 EK 184
+K
Sbjct: 944 DK 945
Score = 87 (35.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
+C + + C S G C+ D +C C G+ G+ + +C PC N+G
Sbjct: 983 HCENNINECTESSCFNGGTCV--DGINSFSC-LCPVGFTGSFCLHEINECSSHPCLNEGT 1039
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
CV CS CP GY G+
Sbjct: 1040 CVD-GLGTYRCS-CPLGYTGK 1058
Score = 82 (33.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E + +C+ PC N G CV
Sbjct: 471 CLDKIGGFTC-LCMPGFKGVHCELEINECQSNPCVNNGQCV 510
Score = 62 (26.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 7 CQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ TG E C G+ G+ E + DC C N G CV
Sbjct: 236 CRQ-TGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCV 276
Score = 39 (18.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 167 DDDQVVCSECPRGYGGEKMSPG 188
D V S P G GG + PG
Sbjct: 2435 DWSDVTTSPTPGGAGGGQRGPG 2456
>UNIPROTKB|I3LNT3 [details] [associations]
symbol:DLL1 "Delta-like protein" species:9823 "Sus scrofa"
[GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
[GO:0072070 "loop of Henle development" evidence=IEA] [GO:0072014
"proximal tubule development" evidence=IEA] [GO:0070986 "left/right
axis specification" evidence=IEA] [GO:0048839 "inner ear
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0045608 "negative regulation of
auditory receptor cell differentiation" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0007386 "compartment
pattern specification" evidence=IEA] [GO:0007267 "cell-cell
signaling" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA] [GO:0001947
"heart looping" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07657
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0031410 GO:GO:0007219 GO:GO:0005509
GO:GO:0007267 GO:GO:0045747 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007368 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0048839
GO:GO:0072014 GO:GO:0045638 GO:GO:0001757
GeneTree:ENSGT00690000101660 OMA:YCDQCIR GO:GO:0007386
GO:GO:0072070 GO:GO:0045608 GO:GO:0097150 EMBL:FP339615
Ensembl:ENSSSCT00000024788 Uniprot:I3LNT3
Length = 722
Score = 144 (55.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 58/182 (31%), Positives = 68/182 (37%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRIRIK 66
NTG G C GY G E V +CK PC N G C L++ G RI
Sbjct: 306 NTGQGSYTCSCRPGYTGANCETEVDECKASPCRNGGSCTDLENSFSCTCPPGFYGRICEL 365
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE--SGRCIC 124
SA+ R + GY GG FS NC D C + S C
Sbjct: 366 SAMACADGPCFNGGRCSDNPEGGYTCR-CPGG-FSGF---NCEKKMDSCTSSPCSNGAQC 420
Query: 125 QDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
D C RC G+ G E V DC PC N G C ++ C+ CP GY G
Sbjct: 421 VDLGDAYLC-RCRAGFSGRHCEDNVDDCASSPCANGGACRD-GVNEYSCT-CPPGYTGRN 477
Query: 185 MS 186
S
Sbjct: 478 CS 479
Score = 118 (46.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 49/183 (26%), Positives = 66/183 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D +C C G+YG E + C PC N G C D+ + G T R
Sbjct: 343 CTDLENSFSCT-CPPGFYGRICELSAMACADGPCFNGGRCS--DNPE----GGYT-CRCP 394
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF-SRCVPCNCNGHAD--ICDAESGRCI 123
G + T + G A+ RC H + + D S C
Sbjct: 395 GGFSGFNCEK-KMDSCTSSPCSNGAQCVDLGDAYLCRCRAGFSGRHCEDNVDDCASSPCA 453
Query: 124 ----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D +C C GY G V+ C+ PC N C + + +C EC RG
Sbjct: 454 NGGACRDGVNEYSCT-CPPGYTGRNCSAPVSRCEHSPCHNGATCHERAL-RYLC-ECARG 510
Query: 180 YGG 182
YGG
Sbjct: 511 YGG 513
Score = 36 (17.7 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 4 RCICQDNTGGDNCER 18
+C CQ+ GG C +
Sbjct: 273 QCNCQEGWGGLFCNQ 287
>UNIPROTKB|F1RGK2 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:FP102452
Ensembl:ENSSSCT00000003355 Uniprot:F1RGK2
Length = 2789
Score = 155 (59.6 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 56/180 (31%), Positives = 70/180 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNAL----EGAVTDCKQ--CPCPNQGPCVQLDDDQVSNL 57
R C + C C RGY G+ + + DC C P CV D S+L
Sbjct: 1088 RATCLNTPLSYECH-CQRGYQGDGITYCNRTCLEDCGHGVCSGPPDFTCV-CDLGWTSDL 1145
Query: 58 GNRTRI------RIKSALGGN-----RTRGLALTRQTHYQLTGYHHEPTSGGAFSR---- 102
T R G N R RG + G H E G+F
Sbjct: 1146 PLPTPAPGPPAPRCSRDCGCNFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGS 1205
Query: 103 --CVPCNCNGHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQC 155
C PC CNGH D CD SG C CQD+T G +C+ C+ GYYG+ G C ++C
Sbjct: 1206 GGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGG--SCFREC 1263
Score = 127 (49.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/140 (25%), Positives = 63/140 (45%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-NQGPCVQLDDDQVSNLG-NRT 61
+C ++T G +CE+C + G+A+ G C+ C C N C+ + +++ +
Sbjct: 2216 LCHNHTKGSHCEQCLPLFVGSAVGGGT--CRPCHAFCRGNSHVCLSRKELEMARREPEKY 2273
Query: 62 RI---RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGHADIC 115
+ +I++ + + A+ G E G F +C C CNGHAD C
Sbjct: 2274 SLDPDKIENWVSEGPSEDEAVCVNCQNNSYGDKCESCLHGYFLLEGKCTKCQCNGHADTC 2333
Query: 116 DAESGR-CICQDNTGGDNCE 134
+ + G C CQ+NT C+
Sbjct: 2334 NEQDGTGCPCQNNTETGTCQ 2353
Score = 42 (19.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
CIC + GG +C
Sbjct: 1469 CICAEGFGGPDC 1480
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 146 EGAVTDCKQCP-CPNQGPCV 164
E CK C CP +G C+
Sbjct: 1892 EAPAPRCKWCTNCP-EGACI 1910
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 159 NQGPCVQLDDDQVVCSECPRGYGGEK 184
++GP +D+ VC C G+K
Sbjct: 2285 SEGP----SEDEAVCVNCQNNSYGDK 2306
>RGD|1588987 [details] [associations]
symbol:Svep1 "sushi, von Willebrand factor type A, EGF and
pentraxin domain containing 1" species:10116 "Rattus norvegicus"
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002035 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00092
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50234
SMART:SM00179 SMART:SM00181 SMART:SM00327 InterPro:IPR000152
RGD:1588987 GO:GO:0005737 GO:GO:0005576 GO:GO:0016020 GO:GO:0007155
GO:GO:0005509 GO:GO:0003682 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 PROSITE:PS00010
InterPro:IPR000436 Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535
PROSITE:PS50923 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF12661
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 HOVERGEN:HBG108523
HOGENOM:HOG000154457 OrthoDB:EOG4CJVG6 EMBL:AABR03040659
EMBL:AABR03041327 EMBL:AABR03041522 EMBL:AABR03042206
EMBL:AABR03044351 EMBL:AABR03044745 EMBL:AABR03045322
IPI:IPI00559054 ProteinModelPortal:P0C6B8 PRIDE:P0C6B8
UCSC:RGD:1588987 ArrayExpress:P0C6B8 Genevestigator:P0C6B8
Uniprot:P0C6B8
Length = 3564
Score = 164 (62.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 49/185 (26%), Positives = 73/185 (39%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
IC+D GG CE C+ GY G E + +C PC N+G C D +++ R
Sbjct: 1240 ICRDKVGGFTCE-CSSGYTGQICEENINECSSSPCLNKGTCT----DGLASY----RCTC 1290
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAE--S 119
S G Q+ L + GG +C P C + D C ++
Sbjct: 1291 VSGYVGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQ 1350
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D C+ C G+ G E + +C+ PC NQ CV D+ +C G
Sbjct: 1351 NGATCKDGANSFRCQ-CPAGFTGPHCELNINECQSNPCRNQATCV--DELNSYSCKCRPG 1407
Query: 180 YGGEK 184
+ G +
Sbjct: 1408 FSGRR 1412
Score = 125 (49.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 47/181 (25%), Positives = 66/181 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ G C C GY G E + +C PC N G C + +I
Sbjct: 1203 CQQLGRGYVC-LCPPGYTGLKCETDIDECSSLPCLNGGICRDKVGGFTCECSSGYTGQIC 1261
Query: 67 SALGGNRTRGLALTRQTHYQ-LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC--- 122
+ L + T L Y SG V +C D+ + +S C
Sbjct: 1262 EENINECSSSPCLNKGTCTDGLASYRCTCVSG-----YVGVHCE--TDVNECQSSPCLNN 1314
Query: 123 -ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
+C+D GG +C +C G+ G E V +C PC N C + C +CP G+
Sbjct: 1315 AVCKDQVGGFSC-KCPPGFLGTRCEKNVDECLSQPCQNGATCKD-GANSFRC-QCPAGFT 1371
Query: 182 G 182
G
Sbjct: 1372 G 1372
Score = 43 (20.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 6 ICQDNTGGDNCE-RCARGY 23
IC ++ G NC C GY
Sbjct: 739 ICAQDSAGVNCSLTCREGY 757
>UNIPROTKB|P0C6B8 [details] [associations]
symbol:Svep1 "Sushi, von Willebrand factor type A, EGF and
pentraxin domain-containing protein 1" species:10116 "Rattus
norvegicus" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002035 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00092 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50234 SMART:SM00179 SMART:SM00181
SMART:SM00327 InterPro:IPR000152 RGD:1588987 GO:GO:0005737
GO:GO:0005576 GO:GO:0016020 GO:GO:0007155 GO:GO:0005509
GO:GO:0003682 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 PROSITE:PS00010
InterPro:IPR000436 Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535
PROSITE:PS50923 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF12661
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 HOVERGEN:HBG108523
HOGENOM:HOG000154457 OrthoDB:EOG4CJVG6 EMBL:AABR03040659
EMBL:AABR03041327 EMBL:AABR03041522 EMBL:AABR03042206
EMBL:AABR03044351 EMBL:AABR03044745 EMBL:AABR03045322
IPI:IPI00559054 ProteinModelPortal:P0C6B8 PRIDE:P0C6B8
UCSC:RGD:1588987 ArrayExpress:P0C6B8 Genevestigator:P0C6B8
Uniprot:P0C6B8
Length = 3564
Score = 164 (62.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 49/185 (26%), Positives = 73/185 (39%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
IC+D GG CE C+ GY G E + +C PC N+G C D +++ R
Sbjct: 1240 ICRDKVGGFTCE-CSSGYTGQICEENINECSSSPCLNKGTCT----DGLASY----RCTC 1290
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAE--S 119
S G Q+ L + GG +C P C + D C ++
Sbjct: 1291 VSGYVGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQ 1350
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D C+ C G+ G E + +C+ PC NQ CV D+ +C G
Sbjct: 1351 NGATCKDGANSFRCQ-CPAGFTGPHCELNINECQSNPCRNQATCV--DELNSYSCKCRPG 1407
Query: 180 YGGEK 184
+ G +
Sbjct: 1408 FSGRR 1412
Score = 125 (49.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 47/181 (25%), Positives = 66/181 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ G C C GY G E + +C PC N G C + +I
Sbjct: 1203 CQQLGRGYVC-LCPPGYTGLKCETDIDECSSLPCLNGGICRDKVGGFTCECSSGYTGQIC 1261
Query: 67 SALGGNRTRGLALTRQTHYQ-LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC--- 122
+ L + T L Y SG V +C D+ + +S C
Sbjct: 1262 EENINECSSSPCLNKGTCTDGLASYRCTCVSG-----YVGVHCE--TDVNECQSSPCLNN 1314
Query: 123 -ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
+C+D GG +C +C G+ G E V +C PC N C + C +CP G+
Sbjct: 1315 AVCKDQVGGFSC-KCPPGFLGTRCEKNVDECLSQPCQNGATCKD-GANSFRC-QCPAGFT 1371
Query: 182 G 182
G
Sbjct: 1372 G 1372
Score = 43 (20.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 6 ICQDNTGGDNCE-RCARGY 23
IC ++ G NC C GY
Sbjct: 739 ICAQDSAGVNCSLTCREGY 757
>MGI|MGI:1928849 [details] [associations]
symbol:Svep1 "sushi, von Willebrand factor type A, EGF and
pentraxin domain containing 1" species:10090 "Mus musculus"
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002035
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00092 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50234 SMART:SM00179
SMART:SM00181 SMART:SM00327 InterPro:IPR000152 MGI:MGI:1928849
GO:GO:0005737 GO:GO:0005576 GO:GO:0016020 GO:GO:0007155
GO:GO:0005509 GO:GO:0003682 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793 PROSITE:PS00010
InterPro:IPR000436 Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535
PROSITE:PS50923 InterPro:IPR009030 SUPFAM:SSF57184
GeneTree:ENSGT00680000099691 InterPro:IPR001759 Pfam:PF00354
PRINTS:PR00895 Gene3D:2.40.155.10 InterPro:IPR023413
InterPro:IPR011641 Pfam:PF07699 InterPro:IPR003410 Pfam:PF02494
PROSITE:PS50825 CTD:79987 HOVERGEN:HBG108523 OMA:IDCRLED
EMBL:AF206329 EMBL:AK052699 EMBL:AK014693 EMBL:AK035333
EMBL:AL929406 EMBL:AL805969 EMBL:BC008135 IPI:IPI00112858
IPI:IPI00885501 RefSeq:NP_073725.2 UniGene:Mm.261024
ProteinModelPortal:A2AVA0 SMR:A2AVA0 PhosphoSite:A2AVA0
PaxDb:A2AVA0 PRIDE:A2AVA0 Ensembl:ENSMUST00000042850 GeneID:64817
KEGG:mmu:64817 UCSC:uc008syr.1 UCSC:uc008sys.1 HOGENOM:HOG000154457
InParanoid:A2AVA0 OrthoDB:EOG4CJVG6 ChiTaRS:SVEP1 NextBio:320187
Bgee:A2AVA0 Genevestigator:A2AVA0 Uniprot:A2AVA0
Length = 3567
Score = 164 (62.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 48/185 (25%), Positives = 74/185 (40%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
IC+D GG CE C+ GY G E + +C PC N+G C L + +
Sbjct: 1244 ICRDQVGGFTCE-CSLGYSGQICEENINECISSPCLNKGTCTD-------GLASYRCTCV 1295
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAE--S 119
K +G + + Q+ L + GG +C P C + D C ++
Sbjct: 1296 KGYMGVHCETDVNEC-QSSPCLNNAVCKDQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQ 1354
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D C+ C G+ G E + +C+ PC NQ CV D+ +C G
Sbjct: 1355 NGATCKDGANSFRCQ-CPAGFTGTHCELNINECQSNPCRNQATCV--DELNSYSCKCQPG 1411
Query: 180 YGGEK 184
+ G +
Sbjct: 1412 FSGHR 1416
Score = 123 (48.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 52/188 (27%), Positives = 73/188 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ G C C GY G E + +C PC N G C DQV G T +
Sbjct: 1207 CQQLGRGYVC-LCPPGYTGLKCETDIDECSSLPCLNGGIC----RDQV---GGFT---CE 1255
Query: 67 SALGGNRTRGLALTRQTHYQLTG---YHHEPTSGGAFSRCVPC-----NCNGHADICDAE 118
+LG + G + ++ T G A RC C + D+ + +
Sbjct: 1256 CSLGYS---GQICEENINECISSPCLNKGTCTDGLASYRCT-CVKGYMGVHCETDVNECQ 1311
Query: 119 SGRC----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
S C +C+D GG +C +C G+ G E V +C PC N C + C
Sbjct: 1312 SSPCLNNAVCKDQVGGFSC-KCPPGFLGTRCEKNVDECLSQPCQNGATCKD-GANSFRC- 1368
Query: 175 ECPRGYGG 182
+CP G+ G
Sbjct: 1369 QCPAGFTG 1376
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 6 ICQDNTGGDNCE-RCARGY 23
IC ++ G NC C GY
Sbjct: 739 ICAQDSAGVNCSLSCKEGY 757
>UNIPROTKB|Q7Z7M0 [details] [associations]
symbol:MEGF8 "Multiple epidermal growth factor-like domains
protein 8" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005198 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AB011541 EMBL:AC011497
EMBL:AC024078 EMBL:BC153880 EMBL:AY280362 IPI:IPI00027310
IPI:IPI00607580 PIR:T00209 RefSeq:NP_001258867.1 RefSeq:NP_001401.2
UniGene:Hs.132483 ProteinModelPortal:Q7Z7M0 SMR:Q7Z7M0
IntAct:Q7Z7M0 MINT:MINT-2808456 STRING:Q7Z7M0 PhosphoSite:Q7Z7M0
DMDM:218511690 PaxDb:Q7Z7M0 PRIDE:Q7Z7M0 Ensembl:ENST00000251268
Ensembl:ENST00000334370 GeneID:1954 KEGG:hsa:1954 UCSC:uc002otl.4
UCSC:uc002otm.4 CTD:1954 GeneCards:GC19P042829 HGNC:HGNC:3233
HPA:HPA049248 MIM:604267 neXtProt:NX_Q7Z7M0 PharmGKB:PA27666
eggNOG:NOG304142 HOGENOM:HOG000113554 HOVERGEN:HBG108128
OMA:GHSMVFH ChiTaRS:MEGF8 GenomeRNAi:1954 NextBio:7919
ArrayExpress:Q7Z7M0 Bgee:Q7Z7M0 CleanEx:HS_MEGF8
Genevestigator:Q7Z7M0 GermOnline:ENSG00000105429 Uniprot:Q7Z7M0
Length = 2845
Score = 153 (58.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 57/180 (31%), Positives = 72/180 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGA----VTDCKQ--CPCPNQGPCVQLDDDQVSNL 57
R C + C C RGY G+ + + DC C P CV D S+L
Sbjct: 1088 RATCLNTPLSYECH-CQRGYQGDGISHCNRTCLEDCGHGVCSGPPDFTCV-CDLGWTSDL 1145
Query: 58 GNRTRI------RIKSALGGN-----RTRGLALTRQTHYQLTGYHHEPTSGGAF-----S 101
T R G + R RG + G H E G+F S
Sbjct: 1146 PPPTPAPGPPAPRCSRDCGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGS 1205
Query: 102 R-CVPCNCNGHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQC 155
R C PC CNGH D CD SG C CQD+T G +C+ C+ GYYG+ G C ++C
Sbjct: 1206 RGCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGG--SCFREC 1263
Score = 135 (52.6 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 39/141 (27%), Positives = 63/141 (44%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-NQGPCVQLDDDQVSNLGNRTR 62
+C+++T G +CE+C + G+A+ G C+ C C N C+ + Q+S G +
Sbjct: 2272 LCRNHTKGSHCEQCLPLFVGSAVGGGT--CRPCHAFCRGNSHICISRKELQMSK-GEPKK 2328
Query: 63 I-----RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGHADI 114
I++ + + A+ G E G F +C C CNGHAD
Sbjct: 2329 YSLDPEEIENWVTEGPSEDEAVCVNCQNNSYGEKCESCLQGYFLLDGKCTKCQCNGHADT 2388
Query: 115 CDAESGR-CICQDNTGGDNCE 134
C+ + G C CQ+NT C+
Sbjct: 2389 CNEQDGTGCPCQNNTETGTCQ 2409
Score = 42 (19.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
CIC + GG +C
Sbjct: 1469 CICAEGFGGPDC 1480
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 146 EGAVTDCKQCP-CPNQGPCV 164
E + CK C CP +G C+
Sbjct: 1948 EASTPRCKWCTNCP-EGACI 1966
>UNIPROTKB|F1PNN6 [details] [associations]
symbol:DLL1 "Delta-like protein" species:9615 "Canis lupus
familiaris" [GO:0097150 "neuronal stem cell maintenance"
evidence=IEA] [GO:0072070 "loop of Henle development" evidence=IEA]
[GO:0072014 "proximal tubule development" evidence=IEA] [GO:0070986
"left/right axis specification" evidence=IEA] [GO:0048839 "inner
ear development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0045608 "negative regulation of
auditory receptor cell differentiation" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0007386 "compartment
pattern specification" evidence=IEA] [GO:0007267 "cell-cell
signaling" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA] [GO:0001947
"heart looping" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07657
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0031410 GO:GO:0007219 GO:GO:0005509
GO:GO:0007267 GO:GO:0045747 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007368 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0048839
GO:GO:0072014 GO:GO:0045638 GO:GO:0001757
GeneTree:ENSGT00690000101660 OMA:YCDQCIR GO:GO:0007386
GO:GO:0072070 GO:GO:0045608 GO:GO:0097150 EMBL:AAEX03008662
Ensembl:ENSCAFT00000006563 Uniprot:F1PNN6
Length = 689
Score = 143 (55.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 50/183 (27%), Positives = 68/183 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D G +C C G+YG E + C PC N G C D+ R +
Sbjct: 304 CTDLENGYSCT-CPPGFYGRICELSAMACADGPCFNGGRC---SDNPEGGYTCRCPVGFS 359
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA---DICDAESGRCI 123
G N + + R + G RC P +G ++ D S C
Sbjct: 360 ---GFNCEKKVDSCRSSPCS-NGAQCVALGDAYLCRC-PAGFSGRQCEDNVDDCASSPCA 414
Query: 124 ----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D +C C GY G V+ C+ PC N C + D + +C EC RG
Sbjct: 415 NGGTCRDGVNEYSCT-CPPGYTGRNCSAPVSRCEHAPCHNGATCHERDR-RYLC-ECARG 471
Query: 180 YGG 182
YGG
Sbjct: 472 YGG 474
Score = 130 (50.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 56/187 (29%), Positives = 67/187 (35%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRIRIK 66
NTG G C GY G E + +C PC N G C L++ G RI
Sbjct: 267 NTGQGSYTCSCRPGYSGANCETEIDECGTSPCRNGGSCTDLENGYSCTCPPGFYGRICEL 326
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC-----NCNGHADICDAESGR 121
SA+ G G + GG RC P NC D C +
Sbjct: 327 SAMAC--ADGPCFNG-------GRCSDNPEGGYTCRC-PVGFSGFNCEKKVDSCRSSPCS 376
Query: 122 CICQDNTGGDN--CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
Q GD C RC G+ G E V DC PC N G C ++ C+ CP G
Sbjct: 377 NGAQCVALGDAYLC-RCPAGFSGRQCEDNVDDCASSPCANGGTCRD-GVNEYSCT-CPPG 433
Query: 180 YGGEKMS 186
Y G S
Sbjct: 434 YTGRNCS 440
Score = 36 (17.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 4 RCICQDNTGGDNCER 18
+C CQ+ GG C +
Sbjct: 234 QCNCQEGWGGLFCNQ 248
>RGD|3187 [details] [associations]
symbol:Notch1 "notch 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO;ISS] [GO:0001047 "core promoter binding"
evidence=IEA;ISO;ISS] [GO:0001190 "RNA polymerase II transcription
factor binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA;ISO] [GO:0001669 "acrosomal
vesicle" evidence=IDA] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001708 "cell fate specification"
evidence=IEA;ISO] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISO] [GO:0001889 "liver development" evidence=IEA;ISO]
[GO:0001947 "heart looping" evidence=IEA;ISO] [GO:0002040 "sprouting
angiogenesis" evidence=IEA;ISO] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IMP] [GO:0002193
"MAML1-RBP-Jkappa- ICN1 complex" evidence=IEA;ISO] [GO:0002437
"inflammatory response to antigenic stimulus" evidence=IEA;ISO]
[GO:0003157 "endocardium development" evidence=ISO] [GO:0003160
"endocardium morphogenesis" evidence=IEA;ISO] [GO:0003162
"atrioventricular node development" evidence=IEA;ISO] [GO:0003169
"coronary vein morphogenesis" evidence=IEA;ISO] [GO:0003180 "aortic
valve morphogenesis" evidence=IEA;ISO] [GO:0003181 "atrioventricular
valve morphogenesis" evidence=IEA;ISO] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA;ISO] [GO:0003192 "mitral valve formation"
evidence=IEA;ISO] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IEA;ISO]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISO]
[GO:0003207 "cardiac chamber formation" evidence=ISO] [GO:0003208
"cardiac ventricle morphogenesis" evidence=ISO] [GO:0003209 "cardiac
atrium morphogenesis" evidence=ISO] [GO:0003213 "cardiac right atrium
morphogenesis" evidence=IEA;ISO] [GO:0003214 "cardiac left ventricle
morphogenesis" evidence=IEA;ISO] [GO:0003219 "cardiac right ventricle
formation" evidence=IEA;ISO] [GO:0003222 "ventricular trabecula
myocardium morphogenesis" evidence=IEA;ISO] [GO:0003241 "growth
involved in heart morphogenesis" evidence=IEA;ISO] [GO:0003256
"regulation of transcription from RNA polymerase II promoter involved
in myocardial precursor cell differentiation" evidence=IEA;ISO]
[GO:0003264 "regulation of cardioblast proliferation" evidence=IMP]
[GO:0003270 "Notch signaling pathway involved in regulation of
secondary heart field cardioblast proliferation" evidence=IEA;ISO]
[GO:0003273 "cell migration involved in endocardial cushion
formation" evidence=IEA;ISO] [GO:0003344 "pericardium morphogenesis"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004857 "enzyme inhibitor activity"
evidence=IEA;ISO;ISS] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO;IDA;TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IEA;ISO] [GO:0007219 "Notch signaling
pathway" evidence=ISO;IMP] [GO:0007221 "positive regulation of
transcription of Notch receptor target" evidence=IEA;ISO;IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=ISO] [GO:0007386
"compartment pattern specification" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0007440 "foregut morphogenesis"
evidence=IEA;ISO] [GO:0007492 "endoderm development"
evidence=IEA;ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation" evidence=ISO]
[GO:0008544 "epidermis development" evidence=ISO] [GO:0009790 "embryo
development" evidence=IDA] [GO:0009912 "auditory receptor cell fate
commitment" evidence=IEA;ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0010001 "glial cell differentiation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010718 "positive regulation of epithelial to
mesenchymal transition" evidence=IEA;ISO] [GO:0010812 "negative
regulation of cell-substrate adhesion" evidence=IEA;ISO] [GO:0010832
"negative regulation of myotube differentiation"
evidence=IEA;ISO;ISS] [GO:0014031 "mesenchymal cell development"
evidence=ISO] [GO:0014807 "regulation of somitogenesis"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA;ISO;ISS] [GO:0021515 "cell
differentiation in spinal cord" evidence=IEP] [GO:0021915 "neural
tube development" evidence=IEA;ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030216 "keratinocyte differentiation"
evidence=IEA;ISO] [GO:0030279 "negative regulation of ossification"
evidence=IEA;ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030335 "positive
regulation of cell migration" evidence=IEA;ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO;ISS]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=IEA;ISO] [GO:0031069 "hair follicle morphogenesis"
evidence=IEA;ISO] [GO:0031100 "organ regeneration" evidence=IEP]
[GO:0031490 "chromatin DNA binding" evidence=IEA;ISO] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032495
"response to muramyl dipeptide" evidence=IEA;ISO] [GO:0032496
"response to lipopolysaccharide" evidence=IEP] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0042246 "tissue regeneration"
evidence=IEP] [GO:0042640 "anagen" evidence=IEA;ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process" evidence=ISO]
[GO:0043086 "negative regulation of catalytic activity"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=IEA;ISO] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IEA;ISO] [GO:0045665
"negative regulation of neuron differentiation" evidence=ISO;IMP]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA;ISO] [GO:0045687 "positive regulation of glial cell
differentiation" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO;IMP] [GO:0045955 "negative regulation of
calcium ion-dependent exocytosis" evidence=IEA;ISO] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IEA;ISO;ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA;ISO] [GO:0048103 "somatic stem cell
division" evidence=IEA;ISO] [GO:0048663 "neuron fate commitment"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=IDA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEP]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA;ISO;ISS] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA;ISO;ISS] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IEA;ISO]
[GO:0050678 "regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=ISO] [GO:0050768 "negative regulation of
neurogenesis" evidence=ISO;ISS] [GO:0055008 "cardiac muscle tissue
morphogenesis" evidence=ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060045 "positive regulation of
cardiac muscle cell proliferation" evidence=IEA;ISO] [GO:0060253
"negative regulation of glial cell proliferation"
evidence=IEA;ISO;ISS] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=ISO] [GO:0060411 "cardiac septum morphogenesis"
evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA;ISO] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA;ISO] [GO:0060548 "negative regulation of
cell death" evidence=ISO] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA;ISO] [GO:0060768 "regulation of
epithelial cell proliferation involved in prostate gland development"
evidence=IEA;ISO] [GO:0060842 "arterial endothelial cell
differentiation" evidence=IEA;ISO] [GO:0060843 "venous endothelial
cell differentiation" evidence=IEA;ISO] [GO:0060948 "cardiac vascular
smooth muscle cell development" evidence=IEA;ISO] [GO:0060956
"endocardial cell differentiation" evidence=IEA;ISO] [GO:0060979
"vasculogenesis involved in coronary vascular morphogenesis"
evidence=IEA;ISO] [GO:0060982 "coronary artery morphogenesis"
evidence=IEA;ISO] [GO:0061314 "Notch signaling involved in heart
development" evidence=ISO] [GO:0061384 "heart trabecula
morphogenesis" evidence=ISO] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to hypoxia"
evidence=IEA;ISO;ISS] [GO:0070986 "left/right axis specification"
evidence=IEA;ISO] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEA;ISO] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0072044 "collecting
duct development" evidence=IEA] [GO:0072144 "glomerular mesangial
cell development" evidence=IEA] [GO:0072602 "interleukin-4 secretion"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:0097150 "neuronal
stem cell maintenance" evidence=IEA;ISO] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IEA;ISO] [GO:2000737
"negative regulation of stem cell differentiation" evidence=IEA;ISO]
[GO:2000811 "negative regulation of anoikis" evidence=IEA;ISO]
[GO:2000974 "negative regulation of pro-B cell differentiation"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 RGD:3187 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 Reactome:REACT_111984
eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857 GO:GO:0001669
GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665 GO:GO:0005509
GO:GO:0004872 GO:GO:0007283 GO:GO:0006351 GO:GO:0019899
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0009790
GO:GO:0072144 GO:GO:0030513 GO:GO:0045603 GO:GO:0010718
PROSITE:PS01186 GO:GO:0042246 GO:GO:0001047 GO:GO:0046427
PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812 GO:GO:0072044
GO:GO:0072017 GO:GO:0048709 GO:GO:0045668 GO:GO:0002052 GO:GO:2000811
GO:GO:0010832 GO:GO:0048711 GO:GO:0045662 GO:GO:0048715 GO:GO:0030514
GO:GO:0032495 GO:GO:0031960 GO:GO:0021515 GO:GO:0097150 GO:GO:0003180
GO:GO:0060253 SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 InterPro:IPR024600 Pfam:PF11936 OrthoDB:EOG4HX504
GO:GO:0007221 GO:GO:0003264 EMBL:X57405 IPI:IPI00766721 PIR:S18188
UniGene:Rn.25046 ProteinModelPortal:Q07008 SMR:Q07008 STRING:Q07008
PRIDE:Q07008 UCSC:RGD:3187 InParanoid:Q07008 ArrayExpress:Q07008
Genevestigator:Q07008 GermOnline:ENSRNOG00000019322 Uniprot:Q07008
Length = 2531
Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 50/185 (27%), Positives = 71/185 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 768 CKDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGTCI----DDVA--GYKCNCPLP 820
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + +G E +FS CV C C+ + C+
Sbjct: 821 YT-GATCEVVLAPCATSPCKNSGVCKESEDYESFS-CV-CPTGWQGQTCEIDINECVKSP 877
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ G C C GY G E + DC+ PC N G C D +C
Sbjct: 878 CRHGASCQNTNGSYRC-LCQAGYTGRNCESDIDDCRPNPCHNGGSCT--DGVNAAFCDCL 934
Query: 178 RGYGG 182
G+ G
Sbjct: 935 PGFQG 939
Score = 122 (48.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +C +C GY+G+ + +C PC N G C+
Sbjct: 1142 CEDEVDECSPNPCQNG-ATCTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCI 1199
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1200 DLTNTYK-CS-CPRGTQG 1215
Score = 103 (41.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S C+ C D+ G C C Y G E + C PC N G
Sbjct: 787 NCQTNINEC--ASNPCLNQGTCIDDVAGYKCN-CPLPYTGATCEVVLAPCATSPCKNSGV 843
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C + +D + CP G+ G+
Sbjct: 844 CKESEDYESFSCVCPTGWQGQ 864
Score = 102 (41.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
D+ + +S C+ CQD+ G C C +GY G + V C PC N G C Q +
Sbjct: 1021 DVNECDSRPCLHGGTCQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNT 1079
Query: 169 DQVVCSECPRGYGG 182
Q C EC G+ G
Sbjct: 1080 -QYHC-ECRSGWTG 1091
Score = 98 (39.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVVCSECPRGYG 181
C D GG C C G+ G EG V +C PC +G CVQ +D C EC G+
Sbjct: 1244 CVDQVGGYTCT-CPPGFVGERCEGDVNECLSNPCDPRGTQNCVQRVND-FHC-ECRAGHT 1300
Query: 182 GEK 184
G +
Sbjct: 1301 GRR 1303
Score = 96 (38.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C D GG +C +C GY+G+ + +C PC N G C+ L
Sbjct: 1160 CTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCIDL 1201
Score = 82 (33.9 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CQD+ G C C +GY G + V C PC N G C Q
Sbjct: 1036 CQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSAPCKNGGKCWQ 1076
Score = 70 (29.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C D C C GY G+ E V +C PC N C
Sbjct: 1121 LCVDEEDKHYCH-CQAGYTGSYCEDEVDECSPNPCQNGATC 1160
Score = 63 (27.2 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C ++ GG NC C G+ G + DC C C
Sbjct: 312 CHNSHGGYNCV-CVNGWTGEDCSDNIDDCASAACFQGATC 350
Score = 58 (25.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D C C G+ G+ + V +C PC + G C
Sbjct: 998 CVDGINSFTC-LCPPGFTGSYCQYDVNECDSRPCLHGGTC 1036
Score = 55 (24.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 12/40 (30%), Positives = 14/40 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G C C + G E C PC N G C
Sbjct: 195 CHNEIGSYRCA-CRATHTGPHCELPYVPCSPSPCQNGGTC 233
Score = 38 (18.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 5 CICQDNTGGDNCE 17
C+C + G +CE
Sbjct: 552 CVCTEGYTGTHCE 564
Score = 35 (17.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 5/13 (38%), Positives = 6/13 (46%)
Query: 5 CICQDNTGGDNCE 17
C+C G CE
Sbjct: 855 CVCPTGWQGQTCE 867
>UNIPROTKB|Q07008 [details] [associations]
symbol:Notch1 "Neurogenic locus notch homolog protein 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:2000974 "negative regulation of
pro-B cell differentiation" evidence=ISS] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:3187 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634 GO:GO:0005794
Reactome:REACT_111984 eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857
GO:GO:0001669 GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665
GO:GO:0005509 GO:GO:0004872 GO:GO:0007283 GO:GO:0006351
GO:GO:0019899 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122
GO:GO:0009790 GO:GO:0072144 GO:GO:0030513 GO:GO:0045603
GO:GO:0010718 PROSITE:PS01186 GO:GO:0042246 GO:GO:0001047
GO:GO:0046427 PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812
GO:GO:0072044 GO:GO:0072017 GO:GO:0048709 GO:GO:0045668
GO:GO:0002052 GO:GO:2000811 GO:GO:0010832 GO:GO:0048711
GO:GO:0045662 GO:GO:0048715 GO:GO:0030514 GO:GO:0032495
GO:GO:0031960 GO:GO:0021515 GO:GO:0097150 GO:GO:0003180
GO:GO:0060253 SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 InterPro:IPR024600 Pfam:PF11936
OrthoDB:EOG4HX504 GO:GO:0007221 GO:GO:0003264 EMBL:X57405
IPI:IPI00766721 PIR:S18188 UniGene:Rn.25046
ProteinModelPortal:Q07008 SMR:Q07008 STRING:Q07008 PRIDE:Q07008
UCSC:RGD:3187 InParanoid:Q07008 ArrayExpress:Q07008
Genevestigator:Q07008 GermOnline:ENSRNOG00000019322 Uniprot:Q07008
Length = 2531
Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 50/185 (27%), Positives = 71/185 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 768 CKDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGTCI----DDVA--GYKCNCPLP 820
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + +G E +FS CV C C+ + C+
Sbjct: 821 YT-GATCEVVLAPCATSPCKNSGVCKESEDYESFS-CV-CPTGWQGQTCEIDINECVKSP 877
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ G C C GY G E + DC+ PC N G C D +C
Sbjct: 878 CRHGASCQNTNGSYRC-LCQAGYTGRNCESDIDDCRPNPCHNGGSCT--DGVNAAFCDCL 934
Query: 178 RGYGG 182
G+ G
Sbjct: 935 PGFQG 939
Score = 122 (48.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +C +C GY+G+ + +C PC N G C+
Sbjct: 1142 CEDEVDECSPNPCQNG-ATCTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCI 1199
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1200 DLTNTYK-CS-CPRGTQG 1215
Score = 103 (41.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S C+ C D+ G C C Y G E + C PC N G
Sbjct: 787 NCQTNINEC--ASNPCLNQGTCIDDVAGYKCN-CPLPYTGATCEVVLAPCATSPCKNSGV 843
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C + +D + CP G+ G+
Sbjct: 844 CKESEDYESFSCVCPTGWQGQ 864
Score = 102 (41.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
D+ + +S C+ CQD+ G C C +GY G + V C PC N G C Q +
Sbjct: 1021 DVNECDSRPCLHGGTCQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNT 1079
Query: 169 DQVVCSECPRGYGG 182
Q C EC G+ G
Sbjct: 1080 -QYHC-ECRSGWTG 1091
Score = 98 (39.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVVCSECPRGYG 181
C D GG C C G+ G EG V +C PC +G CVQ +D C EC G+
Sbjct: 1244 CVDQVGGYTCT-CPPGFVGERCEGDVNECLSNPCDPRGTQNCVQRVND-FHC-ECRAGHT 1300
Query: 182 GEK 184
G +
Sbjct: 1301 GRR 1303
Score = 96 (38.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C D GG +C +C GY+G+ + +C PC N G C+ L
Sbjct: 1160 CTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCIDL 1201
Score = 82 (33.9 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CQD+ G C C +GY G + V C PC N G C Q
Sbjct: 1036 CQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSAPCKNGGKCWQ 1076
Score = 70 (29.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C D C C GY G+ E V +C PC N C
Sbjct: 1121 LCVDEEDKHYCH-CQAGYTGSYCEDEVDECSPNPCQNGATC 1160
Score = 63 (27.2 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C ++ GG NC C G+ G + DC C C
Sbjct: 312 CHNSHGGYNCV-CVNGWTGEDCSDNIDDCASAACFQGATC 350
Score = 58 (25.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D C C G+ G+ + V +C PC + G C
Sbjct: 998 CVDGINSFTC-LCPPGFTGSYCQYDVNECDSRPCLHGGTC 1036
Score = 55 (24.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 12/40 (30%), Positives = 14/40 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G C C + G E C PC N G C
Sbjct: 195 CHNEIGSYRCA-CRATHTGPHCELPYVPCSPSPCQNGGTC 233
Score = 38 (18.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 5 CICQDNTGGDNCE 17
C+C + G +CE
Sbjct: 552 CVCTEGYTGTHCE 564
Score = 35 (17.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 5/13 (38%), Positives = 6/13 (46%)
Query: 5 CICQDNTGGDNCE 17
C+C G CE
Sbjct: 855 CVCPTGWQGQTCE 867
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 154 (59.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 53/195 (27%), Positives = 77/195 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT----DCKQCPCPNQGPCVQLDDDQVSNL-GN 59
C C+ NT G C+RC +Y + A +C C C NL
Sbjct: 303 CECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHC---------------NLHAR 347
Query: 60 RTRIRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN- 109
R R ++ L G R+ G+ L R HY GY+ + + + R C C+C+
Sbjct: 348 RCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKAISHRRACKACDCHP 407
Query: 110 -GHAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
G A C+ +G+C C+D G C RCA+GY + + C + P
Sbjct: 408 VGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPVAAPTSSYSSP 465
Query: 168 DDQVVC-SEC--PRG 179
D C S C P+G
Sbjct: 466 DGPTDCDSHCKAPKG 480
>UNIPROTKB|F1SSU8 [details] [associations]
symbol:DLL4 "Delta-like protein" species:9823 "Sus scrofa"
[GO:0072554 "blood vessel lumenization" evidence=IEA] [GO:0061314
"Notch signaling involved in heart development" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0043537
"negative regulation of blood vessel endothelial cell migration"
evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA] [GO:0003344
"pericardium morphogenesis" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0003209
"cardiac atrium morphogenesis" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0001569 "patterning of blood
vessels" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
Pfam:PF00008 Pfam:PF01414 Pfam:PF07657 PROSITE:PS50026
PROSITE:PS51051 SMART:SM00051 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007219 GO:GO:0005509
GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001974
GO:GO:0043537 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
GeneTree:ENSGT00690000101660 KO:K06051 CTD:54567 OMA:LPFNFTW
GO:GO:0072554 GO:GO:0035912 GO:GO:0050767 EMBL:CU571034
EMBL:FP015925 RefSeq:NP_001231347.1 UniGene:Ssc.27171
ProteinModelPortal:F1SSU8 Ensembl:ENSSSCT00000005254
GeneID:100152163 KEGG:ssc:100152163 Uniprot:F1SSU8
Length = 685
Score = 137 (53.3 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 48/176 (27%), Positives = 67/176 (38%)
Query: 19 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSALGGNRTRGLA 78
C GY G E +++C PC N G C +D R G
Sbjct: 312 CRPGYTGVDCELELSECDSNPCRNGGSCKDQEDGY--------RCLCPPGYYGLHCEHST 363
Query: 79 LTRQTHYQLTGYH-HEPTSGGAFS-RCVP----CNCNGHADICD----AESGRCICQDNT 128
LT G E G +++ C P NC D C A G+C+ N
Sbjct: 364 LTCADSPCFNGGSCQERNQGASYACECPPNFTGSNCEKKVDRCTSNPCANGGQCL---NR 420
Query: 129 GGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
G + RC G+ G E ++DC + PC + G C L+ VC+ CP G+ G +
Sbjct: 421 GPNRVCRCRPGFTGAHCELHISDCARSPCAHGGTCHDLETG-FVCT-CPAGFSGRR 474
Score = 119 (46.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 32/108 (29%), Positives = 40/108 (37%)
Query: 91 HHEPTSGGAF-----SRCVPCNCN-GHADI-CDAESGRC---------ICQDNTGGDNCE 134
HH P GA R C C G+ + C+ E C C+D G C
Sbjct: 290 HHSPCKNGATCSNSGQRSYTCTCRPGYTGVDCELELSECDSNPCRNGGSCKDQEDGYRC- 348
Query: 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C GYYG E + C PC N G C + + ECP + G
Sbjct: 349 LCPPGYYGLHCEHSTLTCADSPCFNGGSCQERNQGASYACECPPNFTG 396
Score = 86 (35.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 29/92 (31%), Positives = 36/92 (39%)
Query: 102 RCVPCNCNGHAD--ICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAV-TD-CK 153
RC P H + I D C C D G C C G+ G E + T+ C
Sbjct: 427 RCRPGFTGAHCELHISDCARSPCAHGGTCHDLETGFVCT-CPAGFSGRRCEVRIPTEACA 485
Query: 154 QCPCPNQGPCVQ-LDDDQVVCSECPRGYGGEK 184
PC N C L D VC+ CP G+ G +
Sbjct: 486 SGPCLNGATCYTGLPPDNFVCN-CPYGFVGSR 516
Score = 80 (33.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 16/40 (40%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C+D G C C GYYG E + C PC N G C
Sbjct: 339 CKDQEDGYRC-LCPPGYYGLHCEHSTLTCADSPCFNGGSC 377
Score = 68 (29.0 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 7 CQDNTGGDN--CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 54
CQ+ G + CE C + G+ E V C PC N G C+ ++V
Sbjct: 377 CQERNQGASYACE-CPPNFTGSNCEKKVDRCTSNPCANGGQCLNRGPNRV 425
Score = 52 (23.4 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 4 RCICQDNTGGDNCERCAR 21
R IC DN GD+C R +
Sbjct: 172 RVICSDNYYGDSCSRLCK 189
>UNIPROTKB|O00548 [details] [associations]
symbol:DLL1 "Delta-like protein 1" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0007267
"cell-cell signaling" evidence=IEA] [GO:0007386 "compartment
pattern specification" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0045608 "negative regulation of auditory
receptor cell differentiation" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0070986 "left/right axis specification" evidence=IEA]
[GO:0072014 "proximal tubule development" evidence=IEA] [GO:0072070
"loop of Henle development" evidence=IEA] [GO:0005112 "Notch
binding" evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007219 "Notch signaling pathway" evidence=IMP;NAS;TAS]
[GO:0001709 "cell fate determination" evidence=NAS] [GO:0030097
"hemopoiesis" evidence=NAS] [GO:0030154 "cell differentiation"
evidence=TAS] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0005576 "extracellular region" evidence=NAS]
[GO:0097150 "neuronal stem cell maintenance" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007220 "Notch
receptor processing" evidence=TAS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007368 "determination of left/right symmetry" evidence=ISS]
[GO:0001947 "heart looping" evidence=ISS] Reactome:REACT_2001
InterPro:IPR000742 InterPro:IPR001774 InterPro:IPR001881
InterPro:IPR011651 InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414
Pfam:PF07657 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051
SMART:SM00051 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
Reactome:REACT_111102 GO:GO:0005576 GO:GO:0005887
Pathway_Interaction_DB:ps1pathway GO:GO:0030155 EMBL:CH471051
GO:GO:0045944 GO:GO:0031410 GO:GO:0007219 GO:GO:0005509
GO:GO:0007267 GO:GO:0045747 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007220 GO:GO:0030097 PROSITE:PS00010
GO:GO:0001947 GO:GO:0048839 GO:GO:0072014 GO:GO:0001709
GO:GO:0045638 Orphanet:93925 Orphanet:93924 Orphanet:280200
Orphanet:93926 Orphanet:220386 Orphanet:280195 GO:GO:0001757
EMBL:AF003522 EMBL:AF196571 EMBL:AF222310 EMBL:AY358892
EMBL:AK314234 EMBL:AL078605 IPI:IPI00413521 RefSeq:NP_005609.3
UniGene:Hs.379912 ProteinModelPortal:O00548 SMR:O00548
STRING:O00548 PhosphoSite:O00548 PaxDb:O00548 PRIDE:O00548
DNASU:28514 Ensembl:ENST00000366756 GeneID:28514 KEGG:hsa:28514
UCSC:uc003qxm.3 CTD:28514 GeneCards:GC06M170591 HGNC:HGNC:2908
MIM:606582 neXtProt:NX_O00548 PharmGKB:PA27364 eggNOG:NOG249767
HOGENOM:HOG000267024 HOVERGEN:HBG007139 InParanoid:O00548 KO:K06051
OMA:YCDQCIR OrthoDB:EOG469QT9 ChiTaRS:DLL1 GenomeRNAi:28514
NextBio:50984 Bgee:O00548 CleanEx:HS_DLL1 Genevestigator:O00548
GermOnline:ENSG00000198719 GO:GO:0007386 GO:GO:0072070
GO:GO:0045608 GO:GO:0097150 Uniprot:O00548
Length = 723
Score = 142 (55.0 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 54/186 (29%), Positives = 65/186 (34%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSA 68
NTG G C GY G E + +C PC N G C L+ N
