BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15475
(204 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2 SV=2
Length = 1639
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 115/160 (71%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG+CLKCI+NT G CD CL G+FGD LALP G C+ C CY GT + E CDQ+T
Sbjct: 864 TTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 923
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC CKP+V+G +C +C+ G++NI SG GC++C CDPVGS N TCD +GQC CRPGV G
Sbjct: 924 GQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMG 983
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
RC+ C+ YGFS +GCKPC CD GS QCD +GQCP
Sbjct: 984 QRCDQCENYFYGFSSEGCKPCECDESGSKGFQCDQNGQCP 1023
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
+C +NT GP CD CLP Y + + + +C+ C C G + F TG
Sbjct: 323 ECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNC--NGLADKCFFDANLFNRTGH 380
Query: 92 ----CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C+ + G NC++C+ Y G C +C CDPVGS + C+ G+C C+PGV
Sbjct: 381 GGHCLDCRENRDGPNCERCKENFYMRDDGY-CVNCACDPVGSRSLQCNS-HGKCQCKPGV 438
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSN 178
TG +C+ C N+Y F GC+ C CD GS+
Sbjct: 439 TGDKCDRCDNNYYQFGPHGCQQCGCDSGGSH 469
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 99/236 (41%), Gaps = 78/236 (33%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTPVCDQLT 89
TG C+ C +NT G CD C G++G+AL DC+ C C G L+ T +C +
Sbjct: 757 TGRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTE-- 813
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDC----DP--VGSLNRTC---- 134
C G+ C+QC G + +G + CKSCDC DP VG+ NRT
Sbjct: 814 ----CPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECL 869
Query: 135 --------------------DP------------------------------ITGQCLCR 144
DP +TGQC C+
Sbjct: 870 KCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCK 929
Query: 145 PGVTGTRCELCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFMNR 195
P V G C CQP ++ S +GC+ C+CDP+GS + CD SGQC PGV R
Sbjct: 930 PNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQR 985
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L + G G CL C N GP C+ C ++ G C C C G+ +
Sbjct: 374 LFNRTGHGGHCLDCRENRDGPNCERCKENFY----MRDDGYCVNCACDPVGSRSLQ---- 425
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT--CDPITGQC 141
C+ G+C CKP V G CD+C+ +Y GC+ C CD GS T CD TG C
Sbjct: 426 -CNS-HGKCQCKPGVTGDKCDRCDNNYYQF-GPHGCQQCGCDSGGSHQNTPACDTETGIC 482
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G RC C+P + + GC PC C
Sbjct: 483 FCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFC 516
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 23/120 (19%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG--------CKSCDCDPVGS--------LNRTCD 135
C C+ + G +CD+C + YN + + CK+C+C+ + NRT
Sbjct: 322 CECRHNTDGPDCDRC-LPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTGH 380
Query: 136 PITGQCL-CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC---PGV 191
G CL CR G CE C+ N Y C C CDP+GS SLQC+ G+C PGV
Sbjct: 381 G--GHCLDCRENRDGPNCERCKENFYMRDDGYCVNCACDPVGSRSLQCNSHGKCQCKPGV 438
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 60/141 (42%), Gaps = 18/141 (12%)
Query: 43 GPQCDTCLPGYFGD-ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C++C PGY A P C PC C+ +CD TG+C C+ + G
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCH--------GHADICDSETGRCICQHNTHGD 769
Query: 102 NCDQCEVGHY-NIISG--EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPN 158
NCDQC G Y N + G CK C C G+ + + C G G+RCE C
Sbjct: 770 NCDQCAKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCEQCSDG 829
Query: 159 HYGF------SLDGCKPCMCD 173
+G + CK C C+
Sbjct: 830 FFGDPTGLLGEVQTCKSCDCN 850
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPG 146
QC+C +G C+ C G+ + + G C CDC + CD TG+C+C+
Sbjct: 709 QCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHN 765
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPC------MCDPIGSNSLQCDPSGQCP-GVFMNR 195
G C+ C YG +L G CK C C I +++ C +CP G F +R
Sbjct: 766 THGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVIC---TECPKGYFGSR 822
Query: 196 AEMSSD 201
E SD
Sbjct: 823 CEQCSD 828
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 176 bits (447), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE-TETFTPV-CDQL 88
TG+C KCI+NT G C+ C PGY+GDAL PKG+C+ C C+ GT +T + C+Q
Sbjct: 853 TGECKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECNQQ 912
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
GQC C P+V+G CDQC G YNI SG GC+ C+CDP+GS TCD TGQC C+PGVT
Sbjct: 913 DGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNTCDVNTGQCQCKPGVT 972
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
G RC+ C H+GFS +GC+PC C+ IGS + QCD SGQC
Sbjct: 973 GQRCDRCADYHFGFSANGCQPCDCEYIGSENQQCDVNSGQC 1013
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPC-------QCYIPG 74
SV G +C +NT G C+ CLP Y + ++ +C C +CY
Sbjct: 301 SVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGTSVEANECIACNCSQLSNRCYFDQ 360
Query: 75 TLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
L ET G C C+ + G +C+QC H+ C +C C+ +GSL+
Sbjct: 361 QLFEETGHG------GHCIDCQGNTQGVHCEQCIANHWRRPGENYCVACGCNEIGSLSTQ 414
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
CD G+C C+PGVTG C+ C Y FS +GCK C C+ GS
Sbjct: 415 CDN-EGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGS 457
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L G G C+ C NT G C+ C+ ++ + C C C G+L T+
Sbjct: 362 LFEETGHGGHCIDCQGNTQGVHCEQCIANHWRRP---GENYCVACGCNEIGSLSTQ---- 414
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNR--TCDPITGQC 141
CD G+C CKP V G CDQC G Y+ S GCK+C C+ GSLN CD +G C
Sbjct: 415 -CDN-EGKCQCKPGVTGRFCDQCLDGFYD-FSTNGCKNCGCETSGSLNNQPRCDSSSGSC 471
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G +C+ C+P ++ S + GC PC C
Sbjct: 472 SCKLNVEGRQCDKCKPGYFDLSTENQFGCTPCFC 505
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
+G C+ C +NT G C+ C GY+GDAL + DC+ C C G P
Sbjct: 747 AESGSCI-CEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDG--------PCILHA 797
Query: 89 TGQCSCKP---HVVGTNCDQCEVGHY-NIISGEGCKSCDC----DPVGSLNRTCDPITGQ 140
G C G CD+C G++ N G C C C DP N CD ITG+
Sbjct: 798 DGDVICTECPNGYTGRRCDECSDGYFGNPKDGTECVECACSGNTDPNSIGN--CDKITGE 855
Query: 141 C-LCRPGVTGTRCELCQPNHYGFSL----DGCKPCMCDPIGS 177
C C G CE C+P ++G +L C+ C C G+
Sbjct: 856 CKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAAGT 897
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPG 146
C C P VG C+ CE G G C CDC + + +C+ +G C+C
Sbjct: 701 HCECLPGFVGQFCESCESGFRRETKFGGPFNHCIKCDCH---NHSNSCEAESGSCICEHN 757
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC 172
G CE C +YG +L G C+ C C
Sbjct: 758 TAGDTCERCARGYYGDALQGTEEDCQKCPC 787
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 116/172 (67%), Gaps = 7/172 (4%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVCDQLT 89
+G+CLKCIYNT G CD C G++GDA A D C+PC+C GT++ +T C Q+T
Sbjct: 830 SGECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQT---ACSQVT 886
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV+ +C CE+G YN+ SG+GC+ C+C+P+GS N CD ++GQC C+PGVTG
Sbjct: 887 GQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTG 946
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC---PGVFMNRAEM 198
CE C+ N +GFS GCKPC CDP GS S QC G+C PG +R +M
Sbjct: 947 QHCERCEVNFFGFSSSGCKPCDCDPEGSESAQCKEDGRCHCRPGFVGSRCDM 998
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 37 CIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ- 91
C +NT G C+ C P Y + A A +C PC C G F P + TG
Sbjct: 291 CKHNTEGADCNVCKPFYNDRPWRRATAENPNECLPCNC--NGKSAECYFDPELYRATGHG 348
Query: 92 ---CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
+C + G C++C +Y SG+ C SC C+PVGSL+ CD TG+C C+PGV
Sbjct: 349 GHCRNCADNTDGPKCERCLANYYREASGQRCLSCGCNPVGSLSTQCDN-TGRCSCKPGVM 407
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
G +C+ CQP ++ S GC+PC C+P GS + +CD +G+C
Sbjct: 408 GDKCDRCQPGYHSLSEAGCRPCSCNPAGS-TQECDVQTGRC 447
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 83/154 (53%), Gaps = 18/154 (11%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L G G C C NT GP+C+ CL Y+ +A C C C G+L T+
Sbjct: 341 LYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQR---CLSCGCNPVGSLSTQ---- 393
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD TG+CSCKP V+G CD+C+ G Y+ +S GC+ C C+P GS + CD TG+C C
Sbjct: 394 -CDN-TGRCSCKPGVMGDKCDRCQPG-YHSLSEAGCRPCSCNPAGST-QECDVQTGRCQC 449
Query: 144 RPGVTGTRCELCQPNHYGFSLD-----GCKPCMC 172
+ V G C+ C+ + F+LD GC PC C
Sbjct: 450 KENVDGFNCDRCKLGY--FNLDPQNPQGCTPCFC 481
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 43 GPQCDTCLPGYFGDALALPK-GDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C+ C G+ L + CE C C + CD TG C+C+ + G
Sbjct: 682 GQHCEQCDQGFRRSRPELRRFSTCERCNC--------NGHSDTCDPETGMCNCQHNTAGL 733
Query: 102 NCDQCEVGHY---NIISGEGCKSCDCDPVGSLNRTCD--PITGQCLCR---PGVTGTRCE 153
+C++C+ G Y + S CK+C C P G+ TC P T + +C G TG RCE
Sbjct: 734 SCERCKDGFYGDSTVGSSSDCKACPC-PAGA---TCAVVPKTNEVVCTNCPTGTTGKRCE 789
Query: 154 LCQPNHYGFSL------DGCKPCMCD 173
LC +G L C+ C C+
Sbjct: 790 LCDDGFFGDPLGEKGPVRACRACSCN 815
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYN----IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
+ +C+C +G +C+QC+ G + C+ C+C+ TCDP TG C
Sbjct: 669 RWVEKCTCPQGYLGQHCEQCDQGFRRSRPELRRFSTCERCNCNGHSD---TCDPETGMCN 725
Query: 143 CRPGVTGTRCELCQPNHYGFSLDG----CKPCMCDPIGS 177
C+ G CE C+ YG S G CK C C P G+
Sbjct: 726 CQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPC-PAGA 763
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G C+ C +FG C+PC C G+ + C + G+C C+P VG+
Sbjct: 946 GQHCERCEVNFFG----FSSSGCKPCDCDPEGSESAQ-----CKE-DGRCHCRPGFVGSR 995
Query: 103 CDQCEVGHYNIISGEGCKSC 122
CD CE ++ S GC+ C
Sbjct: 996 CDMCEENYFYNRSTPGCQQC 1015
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 107/159 (67%), Gaps = 4/159 (2%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNTGG CD C G++G+ LA P C C C GT++ ++ C+Q+T
Sbjct: 829 TGECLKCIYNTGGFYCDRCRDGFYGNPLAQNPDLKCRACSCNPYGTVKGQS---GCNQVT 885
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV +C CE G YN++SG GC+ CDC +GS + CD TGQC C PG++G
Sbjct: 886 GQCECLPHVTERDCSACEPGFYNLLSGRGCERCDCHSLGSTSGQCDVRTGQCECHPGISG 945
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+C+ C+PNH+GF +GCKPC CDP GS SLQC G+C
Sbjct: 946 QQCQQCEPNHFGFGPEGCKPCDCDPEGSGSLQCKEDGRC 984
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 37 CIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ- 91
C +NT G C+ CLP Y + + A +C PC C G + F P + TG
Sbjct: 290 CKHNTFGSDCEKCLPFYNDRPWRRSTADSPNECLPCNC--NGRSQECYFDPELYRSTGHG 347
Query: 92 ---CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C + G NC++C +Y + E C +C C+PVGSL+ CD G+C C+PGV
Sbjct: 348 GHCTGCADNTDGPNCERCRENYYRQDNNEPCHACQCNPVGSLSTQCDNY-GRCSCKPGVM 406
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G +C+ CQP + + GC+PC C+P GS
Sbjct: 407 GEKCDRCQPGFHSLTEAGCRPCACNPAGS 435
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L G G C C NT GP C+ C Y+ P C CQC G+L T+
Sbjct: 340 LYRSTGHGGHCTGCADNTDGPNCERCRENYYRQDNNEP---CHACQCNPVGSLSTQ---- 392
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD G+CSCKP V+G CD+C+ G +++ GC+ C C+P GS + C+ TG+C C
Sbjct: 393 -CDNY-GRCSCKPGVMGEKCDRCQPGFHSLTEA-GCRPCACNPAGSTDE-CNVETGRCSC 448
Query: 144 RPGVTGTRCELCQPNHYGFSLD-----GCKPCMC 172
+ V G CE C+P F LD GC PC C
Sbjct: 449 KDNVEGFNCERCKPGF--FHLDEANPRGCTPCFC 480
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C G QC C P +FG P+G C+PC C G+ + C + G
Sbjct: 934 TGQC-ECHPGISGQQCQQCEPNHFGFG---PEG-CKPCDCDPEGSGSLQ-----CKE-DG 982
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
+C CK VGT CDQCE ++ SG GC+ C
Sbjct: 983 RCECKSGFVGTRCDQCEENYFYNRSGPGCQEC 1014
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 32/145 (22%)
Query: 43 GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C+ C PGY + + P C C C + CD +G C C+ + G
Sbjct: 681 GQFCERCAPGYRRENPSQGPYSPCVLCTC--------NGHSDTCDPESGVCDCQHNTAGP 732
Query: 102 NCDQCEVGHY---NIISGEGCKSCDCDPVGSLNRTCD--PITGQCLCRP---GVTGTRCE 153
+C++C G+Y S C+ C C P GS +C P T + +C G TG RCE
Sbjct: 733 HCERCSEGYYGDSTTGSASDCQPCPC-PGGS---SCAVVPRTKEVVCTNCPLGTTGKRCE 788
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSN 178
LC ++G DP+G N
Sbjct: 789 LCDDGYFG-----------DPLGEN 802
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
CSC +G C++C G+ +G C C C+ + TCDP +G C C+
Sbjct: 673 CSCPTGYIGQFCERCAPGYRRENPSQGPYSPCVLCTCN---GHSDTCDPESGVCDCQHNT 729
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMCDPIGSN 178
G CE C +YG S G C+PC C P GS+
Sbjct: 730 AGPHCERCSEGYYGDSTTGSASDCQPCPC-PGGSS 763
Score = 37.0 bits (84), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 22/121 (18%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN--------IISGEGCKSCDCDPVG-------SLNRTCDP 136
C+CK + G++C++C + YN S C C+C+ L R+
Sbjct: 288 CNCKHNTFGSDCEKC-LPFYNDRPWRRSTADSPNECLPCNCNGRSQECYFDPELYRSTGH 346
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDPSGQC---PGV 191
G C C G CE C+ N+Y + + C C C+P+GS S QCD G+C PGV
Sbjct: 347 -GGHCTGCADNTDGPNCERCRENYYRQDNNEPCHACQCNPVGSLSTQCDNYGRCSCKPGV 405
Query: 192 F 192
Sbjct: 406 M 406
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 163 bits (413), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 106/159 (66%), Gaps = 4/159 (2%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C+ C C + GT++ ++ C+ +T
Sbjct: 846 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQS---SCNPVT 902
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G YN+ SG+GC+ CDC +GS N CD TGQC C+PG+TG
Sbjct: 903 GQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITG 962
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
CE C+ NH+GF +GCKPC C P GS SLQC G+C
Sbjct: 963 QHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRC 1001
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 37 CIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C +NT G C+ CLP +F D A A +C PC C G + F P + TG
Sbjct: 307 CKHNTYGVDCEKCLP-FFNDRPWRRATAESASECLPCDC--NGRSQECYFDPELYRSTGH 363
Query: 92 ----CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+C+ + G +C++C + + + E C SC C PVGSL+ CD G+C C+PGV
Sbjct: 364 GGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCSPVGSLSTQCDSY-GRCSCKPGV 422
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G +C+ CQP + + GC+PC CDP GS
Sbjct: 423 MGDKCDRCQPGFHSLTEAGCRPCSCDPSGS 452
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYF--GDALALPKGDCEPCQCYIPGTLETETF 81
L G G C C NT G C+ C +F G+ A C C C G+L T+
Sbjct: 357 LYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEA-----CSSCHCSPVGSLSTQ-- 409
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
CD G+CSCKP V+G CD+C+ G +++ GC+ C CDP GS++ C+ TG+C
Sbjct: 410 ---CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDPSGSIDE-CNIETGRC 463
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
+C+ V G CE C+P + GC PC C
Sbjct: 464 VCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC 497
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 62/144 (43%), Gaps = 28/144 (19%)
Query: 42 GGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
GG C+ CL GY + L P C C C G ET CD TG C+C+ + G
Sbjct: 697 GGQFCEMCLSGYRRETPNLGPYSPCVLCAC--NGHSET------CDPETGVCNCRDNTAG 748
Query: 101 TNCDQCEVGHYNIISGEGCKSCDCDP---VGSLNRTCDPITGQCLCR---PGVTGTRCEL 154
+C++C G+Y S DC P G + P T + +C G TG RCEL
Sbjct: 749 PHCEKCSDGYYG--DSTAGTSSDCQPCPCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCEL 806
Query: 155 CQPNHYGFSLDGCKPCMCDPIGSN 178
C ++G DP+G N
Sbjct: 807 CDDGYFG-----------DPLGRN 819
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C G C+ C +FG P+G C+PC C+ G+L + + G
Sbjct: 951 TGQC-ECQPGITGQHCERCEVNHFGFG---PEG-CKPCDCHPEGSLSLQC------KDDG 999
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
+C C+ VG CDQCE ++ S GC+ C
Sbjct: 1000 RCECREGFVGNRCDQCEENYFYNRSWPGCQEC 1031
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 105/159 (66%), Gaps = 4/159 (2%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C+ C C GT++ ++ C+ +T
Sbjct: 844 TGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQS---SCNPVT 900
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G+YN+ SG+GC+ CDC +GS N CD TGQC C+PG+TG
Sbjct: 901 GQCQCLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITG 960
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
CE C+ NH+GF +GCKPC C GS SLQC G+C
Sbjct: 961 QHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDDGRC 999
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 37 CIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C +NT G C+ CLP +F D A A + PC C G + F P + TG
Sbjct: 305 CKHNTYGVDCEKCLP-FFNDRPWRRATAESASESLPCDC--NGRSQECYFDPELYRSTGH 361
Query: 92 ----CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+C+ + G C++C + + + E C C C PVGSL+ CD G+C C+PGV
Sbjct: 362 GGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSPVGSLSTQCDSY-GRCSCKPGV 420
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G +C+ CQP + + GC+PC CD GS
Sbjct: 421 MGDKCDRCQPGFHSLTEAGCRPCSCDLRGS 450
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYF--GDALALPKGDCEPCQCYIPGTLETETF 81
L G G C C NT G +C+ C +F G+ A C PC C G+L T+
Sbjct: 355 LYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEA-----CSPCHCSPVGSLSTQ-- 407
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
CD G+CSCKP V+G CD+C+ G +++ GC+ C CD GS + C+ TG+C
Sbjct: 408 ---CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDLRGSTDE-CNVETGRC 461
Query: 142 LCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
+C+ V G CE C+P + GC PC C
Sbjct: 462 VCKDNVEGFNCERCKPGFFNLESSNPKGCTPCFC 495
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 74/155 (47%), Gaps = 28/155 (18%)
Query: 42 GGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
GG C+TCLPGY + +L P C C C G ET CD TG C C+ + G
Sbjct: 695 GGQFCETCLPGYRRETPSLGPYSPCVLCTC--NGHSET------CDPETGVCDCRDNTAG 746
Query: 101 TNCDQCEVGHY---NIISGEGCKSCDCDPVGSLNRTCD--PITGQCLCR---PGVTGTRC 152
+C++C G+Y + + C+ C C P GS +C P T + +C G G RC
Sbjct: 747 PHCEKCSDGYYGDSTLGTSSDCQPCPC-PGGS---SCAIVPKTKEVVCTHCPTGTAGKRC 802
Query: 153 ELCQPNHYGFSLDG------CKPCMC-DPIGSNSL 180
ELC ++G L C+PC C D I N++
Sbjct: 803 ELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAV 837
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C G C+ C +FG P+G C+PC C+ G+L + + G
Sbjct: 949 TGQC-ECQPGITGQHCERCETNHFGFG---PEG-CKPCDCHHEGSLSLQC------KDDG 997
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
+C C+ VG CDQCE ++ S GC+ C
Sbjct: 998 RCECREGFVGNRCDQCEENYFYNRSWPGCQEC 1029