Sbjct: 306 NTGQGSYTCSCRPGYTGATCELGIDECDPSPCKNGGSCTDLE--------NSYSCTCPPG 357
Query: 69 LGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPC-----NCNGHADICDAE--SG 120
G A+T G + G +S RC P NC D C + S
Sbjct: 358 FYGKICELSAMTCADGPCFNGGRCSDSPDGGYSCRC-PVGYSGFNCEKKIDYCSSSPCSN 416
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D C RC G+ G + V DC PC N G C +D C+ CP GY
Sbjct: 417 GAKCVDLGDAYLC-RCQAGFSGRHCDDNVDDCASSPCANGGTCRDGVND-FSCT-CPPGY 473
Query: 181 GGEKMS 186
G S
Sbjct: 474 TGRNCS 479
Score = 136 (52.9 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 54/193 (27%), Positives = 71/193 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D +C C G+YG E + C PC N G C D S +
Sbjct: 343 CTDLENSYSCT-CPPGFYGKICELSAMTCADGPCFNGGRCSDSPDGGYS---------CR 392
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP------CNCNG-----HAD-- 113
+G + G ++ Y + P S GA +CV C C H D
Sbjct: 393 CPVGYS---GFNCEKKIDYCSSS----PCSNGA--KCVDLGDAYLCRCQAGFSGRHCDDN 443
Query: 114 ICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
+ D S C C+D +C C GY G V+ C+ PC N C +
Sbjct: 444 VDDCASSPCANGGTCRDGVNDFSCT-CPPGYTGRNCSAPVSRCEHAPCHNGATCHERGH- 501
Query: 170 QVVCSECPRGYGG 182
+ VC EC RGYGG
Sbjct: 502 RYVC-ECARGYGG 513
Score = 36 (17.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 4 RCICQDNTGGDNCER 18
+C CQ+ GG C +
Sbjct: 273 QCNCQEGWGGLFCNQ 287
>FB|FBgn0004647 [details] [associations]
symbol:N "Notch" species:7227 "Drosophila melanogaster"
[GO:0007498 "mesoderm development" evidence=IMP] [GO:0007398
"ectoderm development" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005622 "intracellular" evidence=NAS;IDA]
[GO:0016360 "sensory organ precursor cell fate determination"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP;TAS] [GO:0030707 "ovarian follicle cell development"
evidence=IMP;TAS] [GO:0001708 "cell fate specification"
evidence=NAS;TAS] [GO:0007219 "Notch signaling pathway"
evidence=NAS] [GO:0009952 "anterior/posterior pattern
specification" evidence=TAS] [GO:0036011 "imaginal disc-derived leg
segmentation" evidence=IMP] [GO:0007478 "leg disc morphogenesis"
evidence=TAS] [GO:0061382 "Malpighian tubule tip cell
differentiation" evidence=IMP] [GO:0005887 "integral to plasma
membrane" evidence=NAS] [GO:0004872 "receptor activity"
evidence=NAS;TAS] [GO:0045165 "cell fate commitment" evidence=NAS]
[GO:0007424 "open tracheal system development" evidence=TAS]
[GO:0035155 "negative regulation of terminal cell fate
specification, open tracheal system" evidence=TAS] [GO:0035157
"negative regulation of fusion cell fate specification"
evidence=TAS] [GO:0007446 "imaginal disc growth" evidence=TAS]
[GO:0007447 "imaginal disc pattern formation" evidence=TAS]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=NAS;TAS] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=IEA;TAS] [GO:0045463
"R8 cell development" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007460 "R8 cell fate commitment" evidence=TAS]
[GO:0007422 "peripheral nervous system development"
evidence=IMP;TAS] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP;TAS] [GO:0016333 "morphogenesis of follicular
epithelium" evidence=NAS] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=TAS] [GO:0007314 "oocyte
anterior/posterior axis specification" evidence=TAS] [GO:0007451
"dorsal/ventral lineage restriction, imaginal disc" evidence=TAS]
[GO:0042067 "establishment of ommatidial planar polarity"
evidence=NAS;TAS] [GO:0048749 "compound eye development"
evidence=NAS;TAS] [GO:0007423 "sensory organ development"
evidence=IMP] [GO:0016330 "second mitotic wave involved in compound
eye morphogenesis" evidence=NAS] [GO:0046667 "compound eye retinal
cell programmed cell death" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045465 "R8 cell differentiation"
evidence=NAS] [GO:0045468 "regulation of R8 cell spacing in
compound eye" evidence=NAS] [GO:0061331 "epithelial cell
proliferation involved in Malpighian tubule morphogenesis"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP;NAS] [GO:0007450 "dorsal/ventral
pattern formation, imaginal disc" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA;NAS;TAS] [GO:0046331 "lateral inhibition"
evidence=IMP;NAS;TAS] [GO:0046329 "negative regulation of JNK
cascade" evidence=NAS] [GO:0007391 "dorsal closure" evidence=TAS]
[GO:0001737 "establishment of imaginal disc-derived wing hair
orientation" evidence=NAS] [GO:0009608 "response to symbiont"
evidence=IMP] [GO:0035171 "lamellocyte differentiation"
evidence=IMP] [GO:0042688 "crystal cell differentiation"
evidence=IMP] [GO:0042676 "compound eye cone cell fate commitment"
evidence=TAS] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035172 "hemocyte proliferation" evidence=IMP] [GO:0035167
"larval lymph gland hemopoiesis" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0046666 "retinal cell programmed cell death"
evidence=TAS] [GO:0007473 "wing disc proximal/distal pattern
formation" evidence=TAS] [GO:0042689 "regulation of crystal cell
differentiation" evidence=TAS] [GO:0008356 "asymmetric cell
division" evidence=TAS] [GO:0007419 "ventral cord development"
evidence=NAS] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007521
"muscle cell fate determination" evidence=IMP] [GO:0042686
"regulation of cardioblast cell fate specification" evidence=IMP]
[GO:0045466 "R7 cell differentiation" evidence=IMP;TAS] [GO:0008587
"imaginal disc-derived wing margin morphogenesis" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0035170 "lymph gland crystal cell differentiation"
evidence=TAS] [GO:0048477 "oogenesis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0035165 "embryonic crystal cell
differentiation" evidence=TAS] [GO:0040008 "regulation of growth"
evidence=IGI;IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007616
"long-term memory" evidence=IGI;IMP;TAS] [GO:0007615
"anesthesia-resistant memory" evidence=IMP] [GO:0048542 "lymph
gland development" evidence=IMP] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IDA;IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IMP] [GO:0045316
"negative regulation of compound eye photoreceptor development"
evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045750 "positive regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IMP] [GO:0007298 "border
follicle cell migration" evidence=IMP] [GO:0007297 "ovarian
follicle cell migration" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0010001 "glial cell differentiation" evidence=IMP] [GO:0008347
"glial cell migration" evidence=IMP] [GO:0035003 "subapical
complex" evidence=IDA] [GO:0005912 "adherens junction"
evidence=IDA] [GO:0035153 "epithelial cell type specification, open
tracheal system" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0050767 "regulation of neurogenesis"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0010629 "negative regulation of gene expression"
evidence=IMP] [GO:0043234 "protein complex" evidence=IPI]
[GO:0030718 "germ-line stem cell maintenance" evidence=IMP]
[GO:0048052 "R1/R6 cell differentiation" evidence=IMP] [GO:0035214
"eye-antennal disc development" evidence=IMP] [GO:0007400
"neuroblast fate determination" evidence=IDA] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0008045
"motor neuron axon guidance" evidence=IMP] [GO:0051489 "regulation
of filopodium assembly" evidence=IMP] [GO:0016348 "imaginal
disc-derived leg joint morphogenesis" evidence=IMP] [GO:0048803
"imaginal disc-derived male genitalia morphogenesis" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0060288 "formation of
a compartment boundary" evidence=IMP] Reactome:REACT_84305
Reactome:REACT_97910 InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005829 GO:GO:0048190 GO:GO:0043234
GO:GO:0005654 GO:GO:0009986 GO:GO:0007015 GO:GO:0007498
GO:GO:0007391 eggNOG:COG0666 GO:GO:0008284 GO:GO:0005768
GO:GO:0007474 EMBL:AE014298 GO:GO:0061331 GO:GO:0007464
GO:GO:0007419 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0007219 GO:GO:0007616
GO:GO:0007422 GO:GO:0005509 GO:GO:0045747 GO:GO:0006351
GO:GO:0003682 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007400
GO:GO:0000122 GO:GO:0008045 GO:GO:0005788 GO:GO:0007298
GO:GO:0005912 GO:GO:0040008 PROSITE:PS01186 GO:GO:0046331
GO:GO:0007157 PROSITE:PS00010 GO:GO:0005796 GO:GO:0046329
GO:GO:0007398 GO:GO:0004888 GO:GO:0008356 GO:GO:0030718
GO:GO:0045750 GO:GO:0007451 GO:GO:0051489 GO:GO:0050768
GO:GO:0046843 GO:GO:0046667 GO:GO:0035153 GO:GO:0030720
GO:GO:0008347 GO:GO:0030713 GO:GO:0061382 GO:GO:0008407
GO:GO:0016330 GO:GO:0008587 GO:GO:0007314 GO:GO:0016348
GO:GO:0009608 GO:GO:0035172 GO:GO:0035214 GO:GO:0035003
GO:GO:0030708 GO:GO:0045463 GO:GO:0007519
GeneTree:ENSGT00700000104305 GO:GO:0007403 GO:GO:0060288
GO:GO:0007446 GO:GO:0007440 GO:GO:0007473 GO:GO:0035171
GO:GO:0042676 GO:GO:0035157 GO:GO:0035155 GO:GO:0007460
GO:GO:0045468 GO:GO:0045466 GO:GO:0048052 GO:GO:0048803
EMBL:AL035395 GO:GO:0035165 SUPFAM:SSF90193 GO:GO:0007521
GO:GO:0045316 GO:GO:0035170 KO:K02599 InterPro:IPR024600
Pfam:PF11936 EMBL:M16152 EMBL:M16153 EMBL:M16149 EMBL:M16150
EMBL:M16151 EMBL:K03508 EMBL:M13689 EMBL:K03507 EMBL:AL035436
EMBL:M16025 EMBL:M12175 PIR:A24420 RefSeq:NP_001245510.1
RefSeq:NP_476859.2 UniGene:Dm.4702 PDB:1OT8 PDB:2JMF PDBsum:1OT8
PDBsum:2JMF ProteinModelPortal:P07207 SMR:P07207 DIP:DIP-5N
IntAct:P07207 MINT:MINT-133064 STRING:P07207 PaxDb:P07207
EnsemblMetazoa:FBtr0070507 EnsemblMetazoa:FBtr0304659 GeneID:31293
KEGG:dme:Dmel_CG3936 CTD:109544 FlyBase:FBgn0004647
InParanoid:P07207 OMA:VCMPGFT OrthoDB:EOG43N5TG
Reactome:REACT_118588 EvolutionaryTrace:P07207 GenomeRNAi:31293
NextBio:772898 Bgee:P07207 GermOnline:CG3936 GO:GO:0042686
GO:GO:0042689 Uniprot:P07207
Length = 2703
Score = 160 (61.4 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 52/183 (28%), Positives = 78/183 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR--T 61
R IC D+ G +CE C GY G + E + DC PC ++G C+ D + L + T
Sbjct: 576 RGICHDSIAGYSCE-CPPGYTGTSCEININDCDSNPC-HRGKCID-DVNSFKCLCDPGYT 632
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG-HADICDAESG 120
+ + + ++ Y+ + +G + C N N H++ C+
Sbjct: 633 GYICQKQINECESNPCQFDGHCQDRVGSYYCQCQAGTSGKNC-EVNVNECHSNPCN-NGA 690
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV---VCSECP 177
CI D C+ C G+ G E V +C PC N G C+ DQV C ECP
Sbjct: 691 TCI--DGINSYKCQ-CVPGFTGQHCEKNVDECISSPCANNGVCI----DQVNGYKC-ECP 742
Query: 178 RGY 180
RG+
Sbjct: 743 RGF 745
Score = 146 (56.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 54/190 (28%), Positives = 74/190 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVSN-----LGN 59
C D GG C C G+ G EG + +C PC N G CVQL ++ N +G
Sbjct: 1274 CIDRVGGFECV-CQPGFVGARCEGDINECLSNPCSNAGTLDCVQLVNNYHCNCRPGHMGR 1332
Query: 60 RTRIRIK-SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
++ A + G RQ+ G HH + G + + NC CD+
Sbjct: 1333 HCEHKVDFCAQSPCQNGGNCNIRQS-----G-HHCICNNGFYGK----NCELSGQDCDSN 1382
Query: 119 S---GRCICQDNTGGDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
G C+ D G CE C RG G E + +C PC C L D C
Sbjct: 1383 PCRVGNCVVADEGFGYRCE-CPRGTLGEHCEIDTLDECSPNPCAQGAACEDLLGDYE-CL 1440
Query: 175 ECPRGYGGEK 184
CP + G++
Sbjct: 1441 -CPSKWKGKR 1449
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/190 (29%), Positives = 71/190 (37%)
Query: 6 ICQDN--TGGDNCERCARGYYGNALEGAVTDCKQ-CPCPNQGPCVQLDDDQVSNLGNRTR 62
IC + G C CA GY G + +C Q PC + G CV N R
Sbjct: 423 ICDTSPINGSYACS-CATGYKGVDCSEDIDECDQGSPCEHNGICV--------NTPGSYR 473
Query: 63 IRIKSALGGNRTRGLALTRQTH-YQLTGYHHEPTSGGAFSRCVPC--NCNG---HADICD 116
G R ++H Q G + G F RCV C G DI +
Sbjct: 474 CNCSQGFTGPRCETNINECESHPCQNEGSCLDDP--GTF-RCV-CMPGFTGTQCEIDIDE 529
Query: 117 AESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
+S C+ C D G C CA G+ G + + DC+ PC N+G C D
Sbjct: 530 CQSNPCLNDGTCHDKINGFKCS-CALGFTGARCQINIDDCQSQPCRNRGICH--DSIAGY 586
Query: 173 CSECPRGYGG 182
ECP GY G
Sbjct: 587 SCECPPGYTG 596
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 45/163 (27%), Positives = 64/163 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVSNL----GNRT 61
C D+ G C C G+ G E + +C+ PC N G C +++ + S G R
Sbjct: 503 CLDDPGTFRCV-CMPGFTGTQCEIDIDECQSNPCLNDGTCHDKINGFKCSCALGFTGARC 561
Query: 62 RIRIKSALGGN-RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
+I I R RG+ H + GY E G + C N N D G
Sbjct: 562 QINIDDCQSQPCRNRGIC-----HDSIAGYSCECPPGYTGTSC-EININD-CDSNPCHRG 614
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
+CI D+ C C GY G + + +C+ PC G C
Sbjct: 615 KCI--DDVNSFKC-LCDPGYTGYICQKQINECESNPCQFDGHC 654
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 54/186 (29%), Positives = 65/186 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-----QVSNLGNRT 61
C D +C C G G E DCK C N G C+ Q +G R
Sbjct: 1236 CHDRVMNFSCS-CPPGTMGIICEINKDDCKPGACHNNGSCIDRVGGFECVCQPGFVGARC 1294
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
I L + L QL +H G R +C D C A+S
Sbjct: 1295 EGDINECLSNPCSNAGTLDC---VQLVNNYHCNCRPGHMGR----HCEHKVDFC-AQSP- 1345
Query: 122 CI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
C C G +C C G+YG E + DC PC G CV D+ ECP
Sbjct: 1346 CQNGGNCNIRQSGHHCI-CNNGFYGKNCELSGQDCDSNPC-RVGNCVVADEGFGYRCECP 1403
Query: 178 RGYGGE 183
RG GE
Sbjct: 1404 RGTLGE 1409
Score = 119 (46.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/89 (31%), Positives = 42/89 (47%)
Query: 102 RCVPC----NCNGHADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
+CVP +C + D C + + +C D G CE C RG+Y V +C
Sbjct: 702 QCVPGFTGQHCEKNVDECISSPCANNGVCIDQVNGYKCE-CPRGFYDAHCLSDVDECASN 760
Query: 156 PCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
PC N+G C ++ +C CP GY G++
Sbjct: 761 PCVNEGRCED-GINEFIC-HCPPGYTGKR 787
Score = 101 (40.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 26/84 (30%), Positives = 37/84 (44%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S G CI D G NC C GY G + + C PC N
Sbjct: 1018 NCQTNDEDCTESSCLNGGSCI--DGINGYNCS-CLAGYSGANCQYKLNKCDSNPCLNGAT 1074
Query: 163 CVQLDDDQVVCSECPRGYGGEKMS 186
C + +++ C CP G+ G++ S
Sbjct: 1075 CHE-QNNEYTC-HCPSGFTGKQCS 1096
Score = 92 (37.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 27/83 (32%), Positives = 36/83 (43%)
Query: 113 DICDAESGRC----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLD 167
DI + S C C D +C+ C GY G E + DC PC N G C+ +++
Sbjct: 791 DIDECSSNPCQHGGTCYDKLNAFSCQ-CMPGYTGQKCETNIDDCVTNPCGNGGTCIDKVN 849
Query: 168 DDQVVCSECPRGYGGE-KMSPGA 189
+ VC G E KM P A
Sbjct: 850 GYKCVCKVPFTGRDCESKMDPCA 872
Score = 86 (35.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C D G CE C RG+Y V +C PC N+G C
Sbjct: 729 VCIDQVNGYKCE-CPRGFYDAHCLSDVDECASNPCVNEGRC 768
Score = 86 (35.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C D G +C C G+ G E + +C PC N C Q + C+ CP G+ G
Sbjct: 961 CLDGIGDYSC-LCVDGFDGKHCETDINECLSQPCQNGATCSQYVNSYT-CT-CPLGFSG 1016
Score = 68 (29.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C + G C C +GY G DC PC N G C+
Sbjct: 923 CLNVPGSYRC-LCTKGYEGRDCAINTDDCASFPCQNGGTCL 962
Score = 66 (28.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
IC+ N C +C +G+ G E DC C N G C+
Sbjct: 269 ICRSNGLSYEC-KCPKGFEGKNCEQNYDDCLGHLCQNGGTCI 309
Score = 63 (27.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 13/40 (32%), Positives = 15/40 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G C C GY G + C PC N G C
Sbjct: 232 CVNTHGSYQC-MCPTGYTGKDCDTKYKPCSPSPCQNGGIC 270
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 153 (58.9 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 45/164 (27%), Positives = 66/164 (40%)
Query: 5 CICQDNTGGDNCERCARGYY----GNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR 60
C C NT G +CERC ++ A +CK+C C + N
Sbjct: 332 CECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCNKHARQCRF---------NM 382
Query: 61 TRIRIKSALGGN---RTRGLALTRQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GHAD- 113
R+ + G R R H G++ + T + C C+C+ G +
Sbjct: 383 EIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGK 442
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQCP 156
IC++ SG+C C+D G C RCARGY + + C KQ P
Sbjct: 443 ICNSTSGQCPCKDGVTGLTCNRCARGYQQS--RSHIAPCIKQPP 484
Score = 119 (46.9 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 34/101 (33%), Positives = 48/101 (47%)
Query: 65 IKSALGGN-RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE-SGR- 121
I++ LGG+ T G L HY ++ + + GG C CNGHA C + SG+
Sbjct: 285 IEANLGGDVATSGSGL----HYAISDF----SVGGR------CKCNGHASKCSTDASGQL 330
Query: 122 -CICQDNTGGDNCERCARGYY----GNALEGAVTDCKQCPC 157
C C NT G +CERC ++ A +CK+C C
Sbjct: 331 NCECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNC 371
>UNIPROTKB|F1Q0A7 [details] [associations]
symbol:SVEP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR000436 Pfam:PF00084
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF12661 GeneTree:ENSGT00680000099691
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 EMBL:AAEX03008055
Ensembl:ENSCAFT00000004697 Uniprot:F1Q0A7
Length = 3253
Score = 160 (61.4 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 50/190 (26%), Positives = 76/190 (40%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNLGNR 60
F IC+D G CE C GY G E + +C PC N+G C L + +
Sbjct: 921 FNNGICKDLVGEFICE-CPSGYTGQLCEENINECNSSPCLNKGTCTDGLAGYHCTCVKGY 979
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICD 116
T + ++ + N Q+ L E GG +C P C + D C
Sbjct: 980 TGLHCETEV--NEC-------QSSPCLNNAVCEDQVGGFLCKCPPGFLGTRCEKNLDECL 1030
Query: 117 AESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
++ + C+D C+ CA G+ G E + +C+ PC NQ CV D+
Sbjct: 1031 SQPCKNGATCKDGANSFRCQ-CAAGFTGPHCEVNINECQSNPCRNQATCV--DELNSYSC 1087
Query: 175 ECPRGYGGEK 184
+C G+ G +
Sbjct: 1088 KCQPGFSGSR 1097
Score = 124 (48.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 44/181 (24%), Positives = 65/181 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ G C C GY G E + +C PC N G C L + + + ++
Sbjct: 888 CQQLGRGYVC-LCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGEFICECPSGYTGQLC 946
Query: 67 SALGGNRTRGLALTRQTHYQ-LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC--- 122
L + T L GYH G C ++ + +S C
Sbjct: 947 EENINECNSSPCLNKGTCTDGLAGYHCTCVKGYTGLHC-------ETEVNECQSSPCLNN 999
Query: 123 -ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
+C+D GG C +C G+ G E + +C PC N C + C +C G+
Sbjct: 1000 AVCEDQVGGFLC-KCPPGFLGTRCEKNLDECLSQPCKNGATCKD-GANSFRC-QCAAGFT 1056
Query: 182 G 182
G
Sbjct: 1057 G 1057
Score = 42 (19.8 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 6 ICQDNTGGDNCE-RCARGY 23
IC ++ G NC C GY
Sbjct: 420 ICTQDSAGVNCTLSCLEGY 438
>MGI|MGI:2446294 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO;IMP] [GO:0071907 "determination
of digestive tract left/right asymmetry" evidence=ISO;IMP]
[GO:1900164 "nodal signaling pathway involved in determination of
lateral mesoderm left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:2446294 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:1954 eggNOG:NOG304142
HOVERGEN:HBG108128 OMA:GHSMVFH EMBL:EU723517 EMBL:BC031185
EMBL:BC036727 EMBL:BC051121 EMBL:BC060277 EMBL:AK122377
EMBL:AK030408 IPI:IPI00930841 RefSeq:NP_001153872.1
UniGene:Mm.38527 ProteinModelPortal:P60882 SMR:P60882
PhosphoSite:P60882 PaxDb:P60882 PRIDE:P60882
Ensembl:ENSMUST00000128119 GeneID:269878 KEGG:mmu:269878
UCSC:uc009fsj.2 InParanoid:B3GR00 OrthoDB:EOG4JHCDR NextBio:393077
Bgee:P60882 CleanEx:MM_MEGF8 Genevestigator:P60882
GermOnline:ENSMUSG00000045039 Uniprot:P60882
Length = 2789
Score = 146 (56.5 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 54/180 (30%), Positives = 70/180 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNAL----EGAVTDCKQ--CPCPNQGPCVQLDDDQVSNL 57
R C + C C RGY G+ + + DC C P CV D S+L
Sbjct: 1088 RATCLNTPLSYECH-CQRGYQGDGITHCNRTCLEDCGHGVCSGPPDFTCV-CDLGWTSDL 1145
Query: 58 GNRTRI------RIKSALGGN-----RTRGLALTRQTHYQLTGYHHEPTSGGAFSR---- 102
T R G + R RG + G H E G+F
Sbjct: 1146 PPPTPAPGPPAPRCSRDCGCSFHSHCRRRGPGYCDECQDWTWGEHCERCRPGSFGNATGS 1205
Query: 103 --CVPCNCNGHADI----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQC 155
C PC CNGH D CD +G C CQD+T G +C+ C+ GYYG+ G C ++C
Sbjct: 1206 GGCRPCQCNGHGDPRRGHCDNLTGLCFCQDHTEGAHCQICSPGYYGDPRAGG--SCFREC 1263
Score = 136 (52.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 40/142 (28%), Positives = 63/142 (44%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP--CP-NQGPCVQLDDDQVSNLG---- 58
+C+++T G +CE+C + G+AL G C+ C C N CV + +++
Sbjct: 2216 LCRNHTKGSHCEQCLPLFVGSALGGGT--CRPCHAFCRGNSHVCVSRKELEMARKEPEKY 2273
Query: 59 --NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAF---SRCVPCNCNGHAD 113
+ I A G + + + Q + G E G F +C C CNGHAD
Sbjct: 2274 SLDPEEIETWVAEGPSEDEAVCVNCQNNSY--GDRCESCLHGYFLLDGKCTKCQCNGHAD 2331
Query: 114 ICDAESGR-CICQDNTGGDNCE 134
C+ + G C CQ+NT C+
Sbjct: 2332 TCNEQDGTGCPCQNNTETGTCQ 2353
Score = 43 (20.2 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 146 EGAVTDCKQCP-CPNQGPCV 164
E ++ CK C CP +G C+
Sbjct: 1892 EASIPRCKWCTNCP-EGACI 1910
Score = 42 (19.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
CIC + GG +C
Sbjct: 1469 CICAEGFGGPDC 1480
>UNIPROTKB|I3L9D5 [details] [associations]
symbol:NOTCH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00066
Pfam:PF07645 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0030154 GO:GO:0016020 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 EMBL:CU467692
Ensembl:ENSSSCT00000025522 OMA:VCPRGTE Uniprot:I3L9D5
Length = 1175
Score = 155 (59.6 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 56/186 (30%), Positives = 76/186 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+ NT G +C RGY G E V +C PC NQ C LD +G T I
Sbjct: 344 RCV---NTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATC--LD-----RIGQFTCI 393
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG---HADICDAESG 120
+ G + + + G + +G FS P +G D+ + S
Sbjct: 394 CMAGFTGTYCEVDMDECQSSPCVNGGVCKDKVNG--FSCTCPSGFSGAMCQLDVDECAST 451
Query: 121 RCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
C C D G +C CA GY G E V +C+ PC + G C+ L D + +C C
Sbjct: 452 PCRNGAKCVDQPDGFSCA-CAPGYTGTRCESQVDECRSQPCRHGGKCLDLVD-KYLC-RC 508
Query: 177 PRGYGG 182
P G G
Sbjct: 509 PPGTTG 514
Score = 131 (51.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 51/184 (27%), Positives = 69/184 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNLGNRTRIRI 65
CQ GG CE C GY G+ E V +C PC + G CV L + S T +R
Sbjct: 853 CQGYMGGYVCE-CPAGYTGDNCEDDVDECASQPCQHNGTCVDLVGGFRCSCPPGYTGLRC 911
Query: 66 KSALGGNRTRGLALTRQTHYQLT----GYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
++ + R G T L G+H +G RC + C G+
Sbjct: 912 EADINECRP-GACHAAHTRDCLQDPGGGFHCLCHAGFTGPRCQTVLSPCESQPCQ-HGGQ 969
Query: 122 CICQDNTGGD---NCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
C GG +C C ++G E C++ CP PC Q C+ CP
Sbjct: 970 CRPSPGPGGALTFSCH-CVLPFWGPRCERVARSCRELQCPVGVPCQQTVRGPR-CA-CPP 1026
Query: 179 GYGG 182
G G
Sbjct: 1027 GLSG 1030
Score = 121 (47.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 57/189 (30%), Positives = 74/189 (39%)
Query: 5 CICQDNTGGDNCER----CARG--YYGNALEGAVTDCKQCPCP--NQGPCVQLDDDQVSN 56
C+C + G++C + CA ++G V C CP G LDD VSN
Sbjct: 234 CVCVNGWTGESCSQNIDDCATAVCFHGATCHDRVASF-YCACPMGKTGLLCHLDDACVSN 292
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN-GHADIC 115
+ I N G A+ G+ +GGA + V C+ G A
Sbjct: 293 PCHEDAI-----CDTNPVNGRAICTCP----PGF-----TGGACDQDVD-ECSIGEAGAN 337
Query: 116 DAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD-DQVVC 173
E GRC+ NT G +C RGY G E V +C PC NQ C LD Q C
Sbjct: 338 PCEHLGRCV---NTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATC--LDRIGQFTC 392
Query: 174 SECPRGYGG 182
C G+ G
Sbjct: 393 I-CMAGFTG 400
Score = 114 (45.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/78 (38%), Positives = 36/78 (46%)
Query: 107 NCNGHADICDAESGRC--ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
+C D C A+ + CQ GG CE C GY G+ E V +C PC + G CV
Sbjct: 834 HCEQEVDPCLAQPCQHGGTCQGYMGGYVCE-CPAGYTGDNCEDDVDECASQPCQHNGTCV 892
Query: 165 QLDDDQVVCSECPRGYGG 182
L CS CP GY G
Sbjct: 893 DLVGG-FRCS-CPPGYTG 908
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 52/190 (27%), Positives = 68/190 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNL----GNRT 61
C+ TG +C C GY G + + + DC PC N G C + S L G R
Sbjct: 613 CESATGSFSCT-CHEGYSGPSCDQDINDCDPNPCLNGGSCQDGVGSFSCSCLPGFAGPRC 671
Query: 62 RIRIKSAL--------GGNRTRGL-ALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA 112
+ L GG G+ + T TG H + + SR PC H
Sbjct: 672 ARDVDECLSSPCSCFNGGTCVDGVTSFTCLCRPGYTGAHCQHEADPCLSR--PCL---HG 726
Query: 113 DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
IC A G C C G+ G + V C + PC N G C +
Sbjct: 727 GICTAAHP---------GFRCA-CPEGFTGAQCQTLVDWCSRVPCQNGGRCARAGAS-FY 775
Query: 173 CSECPRGYGG 182
C CP G+ G
Sbjct: 776 CL-CPPGWSG 784
Score = 94 (38.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+C A G+C+ D G C C G G+ E V C PC + G C Q VC
Sbjct: 808 LCQA-GGQCV--DKDGSHYCV-CPEGRTGSHCEQEVDPCLAQPCQHGGTC-QGYMGGYVC 862
Query: 174 SECPRGYGGE 183
ECP GY G+
Sbjct: 863 -ECPAGYTGD 871
Score = 63 (27.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
IC G C C G+ G + V C + PC N G C +
Sbjct: 728 ICTAAHPGFRCA-CPEGFTGAQCQTLVDWCSRVPCQNGGRCAR 769
Score = 58 (25.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG +C C G+ G + + DC C + C
Sbjct: 225 CFNTLGGHSCV-CVNGWTGESCSQNIDDCATAVCFHGATC 263
Score = 51 (23.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGA---VTDCKQCPCPNQGPC 46
+C D GG C C G+ G ++ C PC + G C
Sbjct: 571 VCHDAPGGFRCV-CEPGWSGPQCSRQCELLSPCVPNPCEHGGHC 613
Score = 37 (18.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 19 CARGYYGNALEGAVTD-CKQCPCPNQGPC 46
C G+ G + + D C PC +G C
Sbjct: 1 CPPGWVGEWCQ--LEDPCHSGPCAGRGVC 27
>UNIPROTKB|J9NWK3 [details] [associations]
symbol:SVEP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002035
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00092 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50234 SMART:SM00179
SMART:SM00181 SMART:SM00327 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR000436 Pfam:PF00084
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF12661 GeneTree:ENSGT00680000099691
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 CTD:79987
EMBL:AAEX03008055 RefSeq:XP_532030.2 Ensembl:ENSCAFT00000046390
GeneID:474799 KEGG:cfa:474799 Uniprot:J9NWK3
Length = 3569
Score = 160 (61.4 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 50/190 (26%), Positives = 76/190 (40%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNLGNR 60
F IC+D G CE C GY G E + +C PC N+G C L + +
Sbjct: 1240 FNNGICKDLVGEFICE-CPSGYTGQLCEENINECNSSPCLNKGTCTDGLAGYHCTCVKGY 1298
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICD 116
T + ++ + N Q+ L E GG +C P C + D C
Sbjct: 1299 TGLHCETEV--NEC-------QSSPCLNNAVCEDQVGGFLCKCPPGFLGTRCEKNLDECL 1349
Query: 117 AESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
++ + C+D C+ CA G+ G E + +C+ PC NQ CV D+
Sbjct: 1350 SQPCKNGATCKDGANSFRCQ-CAAGFTGPHCEVNINECQSNPCRNQATCV--DELNSYSC 1406
Query: 175 ECPRGYGGEK 184
+C G+ G +
Sbjct: 1407 KCQPGFSGSR 1416
Score = 124 (48.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/181 (24%), Positives = 65/181 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ G C C GY G E + +C PC N G C L + + + ++
Sbjct: 1207 CQQLGRGYVC-LCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGEFICECPSGYTGQLC 1265
Query: 67 SALGGNRTRGLALTRQTHYQ-LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC--- 122
L + T L GYH G C ++ + +S C
Sbjct: 1266 EENINECNSSPCLNKGTCTDGLAGYHCTCVKGYTGLHC-------ETEVNECQSSPCLNN 1318
Query: 123 -ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
+C+D GG C +C G+ G E + +C PC N C + C +C G+
Sbjct: 1319 AVCEDQVGGFLC-KCPPGFLGTRCEKNLDECLSQPCKNGATCKD-GANSFRC-QCAAGFT 1375
Query: 182 G 182
G
Sbjct: 1376 G 1376
Score = 97 (39.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 23/60 (38%), Positives = 28/60 (46%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
CQ G C C GY G E + +C PC N G C L + +C ECP GY G+
Sbjct: 1207 CQQLGRGYVC-LCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGE-FIC-ECPSGYTGQ 1263
Score = 70 (29.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C C +TG C C +GYYG L+ +C CP P
Sbjct: 294 CKCGTHTGQFECV-CEKGYYGKGLQ---YECTACPSGTYKP 330
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 6 ICQDNTGGDNCE-RCARGY 23
IC ++ G NC C GY
Sbjct: 739 ICTQDSAGVNCTLSCLEGY 757
>UNIPROTKB|J9P1K9 [details] [associations]
symbol:SVEP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002035
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00092 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50234 SMART:SM00179
SMART:SM00181 SMART:SM00327 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 PROSITE:PS00010 InterPro:IPR000436 Pfam:PF00084
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF12661 GeneTree:ENSGT00680000099691
InterPro:IPR001759 Pfam:PF00354 PRINTS:PR00895 Gene3D:2.40.155.10
InterPro:IPR023413 InterPro:IPR011641 Pfam:PF07699
InterPro:IPR003410 Pfam:PF02494 PROSITE:PS50825 OMA:IDCRLED
EMBL:AAEX03008055 Ensembl:ENSCAFT00000046535 Uniprot:J9P1K9
Length = 3640
Score = 160 (61.4 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 50/190 (26%), Positives = 76/190 (40%)
Query: 2 FRRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVSNLGNR 60
F IC+D G CE C GY G E + +C PC N+G C L + +
Sbjct: 1311 FNNGICKDLVGEFICE-CPSGYTGQLCEENINECNSSPCLNKGTCTDGLAGYHCTCVKGY 1369
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICD 116
T + ++ + N Q+ L E GG +C P C + D C
Sbjct: 1370 TGLHCETEV--NEC-------QSSPCLNNAVCEDQVGGFLCKCPPGFLGTRCEKNLDECL 1420
Query: 117 AESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCS 174
++ + C+D C+ CA G+ G E + +C+ PC NQ CV D+
Sbjct: 1421 SQPCKNGATCKDGANSFRCQ-CAAGFTGPHCEVNINECQSNPCRNQATCV--DELNSYSC 1477
Query: 175 ECPRGYGGEK 184
+C G+ G +
Sbjct: 1478 KCQPGFSGSR 1487
Score = 124 (48.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/181 (24%), Positives = 65/181 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ G C C GY G E + +C PC N G C L + + + ++
Sbjct: 1278 CQQLGRGYVC-LCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGEFICECPSGYTGQLC 1336
Query: 67 SALGGNRTRGLALTRQTHYQ-LTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRC--- 122
L + T L GYH G C ++ + +S C
Sbjct: 1337 EENINECNSSPCLNKGTCTDGLAGYHCTCVKGYTGLHC-------ETEVNECQSSPCLNN 1389
Query: 123 -ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
+C+D GG C +C G+ G E + +C PC N C + C +C G+
Sbjct: 1390 AVCEDQVGGFLC-KCPPGFLGTRCEKNLDECLSQPCKNGATCKD-GANSFRC-QCAAGFT 1446
Query: 182 G 182
G
Sbjct: 1447 G 1447
Score = 97 (39.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 23/60 (38%), Positives = 28/60 (46%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
CQ G C C GY G E + +C PC N G C L + +C ECP GY G+
Sbjct: 1278 CQQLGRGYVC-LCPSGYTGLKCEIDIDECSSLPCFNNGICKDLVGE-FIC-ECPSGYTGQ 1334
Score = 70 (29.7 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 45
C C +TG C C +GYYG L+ +C CP P
Sbjct: 294 CKCGTHTGQFECV-CEKGYYGKGLQ---YECTACPSGTYKP 330
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 6 ICQDNTGGDNCE-RCARGY 23
IC ++ G NC C GY
Sbjct: 739 ICTQDSAGVNCTLSCLEGY 757
>UNIPROTKB|F1PPP5 [details] [associations]
symbol:NOTCH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0030154 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0050793 GeneTree:ENSGT00700000104305
SUPFAM:SSF90193 InterPro:IPR022336 PRINTS:PR01985 OMA:VCMPGFT
EMBL:AAEX03011027 Ensembl:ENSCAFT00000017040 Uniprot:F1PPP5
Length = 2324
Score = 158 (60.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 56/193 (29%), Positives = 76/193 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C+D GG CE C GY G E V +C+ PC N G CV L + + G R +
Sbjct: 1419 CRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCVDLVNHFKCSCPPGTRGLLC 1477
Query: 64 --RIKSALGGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGHADI 114
I +GG G + R Y L G+ E G + C+ PC+ G D
Sbjct: 1478 EENIDDCVGGPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGD-INECLSNPCSSEGSLDC 1536
Query: 115 CDAESGR-CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQV 171
+ C+C+ G +CE + C Q PC N G C + D
Sbjct: 1537 IQLTNDYLCVCRSAFTGRHCETF------------IDVCPQMPCLNGGTCAVASNMPDGF 1584
Query: 172 VCSECPRGYGGEK 184
+C CP G+ G K
Sbjct: 1585 IC-RCPPGFSGAK 1596
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 48/186 (25%), Positives = 67/186 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G C C +G+ G + + +C PC NQG C N+ T +
Sbjct: 1027 CDNLVNGYRCT-CKKGFKGYNCQVNIDECASNPCLNQGTCFD-------NISGYTCHCVL 1078
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPCNCNGHA---DICDAESGRC 122
G N LA + E +++ C P G DI + S C
Sbjct: 1079 PYTGKNCQTVLAPCSPNPCENAAVCKEAPDFESYTCLCAP-GWQGQRCTIDIDECVSKPC 1137
Query: 123 ----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
+C + G CE C G+ G E + DC PC N G CV D C
Sbjct: 1138 MNHGLCHNTQGSYMCE-CPPGFSGMDCEDDIDDCLANPCQNGGSCV--DGVNTFSCLCHP 1194
Query: 179 GYGGEK 184
G+ G+K
Sbjct: 1195 GFIGDK 1200
Score = 115 (45.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 29/77 (37%), Positives = 35/77 (45%)
Query: 108 CNGHADICDAESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C D C + + C+D GG CE C GY G E V +C+ PC N G CV
Sbjct: 1401 CEEQLDECSSNPCQHGATCRDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCVD 1459
Query: 166 LDDDQVVCSECPRGYGG 182
L + CS CP G G
Sbjct: 1460 LVN-HFKCS-CPPGTRG 1474
Score = 112 (44.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 32/95 (33%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 695 FHCECLKGYAGPRCEMDINEC--HSDPCQNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 748
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
+ +C+ PC N G CV ++ C CP G+ G
Sbjct: 749 EINECQSNPCVNNGQCVD-KVNRFQCL-CPPGFTG 781
Score = 108 (43.1 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
CN H C E IC D G C C GY G + V C + PC N+G C+Q +
Sbjct: 1284 CNSHP--CLNEG---ICVDGLGTYRCT-CPLGYTGKNCQTLVNLCSRSPCKNKGTCIQ-E 1336
Query: 168 DDQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1337 KAESRCL-CPSGWAG 1350
Score = 88 (36.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
IC D G C C GY G + V C + PC N+G C+Q
Sbjct: 1294 ICVDGLGTYRCT-CPLGYTGKNCQTLVNLCSRSPCKNKGTCIQ 1335
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G E + +C PC + G C Q
Sbjct: 787 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGVLCEENIDNCDPDPC-HHGQC-QDGI 843
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 844 DSYTCI-CNPGYMG 856
Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/76 (30%), Positives = 30/76 (39%)
Query: 108 CNGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C + D CD + CQD C C GY G + +C PC N G C+ L
Sbjct: 822 CEENIDNCDPDPCHHGQCQDGIDSYTCI-CNPGYMGAICSDQIDECYSSPCLNDGRCIDL 880
Query: 167 DDDQVVCSECPRGYGG 182
+ C+ C G G
Sbjct: 881 VNGYQ-CN-CQPGTSG 894
Score = 86 (35.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 24/81 (29%), Positives = 33/81 (40%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
+C + D C S G C+ D +C C G+ G + +C PC N+G
Sbjct: 1238 HCENNIDECTESSCFNGGTCV--DGINSFSC-LCPLGFTGPFCLHEINECNSHPCLNEGI 1294
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
CV D CP GY G+
Sbjct: 1295 CV--DGLGTYRCTCPLGYTGK 1313
Score = 82 (33.9 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E + +C+ PC N G CV
Sbjct: 726 CLDKIGGFTC-LCMPGFKGVHCELEINECQSNPCVNNGQCV 765
Score = 79 (32.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C + G +CE C +GY G E + +C PC N C+
Sbjct: 688 CVNTDGAFHCE-CLKGYAGPRCEMDINECHSDPCQNDATCL 727
Score = 75 (31.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 22/69 (31%), Positives = 29/69 (42%)
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+C SG CI N G + +C GY G+ E + +C PC + C C
Sbjct: 1374 LCQ-HSGICI---NAGNSHHCQCPLGYTGSYCEEQLDECSSNPCQHGATCRDFIGGYR-C 1428
Query: 174 SECPRGYGG 182
EC GY G
Sbjct: 1429 -ECVPGYQG 1436
Score = 71 (30.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C +G+ G + C PC N G C Q D
Sbjct: 453 CLNLPGSYQCQ-CPQGFTGKHCDSPYVPCAPSPCVNGGTCRQTGD 496
Score = 67 (28.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C +C G+ G E + +C + C N G CV
Sbjct: 1219 CSDYVNSYTC-KCQAGFDGVHCENNIDECTESSCFNGGTCV 1258
Score = 64 (27.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D +C C G+ G + +C PC N+G CV
Sbjct: 1257 CVDGINSFSC-LCPLGFTGPFCLHEINECNSHPCLNEGICV 1296
Score = 62 (26.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D +C C G+ G+ + + +C PC N G C
Sbjct: 1181 CVDGVNTFSC-LCHPGFIGDKCQTDMNECLSEPCKNGGTC 1219
Score = 62 (26.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G+ G + + DC PC N C+
Sbjct: 764 CVDKVNRFQC-LCPPGFTGPVCQIDIDDCSSTPCLNGAKCI 803
Score = 62 (26.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-C-KQCPCPNQGPC 46
C+ Q G C RCA G+ G+ + + T C PC N G C
Sbjct: 334 CVAQAMLGKATC-RCALGFTGDDCQYSTTHPCFVSHPCLNGGTC 376
Score = 59 (25.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 7 CQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ TG E C G+ G E + DC C N G CV
Sbjct: 491 CRQ-TGDFTFECNCLPGFEGITCERNIDDCPNHKCQNGGVCV 531
Score = 58 (25.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C + GG C C G+ G+ + DC C C+
Sbjct: 570 CTNRNGGYGCV-CVNGWSGDDCSENIDDCAFASCTPGSTCI 609
Score = 54 (24.1 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 6 ICQDNT-GGDNCERCARGYYGNALEGAVTDCKQC---PCPNQGPCVQLD 50
+C N G C +G+ G V +C PC + G CV D
Sbjct: 644 LCDTNPLNGQYICTCPQGFKGADCTEDVDECAMANSNPCEHAGKCVNTD 692
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 5 CICQDNTGGDNC-ERCARGYYGNALEGAVTDCK----QCPCPN--QGPCVQLDDDQVSN 56
C+C + GD+C E + + G+ + C CP G LDD +SN
Sbjct: 579 CVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISN 637
>UNIPROTKB|D4AA94 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
OrthoDB:EOG4CZBF1 IPI:IPI00776570 ProteinModelPortal:D4AA94
Ensembl:ENSRNOT00000055386 Uniprot:D4AA94
Length = 1193
Score = 154 (59.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 57/195 (29%), Positives = 80/195 (41%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPC-PNQGPCVQLD-------DDQV 54
C+C G++C C G +G + C+ C P G C+ L D
Sbjct: 653 CLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQDTC 712
Query: 55 SN--LGNRTRIRIKSALGGN--RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCNCN 109
S G +IR A G+ T G L+ SG C+ PCNC+
Sbjct: 713 SAGWYGTGCQIRCACANDGHCDPTTGRCSCAPGWTGLS-CQRACDSGHWGPDCIHPCNCS 771
Query: 110 -GHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
GH + CDA SG C+C+ G CE+ C +GYYG + E ++C C + C D
Sbjct: 772 AGHGN-CDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCE------QKCRCEHGAAC---D 821
Query: 168 DDQVVCSECPRGYGG 182
C+ CP G+ G
Sbjct: 822 HVSGACT-CPAGWRG 835
Score = 121 (47.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 53/198 (26%), Positives = 76/198 (38%)
Query: 4 RCICQDNTGGDNCER-CARGYYG-------NALEG-----AVTDCKQCPCPNQGP-CVQL 49
RC C G +C+R C G++G N G AV+ C +GP C Q
Sbjct: 739 RCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLCLCEAGYEGPRCEQS 798
Query: 50 DDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRC-VPCNC 108
+ R + + G A T ++ + H +G C CNC
Sbjct: 799 CRQGYYGPSCEQKCRCEHGAACDHVSG-ACTCPAGWRGSFCEHACPAGFFGLDCDSACNC 857
Query: 109 NGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCK-QCPCPNQGPCVQL 166
+ A CDA +G CIC G C ++C G+Y C+ C C + G C +L
Sbjct: 858 SAGAP-CDAVTGSCICPAGRWGPRCAQKCLPGHYA-------AGCQLNCSCLHGGICDRL 909
Query: 167 DDDQVVCSECPRGYGGEK 184
C CP G+ G+K
Sbjct: 910 TGH---CL-CPAGWTGDK 923
Score = 120 (47.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 29/85 (34%), Positives = 38/85 (44%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPC 163
C+C H ICD +G C+C GD C+ C RG++G A C Q C CP C
Sbjct: 898 CSCL-HGGICDRLTGHCLCPAGWTGDKCQSSCPRGWFGEA-------CAQRCLCPPNASC 949
Query: 164 VQLDDDQVVCSECPRGYGGEKMSPG 188
+ + C CP G+ G G
Sbjct: 950 HHVTGE---C-RCPPGFTGLSCEQG 970
Score = 74 (31.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C C G +CE C +G+YG K+C C N+G C +L
Sbjct: 478 CRCPPGVSGAHCEDGCPKGFYGKHCR------KKCHCANRGRCHRL 517
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGA---VTDCKQCPCPNQ 43
C + G C C RGY + + + DC PC Q
Sbjct: 240 CSHTSTGPLCT-CPRGYELDEDQKTCIDIDDCANSPCCQQ 278
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 10 NTGGDNCE---RCARGYYGNALEGA-VTDCKQCPCPNQGPCVQLDDDQ 53
NT G CE CA G+ G + + QC C G +LD+D+
Sbjct: 298 NTDGCGCEDVDECASGHGGCEHHCSNLAGSFQCFC-EAG--YRLDEDR 342
>RGD|70949 [details] [associations]
symbol:Dll1 "delta-like 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0001756 "somitogenesis" evidence=ISO] [GO:0001757 "somite
specification" evidence=IEA;ISO] [GO:0001947 "heart looping"
evidence=IEA;ISO] [GO:0005112 "Notch binding"
evidence=IEA;ISO;TAS;IPI] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA;ISO;TAS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO;NAS]
[GO:0007267 "cell-cell signaling" evidence=IEA;ISO] [GO:0007368
"determination of left/right symmetry" evidence=ISO] [GO:0007386
"compartment pattern specification" evidence=IEA;ISO] [GO:0007399
"nervous system development" evidence=NAS] [GO:0009912 "auditory
receptor cell fate commitment" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0045596 "negative regulation of cell
differentiation" evidence=ISO] [GO:0045608 "negative regulation of
auditory receptor cell differentiation" evidence=IEA;ISO]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA;ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048839 "inner ear development"
evidence=IEA;ISO] [GO:0050767 "regulation of neurogenesis"
evidence=ISO] [GO:0070986 "left/right axis specification"
evidence=IEA;ISO] [GO:0072014 "proximal tubule development"
evidence=IEA] [GO:0072070 "loop of Henle development" evidence=IEA]
[GO:0097150 "neuronal stem cell maintenance" evidence=IEA;ISO]
InterPro:IPR000742 InterPro:IPR001774 InterPro:IPR001881
InterPro:IPR011651 InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414
Pfam:PF07657 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051
SMART:SM00051 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:70949 GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111984
GO:GO:0031410 GO:GO:0007219 GO:GO:0005509 GO:GO:0007267
GO:GO:0005112 GO:GO:0045747 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007368 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0072014
GO:GO:0001709 GO:GO:0045638 GO:GO:0001757 CTD:28514 eggNOG:NOG249767
HOGENOM:HOG000267024 HOVERGEN:HBG007139 KO:K06051 OrthoDB:EOG469QT9
GO:GO:0007386 GO:GO:0072070 GO:GO:0045608 GO:GO:0097150
GO:GO:0009912 EMBL:U78889 IPI:IPI00206620 RefSeq:NP_114452.1
UniGene:Rn.10628 ProteinModelPortal:P97677 SMR:P97677 STRING:P97677
PRIDE:P97677 GeneID:84010 KEGG:rno:84010 UCSC:RGD:70949
InParanoid:P97677 NextBio:616537 Genevestigator:P97677
GermOnline:ENSRNOG00000014667 Uniprot:P97677
Length = 714
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/186 (30%), Positives = 66/186 (35%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-----GNRTRI 63
NTG G C GY G E V +C PC N G C L+D G +
Sbjct: 305 NTGQGSYTCSCRPGYTGANCELEVDECAPSPCRNGGSCTDLEDSYSCTCPPGFYGKVCEL 364
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYH-HEPTSGGAFSRCVPCNCNGHADICDAE--SG 120
+ G G R + GY H P F NC D+C + S
Sbjct: 365 SAMTCADGPCFNG---GRCSDNPDGGYTCHCPAGFSGF------NCEKKIDLCSSSPCSN 415
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D C RC G+ G E V DC PC N G C +D C+ CP GY
Sbjct: 416 GAKCVDLGNSYLC-RCQTGFSGRYCEDNVDDCASSPCANGGTCRDSVND-FSCT-CPPGY 472
Query: 181 GGEKMS 186
G S
Sbjct: 473 TGRNCS 478
Score = 105 (42.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 108 CNGHADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C + D C + + C+D+ +C C GY G V+ C+ PC N C Q
Sbjct: 439 CEDNVDDCASSPCANGGTCRDSVNDFSCT-CPPGYTGRNCSAPVSRCEHAPCHNGATCHQ 497
Query: 166 LDDDQVVCSECPRGYGG 182
+ +C EC +GYGG
Sbjct: 498 RGQ-RYMC-ECAQGYGG 512
Score = 104 (41.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 30/107 (28%), Positives = 38/107 (35%)
Query: 91 HHEPTSGGAFSR-----CVPCNCN-GHADI-CDAESGRCICQDNTGGDNCE--------R 135
HH+P GA C+C G+ C+ E C G +C
Sbjct: 293 HHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECAPSPCRNGGSCTDLEDSYSCT 352
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C G+YG E + C PC N G C D C CP G+ G
Sbjct: 353 CPPGFYGKVCELSAMTCADGPCFNGGRCSDNPDGGYTC-HCPAGFSG 398
Score = 100 (40.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 30/90 (33%), Positives = 40/90 (44%)
Query: 106 CNCN-GHADI-CDAESGRCI----CQD-----NTG-GDNCERCARGYYGNALEGAVTDCK 153
CNC G + C+ + C C++ NTG G C GY G E V +C
Sbjct: 273 CNCQEGWGGLFCNQDLNYCTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECA 332
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
PC N G C L+D C+ CP G+ G+
Sbjct: 333 PSPCRNGGSCTDLEDSYS-CT-CPPGFYGK 360
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C+ C R Y L G QC C
Sbjct: 242 CKCRVGWQGRYCDECIR--YPGCLHGTCQQPWQCNC 275
>UNIPROTKB|P97677 [details] [associations]
symbol:Dll1 "Delta-like protein 1" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07657
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:70949
GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111984 GO:GO:0031410
GO:GO:0007219 GO:GO:0005509 GO:GO:0007267 GO:GO:0005112
GO:GO:0045747 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007368
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0072014 GO:GO:0001709
GO:GO:0045638 GO:GO:0001757 CTD:28514 eggNOG:NOG249767
HOGENOM:HOG000267024 HOVERGEN:HBG007139 KO:K06051 OrthoDB:EOG469QT9
GO:GO:0007386 GO:GO:0072070 GO:GO:0045608 GO:GO:0097150
GO:GO:0009912 EMBL:U78889 IPI:IPI00206620 RefSeq:NP_114452.1
UniGene:Rn.10628 ProteinModelPortal:P97677 SMR:P97677 STRING:P97677
PRIDE:P97677 GeneID:84010 KEGG:rno:84010 UCSC:RGD:70949
InParanoid:P97677 NextBio:616537 Genevestigator:P97677
GermOnline:ENSRNOG00000014667 Uniprot:P97677
Length = 714
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 56/186 (30%), Positives = 66/186 (35%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-----GNRTRI 63
NTG G C GY G E V +C PC N G C L+D G +
Sbjct: 305 NTGQGSYTCSCRPGYTGANCELEVDECAPSPCRNGGSCTDLEDSYSCTCPPGFYGKVCEL 364
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYH-HEPTSGGAFSRCVPCNCNGHADICDAE--SG 120
+ G G R + GY H P F NC D+C + S
Sbjct: 365 SAMTCADGPCFNG---GRCSDNPDGGYTCHCPAGFSGF------NCEKKIDLCSSSPCSN 415
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D C RC G+ G E V DC PC N G C +D C+ CP GY
Sbjct: 416 GAKCVDLGNSYLC-RCQTGFSGRYCEDNVDDCASSPCANGGTCRDSVND-FSCT-CPPGY 472
Query: 181 GGEKMS 186
G S
Sbjct: 473 TGRNCS 478
Score = 105 (42.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 108 CNGHADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C + D C + + C+D+ +C C GY G V+ C+ PC N C Q
Sbjct: 439 CEDNVDDCASSPCANGGTCRDSVNDFSCT-CPPGYTGRNCSAPVSRCEHAPCHNGATCHQ 497
Query: 166 LDDDQVVCSECPRGYGG 182
+ +C EC +GYGG
Sbjct: 498 RGQ-RYMC-ECAQGYGG 512
Score = 104 (41.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 30/107 (28%), Positives = 38/107 (35%)
Query: 91 HHEPTSGGAFSR-----CVPCNCN-GHADI-CDAESGRCICQDNTGGDNCE--------R 135
HH+P GA C+C G+ C+ E C G +C
Sbjct: 293 HHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECAPSPCRNGGSCTDLEDSYSCT 352
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C G+YG E + C PC N G C D C CP G+ G
Sbjct: 353 CPPGFYGKVCELSAMTCADGPCFNGGRCSDNPDGGYTC-HCPAGFSG 398
Score = 100 (40.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 30/90 (33%), Positives = 40/90 (44%)
Query: 106 CNCN-GHADI-CDAESGRCI----CQD-----NTG-GDNCERCARGYYGNALEGAVTDCK 153
CNC G + C+ + C C++ NTG G C GY G E V +C
Sbjct: 273 CNCQEGWGGLFCNQDLNYCTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECA 332
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
PC N G C L+D C+ CP G+ G+
Sbjct: 333 PSPCRNGGSCTDLEDSYS-CT-CPPGFYGK 360
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C+ C R Y L G QC C
Sbjct: 242 CKCRVGWQGRYCDECIR--YPGCLHGTCQQPWQCNC 275
>ZFIN|ZDB-GENE-000329-4 [details] [associations]
symbol:notch2 "notch homolog 2" species:7955 "Danio
rerio" [GO:0030154 "cell differentiation" evidence=IEA] [GO:0050793
"regulation of developmental process" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IGI] [GO:0060325 "face morphogenesis" evidence=IGI]
[GO:0042246 "tissue regeneration" evidence=IEP] [GO:0001889 "liver
development" evidence=IGI] [GO:0001946 "lymphangiogenesis"
evidence=IMP] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152
ZFIN:ZDB-GENE-000329-4 GO:GO:0016021 GO:GO:0030154
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0001889
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001946 PROSITE:PS01186
GO:GO:0042246 PROSITE:PS00010 GO:GO:0050793 GO:GO:0060325
GO:GO:0060351 Pfam:PF12661 GeneTree:ENSGT00700000104305
SUPFAM:SSF90193 InterPro:IPR024600 Pfam:PF11936 InterPro:IPR022336
PRINTS:PR01985 EMBL:CT573380 EMBL:FP016062 IPI:IPI00997919
Ensembl:ENSDART00000032967 Ensembl:ENSDART00000123104
Uniprot:F1R9H8
Length = 2475
Score = 157 (60.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 53/184 (28%), Positives = 74/184 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-----GNRT 61
C D C CARG+ G E + +C+ PC NQG CV + V + G
Sbjct: 773 CNDRLNDYTCV-CARGFAGFNCEININECESNPCMNQGTCVDGVNSYVCHCKPPYTGKHC 831
Query: 62 RIR-IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
+ I A + RG+ Q T Y + SG ++C C
Sbjct: 832 LEKLIPCASQPCQRRGVC---QPSLDYTSYTCKCHSGWEGAQCTEDKDECKKSPCQ-NGA 887
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
RC+ + G CE C GY G+ + + DC PC N G CV + +C EC G+
Sbjct: 888 RCV--NIVGSYRCE-CPPGYSGDNCQTNIDDCSSNPCRNGGTCVD-KVGRYLC-ECRAGF 942
Query: 181 GGEK 184
GE+
Sbjct: 943 YGER 946
Score = 142 (55.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 52/190 (27%), Positives = 72/190 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNLGNRTRIRI 65
C D G +C C Y G E V C Q C N G C+Q + + + S T +
Sbjct: 1041 CIDGLGTFHCN-CPLMYNGKTCESMVNLCSQIKCQNGGTCIQKEINWRCSCQPGWTGLYC 1099
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYH--HEPTSGGAFSRCVPCNCN-GHA-DICDAESGR 121
+ +AL + + H H G C C G+ C+ E
Sbjct: 1100 D--IPSMSCHAVALNKGVAENMVCKHAGHCKNIGNTHQ----CECQKGYTGSYCETEIDE 1153
Query: 122 CI---------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
C+ C D GG +C +C G+ G E V +C+ PC N G C+ L +
Sbjct: 1154 CLSSPCRNGGTCVDYQGGYDC-KCKAGFQGVNCEYNVNECQSNPCRNGGTCIDLIN-HFS 1211
Query: 173 CSECPRGYGG 182
CS CP G G
Sbjct: 1212 CS-CPPGTKG 1220
Score = 138 (53.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 48/183 (26%), Positives = 67/183 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G CE C GY G+ + + DC PC N G CV D+V R +
Sbjct: 889 CVNIVGSYRCE-CPPGYSGDNCQTNIDDCSSNPCRNGGTCV----DKVG----RYLCECR 939
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPC--NCNGHADICDAESGRCI- 123
+ G R ++ G H +C P N DI D C+
Sbjct: 940 AGFYGERCEEEVDECASNPCWNGGHCTDYVNSYTCQCPPGYDGINCERDIPDCTETSCLN 999
Query: 124 ---CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D +C RC +G+ G + + +C PC N G C+ D CP Y
Sbjct: 1000 NGTCVDGINHFSC-RCRQGFSGQYCQFELNECDSHPCKNGGTCI--DGLGTFHCNCPLMY 1056
Query: 181 GGE 183
G+
Sbjct: 1057 NGK 1059
Score = 137 (53.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 53/196 (27%), Positives = 71/196 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D C C GY G + +C PC + G C +D+V+ + K
Sbjct: 660 CEDGINEYKCV-CEPGYTGERCADEINECSSNPCQSGGTC----EDKVNGF------KCK 708
Query: 67 SALGGNRTRG-LALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCICQ 125
+G T G L L+ H G C CD E C+
Sbjct: 709 CPVG---TYGPLCLSGADRCIRMPCRHGECIGKQEGYLCQCEPGWEGTNCDQEKNECLSN 765
Query: 126 DNTGGDNC-ER-------CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
G C +R CARG+ G E + +C+ PC NQG CV + VC C
Sbjct: 766 PCQNGGTCNDRLNDYTCVCARGFAGFNCEININECESNPCMNQGTCVD-GVNSYVC-HCK 823
Query: 178 RGYGG----EKMSPGA 189
Y G EK+ P A
Sbjct: 824 PPYTGKHCLEKLIPCA 839
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 49/186 (26%), Positives = 69/186 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--------- 57
C D G C C G+ G E + +C PC N G C+ DQVS
Sbjct: 472 CLDQIGDYTCI-CMPGFDGTHCENDINECLSSPCLNNGRCL----DQVSRFVCECPQGFT 526
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDA 117
G ++ I G + + GY E G C+ N N +
Sbjct: 527 GETCQVDIDECASTPCHNGAKCLDRPN----GYECECAEGFTGPLCME-NIND-CEPQPC 580
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
G+CI D +C+ C GY G + +C+ PC N G CV + + + C+ C
Sbjct: 581 HHGKCI--DGIATFHCD-CLPGYMGPICSEQIRECQSDPCQNGGRCVDMVN-RYQCN-CQ 635
Query: 178 RGYGGE 183
G GE
Sbjct: 636 PGTAGE 641
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 54/194 (27%), Positives = 72/194 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D GG +C +C G+ G E V +C+ PC N G C+ L +++
Sbjct: 1165 CVDYQGGYDC-KCKAGFQGVNCEYNVNECQSNPCRNGGTCIDL----INHFSC------- 1212
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV---PCNCN-GHA------DICD 116
S G T+GL + +GG V CNC G A D+ +
Sbjct: 1213 SCPPG--TKGLQCEVDVDECAPEFGPRCKNGGQCVDGVGRYTCNCPPGFAGEHCEGDVNE 1270
Query: 117 AESGRCI------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
SG C C C RC GY G E V C+ PC N G C
Sbjct: 1271 CRSGPCYSPGTIDCVPLINSYQC-RCRLGYTGQRCESMVDLCQSKPCHNNGRCTTNSSSV 1329
Query: 171 --VVCSECPRGYGG 182
+C+ CP G+ G
Sbjct: 1330 HGYICT-CPPGFSG 1342
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 50/188 (26%), Positives = 73/188 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D G C C G+ G EG V +C+ PC + G D V L N + R +
Sbjct: 1244 CVDGVGRYTCN-CPPGFAGEHCEGDVNECRSGPCYSPGTI-----DCVP-LINSYQCRCR 1296
Query: 67 SALGGNRTRG---LALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAES 119
G R L ++ H + + G C P NC G+ ++ S
Sbjct: 1297 LGYTGQRCESMVDLCQSKPCHNNGRCTTNSSSVHGYICTCPPGFSGFNC-GNYEMFPCAS 1355
Query: 120 GRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSE 175
RC+ C + C C G+ G E +T+ C C N G C+ + ++ C
Sbjct: 1356 LRCLNGGQCVEIKSRPQCH-CPVGFTGTHCE-MLTN--HCVCQNGGTCMPDESNKFSC-R 1410
Query: 176 CPRGYGGE 183
CP G+ GE
Sbjct: 1411 CPPGFSGE 1418
Score = 88 (36.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 26/75 (34%), Positives = 32/75 (42%)
Query: 108 CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
C+ H C G CI D G +C C Y G E V C Q C N G C+Q +
Sbjct: 1030 CDSHP--CK-NGGTCI--DGLGTFHCN-CPLMYNGKTCESMVNLCSQIKCQNGGTCIQKE 1083
Query: 168 DDQVVCSECPRGYGG 182
+ CS C G+ G
Sbjct: 1084 INWR-CS-CQPGWTG 1096
Score = 80 (33.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDD 51
C++ G C CA GY G E + +C PC N C+ Q+ D
Sbjct: 434 CKNTEGSFTCN-CAPGYTGPRCEQDINECGSNPCQNDATCLDQIGD 478
>UNIPROTKB|E2QZY0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277 KO:K06845
OMA:RSQDFGK EMBL:AAEX03009952 EMBL:AAEX03009953 RefSeq:XP_532655.2
Ensembl:ENSCAFT00000010328 GeneID:475431 KEGG:cfa:475431
Uniprot:E2QZY0
Length = 628
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 52/186 (27%), Positives = 74/186 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT G +C+ CA Y E G+ +C+ C C D +
Sbjct: 292 KCMCKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPKECRTCKCNGHADTCHFDINVWEAS 351
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHE---PTSGGAFSRCVPCNCN--G 110
GNR+ GG T H Q G++ + P S A C C+C+ G
Sbjct: 352 GNRS--------GGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFS--APDACKMCSCHPVG 401
Query: 111 HADI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
A + CD +G C C+ G +C+RC GY+G G C+ C C G C
Sbjct: 402 SAALPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYG----CRPCDCA--GSC 455
Query: 164 VQLDDD 169
L D
Sbjct: 456 DPLTGD 461
>UNIPROTKB|F1SQR3 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060668 "regulation of branching involved in salivary
gland morphogenesis by extracellular matrix-epithelial cell
signaling" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 EMBL:CU442719 RefSeq:XP_003481795.1
Ensembl:ENSSSCT00000000980 GeneID:100516554 KEGG:ssc:100516554
Uniprot:F1SQR3
Length = 628
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 52/186 (27%), Positives = 74/186 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALE------GAVTDCKQCPCPNQGPCVQLDDDQVSNL 57
+C+C+ NT G +C+ CA Y E G+ +C+ C C D +
Sbjct: 292 KCMCKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPKECRTCKCNGHADACHFDINVWEAS 351
Query: 58 GNRTRIRIKSALGGNRTRGLALTRQTHYQLT--GYHHE---PTSGGAFSRCVPCNCN--G 110
GNR+ GG T H Q G++ + P S A C C+C+ G
Sbjct: 352 GNRS--------GGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFS--APDACKLCSCHPVG 401
Query: 111 HADI-------CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
A + CD +G C C+ G +C+RC GY+G G C+ C C G C
Sbjct: 402 SAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGEYG----CRPCDCA--GSC 455
Query: 164 VQLDDD 169
L D
Sbjct: 456 DPLTGD 461
>UNIPROTKB|J9NS51 [details] [associations]
symbol:NOTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0030154 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
Pfam:PF12661 GeneTree:ENSGT00700000104305 SUPFAM:SSF90193
InterPro:IPR024600 Pfam:PF11936 EMBL:AAEX03006755 EMBL:AAEX03006746
EMBL:AAEX03006747 EMBL:AAEX03006748 EMBL:AAEX03006749
EMBL:AAEX03006750 EMBL:AAEX03006751 EMBL:AAEX03006752
EMBL:AAEX03006753 EMBL:AAEX03006754 Ensembl:ENSCAFT00000049964
Uniprot:J9NS51
Length = 2272
Score = 156 (60.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/185 (27%), Positives = 71/185 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 467 CRDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGSCI----DDVA--GYKCNCPLP 519
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + G E +FS C+ C C+ + C+
Sbjct: 520 YT-GATCEVVLAPCAPSPCRNGGACKESEDYESFS-CI-CPTGWQGQTCEVDINECVKTP 576
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ GG C C GY G E V DC+ PC N G C D +C
Sbjct: 577 CRNGASCQNTNGGYRCH-CRAGYTGRNCETDVDDCRPNPCHNGGSCT--DGVNTAFCDCL 633
Query: 178 RGYGG 182
G+ G
Sbjct: 634 PGFQG 638
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 55/188 (29%), Positives = 80/188 (42%)
Query: 5 CICQDNTGGDNCER----CARG--YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSN 56
C+C + G++C CA ++G V C CP+ G L+D +SN
Sbjct: 20 CVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASF-YCECPHGRTGLLCHLNDACISN 78
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICD 116
N S N G A+ +GY +G A S+ V C+ A+ C+
Sbjct: 79 PCNEG-----SNCDTNPVNGKAICTCP----SGY-----TGPACSQDVD-ECSLGANPCE 123
Query: 117 AESGRCICQDNT-GGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVVCS 174
+G+CI NT G C+ C +GY G E V +C PC N C+ Q+ + Q +C
Sbjct: 124 -HAGKCI---NTLGSFECQ-CLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICM 178
Query: 175 ECPRGYGG 182
P GY G
Sbjct: 179 --P-GYEG 183
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 44/182 (24%), Positives = 63/182 (34%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-----GNR 60
+C+D C C GY G+ E + +C PC + G C D+ + + G
Sbjct: 278 VCKDGVATFTC-LCQPGYTGHHCESNINECHSQPCRHGGTCQDRDNAYLCSCLKGTTGPN 336
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
+ G L R Y+ EP G+ C G+ C G
Sbjct: 337 CETNLDDCASSPCESGTCLDRIDGYECAC---EPGYTGSMCNVNIDECAGNP--CH-HGG 390
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C +D C RC GY+G V +C PC + G C D +C G+
Sbjct: 391 TC--EDGINSFMC-RCPEGYHGPTCLSEVNECSSNPCIH-GAC--RDSLNGYKCDCDPGW 444
Query: 181 GG 182
G
Sbjct: 445 SG 446
Score = 117 (46.2 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +CE C GY+G + +C PC N G C+
Sbjct: 841 CEDQVDECSPSPCQNG-ATCTDYPGGYSCE-CVAGYHGVNCSEEMNECLSHPCQNGGTCI 898
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 899 DLINTYK-CS-CPRGTQG 914
Score = 100 (40.3 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVVCSECPRGYG 181
C D GG +C C G+ G EG V +C PC +G CVQ +D C EC G+
Sbjct: 943 CVDQVGGYSCT-CPPGFVGERCEGDVNECLSNPCDIRGTQNCVQRVND-FYC-ECRAGHT 999
Query: 182 GEK 184
G +
Sbjct: 1000 GRR 1002
Score = 100 (40.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S C+ C D+ G C C Y G E + C PC N G
Sbjct: 486 NCQTNINEC--ASNPCLNQGSCIDDVAGYKCN-CPLPYTGATCEVVLAPCAPSPCRNGGA 542
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C + +D + CP G+ G+
Sbjct: 543 CKESEDYESFSCICPTGWQGQ 563
Score = 93 (37.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C D GG +CE C GY+G + +C PC N G C+ L
Sbjct: 859 CTDYPGGYSCE-CVAGYHGVNCSEEMNECLSHPCQNGGTCIDL 900
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C D +C RC GY G+ E V +C PC N C
Sbjct: 820 LCMDAGNTHHC-RCQAGYTGSYCEDQVDECSPSPCQNGATC 859
Score = 62 (26.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG NC C G+ G + DC C + C
Sbjct: 11 CHNTHGGYNCV-CVNGWTGEDCSENIDDCASAACFHGATC 49
>RGD|621188 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
CTD:1953 HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:AB011532
IPI:IPI00207575 PIR:T13954 RefSeq:NP_075244.1 UniGene:Rn.195598
ProteinModelPortal:O88281 PRIDE:O88281 GeneID:65049 KEGG:rno:65049
UCSC:RGD:621188 InParanoid:O88281 NextBio:613892
Genevestigator:O88281 Uniprot:O88281
Length = 1574
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/195 (29%), Positives = 80/195 (41%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPC-PNQGPCVQLD-------DDQV 54
C+C G++C C G +G + C+ C P G C+ L D
Sbjct: 762 CLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQDTC 821
Query: 55 SN--LGNRTRIRIKSALGGN--RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCNCN 109
S G +IR A G+ T G L+ SG C+ PCNC+
Sbjct: 822 SAGWYGTGCQIRCACANDGHCDPTTGRCSCAPGWTGLS-CQRACDSGHWGPDCIHPCNCS 880
Query: 110 -GHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
GH + CDA SG C+C+ G CE+ C +GYYG + E ++C C + C D
Sbjct: 881 AGHGN-CDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCE------QKCRCEHGAAC---D 930
Query: 168 DDQVVCSECPRGYGG 182
C+ CP G+ G
Sbjct: 931 HVSGACT-CPAGWRG 944
Score = 107 (42.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 32/92 (34%), Positives = 35/92 (38%)
Query: 98 GAFSR-CVP-CNCNGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQ 154
G F + C C C G CD SG C C G C +RC G YG E
Sbjct: 1212 GTFGKDCEHLCQCPGETWACDPASGVCTCAAGYHGTGCLQRCPSGRYGPGCEHI------ 1265
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186
C C N G C D C CP G+ G S
Sbjct: 1266 CKCLNGGTC---DPATGACY-CPAGFLGADCS 1293
Score = 100 (40.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/79 (32%), Positives = 34/79 (43%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPC 163
C C A C +G C C G +CE+ C RG++G A C Q C CP C
Sbjct: 1136 CACRKGAS-CHHVTGACFCPPGWRGPHCEQACPRGWFGEA-------CAQRCLCPTNASC 1187
Query: 164 VQLDDDQVVCSECPRGYGG 182
+ + C CP G+ G
Sbjct: 1188 HHVTGE---C-RCPPGFTG 1202
Score = 91 (37.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 30/98 (30%), Positives = 38/98 (38%)
Query: 96 SGGAFSRCVP-CNCNGHADI-CDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDC 152
SG C+ CNC H + CD SG C+C G C+ C RG +G DC
Sbjct: 1470 SGSFGDGCLQQCNC--HTGVPCDPISGLCLCPPGRTGAACDLDCRRGRFGPGC-ALRCDC 1526
Query: 153 KQ-CPC-PNQGPCVQLDDDQ-VVCSECPRGYGGEKMSP 187
C P G C +D C E P + +P
Sbjct: 1527 GGGADCDPISGQCHCVDSYMGPTCREVPTQISSSRPAP 1564
Score = 74 (31.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C C G +CE C +G+YG K+C C N+G C +L
Sbjct: 587 CRCPPGVSGAHCEDGCPKGFYGKHCR------KKCHCANRGRCHRL 626
Score = 71 (30.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPC 46
C C G +CE+ C RG++G A C Q C CP C
Sbjct: 1151 CFCPPGWRGPHCEQACPRGWFGEA-------CAQRCLCPTNASC 1187
>UNIPROTKB|O88281 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621188 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:AB011532 IPI:IPI00207575 PIR:T13954
RefSeq:NP_075244.1 UniGene:Rn.195598 ProteinModelPortal:O88281
PRIDE:O88281 GeneID:65049 KEGG:rno:65049 UCSC:RGD:621188
InParanoid:O88281 NextBio:613892 Genevestigator:O88281
Uniprot:O88281
Length = 1574
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 57/195 (29%), Positives = 80/195 (41%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPC-PNQGPCVQLD-------DDQV 54
C+C G++C C G +G + C+ C P G C+ L D
Sbjct: 762 CLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCNPETGTCLCLPGFVGSRCQDTC 821
Query: 55 SN--LGNRTRIRIKSALGGN--RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCNCN 109
S G +IR A G+ T G L+ SG C+ PCNC+
Sbjct: 822 SAGWYGTGCQIRCACANDGHCDPTTGRCSCAPGWTGLS-CQRACDSGHWGPDCIHPCNCS 880
Query: 110 -GHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
GH + CDA SG C+C+ G CE+ C +GYYG + E ++C C + C D
Sbjct: 881 AGHGN-CDAVSGLCLCEAGYEGPRCEQSCRQGYYGPSCE------QKCRCEHGAAC---D 930
Query: 168 DDQVVCSECPRGYGG 182
C+ CP G+ G
Sbjct: 931 HVSGACT-CPAGWRG 944
Score = 107 (42.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 32/92 (34%), Positives = 35/92 (38%)
Query: 98 GAFSR-CVP-CNCNGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQ 154
G F + C C C G CD SG C C G C +RC G YG E
Sbjct: 1212 GTFGKDCEHLCQCPGETWACDPASGVCTCAAGYHGTGCLQRCPSGRYGPGCEHI------ 1265
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186
C C N G C D C CP G+ G S
Sbjct: 1266 CKCLNGGTC---DPATGACY-CPAGFLGADCS 1293
Score = 100 (40.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/79 (32%), Positives = 34/79 (43%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPC 163
C C A C +G C C G +CE+ C RG++G A C Q C CP C
Sbjct: 1136 CACRKGAS-CHHVTGACFCPPGWRGPHCEQACPRGWFGEA-------CAQRCLCPTNASC 1187
Query: 164 VQLDDDQVVCSECPRGYGG 182
+ + C CP G+ G
Sbjct: 1188 HHVTGE---C-RCPPGFTG 1202
Score = 91 (37.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 30/98 (30%), Positives = 38/98 (38%)
Query: 96 SGGAFSRCVP-CNCNGHADI-CDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDC 152
SG C+ CNC H + CD SG C+C G C+ C RG +G DC
Sbjct: 1470 SGSFGDGCLQQCNC--HTGVPCDPISGLCLCPPGRTGAACDLDCRRGRFGPGC-ALRCDC 1526
Query: 153 KQ-CPC-PNQGPCVQLDDDQ-VVCSECPRGYGGEKMSP 187
C P G C +D C E P + +P
Sbjct: 1527 GGGADCDPISGQCHCVDSYMGPTCREVPTQISSSRPAP 1564
Score = 74 (31.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C C G +CE C +G+YG K+C C N+G C +L
Sbjct: 587 CRCPPGVSGAHCEDGCPKGFYGKHCR------KKCHCANRGRCHRL 626
Score = 71 (30.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPC 46
C C G +CE+ C RG++G A C Q C CP C
Sbjct: 1151 CFCPPGWRGPHCEQACPRGWFGEA-------CAQRCLCPTNASC 1187
>UNIPROTKB|F1PDC7 [details] [associations]
symbol:NOTCH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050793 "regulation of developmental process"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275
GO:GO:0030154 GO:GO:0006355 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 InterPro:IPR024600
Pfam:PF11936 OMA:HGGYNCV EMBL:AAEX03006755 EMBL:AAEX03006746
EMBL:AAEX03006747 EMBL:AAEX03006748 EMBL:AAEX03006749
EMBL:AAEX03006750 EMBL:AAEX03006751 EMBL:AAEX03006752
EMBL:AAEX03006753 EMBL:AAEX03006754 Ensembl:ENSCAFT00000031242
Uniprot:F1PDC7
Length = 2555
Score = 156 (60.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/185 (27%), Positives = 71/185 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 763 CRDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGSCI----DDVA--GYKCNCPLP 815
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + G E +FS C+ C C+ + C+
Sbjct: 816 YT-GATCEVVLAPCAPSPCRNGGACKESEDYESFS-CI-CPTGWQGQTCEVDINECVKTP 872
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ GG C C GY G E V DC+ PC N G C D +C
Sbjct: 873 CRNGASCQNTNGGYRCH-CRAGYTGRNCETDVDDCRPNPCHNGGSCT--DGVNTAFCDCL 929
Query: 178 RGYGG 182
G+ G
Sbjct: 930 PGFQG 934
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 55/188 (29%), Positives = 80/188 (42%)
Query: 5 CICQDNTGGDNCER----CARG--YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSN 56
C+C + G++C CA ++G V C CP+ G L+D +SN
Sbjct: 316 CVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASF-YCECPHGRTGLLCHLNDACISN 374
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICD 116
N S N G A+ +GY +G A S+ V C+ A+ C+
Sbjct: 375 PCNEG-----SNCDTNPVNGKAICTCP----SGY-----TGPACSQDVD-ECSLGANPCE 419
Query: 117 AESGRCICQDNT-GGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVVCS 174
+G+CI NT G C+ C +GY G E V +C PC N C+ Q+ + Q +C
Sbjct: 420 -HAGKCI---NTLGSFECQ-CLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICM 474
Query: 175 ECPRGYGG 182
P GY G
Sbjct: 475 --P-GYEG 479
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 44/182 (24%), Positives = 63/182 (34%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-----GNR 60
+C+D C C GY G+ E + +C PC + G C D+ + + G
Sbjct: 574 VCKDGVATFTC-LCQPGYTGHHCESNINECHSQPCRHGGTCQDRDNAYLCSCLKGTTGPN 632
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESG 120
+ G L R Y+ EP G+ C G+ C G
Sbjct: 633 CETNLDDCASSPCESGTCLDRIDGYECAC---EPGYTGSMCNVNIDECAGNP--CH-HGG 686
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C +D C RC GY+G V +C PC + G C D +C G+
Sbjct: 687 TC--EDGINSFMC-RCPEGYHGPTCLSEVNECSSNPCIH-GAC--RDSLNGYKCDCDPGW 740
Query: 181 GG 182
G
Sbjct: 741 SG 742
Score = 117 (46.2 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +CE C GY+G + +C PC N G C+
Sbjct: 1137 CEDQVDECSPSPCQNG-ATCTDYPGGYSCE-CVAGYHGVNCSEEMNECLSHPCQNGGTCI 1194
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1195 DLINTYK-CS-CPRGTQG 1210
Score = 100 (40.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVVCSECPRGYG 181
C D GG +C C G+ G EG V +C PC +G CVQ +D C EC G+
Sbjct: 1239 CVDQVGGYSCT-CPPGFVGERCEGDVNECLSNPCDIRGTQNCVQRVND-FYC-ECRAGHT 1295
Query: 182 GEK 184
G +
Sbjct: 1296 GRR 1298
Score = 100 (40.3 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S C+ C D+ G C C Y G E + C PC N G
Sbjct: 782 NCQTNINEC--ASNPCLNQGSCIDDVAGYKCN-CPLPYTGATCEVVLAPCAPSPCRNGGA 838
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C + +D + CP G+ G+
Sbjct: 839 CKESEDYESFSCICPTGWQGQ 859
Score = 93 (37.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C D GG +CE C GY+G + +C PC N G C+ L
Sbjct: 1155 CTDYPGGYSCE-CVAGYHGVNCSEEMNECLSHPCQNGGTCIDL 1196
Score = 80 (33.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C D +C RC GY G+ E V +C PC N C
Sbjct: 1116 LCMDAGNTHHC-RCQAGYTGSYCEDQVDECSPSPCQNGATC 1155
Score = 62 (26.9 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG NC C G+ G + DC C + C
Sbjct: 307 CHNTHGGYNCV-CVNGWTGEDCSENIDDCASAACFHGATC 345
>UNIPROTKB|B0S882 [details] [associations]
symbol:NOTCH4 "Notch 4 intracellular domain" species:9606
"Homo sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0030154 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793 Pfam:PF12661
EMBL:BX927239 SUPFAM:SSF90193 HOVERGEN:HBG052650 HGNC:HGNC:7884
InterPro:IPR022355 PRINTS:PR01987 IPI:IPI00893634 SMR:B0S882
Ensembl:ENST00000454571 Uniprot:B0S882
Length = 2002
Score = 140 (54.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 48/190 (25%), Positives = 69/190 (36%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNL----G 58
R CQD+ G C C GY G + + + C Q PCP C+Q L G
Sbjct: 817 RATCQDSPQGPRC-LCPTGYTGGSCQTLMDLCAQKPCPRNSHCLQTGPSFHCLCLQGWTG 875
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADI 114
+ + S ++G+ ++ H G + F C P C H +
Sbjct: 876 PLCNLPLSSCQKAALSQGIDVSSLCH---NGGLCVDSGPSYFCHCPPGFQGSLCQDHVNP 932
Query: 115 CDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
C++ C G C+ CA GY G + C+ PC N G C
Sbjct: 933 CESRPCQNGATCMAQPSGYLCQ-CAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGG-FH 990
Query: 173 CSECPRGYGG 182
C+ CP G+ G
Sbjct: 991 CA-CPPGFVG 999
Score = 106 (42.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 33/105 (31%), Positives = 41/105 (39%)
Query: 87 LTGYHHEPTSGGAFSRCVPCN----CNGHADICDAESGRCI----CQDNTGGDNCERCAR 138
L G P+ GG + C P + C D C S C C + G +C CA
Sbjct: 738 LNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYC--VSAPCFNGGTCVNRPGTFSC-LCAM 794
Query: 139 GYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
G+ G EG + C PC N+ C D Q CP GY G
Sbjct: 795 GFQGPRCEGKLRPSCADSPCRNRATCQ--DSPQGPRCLCPTGYTG 837
Score = 93 (37.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 29/91 (31%), Positives = 34/91 (37%)
Query: 101 SRCVPCNCNGHADICDAESGRCI---------CQDNTGGDNCERCARGYYGNALEGAVTD 151
S CV C+ C+AE G CI C G NC C GY G +T
Sbjct: 674 SSCV-CDVGWTGPECEAELGGCISAPCAHGGTCYPQPSGYNCT-CPTGYTGPTCSEEMTA 731
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C PC N G C C+ CP + G
Sbjct: 732 CHSGPCLNGGSC-NPSPGGYYCT-CPPSHTG 760
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/103 (27%), Positives = 37/103 (35%)
Query: 94 PTSGGAFSRCVP----CNCNGHADIC-DAE---SGRCICQDNTGGDNCERCARGYYGNAL 145
P GG C P C G D C D +G C C+ C G+ G
Sbjct: 984 PKPGGFHCACPPGFVGLRCEGDVDECLDQPCHPTGTAACHSLANAFYCQ-CLPGHTGQWC 1042
Query: 146 EGAVTDCKQCPCPNQGPCVQLDDDQV--VCSECPRGYGGEKMS 186
E + C PC + G C + +C CP+G+ G S
Sbjct: 1043 EVEIDPCHSQPCFHGGTCEATAGSPLGFIC-HCPKGFEGPTCS 1084
Score = 86 (35.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 98 GAFSRCVPC----NCNGHADICDAES--GRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
G +C P NC+ D C ++ C GG +C C G+ G EG V +
Sbjct: 950 GYLCQCAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGGFHCA-CPPGFVGLRCEGDVDE 1008
Query: 152 CKQCPCPNQGP--CVQLDDDQVVCSECPRGYGGE 183
C PC G C L + C +C G+ G+
Sbjct: 1009 CLDQPCHPTGTAACHSLAN-AFYC-QCLPGHTGQ 1040
Score = 79 (32.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
CQD G +C +C G+ G + V +C PCP C+ L
Sbjct: 565 CQDQPGAFHC-KCLPGFEGPRCQTEVDECLSDPCPVGASCLDL 606
Score = 76 (31.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D G C C G+ G E + +C+ PC N G C
Sbjct: 527 CHDLLNGFQCI-CLPGFSGTRCEEDIDECRSSPCANGGQC 565
Score = 72 (30.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C G NC C GY G +T C PC N G C
Sbjct: 705 CYPQPSGYNCT-CPTGYTGPTCSEEMTACHSGPCLNGGSC 743
Score = 54 (24.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 5 CICQDNTGG-----DNCE----RCAR-------GYYGNALEGAVTDCKQCPCPNQGPC 46
C+C D + G DNC C R G+ G E + C PC + G C
Sbjct: 648 CLCPDGSPGCAPPEDNCTCHHGHCQRSSCVCDVGWTGPECEAELGGCISAPCAHGGTC 705
Score = 43 (20.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 5 CICQDNTGGDNCE 17
C+C GG +CE
Sbjct: 340 CVCVSGWGGTSCE 352
Score = 37 (18.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 5 CICQDNTGGDNCER 18
C+CQ G C +
Sbjct: 417 CLCQPGYSGPTCHQ 430
>UNIPROTKB|Q99466 [details] [associations]
symbol:NOTCH4 "Neurogenic locus notch homolog protein 4"
species:9606 "Homo sapiens" [GO:0001886 "endothelial cell
morphogenesis" evidence=IEA] [GO:0001763 "morphogenesis of a
branching structure" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0001569 "patterning of blood vessels"
evidence=ISS] [GO:0045602 "negative regulation of endothelial cell
differentiation" evidence=ISS] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=NAS]
[GO:0045596 "negative regulation of cell differentiation"
evidence=NAS] [GO:0009986 "cell surface" evidence=IDA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0005509 "calcium
ion binding" evidence=TAS] [GO:0001709 "cell fate determination"
evidence=TAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030097 "hemopoiesis" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0030879 "mammary gland
development" evidence=IDA] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0007220 "Notch receptor processing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0007221 "positive
regulation of transcription of Notch receptor target" evidence=TAS]
Reactome:REACT_2001 Reactome:REACT_691 Reactome:REACT_71
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR011656
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023 Pfam:PF00066
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0005576 GO:GO:0005654 GO:GO:0009986 GO:GO:0000139
GO:GO:0005887 GO:GO:0005789 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0009790 GO:GO:0045602 GO:GO:0001569 PROSITE:PS01186
GO:GO:0007220 GO:GO:0046982 GO:GO:0030097 PROSITE:PS00010
GO:GO:0006367 GO:GO:0001709 EMBL:AL662884 GO:GO:0030879
Reactome:REACT_2155 Pfam:PF12661 EMBL:BX284927 GO:GO:0001886
EMBL:BX284686 EMBL:CR933878 EMBL:CR812478 SUPFAM:SSF90193
GermOnline:ENSG00000204301 HOVERGEN:HBG052650 KO:K02599
GO:GO:0007221 EMBL:D63395 EMBL:D86566 EMBL:U95299 EMBL:U89335
EMBL:AB023961 EMBL:AB024520 EMBL:AB024578 IPI:IPI00785109
IPI:IPI00829649 IPI:IPI00942401 RefSeq:NP_004548.3
UniGene:Hs.436100 ProteinModelPortal:Q99466 SMR:Q99466
STRING:Q99466 PhosphoSite:Q99466 DMDM:20139103 PaxDb:Q99466
PRIDE:Q99466 Ensembl:ENST00000375023 Ensembl:ENST00000425600
Ensembl:ENST00000439349 Ensembl:ENST00000457094 GeneID:4855
KEGG:hsa:4855 UCSC:uc003obb.3 CTD:4855 GeneCards:GC06M032231
HGNC:HGNC:7884 HPA:CAB012331 MIM:164951 neXtProt:NX_Q99466
PharmGKB:PA31686 InParanoid:Q99466 OMA:ACPQAHT OrthoDB:EOG437RD0
GenomeRNAi:4855 NextBio:18702 ArrayExpress:Q99466 Bgee:Q99466
CleanEx:HS_NOTCH4 Genevestigator:Q99466 InterPro:IPR022355
PRINTS:PR01987 Uniprot:Q99466
Length = 2003
Score = 140 (54.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 48/190 (25%), Positives = 69/190 (36%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNL----G 58
R CQD+ G C C GY G + + + C Q PCP C+Q L G
Sbjct: 818 RATCQDSPQGPRC-LCPTGYTGGSCQTLMDLCAQKPCPRNSHCLQTGPSFHCLCLQGWTG 876
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADI 114
+ + S ++G+ ++ H G + F C P C H +
Sbjct: 877 PLCNLPLSSCQKAALSQGIDVSSLCH---NGGLCVDSGPSYFCHCPPGFQGSLCQDHVNP 933
Query: 115 CDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
C++ C G C+ CA GY G + C+ PC N G C
Sbjct: 934 CESRPCQNGATCMAQPSGYLCQ-CAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGG-FH 991
Query: 173 CSECPRGYGG 182
C+ CP G+ G
Sbjct: 992 CA-CPPGFVG 1000
Score = 106 (42.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 33/105 (31%), Positives = 41/105 (39%)
Query: 87 LTGYHHEPTSGGAFSRCVPCN----CNGHADICDAESGRCI----CQDNTGGDNCERCAR 138
L G P+ GG + C P + C D C S C C + G +C CA
Sbjct: 739 LNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYC--VSAPCFNGGTCVNRPGTFSC-LCAM 795
Query: 139 GYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
G+ G EG + C PC N+ C D Q CP GY G
Sbjct: 796 GFQGPRCEGKLRPSCADSPCRNRATCQ--DSPQGPRCLCPTGYTG 838
Score = 93 (37.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 29/91 (31%), Positives = 34/91 (37%)
Query: 101 SRCVPCNCNGHADICDAESGRCI---------CQDNTGGDNCERCARGYYGNALEGAVTD 151
S CV C+ C+AE G CI C G NC C GY G +T
Sbjct: 675 SSCV-CDVGWTGPECEAELGGCISAPCAHGGTCYPQPSGYNCT-CPTGYTGPTCSEEMTA 732
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C PC N G C C+ CP + G
Sbjct: 733 CHSGPCLNGGSC-NPSPGGYYCT-CPPSHTG 761
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/103 (27%), Positives = 37/103 (35%)
Query: 94 PTSGGAFSRCVP----CNCNGHADIC-DAE---SGRCICQDNTGGDNCERCARGYYGNAL 145
P GG C P C G D C D +G C C+ C G+ G
Sbjct: 985 PKPGGFHCACPPGFVGLRCEGDVDECLDQPCHPTGTAACHSLANAFYCQ-CLPGHTGQWC 1043
Query: 146 EGAVTDCKQCPCPNQGPCVQLDDDQV--VCSECPRGYGGEKMS 186
E + C PC + G C + +C CP+G+ G S
Sbjct: 1044 EVEIDPCHSQPCFHGGTCEATAGSPLGFIC-HCPKGFEGPTCS 1085
Score = 86 (35.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 98 GAFSRCVPC----NCNGHADICDAES--GRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
G +C P NC+ D C ++ C GG +C C G+ G EG V +
Sbjct: 951 GYLCQCAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGGFHCA-CPPGFVGLRCEGDVDE 1009
Query: 152 CKQCPCPNQGP--CVQLDDDQVVCSECPRGYGGE 183
C PC G C L + C +C G+ G+
Sbjct: 1010 CLDQPCHPTGTAACHSLAN-AFYC-QCLPGHTGQ 1041
Score = 79 (32.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
CQD G +C +C G+ G + V +C PCP C+ L
Sbjct: 566 CQDQPGAFHC-KCLPGFEGPRCQTEVDECLSDPCPVGASCLDL 607
Score = 76 (31.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D G C C G+ G E + +C+ PC N G C
Sbjct: 528 CHDLLNGFQCI-CLPGFSGTRCEEDIDECRSSPCANGGQC 566
Score = 72 (30.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C G NC C GY G +T C PC N G C
Sbjct: 706 CYPQPSGYNCT-CPTGYTGPTCSEEMTACHSGPCLNGGSC 744
Score = 54 (24.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 5 CICQDNTGG-----DNCE----RCAR-------GYYGNALEGAVTDCKQCPCPNQGPC 46
C+C D + G DNC C R G+ G E + C PC + G C
Sbjct: 649 CLCPDGSPGCAPPEDNCTCHHGHCQRSSCVCDVGWTGPECEAELGGCISAPCAHGGTC 706
Score = 43 (20.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 5 CICQDNTGGDNCE 17
C+C GG +CE
Sbjct: 341 CVCVSGWGGTSCE 353
Score = 37 (18.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 5 CICQDNTGGDNCER 18
C+CQ G C +
Sbjct: 418 CLCQPGYSGPTCHQ 431
>UNIPROTKB|Q5STG5 [details] [associations]
symbol:NOTCH4 "Notch 4 intracellular domain" species:9606
"Homo sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0030154 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793 Pfam:PF12661
SUPFAM:SSF90193 EMBL:AL662830 HOVERGEN:HBG052650 HGNC:HGNC:7884
InterPro:IPR022355 PRINTS:PR01987 IPI:IPI00829858
ProteinModelPortal:Q5STG5 SMR:Q5STG5 PaxDb:Q5STG5 PRIDE:Q5STG5
Ensembl:ENST00000437843 ArrayExpress:Q5STG5 Uniprot:Q5STG5
Length = 2005
Score = 140 (54.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 48/190 (25%), Positives = 69/190 (36%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNL----G 58
R CQD+ G C C GY G + + + C Q PCP C+Q L G
Sbjct: 820 RATCQDSPQGPRC-LCPTGYTGGSCQTLMDLCAQKPCPRNSHCLQTGPSFHCLCLQGWTG 878
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADI 114
+ + S ++G+ ++ H G + F C P C H +
Sbjct: 879 PLCNLPLSSCQKAALSQGIDVSSLCH---NGGLCVDSGPSYFCHCPPGFQGSLCQDHVNP 935
Query: 115 CDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
C++ C G C+ CA GY G + C+ PC N G C
Sbjct: 936 CESRPCQNGATCMAQPSGYLCQ-CAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGG-FH 993
Query: 173 CSECPRGYGG 182
C+ CP G+ G
Sbjct: 994 CA-CPPGFVG 1002
Score = 106 (42.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 33/105 (31%), Positives = 41/105 (39%)
Query: 87 LTGYHHEPTSGGAFSRCVPCN----CNGHADICDAESGRCI----CQDNTGGDNCERCAR 138
L G P+ GG + C P + C D C S C C + G +C CA
Sbjct: 741 LNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYC--VSAPCFNGGTCVNRPGTFSC-LCAM 797
Query: 139 GYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
G+ G EG + C PC N+ C D Q CP GY G
Sbjct: 798 GFQGPRCEGKLRPSCADSPCRNRATCQ--DSPQGPRCLCPTGYTG 840
Score = 93 (37.8 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 29/91 (31%), Positives = 34/91 (37%)
Query: 101 SRCVPCNCNGHADICDAESGRCI---------CQDNTGGDNCERCARGYYGNALEGAVTD 151
S CV C+ C+AE G CI C G NC C GY G +T
Sbjct: 677 SSCV-CDVGWTGPECEAELGGCISAPCAHGGTCYPQPSGYNCT-CPTGYTGPTCSEEMTA 734
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C PC N G C C+ CP + G
Sbjct: 735 CHSGPCLNGGSC-NPSPGGYYCT-CPPSHTG 763
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/103 (27%), Positives = 37/103 (35%)
Query: 94 PTSGGAFSRCVP----CNCNGHADIC-DAE---SGRCICQDNTGGDNCERCARGYYGNAL 145
P GG C P C G D C D +G C C+ C G+ G
Sbjct: 987 PKPGGFHCACPPGFVGLRCEGDVDECLDQPCHPTGTAACHSLANAFYCQ-CLPGHTGQWC 1045
Query: 146 EGAVTDCKQCPCPNQGPCVQLDDDQV--VCSECPRGYGGEKMS 186
E + C PC + G C + +C CP+G+ G S
Sbjct: 1046 EVEIDPCHSQPCFHGGTCEATAGSPLGFIC-HCPKGFEGPTCS 1087
Score = 86 (35.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/94 (28%), Positives = 38/94 (40%)
Query: 98 GAFSRCVPC----NCNGHADICDAES--GRCICQDNTGGDNCERCARGYYGNALEGAVTD 151
G +C P NC+ D C ++ C GG +C C G+ G EG V +
Sbjct: 953 GYLCQCAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGGFHCA-CPPGFVGLRCEGDVDE 1011
Query: 152 CKQCPCPNQGP--CVQLDDDQVVCSECPRGYGGE 183
C PC G C L + C +C G+ G+
Sbjct: 1012 CLDQPCHPTGTAACHSLAN-AFYC-QCLPGHTGQ 1043
Score = 79 (32.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
CQD G +C +C G+ G + V +C PCP C+ L
Sbjct: 568 CQDQPGAFHC-KCLPGFEGPRCQTEVDECLSDPCPVGASCLDL 609
Score = 76 (31.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D G C C G+ G E + +C+ PC N G C
Sbjct: 530 CHDLLNGFQCI-CLPGFSGTRCEEDIDECRSSPCANGGQC 568
Score = 72 (30.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C G NC C GY G +T C PC N G C
Sbjct: 708 CYPQPSGYNCT-CPTGYTGPTCSEEMTACHSGPCLNGGSC 746
Score = 54 (24.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 5 CICQDNTGG-----DNCE----RCAR-------GYYGNALEGAVTDCKQCPCPNQGPC 46
C+C D + G DNC C R G+ G E + C PC + G C
Sbjct: 651 CLCPDGSPGCAPPEDNCTCHHGHCQRSSCVCDVGWTGPECEAELGGCISAPCAHGGTC 708
Score = 43 (20.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 5 CICQDNTGGDNCE 17
C+C GG +CE
Sbjct: 343 CVCVSGWGGTSCE 355
Score = 37 (18.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 5 CICQDNTGGDNCER 18
C+CQ G C +
Sbjct: 420 CLCQPGYSGPTCHQ 433
>UNIPROTKB|O00468 [details] [associations]
symbol:AGRN "Agrin" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0043236 "laminin binding" evidence=TAS]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=TAS] [GO:0045162 "clustering of voltage-gated
sodium channels" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043113 "receptor clustering" evidence=IDA;IMP]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0050808 "synapse organization"
evidence=TAS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=IDA;TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045887 "positive regulation of synaptic growth
at neuromuscular junction" evidence=ISS] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=ISS] [GO:0051491
"positive regulation of filopodium assembly" evidence=ISS]
[GO:0035374 "chondroitin sulfate binding" evidence=ISS] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISS] [GO:0005509
"calcium ion binding" evidence=ISS] [GO:0033691 "sialic acid
binding" evidence=ISS] [GO:0002162 "dystroglycan binding"
evidence=ISS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0006024 "glycosaminoglycan biosynthetic
process" evidence=TAS] [GO:0006027 "glycosaminoglycan catabolic
process" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000742 InterPro:IPR002350 InterPro:IPR004850
Pfam:PF00008 Pfam:PF00050 Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026
PROSITE:PS51121 PROSITE:PS51465 SMART:SM00181 SMART:SM00280
GO:GO:0005886 Reactome:REACT_111045 Reactome:REACT_116125
GO:GO:0007411 GO:GO:0005615 GO:GO:0009986 GO:GO:0043525
GO:GO:0005200 GO:GO:0005975 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0050808 GO:GO:0045202
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605 GO:GO:0043236
GO:GO:0043113 Orphanet:98913 GO:GO:0007213 PROSITE:PS01186
GO:GO:0033691 GO:GO:0043202 GO:GO:0002162 CTD:375790
eggNOG:NOG312635 HOGENOM:HOG000033860 HOVERGEN:HBG080471 KO:K06254
OrthoDB:EOG4HQDHD GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 EMBL:U84406 EMBL:AB191264
EMBL:AL645608 EMBL:AF016903 EMBL:BC004220 EMBL:BC007649
EMBL:BC034009 EMBL:BC063620 IPI:IPI00374563 RefSeq:NP_940978.2
UniGene:Hs.273330 ProteinModelPortal:O00468 SMR:O00468
IntAct:O00468 MINT:MINT-4053526 STRING:O00468 PhosphoSite:O00468
PaxDb:O00468 PRIDE:O00468 Ensembl:ENST00000379370 GeneID:375790
KEGG:hsa:375790 UCSC:uc001ack.2 GeneCards:GC01P000946 HGNC:HGNC:329
HPA:HPA040090 MIM:103320 MIM:254300 neXtProt:NX_O00468
PharmGKB:PA24626 InParanoid:O00468 OMA:TNRWLRV GenomeRNAi:375790
NextBio:100617 ArrayExpress:O00468 Bgee:O00468 CleanEx:HS_AGRN
Genevestigator:O00468 GermOnline:ENSG00000188157 GO:GO:0005796
GO:GO:0030204 GO:GO:0045162 GO:GO:0006024 GO:GO:0006027
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 Uniprot:O00468
Length = 2067
Score = 138 (53.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 33/88 (37%), Positives = 43/88 (48%)
Query: 106 CNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCP 158
C CN H CD +G+C C+ GG C+RC G++ G VTD C C C
Sbjct: 793 CQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRCEPGFWN--FRGIVTDGRSGCTPCSCD 850
Query: 159 NQGPCVQLDDDQV--VCSECPRGYGGEK 184
QG V+ D +Q+ +CS C G G K
Sbjct: 851 PQG-AVRDDCEQMTGLCS-CKPGVAGPK 876
Score = 50 (22.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 16 CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C+RC + +G AL A T +C CP++ CV L