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 149 bits (377), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 5/159 (3%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G CL+C+YNT G C+ C G++G A+A P C PC C + G++ +T PV T
Sbjct: 840 SGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPV----T 895
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C P+V G +C +C G Y++ SG GC+SC C P+GSL C P TGQC CRPGVTG
Sbjct: 896 GQCVCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLENKCHPKTGQCPCRPGVTG 955
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C+ CQ +GFS+ GC+ C C P+G+ S QC + C
Sbjct: 956 QACDRCQLGFFGFSIKGCRDCRCSPLGAASSQCHENSTC 994
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
+C +NT G C+ CLP + + A +C PC C G E TF + TG
Sbjct: 300 RCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNC--SGHSEECTFDRELYRSTGH 357
Query: 92 ----CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C+ H G +C++CE +Y C+ CDC P GSL+ CD +G C C+P V
Sbjct: 358 GGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCHPAGSLSLQCDN-SGVCPCKPTV 416
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
TG +C+ C P + S GC+PC C+ GS CDP SG CP
Sbjct: 417 TGWKCDRCLPGFHSLSEGGCRPCACNVAGSLGT-CDPRSGNCP 458
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L G G C +C +T GP C+ C Y+ + PK C+PC C+ G+L +
Sbjct: 351 LYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWS---PKTPCQPCDCHPAGSLSLQ---- 403
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD +G C CKP V G CD+C G +++ G GC+ C C+ GSL TCDP +G C C
Sbjct: 404 -CDN-SGVCPCKPTVTGWKCDRCLPGFHSLSEG-GCRPCACNVAGSLG-TCDPRSGNCPC 459
Query: 144 RPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
+ V G+ C+ C+P + GC C C
Sbjct: 460 KENVEGSLCDRCRPGTFNLQPHNPVGCSSCFC 491
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 95/222 (42%), Gaps = 65/222 (29%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ-- 87
TG CL C ++T GP C+ C+PG++G+A + DC+PC C PG T D
Sbjct: 730 NTGICL-CGHHTEGPSCERCMPGFYGNAFSGRADDCQPCPC--PGQSACATIPESGDVVC 786
Query: 88 -------------------------LTG--------QCS----------CKPH------- 97
L+G QCS C PH
Sbjct: 787 THCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCLRC 846
Query: 98 ---VVGTNCDQCEVGHYNIISG----EGCKSCDCDPVGSLN-RTCDPITGQCLCRPGVTG 149
G +C+ C G Y + C C CD GS++ +TC+P+TGQC+C P V+G
Sbjct: 847 LYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQCVCLPYVSG 906
Query: 150 TRCELCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
C C P Y S GC+ C C P+GS +C P +GQCP
Sbjct: 907 RDCSRCSPGFYDLQSGRGCQSCKCHPLGSLENKCHPKTGQCP 948
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 90/251 (35%), Gaps = 79/251 (31%)
Query: 7 HVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA-LALPKGDC 65
V + ++ L P L A CL C G C+ C GY + P +C
Sbjct: 658 QVLLCEVQLTSAWPQRELAPPASWVETCL-CPQGYTGQFCEFCALGYKREIPHGGPYANC 716
Query: 66 EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEG------ 118
PC C GT CD TG C C H G +C++C G Y N SG
Sbjct: 717 IPCTCNQHGT---------CDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGRADDCQPC 767
Query: 119 ------------------------------CKSCD----CDPVG---------------- 128
C+SC+ DP+G
Sbjct: 768 PCPGQSACATIPESGDVVCTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGN 827
Query: 129 -SLNR--TCDPITGQCL-CRPGVTGTRCELCQPNHYGFS-----LDGCKPCMCDPIGSNS 179
LN CDP +G CL C TG CE C+ YG + +D C PC CD GS S
Sbjct: 828 VDLNAVGNCDPHSGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVS 887
Query: 180 LQ-CDP-SGQC 188
+ C+P +GQC
Sbjct: 888 EKTCNPVTGQC 898
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C G CD C G+FG ++ KG C C+C G ++ C +
Sbjct: 944 TGQC-PCRPGVTGQACDRCQLGFFGFSI---KG-CRDCRCSPLGAASSQ-----CHE-NS 992
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
C C+P VG CD+C+ + GC+ C
Sbjct: 993 TCVCRPGFVGYKCDRCQDNFFLADGDTGCQEC 1024
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G CL+C++NT G C+ C G++G ALA P C PC C+ G++ + CD +T
Sbjct: 828 SGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQM---PCDPVT 884
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQCSC PHV +C +C G +++ G GC+SC C P+GS C P TGQC CRPGVTG
Sbjct: 885 GQCSCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQEDQCHPKTGQCTCRPGVTG 944
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C+ CQ +GFS+ GC+ C C P+G+ S QC +G C
Sbjct: 945 QACDRCQLGFFGFSIKGCRACRCSPLGAASAQCHENGTC 983
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 3 LDVHHVSVMDILL-----CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY---- 53
L ++ +V D + C G S+ VAG +C +NT G C+ CLP +
Sbjct: 255 LQSYYYAVSDFSVGGRCKCNGHASECGPDVAGQLA--CRCQHNTTGTDCERCLPFFQDRP 312
Query: 54 FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ----CSCKPHVVGTNCDQCEVG 109
+ A +C PC C G E TF + TG C+ H G +C++C+
Sbjct: 313 WARGTAEAAHECLPCNC--SGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQEN 370
Query: 110 HYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP 169
Y+ C+ CDC GSL+ CD TG C C+P VTG +C+ C P + S GC+P
Sbjct: 371 FYHWDPRMPCQPCDCQSAGSLHLQCDD-TGTCACKPTVTGWKCDRCLPGFHSLSEGGCRP 429
Query: 170 CMCDPIGSNSLQCDP-SGQCP 189
C C+P GS CDP SG+CP
Sbjct: 430 CTCNPAGSLDT-CDPRSGRCP 449
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 22 DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETF 81
++ +S G G C C +T GP C+ C ++ +P C+PC C G+L +
Sbjct: 341 ELFRST-GHGGRCHHCRDHTAGPHCERCQENFYHWDPRMP---CQPCDCQSAGSLHLQ-- 394
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
CD TG C+CKP V G CD+C G +++ G GC+ C C+P GSL+ TCDP +G+C
Sbjct: 395 ---CDD-TGTCACKPTVTGWKCDRCLPGFHSLSEG-GCRPCTCNPAGSLD-TCDPRSGRC 448
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G C+ C+P + GC C C
Sbjct: 449 PCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFC 482
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 94/226 (41%), Gaps = 65/226 (28%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-------YIPGTLETE-TF 81
TG C+ C ++T GP C+ CLPG++G+ A DC+PC C IP + E T
Sbjct: 718 NTGICV-CSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPCPGQSACTTIPESREVVCTH 776
Query: 82 TP---------VCDQ-----------------------------------LTGQC-SCKP 96
P VCD L+G C C
Sbjct: 777 CPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHCLRCLH 836
Query: 97 HVVGTNCDQCEVGHYNII----SGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPGVTGT 150
+ G +C+ C+ G Y + C C C P GS++ CDP+TGQC C P VT
Sbjct: 837 NTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSCLPHVTAR 896
Query: 151 RCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
C C P + GC+ C C P+GS QC P +GQC PGV
Sbjct: 897 DCSRCYPGFFDLQPGRGCRSCKCHPLGSQEDQCHPKTGQCTCRPGV 942
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 82/219 (37%), Gaps = 85/219 (38%)
Query: 43 GPQCDTCLPGYFGDALALPKG----DCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHV 98
G C++C PGY + +P+G C PC C GT CD TG C C H
Sbjct: 681 GQFCESCAPGYKRE---MPQGGPYASCVPCTCNQHGT---------CDPNTGICVCSHHT 728
Query: 99 VGTNCDQCEVGHY-NIISGEG--CKSCDC------------------------------- 124
G +C++C G Y N +G+ C+ C C
Sbjct: 729 EGPSCERCLPGFYGNPFAGQADDCQPCPCPGQSACTTIPESREVVCTHCPPGQRGRRCEV 788
Query: 125 -------DPVGSLNR-------------------TCDPITGQCL-CRPGVTGTRCELCQP 157
DP+G CDP++G CL C TG CE CQ
Sbjct: 789 CDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHCLRCLHNTTGDHCEHCQE 848
Query: 158 NHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
YG +L D C PC C P GS S Q CDP +GQC
Sbjct: 849 GFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQC 887
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
CSC G C+ C G+ + G C C C+ G TCDP TG C+C
Sbjct: 673 CSCPTGYTGQFCESCAPGYKREMPQGGPYASCVPCTCNQHG----TCDPNTGICVCSHHT 728
Query: 148 TGTRCELCQPNHYGFSL----DGCKPCMC 172
G CE C P YG D C+PC C
Sbjct: 729 EGPSCERCLPGFYGNPFAGQADDCQPCPC 757
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1 SV=4
Length = 1788
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 6/153 (3%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CLKC+Y T G C+ C G+FGDAL + +C+ C+C GT T CD+ TG
Sbjct: 1009 TGACLKCLYQTTGDHCELCKDGFFGDAL---QQNCQQCECDFLGTNNT---IAHCDRFTG 1062
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P+V G CDQC H+ I SGEGC+SC+CDP+G+L+ C+ TGQC C+PG G
Sbjct: 1063 QCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGR 1122
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
C CQ +++G + C+PC CD G+ QCD
Sbjct: 1123 ACNQCQAHYWGNPNEKCQPCECDQFGAADFQCD 1155
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 92/177 (51%), Gaps = 28/177 (15%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD------CEPCQCYIPGTLETETFTPVC 85
G C C++NT G C+ C+P ++ D P+ D C+PC C G+ + +C
Sbjct: 380 GVCDNCLHNTRGQHCEECMPYFYRD----PEQDITSERVCQPCDCDPQGSSDD----GIC 431
Query: 86 DQLT--------GQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT-C 134
D L G C CK V G C+QC+ G++N+ S EGC+ C C+P+G+LN + C
Sbjct: 432 DSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNSGC 491
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
TG+C C+ VTG C C P YG S +GC C CD GS CD SGQC
Sbjct: 492 VMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQC 548
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
T + + VC+ G C CKP+VVG CDQC G Y EGCK+CDC+ +GS ++ CD I
Sbjct: 794 TGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGF-GPEGCKACDCNSIGSKDKYCDLI 852
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
TGQC C P G C CQP ++ F C+ C C+ ++ CDP
Sbjct: 853 TGQCQCVPNTYGRECNQCQPGYWNFP--ECRVCQCN---GHAATCDP 894
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G +C+ C GY+ P+G CEPC C GTL C TG+C CK +V G +
Sbjct: 454 GRRCNQCKDGYWNLQSDNPEG-CEPCTCNPLGTLNNSG----CVMRTGECKCKKYVTGKD 508
Query: 103 CDQCEVGHYNII-SGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
C+QC Y + S EGC C+CD GS + CD I+GQC CRP +TG C + N++
Sbjct: 509 CNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYF 567
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 1 MSLDVHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL 60
+S+ VH + M C P+ L V + G +C N G QCD C PG +G
Sbjct: 778 LSVFVHDGASM----CNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFG--- 830
Query: 61 PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK 120
P+G C+ C C G+ + CD +TGQC C P+ G C+QC+ G++N C+
Sbjct: 831 PEG-CKACDCNSIGSKD-----KYCDLITGQCQCVPNTYGRECNQCQPGYWNFPE---CR 881
Query: 121 SCDCDPVGSLNRTCDPITGQCL-CRPGVTGTRCELCQPNHYGFSLD----GCKPCMC 172
C C+ + TCDPI G C+ C+ TG C+ C +YG L GC+PC C
Sbjct: 882 VCQCNGHAA---TCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRC 935
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 60/217 (27%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC---------YIPG-TLETETF 81
G C+ C +T G CD+CL GY+G+ L + C PC+C + G +L+T
Sbjct: 897 GTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHADGCSLDTRNN 956
Query: 82 TPVC---------------DQLTG---------QCSCKPHV------------------- 98
+C D G +C C +V
Sbjct: 957 NMLCHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCL 1016
Query: 99 ---VGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPGVTGTRCE 153
G +C+ C+ G + + C+ C+CD +G+ N CD TGQC C P V G RC+
Sbjct: 1017 YQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCD 1076
Query: 154 LCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C NH+ S +GC+ C CDPIG+ QC+ +GQC
Sbjct: 1077 QCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQC 1113
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 IISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMC 172
+ +G C+C+P GSL++ C+ G C C+P V G +C+ C P YGF +GCK C C
Sbjct: 780 VFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFGPEGCKACDC 839
Query: 173 DPIGSNSLQCD-PSGQC 188
+ IGS CD +GQC
Sbjct: 840 NSIGSKDKYCDLITGQC 856
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 36 KCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC---YIPGTLETETFTPVCDQ 87
+C +NT G C+ C +F D A C+ C+C + + FT
Sbjct: 319 ECTHNTKGMNCEEC-EDFFNDLPWKPAFGKKTNACKKCECNDHAVSCHFDEAVFTASGFV 377
Query: 88 LTGQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVG--------SLNRT 133
G C +C + G +C++C Y +I S C+ CDCDP G SLN
Sbjct: 378 SGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSSDDGICDSLNEL 437
Query: 134 CD-PITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGS 177
+ + G C C+ VTG RC C+ ++ D GC+PC C+P+G+
Sbjct: 438 EEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGT 485
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 24/111 (21%)
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGE--------GCKSCDC-DPVGSLNRTCDPITGQ 140
G+C C + G NC++CE +N + + CK C+C D S + T
Sbjct: 316 GRCECTHNTKGMNCEECE-DFFNDLPWKPAFGKKTNACKKCECNDHAVSCHFDEAVFTAS 374
Query: 141 CLCRPGV--------TGTRCELCQPNHYG------FSLDGCKPCMCDPIGS 177
GV G CE C P Y S C+PC CDP GS
Sbjct: 375 GFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGS 425
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 14/169 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CL+C+ NT G C+ C PG++GDA+ L +C+ C C GT CD G
Sbjct: 1935 TGECLRCLNNTFGAACNLCAPGFYGDAIKLK--NCQSCDCDDLGT-------QTCDPFVG 1985
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C+C +V+G CD+C+ HY SG GC++CDC S + CDP TG C C+ GVTG
Sbjct: 1986 VCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCG-AASNSTQCDPHTGHCACKSGVTGR 2044
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFMNR 195
+C+ C +H+ + DGC PC C+ S C+P +G+C PGV +R
Sbjct: 2045 QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDR 2093
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 16/152 (10%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C N G C C GY+G P +C+ C+C G++ + C+ TG+C C
Sbjct: 470 CKINFAGAYCKQCAEGYYG----FP--ECKACECNKIGSITND-----CNVTTGECKCLT 518
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQ 156
+ G NC++C+ G++N + C CDCD G+ + C+ +GQC+CR G G RC+ C
Sbjct: 519 NFGGDNCERCKHGYFNYPT---CSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCL 575
Query: 157 PNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
P Y + CKPC C GS+++ CD +G+C
Sbjct: 576 PGFYNYP--DCKPCNCSSTGSSAITCDNTGKC 605
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 89/222 (40%), Gaps = 70/222 (31%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC---- 85
TG C KC + T G C+ C+ GY+G+A GDC C C +P ++ F C
Sbjct: 1821 ATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLP--FDSNNFATSCEISE 1878
Query: 86 --DQLTGQCSCKPHVVGTNCDQCEVGHY-------------------------------- 111
DQ+ C CKP G C+ C G Y
Sbjct: 1879 SGDQI--HCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTG 1936
Query: 112 ------NIISGEGCKSC-----------------DCDPVGSLNRTCDPITGQCLCRPGVT 148
N G C C DCD +G+ +TCDP G C C V
Sbjct: 1937 ECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGT--QTCDPFVGVCTCHENVI 1994
Query: 149 GTRCELCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RC+ C+P+HYGF S GC+ C C SNS QCDP +G C
Sbjct: 1995 GDRCDRCKPDHYGFESGVGCRACDCGA-ASNSTQCDPHTGHC 2035
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 20 PSDILKSVAG----TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
P+ ++ AG G+ KC G C+ C P Y+ ++ +G CE C C+ GT
Sbjct: 681 PAGVIDKFAGCGSVPVGELCKCKERVTGRICNECKPLYWNLNISNTEG-CEICDCWTDGT 739
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRT 133
+ C +GQC CKPH G C +C G +++ S GCK C CD GS
Sbjct: 740 ISA---LDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSV 796
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHY 160
CD I+GQC C P +TG C H+
Sbjct: 797 CDKISGQCKCHPRITGLACTQPLTTHF 823
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
+ G CL C N G QCD+C G++ P CE C C G ++ F
Sbjct: 645 NSDGQCL-CQPNFDGRQCDSCKEGFYN----FPS--CEDCNCDPAGVIDK--FAGCGSVP 695
Query: 89 TGQ-CSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNR--TCDPITGQCLC 143
G+ C CK V G C++C+ ++N I + EGC+ CDC G+++ TC +GQC C
Sbjct: 696 VGELCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPC 755
Query: 144 RPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+P G RC+ C+ + SL GCK C CD GS CD SGQC
Sbjct: 756 KPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQC 804
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C C+ N G QC C GY+ + P DC PC C G+ V
Sbjct: 601 NTGKC-NCLNNFAGKQCTLCTAGYY----SYP--DCLPCHCDSHGS------QGVSCNSD 647
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD----PITGQCLCRP 145
GQC C+P+ G CD C+ G YN S C+ C+CDP G +++ P+ C C+
Sbjct: 648 GQCLCQPNFDGRQCDSCKEGFYNFPS---CEDCNCDPAGVIDKFAGCGSVPVGELCKCKE 704
Query: 146 GVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQ---CDPSGQCP 189
VTG C C+P ++ ++ +GC+ C C G+ S SGQCP
Sbjct: 705 RVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCP 754
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 77/167 (46%), Gaps = 27/167 (16%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-------CEPCQC-YIPGTLETETFTP 83
G C C +NT G C+ C P Y+ PKG C PCQC Y T
Sbjct: 365 GVCQNCQHNTVGINCNKCKPKYY-----RPKGKHWNETDVCSPCQCDYFFSTGH------ 413
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG-QCL 142
C++ TG C C+ +CD C G+Y C+ C+C+ G+ C+ +G QC
Sbjct: 414 -CEEETGNCECRAAFQPPSCDSCAYGYYGY---PNCRECECNLNGTNGYHCEAESGQQCP 469
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C+ G C+ C +YGF CK C C+ IGS + C+ +G+C
Sbjct: 470 CKINFAGAYCKQCAEGYYGFP--ECKACECNKIGSITNDCNVTTGEC 514
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 46 CDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ 105
C C Y+G P DC+PC+C P + +C+ TG+C C P+V+G C++
Sbjct: 1405 CGACRSRYYG----FP--DCKPCKC--PNS-------AMCEPTTGECMCPPNVIGDLCEK 1449
Query: 106 CEVGHYNIISGEGCKSCDCDPVGSL--NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS 163
C Y GC+ C C+P+G N CD G C CR + G C++C ++ F
Sbjct: 1450 CAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFP 1509
Query: 164 LDGCKPCMCDPIGSNSLQCD 183
C+ C C G+ CD
Sbjct: 1510 --HCEQCSCHKPGTELEVCD 1527
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG+C+ C N G C+ C P +G + CE C C G + CD
Sbjct: 1432 TTGECM-CPPNVIGDLCEKCAPNTYGFHQVI---GCEECACNPMGIANGNS---QCDLFN 1484
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G C C+ ++ G CD C G++N C+ C C G+ CD I G C C+ V G
Sbjct: 1485 GTCECRQNIEGRACDVCSNGYFNF---PHCEQCSCHKPGTELEVCDKIDGACFCKKNVVG 1541
Query: 150 TRCELCQPNHYGFSL---DGCKPCMC 172
C+ C Y DGC C C
Sbjct: 1542 RDCDQCVDGTYNLQESNPDGCTTCFC 1567
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDC 124
P + Y L ETF + + H+ D C+ +++ + G C+C
Sbjct: 1318 PLKQYNDDLLVEETFDQTKEFIQNCGHDHFHITHNASDFCKKSVFSLTADYNSGALPCNC 1377
Query: 125 DPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
D GS + C P GQC C+P V C C+ +YGF CKPC C NS C+P
Sbjct: 1378 DYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFP--DCKPCKC----PNSAMCEP 1431
Query: 185 -SGQC 188
+G+C