Sbjct: 534 CDRCGQCRFG-ALCEAETG--RCVCPSE--CVAL 562
Score = 46 (21.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 17/52 (32%), Positives = 22/52 (42%)
Query: 4 RCICQDNTGGDNCER--CARG--YYGNALEGAVTDCKQ---CPCPNQGPCVQ 48
RC C D D R CA+ Y + +C+Q P +QGPC Q
Sbjct: 413 RCSC-DRVTCDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQ 463
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 35 CKQCPCPNQ-GPCVQLDDDQVSN 56
CK+ PCP+ P D SN
Sbjct: 197 CKKSPCPSVVAPVCGSDASTYSN 219
>UNIPROTKB|G3I6Z6 [details] [associations]
symbol:I79_019276 "Neurogenic locus notch-like protein 1"
species:10029 "Cricetulus griseus" [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022362
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275 GO:GO:0030154
GO:GO:0000139 GO:GO:0006355 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219
GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0005796 GO:GO:0050793
Pfam:PF12661 SUPFAM:SSF90193 InterPro:IPR024600 Pfam:PF11936
EMBL:JH001398 Uniprot:G3I6Z6
Length = 2412
Score = 154 (59.3 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 50/185 (27%), Positives = 72/185 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 726 CKDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGTCI----DDVA--GYKCNCPLP 778
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + +G E +FS CV C C+ + C+
Sbjct: 779 YT-GATCEVVLAPCATSPCKNSGVCKESEDYESFS-CV-CPTGWQGQTCEIDINECVKSP 835
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ G C C GY G E + DC+ PC N G C D + +C
Sbjct: 836 CRHGASCQNTNGSYRC-LCQAGYTGRNCESDIDDCRPNPCHNGGSCT--DGINMAFCDCL 892
Query: 178 RGYGG 182
G+ G
Sbjct: 893 PGFQG 897
Score = 122 (48.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +C +C GY+G+ + +C PC N G C+
Sbjct: 1100 CEDEVDECSPNPCQNG-ATCTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCI 1157
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1158 DLTNTYK-CS-CPRGTQG 1173
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 45/184 (24%), Positives = 64/184 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-----SNLGNRT 61
C+D C C GY G+ E + +C PC + G C D+ + G
Sbjct: 538 CKDGVATFTC-LCQPGYTGHHCETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNC 596
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC---DAE 118
I + G L + Y+ EP G+ CN + D C
Sbjct: 597 EINLDDCASNPCDSGTCLDKIDGYECAC---EPGYTGSM-------CNVNIDECAGSPCH 646
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
+G C+D G C RC GY+ V +C PC + G C D +C
Sbjct: 647 NGGT-CEDGIAGFTC-RCPEGYHDPTCLSEVNECNSNPCIH-GAC--RDGLNGYKCDCAP 701
Query: 179 GYGG 182
G+ G
Sbjct: 702 GWSG 705
Score = 103 (41.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S C+ C D+ G C C Y G E + C PC N G
Sbjct: 745 NCQTNINEC--ASNPCLNQGTCIDDVAGYKCN-CPLPYTGATCEVVLAPCATSPCKNSGV 801
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C + +D + CP G+ G+
Sbjct: 802 CKESEDYESFSCVCPTGWQGQ 822
Score = 101 (40.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
D+ + +S C+ CQD+ G C C +GY G + V C PC N G C Q +
Sbjct: 979 DVNECDSRPCLHGGTCQDSYGTYKCT-CPQGYTGLNCQNLVHWCDSAPCKNGGKCWQTNT 1037
Query: 169 DQVVCSECPRGYGG 182
Q C EC G+ G
Sbjct: 1038 -QYHC-ECRSGWTG 1049
Score = 81 (33.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CQD+ G C C +GY G + V C PC N G C Q
Sbjct: 994 CQDSYGTYKCT-CPQGYTGLNCQNLVHWCDSAPCKNGGKCWQ 1034
Score = 62 (26.9 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 15/37 (40%), Positives = 16/37 (43%)
Query: 13 GDNCERCA--RGYYGNALEGAVTDCKQCPCPNQGPCV 47
GD CA G+ G E V DC C N G CV
Sbjct: 195 GDTTHECACLPGFAGQNCEENVDDCPGNNCKNGGACV 231
Score = 61 (26.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG NC C G+ G + DC C C
Sbjct: 270 CHNTHGGYNCV-CVNGWTGEDCSENIDDCASAACFQGATC 308
Score = 58 (25.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D C C G+ G+ + V +C PC + G C
Sbjct: 956 CVDGINSFTC-LCPPGFTGSYCQYDVNECDSRPCLHGGTC 994
Score = 54 (24.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 12/40 (30%), Positives = 14/40 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G C C + G E C PC N G C
Sbjct: 153 CHNEIGSYRCV-CRATHTGPHCELPYVPCSPSPCQNGGTC 191
Score = 39 (18.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 5 CICQDNTGGDNCE----RCARG--YYGNALEGAVT 33
C+C + G +CE C +YG +G T
Sbjct: 510 CVCTEGYTGTHCEVDIDECDPDPCHYGFCKDGVAT 544
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 19 CARGYYGN-ALEGAVTDCKQCPCPNQGPC 46
C G+ G L C PC N G C
Sbjct: 47 CPLGFSGPLCLTPLDNACLANPCRNGGTC 75
Score = 35 (17.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 5/13 (38%), Positives = 6/13 (46%)
Query: 5 CICQDNTGGDNCE 17
C+C G CE
Sbjct: 813 CVCPTGWQGQTCE 825
>ZFIN|ZDB-GENE-990415-47 [details] [associations]
symbol:dld "deltaD" species:7955 "Danio rerio"
[GO:0007154 "cell communication" evidence=IEA] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA;IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IGI;IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0021523 "somatic motor neuron differentiation" evidence=IMP]
[GO:0030165 "PDZ domain binding" evidence=IMP;IDA;IPI] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IGI;IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IGI] [GO:0007368 "determination of
left/right symmetry" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046331 "lateral inhibition" evidence=IMP] [GO:0048546
"digestive tract morphogenesis" evidence=IMP] [GO:0042384 "cilium
assembly" evidence=IMP] [GO:0003140 "determination of left/right
asymmetry in lateral mesoderm" evidence=IGI] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07657
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-990415-47 GO:GO:0016021 GO:GO:0005886 GO:GO:0048471
GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001756 PROSITE:PS01186 GO:GO:0030165 GO:GO:0046331
PROSITE:PS00010 GO:GO:0042384 GO:GO:0048546 GO:GO:0003140
Pfam:PF12661 GO:GO:0021523 eggNOG:NOG249767 HOGENOM:HOG000267024
HOVERGEN:HBG007139 OrthoDB:EOG469QT9 EMBL:Y11760 EMBL:AF426384
IPI:IPI00971691 UniGene:Dr.75102 ProteinModelPortal:Q8UWJ4
SMR:Q8UWJ4 STRING:Q8UWJ4 InParanoid:Q8UWJ4 ArrayExpress:Q8UWJ4
Uniprot:Q8UWJ4
Length = 717
Score = 148 (57.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 52/183 (28%), Positives = 67/183 (36%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSA 68
NTG G C G+ G++ E V +C PC N G C L+ N
Sbjct: 304 NTGQGSYTCSCRPGFTGDSCEIEVNECSGSPCRNGGSCTDLE--------NTYSCTCPPG 355
Query: 69 LGGNRTRGLALTRQTHYQLTGYH-HEPTSGGAFSRC----VPCNCNGHADICDAE--SGR 121
G A+T G H + GG F +C NC D C + S
Sbjct: 356 FYGRNCELSAMTCADGPCFNGGHCADNPEGGYFCQCPMGYAGFNCEKKIDHCSSNPCSND 415
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ-LDDDQVVCSECPRGY 180
C D C+ C G+ G E + +C PC N G C L D C+ CP GY
Sbjct: 416 AQCLDLVDSYLCQ-CPEGFTGTHCEDNIDECATYPCQNGGTCQDGLSD--YTCT-CPPGY 471
Query: 181 GGE 183
G+
Sbjct: 472 TGK 474
Score = 109 (43.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 31/107 (28%), Positives = 39/107 (36%)
Query: 91 HHEPTSGGAFSR-----CVPCNCN-GHA-DICDAESGRCICQDNTGGDNCE--------R 135
HH+P GA C+C G D C+ E C G +C
Sbjct: 292 HHKPCQNGATCTNTGQGSYTCSCRPGFTGDSCEIEVNECSGSPCRNGGSCTDLENTYSCT 351
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C G+YG E + C PC N G C + C +CP GY G
Sbjct: 352 CPPGFYGRNCELSAMTCADGPCFNGGHCADNPEGGYFC-QCPMGYAG 397
Score = 107 (42.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 107 NCNGHADIC---DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
+C + D C ++G CQD C C GY G AV C PC N C
Sbjct: 437 HCEDNIDECATYPCQNGGT-CQDGLSDYTCT-CPPGYTGKNCTSAVNKCLHNPCHNGATC 494
Query: 164 VQLDDDQVVCSECPRGYGG 182
++D+ + VC+ C GYGG
Sbjct: 495 HEMDN-RYVCA-CIPGYGG 511
Score = 100 (40.3 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 106 CNCN-GHADI-CDAESGRCI----CQD-----NTG-GDNCERCARGYYGNALEGAVTDCK 153
CNC G + C+ + C CQ+ NTG G C G+ G++ E V +C
Sbjct: 272 CNCQEGWGGLFCNQDLNYCTHHKPCQNGATCTNTGQGSYTCSCRPGFTGDSCEIEVNECS 331
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
PC N G C L++ C+ CP G+ G
Sbjct: 332 GSPCRNGGSCTDLENTYS-CT-CPPGFYG 358
Score = 53 (23.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C+ C R Y L G QC C
Sbjct: 241 CKCRVGFSGKYCDDCIR--YPGCLHGTCQQPWQCNC 274
>MGI|MGI:97364 [details] [associations]
symbol:Notch2 "notch 2" species:10090 "Mus musculus"
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001709 "cell fate determination" evidence=ISO;TAS] [GO:0001890
"placenta development" evidence=IMP] [GO:0001947 "heart looping"
evidence=IGI] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IMP] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IGI] [GO:0003184 "pulmonary valve morphogenesis"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISO;IC]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IGI]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0007219 "Notch
signaling pathway" evidence=IC;TAS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0009887 "organ
morphogenesis" evidence=TAS] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016049 "cell growth"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IGI] [GO:0042060 "wound
healing" evidence=IDA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IGI] [GO:0045672 "positive regulation
of osteoclast differentiation" evidence=IDA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=ISO] [GO:0050793 "regulation
of developmental process" evidence=IEA] [GO:0051059 "NF-kappaB
binding" evidence=IPI] [GO:0060413 "atrial septum morphogenesis"
evidence=ISO] [GO:0060674 "placenta blood vessel development"
evidence=IMP] [GO:0070986 "left/right axis specification"
evidence=IGI] [GO:0072602 "interleukin-4 secretion" evidence=IGI]
Reactome:REACT_81380 InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
MGI:MGI:97364 GO:GO:0005829 GO:GO:0005634 GO:GO:0005576
GO:GO:0008285 GO:GO:0009986 GO:GO:0005887 GO:GO:0006355
GO:GO:0002437 eggNOG:COG0666 GO:GO:0016049 GO:GO:0001701
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0007050
GO:GO:0006351 Reactome:REACT_115202 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 GO:GO:0030326 PROSITE:PS01186
GO:GO:0042060 PROSITE:PS00010 GO:GO:0001947 GO:GO:0070986
GO:GO:0006959 GO:GO:0072014 GO:GO:0001709 GO:GO:0046579
GO:GO:0072104 GO:GO:0072015 GO:GO:0045672 GO:GO:0060413
GO:GO:0060674 GO:GO:0002011 GO:GO:0072602 SUPFAM:SSF90193
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
ChiTaRS:NOTCH2 InterPro:IPR022336 PRINTS:PR01985 EMBL:D32210
EMBL:X68279 EMBL:U31881 IPI:IPI00467908 IPI:IPI00621767 PIR:A49175
RefSeq:NP_035058.2 UniGene:Mm.485843 ProteinModelPortal:O35516
SMR:O35516 DIP:DIP-6008N IntAct:O35516 STRING:O35516
PhosphoSite:O35516 PaxDb:O35516 PRIDE:O35516 GeneID:18129
KEGG:mmu:18129 UCSC:uc008qpo.1 InParanoid:O35516 NextBio:293360
CleanEx:MM_NOTCH2 Genevestigator:O35516
GermOnline:ENSMUSG00000027878 Uniprot:O35516
Length = 2470
Score = 154 (59.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 55/194 (28%), Positives = 76/194 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C D GG CE C GY G E V +C+ PC N G C+ L + + G R +
Sbjct: 1162 CNDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLC 1220
Query: 64 --RIKSALGGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGHADI 114
I GG G + R Y L G+ E G + C+ PC+ G D
Sbjct: 1221 EENIDECAGGPHCLNGGQCVDRIGGYTCRCLPGFAGERCEGD-INECLSNPCSSEGSLDC 1279
Query: 115 CDAESG-RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQV 171
++ CIC+ G +CE + C Q PC N G C + D
Sbjct: 1280 VQLKNNYNCICRSAFTGRHCETF------------LDVCPQKPCLNGGTCAVASNMPDGF 1327
Query: 172 VCSECPRGYGGEKM 185
+C CP G+ G ++
Sbjct: 1328 IC-RCPPGFSGARL 1340
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 50/185 (27%), Positives = 69/185 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G C C +G+ G + + +C PC NQG C D VS G +
Sbjct: 770 CNNLVNGYRCT-CKKGFKGYNCQVNIDECASNPCLNQGTCF----DDVS--GYTCHCMLP 822
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPC----NCNGHADICDAES-- 119
G N LA + E + +FS C P C D C ++
Sbjct: 823 YT-GKNCQTVLAPCSPNPCENAAVCKEAPNFESFSCLCAPGWQGKRCTVDVDECISKPCM 881
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
+C + G CE C G+ G E + DC PC N G CV D +C G
Sbjct: 882 NNGVCHNTQGSYVCE-CPPGFSGMDCEEDINDCLANPCQNGGSCV--DHVNTFSCQCHPG 938
Query: 180 YGGEK 184
+ G+K
Sbjct: 939 FIGDK 943
Score = 113 (44.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/95 (34%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 438 FHCECLKGYAGPRCEMDINEC--HSDPCQNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 491
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
V +C+ PC N G CV ++ C CP G+ G
Sbjct: 492 EVNECQSNPCVNNGQCVD-KVNRFQCL-CPPGFTG 524
Score = 111 (44.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 28/77 (36%), Positives = 34/77 (44%)
Query: 108 CNGHADICDAESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C D C + + C D GG CE C GY G E V +C+ PC N G C+
Sbjct: 1144 CEEQLDECASNPCQHGATCNDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCID 1202
Query: 166 LDDDQVVCSECPRGYGG 182
L + CS CP G G
Sbjct: 1203 LVN-HFKCS-CPPGTRG 1217
Score = 101 (40.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 26/74 (35%), Positives = 34/74 (45%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI + S C+ C D G C C GY G + V C + PC N+G CVQ +
Sbjct: 1023 DINECSSNPCLNAGTCVDGLGTYRCI-CPLGYTGKNCQTLVNLCSRSPCKNKGTCVQ-EK 1080
Query: 169 DQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1081 ARPHCL-CPPGWDG 1093
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 108 CNGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C+ + D CD + CQD C C GY G + +C PC N G C+ L
Sbjct: 565 CDENIDNCDPDPCHHGQCQDGIDSYTCI-CNPGYMGAICSDQIDECYSSPCLNDGRCIDL 623
Query: 167 DDDQVVCSECPRGYGG 182
+ C+ C G G
Sbjct: 624 VNGYQ-CN-CQPGTSG 637
Score = 85 (35.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G + + +C PC + G C Q
Sbjct: 530 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGILCDENIDNCDPDPC-HHGQC-QDGI 586
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 587 DSYTCI-CNPGYMG 599
Score = 85 (35.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 23/87 (26%), Positives = 34/87 (39%)
Query: 106 CNCN-GH-ADICDAESGRCICQDNTGGDNCE--------RCARGYYGNALEGAVTDCKQC 155
C C+ G D C + C+ + G C C G++G E + +C +
Sbjct: 933 CQCHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTES 992
Query: 156 PCPNQGPCVQLDDDQVVCSECPRGYGG 182
C N G CV + C CP G+ G
Sbjct: 993 SCFNGGTCVD-GINSFSCL-CPVGFTG 1017
Score = 83 (34.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E V +C+ PC N G CV
Sbjct: 469 CLDKIGGFTC-LCMPGFKGVHCELEVNECQSNPCVNNGQCV 508
Score = 83 (34.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G C C GY G + V C + PC N+G CVQ
Sbjct: 1038 CVDGLGTYRCI-CPLGYTGKNCQTLVNLCSRSPCKNKGTCVQ 1078
Score = 82 (33.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 113 DICDAESGRC----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D + C C D+ +C+ C G+ G+ + + +C PC N G C +
Sbjct: 909 DINDCLANPCQNGGSCVDHVNTFSCQ-CHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVN 967
Query: 169 DQVVCSECPRGYGG 182
C+ CP G+ G
Sbjct: 968 SYT-CT-CPAGFHG 979
Score = 69 (29.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G++G E + +C + C N G CV
Sbjct: 962 CSDYVNSYTCT-CPAGFHGVHCENNIDECTESSCFNGGTCV 1001
Score = 67 (28.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D+ +C+ C G+ G+ + + +C PC N G C
Sbjct: 924 CVDHVNTFSCQ-CHPGFIGDKCQTDMNECLSEPCKNGGTC 962
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 7 CQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ TG E C G+ G+ E + DC C N G CV
Sbjct: 234 CRQ-TGDFTLECNCLPGFEGSTCERNIDDCPNHKCQNGGVCV 274
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G+ G + + DC PC N C+
Sbjct: 507 CVDKVNRFQC-LCPPGFTGPVCQIDIDDCSSTPCLNGAKCI 546
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-C-KQCPCPNQGPCVQLDDD 52
C+ Q G C RCA G+ G + + + C PC N G C L D
Sbjct: 79 CVPQGMLGKATC-RCAPGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSRD 127
Score = 60 (26.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C + GG C C G+ G+ + DC C C+
Sbjct: 313 CTNRNGGYGCV-CVNGWSGDDCSENIDDCAYASCTPGSTCI 352
Score = 55 (24.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C +G+ G + + PC N G C Q D
Sbjct: 198 CLNLPGSYRCQ-CGQGFTGQHCDSPYV--RGLPCVNGGTCRQTGD 239
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ N G C RC G+ G + C++ C N G CV
Sbjct: 41 CVTYHN-GTGFC-RCPEGFLGEYCQHR-DPCEKNRCQNGGTCV 80
Score = 51 (23.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/59 (30%), Positives = 22/59 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNAL--EGAVTDCK---QCPCPN--QGPCVQLDDDQVSN 56
C+C G +CE N G D QC CP GP Q+D D S+
Sbjct: 478 CLCMPGFKGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSS 536
>MGI|MGI:97363 [details] [associations]
symbol:Notch1 "notch 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IDA] [GO:0001669
"acrosomal vesicle" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0001947 "heart looping" evidence=IGI] [GO:0002040 "sprouting
angiogenesis" evidence=IMP] [GO:0002051 "osteoblast fate
commitment" evidence=NAS] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=ISO] [GO:0002193
"MAML1-RBP-Jkappa- ICN1 complex" evidence=ISO] [GO:0002437
"inflammatory response to antigenic stimulus" evidence=IGI]
[GO:0003157 "endocardium development" evidence=IMP] [GO:0003160
"endocardium morphogenesis" evidence=IMP] [GO:0003162
"atrioventricular node development" evidence=IMP] [GO:0003169
"coronary vein morphogenesis" evidence=IMP] [GO:0003180 "aortic
valve morphogenesis" evidence=ISO] [GO:0003181 "atrioventricular
valve morphogenesis" evidence=IMP] [GO:0003184 "pulmonary valve
morphogenesis" evidence=ISO] [GO:0003192 "mitral valve formation"
evidence=ISO] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IMP]
[GO:0003203 "endocardial cushion morphogenesis" evidence=IMP]
[GO:0003207 "cardiac chamber formation" evidence=IMP] [GO:0003208
"cardiac ventricle morphogenesis" evidence=IMP] [GO:0003209
"cardiac atrium morphogenesis" evidence=IMP] [GO:0003213 "cardiac
right atrium morphogenesis" evidence=IMP] [GO:0003214 "cardiac left
ventricle morphogenesis" evidence=IMP] [GO:0003219 "cardiac right
ventricle formation" evidence=IMP] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IMP] [GO:0003241
"growth involved in heart morphogenesis" evidence=IMP] [GO:0003256
"regulation of transcription from RNA polymerase II promoter
involved in myocardial precursor cell differentiation"
evidence=IMP] [GO:0003264 "regulation of cardioblast proliferation"
evidence=ISO] [GO:0003270 "Notch signaling pathway involved in
regulation of secondary heart field cardioblast proliferation"
evidence=IMP] [GO:0003273 "cell migration involved in endocardial
cushion formation" evidence=IMP] [GO:0003344 "pericardium
morphogenesis" evidence=IMP] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0004857 "enzyme
inhibitor activity" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IMP;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006959 "humoral immune response" evidence=IGI] [GO:0007219
"Notch signaling pathway" evidence=ISO;IC;IDA;IMP] [GO:0007221
"positive regulation of transcription of Notch receptor target"
evidence=ISO;IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0007386 "compartment pattern specification"
evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007507 "heart
development" evidence=ISO;IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISO;IGI] [GO:0008544 "epidermis
development" evidence=IGI] [GO:0009790 "embryo development"
evidence=ISO] [GO:0009912 "auditory receptor cell fate commitment"
evidence=IMP] [GO:0009986 "cell surface" evidence=IDA] [GO:0010001
"glial cell differentiation" evidence=IMP] [GO:0010468 "regulation
of gene expression" evidence=IMP] [GO:0010718 "positive regulation
of epithelial to mesenchymal transition" evidence=ISO;IMP]
[GO:0010812 "negative regulation of cell-substrate adhesion"
evidence=ISO] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IDA] [GO:0014031 "mesenchymal cell
development" evidence=IMP] [GO:0014807 "regulation of
somitogenesis" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0021915 "neural tube
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0030216 "keratinocyte differentiation" evidence=IMP]
[GO:0030279 "negative regulation of ossification" evidence=IMP]
[GO:0030324 "lung development" evidence=IMP] [GO:0030326 "embryonic
limb morphogenesis" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP] [GO:0030335 "positive regulation of cell
migration" evidence=IMP] [GO:0030513 "positive regulation of BMP
signaling pathway" evidence=IDA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IGI;IMP] [GO:0031069 "hair follicle
morphogenesis" evidence=IMP] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0032495 "response to muramyl dipeptide"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=ISO] [GO:0042640 "anagen" evidence=IMP] [GO:0043065
"positive regulation of apoptotic process" evidence=IGI;IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IMP]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=ISO] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=IGI;IDA] [GO:0045662
"negative regulation of myoblast differentiation" evidence=ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=ISO;IGI;IMP] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0045687 "positive
regulation of glial cell differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0045955 "negative regulation of
calcium ion-dependent exocytosis" evidence=IMP] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IDA] [GO:0046533
"negative regulation of photoreceptor cell differentiation"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IGI;IDA]
[GO:0048663 "neuron fate commitment" evidence=IGI] [GO:0048708
"astrocyte differentiation" evidence=ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IDA] [GO:0048715
"negative regulation of oligodendrocyte differentiation"
evidence=IDA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0050678 "regulation of epithelial cell
proliferation" evidence=IMP] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IGI] [GO:0050767
"regulation of neurogenesis" evidence=IMP] [GO:0050768 "negative
regulation of neurogenesis" evidence=IDA] [GO:0050793 "regulation
of developmental process" evidence=IEA] [GO:0055008 "cardiac muscle
tissue morphogenesis" evidence=IMP] [GO:0060038 "cardiac muscle
cell proliferation" evidence=IMP] [GO:0060045 "positive regulation
of cardiac muscle cell proliferation" evidence=IMP] [GO:0060253
"negative regulation of glial cell proliferation" evidence=IDA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0060411 "cardiac septum morphogenesis"
evidence=IMP] [GO:0060412 "ventricular septum morphogenesis"
evidence=ISO] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IMP] [GO:0060548 "negative regulation of cell
death" evidence=IMP] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IMP] [GO:0060768 "regulation of epithelial
cell proliferation involved in prostate gland development"
evidence=IMP] [GO:0060842 "arterial endothelial cell
differentiation" evidence=IMP] [GO:0060843 "venous endothelial cell
differentiation" evidence=IMP] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=IMP] [GO:0060956 "endocardial
cell differentiation" evidence=IMP] [GO:0060979 "vasculogenesis
involved in coronary vascular morphogenesis" evidence=IMP]
[GO:0060982 "coronary artery morphogenesis" evidence=IMP]
[GO:0061314 "Notch signaling involved in heart development"
evidence=IGI;ISO;IMP] [GO:0061344 "regulation of cell adhesion
involved in heart morphogenesis" evidence=IC] [GO:0061384 "heart
trabecula morphogenesis" evidence=IMP] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IDA] [GO:0070986 "left/right axis
specification" evidence=IGI] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=ISO] [GO:0072602
"interleukin-4 secretion" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:1901189 "positive regulation of ephrin receptor
signaling pathway" evidence=IC] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IMP] [GO:2000737 "negative
regulation of stem cell differentiation" evidence=ISO] [GO:2000811
"negative regulation of anoikis" evidence=ISO] [GO:2000974
"negative regulation of pro-B cell differentiation" evidence=IMP]
Reactome:REACT_99130 Reactome:REACT_81380 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
MGI:MGI:97363 GO:GO:0005829 GO:GO:0001708 GO:GO:0043066
GO:GO:0005576 GO:GO:0030216 GO:GO:0005654 GO:GO:0009986
GO:GO:0000139 GO:GO:0005887 GO:GO:0002437 GO:GO:0005789
GO:GO:0030324 eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857
GO:GO:0043565 GO:GO:0001669 GO:GO:0032496 GO:GO:0001701
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0030900 GO:GO:0005509 GO:GO:0004872
GO:GO:0001889 GO:GO:0003700 GO:GO:0007283 Reactome:REACT_115202
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0043065
GO:GO:0072144 GO:GO:0007409 GO:GO:0030513 GO:GO:0045603
GO:GO:0010718 PROSITE:PS01186 GO:GO:0042246 GO:GO:0045955
GO:GO:0030335 GO:GO:0001047 GO:GO:0001190 GO:GO:0030279
GO:GO:0090090 EMBL:CH466542 GO:GO:0035116 GO:GO:0046427
PROSITE:PS00010 GO:GO:0001947 GO:GO:0070986 GO:GO:0006959
GO:GO:0042640 GO:GO:0021915 GO:GO:0060740 GO:GO:0002040
GO:GO:0003160 GO:GO:0007492 GO:GO:0060979 GO:GO:0010812
GO:GO:0035914 GO:GO:0072044 GO:GO:0072017 GO:GO:0031490
GO:GO:0048709 GO:GO:0045668 GO:GO:0002052 GO:GO:0031069
GO:GO:2000811 GO:GO:0048754 GO:GO:0050679 GO:GO:0010001
GO:GO:0010832 GO:GO:0048103 GO:GO:0060038 GO:GO:0060045
GO:GO:0003181 GO:GO:0048711 GO:GO:0045662 GO:GO:0048715
GO:GO:0030514 GO:GO:0032495 GO:GO:0003214 Pfam:PF12661
MEROPS:I63.002 GO:GO:0060411 GO:GO:0046533 GO:GO:0031960
GO:GO:0045618 GeneTree:ENSGT00700000104305 GO:GO:0060982
GO:GO:0021515 GO:GO:0007440 GO:GO:0007386 GO:GO:0097150
GO:GO:0009912 GO:GO:0003344 GO:GO:0003222 EMBL:AL732541
GO:GO:0003180 GO:GO:0003273 GO:GO:0060253 GO:GO:0003198
GO:GO:0060528 GO:GO:0072602 SUPFAM:SSF90193 GO:GO:0003219
GO:GO:0048708 GO:GO:2000974 GO:GO:2000737 GO:GO:0060842
GO:GO:0060948 GO:GO:0061419 PDB:3P3N PDB:3P3P PDBsum:3P3N
PDBsum:3P3P GO:GO:0002193 GO:GO:0002051 GO:GO:0003241
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4851 OMA:HGGYNCV
OrthoDB:EOG4HX504 GO:GO:0003213 GO:GO:0003169 GO:GO:0060956
GO:GO:0007221 GO:GO:1901201 GO:GO:0003256 GO:GO:0060843 EMBL:Z11886
EMBL:AF508809 EMBL:AB100603 EMBL:BC138441 EMBL:BC138442 EMBL:L02613
EMBL:X68278 EMBL:AK154528 EMBL:AK157475 EMBL:AJ238029 EMBL:X82562
IPI:IPI00127186 IPI:IPI00322561 IPI:IPI00974755 IPI:IPI00986769
PIR:A46438 PIR:B49175 RefSeq:NP_032740.3 UniGene:Mm.290610 PDB:1YMP
PDB:2QC9 PDB:2RQZ PDB:2RR0 PDB:2RR2 PDBsum:1YMP PDBsum:2QC9
PDBsum:2RQZ PDBsum:2RR0 PDBsum:2RR2 ProteinModelPortal:Q01705
SMR:Q01705 DIP:DIP-214N IntAct:Q01705 MINT:MINT-142586
STRING:Q01705 PhosphoSite:Q01705 PaxDb:Q01705 PRIDE:Q01705
Ensembl:ENSMUST00000028288 GeneID:18128 KEGG:mmu:18128
InParanoid:Q01705 EvolutionaryTrace:Q01705 NextBio:293356
Bgee:Q01705 CleanEx:MM_NOTCH1 Genevestigator:Q01705
GermOnline:ENSMUSG00000026923 GO:GO:0003162 GO:GO:0003270
GO:GO:1901189 GO:GO:0061344 GO:GO:0060768 GO:GO:0014807
Uniprot:Q01705
Length = 2531
Score = 154 (59.3 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 50/185 (27%), Positives = 71/185 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 768 CKDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGTCI----DDVA--GYKCNCPLP 820
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + +G E +FS CV C C+ + C+
Sbjct: 821 YT-GATCEVVLAPCATSPCKNSGVCKESEDYESFS-CV-CPTGWQGQTCEVDINECVKSP 877
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ G C C GY G E + DC+ PC N G C D +C
Sbjct: 878 CRHGASCQNTNGSYRC-LCQAGYTGRNCESDIDDCRPNPCHNGGSCT--DGINTAFCDCL 934
Query: 178 RGYGG 182
G+ G
Sbjct: 935 PGFQG 939
Score = 123 (48.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +C +C GY+G+ + +C PC N G C+
Sbjct: 1142 CEDEVDECSPNPCQNG-ATCTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCI 1199
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1200 DLTNSYK-CS-CPRGTQG 1215
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 45/184 (24%), Positives = 64/184 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-----SNLGNRT 61
C+D C C GY G+ E + +C PC + G C D+ + G
Sbjct: 580 CKDGVATFTC-LCQPGYTGHHCETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNC 638
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC---DAE 118
I + G L + Y+ EP G+ CN + D C
Sbjct: 639 EINLDDCASNPCDSGTCLDKIDGYECAC---EPGYTGSM-------CNVNIDECAGSPCH 688
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
+G C+D G C RC GY+ V +C PC + G C D +C
Sbjct: 689 NGGT-CEDGIAGFTC-RCPEGYHDPTCLSEVNECNSNPCIH-GAC--RDGLNGYKCDCAP 743
Query: 179 GYGG 182
G+ G
Sbjct: 744 GWSG 747
Score = 103 (41.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S C+ C D+ G C C Y G E + C PC N G
Sbjct: 787 NCQTNINEC--ASNPCLNQGTCIDDVAGYKCN-CPLPYTGATCEVVLAPCATSPCKNSGV 843
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C + +D + CP G+ G+
Sbjct: 844 CKESEDYESFSCVCPTGWQGQ 864
Score = 62 (26.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 15/37 (40%), Positives = 16/37 (43%)
Query: 13 GDNCERCA--RGYYGNALEGAVTDCKQCPCPNQGPCV 47
GD CA G+ G E V DC C N G CV
Sbjct: 237 GDTTHECACLPGFAGQNCEENVDDCPGNNCKNGGACV 273
Score = 61 (26.5 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG NC C G+ G + DC C C
Sbjct: 312 CHNTHGGYNCV-CVNGWTGEDCSENIDDCASAACFQGATC 350
Score = 56 (24.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 50
C+ G + C C+ + G + + C PC N G C +D
Sbjct: 37 CEVANGTEACV-CSGAFVGQRCQDS-NPCLSTPCKNAGTCHVVD 78
Score = 55 (24.4 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 12/40 (30%), Positives = 14/40 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G C C + G E C PC N G C
Sbjct: 195 CHNEIGSYRCA-CRATHTGPHCELPYVPCSPSPCQNGGTC 233
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/44 (31%), Positives = 16/44 (36%)
Query: 5 CICQDNTGG-DNCERCARGYYGN-ALEGAVTDCKQCPCPNQGPC 46
C D+ G D C G+ G L C PC N G C
Sbjct: 74 CHVVDHGGTVDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTC 117
Score = 35 (17.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 5/13 (38%), Positives = 6/13 (46%)
Query: 5 CICQDNTGGDNCE 17
C+C G CE
Sbjct: 855 CVCPTGWQGQTCE 867
>UNIPROTKB|Q0V7L8 [details] [associations]
symbol:DLL4 "Delta-like protein" species:9913 "Bos taurus"
[GO:0072554 "blood vessel lumenization" evidence=IEA] [GO:0061314
"Notch signaling involved in heart development" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0043537
"negative regulation of blood vessel endothelial cell migration"
evidence=IEA] [GO:0035912 "dorsal aorta morphogenesis"
evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA] [GO:0003344
"pericardium morphogenesis" evidence=IEA] [GO:0003222 "ventricular
trabecula myocardium morphogenesis" evidence=IEA] [GO:0003209
"cardiac atrium morphogenesis" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0001569 "patterning of blood
vessels" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
Pfam:PF00008 Pfam:PF01414 Pfam:PF07657 PROSITE:PS50026
PROSITE:PS51051 SMART:SM00051 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007219 GO:GO:0005509
GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001974
GO:GO:0043537 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
GeneTree:ENSGT00690000101660 eggNOG:NOG249767 HOGENOM:HOG000267024
HOVERGEN:HBG007139 KO:K06051 CTD:54567 OMA:LPFNFTW
OrthoDB:EOG4PZJ63 GO:GO:0072554 GO:GO:0035912 GO:GO:0050767
EMBL:DAAA02028556 EMBL:BC140546 EMBL:BT026552 IPI:IPI00695938
RefSeq:NP_001069247.1 UniGene:Bt.12263 STRING:Q0V7L8
Ensembl:ENSBTAT00000013680 GeneID:518746 KEGG:bta:518746
InParanoid:Q0V7L8 NextBio:20872716 Uniprot:Q0V7L8
Length = 685
Score = 120 (47.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 32/108 (29%), Positives = 41/108 (37%)
Query: 91 HHEPTSGGAF-----SRCVPCNCN-GHADI-CDAESGRC---------ICQDNTGGDNCE 134
HH P GA R C C G+ + C+ E C C+D G +C
Sbjct: 290 HHSPCKNGATCSNSGQRSYTCTCRPGYTGVDCELELSECDSNPCRNGGSCKDQEDGYHC- 348
Query: 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C GYYG E + C PC N G C + + ECP + G
Sbjct: 349 LCPPGYYGLHCEHSTLSCADSPCFNGGSCRERNQGTSYACECPPNFTG 396
Score = 117 (46.2 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 32/105 (30%), Positives = 48/105 (45%)
Query: 89 GYHHEPTSGGAFS-RCVP----CNCNGHADICD----AESGRCICQDNTGGDNCERCARG 139
G E G +++ C P NC D C A G+C+ N G + RC G
Sbjct: 375 GSCRERNQGTSYACECPPNFTGSNCEKKVDRCTSNPCANGGQCL---NRGPNRVCRCRPG 431
Query: 140 YYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+ G E ++DC + PC + G C L++ VC+ CP G+ G +
Sbjct: 432 FTGAHCEINISDCARSPCVHGGTCHDLENG-FVCT-CPAGFSGRR 474
Score = 86 (35.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 28/92 (30%), Positives = 37/92 (40%)
Query: 102 RCVPCNCNGHADICDAESGR--CI----CQDNTGGDNCERCARGYYGNALEGAVTD--CK 153
RC P H +I ++ R C+ C D G C C G+ G E + C
Sbjct: 427 RCRPGFTGAHCEINISDCARSPCVHGGTCHDLENGFVCT-CPAGFSGRRCEVRMPAEACA 485
Query: 154 QCPCPNQGPCVQ-LDDDQVVCSECPRGYGGEK 184
PC N C L D VC+ CP G+ G +
Sbjct: 486 SGPCFNGATCYPGLPPDNFVCN-CPYGFVGSR 516
Score = 82 (33.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C+D G +C C GYYG E + C PC N G C
Sbjct: 339 CKDQEDGYHC-LCPPGYYGLHCEHSTLSCADSPCFNGGSC 377
Score = 62 (26.9 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 19 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C GY G E +++C PC N G C +D
Sbjct: 312 CRPGYTGVDCELELSECDSNPCRNGGSCKDQED 344
Score = 52 (23.4 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 4 RCICQDNTGGDNCERCAR 21
R IC DN GD+C R +
Sbjct: 172 RVICSDNYYGDSCSRLCK 189
>WB|WBGene00013416 [details] [associations]
symbol:Y64G10A.7 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:AL110498
EMBL:AL117206 GeneID:178377 KEGG:cel:CELE_Y64G10A.7 CTD:178377
RefSeq:NP_001255802.1 ProteinModelPortal:G5EFX3 SMR:G5EFX3
EnsemblMetazoa:Y64G10A.7b WormBase:Y64G10A.7b OMA:RIEMEVI
Uniprot:G5EFX3
Length = 1714
Score = 152 (58.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 60/208 (28%), Positives = 78/208 (37%)
Query: 4 RCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNR-- 60
RC C G++CE+ C G+YG E + C C N C + G R
Sbjct: 1248 RCECLPGWSGEHCEKSCVSGHYGAKCE------ETCECENGALCDPISGHCSCQPGWRGK 1301
Query: 61 --TRIRIKSALGGNRTRGLALTRQT---HYQ-----LTGYH-HEPTS---GGAFSR-CVP 105
R +K G + ++ H GY H T G F C
Sbjct: 1302 KCNRPCLKGYFGRHCSQSCRCANSKSCDHISGRCQCPKGYAGHSCTELCPDGTFGESCSQ 1361
Query: 106 -CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGP 162
C+C G +CDA SG+C C+ G +C+ C +G +G DC Q C C N G
Sbjct: 1362 KCDC-GENSMCDAISGKCFCKPGHSGSDCKSGCVQGRFG-------PDCNQLCSCENGGV 1413
Query: 163 CVQLDDDQVVCSECPRGYGGEKMSPGAQ 190
C D C CP GY G K Q
Sbjct: 1414 C---DSSTGSCV-CPPGYIGTKCEIACQ 1437
Score = 143 (55.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 56/196 (28%), Positives = 76/196 (38%)
Query: 5 CICQDNTGGDNCE-RCARGYYG-NALEGAVT----DCKQ----CPCPN--QGP-CVQLDD 51
C C G NCE C G +G N ++ + +C + C C + GP C L
Sbjct: 1163 CDCPSGFMGKNCESECPEGLWGSNCMKHCLCMHGGECNKENGDCECIDGWTGPSCEFLCP 1222
Query: 52 DQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPT--SGGAFSRCVP-CNC 108
R K+ +R G + +G H E + SG ++C C C
Sbjct: 1223 FGQFGRNCAQRCNCKNGASCDRKTGRC---ECLPGWSGEHCEKSCVSGHYGAKCEETCEC 1279
Query: 109 NGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPCVQL 166
A +CD SG C CQ G C R C +GY+G C Q C C N C +
Sbjct: 1280 ENGA-LCDPISGHCSCQPGWRGKKCNRPCLKGYFGR-------HCSQSCRCANSKSCDHI 1331
Query: 167 DDDQVVCSECPRGYGG 182
C +CP+GY G
Sbjct: 1332 SGR---C-QCPKGYAG 1343
Score = 124 (48.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 32/90 (35%), Positives = 42/90 (46%)
Query: 98 GAFSR-CVP-CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ 154
G F R C CNC A CD ++GRC C G++CE+ C G+YG E +
Sbjct: 1224 GQFGRNCAQRCNCKNGAS-CDRKTGRCECLPGWSGEHCEKSCVSGHYGAKCE------ET 1276
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C C N C + CS C G+ G+K
Sbjct: 1277 CECENGALCDPISGH---CS-CQPGWRGKK 1302
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 55/194 (28%), Positives = 74/194 (38%)
Query: 4 RCICQDNTGGDNCER-CARGYYG---NAL----EGAVTDCK--QCPCPNQGPCVQLDDDQ 53
+C C+ G +C+ C +G +G N L G V D C CP + +
Sbjct: 1377 KCFCKPGHSGSDCKSGCVQGRFGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGTKCEIAC 1436
Query: 54 VSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYH-HEPTSGGAFSR-CVP-CNC-N 109
S+ T +I + G L + TG ++ G F C C C N
Sbjct: 1437 QSDRFGPTCEKICNCENGGTCDRLTGQCRCLPGFTGMTCNQVCPEGRFGAGCKEKCRCAN 1496
Query: 110 GHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
GH C+A SG C C G +CE+ C G YG DC+ C Q C D
Sbjct: 1497 GH---CNASSGECKCNLGFTGPSCEQSCPSGKYGL---NCTLDCE---CYGQARC----D 1543
Query: 169 DQVVCSECPRG-YG 181
C +CP G YG
Sbjct: 1544 PVQGCCDCPPGRYG 1557
Score = 106 (42.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPCP-NQGPC 163
C+C A CD GRC+C GD CE +C+ G +G A +C + C G C
Sbjct: 1577 CSCQNGAH-CDGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQC-NCGKYKCDATDGKC 1634
Query: 164 V-QLDDDQVVCSE-C-PRGYG 181
+ + +C E C P YG
Sbjct: 1635 ICPVGRHGPLCEEECRPGRYG 1655
Score = 104 (41.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 32/95 (33%), Positives = 41/95 (43%)
Query: 94 PTSGGAFS-RCVP-CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVT 150
PT G F C+ C C A ICD +G C C G C++ CA G +G
Sbjct: 954 PT--GRFGIDCMQLCKCQNGA-ICDTSNGSCECAPGWSGKKCDKACAPGTFGK------- 1003
Query: 151 DC-KQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
DC K+C C + C D + + CP G G K
Sbjct: 1004 DCSKKCDCADGMHCDPSDGECI----CPPGKKGHK 1034
Score = 101 (40.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/86 (36%), Positives = 39/86 (45%)
Query: 96 SGGAFS-RCVP-CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALE------ 146
S G+F C CNC + CDA G+CIC G CE C G YG + +
Sbjct: 1608 SEGSFGPACSQQCNCGKYK--CDATDGKCICPVGRHGPLCEEECRPGRYGQSCQNKCQCF 1665
Query: 147 -GAVTDCK--QCPC-PNQ-GPCVQLD 167
GA D + QC C P GP Q++
Sbjct: 1666 NGATCDARTGQCSCSPGWLGPTCQIE 1691
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/91 (32%), Positives = 36/91 (39%)
Query: 98 GAFSR-CVP-CNCNGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQ 154
G F + C C+C CD G CIC G C E C G +G +G
Sbjct: 999 GTFGKDCSKKCDCADGMH-CDPSDGECICPPGKKGHKCDETCDSGLFGAGCKGI------ 1051
Query: 155 CPCPNQGPCVQLDDDQVVCS-ECPRGYGGEK 184
C C N C D V S EC G+ G+K
Sbjct: 1052 CSCQNGATC-----DSVTGSCECRPGWRGKK 1077
Score = 95 (38.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDC-KQCPCPNQGPC 163
C C+ A CD +G C C G NCE C G +G+ +C K C C + G C
Sbjct: 1148 CQCSNGAS-CDRVTGFCDCPSGFMGKNCESECPEGLWGS-------NCMKHCLCMHGGEC 1199
Query: 164 VQLDDDQVVCSECPRGYGG 182
+ + D C EC G+ G
Sbjct: 1200 NKENGD---C-ECIDGWTG 1214
Score = 92 (37.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 24/79 (30%), Positives = 33/79 (41%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQ-GPC 163
C+C A CD+ +G C C+ G C+R C G +G A+ DC + P
Sbjct: 1052 CSCQNGAT-CDSVTGSCECRPGWRGKKCDRPCPDGRFGEGCN-AICDCTTTNDTSMYNPF 1109
Query: 164 VQLDDDQVVCSECPRGYGG 182
V D CP G+ G
Sbjct: 1110 VARCDHVTGECRCPAGWTG 1128
Score = 72 (30.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 1 MFRRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSN 56
+ +C C G+ CE+ C GY+G + CK C P+ G C D ++ S+
Sbjct: 670 LLSKCDCPSGYTGEKCEQICRNGYWGVDCAHKCS-CKLCD-PSTGSCRCEDPEKCSD 724
Score = 58 (25.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 5 CICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
CIC G C E C G +G +G C C N C
Sbjct: 1024 CICPPGKKGHKCDETCDSGLFGAGCKGI------CSCQNGATC 1060
Score = 55 (24.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 4 RCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCP----C-PNQGPCVQ 48
+C C+ G +C+R C+ G +G G C CP C P G C +
Sbjct: 800 KCRCKPGYYGHHCKRMCSPGLFG---AGCAMKCS-CPAGIRCDPVTGDCTK 846
Score = 53 (23.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDC 35
C C+ G C+R C G +G A+ DC
Sbjct: 1067 CECRPGWRGKKCDRPCPDGRFGEGCN-AICDC 1097
Score = 50 (22.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 1 MFRRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
+F C C D G +CE+ C +G + CK C N C ++
Sbjct: 752 VFGYCTCPDGLYGQSCEKPCPHFTFG---KNCRFPCK-CARENSEGCDEI 797
Score = 36 (17.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 7 CQDNTGGDNCERCARGY 23
C D G + +C GY
Sbjct: 377 CYDQPDGGHVCKCRNGY 393
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 142 (55.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 51/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 36 CDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLACN---C---------NLHARRCR 83
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY G++ + + + C C+C+ G
Sbjct: 84 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGA 143
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
A C+ +G+C C+D G C RCA+G+ + V C + P N V +
Sbjct: 144 AGKTCNQTTGQCPCKDGVTGLTCNRCAKGFQQS--RSPVAPCIKIPAINPTSLVTSTEAP 201
Query: 171 VVC-SECPRGYGGEKMS 186
C S C G K++
Sbjct: 202 ADCDSYCKPAKGNYKIN 218
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 151 (58.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 53/190 (27%), Positives = 76/190 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C C+ G C RC G+YG L+ DC + C C P +D D ++ N +
Sbjct: 657 QCDCKRRVSGRRCFRCHIGFYG--LQALDPDCCRPCDC---NPSGTVDGD-ITCHHNSGQ 710
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAES 119
K+ GL R + G+ + C PC+CN H + CD S
Sbjct: 711 CSCKA-----NVIGLRCDRCSF----GFKFLRSLNA--DGCEPCHCNLHGSVNQLCDPLS 759
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCP------CPNQ-GPCV-QLDDDQ 170
G+C+C+ G C+ C +YG V DC + C + G CV +
Sbjct: 760 GQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAGTQAGTVCDAETGQCVCKPSVGG 819
Query: 171 VVCSECPRGY 180
CSEC GY
Sbjct: 820 RRCSECKEGY 829
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Query: 97 GGAFSRCVPCNCN--GH--ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC 152
G +S C C+CN G +CDAE+G+C+C+ + GG C C GY+ N + C
Sbjct: 782 GLPWSACEVCDCNRAGTQAGTVCDAETGQCVCKPSVGGRRCSECKEGYF-NLRQNDSHLC 840
Query: 153 KQCPCPNQG 161
C C G
Sbjct: 841 LPCNCEKTG 849
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 46/183 (25%), Positives = 65/183 (35%)
Query: 4 RCICQDN--TGGDNCERCARGYYGNALEGA----VTDCKQCPCPNQGPCVQLDD--DQVS 55
RC+C + T G C RC+ Y +CK C C D D
Sbjct: 531 RCLCSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFP 590
Query: 56 NLGNRTRIRIKSALGGNRT-RGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD- 113
NR + + T R + Y+ G +P C CN +G +
Sbjct: 591 LEYNRGGGGVCDDCQHHTTGRNCESCQDYFYRPIGA--DPADPEVCKHC-DCNRDGTRNG 647
Query: 114 --ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC-KQCPCPNQGPCVQLDDDQ 170
+CD +C C+ G C RC G+YG L+ DC + C C P +D D
Sbjct: 648 SLLCDLVGDQCDCKRRVSGRRCFRCHIGFYG--LQALDPDCCRPCDC---NPSGTVDGD- 701
Query: 171 VVC 173
+ C
Sbjct: 702 ITC 704
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 146 (56.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 50/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 351
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY G++ + + C C+C+ G
Sbjct: 352 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGA 411
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + + C + P P +++
Sbjct: 412 AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPVAPPTTAASSMEEP 469
Query: 170 QVVCSECPRGYGGEKMS 186
+ S C G KM+
Sbjct: 470 EDCDSYCKASKGKLKMN 486
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 146 (56.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 50/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 351