Sbjct: 1432 TTGEC 1436
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGT 101
G C+ C PGY+ D G C PC+C G ET CD TG CS C+ G
Sbjct: 1784 GHSCEDCAPGYYRDPSGPYGGYCIPCEC--NGHSET------CDCATGICSKCQHGTEGD 1835
Query: 102 NCDQCEVGHY-NIISGE--GCKSCDCD-PVGSLN--------RTCDPITGQCLCRPGVTG 149
+C++C G+Y N +G C C C P S N + D I C C+PG TG
Sbjct: 1836 HCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQI--HCECKPGYTG 1893
Query: 150 TRCELCQPNHYGFSL---DGCKPCMC 172
RCE C YG CKPC C
Sbjct: 1894 PRCESCANGFYGEPESIGQVCKPCEC 1919
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTL----ETETFTPVCDQ 87
+C ++T G QC+ C PG+ + +CEPC C+ E +
Sbjct: 297 RCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLD 356
Query: 88 LTGQC-------SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTCD 135
+ G +C+ + VG NC++C+ +Y + + C C CD S C+
Sbjct: 357 IHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGH-CE 415
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG--QCP 189
TG C CR C+ C +YG+ C+ C C+ G+N C+ QCP
Sbjct: 416 EETGNCECRAAFQPPSCDSCAYGYYGYP--NCRECECNLNGTNGYHCEAESGQQCP 469
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE---GCKSCDCDPVGSLNRTCDPITGQC-LCRPG 146
+CSC P G +C+ C G+Y SG C C+C+ + TCD TG C C+ G
Sbjct: 1775 RCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECN---GHSETCDCATGICSKCQHG 1831
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMCD-PIGSNSL 180
G CE C +YG + +G C C C P SN+
Sbjct: 1832 TEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNF 1870
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 123 bits (309), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE----T 80
+S + TG+CL+C++NT G C C PG++G AL C C C+ G E
Sbjct: 982 ESCSRVTGECLRCLHNTQGANCQLCKPGHYGSAL---NQTCRRCSCHASGVSPMECPPGG 1038
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
+CD +TG C C P+V G CD+C G++N++ G GC+SCDCDP S + CD +TGQ
Sbjct: 1039 GACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTGQ 1098
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
C C+ G G RC CQ N+YG C PC C+ G+ CDP
Sbjct: 1099 CPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQKPICDP 1142
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG--DCEPCQCYIPGTLE---- 77
L S + G C C +NT G CD C P ++ D L C PC+C GT+
Sbjct: 349 LASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACIPCECDPDGTISGGIC 408
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL-NRTC 134
P + GQC CK +V G CDQC+ HY + + + GC+ CDC+P+GSL TC
Sbjct: 409 VSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLGCQPCDCNPLGSLPFLTC 468
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGF--SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
D TGQCLC VTG CE C ++G L GC PC CD G+ S C P +GQC
Sbjct: 469 DVDTGQCLCLSYVTGAHCEECTVGYWGLGNHLHGCSPCDCDIGGAYSNVCSPKNGQC 525
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
+CV L SVAG CL C N G +CD C P ++G + P G C+PC C G
Sbjct: 407 ICVSHSDPALGSVAG---QCL-CKENVEGAKCDQCKPNHYGLSATDPLG-CQPCDCNPLG 461
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRT 133
+L T CD TGQC C +V G +C++C VG++ + + GC CDCD G+ +
Sbjct: 462 SLPFLT----CDVDTGQCLCLSYVTGAHCEECTVGYWGLGNHLHGCSPCDCDIGGAYSNV 517
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLD 165
C P GQC CRP VTG C P ++ L+
Sbjct: 518 CSPKNGQCECRPHVTGRSCSEPAPGYFFAPLN 549
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 90/195 (46%), Gaps = 30/195 (15%)
Query: 22 DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGT- 75
D+ G C+ C +NT GP C+ C +F DA P D C C C +
Sbjct: 283 DVFSPPGMVHGQCV-CQHNTDGPNCERC-KDFFQDAPWRPAADLQDNACRSCSCNSHSSR 340
Query: 76 --LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPV 127
+ T+ G C C+ + G +CD+C Y I C C+CDP
Sbjct: 341 CHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACIPCECDPD 400
Query: 128 GSLN-----RTCDP----ITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPI 175
G+++ DP + GQCLC+ V G +C+ C+PNHYG S GC+PC C+P+
Sbjct: 401 GTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLGCQPCDCNPL 460
Query: 176 GS-NSLQCD-PSGQC 188
GS L CD +GQC
Sbjct: 461 GSLPFLTCDVDTGQC 475
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C T G C+ C+ GY+G+ + C PC C + + F C Q
Sbjct: 876 TGSCFNCGGFTTGRNCERCIDGYYGNPSS--GQPCRPCLCPDDPS-SNQYFAHSCYQNLW 932
Query: 91 Q----CSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLN--RTCDPITGQCL 142
C+C GT C +C G Y ISG C+ C C+ + +C +TG+CL
Sbjct: 933 SSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECL 992
Query: 143 -CRPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
C G C+LC+P HYG +L+ C+ C C G + ++C P G
Sbjct: 993 RCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGG 1038
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
C+C+ G++ + C +L GQC CKP VVG CD+C G Y++
Sbjct: 769 CKCHPQGSVGSS-----CSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQ- 822
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS 185
GS + CD +TGQC C V+G RC+ C ++GF C PC C+ CDP
Sbjct: 823 GSKDTVCDQVTGQCPCHGEVSGRRCDRCLAGYFGFP--SCHPCPCNRFAE---LCDPE 875
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 67/157 (42%), Gaps = 28/157 (17%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C C G +CD CL GYFG P C PC C F +CD T
Sbjct: 832 VTGQC-PCHGEVSGRRCDRCLAGYFG----FP--SCHPCPC--------NRFAELCDPET 876
Query: 90 GQC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQ------- 140
G C +C G NC++C G+Y N SG+ C+ C C S N+ Q
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYFAHSCYQNLWSSDV 936
Query: 141 -CLCRPGVTGTRCELCQPNHYG---FSLDGCKPCMCD 173
C C G TGT+C C YG S C+PC C+
Sbjct: 937 ICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 973
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET 78
P + S + G C +C G CD C G + L C PC C+ G+ +T
Sbjct: 773 PQGSVGSSCSRLGGQC-QCKPLVVGRCCDRCSTGSYD----LGHHGCHPCHCHPQGSKDT 827
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
VCDQ+TGQC C V G CD+C G++ S C C C+ L CDP T
Sbjct: 828 -----VCDQVTGQCPCHGEVSGRRCDRCLAGYFGFPS---CHPCPCNRFAEL---CDPET 876
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMC 172
G C C TG CE C +YG G C+PC+C
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLC 913
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+G +C C P GS+ +C + GQC C+P V G C+ C Y GC PC C P G
Sbjct: 764 DGAVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQG 823
Query: 177 SNSLQCDP-SGQCP 189
S CD +GQCP
Sbjct: 824 SKDTVCDQVTGQCP 837
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 104/169 (61%), Gaps = 10/169 (5%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE--TFTP-VCD 86
TG+CL+C++NT GP+C +C GY+G+ALA DC+ C C GT +++ +P CD
Sbjct: 1071 VTGECLRCLHNTEGPRCQSCKRGYYGNALA---QDCKECSCDRRGTDDSKCPAGSPCFCD 1127
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
Q TGQC C+P V G C++C+ G++N+ GC+ C+C+ +LN CD ITGQCLC+P
Sbjct: 1128 QDTGQCPCRPGVQGALCNECDDGYWNMDGDYGCQPCNCNREHALNYICDKITGQCLCQPE 1187
Query: 147 VTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
G C+ C PNH+G C C C+ G+ CD +G+C PGV
Sbjct: 1188 YGGRICDECGPNHFGNPDLQCMFCDCNLEGTVHPACDAYTGECLCKPGV 1236
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGD---ALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C C N GPQC+ C P Y+ D ++ P C PC C + G+++ +CD +
Sbjct: 359 GVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYA-CIPCDCDLDGSVDR----GLCDPV 413
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLN--RTCDPITGQCLCR 144
GQC CK ++ G CD+C+VG Y + GC+ C C+ +G++ CDP TG+C+C
Sbjct: 414 NGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNFLGTIQVGNPCDPTTGRCICE 473
Query: 145 PGVTGTRCELCQPNHYGF--SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G++C+ C P ++G ++ GC PC CD G+ +C GQC
Sbjct: 474 HFAYGSQCDQCLPGYWGLGNTVYGCIPCDCDIGGALKTECSSVDGQC 520
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C++ GG G A C C+ G + C + GQC
Sbjct: 819 CIELAVQAGGQTLPEVCEMLIGSMSAFIHNGAVSCNCHHVGA-----YGSSCSKFGGQCQ 873
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
CKP+V+G CD C Y + GC CDCD GS CD TGQC CR G+TG +C
Sbjct: 874 CKPNVIGRCCDSCAPLTYGL-GPNGCSPCDCDRSGSTTELCDQTTGQCSCRDGITGLQCN 932
Query: 154 LCQPNHYGFSLDGCKPC-------MCDPIGSNSLQC 182
C P +YGF L C+ C +CDPI + L C
Sbjct: 933 RCYPGYYGFPL--CRRCQCNRLADICDPITGDCLDC 966
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
G C+ C N G +CD C G++G + P G C+ C+C GT++ CD T
Sbjct: 413 VNGQCV-CKQNIEGERCDRCKVGFYGFSRDDPSG-CQLCRCNFLGTIQVGN---PCDPTT 467
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNI-ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G+C C+ G+ CDQC G++ + + GC CDCD G+L C + GQC CRP +
Sbjct: 468 GRCICEHFAYGSQCDQCLPGYWGLGNTVYGCIPCDCDIGGALKTECSSVDGQCKCRPNMV 527
Query: 149 GTRCELCQPNHYGFSLD 165
G +C P ++ LD
Sbjct: 528 GQKCNDPAPGYFLAPLD 544
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCK 95
+C N G CD+C P +G L C PC C G+ T +CDQ TGQCSC+
Sbjct: 873 QCKPNVIGRCCDSCAPLTYG----LGPNGCSPCDCDRSGST-----TELCDQTTGQCSCR 923
Query: 96 PHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGTRCEL 154
+ G C++C G+Y C+ C C+ + + CDPITG CL CR G CE
Sbjct: 924 DGITGLQCNRCYPGYYGFPL---CRRCQCNRLADI---CDPITGDCLDCREHSAGRNCER 977
Query: 155 CQPNHYGFSLDG--CKPCMC 172
C+ + G + G C+PC+C
Sbjct: 978 CEEGYVGDPVSGQPCEPCLC 997
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQLT 89
TGDCL C ++ G C+ C GY GD ++ CEPC C + G+ F+ D +
Sbjct: 960 TGDCLDCREHSAGRNCERCEEGYVGDPVS--GQPCEPCLCPDLNGSGRFFAFSCNKDPRS 1017
Query: 90 GQ--CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSC----DCDPVGSLNRTCDPITGQC 141
G C C P G CD C G Y + G CK C + DP CDP+TG+C
Sbjct: 1018 GAPYCECLPGHTGPQCDSCSPGFYGDLRLPGGRCKECCCNNNIDPRDG--DACDPVTGEC 1075
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQC---------DPSGQCP 189
L C G RC+ C+ +YG +L CK C CD G++ +C +GQCP
Sbjct: 1076 LRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDSKCPAGSPCFCDQDTGQCP 1134
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 23/192 (11%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYI 72
G D G C+ C +NT G C+ C ++ DA P G C+ C C+
Sbjct: 281 GARGDTFTEPGMVHGRCV-CQHNTAGYNCERC-QDFYHDAPWRPGGKADSDVCKRCNCHS 338
Query: 73 PGT---LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCD 123
E + G C C+ + +G C+ C +Y ++ C CD
Sbjct: 339 HSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYACIPCD 398
Query: 124 CDPVGSLNR-TCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNS 179
CD GS++R CDP+ GQC+C+ + G RC+ C+ YGFS D GC+ C C+ +G+
Sbjct: 399 CDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNFLGTIQ 458
Query: 180 L--QCDP-SGQC 188
+ CDP +G+C
Sbjct: 459 VGNPCDPTTGRC 470
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 108 VGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC 167
+G + G SC+C VG+ +C GQC C+P V G C+ C P YG +GC
Sbjct: 839 IGSMSAFIHNGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGC 898
Query: 168 KPCMCDPIGSNSLQCDP-SGQC 188
PC CD GS + CD +GQC
Sbjct: 899 SPCDCDRSGSTTELCDQTTGQC 920
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 90/161 (55%), Gaps = 6/161 (3%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQL 88
TG CLKC+Y+T G C C GY+GDAL + DC C C GT++ CD+
Sbjct: 994 TGRCLKCLYHTEGDHCQLCQYGYYGDAL---RQDCRKCVCNYLGTVKEHCNGSDCHCDKA 1050
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQCSC P+V+G NCD+C + + SG GC C+C+ S +C+ TGQC C PG
Sbjct: 1051 TGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFG 1110
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C CQ +G C+ C CDP G + QCD S GQC
Sbjct: 1111 GRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQC 1151
Score = 100 bits (248), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 94/178 (52%), Gaps = 29/178 (16%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD------CEPCQCYIPGTLETETFTPVC 85
G C C +NT G C+ C P YF P+ D CEPC C G+ +C
Sbjct: 360 GVCDNCQHNTMGRNCEQCKPFYFQH----PERDIRDPNLCEPCTCDPAGSENG----GIC 411
Query: 86 DQLT--------GQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRT 133
D T GQC CK HV G CD C+ G Y++ + + GCKSC C+P+G++
Sbjct: 412 DGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNP 471
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQC-DPSGQC 188
CD TG C C+ VTG RC+ C P H+G S LDGC+PC CD G+ + C + SGQC
Sbjct: 472 CDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQC 529
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDCE 66
+DI G + + A T +C+ N+ P D C F + AL
Sbjct: 713 LDIFTVGGSGDGEVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSIS-ALIHQTGL 771
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
C+C G+L + VCD GQC C+P+VVG C++C G + GCK CDC
Sbjct: 772 ACECDPQGSL-----SSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGF-GPNGCKPCDCHL 825
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GS + CD ITGQC C G+ +C+ C P ++GF C+PC C+ ++L CD +
Sbjct: 826 QGSASAFCDAITGQCHCFQGIYARQCDRCLPGYWGFP--SCQPCQCN---GHALDCDTVT 880
Query: 186 GQC 188
G+C
Sbjct: 881 GEC 883
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
SV G C +C + G +CD C G++ + P G C+ C C GT+ C
Sbjct: 418 SVGLIAGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYG-CKSCACNPLGTIPGGN---PC 472
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR 144
D TG C CK V G CDQC H+ + + +GC+ CDCD G+LN +C +GQC C
Sbjct: 473 DSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCL 532
Query: 145 PGVTGTRCELCQPNHYGFSLD 165
P + G +C + +Y +LD
Sbjct: 533 PHMIGRQCNEVESGYYFTTLD 553
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ-- 87
TG+CL C T G C+ CL GY+GD + C PC C G F C Q
Sbjct: 879 VTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPC-PDGPDSGRQFARSCYQDP 937
Query: 88 --LTGQCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDC-------DPVGSLNRTCDP 136
L C C P +G+ CD C G + S G C+ C C DP CD
Sbjct: 938 VTLQLACVCDPGYIGSRCDDCASGFFGNPSDFGGSCQPCQCHHNIDTTDP-----EACDK 992
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPS 185
TG+CL C G C+LCQ +YG +L C+ C+C+ +G+ C+ S
Sbjct: 993 ETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGS 1043
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L SV G +C N G C+ C PG FG P G C+PC C++
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFG---PNG-CKPCDCHLQ 826
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G+ + CD +TGQC C + CD+C G++ S C+ C C+
Sbjct: 827 GSA-----SAFCDAITGQCHCFQGIYARQCDRCLPGYWGFPS---CQPCQCNGHA---LD 875
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSL----DGCKPCMC 172
CD +TG+CL C+ TG CE C +YG + D C+PC C
Sbjct: 876 CDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPC 919
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 18 GPPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYI 72
P + + V G G C+ C +NT G C+ C+ Y + A C+ C C
Sbjct: 281 APVDGVNEEVEGMVHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNE 339
Query: 73 PGT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCD 123
+ + F + G C +C+ + +G NC+QC+ ++ +I C+ C
Sbjct: 340 HSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCT 399
Query: 124 CDPVGSLNR-TCD--------PITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCM 171
CDP GS N CD I GQC C+ V G RC++C+ Y S + GCK C
Sbjct: 400 CDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCA 459
Query: 172 CDPIGS 177
C+P+G+
Sbjct: 460 CNPLGT 465
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQL 88
TG CLKC+Y+T G C C GY+GDAL + DC C C GT++ CD+
Sbjct: 994 TGRCLKCLYHTEGEHCQFCRFGYYGDAL---QQDCRKCVCNYLGTVQEHCNGSDCQCDKA 1050
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQC C P+V+G NCD+C + + SG GC C+C+ S +C+ TGQC C PG
Sbjct: 1051 TGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFG 1110
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C CQ +G C+ C CDP G + QCD S GQC
Sbjct: 1111 GRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQC 1151
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 93/174 (53%), Gaps = 21/174 (12%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD------CEPCQCYIPGTLET---ETFT 82
G C C +NT G C+ C P Y+ P+ D CE C C G+ +++T
Sbjct: 360 GVCDDCQHNTMGRNCEQCKPFYYQH----PERDIRDPNFCERCTCDPAGSQNEGICDSYT 415
Query: 83 PVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTCDPI 137
L GQC CK +V G +CD C+ G Y++ S + GCKSC C+P+G++ CD
Sbjct: 416 DFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGGNPCDSE 475
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQC-DPSGQC 188
TG C C+ VTG C+ C P H+G S LDGC+PC CD G+ + C SGQC
Sbjct: 476 TGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCFAESGQC 529
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDCE 66
+DI G ++ + A T +C+ N+ P D C F + L +
Sbjct: 713 LDIFTVGGSGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGL- 771
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
C+C G+L + VCD GQC C+P+VVG C++C G + GCK C+C
Sbjct: 772 ACECDPQGSL-----SSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGF-GPSGCKPCECHL 825
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GS+N C+P+TGQC C GV +C+ C P H+GF C+PC C+ ++ CDP +
Sbjct: 826 QGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFP--SCQPCQCN---GHADDCDPVT 880
Query: 186 GQC 188
G+C
Sbjct: 881 GEC 883
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCK 95
+C N G CD C G++ + P G C+ C C GT+ CD TG C CK
Sbjct: 427 RCKLNVEGEHCDVCKEGFYDLSSEDPFG-CKSCACNPLGTIPGGN---PCDSETGHCYCK 482
Query: 96 PHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
V G +CDQC H+ + + +GC+ CDCD G+LN +C +GQC CRP + G +C
Sbjct: 483 RLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNE 542
Query: 155 CQPNHYGFSLD 165
+P +Y +LD
Sbjct: 543 VEPGYYFATLD 553
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L SV G +C N G C+ C PG FG P G C+PC+C++
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFG---PSG-CKPCECHLQ 826
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G++ C+ +TGQC C V CD+C GH+ S C+ C C+
Sbjct: 827 GSV-----NAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS---CQPCQCNGHAD---D 875
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSL----DGCKPCMC 172
CDP+TG+CL C+ G CE C +YG + D C+PC C
Sbjct: 876 CDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPC 919
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ-- 87
TG+CL C T G C+ CL GY+GD + C PC C G F C Q
Sbjct: 879 VTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPC-PDGPDSGRQFARSCYQDP 937
Query: 88 --LTGQCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDC-DPVGSLN-RTCDPITGQC 141
L C C P +G+ CD C G++ S G C+ C C + + + + CD TG+C
Sbjct: 938 VTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRC 997
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPS 185
L C G C+ C+ +YG +L C+ C+C+ +G+ C+ S
Sbjct: 998 LKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVCNYLGTVQEHCNGS 1043