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY G++ + + C C+C+ G
Sbjct: 352 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGA 411
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + + C + P P +++
Sbjct: 412 AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPVAPPTTAASSMEEP 469
Query: 170 QVVCSECPRGYGGEKMS 186
+ S C G KM+
Sbjct: 470 EDCDSYCKASKGKLKMN 486
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 146 (56.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 49/197 (24%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 306 CDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 353
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY G++ + + + + C C+C+ G
Sbjct: 354 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGA 413
Query: 112 A-DICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
A C+ +G+C C+D G C RCA+GY + + C + P ++
Sbjct: 414 AGQTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPAAPPPTAASSTEEP 471
Query: 171 VVC-SECPRGYGGEKMS 186
C S C G K++
Sbjct: 472 ADCDSYCKASKGKLKIN 488
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 156 (60.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 51/180 (28%), Positives = 71/180 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+ N GG C C GY+ + C C C G S L +++
Sbjct: 814 QCVCKPNVGGRRCSECVEGYFYQPQNRSFL-CLPCNCDRTGTV------NGSLLCDKSTG 866
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GH--ADICDAES 119
+ LG GL + ++ YH + G+F C C C+ G ICD S
Sbjct: 867 QCPCKLG---VTGLHCNQCESHR---YH---LTVGSFQGCQMCECDPLGTLPGTICDPLS 917
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP----CVQLDDDQVVCSE 175
G+C C N G C +C G+Y + G T C C C G C L Q VC +
Sbjct: 918 GQCPCLPNRQGRRCNQCQPGFYISP--GNATGCLPCSCHTTGAVNHICNSLTG-QCVCQD 974
Score = 150 (57.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/193 (27%), Positives = 75/193 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ + G C +C G+Y N E C C C G +D D ++ N +
Sbjct: 661 QCNCKRHVSGRQCNQCQNGFY-NLQEWDPDGCSPCNCNTSGT---VDGD-ITCHPNSGQC 715
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAESG 120
+ K+ + G R H G+ + C PC CN H + C+ SG
Sbjct: 716 KCKANVIGLRC--------DHCNF-GFKFLQSFND--DGCEPCQCNLHGSVNRLCNPLSG 764
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG--PCVQLD--DDQVVC--- 173
+C C+ G C+ C +YG L+ T CK C C G P D Q VC
Sbjct: 765 QCECKKEAKGLQCDTCREHFYG--LDA--TGCKACDCDVAGSRPGTVCDAWTGQCVCKPN 820
Query: 174 ------SECPRGY 180
SEC GY
Sbjct: 821 VGGRRCSECVEGY 833
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 53/184 (28%), Positives = 76/184 (41%)
Query: 7 CQDNTGGDNCERCARGYYGN--ALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
C+ NT G NCE C ++ A A+ C+ C C D+V G R
Sbjct: 608 CEHNTAGKNCELCKDYFFRQVGADPSAIDVCRPCDC-----------DKV---GTRNSSF 653
Query: 65 IKSALGG--NRTRGLALTRQTHYQLTGYHH--EPTSGGAFSRCVPCNCN--GHAD---IC 115
+ +GG N R ++ RQ + G+++ E G C PCNCN G D C
Sbjct: 654 LCDQIGGQCNCKRHVS-GRQCNQCQNGFYNLQEWDPDG----CSPCNCNTSGTVDGDITC 708
Query: 116 DAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVVCS 174
SG+C C+ N G C+ C G+ L+ D C+ C C G +L +
Sbjct: 709 HPNSGQCKCKANVIGLRCDHCNFGF--KFLQSFNDDGCEPCQCNLHGSVNRLCNPLSGQC 766
Query: 175 ECPR 178
EC +
Sbjct: 767 ECKK 770
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G +C +C Y + G+ C+ C C G D +S
Sbjct: 867 QCPCKLGVTGLHCNQCESHRY-HLTVGSFQGCQMCECDPLGTLPGTICDPLSG------- 918
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHAD-ICDAESG 120
+ NR +G R+ + G++ P G A + C+PC+C+ G + IC++ +G
Sbjct: 919 --QCPCLPNR-QG----RRCNQCQPGFYISP--GNA-TGCLPCSCHTTGAVNHICNSLTG 968
Query: 121 RCICQD-NTGGDNCERCARGYYG-NALEGAVTDCKQCPCPNQG 161
+C+CQD + G +C+ C Y+G ++L G C+ C C G
Sbjct: 969 QCVCQDASIAGQSCDYCKDLYFGFDSLTGR---CQPCNCHLSG 1008
Score = 114 (45.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 103 CVPCNCN--GH--ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
C C+C+ G +CDA +G+C+C+ N GG C C GY+ + C C C
Sbjct: 792 CKACDCDVAGSRPGTVCDAWTGQCVCKPNVGGRRCSECVEGYFYQPQNRSFL-CLPCNCD 850
Query: 159 NQG 161
G
Sbjct: 851 RTG 853
Score = 56 (24.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 4 RCIC-QDN-TGGDNCERCARGYYGNALEGA----VTDCKQCPC 40
RC+C Q++ T G +C+RC Y + +CK C C
Sbjct: 535 RCLCSQESFTEGLHCDRCLPLYNNKPFRQSDHVHAFNCKPCEC 577
>UNIPROTKB|H0YAQ5 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 Pfam:PF06008 GO:GO:0030155
GO:GO:0030334 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0045995 GO:GO:0005606
EMBL:Z99289 EMBL:AL590106 HGNC:HGNC:6484 ChiTaRS:LAMA4
Ensembl:ENST00000521732 Uniprot:H0YAQ5
Length = 187
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 30/70 (42%), Positives = 38/70 (54%)
Query: 101 SRCVPCNCNGHADI------CDAESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTDCK 153
S C C+C+G++D CD +G+C C NT G CERCA GYYG+A +C
Sbjct: 2 STCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDAR--IAKNCA 59
Query: 154 QCPCPNQGPC 163
C C GPC
Sbjct: 60 VCNCGG-GPC 68
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 145 (56.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 52/198 (26%), Positives = 81/198 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAV-TDCKQC-PCPNQGPCVQLDDDQVSNL-GNRT 61
C C+ NT G C+RC +Y + A + +C PC N C NL R
Sbjct: 298 CECKHNTEGPECDRCKPFHYDRPWQRATGKEANECLPC-N---C---------NLHARRC 344
Query: 62 RIRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--G 110
R ++ L G ++ G+ + R HY G++ + R C C+C+ G
Sbjct: 345 RFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRACKACDCHPVG 404
Query: 111 HAD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + V C + P + ++
Sbjct: 405 AAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPVAPCIKIPVIKPTAVISTTEE 462
Query: 170 QVVC-SECPRGYGGEKMS 186
C S C G K++
Sbjct: 463 PADCDSYCKPLKGNLKIN 480
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 50/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 351
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY GY+ + + C C+C+ G
Sbjct: 352 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGA 411
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + + C + P P +++
Sbjct: 412 AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPVAPPTTAASSVEEP 469
Query: 170 QVVCSECPRGYGGEKMS 186
+ S C G K++
Sbjct: 470 EDCDSYCKASKGKLKIN 486
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 50/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 351
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY GY+ + + C C+C+ G
Sbjct: 352 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGA 411
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + + C + P P +++
Sbjct: 412 AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPVAPPTTAASSVEEP 469
Query: 170 QVVCSECPRGYGGEKMS 186
+ S C G K++
Sbjct: 470 EDCDSYCKASKGKLKIN 486
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 50/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 351
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY G++ + + C C+C+ G
Sbjct: 352 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGA 411
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + + C + P P +++
Sbjct: 412 AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPVAPPTTAASSVEEP 469
Query: 170 QVVCSECPRGYGGEKMS 186
+ S C G KM+
Sbjct: 470 EDCDSYCKASKGKLKMN 486
>UNIPROTKB|P46531 [details] [associations]
symbol:NOTCH1 "Neurogenic locus notch homolog protein 1"
species:9606 "Homo sapiens" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0009912 "auditory receptor cell fate commitment" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0010001 "glial cell
differentiation" evidence=IEA] [GO:0014807 "regulation of
somitogenesis" evidence=IEA] [GO:0021915 "neural tube development"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0031069 "hair
follicle morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032495 "response to muramyl dipeptide"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0042640 "anagen" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045618 "positive regulation of keratinocyte differentiation"
evidence=IEA] [GO:0045955 "negative regulation of calcium
ion-dependent exocytosis" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IEA]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA] [GO:0060768 "regulation of epithelial
cell proliferation involved in prostate gland development"
evidence=IEA] [GO:0070986 "left/right axis specification"
evidence=IEA] [GO:0072017 "distal tubule development" evidence=IEA]
[GO:0072044 "collecting duct development" evidence=IEA] [GO:0072144
"glomerular mesangial cell development" evidence=IEA] [GO:0072602
"interleukin-4 secretion" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001889 "liver development" evidence=IEA] [GO:0002040
"sprouting angiogenesis" evidence=IEA] [GO:0002437 "inflammatory
response to antigenic stimulus" evidence=IEA] [GO:0003162
"atrioventricular node development" evidence=IEA] [GO:0003219
"cardiac right ventricle formation" evidence=IEA] [GO:0003270
"Notch signaling pathway involved in regulation of secondary heart
field cardioblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0007386 "compartment pattern specification" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007440 "foregut
morphogenesis" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
[GO:0006955 "immune response" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;TAS] [GO:0007219
"Notch signaling pathway" evidence=IMP;TAS] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=ISS] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=ISS] [GO:0060253
"negative regulation of glial cell proliferation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:2000974 "negative
regulation of pro-B cell differentiation" evidence=ISS] [GO:0030513
"positive regulation of BMP signaling pathway" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP;IDA] [GO:0046427 "positive regulation of JAK-STAT
cascade" evidence=ISS] [GO:2000737 "negative regulation of stem
cell differentiation" evidence=IMP] [GO:0002193 "MAML1-RBP-Jkappa-
ICN1 complex" evidence=IDA] [GO:0097150 "neuronal stem cell
maintenance" evidence=IEP] [GO:0019899 "enzyme binding"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001047 "core
promoter binding" evidence=ISS] [GO:0043086 "negative regulation of
catalytic activity" evidence=ISS] [GO:0004857 "enzyme inhibitor
activity" evidence=ISS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISS] [GO:0050768 "negative regulation of
neurogenesis" evidence=ISS] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=ISS] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007220 "Notch receptor processing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0003184 "pulmonary valve morphogenesis" evidence=IMP]
[GO:0003192 "mitral valve formation" evidence=IMP] [GO:0060412
"ventricular septum morphogenesis" evidence=IMP] [GO:0061314 "Notch
signaling involved in heart development" evidence=IMP] [GO:0003180
"aortic valve morphogenesis" evidence=IMP] [GO:0003169 "coronary
vein morphogenesis" evidence=ISS] [GO:0003208 "cardiac ventricle
morphogenesis" evidence=ISS] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=ISS] [GO:0060982 "coronary artery
morphogenesis" evidence=ISS] [GO:0001837 "epithelial to mesenchymal
transition" evidence=ISS] [GO:0003222 "ventricular trabecula
myocardium morphogenesis" evidence=ISS] [GO:0001190 "RNA polymerase
II transcription factor binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0003273 "cell migration involved in endocardial cushion
formation" evidence=ISS] [GO:0007368 "determination of left/right
symmetry" evidence=ISS] [GO:1901201 "regulation of extracellular
matrix assembly" evidence=ISS] [GO:0030279 "negative regulation of
ossification" evidence=ISS] [GO:0060842 "arterial endothelial cell
differentiation" evidence=ISS] [GO:0003160 "endocardium
morphogenesis" evidence=ISS] [GO:0003209 "cardiac atrium
morphogenesis" evidence=ISS] [GO:0003214 "cardiac left ventricle
morphogenesis" evidence=ISS] [GO:0003344 "pericardium
morphogenesis" evidence=ISS] [GO:0060843 "venous endothelial cell
differentiation" evidence=ISS] [GO:0061384 "heart trabecula
morphogenesis" evidence=ISS] [GO:0003207 "cardiac chamber
formation" evidence=ISS] [GO:0030335 "positive regulation of cell
migration" evidence=ISS] [GO:0060956 "endocardial cell
differentiation" evidence=ISS] [GO:0003157 "endocardium
development" evidence=ISS] [GO:0003181 "atrioventricular valve
morphogenesis" evidence=ISS] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation" evidence=ISS]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISS]
[GO:0060979 "vasculogenesis involved in coronary vascular
morphogenesis" evidence=ISS] [GO:0010718 "positive regulation of
epithelial to mesenchymal transition" evidence=IMP] [GO:0010812
"negative regulation of cell-substrate adhesion" evidence=IDA]
[GO:0001947 "heart looping" evidence=ISS] [GO:0003213 "cardiac
right atrium morphogenesis" evidence=ISS] [GO:0003241 "growth
involved in heart morphogenesis" evidence=ISS] [GO:0003256
"regulation of transcription from RNA polymerase II promoter
involved in myocardial precursor cell differentiation"
evidence=ISS] [GO:0055008 "cardiac muscle tissue morphogenesis"
evidence=ISS] [GO:0060045 "positive regulation of cardiac muscle
cell proliferation" evidence=ISS] [GO:0060411 "cardiac septum
morphogenesis" evidence=ISS] [GO:0007221 "positive regulation of
transcription of Notch receptor target" evidence=ISS] [GO:0014031
"mesenchymal cell development" evidence=ISS] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=ISS] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISS] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IDA] [GO:2000811
"negative regulation of anoikis" evidence=IMP] Reactome:REACT_2001
Reactome:REACT_691 Reactome:REACT_71 InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111102 GO:GO:0005576
GO:GO:0005654 GO:GO:0000139 GO:GO:0006955
Pathway_Interaction_DB:ps1pathway GO:GO:0005789 GO:GO:0071372
eggNOG:COG0666 GO:GO:0031100 GO:GO:0004857 GO:GO:0001669
GO:GO:0032496 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045665 GO:GO:0005509
GO:GO:0004872 GO:GO:0003700 GO:GO:0007283 GO:GO:0019899
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122 GO:GO:0072144
GO:GO:0030513 GO:GO:0045603 GO:GO:0010718 PROSITE:PS01186
GO:GO:0007220 GO:GO:0042246 GO:GO:0030335 GO:GO:0001047
GO:GO:0001190 GO:GO:0030279 GO:GO:0046427 PROSITE:PS00010
GO:GO:0001947 GO:GO:0006367 GO:GO:0003160 GO:GO:0060979
GO:GO:0010812 GO:GO:0072044 GO:GO:0072017 GO:GO:0048709
GO:GO:0045668 GO:GO:0002052 GO:GO:2000811 GO:GO:0010832
GO:GO:0060045 GO:GO:0003181 GO:GO:0048711 GO:GO:0045662
GO:GO:0048715 GO:GO:0030514 EMBL:AL592301 GO:GO:0032495
GO:GO:0003214 Reactome:REACT_2155 Pfam:PF12661 GO:GO:0060412
GO:GO:0031960 GO:GO:0060982 GO:GO:0021515 GO:GO:0097150
GO:GO:0061314 GO:GO:0003344 GO:GO:0003222 GO:GO:0003180
GO:GO:0003273 GO:GO:0060253 GO:GO:0003198 GO:GO:0003192
SUPFAM:SSF90193 GO:GO:0048708 GO:GO:2000974 GO:GO:2000737
GO:GO:0060842 GO:GO:0003184 GO:GO:0060948 GO:GO:0061419 PDB:2F8X
PDB:3NBN PDB:3V79 PDBsum:2F8X PDBsum:3NBN PDBsum:3V79 GO:GO:0002193
GO:GO:0003241 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 EMBL:AF308602 EMBL:AL354671
EMBL:M73980 EMBL:AB209873 IPI:IPI00412982 PIR:A40043
RefSeq:NP_060087.3 UniGene:Hs.495473 PDB:1PB5 PDB:1TOZ PDB:1YYH
PDB:2F8Y PDB:2HE0 PDB:2VJ3 PDB:3ETO PDB:3I08 PDB:3L95 PDBsum:1PB5
PDBsum:1TOZ PDBsum:1YYH PDBsum:2F8Y PDBsum:2HE0 PDBsum:2VJ3
PDBsum:3ETO PDBsum:3I08 PDBsum:3L95 ProteinModelPortal:P46531
SMR:P46531 DIP:DIP-29919N IntAct:P46531 MINT:MINT-1417018
STRING:P46531 PhosphoSite:P46531 DMDM:206729936 PaxDb:P46531
PRIDE:P46531 Ensembl:ENST00000277541 GeneID:4851 KEGG:hsa:4851
UCSC:uc004chz.3 CTD:4851 GeneCards:GC09M139388 H-InvDB:HIX0008549
HGNC:HGNC:7881 HPA:CAB008112 HPA:CAB022466 MIM:109730 MIM:190198
neXtProt:NX_P46531 Orphanet:1244 PharmGKB:PA31683 OMA:HGGYNCV
OrthoDB:EOG4HX504 EvolutionaryTrace:P46531 GenomeRNAi:4851
NextBio:18684 Bgee:P46531 CleanEx:HS_NOTCH1 Genevestigator:P46531
GermOnline:ENSG00000148400 GO:GO:0003207 GO:GO:0003213
GO:GO:0003169 GO:GO:0060956 GO:GO:0007221 GO:GO:0003264
GO:GO:1901201 GO:GO:0003256 GO:GO:0060843 Uniprot:P46531
Length = 2555
Score = 152 (58.6 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 50/185 (27%), Positives = 71/185 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 768 CKDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGTCI----DDVA--GYKCNCLLP 820
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + G + +FS CV C C+ + C+
Sbjct: 821 YT-GATCEVVLAPCAPSPCRNGGECRQSEDYESFS-CV-CPTGWQGQTCEVDINECVLSP 877
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ GG C C GY G E + DC+ PC N G C D +C
Sbjct: 878 CRHGASCQNTHGGYRCH-CQAGYSGRNCETDIDDCRPNPCHNGGSCT--DGINTAFCDCL 934
Query: 178 RGYGG 182
G+ G
Sbjct: 935 PGFRG 939
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 55/188 (29%), Positives = 80/188 (42%)
Query: 5 CICQDNTGGDNCER----CARG--YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSN 56
C+C + G++C CA ++G V C CP+ G L+D +SN
Sbjct: 321 CVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASF-YCECPHGRTGLLCHLNDACISN 379
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICD 116
N S N G A+ +GY +G A S+ V C+ A+ C+
Sbjct: 380 PCNEG-----SNCDTNPVNGKAICTCP----SGY-----TGPACSQDVD-ECSLGANPCE 424
Query: 117 AESGRCICQDNT-GGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVVCS 174
+G+CI NT G C+ C +GY G E V +C PC N C+ Q+ + Q +C
Sbjct: 425 -HAGKCI---NTLGSFECQ-CLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICM 479
Query: 175 ECPRGYGG 182
P GY G
Sbjct: 480 --P-GYEG 484
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 44/181 (24%), Positives = 62/181 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-----SNLGNRT 61
C+D C C GY G+ E + +C PC + G C D+ + G
Sbjct: 580 CKDGVATFTC-LCRPGYTGHHCETNINECSSQPCRHGGTCQDRDNAYLCFCLKGTTGPNC 638
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
I + G L + Y+ EP G+ C G+ C G
Sbjct: 639 EINLDDCASSPCDSGTCLDKIDGYECAC---EPGYTGSMCNINIDECAGNP--CH-NGGT 692
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
C +D G C RC GY+ V +C PC + G C D +C G+
Sbjct: 693 C--EDGINGFTC-RCPEGYHDPTCLSEVNECNSNPCVH-GAC--RDSLNGYKCDCDPGWS 746
Query: 182 G 182
G
Sbjct: 747 G 747
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/78 (34%), Positives = 36/78 (46%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +C +C GY+G + +C PC N G C+
Sbjct: 1142 CEDLVDECSPSPCQNG-ATCTDYLGGYSC-KCVAGYHGVNCSEEIDECLSHPCQNGGTCL 1199
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1200 DLPNTYK-CS-CPRGTQG 1215
Score = 110 (43.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 27/74 (36%), Positives = 34/74 (45%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
D+ + +S C+ CQD G C C +GY G + V C PC N G C Q
Sbjct: 1021 DVNECDSQPCLHGGTCQDGCGSYRCT-CPQGYTGPNCQNLVHWCDSSPCKNGGKCWQTHT 1079
Query: 169 DQVVCSECPRGYGG 182
Q C ECP G+ G
Sbjct: 1080 -QYRC-ECPSGWTG 1091
Score = 103 (41.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/81 (30%), Positives = 34/81 (41%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC + + C S C+ C D+ G C C Y G E + C PC N G
Sbjct: 787 NCQTNINEC--ASNPCLNQGTCIDDVAGYKCN-CLLPYTGATCEVVLAPCAPSPCRNGGE 843
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
C Q +D + CP G+ G+
Sbjct: 844 CRQSEDYESFSCVCPTGWQGQ 864
Score = 91 (37.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 36/112 (32%), Positives = 43/112 (38%)
Query: 82 QTHYQLTGYHHEPTSGGAFSRC-VPC-NCNGHADICDAESGR-C----ICQDNTGGDNCE 134
QTH Q Y E SG C VP +C A + R C +C D +C
Sbjct: 1076 QTHTQ---YRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHHC- 1131
Query: 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186
RC GY G+ E V +C PC N C C +C GY G S
Sbjct: 1132 RCQAGYTGSYCEDLVDECSPSPCQNGATCTDYLGGYS-C-KCVAGYHGVNCS 1181
Score = 83 (34.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CQD G C C +GY G + V C PC N G C Q
Sbjct: 1036 CQDGCGSYRCT-CPQGYTGPNCQNLVHWCDSSPCKNGGKCWQ 1076
Score = 63 (27.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G+ G E DC + C N G CV
Sbjct: 960 CTDCVDSYTCT-CPAGFSGIHCENNTPDCTESSCFNGGTCV 999
Score = 63 (27.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D G C C GY G E +C PC + G C+
Sbjct: 467 CLDQIGEFQCI-CMPGYEGVHCEVNTDECASSPCLHNGRCL 506
Score = 62 (26.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG NC C G+ G + DC C + C
Sbjct: 312 CHNTHGGYNCV-CVNGWTGEDCSENIDDCASAACFHGATC 350
Score = 59 (25.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D C C G+ G+ + V +C PC + G C
Sbjct: 998 CVDGINSFTC-LCPPGFTGSYCQHDVNECDSQPCLHGGTC 1036
Score = 58 (25.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 14/37 (37%), Positives = 16/37 (43%)
Query: 13 GDNCERCA--RGYYGNALEGAVTDCKQCPCPNQGPCV 47
GD CA G+ G E + DC C N G CV
Sbjct: 237 GDVTHECACLPGFTGQNCEENIDDCPGNNCKNGGACV 273
Score = 57 (25.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 12/40 (30%), Positives = 14/40 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G C C + G E C PC N G C
Sbjct: 195 CHNEVGSYRCV-CRATHTGPNCERPYVPCSPSPCQNGGTC 233
Score = 47 (21.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 15/44 (34%), Positives = 16/44 (36%)
Query: 5 CICQDNTG-GDNCERCARGYYGN-ALEGAVTDCKQCPCPNQGPC 46
C D G D CA G+ G L C PC N G C
Sbjct: 74 CHVVDRRGVADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTC 117
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 144 (55.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 50/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 303 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 350
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY GY+ + + C C+C+ G
Sbjct: 351 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKACKACDCHPVGA 410
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + + C + P P +++
Sbjct: 411 AGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQS--RSPIAPCIKIPVAPPTTAASSVEEP 468
Query: 170 QVVCSECPRGYGGEKMS 186
+ S C G K++
Sbjct: 469 EDCDSYCKASKGKLKIN 485
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 144 (55.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 50/197 (25%), Positives = 79/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 303 CECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 350
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY GY+ + + + + C C+C+ G
Sbjct: 351 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKACDCHPVGA 410
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
A C+ +G+C C+D G C RCA GY + + C + P ++
Sbjct: 411 AGKTCNQTTGQCPCKDGVTGITCNRCANGYQQS--RSPIAPCIKIPIAPPTTTASSTEEP 468
Query: 171 VVC-SECPRGYGGEKMS 186
C S C G K++
Sbjct: 469 SDCESYCKASKGKLKIN 485
>UNIPROTKB|F1NHS1 [details] [associations]
symbol:F1NHS1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02046435 EMBL:AADN02046436
EMBL:AADN02046437 EMBL:AADN02046438 EMBL:AADN02046439
EMBL:AADN02046440 EMBL:AADN02046441 EMBL:AADN02046442
IPI:IPI00597520 ProteinModelPortal:F1NHS1
Ensembl:ENSGALT00000039424 Uniprot:F1NHS1
Length = 738
Score = 145 (56.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 58/195 (29%), Positives = 70/195 (35%)
Query: 9 DNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSA 68
D G C C GY G E A+ C Q PC N G C D G+R R A
Sbjct: 353 DPLGSYRCA-CPIGYKGRDCEVALDGCSQNPCANGGTCQPQD-------GDRDGFRCLCA 404
Query: 69 LG--GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCN-----CNGHADICDAESG 120
G G R + + H G +G C+ P + C D C AE
Sbjct: 405 AGFEGPSCRTASDPCKEHSCENG--GSCVAGATNYTCLCPAHYTGDFCEQPPDFCSAELS 462
Query: 121 RC----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
C C + G CE CA GY G DC+ C N CV D+ C
Sbjct: 463 PCQHGSTCIPTSQGPRCE-CAPGYVGTNCSKDFDDCQDHRCQNNARCV--DEVNGYSCLC 519
Query: 177 PRGYGGE--KMSPGA 189
GY G+ +M P A
Sbjct: 520 AEGYSGQLCEMPPHA 534
Score = 107 (42.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/105 (32%), Positives = 44/105 (41%)
Query: 94 PTSGGAFSRCVP----CNCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNAL 145
PTS G C P NC+ D D + RC C D G +C CA GY G
Sbjct: 472 PTSQGPRCECAPGYVGTNCS--KDFDDCQDHRCQNNARCVDEVNGYSC-LCAEGYSGQLC 528
Query: 146 E------GAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
E G C++ C N CV+ + +C +C G+GG K
Sbjct: 529 EMPPHAAGQPGLCERAECQNGAACVERGS-RALC-QCLPGFGGPK 571
Score = 69 (29.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 7 CQDNTG---GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
CQ G G C CA G+ G + A CK+ C N G CV
Sbjct: 389 CQPQDGDRDGFRC-LCAAGFEGPSCRTASDPCKEHSCENGGSCV 431
>ZFIN|ZDB-GENE-990415-173 [details] [associations]
symbol:notch1a "notch homolog 1a" species:7955
"Danio rerio" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA;IGI] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050793 "regulation of developmental process" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0001756 "somitogenesis" evidence=IGI;IMP] [GO:0021986 "habenula
development" evidence=IMP] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0048699 "generation of neurons"
evidence=IMP] [GO:0021523 "somatic motor neuron differentiation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0048259 "regulation of
receptor-mediated endocytosis" evidence=IGI] [GO:0055016 "hypochord
development" evidence=IMP] [GO:0042663 "regulation of endodermal
cell fate specification" evidence=IMP] [GO:0048337 "positive
regulation of mesodermal cell fate specification" evidence=IMP]
[GO:0031016 "pancreas development" evidence=IMP] [GO:0001840
"neural plate development" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0021531 "spinal cord radial
glial cell differentiation" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IGI]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022362
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 ZFIN:ZDB-GENE-990415-173 GO:GO:0016021
GO:GO:0006355 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 GO:GO:0006351 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0001756 GO:GO:0007368 PROSITE:PS01186 InterPro:IPR003645
SMART:SM00274 PROSITE:PS00010 GO:GO:0048259 InterPro:IPR019931
TIGRFAMs:TIGR01167 Pfam:PF12661 GO:GO:0031017 GO:GO:0021523
GO:GO:0001840 GO:GO:0042663 SUPFAM:SSF90193 GO:GO:0048936
GO:GO:0055016 EMBL:X69088 IPI:IPI00483779 PIR:S42612
RefSeq:NP_571516.1 UniGene:Dr.137595 UniGene:Dr.75753
ProteinModelPortal:P46530 SMR:P46530 STRING:P46530 GeneID:30718
KEGG:dre:30718 CTD:30718 HOGENOM:HOG000234369 HOVERGEN:HBG052650
KO:K02599 NextBio:20807067 GO:GO:0021986 GO:GO:0048337
GO:GO:0021531 InterPro:IPR024600 Pfam:PF11936 Uniprot:P46530
Length = 2437
Score = 136 (52.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 54/192 (28%), Positives = 76/192 (39%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
+C++ GG C RC G+ G E + DC+ PC N G C D+V+ +
Sbjct: 881 VCENLRGGFQC-RCNPGFTGALCENDIDDCEPNPCSNGGVC----QDRVNGF-------V 928
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPT-SGGAFSRCV---PCNCN-GHADI-CDAES 119
L G RG ++ P +GG + CV C+C G + I C+ +
Sbjct: 929 CVCLAG--FRGERCAEDIDECVSA----PCRNGGNCTDCVNSYTCSCPAGFSGINCEINT 982
Query: 120 GRCI---------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
C C D +C C G+ GN + V +C PC N G C Q
Sbjct: 983 PDCTESSCFNGGTCVDGISSFSCV-CLPGFTGNYCQHDVNECDSRPCQNGGSC-QDGYGT 1040
Query: 171 VVCSECPRGYGG 182
C+ CP GY G
Sbjct: 1041 YKCT-CPHGYTG 1051
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 50/188 (26%), Positives = 72/188 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVSNLGNRTRIR 64
C D GG C C G+ G EG V +C PC G CVQL +D R
Sbjct: 1242 CVDRVGGYGCV-CPAGFVGERCEGDVNECLSDPCDPSGSYNCVQLIND--------FRCE 1292
Query: 65 IKSALGGNRTRGLAL-TRQTHYQLTGYHH--EPTSGGAFSRCVPCNCNGHADICDAES-G 120
++ G R + + T + G T G +C P +G + D++S G
Sbjct: 1293 CRTGYTGKRCETVFNGCKDTPCKNGGTCAVASNTKHGYICKCQP-GYSGSSCEYDSQSCG 1351
Query: 121 RCICQDNT---GGDNCERC--ARGYYGNALEGAV-TDCKQCPCPNQGPCVQLDDDQVVCS 174
C++ G RC A G+ G+ + + + C PC N G C + D
Sbjct: 1352 SLRCRNGATCVSGHLSPRCLCAPGFSGHECQTRMDSPCLVNPCYNGGTCQPISDAPFYRC 1411
Query: 175 ECPRGYGG 182
CP + G
Sbjct: 1412 SCPANFNG 1419
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 46/182 (25%), Positives = 63/182 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDD----QVSNLGNRT 61
C D C C G+ +C PC + G C+ Q++ + +G
Sbjct: 691 CIDGVNSFTC-LCPDGFRDATCLSQHNECSSNPCIH-GSCLDQINSYRCVCEAGWMGRNC 748
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
I I L G T +GY +G + C N N A G
Sbjct: 749 DININECLSNPCVNGGTCKDMT----SGYLCTCRAGFSGPNC-QMNINECASNPCLNQGS 803
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYG 181
CI D+ G C C Y G E + C PC N G C + +D Q CP G+
Sbjct: 804 CI--DDVAGFKCN-CMLPYTGEVCENVLAPCSPRPCKNGGVCRESEDFQSFSCNCPAGWQ 860
Query: 182 GE 183
G+
Sbjct: 861 GQ 862
Score = 119 (46.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 54/188 (28%), Positives = 76/188 (40%)
Query: 5 CICQDNTGGDNCER----CARGY--YGNALEGAVTD--CKQCPCPNQGPCVQLDDDQVSN 56
C+C + GD+C CA +G V C +CP G LDD +SN
Sbjct: 320 CVCVNGWTGDDCSENIDDCASAACSHGATCHDRVASFFC-ECPHGRTGLLCHLDDACISN 378
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICD 116
+ S N G A+ GY +G A ++ + C+ A+ C+
Sbjct: 379 PCQKG-----SNCDTNPVSGKAICTCP----PGY-----TGSACNQDID-ECSLGANPCE 423
Query: 117 AESGRCICQDNTGGD-NCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVVCS 174
GRC+ NT G C +C +GY G E V +CK PC N C+ Q+ +C
Sbjct: 424 -HGGRCL---NTKGSFQC-KCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICM 478
Query: 175 ECPRGYGG 182
P GY G
Sbjct: 479 --P-GYEG 483
Score = 118 (46.6 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +CE C GY+G + +C PC N G C+
Sbjct: 1140 CQEQVDECQPNPCQNG-ATCTDYLGGYSCE-CVPGYHGMNCSKEINECLSQPCQNGGTCI 1197
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1198 DLVNTYK-CS-CPRGTQG 1213
Score = 114 (45.2 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 28/67 (41%), Positives = 34/67 (50%)
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVVCSECP 177
GRC+ D GG C C G+ G EG V +C PC G CVQL +D C EC
Sbjct: 1240 GRCV--DRVGGYGCV-CPAGFVGERCEGDVNECLSDPCDPSGSYNCVQLIND-FRC-ECR 1294
Query: 178 RGYGGEK 184
GY G++
Sbjct: 1295 TGYTGKR 1301
Score = 110 (43.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 103 CVPCNCNGHA--DICDAESGRC---ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 157
C P H DI + S C +C+D C+ C GY G E + +C PC
Sbjct: 552 CTPGFSGIHCELDINECASSPCHYGVCRDGVASFTCD-CRPGYTGRLCETNINECLSQPC 610
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGG 182
N G C Q ++ +C+ CP+G G
Sbjct: 611 RNGGTC-QDRENAYICT-CPKGTTG 633
Score = 105 (42.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 28/90 (31%), Positives = 39/90 (43%)
Query: 106 CNCNG--HADICDAESGRCI---------CQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
CNC C+ + C+ C++ GG C RC G+ G E + DC+
Sbjct: 853 CNCPAGWQGQTCEVDINECVRNPCTNGGVCENLRGGFQC-RCNPGFTGALCENDIDDCEP 911
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
PC N G C Q + VC C G+ GE+
Sbjct: 912 NPCSNGGVC-QDRVNGFVCV-CLAGFRGER 939
Score = 103 (41.3 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 97 GGAFSRCVP----CNCNGHADICDAE---SGRCICQDNTGGDNCERCARGYYGNALEGAV 149
GG C+P C ++D C ++ +G+CI D +CE C +G+ G+ + V
Sbjct: 471 GGFHCICMPGYEGVFCQINSDDCASQPCLNGKCI--DKINSFHCE-CPKGFSGSLCQVDV 527
Query: 150 TDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
+C PC N C ++ C EC G+ G
Sbjct: 528 DECASTPCKNGAKCTD-GPNKYTC-ECTPGFSG 558
Score = 102 (41.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 26/81 (32%), Positives = 32/81 (39%)
Query: 112 ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ- 170
+D CD SG C CE C GY G E CK PC N G C + +
Sbjct: 1271 SDPCDP-SGSYNCVQLINDFRCE-CRTGYTGKRCETVFNGCKDTPCKNGGTCAVASNTKH 1328
Query: 171 -VVCSECPRGYGGEKMSPGAQ 190
+C +C GY G +Q
Sbjct: 1329 GYIC-KCQPGYSGSSCEYDSQ 1348
Score = 95 (38.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C D GG +CE C GY+G + +C PC N G C+ L
Sbjct: 1158 CTDYLGGYSCE-CVPGYHGMNCSKEINECLSQPCQNGGTCIDL 1199
Score = 91 (37.1 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 25/78 (32%), Positives = 32/78 (41%)
Query: 108 CNGHADICDA---ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C + CD+ ++G CQD G C C GY G + V C PC N G C
Sbjct: 1016 CQHDVNECDSRPCQNGGS-CQDGYGTYKCT-CPHGYTGLNCQSLVRWCDSSPCKNGGSCW 1073
Query: 165 QLDDDQVVCSECPRGYGG 182
Q C +C G+ G
Sbjct: 1074 Q-QGASFTC-QCASGWTG 1089
Score = 86 (35.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 25/75 (33%), Positives = 33/75 (44%)
Query: 112 ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
A +C +G+C+ NT C RC GY G+ + V +C+ PC N C
Sbjct: 1111 AVLC-RHAGQCVDAGNT--HLC-RCQAGYTGSYCQEQVDECQPNPCQNGATCTDYLGGYS 1166
Query: 172 VCSECPRGYGGEKMS 186
C EC GY G S
Sbjct: 1167 -C-ECVPGYHGMNCS 1179
Score = 79 (32.9 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 17/42 (40%), Positives = 18/42 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CQD G C C GY G + V C PC N G C Q
Sbjct: 1034 CQDGYGTYKCT-CPHGYTGLNCQSLVRWCDSSPCKNGGSCWQ 1074
Score = 76 (31.8 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ +T C C G+ G E V DC Q C N GPC+
Sbjct: 232 CVQTSDTT-HTCS-CLPGFTGQTCEHNVDDCTQHACENGGPCI 272
Score = 72 (30.4 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D +CE C +G+ G+ + V +C PC N C
Sbjct: 503 CIDKINSFHCE-CPKGFSGSLCQVDVDECASTPCKNGAKC 541
Score = 69 (29.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D G + RC GY G+ + V +C+ PC N C
Sbjct: 1120 CVD-AGNTHLCRCQAGYTGSYCQEQVDECQPNPCQNGATC 1158
Score = 67 (28.6 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG +C C GY G + DC PC N G C+
Sbjct: 466 CLDQIGGFHCI-CMPGYEGVFCQINSDDCASQPCLN-GKCI 504
Score = 64 (27.6 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 15 NCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
+C C G+ G E + +C + PC N G C L
Sbjct: 852 SCN-CPAGWQGQTCEVDINECVRNPCTNGGVCENL 885
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG +C C G+ G+ + DC C + C
Sbjct: 311 CHNTIGGFHCV-CVNGWTGDDCSENIDDCASAACSHGATC 349
Score = 40 (19.1 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 176 CPRGYGGEKMSPG 188
CP Y G K SPG
Sbjct: 2120 CPNTYLGIKPSPG 2132
Score = 36 (17.7 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 4 RCICQDNTGGDNCE 17
+C C T G +CE
Sbjct: 1204 KCSCPRGTQGVHCE 1217
>UNIPROTKB|F1M7Y4 [details] [associations]
symbol:Notch1 "Neurogenic locus notch homolog protein 1"
species:10116 "Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0050793 "regulation of
developmental process" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01984
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 RGD:3187 GO:GO:0016021 GO:GO:0030154
GO:GO:0006355 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0050793 Pfam:PF12661 SUPFAM:SSF90193
InterPro:IPR024600 Pfam:PF11936 IPI:IPI00197189
Ensembl:ENSRNOT00000019137 ArrayExpress:F1M7Y4 Uniprot:F1M7Y4
Length = 2208
Score = 122 (48.0 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +C +C GY+G+ + +C PC N G C+
Sbjct: 1065 CEDEVDECSPNPCQNG-ATCTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCI 1122
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1123 DLTNTYK-CS-CPRGTQG 1138
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 45/185 (24%), Positives = 65/185 (35%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-----SNLGNR 60
+C+D C C GY G+ E + +C PC + G C D+ + G
Sbjct: 559 LCKDGVATFTC-LCQPGYTGHHCETNINECHSQPCRHGGTCQDRDNYYLCLCLKGTTGPN 617
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC---DA 117
I + G L + Y+ EP G+ CN + D C
Sbjct: 618 CEINLDDCASNPCDSGTCLDKIDGYECAC---EPGYTGSM-------CNVNIDECAGSPC 667
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
+G C+D G C RC GY+ V +C PC + G C D +C
Sbjct: 668 HNGGT-CEDGIAGFTC-RCPEGYHDPTCLSEVNECNSNPCIH-GAC--RDGLNGYKCDCA 722
Query: 178 RGYGG 182
G+ G
Sbjct: 723 PGWSG 727
Score = 106 (42.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/80 (33%), Positives = 37/80 (46%)
Query: 107 NCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
NC+ + + C ES C+ C+D T G C C G+ G + + +C PC NQG
Sbjct: 729 NCDINNNEC--ESNPCVNGGTCKDMTSGYVCT-CREGFSGPNCQTNINECASNPCLNQGT 785
Query: 163 CVQLDDDQVVCSECPRGYGG 182
C+ DD CP Y G
Sbjct: 786 CI--DDVAGYKCNCPLPYTG 803
Score = 102 (41.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
D+ + +S C+ CQD+ G C C +GY G + V C PC N G C Q +
Sbjct: 944 DVNECDSRPCLHGGTCQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNT 1002
Query: 169 DQVVCSECPRGYGG 182
Q C EC G+ G
Sbjct: 1003 -QYHC-ECRSGWTG 1014
Score = 98 (39.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVVCSECPRGYG 181
C D GG C C G+ G EG V +C PC +G CVQ +D C EC G+
Sbjct: 1167 CVDQVGGYTCT-CPPGFVGERCEGDVNECLSNPCDPRGTQNCVQRVND-FHC-ECRAGHT 1223
Query: 182 GEK 184
G +
Sbjct: 1224 GRR 1226
Score = 96 (38.9 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C D GG +C +C GY+G+ + +C PC N G C+ L
Sbjct: 1083 CTDYLGGFSC-KCVAGYHGSNCSEEINECLSQPCQNGGTCIDL 1124
Score = 82 (33.9 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CQD+ G C C +GY G + V C PC N G C Q
Sbjct: 959 CQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSAPCKNGGKCWQ 999
Score = 82 (33.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 35/106 (33%), Positives = 40/106 (37%)
Query: 98 GAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCE--------RCARGYYGNALEGAV 149
G FS C C H C E C+ Q G C C RG G E V
Sbjct: 1088 GGFS-C-KCVAGYHGSNCSEEINECLSQPCQNGGTCIDLTNTYKCSCPRGTQGVHCEINV 1145
Query: 150 TDC-------KQCP-CPNQGPCVQLDDDQV---VCSECPRGYGGEK 184
DC + P C N G CV DQV C+ CP G+ GE+
Sbjct: 1146 DDCHPPLDPASRSPKCFNNGTCV----DQVGGYTCT-CPPGFVGER 1186
Score = 70 (29.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C D C C GY G+ E V +C PC N C
Sbjct: 1044 LCVDEEDKHYCH-CQAGYTGSYCEDEVDECSPNPCQNGATC 1083
Score = 63 (27.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G+ G E DC + C N G CV
Sbjct: 883 CTDCVDSYTCT-CPTGFNGIHCENNTPDCTESSCFNGGTCV 922
Score = 62 (26.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 15/37 (40%), Positives = 16/37 (43%)
Query: 13 GDNCERCA--RGYYGNALEGAVTDCKQCPCPNQGPCV 47
GD CA G+ G E V DC C N G CV
Sbjct: 217 GDTTHECACLPGFAGQNCEENVDDCPGNNCKNGGACV 253
Score = 62 (26.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C ++ GG NC C G+ G + DC C C
Sbjct: 292 CHNSHGGYNCV-CVNGWTGEDCSENIDDCASAACFQGATC 330
Score = 58 (25.5 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D C C G+ G+ + V +C PC + G C
Sbjct: 921 CVDGINSFTC-LCPPGFTGSYCQYDVNECDSRPCLHGGTC 959
Score = 55 (24.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 12/40 (30%), Positives = 14/40 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + G C C + G E C PC N G C
Sbjct: 175 CHNEIGSYRCA-CRATHTGPHCELPYVPCSPSPCQNGGTC 213
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 5 CICQDNTGGDNCE----RCARG--YYGNALEGAVT 33
C+C + G +CE C +YG +G T
Sbjct: 532 CVCTEGYTGTHCEVDIDECDPDPCHYGLCKDGVAT 566
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 142 (55.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 51/197 (25%), Positives = 80/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGA-VTDCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 281 CDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLACN---C---------NLHARRCR 328
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY G++ + + + C C+C+ G
Sbjct: 329 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGA 388
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
A C+ +G+C C+D G C RCA+G+ + V C + P N V +
Sbjct: 389 AGKTCNQTTGQCPCKDGVTGLTCNRCAKGFQQS--RSPVAPCIKIPAINPTSLVTSTEAP 446
Query: 171 VVC-SECPRGYGGEKMS 186
C S C G K++
Sbjct: 447 ADCDSYCKPAKGNYKIN 463
>UNIPROTKB|F1MXV1 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:DAAA02059311 EMBL:DAAA02059312
EMBL:DAAA02059313 EMBL:DAAA02059314 EMBL:DAAA02059315
EMBL:DAAA02059316 EMBL:DAAA02059317 EMBL:DAAA02059318
EMBL:DAAA02059319 EMBL:DAAA02059320 EMBL:DAAA02059321
IPI:IPI00699369 Ensembl:ENSBTAT00000023559 Uniprot:F1MXV1
Length = 1180
Score = 138 (53.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 43/145 (29%), Positives = 64/145 (44%)
Query: 7 CQD--NTGGDNC-ERCARG---YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSNLG 58
C D NTG +C E +RG G + D CP + +Q Q + G
Sbjct: 919 CNDPSNTGRGHCIEGSSRGPMKLVGMLNNEMLLDTSLCPKEKNYEWSFIQCPACQCN--G 976
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ T I + + L +Q + GY+ +PT+GG +C C C+GHA+IC
Sbjct: 977 HSTCINNNVC---EQCKNLTTGKQCQDCMPGYYGDPTNGG---QCTACTCSGHANICHMH 1030
Query: 119 SGRCICQDN-TGGDNCERC-ARGYY 141
+G+C C GD C+ C A +Y
Sbjct: 1031 TGKCFCTTKGIKGDQCQFCKATHFY 1055
Score = 120 (47.3 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 43/169 (25%), Positives = 64/169 (37%)
Query: 24 YGNALEGAVTDCKQCPCPNQGPCVQ-LDD------DQVSNLGNRTRIRIKSALGGNRTRG 76
YG LE C C C Q L+ + SN G I S+ G + G
Sbjct: 885 YGQCLEWQTATCSPQNCSGLRTCGQCLEQPGCGWCNDPSNTGRGHCIE-GSSRGPMKLVG 943
Query: 77 LALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI-CQDNTGGDNCER 135
+ L + + E +F +C C CNGH+ C + C C++ T G C+
Sbjct: 944 M-LNNEMLLDTSLCPKEKNYEWSFIQCPACQCNGHST-C-INNNVCEQCKNLTTGKQCQD 1000
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
C GYYG+ G C C C + + C+ +G G++
Sbjct: 1001 CMPGYYGDPTNGG--QCTACTCSGHANICHMHTGKCFCTT--KGIKGDQ 1045
Score = 50 (22.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD 34
C+C GD C+ C + G +TD
Sbjct: 37 CLCDPGWVGDQCQHCQGRFKLTEPSGYLTD 66
Score = 39 (18.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 5 CICQDNTGGDNC 16
C+C D+ G +C
Sbjct: 227 CVCNDSWQGPDC 238
>UNIPROTKB|J9PA37 [details] [associations]
symbol:NOTCH4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PRINTS:PR01452
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275 GO:GO:0030154
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
GeneTree:ENSGT00690000101660 SUPFAM:SSF90193 InterPro:IPR022355
PRINTS:PR01987 EMBL:AAEX03008227 EMBL:AAEX03008228
Ensembl:ENSCAFT00000045934 Uniprot:J9PA37
Length = 1672
Score = 138 (53.6 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 51/189 (26%), Positives = 68/189 (35%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNLGNRTR 62
R CQD G +C C+ GY G + + C Q PCP+ C+Q Q L T
Sbjct: 686 RATCQDGPQGPHC-LCSPGYTGGTCQTLMDLCAQKPCPHNSYCLQTGPSFQCLCLQGWTG 744
Query: 63 IRIKSALGGNRTRGLAL-TRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDA 117
L + L+ T + G + F C P C + C++
Sbjct: 745 PLCNLPLSFCQKAALSQGTAASSLCQNGGLCIDSGSSYFCHCPPGFQGSTCQDRVNPCES 804
Query: 118 E----SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
CI Q N G C+ CA GY G C+ PC N G C C
Sbjct: 805 RPCQHGATCIAQPN--GYLCQ-CAPGYNGQNCSKESNACQSQPCHNHGTCTPKPGGYY-C 860
Query: 174 SECPRGYGG 182
+ CP G+ G
Sbjct: 861 T-CPPGFVG 868
Score = 42 (19.8 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 5 CICQDNTGGDNCE 17
C+C GG CE
Sbjct: 212 CVCVSGWGGTGCE 224
Score = 37 (18.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 5 CICQDNTGGDNCER 18
C+CQ G C +
Sbjct: 289 CLCQPGYSGPTCHQ 302
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 129 (50.5 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 31/85 (36%), Positives = 41/85 (48%)
Query: 103 CVPCNCNGHADICDA--ESGRCICQDNTGGDNCERCA-RGYYGNALEGAVTDCKQCPCPN 159
C+ CNCN + D E+G C C++ G C+ C Y+ V D Q C N
Sbjct: 471 CIECNCNQIGSVHDRCNETGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDDDQLLCQN 530
Query: 160 QGPCVQLDDDQVVCSECPRGYGGEK 184
G CVQ +Q C+ CPRGY G +
Sbjct: 531 GGTCVQ---NQR-CA-CPRGYTGAR 550
Score = 107 (42.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/87 (31%), Positives = 37/87 (42%)
Query: 106 CNCNGHADICD----AESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC 157
C C GH++ C C+ C+ NT G +C+ C GYY N + D C +C C
Sbjct: 418 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNG-SAELDDENVCIECNC 476
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEK 184