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Query: 121 SCDCDPVGSLNRTCD-PITGQCLCRPGVTGTRCELCQPNHY--------GFSLDGCKPCM 171
+ +C PV N + + G C+CR G CELC ++ G + + CK C
Sbjct: 277 ASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCN 336
Query: 172 CD 173
C+
Sbjct: 337 CN 338
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKC++NT G C+ C G++GDA+ +C C C+ G+L + VC T
Sbjct: 873 VTGECLKCLWNTDGAHCERCADGFYGDAVTAK--NCRACDCHENGSL-----SGVCHLET 925
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G C CKPHV G CDQC G+Y + +G GC C+C GS++ C GQC C PGV+G
Sbjct: 926 GLCDCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTE-EGQCHCGPGVSG 984
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C Y F GC PC C +N CDP SG+C
Sbjct: 985 KQCDRCSHGFYAFQDGGCTPCDCAHTQNN---CDPASGEC 1021
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVC---- 85
TG CL C +T G C+ C GY+G LP GDC PC C + P +F+P C
Sbjct: 1423 TGKCLSCRDHTSGDHCELCASGYYGKVTGLP-GDCTPCTCPHHPPF----SFSPTCVVEG 1477
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
D +C P G C++C G++ +G C++CDC+P GS++ CD +GQC+C
Sbjct: 1478 DSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHSDCDRASGQCVC 1537
Query: 144 RPGVTGTRCELCQPNH 159
+PG TG CE C P H
Sbjct: 1538 KPGATGLHCEKCLPRH 1553
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 65/223 (29%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP-------- 83
G C C +NT G C+ CLPG++G GDC+PC C P ++++ F+P
Sbjct: 762 GICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCAC--PLSIDSNNFSPTCHLTDGE 819
Query: 84 --VCDQ-----------------------------------------------LTGQC-S 93
VCDQ +TG+C
Sbjct: 820 EVVCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGHCDSVTGECLK 879
Query: 94 CKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
C + G +C++C G Y + ++ + C++CDC GSL+ C TG C C+P VTG +C
Sbjct: 880 CLWNTDGAHCERCADGFYGDAVTAKNCRACDCHENGSLSGVCHLETGLCDCKPHVTGQQC 939
Query: 153 ELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDPSGQC---PGV 191
+ C +YG GC PC C GS S C GQC PGV
Sbjct: 940 DQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTEEGQCHCGPGV 982
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G QCD C G++ A G C PC C T+ CD +G+C C PH G
Sbjct: 984 GKQCDRCSHGFY----AFQDGGCTPCDC-----AHTQN---NCDPASGECLCPPHTQGLK 1031
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
C++CE ++ + +GC++C+C VGS + CD ++G C C+ G G C C + F
Sbjct: 1032 CEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSCHQCSLGYRSF 1091
Query: 163 SLDGCKPCMCDPIGSNSLQCD 183
C PC CD G+ CD
Sbjct: 1092 P--DCVPCGCDLRGTLPDTCD 1110
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLET-----ETFTPV 84
G C+ C NT G C+TC+ Y+ P D C PC C G+L + + +
Sbjct: 366 GVCVNCSQNTTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADL 425
Query: 85 CD-QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+ + GQC C+ G CD+C+ G+ C CDC VGSLN DP CLC
Sbjct: 426 ANGKWPGQCPCRKGYAGDKCDRCQFGYRGF---PNCIPCDCRTVGSLNE--DPCIEPCLC 480
Query: 144 RPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
+ V G C+ C+P Y +GC C C
Sbjct: 481 KKNVEGKNCDRCKPGFYNLKERNPEGCSECFC 512
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 24/155 (15%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G+CL C +T G +C+ C Y+G P+ C+ C C G+ + CD L+
Sbjct: 1017 ASGECL-CPPHTQGLKCEECEEAYWG---LDPEQGCQACNCSAVGSTSAQ-----CDVLS 1067
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD---------PITGQ 140
G C CK G +C QC +G+ + C C CD G+L TCD +G
Sbjct: 1068 GHCPCKKGFGGQSCHQCSLGYRSF---PDCVPCGCDLRGTLPDTCDLEQGLCSCSEDSGT 1124
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C C+ V G +C CQ + D GC PC C
Sbjct: 1125 CSCKENVVGPQCSKCQAGTFALRGDNPQGCSPCFC 1159
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDAL---ALPKG-DCEPCQC-------YIPGTLETETFT-P 83
+C +NT G CD C PGY + G +CE C C Y ++ E +
Sbjct: 298 QCEHNTCGESCDRCCPGYHQQPWRPGTISSGNECEECNCHNKAKDCYYDSSVAKERRSLN 357
Query: 84 VCDQLTGQ---CSCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTC- 134
Q +G +C + G NC+ C +Y + C+ C+CDPVGSL+ C
Sbjct: 358 TAGQYSGGGVCVNCSQNTTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCI 417
Query: 135 ----------DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
GQC CR G G +C+ CQ + GF C PC C +G SL DP
Sbjct: 418 KDDRHADLANGKWPGQCPCRKGYAGDKCDRCQFGYRGFP--NCIPCDCRTVG--SLNEDP 473
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 73/170 (42%), Gaps = 31/170 (18%)
Query: 41 TGGPQCDTCLPGYFGDALALPKGD--------CEPCQCYIPGTLETETFTPVCDQLTGQC 92
T G C C PGY+ + L G C PC C + VCD TG+C
Sbjct: 1375 TAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNC--------NNHSDVCDPETGKC 1426
Query: 93 -SCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDC--DPVGSLNRTCDPITGQC-----L 142
SC+ H G +C+ C G+Y ++G C C C P S + TC + G
Sbjct: 1427 LSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCTCPHHPPFSFSPTC-VVEGDSDFRCNA 1485
Query: 143 CRPGVTGTRCELCQPNHYG---FSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C PG G CE C ++G + C+ C C+P GS CD SGQC
Sbjct: 1486 CLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHSDCDRASGQC 1535
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 63/227 (27%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY- 71
+ L + P+ I +VA C +C G C+ CLPGY+ L G C+PC+C+
Sbjct: 695 VSLDIASPNAIDLAVAADVEHC-ECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECHG 753
Query: 72 --------------------------IPG--------------------TLETETFTPVC 85
+PG ++++ F+P C
Sbjct: 754 HASECDIHGICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSIDSNNFSPTC 813
Query: 86 DQLTGQC----SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCD 135
G+ C P G+ C++C G+Y + G C C+C DP+ + + CD
Sbjct: 814 HLTDGEEVVCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGH--CD 871
Query: 136 PITGQCL-CRPGVTGTRCELCQPNHYG--FSLDGCKPCMCDPIGSNS 179
+TG+CL C G CE C YG + C+ C C GS S
Sbjct: 872 SVTGECLKCLWNTDGAHCERCADGFYGDAVTAKNCRACDCHENGSLS 918
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C+ G C+ C GY G+ A G C+ C C G++ ++ CD+ +GQC
Sbjct: 1483 CNACLPGYEGQYCERCSAGYHGNPRA-AGGSCQTCDCNPQGSVHSD-----CDRASGQCV 1536
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
CKP G +C++C H I+ C SCD D VG L D + G + +TG
Sbjct: 1537 CKPGATGLHCEKCLPRH--ILMESDCVSCDDDCVGPLLNDLDSV-GDAVLSLNLTGV 1590
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C G +CD C GY G P +C PC C G+L D C CK
Sbjct: 436 CRKGYAGDKCDRCQFGYRG----FP--NCIPCDCRTVGSLNE-------DPCIEPCLCKK 482
Query: 97 HVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPIT 138
+V G NCD+C+ G YN+ EGC C C V + CD +T
Sbjct: 483 NVEGKNCDRCKPGFYNLKERNPEGCSECFCFGVSGV---CDSLT 523
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL----ETETFTPVCDQLTGQC 92
C GG C C GY + P DC PC C + GTL + E C + +G C
Sbjct: 1072 CKKGFGGQSCHQCSLGY----RSFP--DCVPCGCDLRGTLPDTCDLEQGLCSCSEDSGTC 1125
Query: 93 SCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSL 130
SCK +VVG C +C+ G + + +GC C C + L
Sbjct: 1126 SCKENVVGPQCSKCQAGTFALRGDNPQGCSPCFCFGLSQL 1165
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG-----------CKSCDCDPVGSLNRTCDPITGQ 140
C C P G +C C G+Y E C C+C+ + + CDP TG+
Sbjct: 1369 CVCPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNCN---NHSDVCDPETGK 1425
Query: 141 CL-CRPGVTGTRCELCQPNHYG--FSLDG-CKPCMC 172
CL CR +G CELC +YG L G C PC C
Sbjct: 1426 CLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCTC 1461
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 29/121 (23%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDC---------DPVGSLNRTC 134
QC C+ + G +CD+C G++ I SG C+ C+C D + R
Sbjct: 296 QCQCEHNTCGESCDRCCPGYHQQPWRPGTISSGNECEECNCHNKAKDCYYDSSVAKERRS 355
Query: 135 DPITGQ-------CLCRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQ 181
GQ C TG CE C +Y + C+PC CDP+GS S
Sbjct: 356 LNTAGQYSGGGVCVNCSQNTTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSV 415
Query: 182 C 182
C
Sbjct: 416 C 416
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKC+ NT G C+ C G++GDA+ +C C+C++ G+ + VC T
Sbjct: 866 VTGECLKCLGNTDGAHCERCADGFYGDAVTAK--NCRACECHVKGS-----HSAVCHLET 918
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G C CKP+V G CDQC G+Y + SG GC+ C+C GS++ C GQC C PGV G
Sbjct: 919 GLCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSDGCTD-EGQCHCVPGVAG 977
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
RC+ C Y + C PC C P N+ CDP +G+C
Sbjct: 978 KRCDRCAHGFYAYQDGSCTPCDC-PHTQNT--CDPETGEC 1014
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 26 SVAGTTGD-CL-----KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
SVAG+ D C C+ G +CD C G++ A G C PC C P T T
Sbjct: 954 SVAGSVSDGCTDEGQCHCVPGVAGKRCDRCAHGFY----AYQDGSCTPCDC--PHTQNT- 1006
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
CD TG+C C PH G C++CE GH+ + GC++C+C VGS + CD +TG
Sbjct: 1007 -----CDPETGECVCPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTG 1061
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
C C+ G C+ C + F C PC CD G++ C+
Sbjct: 1062 HCQCKSKFGGRACDQCSLGYRDFP--DCVPCDCDLRGTSGDACN 1103
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 93/227 (40%), Gaps = 65/227 (28%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C+ C +NT G C+ CLPG++G+ GDC+PC C P T+ + F+P C G
Sbjct: 755 GVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGDCQPCAC--PLTIASNNFSPTCHLNDGD 812
Query: 92 C----SCKPHVVGTNCDQC---------------------------EVGHYNIISGE--- 117
C P G C++C E GH + ++GE
Sbjct: 813 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 118 -------------------------GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
C++C+C GS + C TG C C+P VTG +C
Sbjct: 873 CLGNTDGAHCERCADGFYGDAVTAKNCRACECHVKGSHSAVCHLETGLCDCKPNVTGQQC 932
Query: 153 ELCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDPSGQC---PGVFMNR 195
+ C +YG S GC+PC C GS S C GQC PGV R
Sbjct: 933 DQCLHGYYGLDSGHGCRPCNCSVAGSVSDGCTDEGQCHCVPGVAGKR 979
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQL 88
TG CL C NT G CD C GY+G DC C C + P +F+P C L
Sbjct: 1415 NTGKCLNCGDNTAGDHCDVCTSGYYGKVTG-SASDCALCACPHSPPA----SFSPTC-VL 1468
Query: 89 TGQC-----SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRTCDPITGQC 141
G +C G +C++C +Y G C+ CDC+P GS++ CD +GQC
Sbjct: 1469 EGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHGDCDRTSGQC 1528
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD 165
+CR G +G RC+ C+P H D
Sbjct: 1529 VCRLGASGLRCDECEPRHILMETD 1552
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVC--DQ 87
G C+ C+ NT G C+TC+ GY+ P D C PC C G+L + VC D
Sbjct: 359 GVCINCLQNTMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVGSLSS-----VCIKDD 413
Query: 88 LT---------GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
L GQC CK G CD+C++G+ + + C SC C+PVGS + +P T
Sbjct: 414 LHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASD--EPCT 468
Query: 139 GQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
G C+C+ V G C+ C+P Y GC C C
Sbjct: 469 GPCVCKENVEGKACDRCKPGFYNLKEKNPRGCSECFC 505
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 33/175 (18%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDAL---ALPKGD-CEPCQC--------YIPGTLETETFTP 83
+C +NT G C+ C PGY + G+ CE C C Y + +
Sbjct: 291 QCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEACNCHNKAKDCYYDESVAKQKKSLN 350
Query: 84 VCDQLTGQ---CSCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTC- 134
Q G +C + +G NC+ C G+Y + E C+ C+CDPVGSL+ C
Sbjct: 351 TAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVGSLSSVCI 410
Query: 135 -DPIT---------GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
D + GQC C+ G TG +C+ CQ + + C C C+P+GS S
Sbjct: 411 KDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYKDYPT--CVSCGCNPVGSAS 463
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 74/200 (37%), Gaps = 62/200 (31%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCY---------------------------IPG- 74
G C++CL GY+ L G C+PC+C+ +PG
Sbjct: 717 GTSCESCLSGYYRVDGILFGGICQPCECHGHAAECNVHGVCIACAHNTTGVHCEQCLPGF 776
Query: 75 -------------------TLETETFTPVCDQLTGQC----SCKPHVVGTNCDQCEVGHY 111
T+ + F+P C G C P G C++C G+Y
Sbjct: 777 YGEPSRGTPGDCQPCACPLTIASNNFSPTCHLNDGDEVVCDWCAPGYSGAWCERCADGYY 836
Query: 112 N--IISGEGCKSCDC----DPVGSLNRTCDPITGQCL-CRPGVTGTRCELCQPNHYG--F 162
+ GE C CDC DP S CD +TG+CL C G CE C YG
Sbjct: 837 GNPTVPGESCVPCDCSGNVDP--SEAGHCDSVTGECLKCLGNTDGAHCERCADGFYGDAV 894
Query: 163 SLDGCKPCMCDPIGSNSLQC 182
+ C+ C C GS+S C
Sbjct: 895 TAKNCRACECHVKGSHSAVC 914
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 86/212 (40%), Gaps = 41/212 (19%)
Query: 5 VHHVSVMDILLCVGPPSDIL---KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALP 61
+ + DI + VG ++ L + VA +C+ C T G C C PGY LP
Sbjct: 1330 LQQSRISDISMEVGRKAEKLHPEEEVASLLENCV-CPPGTVGFSCQDCAPGYHRG--KLP 1386
Query: 62 KGD----------CEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGH 110
G C PC C + CD TG+C +C + G +CD C G+
Sbjct: 1387 AGSDRGPRPLVAPCVPCSC--------NNHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGY 1438
Query: 111 YNIISGEG--CKSCDC--DPVGSLNRTC------DPITGQCLCRPGVTGTRCELCQPNHY 160
Y ++G C C C P S + TC D CL G G CE C ++Y
Sbjct: 1439 YGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFRCDACLL--GYEGKHCERCSSSYY 1496
Query: 161 GFSLD---GCKPCMCDPIGSNSLQCD-PSGQC 188
G C+ C C+P GS CD SGQC
Sbjct: 1497 GNPQTPGGSCQKCDCNPHGSVHGDCDRTSGQC 1528
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL----ETETFTPVC 85
TG C +C GG CD C GY P DC PC C + GT E C
Sbjct: 1059 VTGHC-QCKSKFGGRACDQCSLGYRD----FP--DCVPCDCDLRGTSGDACNLEQGLCGC 1111
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL 130
+ TG C CK +V G C++C G + + + GC C C + L
Sbjct: 1112 VEETGACPCKENVFGPQCNECREGTFALRADNPLGCSPCFCSGLSHL 1158
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 29/121 (23%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDC----------DPVGSLNRT 133
QC C+ + G +C++C G++ + SG C++C+C + V ++
Sbjct: 289 QCQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEACNCHNKAKDCYYDESVAKQKKS 348
Query: 134 CDPIT-----GQCL-CRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQ 181
+ G C+ C G CE C +Y + + C+PC CDP+GS S
Sbjct: 349 LNTAGQFRGGGVCINCLQNTMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVGSLSSV 408
Query: 182 C 182
C
Sbjct: 409 C 409
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 12/159 (7%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C T G C+ C GYFGDA+ +C+PC+C G+ F+ VC TG
Sbjct: 883 SGSCLICKPGTTGRYCELCADGYFGDAVDAK--NCQPCRCNAGGS-----FSEVCHSQTG 935
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+ +V G CD+C+ G + + S GC C+C+ GS + C+ +GQC C+PGVTG
Sbjct: 936 QCECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEE-SGQCWCQPGVTGK 994
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N CDP +G+C
Sbjct: 995 KCDRCAHGYFNFQEGGCTACECSHLGNN---CDPKTGRC 1030
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 14/171 (8%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQ 87
TG+CL C +TGGP CD CLPG++G+ DC+PC C P + + F+P C D+
Sbjct: 769 VTGECLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCAC--PLNIPSNNFSPTCHLDR 826
Query: 88 LTGQC--SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPV--GSLNRTCDPITGQC 141
G C G C++C G++ + G C+ C C+ S+ +CD ++G C
Sbjct: 827 SLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSC 886
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQC-DPSGQC 188
L C+PG TG CELC ++G ++D C+PC C+ GS S C +GQC
Sbjct: 887 LICKPGTTGRYCELCADGYFGDAVDAKNCQPCRCNAGGSFSEVCHSQTGQC 937
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G +CD C GYF +G C C+C G CD TG+C C P+ +G
Sbjct: 993 GKKCDRCAHGYFN----FQEGGCTACECSHLGN--------NCDPKTGRCICPPNTIGEK 1040
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
C +C + GCK+C+C VGSL+ C+ TGQC C P +G +C C H+ +
Sbjct: 1041 CSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNY 1100
Query: 163 SLDGCKPCMCDPIGSNSLQCD 183
C C C G+++ CD
Sbjct: 1101 PR--CNLCDCFLPGTDATTCD 1119
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQL 88
T C C ++T G C+ C GY+G LP DC+ C C P + F+P V + L
Sbjct: 1433 TSICQNCQHHTAGDFCERCALGYYGIVKGLP-NDCQQCAC--PLISSSNNFSPSCVAEGL 1489
Query: 89 TGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLCR 144
+C G C++C G+ G C+ C+CDP GSL CDP+TG C CR
Sbjct: 1490 DDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCR 1549
Query: 145 PGVTGTRCELCQPNH 159
PG TG +C+ C+ H
Sbjct: 1550 PGATGRKCDGCKHWH 1564
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C C P +G ++ C+ C C G+L+ + C+ TG
Sbjct: 1027 TGRCI-CPPNTIGEKCSKCAPNTWGHSITT---GCKACNCSTVGSLDFQ-----CNVNTG 1077
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP---------ITGQC 141
QC+C P G C +C GH+N C CDC G+ TCD TGQC
Sbjct: 1078 QCNCHPKFSGAKCTECSRGHWNYPR---CNLCDCFLPGTDATTCDSETKKCSCSDQTGQC 1134
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G C+ C+P +G GC C C
Sbjct: 1135 TCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC 1168
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-------DCEPCQCYIPGTLE----TET 80
G C+ C NT G C+TC G+F PKG C+PC C G+L +
Sbjct: 376 GVCINCTQNTAGINCETCTDGFF-----RPKGVSPNYPRPCQPCHCDPIGSLNEVCVKDE 430
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
G C CK G +CD+C G+ CK+C+C +GS N DP G
Sbjct: 431 KHARRGLAPGSCHCKTGFGGVSCDRCARGYTGY---PDCKACNCSGLGSKNE--DPCFGP 485
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSN 178
C+C+ V G C C+ + D GC C C + +
Sbjct: 486 CICKENVEGGDCSRCKSGFFNLQEDNWKGCDECFCSGVSNR 526
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYF-------GDALALPKGDCEPCQCY 71
PP+D+++ C G C+ CLPG++ G G C PCQC
Sbjct: 1372 PPADLIEKC--------DCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQC- 1422
Query: 72 IPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVG 128
+ +CD T C +C+ H G C++C +G+Y I+ G C+ C C +
Sbjct: 1423 -------NGHSSLCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLIS 1475
Query: 129 SLNRTCDPITGQCL-------CRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSN 178
S N + L C G G CE C P + G + C+ C CDP GS
Sbjct: 1476 SSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSL 1535
Query: 179 SLQCDP 184
+ CDP
Sbjct: 1536 PVPCDP 1541
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTL----ETETFTPVCDQ 87
+C +NT G CD C PG+ + L K +CE C C+ E +
Sbjct: 308 ECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDENVARRNLSLN 367
Query: 88 LTGQ-------CSCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRTCD 135
+ G+ +C + G NC+ C G + C+ C CDP+GSLN C
Sbjct: 368 IRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKGVSPNYPRPCQPCHCDPIGSLNEVCV 427
Query: 136 P---------ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
G C C+ G G C+ C + G+ CK C C +GS +
Sbjct: 428 KDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYTGYP--DCKACNCSGLGSKN 478
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNI---ISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGV 147
C C P G++C+ C H + I G C+ C C +CD +TG+CL C+
Sbjct: 724 CQCPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQC---FGHAESCDDVTGECLNCKDHT 780
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMC 172
G C+ C P YG G C+PC C
Sbjct: 781 GGPYCDKCLPGFYGEPTKGTSEDCQPCAC 809
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE---TFTPVCDQ 87
TG CL+C++NT GP C C PG+ G A + C C C + GT T CD
Sbjct: 1005 TGQCLRCLHNTEGPHCGYCKPGFHGQA---ARQSCHRCTCNLLGTDPRRCPSTDLCHCDP 1061
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC C PHV G NCD C +N SG GC+ C C P + TC+ TGQC C G
Sbjct: 1062 STGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHPSRARGPTCNEFTGQCHCHAGF 1121
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGV 191
G C CQ ++G C+ C CDP G + QC S G C PGV
Sbjct: 1122 GGRTCSECQELYWGDPGLQCRACDCDPRGIDKPQCHRSTGHCSCRPGV 1169
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 13/170 (7%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPK--GDCEPCQCYIPGTLE----TETFTPVC 85
G C C +NT G C+ C P ++ D + C PC C G+ + PV
Sbjct: 375 GVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAVCRPCDCDPMGSQDGGRCDSHDDPVL 434
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTCDPITGQC 141
++GQC CK HVVGT C QC G + + + + GC+ C C+ G++ + CD +G C
Sbjct: 435 GLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRGCQRCQCNSRGTVPGSSPCDSSSGTC 494
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDPS-GQC 188
C+ VTG C+ C P H+G S D GC+PC CD G+ QCD + GQC
Sbjct: 495 FCKRLVTGHGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQC 544
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 7 HVSVMDILLCVGPPSDILKSVAGTTGDCLKC----IYNTGGPQCDTCLPGYFGDALALPK 62
HV V+++ D TT + +C + + P +TC P + +
Sbjct: 724 HVLVLEMF----SGGDAAALERRTTFERYRCHEEGLMPSKAPLSETCAPLLISVSALIYN 779
Query: 63 GDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
G PCQC G+L +E C GQC CKP VVG CD C G+Y GC++C
Sbjct: 780 GAL-PCQCDPQGSLSSE-----CSPHGGQCRCKPGVVGRRCDVCATGYYGFGPA-GCQAC 832
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCD 173
C P G+L+ C+ +GQC CRPG G RC+ CQ +GF C+PC+C+
Sbjct: 833 QCSPDGALSALCEGTSGQCPCRPGAFGLRCDHCQRGQWGFP--NCRPCVCN 881
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G C +C + G +C C G+FG + + P+G C+ CQC GT+ + CD +
Sbjct: 437 VSGQC-RCKEHVVGTRCQQCRDGFFGLSASDPRG-CQRCQCNSRGTVPGSS---PCDSSS 491
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G C CK V G CD+C GH+ + GC+ CDCD G+L+ CD TGQC CR +
Sbjct: 492 GTCFCKRLVTGHGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQCRCRQHMI 551
Query: 149 GTRCELCQPNHYGFSLD 165
G RCE QP ++ LD
Sbjct: 552 GRRCEQVQPGYFRPFLD 568
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C CDP GSL+ C P GQC C+PGV G RC++C +YGF GC+ C C P G+
Sbjct: 780 GALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDGA 839
Query: 178 NSLQCD-PSGQCP 189
S C+ SGQCP
Sbjct: 840 LSALCEGTSGQCP 852
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQLT 89
TG CL C TGG C+ C+ G+ GD G C PC C PG+ + D +
Sbjct: 891 TGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYS 950
Query: 90 GQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDC----DPVGSLNRTCDPITGQC 141
Q C C+ G C+ C GH+ S G C+ C+C DP+ CDP TGQC
Sbjct: 951 QQIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPMDP--DACDPHTGQC 1008
Query: 142 L-CRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ--------CDPS-GQCP 189
L C G C C+P +G + C C C+ +G++ + CDPS GQCP
Sbjct: 1009 LRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGTDPRRCPSTDLCHCDPSTGQCP 1067
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P L S G +C G +CD C GY+G P G C+ CQC G L
Sbjct: 788 PQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFG---PAG-CQACQCSPDGAL--- 840
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
+ +C+ +GQC C+P G CD C+ G + + C+ C C+ CD TG
Sbjct: 841 --SALCEGTSGQCPCRPGAFGLRCDHCQRGQWGFPN---CRPCVCNGRAD---ECDTHTG 892
Query: 140 QCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMC 172
CL CR G CE C +G G C+PC C
Sbjct: 893 ACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPC 930
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 35/179 (19%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGTLETETFTPVCDQLTGQ 91
C +NT G C+ C ++ D P D C C+C G + F +G
Sbjct: 315 CKHNTRGLNCEQC-QDFYQDLPWHPAEDGHTHACRKCECN--GHTHSCHFDMAVYLASGN 371
Query: 92 CS------CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNR-TCDP--- 136
S C+ + G +C+ C Y ++ C+ CDCDP+GS + CD
Sbjct: 372 VSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAVCRPCDCDPMGSQDGGRCDSHDD 431
Query: 137 -----ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
++GQC C+ V GTRC+ C+ +G S DP G QC+ G PG
Sbjct: 432 PVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSAS-------DPRGCQRCQCNSRGTVPG 483
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 22/113 (19%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII-------SGEGCKSCDCD--------PVGSLNR 132
+ G C CK + G NC+QC+ + ++ C+ C+C+ +
Sbjct: 309 VHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGHTHACRKCECNGHTHSCHFDMAVYLA 368
Query: 133 TCDPITGQCL-CRPGVTGTRCELCQPNHYGFSLDG------CKPCMCDPIGSN 178
+ + G C C+ G CE C+P Y C+PC CDP+GS
Sbjct: 369 SGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAVCRPCDCDPMGSQ 421
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE---TFTPVCDQ 87
TG CL+C+++T GP C C PG+ G A + C C C + GT T CD
Sbjct: 1007 TGQCLRCLHHTEGPHCGHCKPGFHGQA---ARQSCHRCTCNLLGTDPQRCPSTDLCHCDP 1063
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC C PHV G +CD+C +N SG GC+ C C P + TC+ TGQC C G
Sbjct: 1064 STGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHPSRARGPTCNEFTGQCHCHAGF 1123
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGV 191
G C CQ H+G C+ C CDP G + QC S G C PGV
Sbjct: 1124 GGRTCSECQELHWGDPGLQCRACDCDPRGIDKPQCHRSTGHCSCRPGV 1171
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPK--GDCEPCQCYIPGTLE----TETFTPVC 85
G C C +NT G C+ C P ++ D + C PC C G+ + PV
Sbjct: 375 GVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAACRPCDCDPMGSQDGGRCDSHDDPVL 434
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSL--NRTCDPITGQC 141
++GQC CK HVVGT C QC G + + + GC+ C C+ G++ CD +G C
Sbjct: 435 GLVSGQCRCKEHVVGTRCQQCRDGFFGLSASNPRGCQRCQCNSRGTVPGGTPCDSSSGTC 494
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDPS-GQCP 189
C+ VTG C+ C P H+G S D GC+PC CD G+ QCD + GQCP
Sbjct: 495 FCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQCP 545
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G C +C + G +C C G+FG + + P+G C+ CQC GT+ T CD +
Sbjct: 437 VSGQC-RCKEHVVGTRCQQCRDGFFGLSASNPRG-CQRCQCNSRGTVPGGT---PCDSSS 491
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G C CK V G CD+C GH+ + GC+ CDCD G+L+ CD TGQC CRP +
Sbjct: 492 GTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQCPCRPHMI 551
Query: 149 GTRCELCQPNHYGFSLD 165
G RCE QP ++ LD
Sbjct: 552 GRRCEQVQPGYFRPFLD 568
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC 103
P + C+P A +L PCQC G+L +E C+ GQC CKP VVG C
Sbjct: 763 PLSEACVP-LLISASSLVYNGALPCQCDPQGSLSSE-----CNPHGGQCRCKPGVVGRRC 816
Query: 104 DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS 163
D C G+Y GC++C C P G+L+ C+ +GQCLCR G G RC+ CQ +GF
Sbjct: 817 DACATGYYGFGPA-GCQACQCSPDGALSALCEGTSGQCLCRTGAFGLRCDHCQRGQWGFP 875
Query: 164 LDGCKPCMCD 173
C+PC+C+
Sbjct: 876 --NCRPCVCN 883
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C CDP GSL+ C+P GQC C+PGV G RC+ C +YGF GC+ C C P G+
Sbjct: 782 GALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGA 841
Query: 178 NSLQCD-PSGQC 188
S C+ SGQC
Sbjct: 842 LSALCEGTSGQC 853
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQLT 89
TG CL C TGG C+ C+ G+ GD G C PC C PG+ + D +
Sbjct: 893 TGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHRDGYS 952
Query: 90 GQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT----CDPITGQC 141
Q C C+ G C+ C GH+ S G C+ C+C G+++ T CDP TGQC
Sbjct: 953 QQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLCECS--GNIDPTDPGACDPHTGQC 1010
Query: 142 L-CRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ--------CDPS-GQCP 189
L C G C C+P +G + C C C+ +G++ + CDPS GQCP
Sbjct: 1011 LRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLCHCDPSTGQCP 1069
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 67/158 (42%), Gaps = 20/158 (12%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P L S G +C G +CD C GY+G P G C+ CQC G L
Sbjct: 790 PQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFG---PAG-CQACQCSPDGAL--- 842
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
+ +C+ +GQC C+ G CD C+ G + + C+ C C+ CD TG
Sbjct: 843 --SALCEGTSGQCLCRTGAFGLRCDHCQRGQWGFPN---CRPCVCNGRAD---ECDAHTG 894
Query: 140 QCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMC 172
CL CR G CE C +G G C+PC C
Sbjct: 895 ACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPC 932
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 22/113 (19%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII-------SGEGCKSCDCDPVG---SLNRTCDPI 137
+ G C CK + G NC+QC+ + ++ C+ C+C+ +
Sbjct: 309 VHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGHTHACRKCECNGHSHSCHFDMAVYLA 368
Query: 138 TGQCL------CRPGVTGTRCELCQPNHYGFSLD------GCKPCMCDPIGSN 178
+G C+ G CELC+P Y C+PC CDP+GS
Sbjct: 369 SGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAACRPCDCDPMGSQ 421
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 12/159 (7%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C T G C+ C GYFGDA+ +C+PC+C I G+ F+ C TG
Sbjct: 879 SGSCLICKPGTTGRYCELCADGYFGDAVNTK--NCQPCRCDINGS-----FSEDCHTRTG 931
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G +CD+C+ + + G GC C+C+ GS + C+ +GQC C+PGV G
Sbjct: 932 QCECRPNVQGRHCDECKPETFGLQLGRGCLPCNCNSFGSKSFDCEA-SGQCWCQPGVAGK 990
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N CDP +GQC
Sbjct: 991 KCDRCAHGYFNFQEGGCIACDCSHLGNN---CDPKTGQC 1026
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 14/170 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
TG+CL C +TGGP C+ CLPG++GD DC+PC C P + + F+P C D+
Sbjct: 766 TGECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCAC--PLNIPSNNFSPTCHLDRS 823
Query: 89 TGQC--SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPV--GSLNRTCDPITGQCL 142
G C G C++C G++ + G C+ C C+ S+ +CD ++G CL
Sbjct: 824 LGLICDECPIGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDYSIPGSCDSLSGSCL 883
Query: 143 -CRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDP-SGQC 188
C+PG TG CELC ++G +++ C+PC CD GS S C +GQC
Sbjct: 884 ICKPGTTGRYCELCADGYFGDAVNTKNCQPCRCDINGSFSEDCHTRTGQC 933
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
T C C ++T G C+ C GY+G LP DC+PC C P + F+P C L G
Sbjct: 1429 TSVCQNCQHHTAGDFCERCALGYYGIVRGLP-NDCQPCAC--PLISPSNNFSPSC-VLEG 1484
Query: 91 ----QCSCKPH-VVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ P G C++C G+ S G C+ C+CDP GSL CD +TG C C
Sbjct: 1485 LEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCTC 1544
Query: 144 RPGVTGTRCELCQPNH 159
RPG TG +C+ C+ H
Sbjct: 1545 RPGATGRKCDGCEHWH 1560
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 41 TGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
G +CD C GYF +G C C C G CD TGQC C P+ G
Sbjct: 987 VAGKKCDRCAHGYFN----FQEGGCIACDCSHLGN--------NCDPKTGQCICPPNTTG 1034
Query: 101 TNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
C +C + GCK C+C VGSL C+ TGQC C P +G +C C H+
Sbjct: 1035 EKCSECLPNTWGHSIVTGCKVCNCSTVGSLASQCNVNTGQCSCHPKFSGMKCSECSRGHW 1094
Query: 161 GFSLDGCKPCMCDPIGSNSLQCD 183
+ L C C C G+++ CD
Sbjct: 1095 NYPL--CTLCDCFLPGTDATTCD 1115
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C CLP +G ++ C+ C C G+L ++ C+ TG
Sbjct: 1023 TGQCI-CPPNTTGEKCSECLPNTWGHSIVT---GCKVCNCSTVGSLASQ-----CNVNTG 1073
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD---------PITGQC 141
QCSC P G C +C GH+N C CDC G+ TCD TGQC
Sbjct: 1074 QCSCHPKFSGMKCSECSRGHWNY---PLCTLCDCFLPGTDATTCDLETRKCSCSDQTGQC 1130
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G C+ C+P +G GC C C
Sbjct: 1131 SCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYC 1164
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-------DCEPCQCYIPGTL-----ETE 79
G C+ C +NT G C+TC+ G+F PKG C+PC C G+L + E
Sbjct: 372 GVCINCTHNTAGINCETCVDGFF-----RPKGVSPNYPRPCQPCHCDPTGSLSEVCVKDE 426
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
+ + G C CK G NCD+C G++ C+ C+C +GS N DP G
Sbjct: 427 KYAQRGLK-PGSCHCKTGFGGVNCDRCVRGYHGY---PDCQPCNCSGLGSTNE--DPCVG 480
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSN 178
C C+ V G C C+ + D GC+ C C + +
Sbjct: 481 PCSCKENVEGEDCSRCKSGFFNLQEDNQKGCEECFCSGVSNR 522
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 31/173 (17%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPC-------QCYIPGTLETETFT-P 83
+C +NT G CD C PG+ + L K +CE C +CY T+ + +
Sbjct: 304 ECEHNTCGESCDRCCPGFHQKPWRAGTFLTKSECEACNCHGKAEECYYDETVASRNLSLN 363
Query: 84 VCDQLTGQ---CSCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRTCD 135
+ + G +C + G NC+ C G + C+ C CDP GSL+ C
Sbjct: 364 IHGKYIGGGVCINCTHNTAGINCETCVDGFFRPKGVSPNYPRPCQPCHCDPTGSLSEVCV 423
Query: 136 PIT---------GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
G C C+ G G C+ C ++G+ C+PC C +GS +
Sbjct: 424 KDEKYAQRGLKPGSCHCKTGFGGVNCDRCVRGYHGYP--DCQPCNCSGLGSTN 474
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 65/161 (40%), Gaps = 28/161 (17%)
Query: 43 GPQCDTCLPGYF-------GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SC 94
G C+TC PG++ G G C PCQC + CD T C +C
Sbjct: 1384 GLSCETCAPGFYRLRSEPGGRTPGPTLGTCVPCQC--------NGHSSQCDPETSVCQNC 1435
Query: 95 KPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPITGQCL-------CRP 145
+ H G C++C +G+Y I+ G C+ C C + N + L C
Sbjct: 1436 QHHTAGDFCERCALGYYGIVRGLPNDCQPCACPLISPSNNFSPSCVLEGLEDYRCTACPR 1495
Query: 146 GVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCD 183
G G CE C P + G C+ C CDP GS + CD
Sbjct: 1496 GYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCD 1536
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET----ETFTPVC 85
TG C C G +C C G++ L C C C++PGT T ET C
Sbjct: 1071 NTGQC-SCHPKFSGMKCSECSRGHWNYPL------CTLCDCFLPGTDATTCDLETRKCSC 1123
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGS 129
TGQCSCK +V G +CD+C G + + + GC SC C V S
Sbjct: 1124 SDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYCFGVTS 1169
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG----------CKSCDCDPVGSLNRTCDP 136
L +C C P G +C+ C G Y + S G C C C+ S CDP
Sbjct: 1371 HLIERCDCPPGYSGLSCETCAPGFYRLRSEPGGRTPGPTLGTCVPCQCNGHSS---QCDP 1427
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQCDPS 185
T C C+ G CE C +YG + C+PC C P+ S S PS
Sbjct: 1428 ETSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCAC-PLISPSNNFSPS 1479
>sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN=Lama4 PE=1 SV=2
Length = 1816
Score = 107 bits (266), Expect = 7e-23, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C NT G C+ CL GY GD++ C+PC C +P F C + G
Sbjct: 95 SGFCLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPCPCPLP---HLANFAESCYRKNG 151
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLN---RTCDPITGQCL- 142
+C CK + VG NC++C G+Y ++ G CK CDC N CD ITGQC
Sbjct: 152 AVRCICKENYVGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEITGQCRN 211
Query: 143 CRPGVTGTRCELCQPNHYG--FSLDGCKPCMC--DPIGSNSLQCDPSG 186
C TG +CE C P +YG + C C C P S + +C G
Sbjct: 212 CLRNTTGFKCERCAPGYYGDARTAKNCAVCNCGGGPCDSVTGECLEEG 259
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCK 95
C N GP C+ C PGY+G+ L L C+ C C G + CD++TGQC +C
Sbjct: 157 CKENYVGPNCERCAPGYYGNPL-LIGSTCKKCDC--SGNSDPNLIFEDCDEITGQCRNCL 213
Query: 96 PHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
+ G C++C G+Y + + + C C+C CD +TG+CL T C+
Sbjct: 214 RNTTGFKCERCAPGYYGDARTAKNCAVCNCG-----GGPCDSVTGECLEEGFEVPTGCDK 268
Query: 155 C 155
C
Sbjct: 269 C 269
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P+ I + TG C C+ NT G +C+ C PGY+GDA +C C C
Sbjct: 195 PNLIFEDCDEITGQCRNCLRNTTGFKCERCAPGYYGDART--AKNCAVCNCG-------- 244
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQC 106
CD +TG+C + V T CD+C
Sbjct: 245 --GGPCDSVTGECLEEGFEVPTGCDKC 269
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP---VCDQ 87
TG CL+C+++T GP C C PG+ G A + C C C + GT + +P CD
Sbjct: 1004 TGQCLRCLHHTEGPHCAHCKPGFHGQA---ARQSCHRCTCNLLGTNPQQCPSPDQCHCDP 1060
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+GQC C P+V G +CD+C +N+ SG GC+ C C P + TC+ TGQC CR G
Sbjct: 1061 SSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSRARGPTCNEFTGQCHCRAGF 1120
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
G C CQ H+G C C CD G ++ QC +G C PGV
Sbjct: 1121 GGRTCSECQELHWGDPGLQCHACDCDSRGIDTPQCHRFTGHCSCRPGV 1168
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-------DCEPCQCYIPGTLETETFTPV 84
G C C +NT G C+ C P ++ D + DC+P G ++ P
Sbjct: 372 GVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRCDSHD-DPA 430
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHY--NIISGEGCKSCDCDPVGSL--NRTCDPITGQ 140
++GQC CK HVVGT C QC G + +I GC+ C C+ G++ + CDP +G
Sbjct: 431 LGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVPGSTPCDPNSGS 490
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDP-SGQC 188
C C+ VTG C+ C P H+G S D GC+PC CD G+ QCD +GQC
Sbjct: 491 CYCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEGTGQC 541
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PCQC G+L +E C+ GQC CKP VVG CD C G+Y GC++C C
Sbjct: 782 PCQCNPQGSLSSE-----CNPHGGQCLCKPGVVGRRCDLCAPGYYGF-GPTGCQACQCSH 835
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCD 173
G+L+ C+ +GQCLCR G G RC+ CQ +GF C+PC+C+
Sbjct: 836 EGALSSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFP--SCRPCVCN 880
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G C +C + G +C C G+FG +++ G C CQC GT+ T CD +
Sbjct: 434 VSGQC-RCKEHVVGTRCQQCRDGFFGLSISDRLG-CRRCQCNARGTVPGST---PCDPNS 488
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G C CK V G CD+C GH+ + GC+ CDCD G+L+ CD TGQC CR +
Sbjct: 489 GSCYCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEGTGQCHCRQHMV 548
Query: 149 GTRCELCQPNHYGFSLD 165
G RCE QP ++ LD
Sbjct: 549 GRRCEQVQPGYFRPFLD 565
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQLT 89
TG CL C +TGG C+ C+ G+ GD G C PC C PG+ + D+ +
Sbjct: 890 TGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHQDEYS 949
Query: 90 GQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDC----DPVGSLNRTCDPITGQC 141
Q C C+ G C+ C GH+ S G C+ C+C DP+ CDP TGQC