G ++ C EC G G K
Sbjct: 477 NQIGSVHDRCNETGFC-ECREGAAGPK 502
Score = 57 (25.1 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 4 RCICQDNTGGDNCERCARGY 23
+C C+ NT G +C +C R +
Sbjct: 304 QCECEHNTTGPDCGKCKRSF 323
>ZFIN|ZDB-GENE-011128-3 [details] [associations]
symbol:jag2 "jagged 2" species:7955 "Danio rerio"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA;NAS] [GO:0005112 "Notch binding"
evidence=IEA] [GO:0007154 "cell communication" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IMP] [GO:0021514 "ventral spinal
cord interneuron differentiation" evidence=IMP] [GO:0048793
"pronephros development" evidence=IMP] [GO:0001889 "liver
development" evidence=IGI;IMP] [GO:0031016 "pancreas development"
evidence=IGI] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 InterPro:IPR026219 Pfam:PF00008 Pfam:PF01414
Pfam:PF07645 Pfam:PF07657 PRINTS:PR02059 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152
ZFIN:ZDB-GENE-011128-3 GO:GO:0016021 GO:GO:0007219 GO:GO:0005509
GO:GO:0001889 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0021522
PROSITE:PS01186 PROSITE:PS00010 GO:GO:0031016 GO:GO:0048793
Pfam:PF12661 HSSP:P01132 GO:GO:0021514 HOVERGEN:HBG031645
EMBL:AF090432 EMBL:CU458993 IPI:IPI00501275 UniGene:Dr.8287
STRING:Q9YHU2 InParanoid:Q9YHU2 NextBio:20796976 Uniprot:Q9YHU2
Length = 1254
Score = 145 (56.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 49/182 (26%), Positives = 72/182 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQVSN---LGNRT 61
C + G C C G+ G + +C PC G C+ L++ + V +G
Sbjct: 354 CHEVPTGFECH-CPPGWEGPTCAKDMDECASSPCAQGGTCIDLENGFECVCPPQWVGKTC 412
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
+I +G + + GYH + G A C N NG C ++G
Sbjct: 413 QIDANECMG----KPCVNAHSCKNMIGGYHCDCFQGWAGQNC-DINLNGCHGQC--QNG- 464
Query: 122 CICQDNT-GGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C++ GG +C+ C G+ G E + C PC N G C + D VC ECP Y
Sbjct: 465 ATCKELVHGGYHCQ-CPAGFVGLHCEVSRNKCASGPCQNGGRC-HVILDSFVC-ECPSNY 521
Query: 181 GG 182
G
Sbjct: 522 AG 523
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 55/186 (29%), Positives = 67/186 (36%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
+C G C C Y G E CK PC C S+ G R I
Sbjct: 547 LCYSLPGDFYCA-CPEDYEGKTCENRKDHCKMTPCQVIDSCTIAVASNSSDGGVR---HI 602
Query: 66 KSALGGNRTRGLA-----LTRQTHYQLTG-YHHEPTSGGAFSRCV--PCNCNGHADICDA 117
S + G R ++ T TG Y HE + CV PC NG I
Sbjct: 603 NSNVCGPHGRCISQPGGNFTCTCELGFTGTYCHENVND-----CVSNPCR-NGGTCIDGI 656
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
S +C C D GD C N V +C + PC N G CV L +D C EC
Sbjct: 657 SSFQCFCPDGWEGDLCSI-------N-----VNECSRSPCKNGGHCVDLVND-FYC-ECA 702
Query: 178 RGYGGE 183
G+ G+
Sbjct: 703 NGWKGK 708
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 50/197 (25%), Positives = 79/197 (40%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVT-DCKQCPCPNQGPCVQLDDDQVSNL-GNRTR 62
C C+ NT G C+RC +Y + A + +C N C NL R R
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACN---C---------NLHARRCR 351
Query: 63 IRIKS-ALGGNRTRGLALT-------RQTHYQLTGYHHEPTSGGAFSR-CVPCNCN--GH 111
++ L G ++ G+ L R HY GY + + C C+C+ G
Sbjct: 352 FNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGA 411
Query: 112 AD-ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCP-CPNQGPCVQLDDD 169
A C+ +G+C C+D G C RCA+GY + + C + P P +++
Sbjct: 412 AGKTCNQTTGQCPCKDGVTGVTCNRCAKGYQQS--RSPIAPCIKIPVAPPTTAASSVEEP 469
Query: 170 QVVCSECPRGYGGEKMS 186
+ S C G K++
Sbjct: 470 EDCDSYCKASKGKLKIN 486
>UNIPROTKB|I3LB93 [details] [associations]
symbol:NOTCH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072104 "glomerular capillary formation" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0048661 GO:GO:0030900 GO:GO:0045665
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0048663 GO:GO:0072104 Pfam:PF12661
GeneTree:ENSGT00700000104305 EMBL:CU467692
ProteinModelPortal:I3LB93 Ensembl:ENSSSCT00000029966 Uniprot:I3LB93
Length = 1250
Score = 141 (54.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 56/188 (29%), Positives = 72/188 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+ NT G +C RGY G E V +C PC NQ C LD +G T I
Sbjct: 368 RCV---NTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATC--LD-----RIGQFTCI 417
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG---HADICDAESG 120
+ G + + + G + +G FS P +G D+ + S
Sbjct: 418 CMAGFTGTYCEVDMDECQSSPCVNGGVCKDKVNG--FSCTCPSGFSGAMCQLDVDECAST 475
Query: 121 RCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
C C D G C RCA G+ G E V DC PC + G CV D C
Sbjct: 476 PCRNGAKCVDQPDGYEC-RCAEGFEGTVCERNVDDCSPDPC-HHGRCV--DGIASFSCAC 531
Query: 177 PRGYGGEK 184
GY G +
Sbjct: 532 APGYTGTR 539
Score = 116 (45.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 49/167 (29%), Positives = 63/167 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSN-----LGNRT 61
CQ GG CE C GY G+ E V +C PC + G C+ L + + LG
Sbjct: 1011 CQGYMGGYVCE-CPAGYTGDNCEDDVDECASQPCQHGGFCIDLVARYLCSCPPGTLGVLC 1069
Query: 62 RIRIKSA-LGGNRTRG-LALTRQTHYQLTG-YHHEPTSGGAFSRC-VPCN-CNGHADICD 116
I LG L T L G + G RC N C A C
Sbjct: 1070 EINEDDCGLGSPLDLDPRCLHNGTCVDLVGGFRCSCPPGYTGLRCEADINECRPGA--CH 1127
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
A R QD GG +C C G+ G + ++ C+ PC + G C
Sbjct: 1128 AAHTRDCLQDPGGGFHC-LCHAGFTGPRCQTVLSPCESQPCQHGGQC 1173
Score = 113 (44.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 108 CNGHADICDAES---GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C + D C + GRC+ D +C CA GY G E V +C+ PC + G C+
Sbjct: 503 CERNVDDCSPDPCHHGRCV--DGIASFSCA-CAPGYTGTRCESQVDECRSQPCRHGGKCL 559
Query: 165 QLDDDQVVCSECPRGYGG 182
L D + +C CP G G
Sbjct: 560 DLVD-KYLC-RCPPGTTG 575
Score = 110 (43.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 33/88 (37%), Positives = 42/88 (47%)
Query: 96 SGGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQC 155
+GGA + V C+ A+ C+ GRC+ NT G +C RGY G E V +C
Sbjct: 345 TGGACDQDVD-ECSIGANPCE-HLGRCV---NTQGSFLCQCGRGYTGPRCETDVNECLSG 399
Query: 156 PCPNQGPCVQLDD-DQVVCSECPRGYGG 182
PC NQ C LD Q C C G+ G
Sbjct: 400 PCRNQATC--LDRIGQFTCI-CMAGFTG 424
Score = 108 (43.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 33/127 (25%), Positives = 44/127 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-----SNLGNRT 61
C D +C CA GY G E V +C+ PC + G C+ L D + G
Sbjct: 520 CVDGIASFSCA-CAPGYTGTRCESQVDECRSQPCRHGGKCLDLVDKYLCRCPPGTTGVNC 578
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLT---GYHHEPTSGGAFSRCVPCNCNGHADICDAE 118
+ I T GL Y G+ P + C C D E
Sbjct: 579 EVNIDDCASNPCTFGLCRDGLNRYDCVCQPGFTG-PLCNMEINECASSPCGEGGSCVDGE 637
Query: 119 SG-RCIC 124
+G RC+C
Sbjct: 638 NGFRCLC 644
Score = 102 (41.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 107 NCNGHADICDAESGRC--ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
+C D C A+ + CQ GG CE C GY G+ E V +C PC + G C+
Sbjct: 992 HCEQEVDPCLAQPCQHGGTCQGYMGGYVCE-CPAGYTGDNCEDDVDECASQPCQHGGFCI 1050
Query: 165 QLDDDQVVCSECPRG 179
L + +CS CP G
Sbjct: 1051 DLVA-RYLCS-CPPG 1063
Score = 101 (40.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 32/99 (32%), Positives = 39/99 (39%)
Query: 101 SRCVP--CNCNGHAD-------ICDAESG----RCI----CQDNTGGDNCERCARGYYGN 143
S CVP C GH + +C SG C+ CQD G +C C G+ G
Sbjct: 734 SPCVPNPCEHGGHCESATGQLVVCSCPSGWQADPCLNGGSCQDGVGSFSCS-CLPGFAGP 792
Query: 144 ALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
V +C PC G C C+ CP GYGG
Sbjct: 793 RCARDVDECLSSPC-GPGTCTD-HVASFTCT-CPPGYGG 828
Score = 94 (38.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 26/70 (37%), Positives = 32/70 (45%)
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+C A G+C+ D G C C G G+ E V C PC + G C Q VC
Sbjct: 966 LCQA-GGQCV--DKDGSHYCV-CPEGRTGSHCEQEVDPCLAQPCQHGGTC-QGYMGGYVC 1020
Query: 174 SECPRGYGGE 183
ECP GY G+
Sbjct: 1021 -ECPAGYTGD 1029
Score = 69 (29.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 123 ICQDNTGGDNCERCARGYYGNALEGAVT-D-CKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
+C D GG C C G+ G ++T D C+ PC C D C+ CP G
Sbjct: 669 VCHDAPGGFRCV-CEPGWSGPQCSQSLTRDACESHPCRAGSTCTS-DATGFHCT-CPPGV 725
Query: 181 GG---EKMSP 187
G E +SP
Sbjct: 726 QGRQCELLSP 735
Score = 68 (29.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D+ C C GY G E + DC C N G CV
Sbjct: 811 CTDHVASFTCT-CPPGYGGFRCEQDLPDCSPSSCFNGGTCV 850
Score = 65 (27.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
CQD G +C C G+ G V +C PC G C
Sbjct: 774 CQDGVGSFSCS-CLPGFAGPRCARDVDECLSSPC-GPGTC 811
Score = 64 (27.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 20/74 (27%), Positives = 25/74 (33%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
D+ D C C D C C GY G + C PC + G C
Sbjct: 834 DLPDCSPSSCFNGGTCVDGVTSFTC-LCRPGYTGAHCQHEADPCLSRPCLHGGICTAAHP 892
Query: 169 DQVVCSECPRGYGG 182
C+ CP G+ G
Sbjct: 893 G-FRCA-CPEGFTG 904
Score = 64 (27.6 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
+C+D +C C G+ G + +C PC G CV
Sbjct: 594 LCRDGLNRYDCV-CQPGFTGPLCNMEINECASSPCGEGGSCV 634
Score = 63 (27.2 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
IC G C C G+ G + V C + PC N G C +
Sbjct: 886 ICTAAHPGFRCA-CPEGFTGAQCQTLVDWCSRVPCQNGGRCAR 927
Score = 59 (25.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 19/82 (23%), Positives = 30/82 (36%)
Query: 108 CNGHADICDAESGR-CICQDNTGGDNCER----CARG--YYGNALEGAVTDCKQCPCPNQ 160
C D + C+C + G +CE+ C +G +G + C CP
Sbjct: 967 CQAGGQCVDKDGSHYCVCPEGRTGSHCEQEVDPCLAQPCQHGGTCQGYMGGYV-CECPAG 1025
Query: 161 GPCVQLDDDQVVCSECPRGYGG 182
+DD C+ P +GG
Sbjct: 1026 YTGDNCEDDVDECASQPCQHGG 1047
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG +C C G+ G + + DC C + C
Sbjct: 252 CFNTLGGHSCV-CVNGWTGESCSQNIDDCATAVCFHGATC 290
Score = 40 (19.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 5/15 (33%), Positives = 8/15 (53%)
Query: 4 RCICQDNTGGDNCER 18
RC+C+ G C +
Sbjct: 678 RCVCEPGWSGPQCSQ 692
>UNIPROTKB|F1PLX4 [details] [associations]
symbol:NOTCH4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PRINTS:PR01452
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258
SMART:SM00004 SMART:SM00179 SMART:SM00181 SMART:SM00248
InterPro:IPR000152 GO:GO:0016021 GO:GO:0007275 GO:GO:0030154
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
GeneTree:ENSGT00690000101660 SUPFAM:SSF90193 OMA:ACPQAHT
InterPro:IPR022355 PRINTS:PR01987 EMBL:AAEX03008227
EMBL:AAEX03008228 Ensembl:ENSCAFT00000001228 Uniprot:F1PLX4
Length = 1822
Score = 138 (53.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/189 (26%), Positives = 68/189 (35%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-QVSNLGNRTR 62
R CQD G +C C+ GY G + + C Q PCP+ C+Q Q L T
Sbjct: 811 RATCQDGPQGPHC-LCSPGYTGGTCQTLMDLCAQKPCPHNSYCLQTGPSFQCLCLQGWTG 869
Query: 63 IRIKSALGGNRTRGLAL-TRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDA 117
L + L+ T + G + F C P C + C++
Sbjct: 870 PLCNLPLSFCQKAALSQGTAASSLCQNGGLCIDSGSSYFCHCPPGFQGSTCQDRVNPCES 929
Query: 118 E----SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
CI Q N G C+ CA GY G C+ PC N G C C
Sbjct: 930 RPCQHGATCIAQPN--GYLCQ-CAPGYNGQNCSKESNACQSQPCHNHGTCTPKPGGYY-C 985
Query: 174 SECPRGYGG 182
+ CP G+ G
Sbjct: 986 T-CPPGFVG 993
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 5 CICQDNTGGDNCE 17
C+C GG CE
Sbjct: 335 CVCVSGWGGTGCE 347
Score = 37 (18.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 5/14 (35%), Positives = 7/14 (50%)
Query: 5 CICQDNTGGDNCER 18
C+CQ G C +
Sbjct: 412 CLCQPGYSGPTCHQ 425
>UNIPROTKB|F1NRS3 [details] [associations]
symbol:DLL1 "Delta-like protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0005112
"Notch binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007267 "cell-cell signaling" evidence=IEA]
[GO:0007386 "compartment pattern specification" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0045608
"negative regulation of auditory receptor cell differentiation"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0070986 "left/right axis specification" evidence=IEA]
[GO:0072014 "proximal tubule development" evidence=IEA] [GO:0072070
"loop of Henle development" evidence=IEA] [GO:0097150 "neuronal
stem cell maintenance" evidence=IEA] InterPro:IPR000742
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414 Pfam:PF07657
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0005886 GO:GO:0031410 GO:GO:0007219
GO:GO:0005509 GO:GO:0007267 GO:GO:0045747 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0045638
GeneTree:ENSGT00690000101660 OMA:YCDQCIR EMBL:AADN02035624
EMBL:AADN02035625 IPI:IPI00592713 Ensembl:ENSGALT00000018232
Ensembl:ENSGALT00000037704 Uniprot:F1NRS3
Length = 728
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/186 (27%), Positives = 67/186 (36%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIKSA 68
NTG G C GY G++ E + +C PC N G C L+ N
Sbjct: 313 NTGQGSYTCSCRPGYTGSSCEIEINECDANPCKNGGSCTDLE--------NSYSCTCPPG 364
Query: 69 LGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPC-----NCNGHADICDAE--SG 120
G A+T G G +S RC P NC D C + +
Sbjct: 365 FYGKNCELSAMTCADGPCFNGGRCTDNPDGGYSCRC-PLGYSGFNCEKKIDYCSSSPCAN 423
Query: 121 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGY 180
C D C+ C G+ G + V DC PC N G C +D C+ CP GY
Sbjct: 424 GAQCVDLGNSYICQ-CQAGFTGRHCDDNVDDCASFPCVNGGTCQDGVNDYS-CT-CPPGY 480
Query: 181 GGEKMS 186
G+ S
Sbjct: 481 NGKNCS 486
Score = 138 (53.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 55/193 (28%), Positives = 73/193 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D +C C G+YG E + C PC N G C D S +
Sbjct: 350 CTDLENSYSCT-CPPGFYGKNCELSAMTCADGPCFNGGRCTDNPDGGYS---------CR 399
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP------CNCNG-----HAD-- 113
LG + G ++ Y + P + GA +CV C C H D
Sbjct: 400 CPLGYS---GFNCEKKIDYCSSS----PCANGA--QCVDLGNSYICQCQAGFTGRHCDDN 450
Query: 114 ICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
+ D S C+ CQD +C C GY G V+ C+ PC N C + +
Sbjct: 451 VDDCASFPCVNGGTCQDGVNDYSCT-CPPGYNGKNCSTPVSRCEHNPCHNGATCHERSN- 508
Query: 170 QVVCSECPRGYGG 182
+ VC EC RGYGG
Sbjct: 509 RYVC-ECARGYGG 520
Score = 108 (43.1 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 31/107 (28%), Positives = 38/107 (35%)
Query: 91 HHEPTSGGAFSR-----CVPCNCN-GHA-DICDAESGRCICQDNTGGDNCE--------R 135
HH+P GA C+C G+ C+ E C G +C
Sbjct: 301 HHKPCKNGATCTNTGQGSYTCSCRPGYTGSSCEIEINECDANPCKNGGSCTDLENSYSCT 360
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C G+YG E + C PC N G C D C CP GY G
Sbjct: 361 CPPGFYGKNCELSAMTCADGPCFNGGRCTDNPDGGYSC-RCPLGYSG 406
Score = 100 (40.3 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 106 CNCN-GHADI-CDAESGRCI----CQD-----NTG-GDNCERCARGYYGNALEGAVTDCK 153
CNC G + C+ + C C++ NTG G C GY G++ E + +C
Sbjct: 281 CNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTGQGSYTCSCRPGYTGSSCEIEINECD 340
Query: 154 QCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
PC N G C L++ C+ CP G+ G+
Sbjct: 341 ANPCKNGGSCTDLENSYS-CT-CPPGFYGK 368
Score = 52 (23.4 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C+ C R Y L G QC C
Sbjct: 250 CKCRVGWQGRYCDECIR--YPGCLHGTCQQPWQCNC 283
>ZFIN|ZDB-GENE-990415-183 [details] [associations]
symbol:notch1b "notch homolog 1b" species:7955
"Danio rerio" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050793 "regulation of developmental process" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0001946
"lymphangiogenesis" evidence=IMP] [GO:0048936 "peripheral nervous
system neuron axonogenesis" evidence=IGI] [GO:0021654 "rhombomere
boundary formation" evidence=IGI] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152
ZFIN:ZDB-GENE-990415-183 GO:GO:0016021 GO:GO:0006355
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001946 PROSITE:PS01186
PROSITE:PS00010 GO:GO:0001568 GO:GO:0050793 Pfam:PF12661
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 GO:GO:0048936
InterPro:IPR024600 Pfam:PF11936 GO:GO:0021654 EMBL:BX119981
EMBL:CR396583 IPI:IPI00615364 Ensembl:ENSDART00000050855
ArrayExpress:F1QCA7 Bgee:F1QCA7 Uniprot:F1QCA7
Length = 2465
Score = 139 (54.0 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 50/185 (27%), Positives = 67/185 (36%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRI 65
ICQ++ G C C GY G E + DCK PC N G C D V N
Sbjct: 863 ICQNSIGSYKCS-CKAGYTGRNCETDIDDCKPNPCSNGGFC----KDAV----NAFACTC 913
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP----CNCNGHADICDAES-- 119
G R +++ G + C P +C + C S
Sbjct: 914 LPGFRGGRCEEDINECESNPCKNGANCTDCVNSYTCTCPPGFSGIHCENNTPDCTESSCF 973
Query: 120 --GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
G C+ D C C +G+ GN + + +C PC N G C Q C+ CP
Sbjct: 974 NGGTCV--DGINSFTC-LCPKGFTGNYCQHDINECDSRPCMNGGTC-QDSYGTYKCT-CP 1028
Query: 178 RGYGG 182
+GY G
Sbjct: 1029 QGYHG 1033
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/192 (25%), Positives = 74/192 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D GG +C C GY G + +C PC N G C+ D+++N +
Sbjct: 487 CLDQIGGFHCI-CMPGYEGVFCQINTDECASMPCLNNGKCI----DKINNY----QCECP 537
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV--P----CNCN-GHA-DICDAE 118
+ G+ Q + + P GA +C+ P C C G+ C+ +
Sbjct: 538 TGFSGS---------QCQFDIDECASTPCKNGA--KCMDGPNMYTCQCTEGYTGQHCETD 586
Query: 119 SGRCI--------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
C+ C+D C C G+ G E + +C PC N G C Q ++
Sbjct: 587 VDECLSNPCHYGTCKDGLASFTCV-CRAGFMGRLCEININECLSQPCQNGGTC-QDRENA 644
Query: 171 VVCSECPRGYGG 182
+C CP+G G
Sbjct: 645 YLCV-CPKGTAG 655
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 48/187 (25%), Positives = 69/187 (36%)
Query: 7 CQDN-TGGDNCERCARGYYGNALEGAVTDCK--QCPCPNQGPCVQLDDD-QVSNL----G 58
C N G C GY G A + V +C PC + G C+ Q L G
Sbjct: 407 CDTNPVNGKAICTCPLGYVGPACDQDVDECSLGANPCEHAGKCINTKGSFQCKCLQGYVG 466
Query: 59 NRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHH--EPTSGGAFSRCVPCNCNGHADICD 116
R + I L + A Q+ G+H P G F + C A +
Sbjct: 467 ARCELDINECLS-TPCQNDATCLD---QIGGFHCICMPGYEGVFCQINTDEC---ASMPC 519
Query: 117 AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
+G+CI D CE C G+ G+ + + +C PC N C +D + +C
Sbjct: 520 LNNGKCI--DKINNYQCE-CPTGFSGSQCQFDIDECASTPCKNGAKC--MDGPNMYTCQC 574
Query: 177 PRGYGGE 183
GY G+
Sbjct: 575 TEGYTGQ 581
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 48/185 (25%), Positives = 65/185 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL-----GNRT 61
C+D G NC C G+ G + +C+ PC N G C + V G
Sbjct: 750 CEDKVNGYNCI-CDSGWSGVNCDINNNECESNPCMNGGTCKDMTSGYVCTCRAGFSGPNC 808
Query: 62 RIRIKSALGGN-RTRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCVPCNCNGHADICDA 117
+ I +G + Y+ L Y + T + CV C A
Sbjct: 809 QTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGQ-TCEVDINECVKNPCRNDA----- 862
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
ICQ++ G C C GY G E + DCK PC N G C + C+ P
Sbjct: 863 -----ICQNSIGSYKCS-CKAGYTGRNCETDIDDCKPNPCSNGGFCKDAVN-AFACTCLP 915
Query: 178 RGYGG 182
GG
Sbjct: 916 GFRGG 920
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/88 (34%), Positives = 40/88 (45%)
Query: 106 CNCN-GHA-DICDAESGRCI---------CQDNTGGDNCERCARGYYGNALEGAVTDCKQ 154
C+C G+ C+ + CI C D GG +CE C GY+G + +C
Sbjct: 1111 CHCQAGYTGSYCEEQVDECIPNPCQNGATCTDYLGGYSCE-CVPGYHGVNCSDEINECLS 1169
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGG 182
PC N G C+ L + CS CPRG G
Sbjct: 1170 QPCQNGGTCIDLINTYK-CS-CPRGTQG 1195
Score = 101 (40.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI + +S C+ CQD+ G C C +GY+G + V CK PC N G C Q
Sbjct: 1001 DINECDSRPCMNGGTCQDSYGTYKCT-CPQGYHGLNCQELVNWCKPSPCKNGGICRQ-SG 1058
Query: 169 DQVVCSECPRGYGG 182
+ C +C G+ G
Sbjct: 1059 TRYSC-QCQTGWTG 1071
Score = 101 (40.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 106 CNC-NGHADI-CDAESGRCI---CQ------DNTGGDNCERCARGYYGNALEGAVTDCKQ 154
C C G+ C+ + C+ CQ D GG +C C GY G + +C
Sbjct: 458 CKCLQGYVGARCELDINECLSTPCQNDATCLDQIGGFHCI-CMPGYEGVFCQINTDECAS 516
Query: 155 CPCPNQGPCV-QLDDDQVVCSECPRGYGGEK 184
PC N G C+ ++++ Q C ECP G+ G +
Sbjct: 517 MPCLNNGKCIDKINNYQ--C-ECPTGFSGSQ 544
Score = 87 (35.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
CQD+ G C C +GY+G + V CK PC N G C Q
Sbjct: 1016 CQDSYGTYKCT-CPQGYHGLNCQELVNWCKPSPCKNGGICRQ 1056
Score = 82 (33.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/73 (34%), Positives = 30/73 (41%)
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+C SG+C+ NT C C GY G+ E V +C PC N C C
Sbjct: 1095 LC-RNSGQCLDAGNT--HYCH-CQAGYTGSYCEEQVDECIPNPCQNGATCTDYLGGYS-C 1149
Query: 174 SECPRGYGGEKMS 186
EC GY G S
Sbjct: 1150 -ECVPGYHGVNCS 1161
Score = 77 (32.2 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 34/104 (32%), Positives = 41/104 (39%)
Query: 97 GGAFSRCVP----CNCNGHADICDAE----SGRCICQDNTGGDNCERCARGYYGNALEGA 148
GG CVP NC+ + C ++ G CI NT C C RG G E
Sbjct: 1145 GGYSCECVPGYHGVNCSDEINECLSQPCQNGGTCIDLINTY--KCS-CPRGTQGVHCEIN 1201
Query: 149 VTDCK--------QCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
+ DC + C NQG CV C CP GY GE+
Sbjct: 1202 IDDCTPFTDPITHEPKCFNQGRCVDRVGGYH-CI-CPPGYVGER 1243
Score = 63 (27.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG NC C G+ G+ + DC C C
Sbjct: 332 CLNTQGGYNCV-CVNGWTGDDCSENIDDCADAACHTGATC 370
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 5 CICQDNTGGDNCER----CARG--YYGNALEGAVTD--CKQCPCPNQGPCVQLDDDQVSN 56
C+C + GD+C CA + G V C +CP G LDD +SN
Sbjct: 341 CVCVNGWTGDDCSENIDDCADAACHTGATCHDRVASFLC-ECPHGRTGLLCHLDDACISN 399
Score = 50 (22.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 22 GYYGNALEGAVTDCKQCPCPNQGPCV 47
G+ G E + DC C N G CV
Sbjct: 268 GFSGQNCEENIDDCPDHRCLNGGTCV 293
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 49/192 (25%), Positives = 76/192 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL---GNR 60
+C C+ NT G +C +C + + + P P+ P N G+
Sbjct: 304 QCECEHNTTGPDCGKCKKNFRTRSWRAG----SYLPLPHGSPNACATAGSFGNCECYGHS 359
Query: 61 TR------IRIKSALG-GNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHAD 113
R + + + + + TRG H +L Y + + C+ CNCN
Sbjct: 360 NRCSYIDFLNVVTCVSCKHNTRG---QHCQHCRLGYYRNGSAELDDENVCIECNCNQIGS 416
Query: 114 ICDA--ESGRCICQDNTGGDNCERCA-RGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
+ D E+G C C++ G C+ C Y+ V D Q C N G C+Q +Q
Sbjct: 417 VHDRCNETGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDDDQLLCQNGGTCLQ---NQ 473
Query: 171 VVCSECPRGYGG 182
C+ CPRGY G
Sbjct: 474 R-CA-CPRGYTG 483
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 52/194 (26%), Positives = 76/194 (39%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDDQVSNLGNR 60
C CQ T G +C RC Y + A C C C + + + G R
Sbjct: 274 CDCQHGTEGPDCGRCKPFYCDRPWQRATAREAHACLACSCNGHARRCRFNMELYRLSGRR 333
Query: 61 TRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS---RCVPCNCN--GHAD-I 114
+ + + T G R HY G++ +P G A S C C+C+ G A
Sbjct: 334 SGGVCLNCR--HNTAG----RHCHYCREGFYRDP--GRALSDRRACRACDCHPVGAAGKT 385
Query: 115 CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD--DDQVV 172
C+ +G+C C+D G C RCA G+ + V C + P P GP + + Q
Sbjct: 386 CNQTTGQCPCKDGVTGLTCNRCAPGFQQS--RSPVAPCVKTPVP--GPTEESSPVEPQDC 441
Query: 173 CSECPRGYGGEKMS 186
S C G ++S
Sbjct: 442 DSHCKPARGSYRIS 455
>RGD|3188 [details] [associations]
symbol:Notch2 "notch 2" species:10116 "Rattus norvegicus"
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0001709 "cell fate determination" evidence=IDA] [GO:0001890
"placenta development" evidence=ISO] [GO:0001947 "heart looping"
evidence=ISO] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0002437 "inflammatory response to antigenic
stimulus" evidence=IEA;ISO] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA;ISO] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005887 "integral to
plasma membrane" evidence=IEA;ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA;ISO] [GO:0007050 "cell cycle arrest"
evidence=IEA;ISO;ISS] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO;ISS] [GO:0009887 "organ
morphogenesis" evidence=ISO;ISS] [GO:0009986 "cell surface"
evidence=IEA;ISO;ISS;TAS] [GO:0016049 "cell growth"
evidence=IEA;ISO;ISS] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound
healing" evidence=ISO] [GO:0042246 "tissue regeneration"
evidence=IEP] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0045672 "positive regulation of osteoclast
differentiation" evidence=ISO] [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=IEA;ISO;ISS] [GO:0046849
"bone remodeling" evidence=IEA;ISO] [GO:0050793 "regulation of
developmental process" evidence=IEA] [GO:0051059 "NF-kappaB binding"
evidence=ISO] [GO:0060413 "atrial septum morphogenesis"
evidence=IEA;ISO] [GO:0060674 "placenta blood vessel development"
evidence=IEA;ISO] [GO:0070986 "left/right axis specification"
evidence=ISO] [GO:0072602 "interleukin-4 secretion" evidence=IEA;ISO]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 Pfam:PF00008 Pfam:PF00023
Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 RGD:3188 GO:GO:0005634 GO:GO:0008285
GO:GO:0009986 GO:GO:0005887 GO:GO:0006355 GO:GO:0002437
eggNOG:COG0666 GO:GO:0016049 GO:GO:0046849 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 GO:GO:0007050 GO:GO:0006351
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0043065 GO:GO:0009887
GO:GO:0030326 GO:GO:0007368 PROSITE:PS01186 GO:GO:0042246
PROSITE:PS00010 GO:GO:0006959 GO:GO:0050793 GO:GO:0001709
GO:GO:0046579 Pfam:PF12661 GO:GO:0002011 GO:GO:0072602
SUPFAM:SSF90193 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
InterPro:IPR022336 PRINTS:PR01985 EMBL:M93661 IPI:IPI00211689
PIR:A49128 RefSeq:NP_077334.1 UniGene:Rn.65930
ProteinModelPortal:Q9QW30 SMR:Q9QW30 STRING:Q9QW30 PhosphoSite:Q9QW30
PRIDE:Q9QW30 GeneID:29492 KEGG:rno:29492 UCSC:RGD:3188
InParanoid:Q9QW30 NextBio:609375 ArrayExpress:Q9QW30
Genevestigator:Q9QW30 GermOnline:ENSRNOG00000018835 Uniprot:Q9QW30
Length = 2471
Score = 147 (56.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/193 (27%), Positives = 75/193 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C D GG CE C GY G E V +C+ PC N G C+ L + + G R +
Sbjct: 1164 CSDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLC 1222
Query: 64 --RIKSALGGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGHADI 114
I G G + R Y L G+ E G + C+ PC+ G D
Sbjct: 1223 EENIDDCAGAPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGD-INECLSNPCSSEGSLDC 1281
Query: 115 CDAESG-RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQV 171
++ +C+C+ G +CE + C Q PC N G C + D
Sbjct: 1282 IQLKNNYQCVCRSAFTGRHCETF------------LDVCPQKPCLNGGTCAVASNVPDGF 1329
Query: 172 VCSECPRGYGGEK 184
+C CP G+ G +
Sbjct: 1330 IC-RCPPGFSGAR 1341
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 52/185 (28%), Positives = 70/185 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G C C +G+ G + + +C PC NQG C LDD VS G +
Sbjct: 772 CNNLVNGYRCT-CKKGFKGYNCQVNIDECASNPCLNQGTC--LDD--VS--GYTCHCMLP 824
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPC----NCNGHADICDAES-- 119
G N LA + E + +F+ C P C D C ++
Sbjct: 825 YT-GKNCQTVLAPCSPNPCENAAVCKEAPNFESFTCLCAPGWQGQRCTVDVDECVSKPCM 883
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
IC + G CE C G+ G E + DC PC N G CV D C G
Sbjct: 884 NNGICHNTQGSYMCE-CPPGFSGMDCEEDINDCLANPCQNGGSCV--DKVNTFSCLCLPG 940
Query: 180 YGGEK 184
+ G+K
Sbjct: 941 FVGDK 945
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/95 (34%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 440 FHCECLKGYAGPRCEMDINEC--HSDPCQNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 493
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
V +C+ PC N G CV ++ C CP G+ G
Sbjct: 494 EVNECQSNPCVNNGQCVD-KVNRFQCL-CPPGFTG 526
Score = 111 (44.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 28/77 (36%), Positives = 34/77 (44%)
Query: 108 CNGHADICDAESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C D C + + C D GG CE C GY G E V +C+ PC N G C+
Sbjct: 1146 CEEQLDECASNPCQHGATCSDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCID 1204
Query: 166 LDDDQVVCSECPRGYGG 182
L + CS CP G G
Sbjct: 1205 LVN-HFKCS-CPPGTRG 1219
Score = 97 (39.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/74 (33%), Positives = 32/74 (43%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI + S C+ C D G C C GY G + V C PC N+G C Q +
Sbjct: 1025 DINECSSNPCLNSGTCVDGLGTYRCT-CPLGYTGKNCQTLVNLCSPSPCKNKGTCAQ-EK 1082
Query: 169 DQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1083 ARPRCL-CPPGWDG 1095
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 108 CNGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C+ + D CD + CQD C C GY G + +C PC N G C+ L
Sbjct: 567 CDENIDNCDPDPCHHGQCQDGIDSYTCI-CNPGYMGAICSDQIDECYSSPCLNDGRCIDL 625
Query: 167 DDDQVVCSECPRGYGG 182
+ C+ C G G
Sbjct: 626 VNGYQ-CN-CQPGTSG 639
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G + + +C PC + G C Q
Sbjct: 532 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGTLCDENIDNCDPDPC-HHGQC-QDGI 588
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 589 DSYTCI-CNPGYMG 601
Score = 84 (34.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 24/81 (29%), Positives = 32/81 (39%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
+C + D C S G C+ D +C C G+ G + +C PC N G
Sbjct: 983 HCENNIDECTESSCFNGGTCV--DGINSFSC-LCPVGFTGPFCLHDINECSSNPCLNSGT 1039
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
CV D CP GY G+
Sbjct: 1040 CV--DGLGTYRCTCPLGYTGK 1058
Score = 83 (34.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E V +C+ PC N G CV
Sbjct: 471 CLDKIGGFTC-LCMPGFKGVHCELEVNECQSNPCVNNGQCV 510
Score = 79 (32.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G C C GY G + V C PC N+G C Q
Sbjct: 1040 CVDGLGTYRCT-CPLGYTGKNCQTLVNLCSPSPCKNKGTCAQ 1080
Score = 69 (29.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G++G E + +C + C N G CV
Sbjct: 964 CSDYVNSYTCT-CPAGFHGVHCENNIDECTESSCFNGGTCV 1003
Score = 63 (27.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C + + G + C PC N G C Q D
Sbjct: 198 CLNLPGSYRCQ-CPQRFTGQHCDSPYVPCAPSPCVNGGTCRQTGD 241
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D +C C G+ G + +C PC N G CV
Sbjct: 1002 CVDGINSFSC-LCPVGFTGPFCLHDINECSSNPCLNSGTCV 1041
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G+ G + + DC PC N C+
Sbjct: 509 CVDKVNRFQC-LCPPGFTGPVCQIDIDDCSSTPCLNGAKCI 548
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 7 CQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ TG E C G+ G+ E + DC C N G CV
Sbjct: 236 CRQ-TGDFTSECHCLPGFEGSNCERNIDDCPNHKCQNGGVCV 276
Score = 61 (26.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-C-KQCPCPNQGPCVQLDDD 52
C+ Q G C RCA G+ G + + + C PC N G C L D
Sbjct: 79 CVTQAMLGKATC-RCAPGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSWD 127
Score = 55 (24.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ N G C RC G+ G + C++ C N G CV
Sbjct: 41 CVTYHN-GTGYC-RCPEGFLGEYCQHR-DPCEKNRCQNGGTCV 80
Score = 51 (23.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/59 (30%), Positives = 22/59 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNAL--EGAVTDCK---QCPCPN--QGPCVQLDDDQVSN 56
C+C G +CE N G D QC CP GP Q+D D S+
Sbjct: 480 CLCMPGFKGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSS 538
>UNIPROTKB|Q9QW30 [details] [associations]
symbol:Notch2 "Neurogenic locus notch homolog protein 2"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00023 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645
Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:3188 GO:GO:0005634 GO:GO:0008285 GO:GO:0009986 GO:GO:0005887
GO:GO:0006355 GO:GO:0002437 eggNOG:COG0666 GO:GO:0016049
GO:GO:0046849 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 GO:GO:0007050 GO:GO:0006351 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0043065 GO:GO:0009887 GO:GO:0030326
GO:GO:0007368 PROSITE:PS01186 GO:GO:0042246 PROSITE:PS00010
GO:GO:0006959 GO:GO:0050793 GO:GO:0001709 GO:GO:0046579
Pfam:PF12661 GO:GO:0002011 GO:GO:0072602 SUPFAM:SSF90193
HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4853 OrthoDB:EOG4Q58NH
InterPro:IPR022336 PRINTS:PR01985 EMBL:M93661 IPI:IPI00211689
PIR:A49128 RefSeq:NP_077334.1 UniGene:Rn.65930
ProteinModelPortal:Q9QW30 SMR:Q9QW30 STRING:Q9QW30
PhosphoSite:Q9QW30 PRIDE:Q9QW30 GeneID:29492 KEGG:rno:29492
UCSC:RGD:3188 InParanoid:Q9QW30 NextBio:609375 ArrayExpress:Q9QW30
Genevestigator:Q9QW30 GermOnline:ENSRNOG00000018835 Uniprot:Q9QW30
Length = 2471
Score = 147 (56.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 53/193 (27%), Positives = 75/193 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNL--GNRTRI- 63
C D GG CE C GY G E V +C+ PC N G C+ L + + G R +
Sbjct: 1164 CSDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLC 1222
Query: 64 --RIKSALGGNR--TRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCV--PCNCNGHADI 114
I G G + R Y L G+ E G + C+ PC+ G D
Sbjct: 1223 EENIDDCAGAPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGD-INECLSNPCSSEGSLDC 1281
Query: 115 CDAESG-RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD--DQV 171
++ +C+C+ G +CE + C Q PC N G C + D
Sbjct: 1282 IQLKNNYQCVCRSAFTGRHCETF------------LDVCPQKPCLNGGTCAVASNVPDGF 1329
Query: 172 VCSECPRGYGGEK 184
+C CP G+ G +
Sbjct: 1330 IC-RCPPGFSGAR 1341
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 52/185 (28%), Positives = 70/185 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C + G C C +G+ G + + +C PC NQG C LDD VS G +
Sbjct: 772 CNNLVNGYRCT-CKKGFKGYNCQVNIDECASNPCLNQGTC--LDD--VS--GYTCHCMLP 824
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVPC----NCNGHADICDAES-- 119
G N LA + E + +F+ C P C D C ++
Sbjct: 825 YT-GKNCQTVLAPCSPNPCENAAVCKEAPNFESFTCLCAPGWQGQRCTVDVDECVSKPCM 883
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
IC + G CE C G+ G E + DC PC N G CV D C G
Sbjct: 884 NNGICHNTQGSYMCE-CPPGFSGMDCEEDINDCLANPCQNGGSCV--DKVNTFSCLCLPG 940
Query: 180 YGGEK 184
+ G+K
Sbjct: 941 FVGDK 945
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/95 (34%), Positives = 44/95 (46%)
Query: 90 YHHEPTSGGAFSRC-VPCN-CNGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEG 147
+H E G A RC + N C H+D C ++ C D GG C C G+ G E
Sbjct: 440 FHCECLKGYAGPRCEMDINEC--HSDPCQNDA---TCLDKIGGFTC-LCMPGFKGVHCEL 493
Query: 148 AVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
V +C+ PC N G CV ++ C CP G+ G
Sbjct: 494 EVNECQSNPCVNNGQCVD-KVNRFQCL-CPPGFTG 526
Score = 111 (44.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 28/77 (36%), Positives = 34/77 (44%)
Query: 108 CNGHADICDAESGR--CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 165
C D C + + C D GG CE C GY G E V +C+ PC N G C+
Sbjct: 1146 CEEQLDECASNPCQHGATCSDFIGGYRCE-CVPGYQGVNCEYEVDECQNQPCQNGGTCID 1204
Query: 166 LDDDQVVCSECPRGYGG 182
L + CS CP G G
Sbjct: 1205 LVN-HFKCS-CPPGTRG 1219
Score = 97 (39.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/74 (33%), Positives = 32/74 (43%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI + S C+ C D G C C GY G + V C PC N+G C Q +
Sbjct: 1025 DINECSSNPCLNSGTCVDGLGTYRCT-CPLGYTGKNCQTLVNLCSPSPCKNKGTCAQ-EK 1082
Query: 169 DQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1083 ARPRCL-CPPGWDG 1095
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 108 CNGHADICDAES-GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C+ + D CD + CQD C C GY G + +C PC N G C+ L
Sbjct: 567 CDENIDNCDPDPCHHGQCQDGIDSYTCI-CNPGYMGAICSDQIDECYSSPCLNDGRCIDL 625
Query: 167 DDDQVVCSECPRGYGG 182
+ C+ C G G
Sbjct: 626 VNGYQ-CN-CQPGTSG 639
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI D S C+ C D+ G C+ CA G+ G + + +C PC + G C Q
Sbjct: 532 DIDDCSSTPCLNGAKCIDHPNGYECQ-CATGFTGTLCDENIDNCDPDPC-HHGQC-QDGI 588
Query: 169 DQVVCSECPRGYGG 182
D C C GY G
Sbjct: 589 DSYTCI-CNPGYMG 601
Score = 84 (34.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 24/81 (29%), Positives = 32/81 (39%)
Query: 107 NCNGHADICDAES----GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP 162
+C + D C S G C+ D +C C G+ G + +C PC N G
Sbjct: 983 HCENNIDECTESSCFNGGTCV--DGINSFSC-LCPVGFTGPFCLHDINECSSNPCLNSGT 1039
Query: 163 CVQLDDDQVVCSECPRGYGGE 183
CV D CP GY G+
Sbjct: 1040 CV--DGLGTYRCTCPLGYTGK 1058
Score = 83 (34.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D GG C C G+ G E V +C+ PC N G CV
Sbjct: 471 CLDKIGGFTC-LCMPGFKGVHCELEVNECQSNPCVNNGQCV 510
Score = 79 (32.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C D G C C GY G + V C PC N+G C Q
Sbjct: 1040 CVDGLGTYRCT-CPLGYTGKNCQTLVNLCSPSPCKNKGTCAQ 1080
Score = 69 (29.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G++G E + +C + C N G CV
Sbjct: 964 CSDYVNSYTCT-CPAGFHGVHCENNIDECTESSCFNGGTCV 1003
Score = 63 (27.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/45 (28%), Positives = 18/45 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C+ C + + G + C PC N G C Q D
Sbjct: 198 CLNLPGSYRCQ-CPQRFTGQHCDSPYVPCAPSPCVNGGTCRQTGD 241
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D +C C G+ G + +C PC N G CV
Sbjct: 1002 CVDGINSFSC-LCPVGFTGPFCLHDINECSSNPCLNSGTCV 1041
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C D C C G+ G + + DC PC N C+
Sbjct: 509 CVDKVNRFQC-LCPPGFTGPVCQIDIDDCSSTPCLNGAKCI 548
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 7 CQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ TG E C G+ G+ E + DC C N G CV
Sbjct: 236 CRQ-TGDFTSECHCLPGFEGSNCERNIDDCPNHKCQNGGVCV 276
Score = 61 (26.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTD-C-KQCPCPNQGPCVQLDDD 52
C+ Q G C RCA G+ G + + + C PC N G C L D
Sbjct: 79 CVTQAMLGKATC-RCAPGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSWD 127
Score = 55 (24.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C+ N G C RC G+ G + C++ C N G CV
Sbjct: 41 CVTYHN-GTGYC-RCPEGFLGEYCQHR-DPCEKNRCQNGGTCV 80
Score = 51 (23.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/59 (30%), Positives = 22/59 (37%)
Query: 5 CICQDNTGGDNCERCARGYYGNAL--EGAVTDCK---QCPCPN--QGPCVQLDDDQVSN 56
C+C G +CE N G D QC CP GP Q+D D S+
Sbjct: 480 CLCMPGFKGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSS 538
>UNIPROTKB|F1MSM3 [details] [associations]
symbol:NOTCH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000974 "negative regulation of pro-B cell
differentiation" evidence=IEA] [GO:2000811 "negative regulation of
anoikis" evidence=IEA] [GO:2000737 "negative regulation of stem
cell differentiation" evidence=IEA] [GO:1901201 "regulation of
extracellular matrix assembly" evidence=IEA] [GO:0097150 "neuronal
stem cell maintenance" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072602 "interleukin-4 secretion" evidence=IEA]
[GO:0072144 "glomerular mesangial cell development" evidence=IEA]
[GO:0072044 "collecting duct development" evidence=IEA] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0071372 "cellular
response to follicle-stimulating hormone stimulus" evidence=IEA]
[GO:0070986 "left/right axis specification" evidence=IEA]
[GO:0061419 "positive regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IEA]
[GO:0060982 "coronary artery morphogenesis" evidence=IEA]
[GO:0060979 "vasculogenesis involved in coronary vascular
morphogenesis" evidence=IEA] [GO:0060956 "endocardial cell
differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=IEA] [GO:0060843 "venous
endothelial cell differentiation" evidence=IEA] [GO:0060842
"arterial endothelial cell differentiation" evidence=IEA]
[GO:0060768 "regulation of epithelial cell proliferation involved
in prostate gland development" evidence=IEA] [GO:0060740 "prostate
gland epithelium morphogenesis" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IEA] [GO:0060045 "positive regulation of cardiac muscle
cell proliferation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048715
"negative regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0046427
"positive regulation of JAK-STAT cascade" evidence=IEA] [GO:0045955
"negative regulation of calcium ion-dependent exocytosis"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0045618 "positive
regulation of keratinocyte differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0042640 "anagen" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0032495
"response to muramyl dipeptide" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0031069 "hair follicle
morphogenesis" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0030513 "positive regulation of BMP
signaling pathway" evidence=IEA] [GO:0030335 "positive regulation
of cell migration" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0030279 "negative regulation of ossification"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0014807 "regulation
of somitogenesis" evidence=IEA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=IEA] [GO:0010812 "negative
regulation of cell-substrate adhesion" evidence=IEA] [GO:0010718
"positive regulation of epithelial to mesenchymal transition"
evidence=IEA] [GO:0010001 "glial cell differentiation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0009912
"auditory receptor cell fate commitment" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007440 "foregut
morphogenesis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007386 "compartment pattern specification"
evidence=IEA] [GO:0007221 "positive regulation of transcription of
Notch receptor target" evidence=IEA] [GO:0006959 "humoral immune
response" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004857 "enzyme inhibitor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003344 "pericardium morphogenesis"
evidence=IEA] [GO:0003273 "cell migration involved in endocardial
cushion formation" evidence=IEA] [GO:0003270 "Notch signaling
pathway involved in regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003256 "regulation of
transcription from RNA polymerase II promoter involved in
myocardial precursor cell differentiation" evidence=IEA]
[GO:0003241 "growth involved in heart morphogenesis" evidence=IEA]
[GO:0003222 "ventricular trabecula myocardium morphogenesis"
evidence=IEA] [GO:0003219 "cardiac right ventricle formation"
evidence=IEA] [GO:0003214 "cardiac left ventricle morphogenesis"
evidence=IEA] [GO:0003213 "cardiac right atrium morphogenesis"
evidence=IEA] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IEA]
[GO:0003192 "mitral valve formation" evidence=IEA] [GO:0003184
"pulmonary valve morphogenesis" evidence=IEA] [GO:0003181
"atrioventricular valve morphogenesis" evidence=IEA] [GO:0003180
"aortic valve morphogenesis" evidence=IEA] [GO:0003169 "coronary
vein morphogenesis" evidence=IEA] [GO:0003162 "atrioventricular
node development" evidence=IEA] [GO:0003160 "endocardium
morphogenesis" evidence=IEA] [GO:0002437 "inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002193 "MAML1-RBP-Jkappa-
ICN1 complex" evidence=IEA] [GO:0002040 "sprouting angiogenesis"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0001889
"liver development" evidence=IEA] [GO:0001708 "cell fate
specification" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0001047
"core promoter binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005634 GO:GO:0008284 GO:GO:0004857 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0000122 GO:GO:0072144 GO:GO:0030513
GO:GO:0010718 PROSITE:PS01186 GO:GO:0001047 GO:GO:0046427
PROSITE:PS00010 GO:GO:0003160 GO:GO:0010812 GO:GO:0072044
GO:GO:0072017 GO:GO:0045668 GO:GO:2000811 GO:GO:0010832
GO:GO:0048711 GO:GO:0045662 GO:GO:0048715 GO:GO:0030514
GO:GO:0032495 Pfam:PF12661 GeneTree:ENSGT00700000104305
GO:GO:0097150 GO:GO:0003180 GO:GO:0060253 SUPFAM:SSF90193
GO:GO:2000974 GO:GO:2000737 GO:GO:0061419 GO:GO:0002193
InterPro:IPR024600 Pfam:PF11936 OMA:HGGYNCV EMBL:DAAA02032322
EMBL:DAAA02032323 EMBL:DAAA02032324 EMBL:DAAA02032325
IPI:IPI00703165 Ensembl:ENSBTAT00000017746 Uniprot:F1MSM3
Length = 2534
Score = 147 (56.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/190 (28%), Positives = 71/190 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLD-----DDQVSNLGNRT 61