Sbjct: 950 QQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDP--DACDPHTGQC 1007
Query: 142 L-CRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ--------CDP-SGQCP 189
L C G C C+P +G + C C C+ +G+N Q CDP SGQCP
Sbjct: 1008 LRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTCNLLGTNPQQCPSPDQCHCDPSSGQCP 1066
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C C+P GSL+ C+P GQCLC+PGV G RC+LC P +YGF GC+ C C G+
Sbjct: 779 GALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEGA 838
Query: 178 NSLQCDP-SGQC 188
S C+ SGQC
Sbjct: 839 LSSLCEKTSGQC 850
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 68/146 (46%), Gaps = 21/146 (14%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G CL C G +CD C PGY+G P G C+ CQC G L + +C++ +GQ
Sbjct: 800 GQCL-CKPGVVGRRCDLCAPGYYGFG---PTG-CQACQCSHEGALSS-----LCEKTSGQ 849
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGT 150
C C+ G CD+C+ G + S C+ C C+ C+ TG CL CR G
Sbjct: 850 CLCRTGAFGLRCDRCQRGQWGFPS---CRPCVCNGHAD---ECNTHTGACLGCRDHTGGE 903
Query: 151 RCELCQPNHYG---FSLDG-CKPCMC 172
CE C +G G C+PC C
Sbjct: 904 HCERCIAGFHGDPRLPYGGQCRPCPC 929
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII-------SGEGCKSCDCDPVGSLNRTCDPITGQ 140
+ G C CK + G NC+QC+ + ++ C+ C+C +C
Sbjct: 306 VHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGHSHACRKCECH---GHTHSCHFDMAV 362
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPC--------MCDPIGSNSLQCDPSG 186
L V+G C+ CQ N G + C+P + DP S CDP G
Sbjct: 363 YLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMG 416
>sp|Q16363|LAMA4_HUMAN Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4
Length = 1823
Score = 105 bits (261), Expect = 3e-22, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C NT G C+ CL GY GD++ C+PC C +P F C + G
Sbjct: 95 SGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCPLP---HLANFAESCYRKNG 151
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLN---RTCDPITGQCL- 142
+C C + G NC++C G+Y ++ G CK CDC N CD +TGQC
Sbjct: 152 AVRCICNENYAGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRN 211
Query: 143 CRPGVTGTRCELCQPNHYGFS--LDGCKPCMC--DPIGSNSLQCDPSGQCPGVFMNRAEM 198
C TG +CE C P +YG + C C C P S + +C G P M+ +
Sbjct: 212 CLRNTTGFKCERCAPGYYGDARIAKNCAVCNCGGGPCDSVTGECLEEGFEPPTGMDCPTI 271
Query: 199 SSD 201
S D
Sbjct: 272 SCD 274
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P+ I + TG C C+ NT G +C+ C PGY+GDA +C C C
Sbjct: 195 PNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARI--AKNCAVCNCG-------- 244
Query: 80 TFTPVCDQLTGQC 92
CD +TG+C
Sbjct: 245 --GGPCDSVTGEC 255
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C G +CD C PG+ G A PKG C C C I G + C++ TG
Sbjct: 393 TGQCV-CKEYVQGERCDLCKPGFTGLTFANPKG-CHACDCSILGARKDMP----CEEETG 446
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C P+VVG CDQC H+ + SG GC+ C CDP SL+ C+ TGQC CR G G
Sbjct: 447 RCLCLPNVVGPKCDQCAPSHWKLASGLGCEPCACDPRNSLSSQCNQFTGQCPCREGFGGL 506
Query: 151 RC-----ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C C YG GC+ C CD G+ CD SG+C
Sbjct: 507 TCSSAAIRQCPDQTYGHVATGCRACDCDFRGTEGPGCDKASGRC 550
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 23 ILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETE 79
+ + GT G C C +T G C+ C YF + A C PC+C G ++
Sbjct: 328 VFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPIHETCIPCECDPDGAVQGA 387
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT-CDP 136
CD+LTGQC CK +V G CD C+ G + +GC +CDC +G+ C+
Sbjct: 388 P----CDRLTGQCVCKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSILGARKDMPCEE 443
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQCP 189
TG+CLC P V G +C+ C P+H+ + GC+PC CDP S S QC+ +GQCP
Sbjct: 444 ETGRCLCLPNVVGPKCDQCAPSHWKLASGLGCEPCACDPRNSLSSQCNQFTGQCP 498
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKG----DCEPCQCYIPGTLETETFTPVCDQLT--- 89
C +NT GP CD C P Y +G +C+ C C G ET F P +
Sbjct: 278 CQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQRCDCN--GHSETCHFDPAVFAASQGT 335
Query: 90 --GQC-SCKPHVVGTNCDQCEVGHYNIIS-----GEGCKSCDCDPVGSLNRT-CDPITGQ 140
G C +C+ H G NC++C++ ++ E C C+CDP G++ CD +TGQ
Sbjct: 336 NGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPIHETCIPCECDPDGAVQGAPCDRLTGQ 395
Query: 141 CLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNS 179
C+C+ V G RC+LC+P G + GC C C +G+
Sbjct: 396 CVCKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSILGARK 437
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 34/119 (28%)
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYN--IISGEG-----CKSCDC---------DPV--- 127
Q+ C C+ + G NCD+C + N EG C+ CDC DP
Sbjct: 271 QVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQRCDCNGHSETCHFDPAVFA 330
Query: 128 ---GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL------DGCKPCMCDPIGS 177
G+ CD CR G CE CQ +++ + C PC CDP G+
Sbjct: 331 ASQGTNGGVCDN------CRDHTEGKNCERCQLHYFRNRRPSAPIHETCIPCECDPDGA 383
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 19/182 (10%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE 77
G P+ + TG C C+ +T GP+C+ C PG++G+AL LP G+C C C
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNAL-LP-GNCTRCDC------- 2025
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
T T CD +G C CK V G CD+C+ GH+ GC+ C C P C P
Sbjct: 2026 TPCGTEACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAE-GSECHPQ 2084
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFM 193
+GQC CRPG G +C C P ++G GC+ C C P G +CDP +G+C PG+
Sbjct: 2085 SGQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG----RCDPHTGRCNCPPGLSG 2139
Query: 194 NR 195
R
Sbjct: 2140 ER 2141
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 27 VAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD 86
+ G CL C G C+ C PG+FG+ L L C+PC C G + CD
Sbjct: 1930 LRGGRTQCL-CKPGYAGASCERCAPGFFGNPLVL-GSSCQPCDC--SGNGDPNLLFSDCD 1985
Query: 87 QLTGQCS-CKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
LTG C C H G C+ C G Y N + C CDC P G+ CDP +G CLC+
Sbjct: 1986 PLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGT--EACDPHSGHCLCK 2043
Query: 145 PGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDP-SGQC 188
GVTG RC+ CQ H+GF GC+PC C P S +C P SGQC
Sbjct: 2044 AGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS-ECHPQSGQC 2088
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 82/159 (51%), Gaps = 20/159 (12%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C G CD C PGYF L C+ C C GTL CD+ G
Sbjct: 557 TGQC-RCRVGFEGATCDRCAPGYFHFPL------CQLCGCSPAGTLPEG-----CDE-AG 603
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C+P G +CD+C G++ + C++C CDP G+L++ C G C CRPG TGT
Sbjct: 604 RCLCQPEFAGPHCDRCRPGYHGFPN---CQACTCDPRGALDQLCG-AGGLCRCRPGYTGT 659
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ C P +GF C PC C GS CDP SGQC
Sbjct: 660 ACQECSPGFHGFP--SCVPCHCSAEGSLHAACDPRSGQC 696
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 82/172 (47%), Gaps = 27/172 (15%)
Query: 26 SVAGTTGDCLK---------CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL 76
S AGT G+ + C N G C+ C PG++G C+PCQC PG
Sbjct: 497 SAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYGPG-------CQPCQCSSPGVA 549
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
+ CD TGQC C+ G CD+C G+++ C+ C C P G+L CD
Sbjct: 550 DDR-----CDPDTGQCRCRVGFEGATCDRCAPGYFHFPL---CQLCGCSPAGTLPEGCDE 601
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
G+CLC+P G C+ C+P ++GF C+ C CDP G+ C G C
Sbjct: 602 -AGRCLCQPEFAGPHCDRCRPGYHGFP--NCQACTCDPRGALDQLCGAGGLC 650
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 33/180 (18%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C ++T G C+ CLPG++ L P C C C E++ C+ L
Sbjct: 391 GVCIDCQHHTTGVNCERCLPGFYRSPNHPLDSPH-VCRRCNC------ESDFTDGTCEDL 443
Query: 89 TGQCSCKPHVVGTNCDQCEVG-----------------HYNIISGEGCKSCDCDPVGSLN 131
TG+C C+P+ G CD C G ++ +CDC G+
Sbjct: 444 TGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQG 503
Query: 132 RTC--DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C DP G+CLC+P GT CELC P YG GC+PC C G +CDP +GQC
Sbjct: 504 NACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVADDRCDPDTGQC 560
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C + GP CD C PG++G + + P+G C C C + GTL C TGQC CKP
Sbjct: 746 CRAHVEGPSCDRCKPGFWGLSPSNPEG-CTRCSCDLRGTLGG---VAECQPGTGQCFCKP 801
Query: 97 HVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
HV G C C+ G + + + GC+SC CD G+L ++C+P TG C CRP G C
Sbjct: 802 HVCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQSCEPRTGVCRCRPNTQGPTCSE 861
Query: 155 CQPNHY 160
+HY
Sbjct: 862 PARDHY 867
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 76/172 (44%), Gaps = 24/172 (13%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFG--------------DALALPKGDCEPCQCYIPGTL 76
TG C C N G +CD C G+ G LP G C C GT
Sbjct: 444 TGRCY-CRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQ 502
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
D G+C CKP+ GT+C+ C G Y G GC+ C C G + CDP
Sbjct: 503 GNACRK---DPRVGRCLCKPNFQGTHCELCAPGFY----GPGCQPCQCSSPGVADDRCDP 555
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TGQC CR G G C+ C P ++ F L C+ C C P G+ CD +G+C
Sbjct: 556 DTGQCRCRVGFEGATCDRCAPGYFHFPL--CQLCGCSPAGTLPEGCDEAGRC 605
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
LC P+ L G CL C GP CD C PGY G P +C+ C C G
Sbjct: 586 LCGCSPAGTLPEGCDEAGRCL-CQPEFAGPHCDRCRPGYHG----FP--NCQACTCDPRG 638
Query: 75 TLETETFTPVCDQL---TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLN 131
L DQL G C C+P GT C +C G + S C C C GSL+
Sbjct: 639 AL---------DQLCGAGGLCRCRPGYTGTACQECSPGFHGFPS---CVPCHCSAEGSLH 686
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
CDP +GQC CRP VTG RC+ C P Y F C+ C P G
Sbjct: 687 AACDPRSGQCSCRPRVTGLRCDTCVPGAYNFPY--CEAGSCHPAG 729
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C T P C C P FG P CE C C PG E P CD +G
Sbjct: 1495 TGQCI-CPPRTIPPDCLLCQPQTFG---CHPLVGCEECNCSGPGI--QELTDPTCDTDSG 1548
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G CD C G + C+ CDC G+ CDP+TGQC C+ V G
Sbjct: 1549 QCKCRPNVTGRRCDTCSPGFHGYPR---CRPCDCHEAGTAPGVCDPLTGQCYCKENVQGP 1605
Query: 151 RCELCQPNHYGFSLDGCKPCMC 172
+C+ C FSLD P C
Sbjct: 1606 KCDQCSLG--TFSLDAANPKGC 1625
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C + G C C GY+G P +C PC C +CD+LTGQC C P
Sbjct: 1459 CHAHVIGRDCSRCATGYWG----FP--NCRPCDC----------GARLCDELTGQCICPP 1502
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGS---LNRTCDPITGQCLCRPGVTGTRCE 153
+ +C C+ + GC+ C+C G + TCD +GQC CRP VTG RC+
Sbjct: 1503 RTIPPDCLLCQPQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCD 1562
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C P +G+ C+PC C G+ CDP +GQC
Sbjct: 1563 TCSPGFHGYPR--CRPCDCHEAGTAPGVCDPLTGQC 1596
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CDTC+PG + CE C+ G + P +
Sbjct: 693 SGQC-SCRPRVTGLRCDTCVPGAYNFPY------CEAGSCHPAGLAPVD---PALPEAQV 742
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLN--RTCDPITGQCLCRPG 146
C C+ HV G +CD+C+ G + + EGC C CD G+L C P TGQC C+P
Sbjct: 743 PCMCRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPH 802
Query: 147 VTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDP 184
V G C C+ +G GC+ C CD G+ C+P
Sbjct: 803 VCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQSCEP 843
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 61/130 (46%), Gaps = 20/130 (15%)
Query: 65 CEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC 124
PC C+ E P C+ GQC C HV+G +C +C G++ + C+ CDC
Sbjct: 1435 ARPCGCH-----EVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFPN---CRPCDC 1486
Query: 125 DPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQCD 183
R CD +TGQC+C P C LCQP +G L GC+ C C G L D
Sbjct: 1487 G-----ARLCDELTGQCICPPRTIPPDCLLCQPQTFGCHPLVGCEECNCSGPGIQEL-TD 1540
Query: 184 P-----SGQC 188
P SGQC
Sbjct: 1541 PTCDTDSGQC 1550
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 95/239 (39%), Gaps = 62/239 (25%)
Query: 8 VSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP 67
V + + L V P+ ++A CL C + G C C PG++ D L G C P
Sbjct: 1806 VFLRRVALEVASPAG-QGALASNVELCL-CPASYRGDSCQECAPGFYRDVKGLFLGRCVP 1863
Query: 68 CQCY------IPG-----------------------------------------TLETET 80
CQC+ +PG ++ +
Sbjct: 1864 CQCHGHSDRCLPGSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNN 1923
Query: 81 FTPVCDQLTG--QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLN---RT 133
F C G QC CKP G +C++C G + ++ G C+ CDC G N
Sbjct: 1924 FAEGCVLRGGRTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSD 1983
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
CDP+TG C C TG RCE+C P YG +L C C C P G+ + CDP SG C
Sbjct: 1984 CDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEA--CDPHSGHC 2040
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 32/175 (18%)
Query: 37 CIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
C +NT G CD C PG+ + A A +C+ C CY G + P D+
Sbjct: 324 CQHNTCGGTCDRCCPGFNQQPWKPATANSANECQSCNCY--GHATDCYYDPEVDRRRASQ 381
Query: 93 S-------------CKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTC 134
S C+ H G NC++C G Y + S C+ C+C+ + + TC
Sbjct: 382 SLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSPNHPLDSPHVCRRCNCESDFT-DGTC 440
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL--QCDPSGQ 187
+ +TG+C CRP +G RC++C GF C P SN Q P+GQ
Sbjct: 441 EDLTGRCYCRPNFSGERCDVCAEGFTGF-----PSCYPTPSSSNDTREQVLPAGQ 490
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM 171
++ G + C C VG+ TC+P GQC C V G C C ++GF C+PC
Sbjct: 1428 SLFYNNGARPCGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFP--NCRPCD 1485
Query: 172 C 172
C
Sbjct: 1486 C 1486
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 18/167 (10%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD+C ++G LP CE C C G+ VCD TG
Sbjct: 760 SGQC-ACKKEAKGLKCDSCRENFYG----LPWSACEVCDCSKAGSQPGT----VCDTETG 810
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKP+V G C QC+ G++N+ + C +C+C+ +G++N + CD TGQC C+ G
Sbjct: 811 QCVCKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCKLG 870
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGS-NSLQCDP-SGQC 188
VTG RC C+P+ + ++D GC+ C CD +G+ CDP SGQC
Sbjct: 871 VTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQC 917
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 90/167 (53%), Gaps = 17/167 (10%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCYIPGTLETETFTPVCDQ 87
TG C+ C N GG QC C GYF L + D C C C GT+ CD+
Sbjct: 809 TGQCV-CKPNVGGRQCSQCKAGYFN----LYQNDSHLCLTCNCEKMGTVNGSL---RCDK 860
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL-NRTCDPITGQCLCR 144
TGQC CK V G C QC+ +N+ + +GC++CDCD +G+L CDPI+GQCLC
Sbjct: 861 STGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCL 920
Query: 145 PGVTGTRCELCQPNHYG--FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
P G RCE CQP Y + GC PC+C G+ S C+ +GQC
Sbjct: 921 PHRQGRRCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHICNSVTGQC 967
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C G QC C G++ D AL C PC C GT++ + C Q +GQCSCK
Sbjct: 661 CKRRVSGRQCLQCQDGFY-DLQALDPDGCRPCNCNPSGTVDGDI---TCHQNSGQCSCKA 716
Query: 97 HVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
+V+G C++C G + +G+GC+ C C+ GS+N+ CDP++GQC C+ G +C+
Sbjct: 717 NVIGLRCNRCNFGFKFLQSFNGDGCEPCQCNLHGSVNQLCDPLSGQCACKKEAKGLKCDS 776
Query: 155 CQPNHYGFSLDGCKPCMCDPIGSN 178
C+ N YG C+ C C GS
Sbjct: 777 CRENFYGLPWSACEVCDCSKAGSQ 800
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 19/174 (10%)
Query: 29 GTTGDCLKCIYNTG---------GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
GT L+C +TG G +C C P F + P+G C+ C C GTL
Sbjct: 850 GTVNGSLRCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQG-CQACDCDSLGTLPGS 908
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIIS-GEGCKSCDCDPVGSLNRTCDPIT 138
+CD ++GQC C PH G C+QC+ G Y+ S GC C C G+++ C+ +T
Sbjct: 909 ----MCDPISGQCLCLPHRQGRRCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHICNSVT 964
Query: 139 GQCLCR-PGVTGTRCELCQPNHYGFS-LDG-CKPCMCDPIGSNSLQCDP-SGQC 188
GQC C P TG C CQ +++ F L G C+PC C G+++ CD +GQC
Sbjct: 965 GQCSCHDPSTTGRSCHQCQESYFRFDPLTGRCRPCHCHVAGASNGTCDAVTGQC 1018
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 91/178 (51%), Gaps = 19/178 (10%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG--DCEPCQCYIPGTLETETF 81
L+ G G C C ++T G C++C ++ A P C+ C C GT
Sbjct: 592 LEHNRGGGGVCDDCQHHTTGRHCESCQDYFYRPVGADPAAPDACKLCDCNRAGTRNGSLH 651
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSL--NRTCDPI 137
CD + GQC CK V G C QC+ G Y++ + +GC+ C+C+P G++ + TC
Sbjct: 652 ---CDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRPCNCNPSGTVDGDITCHQN 708
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSL------DGCKPCMCDPIGSNSLQCDP-SGQC 188
+GQC C+ V G RC C ++GF DGC+PC C+ GS + CDP SGQC
Sbjct: 709 SGQCSCKANVIGLRCNRC---NFGFKFLQSFNGDGCEPCQCNLHGSVNQLCDPLSGQC 763
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C+ + G +C+ C PG++ C PC C+ G + + +C+ +TG
Sbjct: 914 SGQCL-CLPHRQGRRCEQCQPGFYSSPSN--ATGCLPCLCHTAGAV-----SHICNSVTG 965
Query: 91 QCSCK-PHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
QCSC P G +C QC+ ++ ++G C+ C C G+ N TCD +TGQC C+ V
Sbjct: 966 QCSCHDPSTTGRSCHQCQESYFRFDPLTGR-CRPCHCHVAGASNGTCDAVTGQCFCKEFV 1024
Query: 148 TGTRCELCQP 157
TG++C+ C P
Sbjct: 1025 TGSKCDTCVP 1034
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 41 TGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS--- 93
T GPQCD C P Y F + +C+PCQC+ G + + D + +
Sbjct: 541 TEGPQCDRCSPLYNDKPFRSGDNVNAFNCKPCQCH--GHASSCHYDASVDPFPLEHNRGG 598
Query: 94 ------CKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRT--CDPITGQ 140
C+ H G +C+ C+ Y + + CK CDC+ G+ N + CDPI GQ
Sbjct: 599 GGVCDDCQHHTTGRHCESCQDYFYRPVGADPAAPDACKLCDCNRAGTRNGSLHCDPIGGQ 658
Query: 141 CLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGS 177
C C+ V+G +C CQ Y DGC+PC C+P G+
Sbjct: 659 CDCKRRVSGRQCLQCQDGFYDLQALDPDGCRPCNCNPSGT 698
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 93/182 (51%), Gaps = 19/182 (10%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE 77
G P+ I TG C C+ +T GP C+ C PG++G+AL LP G+C C C GT
Sbjct: 1977 GDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYGNAL-LP-GNCTRCDCSPCGT-- 2032
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
CD +G+C CK V G CD+C G++ +GC+ C C P C P
Sbjct: 2033 -----ETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAK-GSECHPQ 2086
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFM 193
+GQC C+PG TG +C C P ++G GC+ C C P G CDP +G C PG+
Sbjct: 2087 SGQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG----HCDPHTGHCTCPPGLSG 2141
Query: 194 NR 195
R
Sbjct: 2142 ER 2143
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C T P C C P FG P CE C C PG E P CD +G
Sbjct: 1500 TGQCI-CPPRTVPPDCLVCQPQSFG---CHPLVGCEECNCSGPGV--QELTDPTCDMDSG 1553
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G CD C G Y S C+ CDC G++ CDP+TGQC C+ V G+
Sbjct: 1554 QCRCRPNVAGRRCDTCAPGFYGYPS---CRPCDCHEAGTMASVCDPLTGQCHCKENVQGS 1610
Query: 151 RCELCQPNHYGFSLDGCKPCMC 172
RC+ C+ FSLD P C
Sbjct: 1611 RCDQCRVG--TFSLDAANPKGC 1630
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
GP CD CLPGY G DC C C G L+ + C + G C C+P G
Sbjct: 619 GPHCDRCLPGYHGYP------DCHACACDPRGALDQQ-----CG-VGGLCHCRPGYTGAT 666
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
C +C G Y S C C C GSL+ TCDP TGQC CRP VTG C++C P Y F
Sbjct: 667 CQECSPGFYGFPS---CIPCHCSADGSLHTTCDPTTGQCRCRPRVTGLHCDMCVPGAYNF 723
Query: 163 SLDGCKPCMCDPIG 176
C+ C P G
Sbjct: 724 PY--CEAGSCHPAG 735
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 65/218 (29%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY-------------------------FGDALALPKG-- 63
+G C+ C +NT G QC+ C PG+ F D L G
Sbjct: 1878 SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLAVPSNNFADGCVLRNGRT 1937
Query: 64 -----------------------------DCEPCQCYIPGTLETETFTPVCDQLTGQCS- 93
C+PC C G + CD LTG C
Sbjct: 1938 QCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDC--SGNGDPNMIFSDCDPLTGACRG 1995
Query: 94 CKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
C H G +C++C G Y N + C CDC P G+ TCDP +G+CLC+ GVTG RC
Sbjct: 1996 CLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSPCGT--ETCDPQSGRCLCKAGVTGQRC 2053
Query: 153 ELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDP-SGQC 188
+ C ++GF GC+PC C P S +C P SGQC
Sbjct: 2054 DRCLEGYFGFEQCQGCRPCACGPAAKGS-ECHPQSGQC 2090
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 82/180 (45%), Gaps = 32/180 (17%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFG--DALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
G CL C ++T G C+ CLPG+F D C PC C E++ C+ LT
Sbjct: 396 GVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPCDC------ESDFTDGTCEDLT 449
Query: 90 GQCSCKPHVVGTNCDQCEVGHYN------------------IISGEGCKSCDCDPVGSLN 131
G+C C+P+ G C C G+ + ++ +CDC+ G+
Sbjct: 450 GRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQG 509
Query: 132 RTC--DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C DP G+C+C+P G CELC P +G S C PC C G + CDP SGQC
Sbjct: 510 NACRKDPRLGRCVCKPNFRGAHCELCAPGFHGPS---CHPCQCSSPGVANSLCDPESGQC 566
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G C C PG++G P C PC C G+L T CD TGQC C+P V G +
Sbjct: 664 GATCQECSPGFYG----FP--SCIPCHCSADGSLHT-----TCDPTTGQCRCRPRVTGLH 712
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVG--SLNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
CD C G YN C++ C P G N C+CR V G C+ C+P ++
Sbjct: 713 CDMCVPGAYNFPY---CEAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYW 769
Query: 161 GFSL---DGCKPCMCDPIGS--NSLQCDPSGQC 188
G S +GC C CDP G+ +C +GQC
Sbjct: 770 GLSASNPEGCTRCSCDPRGTLGGVTECQGNGQC 802
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C + GP CD C PGY+G + + P+G C C C GTL T Q GQC CK
Sbjct: 752 CRAHVEGPSCDRCKPGYWGLSASNPEG-CTRCSCDPRGTLGGVTEC----QGNGQCFCKA 806
Query: 97 HVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
HV G C C+ G + + + GC+SC CD G+L + C+P TG C CRP G C
Sbjct: 807 HVCGKTCAACKDGFFGLDYADYFGCRSCRCDVGGALGQGCEPKTGACRCRPNTQGPTCSE 866
Query: 155 CQPNHY 160
+HY
Sbjct: 867 PAKDHY 872
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G C C GY+G P +C PC C +CD+LTGQC C P V +
Sbjct: 1470 GRDCSRCATGYWG----FP--NCRPCDC----------GARLCDELTGQCICPPRTVPPD 1513
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVGS---LNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
C C+ + GC+ C+C G + TCD +GQC CRP V G RC+ C P
Sbjct: 1514 CLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGF 1573
Query: 160 YGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
YG+ C+PC C G+ + CDP +GQC
Sbjct: 1574 YGYP--SCRPCDCHEAGTMASVCDPLTGQC 1601
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 60 LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC 119
LP G C C GT D G+C CKP+ G +C+ C G + G C
Sbjct: 492 LPAGQIVNCDCNAAGTQGNACRK---DPRLGRCVCKPNFRGAHCELCAPGFH----GPSC 544
Query: 120 KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
C C G N CDP +GQC+CR G G RC+ C ++ F L C+ C C P G+
Sbjct: 545 HPCQCSSPGVANSLCDPESGQCMCRTGFEGDRCDHCALGYFHFPL--CQLCGCSPAGTLP 602
Query: 180 LQCDPSGQC 188
CD +G+C
Sbjct: 603 EGCDEAGRC 611
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C +C G CD C+PG A P CE C+ G P +
Sbjct: 698 TTGQC-RCRPRVTGLHCDMCVPG----AYNFPY--CEAGSCHPAGLAPA---NPALPETQ 747
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCD-PITGQCLCRPG 146
C C+ HV G +CD+C+ G++ + + EGC C CDP G+L + GQC C+
Sbjct: 748 APCMCRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAH 807
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPS 185
V G C C+ +G GC+ C CD G+ C+P
Sbjct: 808 VCGKTCAACKDGFFGLDYADYFGCRSCRCDVGGALGQGCEPK 849
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 27/173 (15%)
Query: 37 CIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ- 91
C +NT G CD C PG+ + A +C+ C C+ G + P D+
Sbjct: 329 CQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCH--GHAYDCYYDPEVDRRNASQ 386
Query: 92 ------------CSCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTC 134
C+ H G NC++C G + + S C+ CDC+ + + TC
Sbjct: 387 NQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPCDCESDFT-DGTC 445
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQ 187
+ +TG+C CRP TG C C + F C P P Q P+GQ
Sbjct: 446 EDLTGRCYCRPNFTGELCAACAEGYTDFP--HCYPLPSFPHNDTREQVLPAGQ 496
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM 171
++ G C C VG+++ TC+P GQC CR V G C C ++GF C+PC
Sbjct: 1433 SLFYNNGALPCGCHEVGAVSPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFP--NCRPCD 1490
Query: 172 C 172
C
Sbjct: 1491 C 1491
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C T GPQC C PGY+G LP+ C CQC CD TG
Sbjct: 2087 SGQC-HCQPGTTGPQCLECAPGYWG----LPEKGCRRCQCP----------RGHCDPHTG 2131
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE 117
C+C P + G CD C H + G+
Sbjct: 2132 HCTCPPGLSGERCDTCSQQHQVPVPGK 2158
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 86/165 (52%), Gaps = 12/165 (7%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C+ C + G +CD C PG+ G A P+G C C C I G+ CD+ +
Sbjct: 395 VTGQCV-CKEHVQGERCDLCKPGFTGLTYANPQG-CHRCDCNILGSRRDMP----CDEES 448
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G+C C P+VVG CDQC H+ + SG+GC+ C CDP SL+ C+ TGQC CR G G
Sbjct: 449 GRCLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSLSPQCNQFTGQCPCREGFGG 508
Query: 150 TRC-----ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C C YG GC+ C CD G+ CD SG+C
Sbjct: 509 LMCSAAAIRQCPDRTYGDVATGCRACDCDFRGTEGPGCDKASGRC 553
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 89/181 (49%), Gaps = 19/181 (10%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL--ALPKGDCEPCQC----YIP 73
P+ S G C C +T G C+ C YF + A + C C+C +P
Sbjct: 329 PAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAVP 388
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLN 131
G CD +TGQC CK HV G CD C+ G + +GC CDC+ +GS
Sbjct: 389 GA--------PCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRR 440
Query: 132 RT-CDPITGQCLCRPGVTGTRCELCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CD +G+CLC P V G +C+ C P H+ S GC+PC CDP S S QC+ +GQC
Sbjct: 441 DMPCDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSLSPQCNQFTGQC 500
Query: 189 P 189
P
Sbjct: 501 P 501
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG----DCEPCQCYIPGTLETETF 81
S A D C +NT GP C+ C P Y +G +C+ C C G ET F
Sbjct: 270 STAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCN--GHSETCHF 327
Query: 82 TPVCDQLT-----GQC-SCKPHVVGTNCDQCEVGHY-NIISG----EGCKSCDCDPVGSL 130
P + G C +C+ H G NC++C++ ++ N G E C SC+CDP G++
Sbjct: 328 DPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPDGAV 387
Query: 131 -NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNS-LQCD-P 184
CDP+TGQC+C+ V G RC+LC+P G + GC C C+ +GS + CD
Sbjct: 388 PGAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEE 447
Query: 185 SGQC 188
SG+C
Sbjct: 448 SGRC 451
>sp|Q8K3K1|USH2A_RAT Usherin OS=Rattus norvegicus GN=Ush2a PE=1 SV=1
Length = 1512
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 91/167 (54%), Gaps = 18/167 (10%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C G +CD C ++G LP CE C C GT VCD TG
Sbjct: 759 SGQCV-CKKEAKGLRCDVCRENFYG----LPWSACEVCDCNRAGTQAGT----VCDAETG 809
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKP V G C +C+ G++N+ + C C+C+ G++N + CD TGQC C+ G
Sbjct: 810 QCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLG 869
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGS-NSLQCDP-SGQC 188
VTG RC C+P+ + ++D GC+ C CD +G+ CDP SGQC
Sbjct: 870 VTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQC 916
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 8/161 (4%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
GD C G +C C G++G AL C PC C GT++ + C +GQ
Sbjct: 655 GDQCDCKRRVSGRRCFRCHIGFYG-LQALDPDCCRPCDCNPSGTVDGDI---TCHHNSGQ 710
Query: 92 CSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
CSCK +V+G CD+C G + ++ +GC+ C C+ GS+N+ CDP++GQC+C+ G
Sbjct: 711 CSCKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKG 770
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNS-LQCDP-SGQC 188
RC++C+ N YG C+ C C+ G+ + CD +GQC
Sbjct: 771 LRCDVCRENFYGLPWSACEVCDCNRAGTQAGTVCDAETGQC 811
Score = 90.1 bits (222), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 86/163 (52%), Gaps = 16/163 (9%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCYIPGTLETETFTPVC 85
TG C+ C + GG +C C GYF L + D C PC C GT+ +C
Sbjct: 806 AETGQCV-CKPSVGGRRCSECKEGYFN----LRQNDSHLCLPCNCEKTGTVNGSL---LC 857
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL-NRTCDPITGQCL 142
D+ TGQC CK V G C QC+ +N+ + +GC++CDCD +G+L CDP++GQCL
Sbjct: 858 DKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQCL 917
Query: 143 CRPGVTGTRCELCQPNHYG--FSLDGCKPCMCDPIGSNSLQCD 183
C P RC CQP Y + GC PC+C + + + C+
Sbjct: 918 CLPHRQERRCVQCQPGCYSSPSNATGCLPCLCHTVATKNCICN 960
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCYIPGTLETET 80
L+ G G C C ++T G C++C YF + D C+ C C GT
Sbjct: 591 LEYNRGGGGVCDDCQHHTTGRNCESC-QDYFYRPIGADPADPEVCKHCDCNRDGTRNGSL 649
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSL--NRTCDP 136
+CD + QC CK V G C +C +G Y + + + C+ CDC+P G++ + TC
Sbjct: 650 ---LCDLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHH 706
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSL------DGCKPCMCDPIGSNSLQCDP-SGQC 188
+GQC C+ V G RC+ C +GF DGC+PC C+ GS + CDP SGQC
Sbjct: 707 NSGQCSCKANVIGLRCDRCS---FGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQC 762
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 41 TGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS--- 93
T GPQC C P Y F + +C+PCQC+ G + + D + +
Sbjct: 540 TEGPQCGRCSPLYNDKPFRSGNKVHAFNCKPCQCH--GHASSCHYDASMDPFPLEYNRGG 597
Query: 94 ------CKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRT--CDPITGQ 140
C+ H G NC+ C+ Y I E CK CDC+ G+ N + CD + Q
Sbjct: 598 GGVCDDCQHHTTGRNCESCQDYFYRPIGADPADPEVCKHCDCNRDGTRNGSLLCDLVGDQ 657
Query: 141 CLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGS 177
C C+ V+G RC C YG D C+PC C+P G+
Sbjct: 658 CDCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGT 697
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C+ + +C C PG + C PC C+ T +C+ +TG
Sbjct: 913 SGQCL-CLPHRQERRCVQCQPGCYSSPSN--ATGCLPCLCHTVATKNC-----ICNSVTG 964
Query: 91 QCSC-KPHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C C P G + QC+ ++ G C+ C C G+ N TCD +TGQC C+ VT
Sbjct: 965 HCYCPDPSTTGLSWHQCQDRYFRFDPLTGRCRPCHCHVAGASNGTCDAVTGQCFCKEFVT 1024
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDP 174
G++C+ C P ++ C P
Sbjct: 1025 GSKCDTCVPGASHLDVNNLLACSKTP 1050
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 101/213 (47%), Gaps = 58/213 (27%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL----------- 76
A TG C +C+ G CD C GY+ DA PK C+PC+C + GT+
Sbjct: 439 AEETGKC-ECLPRFVGEDCDQCASGYY-DA---PK--CKPCECNVNGTIGDVCLPEDGQC 491
Query: 77 -----------ET--ETFTPV------------------CDQLTGQCSCKPHVVGTNCDQ 105
ET + +T V C TGQC CKP G +CD+
Sbjct: 492 PCKAGFGGTFCETCADGYTNVTAGCVECVCDATGSEHGNCSASTGQCECKPAYAGLSCDK 551
Query: 106 CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD 165
C+VG++ G+ CK C+CDP+G+ CD TGQCLC+ G G +C+ C YG+
Sbjct: 552 CQVGYF----GDDCKFCNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP-- 605
Query: 166 GCKPCMCDPIGSNSLQCDP-SGQCP--GVFMNR 195
CK C CD G S +CD SGQCP G F R
Sbjct: 606 NCKACACDGAGITSPECDATSGQCPCNGNFTGR 638
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+GDC C NT G C++C ++GDA+ +C C+C G+ CD +
Sbjct: 1954 NSGDCYLCEQNTDGRHCESCAAWFYGDAVTAK--NCSSCECSQCGS-------QYCDNKS 2004
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G C CK +V G +CD+C+ H+ +GC+ C C + N C+ GQC CRPG TG
Sbjct: 2005 GGCECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCG-TAAFNTQCNVENGQCTCRPGATG 2063
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
RCE C+ ++ + GC C C+ S CD +GQC
Sbjct: 2064 MRCEHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQC 2103
Score = 84.0 bits (206), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 20 PSDILKSVAG----TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
PS + + G + G+ C + G CD C P ++ D + C C C + GT
Sbjct: 705 PSGVTRDFQGCDKVSPGELCSCRKHVTGRICDQCKPTFW-DLQYHHEDGCRSCDCNVNGT 763
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRT 133
+ + CD TGQC CK + G CDQC G Y + S GC+SC CD G+L
Sbjct: 764 I---SGLNTCDLKTGQCMCKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAE 820
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHY 160
CD +GQC CRP VTG RC+ NHY
Sbjct: 821 CDITSGQCKCRPRVTGLRCDQPIENHY 847
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
+ +TG C +C G CD C GYFGD DC+ C C GT VCDQ
Sbjct: 532 SASTGQC-ECKPAYAGLSCDKCQVGYFGD-------DCKFCNCDPMGTE-----GGVCDQ 578
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC CK G CD+C++ Y CK+C CD G + CD +GQC C
Sbjct: 579 TTGQCLCKEGFAGDKCDRCDIAFYGY---PNCKACACDGAGITSPECDATSGQCPCNGNF 635
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TG C+ C Y + C+ C C G+ CD +GQC
Sbjct: 636 TGRTCDKCAAGFYNYP--DCRGCECLLSGAKGQTCDSNGQC 674
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCK 95
+C N G CD C P ++G + +G C+ C C T F C+ GQC+C+
Sbjct: 2008 ECKINVEGDSCDRCKPDHWG--FSKCQG-CQGCHC------GTAAFNTQCNVENGQCTCR 2058
Query: 96 PHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
P G C+ CE G++N GE GC CDC+ S+ CD TGQC C+ G TG+RC+
Sbjct: 2059 PGATGMRCEHCEHGYWNY--GEHGCDKCDCEADLSMGTVCDVRTGQCHCQEGATGSRCDQ 2116
Query: 155 CQPNHYGFSLDGCKPC 170
C P++ GC+ C
Sbjct: 2117 CLPSYLRIPTYGCRRC 2132
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C C NT G C+ C GYF G P+ C+ C C + + T C +
Sbjct: 389 GVCKNCRENTEGVNCNKCSFGYFRPEGVTWNEPQ-PCKVCDC------DPDKHTGACAEE 441
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TG+C C P VG +CDQC G+Y+ CK C+C+ G++ C P GQC C+ G
Sbjct: 442 TGKCECLPRFVGEDCDQCASGYYD---APKCKPCECNVNGTIGDVCLPEDGQCPCKAGFG 498
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
GT CE C + + GC C+CD GS C S GQC
Sbjct: 499 GTFCETCADGYTNVTA-GCVECVCDATGSEHGNCSASTGQC 538
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCK 95
KC G +C+ C PGY+ P +C CQC CD+ TGQC C
Sbjct: 1435 KCKPGVIGRRCERCAPGYYN----FP--ECIKCQC---------NAGQQCDERTGQCFCP 1479
Query: 96 PHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSL--NRTCDPITGQCLCRPGVTGTRCE 153
PHV G CD+C + GC+ C C P GS N CDP +GQCLCR + G +C+
Sbjct: 1480 PHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRESMGGRQCD 1539
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C YGF C C C+ G+ CD + QC
Sbjct: 1540 RCLAGFYGFP--HCYGCSCNRAGTTEEICDATNAQC 1573
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+ G C C N G +CD C P ++ + CE C C G T F CD+++
Sbjct: 670 SNGQCY-CKGNFEGERCDRCKPNFYNFPI------CEECNCNPSGV--TRDFQG-CDKVS 719
Query: 90 -GQ-CSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLN--RTCDPITGQCLC 143
G+ CSC+ HV G CDQC+ +++ +GC+SCDC+ G+++ TCD TGQC+C
Sbjct: 720 PGELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMC 779
Query: 144 RPGVTGTRCELCQPNHY---GFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
+ G RC+ C Y ++ GC+ C CD G+ +CD SGQC
Sbjct: 780 KKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQC 828
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG CL C G +CD C ++G P +C+ C C G +P CD +
Sbjct: 579 TTGQCL-CKEGFAGDKCDRCDIAFYG----YP--NCKACACDGAGIT-----SPECDATS 626
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C + G CD+C G YN C+ C+C G+ +TCD GQC C+ G
Sbjct: 627 GQCPCNGNFTGRTCDKCAAGFYNY---PDCRGCECLLSGAKGQTCDS-NGQCYCKGNFEG 682
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIG 176
RC+ C+PN Y F + C+ C C+P G
Sbjct: 683 ERCDRCKPNFYNFPI--CEECNCNPSG 707
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 67/125 (53%), Gaps = 16/125 (12%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
C C G+ E+F C+Q GQC CKP V+G C++C G+YN C C C+
Sbjct: 1415 CDCVAQGS---ESFQ--CEQYGGQCKCKPGVIGRRCERCAPGYYNFPE---CIKCQCNA- 1465
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSN--SLQCDP 184
+ CD TGQC C P V G C+ C N +G+ L GC+ C C P GS +L CDP
Sbjct: 1466 ---GQQCDERTGQCFCPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDP 1522
Query: 185 -SGQC 188
SGQC
Sbjct: 1523 ESGQC 1527
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCD--- 86
TG C C +NT G C+ C G++G+A DC C C + P T F CD
Sbjct: 1843 TGICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMACACPFAP----TNNFAKSCDVSE 1898
Query: 87 --QLTGQCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSL--NRTCDPITGQ 140
QL QC+CKP G CD+C G + ISGE C C C+ +L +R+C P +G
Sbjct: 1899 EGQLL-QCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGD 1957
Query: 141 C-LCRPGVTGTRCELCQPNHYG--FSLDGCKPCMCDPIGS 177
C LC G CE C YG + C C C GS
Sbjct: 1958 CYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGS 1997
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C + G CD C+ FG P C+ C C+ G+ E VCD +G
Sbjct: 1473 TGQCF-CPPHVEGQTCDRCVSNAFG---YDPLIGCQKCGCHPQGS---EGGNLVCDPESG 1525
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+ + G CD+C G Y C C C+ G+ CD QC C+ V G
Sbjct: 1526 QCLCRESMGGRQCDRCLAGFYGFPH---CYGCSCNRAGTTEEICDATNAQCKCKENVYGG 1582
Query: 151 RCELCQPNHYGFSLD---GCKPCMC 172
RCE C+ + S + GC C C
Sbjct: 1583 RCEACKAGTFDLSAENPLGCVNCFC 1607