C D+ G C C +GY G + V C PC N G C Q + + G
Sbjct: 1037 CHDSYGTYTCT-CPQGYTGLNCQTLVRWCDSSPCKNDGRCWQTNALYRCECHSGWTGLYC 1095
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
+ S R +G+ +T H G + G RC C C+ +
Sbjct: 1096 DVPSVSCEVAARQQGVNVT---HLCRNG--GLCMNAGNTHRC-HCQAGYTGSYCEEQVDE 1149
Query: 122 C---------ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVV 172
C C D GG +CE C GY+G V +C PC N G C+ L +
Sbjct: 1150 CSPSPCQNGATCTDYPGGYSCE-CVAGYHGVNCSEEVNECLSQPCRNGGTCIDLTNTYK- 1207
Query: 173 CSECPRGYGG 182
CS CPRG G
Sbjct: 1208 CS-CPRGTQG 1216
Score = 145 (56.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 49/185 (26%), Positives = 68/185 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D T G C C G+ G + + +C PC NQG C+ D V+ G + +
Sbjct: 769 CKDMTSGYVCA-CREGFSGPNCQTNINECASNPCLNQGTCI----DDVA--GYKCNCLLP 821
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + G E +FS P G C+ + C+
Sbjct: 822 YT-GATCEVVLAPCAPGPCRNGGECRESEDYESFSCACPAGWQGQT--CEIDINECVKSP 878
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ G C C GY G E + DC+ PC N G C D +C
Sbjct: 879 CRAGASCQNTNGSYRCH-CQAGYTGRNCETDIDDCRPNPCHNGGSCT--DGINTAFCDCL 935
Query: 178 RGYGG 182
G+ G
Sbjct: 936 PGFQG 940
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 48/185 (25%), Positives = 66/185 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV-----SNLGNRT 61
C+D C C GY G+ E + +C PC + G C D+ + G
Sbjct: 581 CKDGVATFTC-LCQPGYTGHHCESNINECHSQPCRHGGTCQDRDNAYLCFCLKGTTGPNC 639
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
I + G L + Y+ EP G+ CN N D C A+S
Sbjct: 640 EINLDDCASNPCDSGTCLDKIDGYECAC---EPGYTGSM-----CNIN--IDEC-ADSP- 687
Query: 122 C----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
C C+D G C RC GY+ V +C PC + G C D +C
Sbjct: 688 CHNGGTCEDGINGFTC-RCPEGYHDPTCLSEVNECSSNPCIH-GAC--RDSLNGYKCDCD 743
Query: 178 RGYGG 182
G+ G
Sbjct: 744 PGWSG 748
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 55/188 (29%), Positives = 79/188 (42%)
Query: 5 CICQDNTGGDNCER----CARG--YYGNALEGAVTDCKQCPCPN--QGPCVQLDDDQVSN 56
C+C + G++C CA + G V C CP+ G L+D +SN
Sbjct: 322 CVCVNGWTGEDCSENIDDCASASCFQGATCHDRVASF-YCECPHGRTGLLCHLNDACISN 380
Query: 57 LGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICD 116
N S N G A+ +GY +G A S+ V C+ A+ C+
Sbjct: 381 PCNEG-----SNCDTNPVNGKAICTCP----SGY-----TGPACSQDVD-ECSLGANPCE 425
Query: 117 AESGRCICQDNT-GGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVVCS 174
+G+CI NT G C+ C +GY G E V +C PC N C+ Q+ + Q +C
Sbjct: 426 -HAGKCI---NTLGSFECQ-CLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICM 480
Query: 175 ECPRGYGG 182
P GY G
Sbjct: 481 --P-GYEG 485
Score = 94 (38.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 124 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVVCSECPRGYG 181
C D GG +C C G+ G EG V +C PC +G CVQ + C EC G+
Sbjct: 1245 CVDQVGGYSCS-CPPGFVGERCEGDVNECLSNPCDARGTQNCVQ-HVNAFHC-ECRAGHT 1301
Query: 182 GEK 184
G +
Sbjct: 1302 GRR 1304
Score = 76 (31.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/140 (26%), Positives = 50/140 (35%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD-----QVSNLGNRT 61
CQD C C +G G E + DC PC + G C+ D + G+
Sbjct: 619 CQDRDNAYLCF-CLKGTTGPNCEINLDDCASNPC-DSGTCLDKIDGYECACEPGYTGSMC 676
Query: 62 RIRIKSAL------GGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADIC 115
I I GG G+ T GYH +PT + C C H
Sbjct: 677 NINIDECADSPCHNGGTCEDGI--NGFTCRCPEGYH-DPTCLSEVNECSSNPCI-HGACR 732
Query: 116 DAESG-RCICQDNTGGDNCE 134
D+ +G +C C G NC+
Sbjct: 733 DSLNGYKCDCDPGWSGANCD 752
Score = 70 (29.7 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
+C N G + C GY G+ E V +C PC N C
Sbjct: 1122 LCM-NAGNTHRCHCQAGYTGSYCEEQVDECSPSPCQNGATC 1161
>ZFIN|ZDB-GENE-070112-1202 [details] [associations]
symbol:zgc:158328 "zgc:158328" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-070112-1202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 Pfam:PF12661
HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:BC129204
IPI:IPI00829071 RefSeq:NP_001073658.1 UniGene:Dr.95104
ProteinModelPortal:A1L1T4 STRING:A1L1T4 GeneID:567225
KEGG:dre:567225 InParanoid:A1L1T4 NextBio:20888577 Uniprot:A1L1T4
Length = 1339
Score = 144 (55.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 61/210 (29%), Positives = 85/210 (40%)
Query: 4 RCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPN-QGPCVQLDDDQVSNLGNR 60
RC+C+ G +C++ C+ G YG + V +C+ C + G C +G+
Sbjct: 788 RCVCESGYTGQHCDKKCSEGLYGADCK-QVCECENGAECDHVSGACTCA----AGWVGSH 842
Query: 61 TRIRIKSALGGNRTRGLALTR---QTHYQLTGYHHEPTSGGAFSRCV-PC-------NCN 109
R G + R Q H+ +TG T G A C+ C NC+
Sbjct: 843 CEKRCPVGFYGQDCAQMCQCRNEAQCHH-ITGACR-CTPGWAPPHCILACPAGTFGLNCS 900
Query: 110 GHADI-----CDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGP 162
D CD SG+C C GD C++ CA G++G +C+Q C CP
Sbjct: 901 QSCDCHNGGSCDPVSGQCSCAPGWTGDRCQQTCASGWFGK-------NCEQKCICPVGVA 953
Query: 163 CVQLDDDQVV--CSECPRGYGG---EKMSP 187
C D V C CP GY G EKM P
Sbjct: 954 C-----DHVTGRCG-CPAGYTGNSCEKMCP 977
Score = 133 (51.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 54/179 (30%), Positives = 65/179 (36%)
Query: 4 RCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPC-PNQGPC------VQLDDDQVS 55
RC C T G +CE+ C RG YG T C P G C ++V
Sbjct: 1090 RCNCAPGTTGLSCEQMCPRGRYGVQCRSFCTCANGGVCDPVNGTCRCGLGWTGQHCEKVC 1149
Query: 56 NLGNR-TRIRIKSALGGNRT----RGLALTRQTHYQLTGYHHEPTSGGAFSR-CV-PCNC 108
G+ K N T G +Y H P G F C PC C
Sbjct: 1150 VSGHYGVNCEQKCVCQNNGTCDRFTGCCSCPSGYYGPACQHRCPA--GFFGELCAQPCVC 1207
Query: 109 N-GHADICDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQCPC-PNQGPCV 164
GH CD +G+C C G+ CE RC G +G G V DC C P G C+
Sbjct: 1208 KQGHQ--CDHVTGKCECPPGYHGNQCEKRCESGRFGRDCAG-VCDCDGASCDPTTGQCL 1263
Score = 131 (51.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 31/87 (35%), Positives = 42/87 (48%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPC 163
C C +A C++ SGRC+C+ G +C++ C+ G YG DCKQ C C N C
Sbjct: 773 CQCASNAVSCESSSGRCVCESGYTGQHCDKKCSEGLYG-------ADCKQVCECENGAEC 825
Query: 164 VQLDDDQVVCSECPRGYGG---EKMSP 187
D C+ C G+ G EK P
Sbjct: 826 ---DHVSGACT-CAAGWVGSHCEKRCP 848
Score = 128 (50.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 89 GYH----HEPTSGGAFSR-CVP-CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYY 141
GYH + G F R C C+C+G + CD +G+C+C G+ CE+ C YY
Sbjct: 1225 GYHGNQCEKRCESGRFGRDCAGVCDCDGAS--CDPTTGQCLCPPGKTGERCEKVCDSRYY 1282
Query: 142 GNALEGAVTDCK-QCPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPGA 189
G DC QC C + G C D CS CP+ + G GA
Sbjct: 1283 G-------PDCSFQCECVHGGQC---DPQTGHCS-CPQTWLGPTCEHGA 1320
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 59/197 (29%), Positives = 75/197 (38%)
Query: 5 CICQDNTGGDNCE-RCARGYYGNALEGAVTDC-KQCPC-PNQGPC------VQLDDDQVS 55
CICQ G NC C G+YG V C ++ C P G C L +Q+
Sbjct: 1048 CICQPGYFGPNCSISCPSGHYGRDC-AQVCSCGEKGQCHPETGRCNCAPGTTGLSCEQMC 1106
Query: 56 NLGNRTRIRIKS---ALGGNRTRGLALTRQTHYQLTGYHHEPT--SGGAFSRCVP-CNCN 109
G R ++ +S G + T + TG H E SG C C C
Sbjct: 1107 PRG-RYGVQCRSFCTCANGGVCDPVNGTCRCGLGWTGQHCEKVCVSGHYGVNCEQKCVCQ 1165
Query: 110 GHADICDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQ-CPCPNQGPCVQLD 167
+ CD +G C C G C+ RC G++G C Q C C QG Q D
Sbjct: 1166 NNGT-CDRFTGCCSCPSGYYGPACQHRCPAGFFGEL-------CAQPCVC-KQGH--QCD 1214
Query: 168 DDQVVCSECPRGYGGEK 184
C ECP GY G +
Sbjct: 1215 HVTGKC-ECPPGYHGNQ 1230
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 57/201 (28%), Positives = 75/201 (37%)
Query: 4 RCICQDNTGGDNC-ERCARGYYG---NAL----EGAVTD--CKQCPCPNQGPCVQLDDDQ 53
RC+C G C + C G YG N+L G D +C CP + ++
Sbjct: 568 RCVCPPGWTGLICNDTCPEGTYGAECNSLCVCKNGGRCDPVTGKCLCPPGVHGLHCENGC 627
Query: 54 VSNL-GNRTRIRIKSALGGN--RTRGLALTRQTHYQLTGYHHEPT---SGGAFSRCVPCN 107
G R R G+ R G L Y + H P S GA C
Sbjct: 628 PQGFYGRLCRRRCNCPNNGHCHRLYGGCLCTPGLYGK--FCHLPCPKWSHGA-GCSEECE 684
Query: 108 CNGHADI-CDAESGRCICQDNTGGDNCER-CARGYYGNALEGAV--TDCKQCPCPNQGPC 163
C + CD + G C+C+ GD C+ C GY+G G +D K C P G C
Sbjct: 685 CVQENSLSCDPQMGTCLCKPGYHGDRCQTDCDDGYFGVGCHGLCNCSDGKSCD-PKTGEC 743
Query: 164 VQLDDDQVVCSECPRGYGGEK 184
++ CP GY GEK
Sbjct: 744 QRM---------CPAGYHGEK 755
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 58/202 (28%), Positives = 78/202 (38%)
Query: 4 RCICQDNTGGDNCER-CARGYYG-NALEGAVTDCK--QCPCPN-QGPCVQLDDDQVSNLG 58
RC C G++CE+ C +G +G N V C Q C + G C Q G
Sbjct: 960 RCGCPAGYTGNSCEKMCPQGRFGLNC--SRVCSCSGDQYRCHHITGRC----SCQPGYNG 1013
Query: 59 NRTRIRIKSALGG---NRTRGLALTRQTHYQ------LTGYHHEPTS----GGAFSR-CV 104
NR +R + G + A + ++ GY S G + R C
Sbjct: 1014 NRCLLRCREGTYGPYCKKRCSCANGGRCDFRNGSCICQPGYFGPNCSISCPSGHYGRDCA 1073
Query: 105 P-CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQG 161
C+C G C E+GRC C T G +CE+ C RG YG C+ C C N G
Sbjct: 1074 QVCSC-GEKGQCHPETGRCNCAPGTTGLSCEQMCPRGRYG-------VQCRSFCTCANGG 1125
Query: 162 PCVQLDDDQVVCSECPRGYGGE 183
C D C C G+ G+
Sbjct: 1126 VC---DPVNGTC-RCGLGWTGQ 1143
Score = 45 (20.9 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C D +N E C + N G C+ PN C +D+
Sbjct: 380 CIDTDECENGEACCSHFCKNYPGGYECGCRPGYTPNGCTCDDIDE 424
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 41
+ +C+ GD+C + A D +C CP
Sbjct: 537 KSMCETGVFGDDCSVSCEDCVNGGVCAAEKD--RCVCP 572
>RGD|2067 [details] [associations]
symbol:Agrn "agrin" species:10116 "Rattus norvegicus" [GO:0001932
"regulation of protein phosphorylation" evidence=IDA] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISO]
[GO:0002162 "dystroglycan binding" evidence=IDA] [GO:0005509 "calcium
ion binding" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=ISO;ISS] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=ISO;TAS] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0010469
"regulation of receptor activity" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030548 "acetylcholine receptor regulator activity" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0032314
"regulation of Rac GTPase activity" evidence=ISO] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IDA]
[GO:0033691 "sialic acid binding" evidence=ISS] [GO:0035374
"chondroitin sulfate binding" evidence=ISS] [GO:0043113 "receptor
clustering" evidence=ISO;ISS;IDA] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=ISS] [GO:0043525 "positive regulation
of neuron apoptotic process" evidence=ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=ISO] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IDA] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=ISO] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050 Pfam:PF07648
PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181 SMART:SM00280 RGD:2067
GO:GO:0005615 GO:GO:0009986 GO:GO:0043525 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0045202 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
GO:GO:0005605 GO:GO:0043113 PROSITE:PS01186 GO:GO:0033691
GO:GO:0002162 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 GO:GO:0030548 GO:GO:0035374
GO:GO:0043395 GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 EMBL:M64780
EMBL:S44194 IPI:IPI00188885 IPI:IPI00231249 IPI:IPI00231250
IPI:IPI00231251 IPI:IPI00231252 PIR:JH0399 RefSeq:NP_786930.1
UniGene:Rn.2163 PDB:3V64 PDB:3V65 PDBsum:3V64 PDBsum:3V65
ProteinModelPortal:P25304 SMR:P25304 IntAct:P25304 STRING:P25304
PRIDE:P25304 GeneID:25592 KEGG:rno:25592 InParanoid:P25304
NextBio:607271 ArrayExpress:P25304 Genevestigator:P25304
GermOnline:ENSRNOG00000020205 GO:GO:0001932 Uniprot:P25304
Length = 1959
Score = 137 (53.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 82 QTHYQLTGYHHEPTSGGAFSRCVP-CNCNGHADI---CDAESGRCICQDNTGGDNCERCA 137
QT Y + G + C C+CN H CD +G+C C+ GG C+RC
Sbjct: 663 QTPYGCCQDNFTAAQGVGLAGCPSTCHCNPHGSYSGTCDPATGQCSCRPGVGGLRCDRCE 722
Query: 138 RGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDDQV--VCSECPRGYGGEK 184
G++ G VTD C C C +G V+ D +Q+ +CS C G G K
Sbjct: 723 PGFWN--FRGIVTDGHSGCTPCSCDPRG-AVRDDCEQMTGLCS-CRPGVAGPK 771
Score = 48 (22.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 5 CICQDNTGGDNCER--CAR-GY-YGNALEGAVTDCKQ---CPCPNQGPCVQ 48
C C D D R CA+ G+ Y N +C+Q P +QGPC Q
Sbjct: 309 CSC-DRVTCDGSYRPVCAQDGHTYNNDCWRQQAECRQQRAIPPKHQGPCDQ 358
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 30 GAVTDCKQCPCP 41
GAV QC CP
Sbjct: 505 GAVCSAGQCVCP 516
Score = 36 (17.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 36 KQCPCPNQGPCVQL 49
+Q PC ++ PC +
Sbjct: 133 RQGPCGSRDPCANV 146
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 128 (50.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 31/83 (37%), Positives = 40/83 (48%)
Query: 103 CVPCNCNGHADICDA--ESGRCICQDNTGGDNCERCA-RGYYGNALEGAVTDCKQCPCPN 159
C+ CNCN + D E+G C C++ G C+ C Y+ V D Q C N
Sbjct: 408 CIECNCNQIGSVHDRCNETGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDDDQLLCQN 467
Query: 160 QGPCVQLDDDQVVCSECPRGYGG 182
G CVQ +Q C+ CPRGY G
Sbjct: 468 GGTCVQ---NQR-CT-CPRGYTG 485
Score = 107 (42.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 27/87 (31%), Positives = 37/87 (42%)
Query: 106 CNCNGHADICD----AESGRCI-CQDNTGGDNCERCARGYYGNALEGAVTD---CKQCPC 157
C C GH++ C C+ C+ NT G +C+ C GYY N + D C +C C
Sbjct: 355 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNG-SAELDDENVCIECNC 413
Query: 158 PNQGPCVQLDDDQVVCSECPRGYGGEK 184
G ++ C EC G G K
Sbjct: 414 NQIGSVHDRCNETGFC-ECREGAAGPK 439
Score = 55 (24.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 4 RCICQDNTGGDNCERCARGY 23
+C C NT G +C +C R +
Sbjct: 241 QCECDHNTTGPDCGKCKRSF 260
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 149 (57.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 56/184 (30%), Positives = 76/184 (41%)
Query: 7 CQDNTGGDNCERCARGYYGNALE--GAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIR 64
CQ NT G NCE C +Y A A+ CK C C G + N+G +
Sbjct: 607 CQHNTTGRNCELCKDFHYRQAGADLSAIDVCKPCDCYATG--TKNKSLLCDNIGGQCNC- 663
Query: 65 IKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--G--HADI-CDAES 119
K + G RQ + G+++ S C PCNCN G + DI C S
Sbjct: 664 -KRHVSG---------RQCNQCQEGFYNLQQSNP--DGCSPCNCNTSGTVNGDITCHQNS 711
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDD---QVVCSE 175
G+C C+ N G C+ C G+ AL + D C+ C C + G Q + Q C E
Sbjct: 712 GQCKCKANVIGPRCDSCNFGF--KALRYSNEDGCEPCWCNSHGSVNQFCNPLTGQCNCKE 769
Query: 176 CPRG 179
+G
Sbjct: 770 QVKG 773
Score = 148 (57.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/194 (25%), Positives = 79/194 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G C +C Y ++ + C++C C +G D VS G +
Sbjct: 866 QCPCKAGVIGLQCNQCMLHTYNLSMRNLL-GCQRCDCDAKGTLAGTVCDHVS--GQCVCL 922
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN--GHAD-ICDAESG 120
+ N + G++ P+S + C+PC C+ G + +CD +G
Sbjct: 923 PHRQGRRCNECK------------PGFYFSPSS---VTGCLPCLCHTAGSVNQVCDKLTG 967
Query: 121 RCICQD-NTGGDNCERCARGYYGNALEGAVTDCKQCPC-PN---QGPCVQLDDDQVVCSE 175
+CICQD + G CERC ++G + C+ C C P G C L Q VC +
Sbjct: 968 QCICQDVSVTGRTCERCKEHHFG--FDSVTGRCQHCNCHPAGAISGTC-HLVTGQCVCKQ 1024
Query: 176 CPRGYGGEKMSPGA 189
G + P A
Sbjct: 1025 FVTGLKCDNCVPNA 1038
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/172 (26%), Positives = 63/172 (36%)
Query: 4 RCIC--QDNTGGDNCERCARGYYGNALEGA----VTDCKQCPCPNQG-PC-VQLDDDQVS 55
RC+C + T G C+RC Y +CK C C + C L+ D
Sbjct: 534 RCLCIKESYTEGIQCDRCLPLYNDKPFRPGDQVHAYNCKPCQCYSHAVSCHYDLEMDPFP 593
Query: 56 NLGNRTRIRIKSALGGNRT-RGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC--NGHA 112
R + N T R L + HY+ G A C PC+C G
Sbjct: 594 QEYYRGSGGVCDNCQHNTTGRNCELCKDFHYRQAG-----ADLSAIDVCKPCDCYATGTK 648
Query: 113 D---ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
+ +CD G+C C+ + G C +C G+Y N + C C C G
Sbjct: 649 NKSLLCDNIGGQCNCKRHVSGRQCNQCQEGFY-NLQQSNPDGCSPCNCNTSG 699
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 45/177 (25%), Positives = 68/177 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ N GG C C GY+ + + C C C G S L +++
Sbjct: 813 QCACKPNIGGRQCNECLDGYHRIQVNHSFV-CLPCDCDKAGTV------NGSLLCDKSTG 865
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH--ADICDAESGR 121
+ G GL + L Y+ + RC C+ G +CD SG+
Sbjct: 866 QCPCKAG---VIGLQCNQ---CMLHTYNLSMRNLLGCQRC-DCDAKGTLAGTVCDHVSGQ 918
Query: 122 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD---QVVCSE 175
C+C + G C C G+Y + +VT C C C G Q+ D Q +C +
Sbjct: 919 CVCLPHRQGRRCNECKPGFYFSP--SSVTGCLPCLCHTAGSVNQVCDKLTGQCICQD 973
Score = 115 (45.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 103 CVPCNCN--GH--ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCP 158
C C CN G +CDA +G+C C+ N GG C C GY+ + + C C C
Sbjct: 791 CKACECNIAGSFAGTVCDARTGQCACKPNIGGRQCNECLDGYHRIQVNHSFV-CLPCDCD 849
Query: 159 NQG 161
G
Sbjct: 850 KAG 852
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
+C C++ G C+ C +YG L+ VT CK C C
Sbjct: 764 QCNCKEQVKGLLCDTCVDNFYG--LD--VTGCKACEC 796
Score = 61 (26.5 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQG 44
+C C+ N G C+ C G+ AL + D C+ C C + G
Sbjct: 713 QCKCKANVIGPRCDSCNFGF--KALRYSNEDGCEPCWCNSHG 752
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 148 (57.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/189 (26%), Positives = 76/189 (40%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C C+ G C +C G+Y L+ D C+ C C P +D D ++ N +
Sbjct: 658 QCDCKRRVSGRQCLQCQDGFYD--LQALDPDGCRPCNC---NPSGTVDGD-ITCHQNSGQ 711
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAES 119
K+ + G R + ++ G+ + G C PC CN H + CD S
Sbjct: 712 CSCKANVIGLRCN------RCNF---GFKFLQSFNG--DGCEPCQCNLHGSVNQLCDPLS 760
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG--PCVQLDDDQVVCSECP 177
G+C C+ G C+ C +YG L + C+ C C G P D + C C
Sbjct: 761 GQCACKKEAKGLKCDSCRENFYG--LPWSA--CEVCDCSKAGSQPGTVCDTETGQCV-CK 815
Query: 178 RGYGGEKMS 186
GG + S
Sbjct: 816 PNVGGRQCS 824
Score = 142 (55.0 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 42/162 (25%), Positives = 64/162 (39%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C+ N GG C +C GY+ N + C C C G N G+ +
Sbjct: 811 QCVCKPNVGGRQCSQCKAGYF-NLYQNDSHLCLTCNCEKMGTV---------N-GS---L 856
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNG----HADICDAES 119
R + G + L +T +Q + T C C+C+ +CD S
Sbjct: 857 RCDKSTGQCPCK-LGVTGLRCHQCKPHRFNLTMDNP-QGCQACDCDSLGTLPGSMCDPIS 914
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG 161
G+C+C + G CE+C G+Y + T C C C G
Sbjct: 915 GQCLCLPHRQGRRCEQCQPGFYSSPSNA--TGCLPCLCHTAG 954
Score = 134 (52.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 39/140 (27%), Positives = 63/140 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C+C + G CE+C G+Y + T C C C G VS++ N +
Sbjct: 916 QCLCLPHRQGRRCEQCQPGFYSSPSNA--TGCLPCLCHTAGA--------VSHICNS--V 963
Query: 64 RIKSALGGNRTRGLALTRQTHY-QLTGYHHEPTSGGAFSRCVPCNCN--GHAD-ICDAES 119
+ + T G R H Q + + +P +G RC PC+C+ G ++ CDA +
Sbjct: 964 TGQCSCHDPSTTG----RSCHQCQESYFRFDPLTG----RCRPCHCHVAGASNGTCDAVT 1015
Query: 120 GRCICQDNTGGDNCERCARG 139
G+C C++ G C+ C G
Sbjct: 1016 GQCFCKEFVTGSKCDTCVPG 1035
Score = 127 (49.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 97 GGAFSRCVPCNCN--GH--ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDC 152
G +S C C+C+ G +CD E+G+C+C+ N GG C +C GY+ N + C
Sbjct: 783 GLPWSACEVCDCSKAGSQPGTVCDTETGQCVCKPNVGGRQCSQCKAGYF-NLYQNDSHLC 841
Query: 153 KQCPCPNQG 161
C C G
Sbjct: 842 LTCNCEKMG 850
Score = 39 (18.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 12/51 (23%), Positives = 18/51 (35%)
Query: 135 RCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEKM 185
+C G+Y L G + C CP V + C P G ++
Sbjct: 3226 QCCSGHYARILPGEI--C--CPDERHNR-VSVGFGDACCGTMPYATSGSQV 3271
>ZFIN|ZDB-GENE-060503-252 [details] [associations]
symbol:megf11 "multiple EGF-like-domains 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007527
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS50966 PROSITE:PS51041
SMART:SM00181 ZFIN:ZDB-GENE-060503-252 GO:GO:0008270
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:BX890618
EMBL:BX908395 EMBL:CR788229 IPI:IPI00785724
Ensembl:ENSDART00000090855 Uniprot:F1Q4V3
Length = 1114
Score = 141 (54.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 59/203 (29%), Positives = 84/203 (41%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDC-KQCPC-PNQGPCVQLDDDQVSNLGNRT 61
CIC GD+C + C G +G ++ C Q C P G C+ + Q G
Sbjct: 428 CICAPGYTGDDCSQTCPSGLFGTNCT-SICHCHNQASCSPIDGSCICKEGWQ----GVDC 482
Query: 62 RIRIKSA---LGGNRT----RGLALTR--QTHYQLTGYHHE----PTSGGAFS-RCVP-C 106
I S LG N+T G A + +G+ E P G + C C
Sbjct: 483 SILCSSGTWGLGCNQTCLCANGAACDPIDGSCTCSSGWRGERCQQPCPDGTYELECRERC 542
Query: 107 NCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPCV 164
+CN HAD CD SG C C G +C+ C +G++G+ +C C C N G C
Sbjct: 543 DCN-HADGCDHVSGLCRCLPGWTGIHCDSICPQGFWGS-------NCSMTCSCQNGGSCS 594
Query: 165 QLDDDQVVCSECPRGYGGEKMSP 187
+D VC+ RG +++ P
Sbjct: 595 P-EDGTCVCAPGYRGTSCKRICP 616
Score = 122 (48.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 33/93 (35%), Positives = 43/93 (46%)
Query: 88 TG-YHHEPTSGGAFSR-C-VPCNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGN 143
TG Y +E G + C VPC C AD C + +G CIC GD+C + C G +G
Sbjct: 392 TGLYCNETCPPGYYGEGCGVPCQCANGAD-CHSLTGACICAPGYTGDDCSQTCPSGLFG- 449
Query: 144 ALEGAVTDCKQ-CPCPNQGPCVQLDDDQVVCSE 175
T+C C C NQ C +D +C E
Sbjct: 450 ------TNCTSICHCHNQASCSPIDGS-CICKE 475
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 30/79 (37%), Positives = 37/79 (46%)
Query: 106 CNC-NGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
C C NG C E+G CIC G C ERC G +G E ++CPC N G C
Sbjct: 195 CQCLNGAT--CHHETGECICAPGYMGPICGERCPSGSHGPQCE------QRCPCQNGGTC 246
Query: 164 VQLDDDQVVCSECPRGYGG 182
+ + CS CP G+ G
Sbjct: 247 HHITGE---CS-CPAGWTG 261
>RGD|620761 [details] [associations]
symbol:Notch3 "notch 3" species:10116 "Rattus norvegicus"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007219 "Notch signaling pathway"
evidence=IEA;ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA;TAS] [GO:0030900
"forebrain development" evidence=ISO] [GO:0042246 "tissue
regeneration" evidence=IEP] [GO:0045596 "negative regulation of
cell differentiation" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=ISO] [GO:0048663 "neuron fate commitment" evidence=ISO]
[GO:0050793 "regulation of developmental process" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000742 InterPro:IPR000800
InterPro:IPR001881 InterPro:IPR008297 InterPro:IPR010660
InterPro:IPR011656 InterPro:IPR018097 InterPro:IPR022331
Pfam:PF00008 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PRINTS:PR01986 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004
SMART:SM00179 SMART:SM00181 SMART:SM00248 InterPro:IPR000152
RGD:620761 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0048661
GO:GO:0030900 GO:GO:0045665 GO:GO:0007219 GO:GO:0005509
GO:GO:0006351 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0042246 PROSITE:PS00010 GO:GO:0048663 GO:GO:0072104
Pfam:PF12661 SUPFAM:SSF90193 HOGENOM:HOG000234369
HOVERGEN:HBG052650 KO:K02599 InterPro:IPR024600 Pfam:PF11936
CTD:4854 OrthoDB:EOG4C2H8K EMBL:AF164486 IPI:IPI00206814
RefSeq:NP_064472.2 UniGene:Rn.228683 ProteinModelPortal:Q9R172
SMR:Q9R172 STRING:Q9R172 PRIDE:Q9R172 GeneID:56761 KEGG:rno:56761
UCSC:RGD:620761 InParanoid:Q9R172 NextBio:611142
ArrayExpress:Q9R172 Genevestigator:Q9R172
GermOnline:ENSRNOG00000004346 Uniprot:Q9R172
Length = 2319
Score = 137 (53.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 56/186 (30%), Positives = 71/186 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+ NT G +C RGY G E V +C PC NQ C LD +G T I
Sbjct: 409 RCV---NTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATC--LD-----RIGQFTCI 458
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA---DICDAESG 120
+ G + + + G + +G FS P +G D+ + S
Sbjct: 459 CMAGFTGTFCEVDIDECQSSPCVNGGVCKDRVNG--FSCTCPSGFSGSTCQLDVDECAST 516
Query: 121 RCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
C C D G C RCA G+ G E V DC PC + G CV D C
Sbjct: 517 PCRNGAKCVDQPDGYEC-RCAEGFEGTLCERNVDDCSPDPC-HHGRCV--DGIASFSCAC 572
Query: 177 PRGYGG 182
GY G
Sbjct: 573 APGYTG 578
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 50/194 (25%), Positives = 71/194 (36%)
Query: 6 ICQDN--TGGDNCERCARGYYGNALEGAVTDCK--QCPCPNQGPCVQLDDDQVSNLGN-- 59
IC N +G C C G+ G A + V +C PC + G CV + G
Sbjct: 367 ICDTNPVSGRAICT-CPPGFTGGACDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGY 425
Query: 60 ---RTRIRIKSALGGN-RTRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCVPCNCNGHA 112
R + L G R + L R + + G+ G F C
Sbjct: 426 TGPRCETDVNECLSGPCRNQATCLDRIGQFTCICMAGFT------GTF-------CE--V 470
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI + +S C+ C+D G +C C G+ G+ + V +C PC N CV
Sbjct: 471 DIDECQSSPCVNGGVCKDRVNGFSCT-CPSGFSGSTCQLDVDECASTPCRNGAKCVD-QP 528
Query: 169 DQVVCSECPRGYGG 182
D C C G+ G
Sbjct: 529 DGYEC-RCAEGFEG 541
Score = 116 (45.9 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 45/166 (27%), Positives = 63/166 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+ GG CE C GY G++ E V +C PC N G C+ L + + T +
Sbjct: 1101 CRGYMGGYVCE-CPTGYSGDSCEDDVDECASQPCQNGGSCIDLVAHYLCSCPPGTLGVLC 1159
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH--ADICDAESGRCI- 123
+ G +L G + GG C P H ADI + G C
Sbjct: 1160 EINEDDCGPGPSLDSGLRCLHNGTCVDLV-GGFRCNCPPGYTGLHCEADINECRPGTCHA 1218
Query: 124 -----CQDNTGGD-NCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
C + GG C C G+ G + A+ C+ PC + G C
Sbjct: 1219 AHTRDCLQDPGGHFRCI-CLPGFTGPRCQTALFPCESQPCQHGGQC 1263
Score = 111 (44.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 107 NCNGHADICDAESGRC--ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
+C D C A+ + C+ GG CE C GY G++ E V +C PC N G C+
Sbjct: 1082 HCEQEVDPCTAQPCQHGGTCRGYMGGYVCE-CPTGYSGDSCEDDVDECASQPCQNGGSCI 1140
Query: 165 QLDDDQVVCSECPRG 179
L +CS CP G
Sbjct: 1141 DLVA-HYLCS-CPPG 1153
Score = 107 (42.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/78 (34%), Positives = 36/78 (46%)
Query: 108 CNGHADICDAES---GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C + D C + GRC+ D +C CA GY G E V +C+ PC G C+
Sbjct: 544 CERNVDDCSPDPCHHGRCV--DGIASFSCA-CAPGYTGIRCESQVDECRSQPCRYGGKCL 600
Query: 165 QLDDDQVVCSECPRGYGG 182
L D + +C CP G G
Sbjct: 601 DLVD-KYLC-RCPPGTTG 616
Score = 92 (37.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
IC G C C G+ GN + V C Q PC N G CVQ
Sbjct: 978 ICNPTHSGFECT-CREGFTGNQCQNPVDWCSQAPCQNGGRCVQ 1019
Score = 91 (37.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 25/70 (35%), Positives = 33/70 (47%)
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+C A G+CI +D++ C C G G+ E V C PC + G C V C
Sbjct: 1056 LCQA-GGQCIDKDHS--HYCV-CPEGRMGSHCEQEVDPCTAQPCQHGGTCRGYMGGYV-C 1110
Query: 174 SECPRGYGGE 183
ECP GY G+
Sbjct: 1111 -ECPTGYSGD 1119
Score = 65 (27.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
+C+D +C C G+ G + +C PC G CV
Sbjct: 635 VCRDGINRYDCV-CQPGFTGPLCNVEINECASSPCGEGGSCV 675
Score = 57 (25.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ICQDNTGGDNCERCARGYYG-NALEGAVTD-CKQCPCPNQGPC 46
+C D GG C C G+ G + D C+ PC G C
Sbjct: 710 VCHDAPGGFQCV-CDPGWSGPRCSQSLAPDACESQPCQAGGTC 751
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG +C C G+ G + + DC C + C
Sbjct: 293 CFNLLGGHSCV-CVNGWTGESCSQNIDDCATAVCFHGATC 331
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 19 CARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C G+ G E V DC C N G CV
Sbjct: 226 CLPGFEGQNCEVNVDDCPGHRCLNGGTCV 254
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 17/56 (30%), Positives = 19/56 (33%)
Query: 5 CICQDNTGGDNCE---RCARGY--YGNALEGAVTDCKQCPCPN--QGPCVQLDDDQ 53
C C G CE C +G E C CP QGP Q D D+
Sbjct: 760 CTCAPGFQGHQCEVLSPCTPSLCEHGGHCESDPDQLTVCSCPPGWQGPRCQQDVDE 815
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
CP P V L V + PR +GG SPG
Sbjct: 2090 CPGPLADSSVTLSP--VDSLDSPRPFGGPPASPG 2121
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 5 CICQDNTGGDNCE 17
C C T G NCE
Sbjct: 608 CRCPPGTTGVNCE 620
>UNIPROTKB|Q9R172 [details] [associations]
symbol:Notch3 "Neurogenic locus notch homolog protein 3"
species:10116 "Rattus norvegicus" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0050793 "regulation of developmental process"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022331 Pfam:PF00008 Pfam:PF00066 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01986 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 RGD:620761 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0048661 GO:GO:0030900
GO:GO:0045665 GO:GO:0007219 GO:GO:0005509 GO:GO:0006351
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 GO:GO:0042246
PROSITE:PS00010 GO:GO:0048663 GO:GO:0072104 Pfam:PF12661
SUPFAM:SSF90193 HOGENOM:HOG000234369 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4854 OrthoDB:EOG4C2H8K
EMBL:AF164486 IPI:IPI00206814 RefSeq:NP_064472.2 UniGene:Rn.228683
ProteinModelPortal:Q9R172 SMR:Q9R172 STRING:Q9R172 PRIDE:Q9R172
GeneID:56761 KEGG:rno:56761 UCSC:RGD:620761 InParanoid:Q9R172
NextBio:611142 ArrayExpress:Q9R172 Genevestigator:Q9R172
GermOnline:ENSRNOG00000004346 Uniprot:Q9R172
Length = 2319
Score = 137 (53.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 56/186 (30%), Positives = 71/186 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
RC+ NT G +C RGY G E V +C PC NQ C LD +G T I
Sbjct: 409 RCV---NTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATC--LD-----RIGQFTCI 458
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA---DICDAESG 120
+ G + + + G + +G FS P +G D+ + S
Sbjct: 459 CMAGFTGTFCEVDIDECQSSPCVNGGVCKDRVNG--FSCTCPSGFSGSTCQLDVDECAST 516
Query: 121 RCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
C C D G C RCA G+ G E V DC PC + G CV D C
Sbjct: 517 PCRNGAKCVDQPDGYEC-RCAEGFEGTLCERNVDDCSPDPC-HHGRCV--DGIASFSCAC 572
Query: 177 PRGYGG 182
GY G
Sbjct: 573 APGYTG 578
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 50/194 (25%), Positives = 71/194 (36%)
Query: 6 ICQDN--TGGDNCERCARGYYGNALEGAVTDCK--QCPCPNQGPCVQLDDDQVSNLGN-- 59
IC N +G C C G+ G A + V +C PC + G CV + G
Sbjct: 367 ICDTNPVSGRAICT-CPPGFTGGACDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGY 425
Query: 60 ---RTRIRIKSALGGN-RTRGLALTRQTHYQ---LTGYHHEPTSGGAFSRCVPCNCNGHA 112
R + L G R + L R + + G+ G F C
Sbjct: 426 TGPRCETDVNECLSGPCRNQATCLDRIGQFTCICMAGFT------GTF-------CE--V 470
Query: 113 DICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 168
DI + +S C+ C+D G +C C G+ G+ + V +C PC N CV
Sbjct: 471 DIDECQSSPCVNGGVCKDRVNGFSCT-CPSGFSGSTCQLDVDECASTPCRNGAKCVD-QP 528
Query: 169 DQVVCSECPRGYGG 182
D C C G+ G
Sbjct: 529 DGYEC-RCAEGFEG 541
Score = 116 (45.9 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 45/166 (27%), Positives = 63/166 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+ GG CE C GY G++ E V +C PC N G C+ L + + T +
Sbjct: 1101 CRGYMGGYVCE-CPTGYSGDSCEDDVDECASQPCQNGGSCIDLVAHYLCSCPPGTLGVLC 1159
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH--ADICDAESGRCI- 123
+ G +L G + GG C P H ADI + G C
Sbjct: 1160 EINEDDCGPGPSLDSGLRCLHNGTCVDLV-GGFRCNCPPGYTGLHCEADINECRPGTCHA 1218
Query: 124 -----CQDNTGGD-NCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
C + GG C C G+ G + A+ C+ PC + G C
Sbjct: 1219 AHTRDCLQDPGGHFRCI-CLPGFTGPRCQTALFPCESQPCQHGGQC 1263
Score = 111 (44.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 107 NCNGHADICDAESGRC--ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
+C D C A+ + C+ GG CE C GY G++ E V +C PC N G C+
Sbjct: 1082 HCEQEVDPCTAQPCQHGGTCRGYMGGYVCE-CPTGYSGDSCEDDVDECASQPCQNGGSCI 1140
Query: 165 QLDDDQVVCSECPRG 179
L +CS CP G
Sbjct: 1141 DLVA-HYLCS-CPPG 1153
Score = 107 (42.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 27/78 (34%), Positives = 36/78 (46%)
Query: 108 CNGHADICDAES---GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C + D C + GRC+ D +C CA GY G E V +C+ PC G C+
Sbjct: 544 CERNVDDCSPDPCHHGRCV--DGIASFSCA-CAPGYTGIRCESQVDECRSQPCRYGGKCL 600
Query: 165 QLDDDQVVCSECPRGYGG 182
L D + +C CP G G
Sbjct: 601 DLVD-KYLC-RCPPGTTG 616
Score = 92 (37.4 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
IC G C C G+ GN + V C Q PC N G CVQ
Sbjct: 978 ICNPTHSGFECT-CREGFTGNQCQNPVDWCSQAPCQNGGRCVQ 1019
Score = 91 (37.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 25/70 (35%), Positives = 33/70 (47%)
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+C A G+CI +D++ C C G G+ E V C PC + G C V C
Sbjct: 1056 LCQA-GGQCIDKDHS--HYCV-CPEGRMGSHCEQEVDPCTAQPCQHGGTCRGYMGGYV-C 1110
Query: 174 SECPRGYGGE 183
ECP GY G+
Sbjct: 1111 -ECPTGYSGD 1119
Score = 65 (27.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 6 ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
+C+D +C C G+ G + +C PC G CV
Sbjct: 635 VCRDGINRYDCV-CQPGFTGPLCNVEINECASSPCGEGGSCV 675
Score = 57 (25.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ICQDNTGGDNCERCARGYYG-NALEGAVTD-CKQCPCPNQGPC 46
+C D GG C C G+ G + D C+ PC G C
Sbjct: 710 VCHDAPGGFQCV-CDPGWSGPRCSQSLAPDACESQPCQAGGTC 751
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C + GG +C C G+ G + + DC C + C
Sbjct: 293 CFNLLGGHSCV-CVNGWTGESCSQNIDDCATAVCFHGATC 331
Score = 54 (24.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 19 CARGYYGNALEGAVTDCKQCPCPNQGPCV 47
C G+ G E V DC C N G CV
Sbjct: 226 CLPGFEGQNCEVNVDDCPGHRCLNGGTCV 254
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 17/56 (30%), Positives = 19/56 (33%)
Query: 5 CICQDNTGGDNCE---RCARGY--YGNALEGAVTDCKQCPCPN--QGPCVQLDDDQ 53
C C G CE C +G E C CP QGP Q D D+
Sbjct: 760 CTCAPGFQGHQCEVLSPCTPSLCEHGGHCESDPDQLTVCSCPPGWQGPRCQQDVDE 815
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 155 CPCPNQGPCVQLDDDQVVCSECPRGYGGEKMSPG 188
CP P V L V + PR +GG SPG
Sbjct: 2090 CPGPLADSSVTLSP--VDSLDSPRPFGGPPASPG 2121
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 5 CICQDNTGGDNCE 17
C C T G NCE
Sbjct: 608 CRCPPGTTGVNCE 620
>UNIPROTKB|I3LGD9 [details] [associations]
symbol:I3LGD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043236 "laminin binding" evidence=IEA] [GO:0043113
"receptor clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
InterPro:IPR011497 GeneTree:ENSGT00530000063501 EMBL:FP565685
Ensembl:ENSSSCT00000026215 Uniprot:I3LGD9
Length = 2039
Score = 138 (53.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 33/88 (37%), Positives = 43/88 (48%)
Query: 106 CNCNGHADI---CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCP 158
C CN H CD +G+C C+ GG C+RC G++ G VTD C C C
Sbjct: 796 CQCNPHGSYSGTCDPATGQCSCRPGVGGLKCDRCEPGFWN--FRGIVTDGRSGCTPCSCD 853
Query: 159 NQGPCVQLDDDQV--VCSECPRGYGGEK 184
QG V+ D +Q+ +CS C G G K
Sbjct: 854 PQG-AVRDDCEQMTGLCS-CKPGVAGPK 879
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/101 (32%), Positives = 47/101 (46%)
Query: 98 GAFSRCVPCNCNG-HADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD----C 152
G S C CN +G ++ CD +G+C C+ GG C+RC G++ G VTD C
Sbjct: 791 GCPSSC-QCNPHGSYSGTCDPATGQCSCRPGVGGLKCDRCEPGFWN--FRGIVTDGRSGC 847
Query: 153 KQCPCPNQGPCVQLDDDQVV-------------CSECPRGY 180
C C QG V+ D +Q+ C +CP G+
Sbjct: 848 TPCSCDPQG-AVRDDCEQMTGLCSCKPGVAGPKCGQCPDGH 887
Score = 114 (45.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 46/171 (26%), Positives = 72/171 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDDQVSNLGN 59
+C C+ GG C+RC G++ G VTD C C C QG V+ D +Q++ L +
Sbjct: 814 QCSCRPGVGGLKCDRCEPGFWN--FRGIVTDGRSGCTPCSCDPQG-AVRDDCEQMTGLCS 870
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
+ + G G AL G +P++ + +PC G + + +A S
Sbjct: 871 -CKPGVAGPKCGQCPDGHALGP------AGCETDPSAPKTCAE-MPCEF-GASCVEEAGS 921
Query: 120 GRCICQDNT--GGDNCERCAR-GY-YGNALEGAVTDCKQ---CPCPNQGPC 163
C+C T G + + C G YGN + C+Q + GPC
Sbjct: 922 AHCVCPTPTCLGANATKVCGSDGVTYGNECQLRTIACRQGLDISVQSLGPC 972
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 152 CKQCPCPNQGPCV-QLDDDQVVCSECPRGYGG 182
C PC + G C Q CS CP G GG
Sbjct: 1332 CDSQPCLHGGTCQDQGPGGAFTCS-CPAGRGG 1362
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 17/45 (37%), Positives = 18/45 (40%)
Query: 13 GDNCERCARGYYGNALEGAVTDCKQCPCPNQ-GPCVQLDDDQVSN 56
G CE A G G A V CK+ CPN P D SN
Sbjct: 183 GAVCEPSAEGP-GRA--SCV--CKKSTCPNVVAPVCGSDASTYSN 222
>UNIPROTKB|P21783 [details] [associations]
symbol:notch1 "Neurogenic locus notch protein homolog"
species:8355 "Xenopus laevis" [GO:0005654 "nucleoplasm"
evidence=TAS] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
InterPro:IPR022362 Pfam:PF00008 Pfam:PF00023 Pfam:PF06816
Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279 PRINTS:PR01452
PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50088
PROSITE:PS50258 SMART:SM00004 SMART:SM00179 SMART:SM00181
SMART:SM00248 InterPro:IPR000152 GO:GO:0016021 GO:GO:0007399
GO:GO:0005654 GO:GO:0030154 GO:GO:0006355 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007219 GO:GO:0005509 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 GO:GO:0050793
Pfam:PF12661 SUPFAM:SSF90193 HOVERGEN:HBG052650 KO:K02599
InterPro:IPR024600 Pfam:PF11936 CTD:4851 EMBL:M33874 PIR:A35844
RefSeq:NP_001081074.1 UniGene:Xl.1057 ProteinModelPortal:P21783
SMR:P21783 GeneID:394367 KEGG:xla:394367 Xenbase:XB-GENE-865261
Uniprot:P21783
Length = 2524
Score = 144 (55.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/187 (26%), Positives = 69/187 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C+D TG C C G+ G + + +C PC N G C+ D V+ G + +
Sbjct: 767 CKDMTGAYICT-CKAGFSGPNCQTNINECSSNPCLNHGTCI----DDVA--GYKCNCMLP 819
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI--- 123
G LA + + G E FS C C C+ + C+
Sbjct: 820 YT-GAICEAVLAPCAGSPCKNGGRCKESEDFETFS-C-ECPPGWQGQTCEIDMNECVNRP 876
Query: 124 ------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECP 177
CQ+ G C C GY G E + DC+ PC N G C D + CP
Sbjct: 877 CRNGATCQNTNGSYKCN-CKPGYTGRNCEMDIDDCQPNPCHNGGSCS--DGINMFFCNCP 933
Query: 178 RGYGGEK 184
G+ G K
Sbjct: 934 AGFRGPK 940
Score = 134 (52.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 51/190 (26%), Positives = 74/190 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGP--CVQLDDDQVSNLGNR-TRI 63
C D GG NC C G+ G EG V +C PC ++G C+QL +D T
Sbjct: 1243 CIDRVGGYNCI-CPPGFVGERCEGDVNECLSNPCDSRGTQNCIQLVNDYRCECRQGFTGR 1301
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGRCI 123
R +S + G +G+ + T G +C P +G C+ +S C
Sbjct: 1302 RCESVVDG--CKGMPCRNGGTCAVASN----TERGFICKCPP-GFDGAT--CEYDSRTCS 1352
Query: 124 ---CQDNTG-------GDNCERCARGYYGNALE-GAVTDCKQCPCPNQGPCVQLDDDQVV 172
CQ N G C C+ GY G + ++ C PC N G C ++
Sbjct: 1353 NLRCQ-NGGTCISVLTSSKCV-CSEGYTGATCQYPVISPCASHPCYNGGTCQFFAEEPFF 1410
Query: 173 CSECPRGYGG 182
CP+ + G
Sbjct: 1411 QCFCPKNFNG 1420
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 50/192 (26%), Positives = 72/192 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D G C C GY G E + +C PC + G C+ D++ N R
Sbjct: 466 CLDQIGEFQCI-CMPGYEGLYCETNIDECASNPCLHNGKCI----DKI----NEFRCDCP 516
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV--P----CNCN-GHADI-CDAE 118
+ GN L + + T P GA +C+ P C C G C+ +
Sbjct: 517 TGFSGN------LCQHDFDECTS---TPCKNGA--KCLDGPNSYTCQCTEGFTGRHCEQD 565
Query: 119 SGRCI--------CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQ 170
CI C+D C C GY G + + +C PC N G C ++
Sbjct: 566 INECIPDPCHYGTCKDGIATFTC-LCRPGYTGRLCDNDINECLSKPCLNGGQCTDRENGY 624
Query: 171 VVCSECPRGYGG 182
+ C+ CP+G G
Sbjct: 625 I-CT-CPKGTTG 634
Score = 118 (46.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +CE C GY+G + +C PC N G C+
Sbjct: 1141 CEEQVDECSPNPCQNG-ATCTDYLGGYSCE-CVAGYHGVNCSEEINECLSHPCQNGGTCI 1198
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1199 DLINTYK-CS-CPRGTQG 1214
Score = 91 (37.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 25/73 (34%), Positives = 31/73 (42%)
Query: 114 ICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVC 173
+C SG C+ +TG + RC GY G+ E V +C PC N C C
Sbjct: 1114 LC-RNSGMCV---DTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYS-C 1168
Query: 174 SECPRGYGGEKMS 186
EC GY G S
Sbjct: 1169 -ECVAGYHGVNCS 1180
Score = 82 (33.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
CQD+ G C C +GY G + V C PC N G C Q ++
Sbjct: 1035 CQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNN 1078
Score = 65 (27.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
C + G C C + G + C PC N G C Q DD
Sbjct: 194 CINEFGSYRCT-CQNRFTGRNCDEPYVPCNPSPCLNGGTCRQTDD 237
Score = 64 (27.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 46
C D C+ C G+ G+ + + +C PC N G C
Sbjct: 997 CIDGINTFTCQ-CPPGFTGSYCQHDINECDSKPCLNGGTC 1035
>UNIPROTKB|F1SI04 [details] [associations]
symbol:SNED1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR003886 InterPro:IPR003961
InterPro:IPR018097 Pfam:PF00008 Pfam:PF00041 Pfam:PF06119
PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS50853 PROSITE:PS51220
SMART:SM00060 SMART:SM00179 SMART:SM00181 SMART:SM00539
InterPro:IPR000152 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007160 PROSITE:PS00010 InterPro:IPR000436
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 Pfam:PF12661
GeneTree:ENSGT00700000104308 CTD:25992 OMA:KSFPVWE EMBL:FP102549
RefSeq:XP_003133861.2 Ensembl:ENSSSCT00000017836 GeneID:100512566
KEGG:ssc:100512566 Uniprot:F1SI04
Length = 1414
Score = 141 (54.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 56/192 (29%), Positives = 72/192 (37%)
Query: 4 RCICQDNTGGDN--CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRT 61
+CI TG + C C G+ G V +C PC N G C D S
Sbjct: 283 KCIDDCVTGSPSYTCS-CLSGFTGRRCHLDVNECASHPCRNGGTCTS-GVDSFS------ 334
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHA---DICDAE 118
+ + GG+ L G + G A C P G A D+ +
Sbjct: 335 -CQCPAGFGGHTCETAQLPCDAKECENGGWCQAEGGTAVCVC-PAGYTGAACETDVDECR 392
Query: 119 SGRCI----CQDNTGGDNCERCARGYYGNALEGA---VTD-CKQCPCPNQGPCVQLDDDQ 170
SG C+ C D G +C CA + G E V+D C PC N G CV D+
Sbjct: 393 SGPCLNGGSCVDLLGNFSC-LCAEPFQGPRCETGKPPVSDACLSAPCQNGGTCVDADEGY 451
Query: 171 VVCSECPRGYGG 182
V C ECP G+ G
Sbjct: 452 V-C-ECPEGFMG 461
>UNIPROTKB|K7GKX0 [details] [associations]
symbol:JAG2 "Delta-like protein" species:9823 "Sus scrofa"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001007 InterPro:IPR001774
InterPro:IPR001881 InterPro:IPR011651 InterPro:IPR018097
InterPro:IPR026219 Pfam:PF00008 Pfam:PF01414 Pfam:PF07645
Pfam:PF07657 PRINTS:PR02059 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50184 PROSITE:PS51051 SMART:SM00051 SMART:SM00179
SMART:SM00181 SMART:SM00214 InterPro:IPR000152 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 PROSITE:PS00010 Pfam:PF12661
GeneTree:ENSGT00700000104308 EMBL:CU695123
Ensembl:ENSSSCT00000034111 Uniprot:K7GKX0
Length = 1009
Score = 139 (54.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 50/183 (27%), Positives = 70/183 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVSNLGNRTRIRI 65
C + G C C G+ G + +C PC G CV Q+D + + +
Sbjct: 341 CHEVPSGFECH-CPAGWSGPTCALDIDECASSPCAAGGTCVDQVDGFEC--ICPEQWVGA 397
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP--CNCNGHADICDAESGRC- 122
L N G L + + GG + CVP N H +I D G+C
Sbjct: 398 TCQLDANECEGKPC-------LNAFSCKNLIGGYYCDCVPGWMGVNCHININDCR-GQCQ 449
Query: 123 ---ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D G C C RG+ G E + +C PC + G C L D C CP+G
Sbjct: 450 HGGTCKDLVNGYQCV-CPRGFGGRHCERELDECASSPC-HGGFCQDLVDG-FRC-HCPQG 505
Query: 180 YGG 182
+ G
Sbjct: 506 FSG 508
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 51/188 (27%), Positives = 65/188 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD----DQVSN-LGNRT 61
C D G C C + G + +C+ PC N C L D V +G
Sbjct: 379 CVDQVDGFECI-CPEQWVGATCQLDANECEGKPCLNAFSCKNLIGGYYCDCVPGWMGVNC 437
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
I I G + G YQ P G R +C D C S
Sbjct: 438 HININDCRGQCQHGGTCKDLVNGYQCVC----PRGFGG--R----HCERELDEC--ASSP 485
Query: 122 C---ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
C CQD G C C +G+ G E + C+ PC N PC L+ D C+ CP
Sbjct: 486 CHGGFCQDLVDGFRCH-CPQGFSGPLCEVDIDFCEPSPCQNGAPCYNLEGDYY-CA-CPD 542
Query: 179 GYGGEKMS 186
G+ S
Sbjct: 543 HVSGKNCS 550
Score = 94 (38.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 112 ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
+ +C G C+ Q G +C C G+ G + DC PC N G C+ + D
Sbjct: 582 SSVCGPH-GHCVSQPG-GNFSCV-CDSGFTGTYCHENIDDCLGQPCRNGGTCID-EVDAF 637
Query: 172 VCSECPRGYGGE 183
C CP G+ GE
Sbjct: 638 RCF-CPSGWEGE 648
Score = 85 (35.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 27/83 (32%), Positives = 32/83 (38%)
Query: 101 SRCVPCNC-NGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
S C+P C NG + +S CIC+D G C N DC PC N
Sbjct: 732 SSCLPNPCVNGGTCVGSGDSFSCICRDGWEGRTCTH-------NT-----NDCNPLPCYN 779
Query: 160 QGPCVQLDDDQVVCSECPRGYGG 182
G CV D EC G+ G
Sbjct: 780 GGVCV--DGVNWFRCECAPGFAG 800
Score = 81 (33.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 29/95 (30%), Positives = 39/95 (41%)
Query: 97 GGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNC--E----RC--ARGYYGNALEGA 148
GG FS CV C+ C C+ Q G C E RC G+ G +
Sbjct: 596 GGNFS-CV-CDSGFTGTYCHENIDDCLGQPCRNGGTCIDEVDAFRCFCPSGWEGELCDTN 653
Query: 149 VTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
DC PC ++G C L +D C+ C G+ G+
Sbjct: 654 PNDCLPDPCHSRGRCYDLVND-FYCA-CDDGWKGK 686
Score = 76 (31.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGN--ALEGAVTDCK---QCPCPN--QGPCVQLDDDQVSN 56
RC+C D G NCER N A G+ + +C CP GP LD D+ ++
Sbjct: 311 RCVCPDGYSGRNCERAEHACASNPCANGGSCHEVPSGFECHCPAGWSGPTCALDIDECAS 370
Score = 69 (29.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 4 RCICQDNTGGDNCER----CARG-YYGNALEGAVTDCKQCPCPN--QGPCVQLDDD 52
+C+C GG +CER CA +G + V D +C CP GP ++D D
Sbjct: 462 QCVCPRGFGGRHCERELDECASSPCHGGFCQDLV-DGFRCHCPQGFSGPLCEVDID 516
>UNIPROTKB|F1S9V0 [details] [associations]
symbol:JAG2 "Delta-like protein" species:9823 "Sus scrofa"
[GO:0045061 "thymic T cell selection" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0042492
"gamma-delta T cell differentiation" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0009912
"auditory receptor cell fate commitment" evidence=IEA] [GO:0008083
"growth factor activity" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA]
[GO:0003016 "respiratory system process" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001501
"skeletal system development" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001007
InterPro:IPR001774 InterPro:IPR001881 InterPro:IPR011651
InterPro:IPR018097 InterPro:IPR026219 Pfam:PF00008 Pfam:PF01414
Pfam:PF07645 Pfam:PF07657 PRINTS:PR02059 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS50184 PROSITE:PS51051 SMART:SM00051
SMART:SM00179 SMART:SM00181 SMART:SM00214 InterPro:IPR000152
GO:GO:0016021 GO:GO:0030155 GO:GO:0042981 GO:GO:0001701
GO:GO:0007219 GO:GO:0005509 GO:GO:0007283 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0042127 GO:GO:0001501 PROSITE:PS01186
GO:GO:0003016 GO:GO:0042475 PROSITE:PS00010 GO:GO:0016331
GO:GO:0045061 Pfam:PF12661 GeneTree:ENSGT00700000104308 OMA:HHPCTNG
EMBL:CU695123 Ensembl:ENSSSCT00000002840 Uniprot:F1S9V0
Length = 1018
Score = 139 (54.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 50/183 (27%), Positives = 70/183 (38%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-QLDDDQVSNLGNRTRIRI 65
C + G C C G+ G + +C PC G CV Q+D + + +
Sbjct: 336 CHEVPSGFECH-CPAGWSGPTCALDIDECASSPCAAGGTCVDQVDGFEC--ICPEQWVGA 392
Query: 66 KSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP--CNCNGHADICDAESGRC- 122
L N G L + + GG + CVP N H +I D G+C
Sbjct: 393 TCQLDANECEGKPC-------LNAFSCKNLIGGYYCDCVPGWMGVNCHININDCR-GQCQ 444
Query: 123 ---ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRG 179
C+D G C C RG+ G E + +C PC + G C L D C CP+G
Sbjct: 445 HGGTCKDLVNGYQCV-CPRGFGGRHCERELDECASSPC-HGGFCQDLVDG-FRC-HCPQG 500
Query: 180 YGG 182
+ G
Sbjct: 501 FSG 503
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 51/188 (27%), Positives = 65/188 (34%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD----DQVSN-LGNRT 61
C D G C C + G + +C+ PC N C L D V +G
Sbjct: 374 CVDQVDGFECI-CPEQWVGATCQLDANECEGKPCLNAFSCKNLIGGYYCDCVPGWMGVNC 432
Query: 62 RIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAESGR 121
I I G + G YQ P G R +C D C S
Sbjct: 433 HININDCRGQCQHGGTCKDLVNGYQCVC----PRGFGG--R----HCERELDEC--ASSP 480
Query: 122 C---ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPR 178
C CQD G C C +G+ G E + C+ PC N PC L+ D C+ CP
Sbjct: 481 CHGGFCQDLVDGFRCH-CPQGFSGPLCEVDIDFCEPSPCQNGAPCYNLEGDYY-CA-CPD 537
Query: 179 GYGGEKMS 186
G+ S
Sbjct: 538 HVSGKNCS 545
Score = 94 (38.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 112 ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
+ +C G C+ Q G +C C G+ G + DC PC N G C+ + D
Sbjct: 577 SSVCGPH-GHCVSQPG-GNFSCV-CDSGFTGTYCHENIDDCLGQPCRNGGTCID-EVDAF 632
Query: 172 VCSECPRGYGGE 183
C CP G+ GE
Sbjct: 633 RCF-CPSGWEGE 643
Score = 85 (35.0 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 27/83 (32%), Positives = 32/83 (38%)
Query: 101 SRCVPCNC-NGHADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPN 159
S C+P C NG + +S CIC+D G C N DC PC N
Sbjct: 727 SSCLPNPCVNGGTCVGSGDSFSCICRDGWEGRTCTH-------NT-----NDCNPLPCYN 774
Query: 160 QGPCVQLDDDQVVCSECPRGYGG 182
G CV D EC G+ G
Sbjct: 775 GGVCV--DGVNWFRCECAPGFAG 795
Score = 81 (33.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 29/95 (30%), Positives = 39/95 (41%)
Query: 97 GGAFSRCVPCNCNGHADICDAESGRCICQDNTGGDNC--E----RC--ARGYYGNALEGA 148
GG FS CV C+ C C+ Q G C E RC G+ G +
Sbjct: 591 GGNFS-CV-CDSGFTGTYCHENIDDCLGQPCRNGGTCIDEVDAFRCFCPSGWEGELCDTN 648
Query: 149 VTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
DC PC ++G C L +D C+ C G+ G+
Sbjct: 649 PNDCLPDPCHSRGRCYDLVND-FYCA-CDDGWKGK 681
Score = 76 (31.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 4 RCICQDNTGGDNCERCARGYYGN--ALEGAVTDCK---QCPCPN--QGPCVQLDDDQVSN 56
RC+C D G NCER N A G+ + +C CP GP LD D+ ++
Sbjct: 306 RCVCPDGYSGRNCERAEHACASNPCANGGSCHEVPSGFECHCPAGWSGPTCALDIDECAS 365
Score = 69 (29.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 4 RCICQDNTGGDNCER----CARG-YYGNALEGAVTDCKQCPCPN--QGPCVQLDDD 52
+C+C GG +CER CA +G + V D +C CP GP ++D D
Sbjct: 457 QCVCPRGFGGRHCERELDECASSPCHGGFCQDLV-DGFRCHCPQGFSGPLCEVDID 511
>UNIPROTKB|F1NZ70 [details] [associations]
symbol:Gga.54229 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001047 "core promoter binding" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0002040 "sprouting
angiogenesis" evidence=IEA] [GO:0002193 "MAML1-RBP-Jkappa- ICN1
complex" evidence=IEA] [GO:0002437 "inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0003160 "endocardium
morphogenesis" evidence=IEA] [GO:0003162 "atrioventricular node
development" evidence=IEA] [GO:0003169 "coronary vein
morphogenesis" evidence=IEA] [GO:0003180 "aortic valve
morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular valve
morphogenesis" evidence=IEA] [GO:0003184 "pulmonary valve
morphogenesis" evidence=IEA] [GO:0003192 "mitral valve formation"
evidence=IEA] [GO:0003198 "epithelial to mesenchymal transition
involved in endocardial cushion formation" evidence=IEA]
[GO:0003213 "cardiac right atrium morphogenesis" evidence=IEA]
[GO:0003214 "cardiac left ventricle morphogenesis" evidence=IEA]
[GO:0003219 "cardiac right ventricle formation" evidence=IEA]
[GO:0003222 "ventricular trabecula myocardium morphogenesis"
evidence=IEA] [GO:0003241 "growth involved in heart morphogenesis"
evidence=IEA] [GO:0003256 "regulation of transcription from RNA
polymerase II promoter involved in myocardial precursor cell
differentiation" evidence=IEA] [GO:0003270 "Notch signaling pathway
involved in regulation of secondary heart field cardioblast
proliferation" evidence=IEA] [GO:0003273 "cell migration involved
in endocardial cushion formation" evidence=IEA] [GO:0003344
"pericardium morphogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004857 "enzyme inhibitor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007221
"positive regulation of transcription of Notch receptor target"
evidence=IEA] [GO:0007386 "compartment pattern specification"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007440
"foregut morphogenesis" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IEA] [GO:0009912 "auditory receptor cell fate
commitment" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0010001 "glial cell differentiation" evidence=IEA] [GO:0010718
"positive regulation of epithelial to mesenchymal transition"
evidence=IEA] [GO:0010812 "negative regulation of cell-substrate
adhesion" evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IEA] [GO:0014807 "regulation of
somitogenesis" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030279 "negative regulation of ossification" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0031069 "hair
follicle morphogenesis" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032495 "response to muramyl dipeptide"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0042640 "anagen" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045618 "positive regulation of keratinocyte differentiation"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045955 "negative
regulation of calcium ion-dependent exocytosis" evidence=IEA]
[GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IEA]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048711 "positive regulation of
astrocyte differentiation" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060045 "positive regulation of
cardiac muscle cell proliferation" evidence=IEA] [GO:0060253
"negative regulation of glial cell proliferation" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0060528 "secretory columnal luminar epithelial cell
differentiation involved in prostate glandular acinus development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060768 "regulation of epithelial cell
proliferation involved in prostate gland development" evidence=IEA]
[GO:0060842 "arterial endothelial cell differentiation"
evidence=IEA] [GO:0060843 "venous endothelial cell differentiation"
evidence=IEA] [GO:0060948 "cardiac vascular smooth muscle cell
development" evidence=IEA] [GO:0060956 "endocardial cell
differentiation" evidence=IEA] [GO:0060979 "vasculogenesis involved
in coronary vascular morphogenesis" evidence=IEA] [GO:0060982
"coronary artery morphogenesis" evidence=IEA] [GO:0061419 "positive
regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0070986 "left/right axis
specification" evidence=IEA] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEA] [GO:0072017
"distal tubule development" evidence=IEA] [GO:0072044 "collecting
duct development" evidence=IEA] [GO:0072144 "glomerular mesangial
cell development" evidence=IEA] [GO:0072602 "interleukin-4
secretion" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0097150
"neuronal stem cell maintenance" evidence=IEA] [GO:1901201
"regulation of extracellular matrix assembly" evidence=IEA]
[GO:2000737 "negative regulation of stem cell differentiation"
evidence=IEA] [GO:2000811 "negative regulation of anoikis"
evidence=IEA] [GO:2000974 "negative regulation of pro-B cell
differentiation" evidence=IEA] InterPro:IPR002110
InterPro:IPR000742 InterPro:IPR000800 InterPro:IPR001881
InterPro:IPR008297 InterPro:IPR010660 InterPro:IPR011656
InterPro:IPR018097 InterPro:IPR022362 Pfam:PF00008 Pfam:PF00066
Pfam:PF06816 Pfam:PF07645 Pfam:PF07684 PIRSF:PIRSF002279
PRINTS:PR01452 PRINTS:PR01984 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152 GO:GO:0016021
GO:GO:0007275 GO:GO:0005634 GO:GO:0030154 GO:GO:0008284
GO:GO:0004857 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0000122
GO:GO:0030513 GO:GO:0010718 PROSITE:PS01186 GO:GO:0001047
GO:GO:0046427 PROSITE:PS00010 GO:GO:0010812 GO:GO:0045668
GO:GO:2000811 GO:GO:0010832 GO:GO:0045662 GO:GO:0030514
GeneTree:ENSGT00700000104305 SUPFAM:SSF90193 GO:GO:2000974
GO:GO:2000737 GO:GO:0061419 GO:GO:0002193 InterPro:IPR024600
Pfam:PF11936 EMBL:AADN02026409 EMBL:AADN02026410 EMBL:AADN02026411
EMBL:AADN02026412 EMBL:AADN02026413 EMBL:AADN02026414
IPI:IPI00584675 Ensembl:ENSGALT00000003754 Uniprot:F1NZ70
Length = 2548
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 58/197 (29%), Positives = 79/197 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQ-----------------CPCPN--QGPCV 47
C +N GG NC C G+ G + DC C CP+ G
Sbjct: 308 CHNNHGGYNCV-CVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCECPHGRTGLLC 366
Query: 48 QLDDDQVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCN 107
LDD +SN N S N G A+ +GY G A ++ V
Sbjct: 367 HLDDACISNPCNEG-----SNCDTNPVNGKAICTCP----SGY-----MGPACNQDVD-E 411
Query: 108 CNGHADICDAESGRCICQDNTGGD-NCERCARGYYGNALEGAVTDCKQCPCPNQGPCV-Q 165
C+ A+ C+ +G+CI NT G C+ C +GY G E V +C PC N C+ Q
Sbjct: 412 CSLGANPCE-HAGKCI---NTQGSFQCQ-CLQGYSGPRCEIDVNECLSNPCQNDATCLDQ 466
Query: 166 LDDDQVVCSECPRGYGG 182
+ + Q +C P GY G
Sbjct: 467 IGEFQCICM--P-GYEG 480
Score = 120 (47.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 52/191 (27%), Positives = 69/191 (36%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
CQ+ G C C G+ G + + DC+ PC N G C D +
Sbjct: 881 CQNTNGSYRC-LCRVGFAGRNCDTDIDDCQPNPCHNGGSC----SDGIGTF-------FC 928
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGA-FSRCV---PCNC-NGHADI-C----- 115
L G RGL + + P GA + CV C C +G + I C
Sbjct: 929 ECLAG--FRGL----KCEEDINECASNPCKNGANCTDCVNSYTCTCPSGFSGIHCENNTP 982
Query: 116 DAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
D C C D C C G+ G+ E + +C PC N G C Q
Sbjct: 983 DCTESSCFNGGTCVDGINTFTC-LCPSGFTGSYCEHNINECDSKPCLNGGTC-QDSYGTY 1040
Query: 172 VCSECPRGYGG 182
C+ CP+GY G
Sbjct: 1041 KCT-CPQGYTG 1050
Score = 118 (46.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 28/78 (35%), Positives = 36/78 (46%)
Query: 108 CNGHADICD---AESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C D C ++G C D GG +CE C GY+G + +C PC N G C+
Sbjct: 1139 CEEQVDECSPNPCQNG-ATCTDYLGGYSCE-CVAGYHGVNCSEEINECLSHPCQNGGTCI 1196
Query: 165 QLDDDQVVCSECPRGYGG 182
L + CS CPRG G
Sbjct: 1197 DLINTYK-CS-CPRGTQG 1212
Score = 92 (37.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 27/75 (36%), Positives = 31/75 (41%)
Query: 112 ADICDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQV 171
A +C SG C+ NT C RC GY G+ E V +C PC N C
Sbjct: 1110 AHLC-RNSGLCVDSGNT--HFC-RCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYS 1165
Query: 172 VCSECPRGYGGEKMS 186
C EC GY G S
Sbjct: 1166 -C-ECVAGYHGVNCS 1178
Score = 82 (33.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
CQD+ G C C +GY G + V C PC N G C Q ++
Sbjct: 1033 CQDSYGTYKCT-CPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNN 1076
Score = 45 (20.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 5 CICQDNTGGDNCE 17
C+C T G NCE
Sbjct: 623 CLCLKGTTGPNCE 635
>WB|WBGene00000415 [details] [associations]
symbol:ced-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0043654
"recognition of apoptotic cell" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=ISS;IPI] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0031260 "pseudopodium membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0001891 "phagocytic
cup" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 139 (54.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 55/202 (27%), Positives = 80/202 (39%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAV----TDC-KQ---CPCP--NQG-PCVQLDDD 52
C CQ G +C C++G YG + E + C KQ C CP +G C Q D
Sbjct: 575 CTCQPGFFGSDCSTTCSKGKYGESCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDP 634
Query: 53 QVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYH--HEPTSGGAFSRCVP-CNC- 108
+ + + G+ L+ +G H H +G C C+C
Sbjct: 635 NTFGFLCQETVTPSPCASTDPKNGVCLSCPPGS--SGIHCEHNCPAGSYGDGCQQVCSCA 692
Query: 109 NGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQCP----CPN-QGP 162
+GH CD +G CIC+ G C E+C G YG G DC +C C + G
Sbjct: 693 DGHG--CDPTTGECICEPGYHGKTCSEKCPDGKYGY---GCALDCPKCASGSTCDHINGL 747
Query: 163 CV-QLDDDQVVCSE-CPRGYGG 182
C+ + +C+ C G+ G
Sbjct: 748 CICPAGLEGALCTRPCSAGFWG 769
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDC-KQCPCPNQGPC 163
C+C A+ CD E G CIC G+ CE+ C +G +C K CPC N G C
Sbjct: 164 CDCENGAN-CDPELGTCICTSGFQGERCEKPCPDNKWG-------PNCVKSCPCQNGGKC 215
Query: 164 VQLDDDQVVCSECPRGYGGE 183
+ + + VCS+ G+GGE
Sbjct: 216 NK--EGKCVCSD---GWGGE 230
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 60/207 (28%), Positives = 82/207 (39%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPN------QGPCVQLDD---DQV 54
CIC G+ CE+ C +G V K CPC N +G CV D +
Sbjct: 179 CICTSGFQGERCEKPCPDNKWG---PNCV---KSCPCQNGGKCNKEGKCVCSDGWGGEFC 232
Query: 55 SNLGNRTRIRIKSALGGNRTRGLALTRQTHYQL---TGYH----HEPTSGGAF-SRCVP- 105
N + + N G A T+ + +GYH S G F S C
Sbjct: 233 LNKCEEGKFGAECKFECNCQNG-ATCDNTNGKCICKSGYHGALCENECSVGFFGSGCTQK 291
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQ-CPCPNQGPC 163
C+C + + CD+ SG C C TG +C+ C+RG +G L+ CKQ C CP
Sbjct: 292 CDCLNNQN-CDSSSGECKCIGWTG-KHCDIGCSRGRFG--LQ-----CKQNCTCPG---- 338
Query: 164 VQLDDDQVVCS------ECPRGYGGEK 184
++ D C +C GY G K
Sbjct: 339 LEFSDSNASCDAKTGQCQCESGYKGPK 365
Score = 109 (43.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/94 (31%), Positives = 39/94 (41%)
Query: 94 PTSGGAFSR-CVP-CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVT 150
P S G + C C C C+A++G C C GD C++ C GYYG
Sbjct: 762 PCSAGFWGNGCRQVCRCTSEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYG-------P 814
Query: 151 DC-KQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
DC K+C C QG + C G+ GE
Sbjct: 815 DCIKKCKC--QGTATSSCNRVSGACHCHPGFTGE 846
Score = 109 (43.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCK-QCPCPNQGPC 163
C+ N HA C+ E+G C+C+ G NC E C +YG +C QC C +G
Sbjct: 431 CDWN-HASECNPETGSCVCKPGRTGKNCSEPCPLDFYG-------PNCAHQCQCNQRG-- 480
Query: 164 VQLDDDQVVCSECPRGYGGEK 184
V D C +C RG+ G +
Sbjct: 481 VGCDGADGKC-QCDRGWTGHR 500
Score = 92 (37.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/84 (29%), Positives = 31/84 (36%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C CN CD G+C C G CE C +G E K+C CP C
Sbjct: 474 CQCNQRGVGCDGADGKCQCDRGWTGHRCEHHCPADTFGANCE------KRCKCPKGIGCD 527
Query: 165 QLDDDQVVCSECPRGYGGEKMSPG 188
+ + C+ CP G G G
Sbjct: 528 PITGE---CT-CPAGLQGANCDIG 547
Score = 69 (29.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 5 CICQDNTGGDNCE-RCARGYYG-NALEGAVTDCKQCP-C-PNQGPCV 47
C C+ GDNCE C++ YG N + A+ D C P G CV
Sbjct: 401 CRCKPGFYGDNCELACSKDSYGPNCEKQAMCDWNHASECNPETGSCV 447
Score = 53 (23.7 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 4 RCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQ-CPC-PNQGPCV 47
+C C GG C C+ G +G + DC+ C P G C+
Sbjct: 135 KCECDPGYGGKYCASSCSVGTWGLGCSKSC-DCENGANCDPELGTCI 180
>UNIPROTKB|Q9XWD6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6239 "Caenorhabditis elegans" [GO:0001845 "phagolysosome
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IDA;IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0034620 "cellular response to unfolded protein"
evidence=IDA] [GO:0045184 "establishment of protein localization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IDA]
[GO:0012501 "programmed cell death" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 139 (54.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 55/202 (27%), Positives = 80/202 (39%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAV----TDC-KQ---CPCP--NQG-PCVQLDDD 52
C CQ G +C C++G YG + E + C KQ C CP +G C Q D
Sbjct: 575 CTCQPGFFGSDCSTTCSKGKYGESCELSCPCSDASCSKQTGKCLCPLGTKGVSCDQKCDP 634
Query: 53 QVSNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYH--HEPTSGGAFSRCVP-CNC- 108
+ + + G+ L+ +G H H +G C C+C
Sbjct: 635 NTFGFLCQETVTPSPCASTDPKNGVCLSCPPGS--SGIHCEHNCPAGSYGDGCQQVCSCA 692
Query: 109 NGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQCP----CPN-QGP 162
+GH CD +G CIC+ G C E+C G YG G DC +C C + G
Sbjct: 693 DGHG--CDPTTGECICEPGYHGKTCSEKCPDGKYGY---GCALDCPKCASGSTCDHINGL 747
Query: 163 CV-QLDDDQVVCSE-CPRGYGG 182
C+ + +C+ C G+ G
Sbjct: 748 CICPAGLEGALCTRPCSAGFWG 769
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDC-KQCPCPNQGPC 163
C+C A+ CD E G CIC G+ CE+ C +G +C K CPC N G C
Sbjct: 164 CDCENGAN-CDPELGTCICTSGFQGERCEKPCPDNKWG-------PNCVKSCPCQNGGKC 215
Query: 164 VQLDDDQVVCSECPRGYGGE 183
+ + + VCS+ G+GGE
Sbjct: 216 NK--EGKCVCSD---GWGGE 230
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 60/207 (28%), Positives = 82/207 (39%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPN------QGPCVQLDD---DQV 54
CIC G+ CE+ C +G V K CPC N +G CV D +
Sbjct: 179 CICTSGFQGERCEKPCPDNKWG---PNCV---KSCPCQNGGKCNKEGKCVCSDGWGGEFC 232
Query: 55 SNLGNRTRIRIKSALGGNRTRGLALTRQTHYQL---TGYH----HEPTSGGAF-SRCVP- 105
N + + N G A T+ + +GYH S G F S C
Sbjct: 233 LNKCEEGKFGAECKFECNCQNG-ATCDNTNGKCICKSGYHGALCENECSVGFFGSGCTQK 291
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQ-CPCPNQGPC 163
C+C + + CD+ SG C C TG +C+ C+RG +G L+ CKQ C CP
Sbjct: 292 CDCLNNQN-CDSSSGECKCIGWTG-KHCDIGCSRGRFG--LQ-----CKQNCTCPG---- 338
Query: 164 VQLDDDQVVCS------ECPRGYGGEK 184
++ D C +C GY G K
Sbjct: 339 LEFSDSNASCDAKTGQCQCESGYKGPK 365
Score = 109 (43.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 30/94 (31%), Positives = 39/94 (41%)
Query: 94 PTSGGAFSR-CVP-CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVT 150
P S G + C C C C+A++G C C GD C++ C GYYG
Sbjct: 762 PCSAGFWGNGCRQVCRCTSEYKQCNAQTGECSCPAGFQGDRCDKPCEDGYYG-------P 814
Query: 151 DC-KQCPCPNQGPCVQLDDDQVVCSECPRGYGGE 183
DC K+C C QG + C G+ GE
Sbjct: 815 DCIKKCKC--QGTATSSCNRVSGACHCHPGFTGE 846
Score = 109 (43.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCK-QCPCPNQGPC 163
C+ N HA C+ E+G C+C+ G NC E C +YG +C QC C +G
Sbjct: 431 CDWN-HASECNPETGSCVCKPGRTGKNCSEPCPLDFYG-------PNCAHQCQCNQRG-- 480
Query: 164 VQLDDDQVVCSECPRGYGGEK 184
V D C +C RG+ G +
Sbjct: 481 VGCDGADGKC-QCDRGWTGHR 500
Score = 92 (37.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/84 (29%), Positives = 31/84 (36%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C CN CD G+C C G CE C +G E K+C CP C
Sbjct: 474 CQCNQRGVGCDGADGKCQCDRGWTGHRCEHHCPADTFGANCE------KRCKCPKGIGCD 527
Query: 165 QLDDDQVVCSECPRGYGGEKMSPG 188
+ + C+ CP G G G
Sbjct: 528 PITGE---CT-CPAGLQGANCDIG 547
Score = 69 (29.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 5 CICQDNTGGDNCE-RCARGYYG-NALEGAVTDCKQCP-C-PNQGPCV 47
C C+ GDNCE C++ YG N + A+ D C P G CV
Sbjct: 401 CRCKPGFYGDNCELACSKDSYGPNCEKQAMCDWNHASECNPETGSCV 447
Score = 53 (23.7 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 4 RCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQ-CPC-PNQGPCV 47
+C C GG C C+ G +G + DC+ C P G C+
Sbjct: 135 KCECDPGYGGKYCASSCSVGTWGLGCSKSC-DCENGANCDPELGTCI 180
>UNIPROTKB|Q8QGG9 [details] [associations]
symbol:Q8QGG9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 eggNOG:COG4886 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 PROSITE:PS00010 HSSP:P00743
GeneTree:ENSGT00700000104083 HOGENOM:HOG000116120 EMBL:AADN02046435
EMBL:AADN02046436 EMBL:AADN02046437 EMBL:AADN02046438
EMBL:AADN02046439 EMBL:AADN02046440 EMBL:AADN02046441
EMBL:AADN02046442 EMBL:AF461019 IPI:IPI00820003 UniGene:Gga.2156
UniGene:Gga.50644 STRING:Q8QGG9 Ensembl:ENSGALT00000039421
InParanoid:Q8QGG9 Uniprot:Q8QGG9
Length = 238
Score = 107 (42.7 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 34/105 (32%), Positives = 44/105 (41%)
Query: 94 PTSGGAFSRCVP----CNCNGHADICDAESGRCI----CQDNTGGDNCERCARGYYGNAL 145
PTS G C P NC+ D D + RC C D G +C CA GY G
Sbjct: 87 PTSQGPRCECAPGYVGTNCS--KDFDDCQDHRCQNNARCVDEVNGYSC-LCAEGYSGQLC 143
Query: 146 E------GAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGGEK 184
E G C++ C N CV+ + +C +C G+GG K
Sbjct: 144 EMPPHAAGQPGLCERAECQNGAACVERGS-RALC-QCLPGFGGPK 186
Score = 104 (41.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/88 (32%), Positives = 34/88 (38%)
Query: 108 CNGHADICDAESGRC----ICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPC 163
C D C AE C C + G CE CA GY G DC+ C N C
Sbjct: 65 CEQPPDFCSAELSPCQHGSTCIPTSQGPRCE-CAPGYVGTNCSKDFDDCQDHRCQNNARC 123
Query: 164 VQLDDDQVVCSECPRGYGGE--KMSPGA 189
V D+ C GY G+ +M P A
Sbjct: 124 V--DEVNGYSCLCAEGYSGQLCEMPPHA 149
Score = 69 (29.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 7 CQDNTG---GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 47
CQ G G C CA G+ G + A CK+ C N G CV
Sbjct: 4 CQPQDGDRDGFRC-LCAAGFEGPSCRTASDPCKEHSCENGGSCV 46
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 17/58 (29%), Positives = 21/58 (36%)
Query: 4 RCICQDN-------TGGDNCER--CARGYYGNALEGAVTDCKQCPCPNQGP-CVQLDD 51
RC+C T D C+ C G G+ + GA CP G C Q D
Sbjct: 15 RCLCAAGFEGPSCRTASDPCKEHSCENG--GSCVAGATNYTCLCPAHYTGDFCEQPPD 70
>MGI|MGI:1919351 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1919351
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 EMBL:AL627123 InterPro:IPR013111
Pfam:PF07974 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:BC031402 EMBL:BC039980 EMBL:BC058571
IPI:IPI00676714 RefSeq:NP_001156449.1 UniGene:Mm.275216
ProteinModelPortal:Q80V70 SMR:Q80V70 STRING:Q80V70
PhosphoSite:Q80V70 PRIDE:Q80V70 Ensembl:ENSMUST00000030897
GeneID:230971 KEGG:mmu:230971 UCSC:uc008wbp.2 InParanoid:Q80V70
OrthoDB:EOG4CZBF1 ChiTaRS:MEGF6 NextBio:380326 Bgee:Q80V70
CleanEx:MM_MEGF6 Genevestigator:Q80V70
GermOnline:ENSMUSG00000057751 Uniprot:Q80V70
Length = 1572
Score = 140 (54.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 53/195 (27%), Positives = 77/195 (39%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPC-PNQGPCVQL---------DDD 52
C+C G++C C G +G + C+ C P G C+ L D
Sbjct: 760 CLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCDPETGTCLCLPGFVGSRCQDAC 819
Query: 53 QVSNLGNRTRIRIKSALGGN--RTRGLALTRQTHYQLTGYHHEPTSGGAFSRCV-PCNCN 109
G ++R A G+ G L+ SG C+ PCNC+
Sbjct: 820 PAGWFGTGCQMRCACANDGHCHPATGRCSCAPGWTGLS-CQRACDSGHWGPDCIHPCNCS 878
Query: 110 -GHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQLD 167
GH + CDA SG C+C+ G CE+ C +GY+G E ++C C + C D
Sbjct: 879 AGHGN-CDAVSGLCLCEAGYEGPQCEQWCRQGYFGPGCE------QKCRCEHGATC---D 928
Query: 168 DDQVVCSECPRGYGG 182
C+ CP G+ G
Sbjct: 929 HVSGACT-CPAGWRG 942
Score = 124 (48.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 57/196 (29%), Positives = 71/196 (36%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALE-------GAVTDCKQ--CPCPN--QGPCVQLDDD 52
CIC G +CER C + +G E G + C CP GP +
Sbjct: 1322 CICPPGKTGGHCERGCPQDRFGKGCEHKCACRNGGLCHATNGSCSCPLGWMGPHCE-HAC 1380
Query: 53 QVSNLGNRTRIRIKSALGGN--RTRGLALTRQTHYQLTGYHHEPTSGGAF--SRCVP-CN 107
G + G+ T G L Y G E T F S C C
Sbjct: 1381 PAGRYGAACLLECSCQNNGSCEPTSGACLCGPGFY---GQACEDTCPAGFHGSGCQRVCE 1437
Query: 108 CNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQL 166
C A CD SGRC+C G CER C G++G +G + +QC P PC
Sbjct: 1438 CQQGAP-CDPVSGRCLCPAGFRGQFCERGCKPGFFG---DGCL---QQCNSPTGVPC--- 1487
Query: 167 DDDQVVCSECPRGYGG 182
D +C CP G G
Sbjct: 1488 DPISGLCL-CPPGRAG 1502
Score = 119 (46.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 33/93 (35%), Positives = 39/93 (41%)
Query: 98 GAFSR-CV-PCNCNGHADICDAESGRCICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQ 154
G F + C PC C G C SG C+C G +C+ RC G YG C+Q
Sbjct: 1210 GTFGKDCEHPCQCPGETWACHPASGACVCAAGYHGTDCQQRCPSGRYGPG-------CEQ 1262
Query: 155 -CPCPNQGPCVQLDDDQVVCSECPRGYGGEKMS 186
C C N G C D C CP G+ G S
Sbjct: 1263 ICKCLNGGTC---DPATGACY-CPAGFLGADCS 1291
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 50/194 (25%), Positives = 69/194 (35%)
Query: 4 RCICQDNTGGDNC-ERCARGYYGNALE-------GAVTD--CKQCPCPNQGPCVQLDDDQ 53
+C C G C + C G YG + G D QC CP + +++
Sbjct: 1019 QCHCAPGWMGPTCLQACPAGLYGKNCQHSCLCRNGGSCDPILGQCTCPEGWTGLACENEC 1078
Query: 54 V-SNLGNRTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFS-RCVP-CNCNG 110
+ + G R+ GG R R P G F C C C
Sbjct: 1079 LPGHHGAGCRLNCSCLNGGTCDRLTGHCRCPAGWTGDKCQSPCVSGMFGVHCEEHCACRK 1138
Query: 111 HADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQ-CPCPNQGPCVQLDD 168
A C +G C+C G +CE+ C RG++G A C Q C CP C +
Sbjct: 1139 GAT-CHHVTGACLCPPGWRGSHCEQACPRGWFGEA-------CAQRCHCPPGASCHHVSG 1190
Query: 169 DQVVCSECPRGYGG 182
+ C CP G+ G
Sbjct: 1191 E---C-HCPPGFTG 1200
Score = 108 (43.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 28/78 (35%), Positives = 34/78 (43%)
Query: 106 CNCNGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCV 164
C C G CD SG CIC G +CER C + +G E +C C N G C
Sbjct: 1307 CTC-GQGAACDPVSGTCICPPGKTGGHCERGCPQDRFGKGCE------HKCACRNGGLCH 1359
Query: 165 QLDDDQVVCSECPRGYGG 182
+ CS CP G+ G
Sbjct: 1360 ATNGS---CS-CPLGWMG 1373
Score = 97 (39.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 30/86 (34%), Positives = 39/86 (45%)
Query: 106 CNC-NGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTDCK-QCPCPNQGP 162
C C NG + CD G+C C + G CE C G++G C+ C C N G
Sbjct: 1048 CLCRNGGS--CDPILGQCTCPEGWTGLACENECLPGHHG-------AGCRLNCSCLNGGT 1098
Query: 163 CVQLDDDQVVCSECPRGYGGEK-MSP 187
C +L C CP G+ G+K SP
Sbjct: 1099 CDRLTGH---C-RCPAGWTGDKCQSP 1120
Score = 90 (36.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 31/95 (32%), Positives = 41/95 (43%)
Query: 94 PTSGGAFSRCVPCNC-NGHADICDAESGRCICQDNTGGDNCER-CARGYYGNALEGAVTD 151
P GA R + C+C NG CD +G C C GD C+ C G +G E
Sbjct: 1080 PGHHGAGCR-LNCSCLNGGT--CDRLTGHCRCPAGWTGDKCQSPCVSGMFGVHCEEHCAC 1136
Query: 152 CKQCPCPN-QGPCVQLDDDQVV-CSE-CPRGYGGE 183
K C + G C+ + C + CPRG+ GE
Sbjct: 1137 RKGATCHHVTGACLCPPGWRGSHCEQACPRGWFGE 1171
Score = 88 (36.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 27/80 (33%), Positives = 34/80 (42%)
Query: 106 CNC-NGHADICDAESGRCICQDNTGGDNC-ERCARGYYGNALEGAVTDCKQ-CPCPNQGP 162
C C NG + CD G+C C G C + C G YG +C+ C C N G
Sbjct: 1005 CTCFNGAS--CDPVLGQCHCAPGWMGPTCLQACPAGLYGK-------NCQHSCLCRNGGS 1055
Query: 163 CVQLDDDQVVCSECPRGYGG 182
C D C+ CP G+ G
Sbjct: 1056 C---DPILGQCT-CPEGWTG 1071
Score = 74 (31.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 5 CICQDNTGGDNCER-CARGYYGNALEGAVTDCKQCPCPNQGPCVQL 49
C C G +CE C +G+YG K+C C N+G C +L
Sbjct: 585 CRCPPGVSGAHCEDGCPKGFYGKHCR------KKCHCANRGRCHRL 624
Score = 66 (28.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 5 CICQDNTGGDNCE-RCARGYYGNALEGAVTDCKQ-CPCPNQGPC 46
C+C G +C+ RC G YG C+Q C C N G C
Sbjct: 1236 CVCAAGYHGTDCQQRCPSGRYGPG-------CEQICKCLNGGTC 1272
Score = 50 (22.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 7 CQDNTGGDNCE---RCARGYYG-NALEGAV--------TDCKQ-CPCPNQGP-CVQL 49
CQ T G +CE +C + + GA TDC+Q CP GP C Q+
Sbjct: 1207 CQPGTFGKDCEHPCQCPGETWACHPASGACVCAAGYHGTDCQQRCPSGRYGPGCEQI 1263
Score = 44 (20.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGA---VTDCKQCPCPNQ 43
C + G C C RGY + + + DC PC Q
Sbjct: 348 CSHTSTGPLCT-CPRGYELDEDQKTCIDIDDCANSPCCQQ 386
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 10 NTGGDNCE---RCARGYYGNALEGA-VTDCKQCPCPNQGPCVQLDDDQ 53
NT G CE CA G+ G + + QC C G +LD+D+
Sbjct: 406 NTDGCGCEDVDECASGHSGCEHHCSNLAGSFQCFC-EAG--YRLDEDR 450
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 145 (56.1 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 46/179 (25%), Positives = 75/179 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ +T G C+ C GY+ ++ C C C +G S + ++T
Sbjct: 827 QCKCKPHTEGRRCDVCRDGYHSLDRSNSL-GCLPCQCDLRGTV------NGSGVCDKTT- 878
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGH-----ADICDAE 118
L N L R + + + +S A C PC C+ H A +CD
Sbjct: 879 --GQCLCKNNVESLRCNR-----CSAHTYNLSSANATHGCQPCYCD-HIGTVPATVCDPV 930
Query: 119 SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQL---DDDQVVCS 174
SG+CIC G +C C G++ + E +++C+ C C + G Q+ Q VC+
Sbjct: 931 SGQCICLPTRYGRDCGTCKPGFFLS--EAGLSECEVCECHSVGAMGQVCAAHSGQCVCA 987
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 48/186 (25%), Positives = 68/186 (36%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+C C+ G C+ C +Y G C C C G D V+ +
Sbjct: 777 QCECKAGVRGLLCDTCIPHFYSQNSSGV---CLPCNCSLNGSVPGTSCDAVTG-----QC 828
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNC------NGHADICDA 117
+ K G R + R GYH S C+PC C NG + +CD
Sbjct: 829 KCKPHTEGRRCD---VCRD------GYHSLDRSNSL--GCLPCQCDLRGTVNG-SGVCDK 876
Query: 118 ESGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQG--PCVQLDDDQVVCSE 175
+G+C+C++N C RC+ Y + A C+ C C + G P D C
Sbjct: 877 TTGQCLCKNNVESLRCNRCSAHTYNLSSANATHGCQPCYCDHIGTVPATVCDPVSGQCIC 936
Query: 176 CPRGYG 181
P YG
Sbjct: 937 LPTRYG 942
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 42/161 (26%), Positives = 67/161 (41%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRI 63
+CIC G +C C G++ + E +++C+ C C + G QV + +
Sbjct: 933 QCICLPTRYGRDCGTCKPGFFLS--EAGLSECEVCECHSVGAM-----GQVCAAHSGQCV 985
Query: 64 RIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCN---GHADICDAESG 120
+L G+R Q G++ P+ G RC PC C+ G C ++G
Sbjct: 986 CAHPSLTGHRCD------QCQDLFFGFN--PSVG----RCEPCGCDPVGGFNGTCHPQTG 1033
Query: 121 RCICQDNTGGDNCERCARGYY---GNALEGAVTDCKQCPCP 158
+C+C+ GD C+ C G N G D +Q P P
Sbjct: 1034 QCLCKPFVTGDKCDACVEGASFMDPNNYLGCSKDPQQQPPP 1074
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 44/177 (24%), Positives = 68/177 (38%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQGPCVQLDDDQVSNLGNRTR 62
+C C+ + G C +C G+Y L+ A+ D C+ C C G VQ D + G +
Sbjct: 673 QCKCKRHVSGRQCNQCQHGFY--KLQSALADGCRACNCNTAGT-VQPDITCHQDSG---Q 726
Query: 63 IRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI---CDAES 119
+ K+ GL R +Y +H G C+ C C+ + C+ +
Sbjct: 727 CQCKA-----NVIGLTCDR-CNYGFKFLNHTNPDG-----CISCGCDPWGSLHQFCNPFT 775
Query: 120 GRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSEC 176
G+C C+ G C+ C +Y G C C C G D V +C
Sbjct: 776 GQCECKAGVRGLLCDTCIPHFYSQNSSGV---CLPCNCSLNGSVPGTSCDAVT-GQC 828
Score = 120 (47.3 bits), Expect = 0.00058, P = 0.00058
Identities = 46/191 (24%), Positives = 67/191 (35%)
Query: 4 RCIC--QDNTGGDNCERCARGYYGNALEGA----VTDCKQCPCPNQGPCVQLDDDQVSNL 57
RC C + +T G NCERC + +C+ C C + +
Sbjct: 547 RCACLPESHTHGANCERCIPLFNDKPFRPGDQIQAFNCRPCQCYGHASSCHYNSSLDPHP 606
Query: 58 GNRTRIR--IKSALGGNRT-RGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADI 114
G R + N T R R Y+ G A C C C+ I
Sbjct: 607 GEHFRGGGGVCDDCTHNTTGRNCERCRSLFYREVG-----ALLWATDVCKACECHSAGTI 661
Query: 115 -----CDAESGRCICQDNTGGDNCERCARGYYGNALEGAVTD-CKQCPCPNQG---PCVQ 165
C+ G+C C+ + G C +C G+Y L+ A+ D C+ C C G P +
Sbjct: 662 NASLHCEPIGGQCKCKRHVSGRQCNQCQHGFY--KLQSALADGCRACNCNTAGTVQPDIT 719
Query: 166 LDDDQVVCSEC 176
D C +C
Sbjct: 720 CHQDSGQC-QC 729
>MGI|MGI:104659 [details] [associations]
symbol:Dll1 "delta-like 1 (Drosophila)" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=NAS] [GO:0001756 "somitogenesis" evidence=IGI] [GO:0001757
"somite specification" evidence=IMP] [GO:0001947 "heart looping"
evidence=IMP] [GO:0005112 "Notch binding" evidence=ISO;IPI]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0007154 "cell communication" evidence=IEA]
[GO:0007219 "Notch signaling pathway" evidence=ISO;TAS] [GO:0007267
"cell-cell signaling" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0007386 "compartment pattern
specification" evidence=IMP] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009912 "auditory receptor cell fate commitment"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IDA] [GO:0042472 "inner ear morphogenesis" evidence=NAS]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=NAS] [GO:0042491 "auditory receptor cell differentiation"
evidence=NAS] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045608 "negative regulation of
auditory receptor cell differentiation" evidence=IMP] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IDA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048839 "inner ear development" evidence=IMP] [GO:0050767
"regulation of neurogenesis" evidence=IMP] [GO:0061314 "Notch
signaling involved in heart development" evidence=IC] [GO:0070986
"left/right axis specification" evidence=IMP] Reactome:REACT_81380
InterPro:IPR000742 InterPro:IPR001774 InterPro:IPR001881
InterPro:IPR011651 InterPro:IPR018097 Pfam:PF00008 Pfam:PF01414
Pfam:PF07657 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51051
SMART:SM00051 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:104659 GO:GO:0016021 GO:GO:0005886 GO:GO:0001701
GO:GO:0045944 GO:GO:0031410 GO:GO:0005509 GO:GO:0007267
GO:GO:0045747 Reactome:REACT_115202 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0042472 PROSITE:PS01186 GO:GO:0042475
PROSITE:PS00010 GO:GO:0001947 GO:GO:0070986 GO:GO:0072014
GO:GO:0045638 EMBL:CH466630 GO:GO:0001757
GeneTree:ENSGT00690000101660 CTD:28514 eggNOG:NOG249767
HOGENOM:HOG000267024 HOVERGEN:HBG007139 KO:K06051 OMA:YCDQCIR
OrthoDB:EOG469QT9 GO:GO:0007386 GO:GO:0072070 GO:GO:0045608
GO:GO:0097150 EMBL:X80903 EMBL:AY497019 EMBL:BC057400 EMBL:BC065063
IPI:IPI00121340 PIR:I48324 RefSeq:NP_031891.2 UniGene:Mm.4875
ProteinModelPortal:Q61483 SMR:Q61483 DIP:DIP-32600N IntAct:Q61483
STRING:Q61483 PhosphoSite:Q61483 PRIDE:Q61483
Ensembl:ENSMUST00000014917 GeneID:13388 KEGG:mmu:13388
InParanoid:Q6PFV7 NextBio:283748 PMAP-CutDB:Q6PFV7 Bgee:Q61483
CleanEx:MM_DLL1 Genevestigator:Q61483 GermOnline:ENSMUSG00000014773
GO:GO:0009912 GO:GO:0061314 Uniprot:Q61483
Length = 722
Score = 127 (49.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 55/193 (28%), Positives = 73/193 (37%)
Query: 7 CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVSNLGNRTRIRIK 66
C D +C C G+YG E + C PC N G C D G T
Sbjct: 342 CTDLEDSFSCT-CPPGFYGKVCELSAMTCADGPCFNGGRCSDNPD------GGYT---CH 391
Query: 67 SALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVP------CNCN-GHA------D 113
LG + G ++ L G P S GA +CV C C G + +
Sbjct: 392 CPLGFS---GFNCEKKM--DLCG--SSPCSNGA--KCVDLGNSYLCRCQAGFSGRYCEDN 442
Query: 114 ICDAESGRCI----CQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDD 169
+ D S C C+D+ +C C GY G V+ C+ PC N C Q
Sbjct: 443 VDDCASSPCANGGTCRDSVNDFSCT-CPPGYTGKNCSAPVSRCEHAPCHNGATCHQRGQ- 500
Query: 170 QVVCSECPRGYGG 182
+ +C EC +GYGG
Sbjct: 501 RYMC-ECAQGYGG 512
Score = 114 (45.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 29/82 (35%), Positives = 35/82 (42%)
Query: 107 NCNGHADICDAE--SGRCICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCV 164
NC D+C + S C D C RC G+ G E V DC PC N G C
Sbjct: 400 NCEKKMDLCGSSPCSNGAKCVDLGNSYLC-RCQAGFSGRYCEDNVDDCASSPCANGGTCR 458
Query: 165 QLDDDQVVCSECPRGYGGEKMS 186
+D C+ CP GY G+ S
Sbjct: 459 DSVND-FSCT-CPPGYTGKNCS 478
Score = 102 (41.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 30/107 (28%), Positives = 38/107 (35%)
Query: 91 HHEPTSGGAFSR-----CVPCNCN-GHADI-CDAESGRCICQDNTGGDNCE--------R 135
HH+P GA C+C G+ C+ E C G +C
Sbjct: 293 HHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECAPSPCKNGASCTDLEDSFSCT 352
Query: 136 CARGYYGNALEGAVTDCKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C G+YG E + C PC N G C D C CP G+ G
Sbjct: 353 CPPGFYGKVCELSAMTCADGPCFNGGRCSDNPDGGYTC-HCPLGFSG 398
Score = 74 (31.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 10 NTG-GDNCERCARGYYGNALEGAVTDCKQCPCPNQGPCVQLDD 51
NTG G C GY G E V +C PC N C L+D
Sbjct: 305 NTGQGSYTCSCRPGYTGANCELEVDECAPSPCKNGASCTDLED 347
Score = 52 (23.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 5 CICQDNTGGDNCERCARGYYGNALEGAVTDCKQCPC 40
C C+ G C+ C R Y L G QC C
Sbjct: 242 CKCRVGWQGRYCDECIR--YPGCLHGTCQQPWQCNC 275
Score = 36 (17.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 4 RCICQDNTGGDNCER 18
+C CQ+ GG C +
Sbjct: 272 QCNCQEGWGGLFCNQ 286
>MGI|MGI:87961 [details] [associations]
symbol:Agrn "agrin" species:10090 "Mus musculus" [GO:0001932
"regulation of protein phosphorylation" evidence=ISO] [GO:0001934
"positive regulation of protein phosphorylation" evidence=IDA]
[GO:0002162 "dystroglycan binding" evidence=ISO] [GO:0005509
"calcium ion binding" evidence=ISO] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005615 "extracellular space" evidence=IDA;TAS] [GO:0007009
"plasma membrane organization" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=ISO] [GO:0007528 "neuromuscular junction
development" evidence=IGI] [GO:0008582 "regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0010469 "regulation of receptor
activity" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030548 "acetylcholine receptor regulator
activity" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0032314 "regulation of Rac GTPase activity"
evidence=IDA] [GO:0032321 "positive regulation of Rho GTPase
activity" evidence=ISO] [GO:0043113 "receptor clustering"
evidence=IGI;ISO;IMP;IDA] [GO:0043525 "positive regulation of
neuron apoptotic process" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=IDA] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=IMP] Reactome:REACT_112621
InterPro:IPR000742 InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181
SMART:SM00280 MGI:MGI:87961 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045887 GO:GO:0045944
GO:GO:0007009 GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605
GO:GO:0043113 PROSITE:PS01186 Reactome:REACT_118324 GO:GO:0033691
GO:GO:0002162 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0005796 GO:GO:0045213 GO:GO:0001934
InterPro:IPR011497 EMBL:AL928667 EMBL:BC150703 IPI:IPI00378698
IPI:IPI00648938 IPI:IPI00874558 UniGene:Mm.273098 PDB:3PVE
PDBsum:3PVE ProteinModelPortal:A2ASQ1 SMR:A2ASQ1 STRING:A2ASQ1
PaxDb:A2ASQ1 PRIDE:A2ASQ1 Ensembl:ENSMUST00000071248
Ensembl:ENSMUST00000075787 Ensembl:ENSMUST00000105574
Ensembl:ENSMUST00000105575 UCSC:uc008wgf.1
GeneTree:ENSGT00530000063501 InParanoid:A2ASQ1
Reactome:REACT_115433 ChiTaRS:AGRN EvolutionaryTrace:A2ASQ1
Bgee:A2ASQ1 Genevestigator:A2ASQ1 Uniprot:A2ASQ1
Length = 1950
Score = 134 (52.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 82 QTHYQLTGYHHEPTSGGAFSRCVP-CNCNGHADI---CDAESGRCICQDNTGGDNCERCA 137
QT Y + G + C C+CN H CD +G+C C+ GG C+RC
Sbjct: 663 QTPYGCCQDNVTAAQGVGLAGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDRCE 722
Query: 138 RGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDDQV--VCSECPRGYGGEK 184
G++ G VTD C C C +G V+ D +Q+ +CS C G G K
Sbjct: 723 PGFWN--FRGIVTDGHSGCTPCSCDPRG-AVRDDCEQMTGLCS-CRPGVAGPK 771
Score = 113 (44.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 49/173 (28%), Positives = 73/173 (42%)
Query: 4 RCICQDNTGGDNCERCARGYYGNALEGAVTD----CKQCPCPNQGPCVQLDDDQVSNLGN 59
+C C+ GG C+RC G++ G VTD C C C +G V+ D +Q++ L +
Sbjct: 706 QCSCRPGVGGLRCDRCEPGFWN--FRGIVTDGHSGCTPCSCDPRG-AVRDDCEQMTGLCS 762
Query: 60 RTRIRIKSALGGNRTRGLALTRQTHYQLTGYHHEPTSGGAFSRCVPCNCNGHADICDAES 119
R + G G AL H G +PT+ CV +C A C E+
Sbjct: 763 -CRPGVAGPKCGQCPDGQALG---HL---GCEADPTTPVT---CVEMHCEFGAS-CVEEA 811
Query: 120 G--RCICQDNT--GGDNCERCAR-GY-YGNALEGAVTDCKQ---CPCPNQGPC 163
G +C+C T ++ + C G YGN + C+Q + GPC
Sbjct: 812 GFAQCVCPTLTCPEANSTKVCGSDGVTYGNECQLKTIACRQRLDISIQSLGPC 864
Score = 51 (23.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 16 CERCARGYYGNALEGAVTDCKQCPCPNQGPCVQ 48
C+RC + +G+ E + +C CP++ CV+
Sbjct: 429 CDRCGQCRFGSLCE---VETGRCVCPSE--CVE 456
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 152 CKQCPCPNQGPCVQLDDDQVVCSECPRGYGG 182
C PC + G C LD + C G G
Sbjct: 1215 CDSQPCLHGGTCQDLDSGKGFSCSCTAGRAG 1245
Score = 45 (20.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 156 PCPNQGPCVQLDDDQVVCSECPRGYGG 182
PC N G C+ + C CP G+ G
Sbjct: 1711 PCLNGGSCIPREATYE-CL-CPGGFSG 1735
Score = 39 (18.8 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 30 GAVTDCKQCPCP 41
GAV QC CP
Sbjct: 505 GAVCSAGQCVCP 516
WARNING: HSPs involving 227 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.476 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 190 0.00091 110 3 12 22 0.46 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 477
No. of states in DFA: 529 (56 KB)
Total size of DFA: 138 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.31u 0.08s 15.39t Elapsed: 00:00:03
Total cpu time: 15.49u 0.09s 15.58t Elapsed: 00:00:03
Start: Thu Aug 15 12:41:03 2013 End: Thu Aug 15 12:41:06 2013
WARNINGS ISSUED: 2