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 9 SVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC 68
++ + L + P+ + + ++ + +C GP C C GY G C PC
Sbjct: 1771 TLYEFGLEISEPNGVDSVIKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPC 1830
Query: 69 QCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-NIISGE--GCKSCDC 124
+C + CD TG C+ C+ + G +C+ C GHY N +G C +C C
Sbjct: 1831 EC--------NGHSATCDPDTGICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMACAC 1882
Query: 125 --DPVGSLNRTCDPITG----QCLCRPGVTGTRCELCQPNHYG---FSLDGCKPCMCDPI 175
P + ++CD QC C+PG TG RC+ C +G S + C PC C+
Sbjct: 1883 PFAPTNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCN-- 1940
Query: 176 GSNSL 180
G+N+L
Sbjct: 1941 GNNNL 1945
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 74/175 (42%), Gaps = 24/175 (13%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGT---------LETETFT 82
+C +NT G C+ C PG+ + A A CE C C+ L ++
Sbjct: 321 RCEHNTCGDMCERCCPGFVQKQWQAATAHNNFTCEACNCFGRSNECEYDAEVDLNKQSID 380
Query: 83 PVCDQLTGQC--SCKPHVVGTNCDQCEVGHYN---IISGE--GCKSCDCDPVGSLNRTCD 135
+ G +C+ + G NC++C G++ + E CK CDCDP C
Sbjct: 381 SQGNYEGGGVCKNCRENTEGVNCNKCSFGYFRPEGVTWNEPQPCKVCDCDP-DKHTGACA 439
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQCP 189
TG+C C P G C+ C +Y CKPC C+ G+ C P GQCP
Sbjct: 440 EETGKCECLPRFVGEDCDQCASGYY--DAPKCKPCECNVNGTIGDVCLPEDGQCP 492
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
SCDC GS + C+ GQC C+PGV G RCE C P +Y F C C C+
Sbjct: 1414 SCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFP--ECIKCQCNA----GQ 1467
Query: 181 QCDP-SGQC 188
QCD +GQC
Sbjct: 1468 QCDERTGQC 1476
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE---GCKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
QC C G +C C G++ + SG C C+C+ + TCDP TG C C
Sbjct: 1796 QCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECNGHSA---TCDPDTGICTDCEHN 1852
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC--DPIGSNSLQCDPSGQ 187
G CE C HYG + +G C C C P + + CD S +
Sbjct: 1853 TNGDHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNFAKSCDVSEE 1899
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C + G QC+ C G++ P G C PC C GT++ + C Q +GQC CK
Sbjct: 664 CKRHVSGRQCNQCQNGFYNLQELDPDG-CSPCNCNTSGTVDGDI---TCHQNSGQCKCKA 719
Query: 97 HVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
+V+G CD C G + S GC+ C C+ GS+N+ C+P +GQC C+ G +C+
Sbjct: 720 NVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDT 779
Query: 155 CQPNHYGFSLDGCKPCMCDPIGS 177
C+ N YG + CK C CD GS
Sbjct: 780 CRENFYGLDVTNCKACDCDTAGS 802
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 95/178 (53%), Gaps = 19/178 (10%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETF 81
+ G G C C +NT G C+ C +F A P C+PC C T+ T
Sbjct: 595 FEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDC---DTVGTRNG 651
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSL--NRTCDPI 137
+ +CDQ+ GQC+CK HV G C+QC+ G YN+ + +GC C+C+ G++ + TC
Sbjct: 652 SILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQN 711
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSL------DGCKPCMCDPIGSNSLQCDP-SGQC 188
+GQC C+ V G RC+ C ++GF GC+PC C+ GS + C+P SGQC
Sbjct: 712 SGQCKCKANVIGLRCDHC---NFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQC 766
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 18/167 (10%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C G QCDTC ++G L +C+ C C G+L VC+ TG
Sbjct: 763 SGQC-ECKKEAKGLQCDTCRENFYG----LDVTNCKACDCDTAGSLPGT----VCNAKTG 813
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKP+V G C++C G++ + C C+CD G++N + C+ TGQC C+ G
Sbjct: 814 QCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCKLG 873
Query: 147 VTGTRCELCQPNHYGFSLDG---CKPCMCDPIGS-NSLQCDP-SGQC 188
VTG RC C+P+ Y ++D C+ C CD +G+ CDP SGQC
Sbjct: 874 VTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQC 920
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 25/177 (14%)
Query: 22 DILKSVAGT-----TGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIP 73
D L ++ GT +G CL C+ N G +C+ C PG++ G+A C PC C+
Sbjct: 903 DSLGTLPGTICDPISGQCL-CVPNRQGRRCNQCQPGFYISPGNATG-----CLPCSCHTT 956
Query: 74 GTLETETFTPVCDQLTGQCSCK-PHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLN 131
G + +C+ LTGQC C+ + G CDQC+ ++ G C+ C+C G+LN
Sbjct: 957 GAVNH-----ICNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALN 1011
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TC +TGQC C+ VTG++C+ C P+ ++ C P Q P GQ
Sbjct: 1012 ETCHLVTGQCFCKQFVTGSKCDACVPSASHLDVNNLLGCSKTPFQ----QPPPRGQV 1064
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 70/164 (42%), Gaps = 33/164 (20%)
Query: 41 TGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGT----------LETETFT---P 83
T G CD CLP Y F + +C+PCQC E F
Sbjct: 544 TEGLHCDRCLPLYNDKPFRQGDQVYAFNCKPCQCNSHSKSCHYNISVDPFPFEHFRGGGG 603
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRT--CDP 136
VCD C+ + G NC+ C+ + + + CK CDCD VG+ N + CD
Sbjct: 604 VCD------DCEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDCDTVGTRNGSILCDQ 657
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGS 177
I GQC C+ V+G +C CQ Y DGC PC C+ G+
Sbjct: 658 IGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGT 701
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 92/190 (48%), Gaps = 38/190 (20%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C +NT G C+ C GY+ G + P G C PC C C+Q
Sbjct: 388 GVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDG-CIPCSC-------DPEHADGCEQG 439
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNI-------------------ISGEGCKSCDCDPVGS 129
+G+C CKP+ G NC++C +G+YN ++G+ K CDC+ G
Sbjct: 440 SGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGD-IKGCDCNLEGV 498
Query: 130 LNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
L CD G+CLCRPGV G RC+ C+ Y F + C+ C C +GS + C +GQC
Sbjct: 499 LPEICDA-HGRCLCRPGVEGPRCDTCRSGFYSFPI--CQACWCSALGSYQMPCSSVTGQC 555
Query: 189 ---PGVFMNR 195
PGV R
Sbjct: 556 ECRPGVTGQR 565
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C T PQC+ C F P CE C C GT+E P CD+ +G
Sbjct: 1323 TGQC-RCPPRTVRPQCEVCETHSFS---FHPMAGCEGCNCSRRGTIEAAM--PECDRDSG 1376
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP + G CD+C G Y C C+C+ G+ CDP TG CLC+ V GT
Sbjct: 1377 QCRCKPRITGRQCDRCASGFYRFPE---CVPCNCNRDGTEPGVCDPGTGACLCKENVEGT 1433
Query: 151 RCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMN 194
C +C+ + +L GC C C G N+ QC S + F++
Sbjct: 1434 ECNVCREGSFHLDPANLKGCTSCFC--FGVNN-QCHSSHKRRTKFVD 1477
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 40 NTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVV 99
N G QC C G++G P+ C+PC C +C+++TGQC C P V
Sbjct: 1290 NVIGRQCTRCATGHYG----FPR--CKPCSC----------GRRLCEEMTGQCRCPPRTV 1333
Query: 100 GTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT---CDPITGQCLCRPGVTGTRCELCQ 156
C+ CE ++ GC+ C+C G++ CD +GQC C+P +TG +C+ C
Sbjct: 1334 RPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCA 1393
Query: 157 PNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
Y F C PC C+ G+ CDP
Sbjct: 1394 SGFYRFP--ECVPCNCNRDGTEPGVCDP 1419
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Query: 37 CIYNTGGPQCDTCLPGYFGDA--LALP-------------KGDCEPCQCYIPGTLETETF 81
C N G C+ C GY+ L +P GD + C C + G L
Sbjct: 445 CKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGVL----- 499
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
+CD G+C C+P V G CD C G Y+ C++C C +GS C +TGQC
Sbjct: 500 PEICDA-HGRCLCRPGVEGPRCDTCRSGFYSFPI---CQACWCSALGSYQMPCSSVTGQC 555
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
CRPGVTG RC+ C Y F CDP G+
Sbjct: 556 ECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDPAGT 591
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 28 AGTTGDCL---KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
AGT L +C + GP C C Y+ P G C C+C+ GT+ + T
Sbjct: 589 AGTINSNLGYCQCKLHVEGPTCSRCKLLYWNLDKENPSG-CSECKCHKAGTV---SGTGE 644
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCL 142
C Q G C CK HV G +CD CE G++ + GC+ C CD G+L+ C +G C
Sbjct: 645 CRQGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVCQ 704
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCMCD---PIGSN-SLQCDPSGQCPGVFMNRAEM 198
CR V G C+ + N+Y L K + D P G + DP + A+M
Sbjct: 705 CREHVVGKVCQRPENNYYFPDLHHMKYEIEDGSTPNGRDLRFGFDPLAFPEFSWRGYAQM 764
Query: 199 SS--DDVR 204
+S +DVR
Sbjct: 765 TSVQNDVR 772
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 23 ILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT 82
+L + G CL C GP+CDTC G++ + C+ C C G+ +
Sbjct: 498 VLPEICDAHGRCL-CRPGVEGPRCDTCRSGFYSFPI------CQACWCSALGSYQMP--- 547
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
C +TGQC C+P V G CD+C G Y+ +G S CDP G++N G C
Sbjct: 548 --CSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA-CDPAGTINSNL----GYCQ 600
Query: 143 CRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNS 179
C+ V G C C+ ++ + GC C C G+ S
Sbjct: 601 CKLHVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVS 640
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 18/127 (14%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC+C+ G P C GQC C+P+V+G C +C GHY CK C C
Sbjct: 1265 PCECHPTGAT-----GPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFPR---CKPCSCG- 1315
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSNSL---QC 182
R C+ +TGQC C P +CE+C+ + + F + GC+ C C G+ +C
Sbjct: 1316 ----RRLCEEMTGQCRCPPRTVRPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPEC 1371
Query: 183 DP-SGQC 188
D SGQC
Sbjct: 1372 DRDSGQC 1378
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 42 GGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVG 100
G C C PGY+ D L G C PC C + C +G C +C+ + G
Sbjct: 1661 AGDSCQGCSPGYYRDHKGLYTGRCVPCNC--------NGHSNQCQDGSGICVNCQHNTAG 1712
Query: 101 TNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPN 158
+C++C+ G+Y C++C C S C G +C C+ G TGT+CE C P
Sbjct: 1713 EHCERCQEGYYGNAVHGSCRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPG 1772
Query: 159 HYGFSLD---GCKPCMCDPIG 176
++G C+PC C+ G
Sbjct: 1773 YFGNPQKFGGSCQPCSCNSNG 1793
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C GY+G+A+ G C C C T +F C G
Sbjct: 1700 SGICVNCQHNTAGEHCERCQEGYYGNAV---HGSCRACPC-----PHTNSFATGCVVNGG 1751
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
+CSCK GT C++C G++ G C+ C C+ G L +C P+TG C+
Sbjct: 1752 DVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQLG-SCHPLTGDCI 1806
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMC 172
+G C+C P G+ C P GQC C+P V G +C C HYGF CKPC C
Sbjct: 1261 KGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFPR--CKPCSC 1314
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQC--------YIPGTLETETFTP 83
+C ++T G CD C GY + A +CE C C Y P +
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLN 379
Query: 84 VCDQLTGQ---CSCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCD 135
G +C+ + G NC+QC G+Y + + +GC C CDP + C+
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIPCSCDPEHA--DGCE 437
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGF 162
+G+C C+P G CE C +Y F
Sbjct: 438 QGSGRCHCKPNFHGDNCEKCAIGYYNF 464
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN----IISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
C+C P G +C C G+Y + +G C C+C+ G N+ C +G C+ C+
Sbjct: 1654 CACPPAYAGDSCQGCSPGYYRDHKGLYTGR-CVPCNCN--GHSNQ-CQDGSGICVNCQHN 1709
Query: 147 VTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
G CE CQ +YG ++ G C+ C C S + C +G
Sbjct: 1710 TAGEHCERCQEGYYGNAVHGSCRACPCPHTNSFATGCVVNG 1750
>sp|Q61092|LAMC2_MOUSE Laminin subunit gamma-2 OS=Mus musculus GN=Lamc2 PE=1 SV=2
Length = 1191
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 83/160 (51%), Gaps = 24/160 (15%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L G+ CL C NT G C+ C G++ + C PC C+ G+L +
Sbjct: 43 LHRQTGSGFRCLNCNDNTAGVHCERCREGFYRHR---DRDRCLPCNCHSKGSL-----SA 94
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC--------KSCDCDPVGSLNRTCD 135
CD +GQC CKP V G CD+C+ G +++++ GC CDCDP G ++ CD
Sbjct: 95 GCDN-SGQCRCKPGVTGQRCDRCQPG-FHMLTDAGCTRDQGQLDSKCDCDPAG-ISGPCD 151
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
+G+C+C+P VTG RC+ C+P +Y +GC C C
Sbjct: 152 --SGRCVCKPAVTGERCDRCRPGYYHLDRANPEGCTQCFC 189
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
+C + G +C++C G Y + C C+C GSL+ CD +GQC C+PGVTG RC
Sbjct: 55 NCNDNTAGVHCERCREGFYRHRDRDRCLPCNCHSKGSLSAGCDN-SGQCRCKPGVTGQRC 113
Query: 153 ELCQPNHYGFSLDGC--------KPCMCDPIG 176
+ CQP + + GC C CDP G
Sbjct: 114 DRCQPGFHMLTDAGCTRDQGQLDSKCDCDPAG 145
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CLKCIYNT G CD C GYFGD LA P C C C G+ E +
Sbjct: 535 TGRCLKCIYNTAGVYCDQCKAGYFGDPLAPNPADKCRACNCSPMGSEPGEC------RGD 588
Query: 90 GQCSCKPHVVGTNCDQCEV 108
G C CKP G NCD +
Sbjct: 589 GSCVCKPGFGGLNCDHAAL 607
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQ-CYIPGTLETETFTPVCDQLTGQC-SCKPHVVG 100
G +C+ C G+FGD +G PCQ C ++ + CDQLTG+C C + G
Sbjct: 490 GARCELCADGFFGDPFG-ERGPVRPCQRCQCNNNVDPNA-SGNCDQLTGRCLKCIYNTAG 547
Query: 101 TNCDQCEVGHYNI----ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
CDQC+ G++ + C++C+C P+GS C G C+C+PG G C+
Sbjct: 548 VYCDQCKAGYFGDPLAPNPADKCRACNCSPMGSEPGECRG-DGSCVCKPGFGGLNCD 603
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 28/175 (16%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQL 88
TGDC N +C C G++ D P+ C+PC C+ ++ ET VC+
Sbjct: 428 TGDCYSGDENPD-IECADCPIGFYNDPHD-PRS-CKPCPCHNGFSCSVMPETEEVVCN-- 482
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DPVGSLNRTCDPITG 139
+C P V G C+ C G + GE C+ C C DP S N CD +TG
Sbjct: 483 ----NCPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPNASGN--CDQLTG 536
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
+CL C G C+ C+ ++G L D C+ C C P+GS +C G C
Sbjct: 537 RCLKCIYNTAGVYCDQCKAGYFGDPLAPNPADKCRACNCSPMGSEPGECRGDGSC 591
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 63/157 (40%), Gaps = 26/157 (16%)
Query: 43 GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C C GY D+ L P G C PC C G CD TG C
Sbjct: 390 GQFCQECASGYKRDSARLGPFGACVPCNCQGGG---------ACDPDTGDCYSGDENPDI 440
Query: 102 NCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR---PGVTGTRCELCQP 157
C C +G YN CK C C + + P T + +C PGVTG RCELC
Sbjct: 441 ECADCPIGFYNDPHDPRSCKPCPCH--NGFSCSVMPETEEVVCNNCPPGVTGARCELCAD 498
Query: 158 NHYG--FSLDG----CKPCMCDPIGSNSLQCDPSGQC 188
+G F G C+ C C+ N++ + SG C
Sbjct: 499 GFFGDPFGERGPVRPCQRCQCN----NNVDPNASGNC 531
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFG------DALALPKGDCEPCQCYIPGTLET 78
K V G C+ C +NT G C+ C GYF DAL C PC C P +
Sbjct: 378 KGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGVPVDALH----GCIPCSC-DPERADD 432
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI-------------------ISGEGC 119
CDQ +G C CKP+ G C+ C G+YN ++G
Sbjct: 433 ------CDQGSGHCHCKPNFSGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAG-NI 485
Query: 120 KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
K CDC+ G L CD G+CLCRPGV G +C+ C+ Y F + C+ C C IGS
Sbjct: 486 KGCDCNLEGVLPEICDD-RGRCLCRPGVEGPQCDSCRSGSYSFPI--CQACQCSTIGSYP 542
Query: 180 LQCDP-SGQC---PGV 191
+ CDP +GQC PG+
Sbjct: 543 VPCDPGNGQCDCLPGI 558
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 28 AGTTGDCL---KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
AGT L +C + P C C P Y+ A P+G C CQC+ GTL +
Sbjct: 586 AGTLDSSLGYCQCKQHVASPTCSVCKPLYWNLAKENPRG-CSECQCHEAGTL---SGIGE 641
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCL 142
C Q G CSCK HV G CD CE G +++ GC+ C CD G+L C +G C
Sbjct: 642 CGQEDGDCSCKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQ 701
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSN 178
CR V G +C+ + N+Y L K + D G N
Sbjct: 702 CREHVEGKQCQRPENNYYFPDLHHMKYEVEDGTGPN 737
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C +T PQC+ C F P C+ C C GT+E CD+ +
Sbjct: 1320 VTGKCL-CPPHTVRPQCEVCEMNSFN---FHPVAGCDVCNCSRKGTIEAAV--SECDRDS 1373
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC CKP V G CD+C G + C C C+ G+ CDP TG C+C+ V G
Sbjct: 1374 GQCRCKPRVTGQQCDKCAPGLLPVPLK--CVPCSCNRDGTEPSVCDPETGACMCKENVEG 1431
Query: 150 TRCELCQPNHYGFSLD-----GCKPCMC 172
+C+LC+ F LD GC C C
Sbjct: 1432 PQCQLCREG--SFYLDPTNPKGCTKCFC 1457
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGT 101
G C C PGY+ D +LP G C PC C + C +G C +C+ + G
Sbjct: 1662 GDSCQGCRPGYYWDNKSLPVGRCVPCNC--------NGHSNRCQDGSGICINCQHNTAGE 1713
Query: 102 NCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTC--DPITGQCLCRPGVTGTRCELCQPN 158
+C++C+ GHY N I G C+ C C S C D +C C+PG TGT+CE C P
Sbjct: 1714 HCERCQAGHYGNAIHG-SCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPG 1772
Query: 159 HYGFSLD---GCKPCMCDPIG 176
++G C+PC C+ G
Sbjct: 1773 YFGNPQKFGGSCQPCNCNSNG 1793
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 41 TGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
+ G GY+G P C+PC C +C+++TG+C C PH V
Sbjct: 1289 SSGASAAAVRQGYYG----FPY--CKPCNC----------GRRLCEEVTGKCLCPPHTVR 1332
Query: 101 TNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT---CDPITGQCLCRPGVTGTRCELCQP 157
C+ CE+ +N GC C+C G++ CD +GQC C+P VTG +C+ C P
Sbjct: 1333 PQCEVCEMNSFNFHPVAGCDVCNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAP 1392
Query: 158 NHYGFSLDGCKPCMCDPIGSNSLQCDP 184
L C PC C+ G+ CDP
Sbjct: 1393 GLLPVPLK-CVPCSCNRDGTEPSVCDP 1418
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Query: 37 CIYNTGGPQCDTCLPGYFGDA--LALP-------------KGDCEPCQCYIPGTLETETF 81
C N G C+TC GY+ L +P G+ + C C + G L
Sbjct: 442 CKPNFSGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGNIKGCDCNLEGVLPE--- 498
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
+CD G+C C+P V G CD C G Y+ C++C C +GS CDP GQC
Sbjct: 499 --ICDD-RGRCLCRPGVEGPQCDSCRSGSYSFPI---CQACQCSTIGSYPVPCDPGNGQC 552
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
C PG+TG +C+ C Y F +C P G+
Sbjct: 553 DCLPGITGRQCDRCLSGAYDFPYCQGSGSVCHPAGT 588
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
+G C+ C +NT G C+ C G++G+A+ G C C C T +F C D
Sbjct: 1700 SGICINCQHNTAGEHCERCQAGHYGNAI---HGSCRVCPC-----PHTNSFATGCAVDGG 1751
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+C+CKP GT C++C G++ G C+ C+C+ G L CDP+TG C+ +
Sbjct: 1752 AVRCACKPGYTGTQCERCAPGYFGNPQKFGGSCQPCNCNSNGQLG-PCDPLTGDCVNQEP 1810
Query: 147 VTGTRCELC 155
G+ E C
Sbjct: 1811 KDGSPAEEC 1819
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 65/160 (40%), Gaps = 21/160 (13%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C+ G QCD CL G A P C+ GTL D G C CK
Sbjct: 554 CLPGITGRQCDRCLSG----AYDFPYCQGSGSVCHPAGTL---------DSSLGYCQCKQ 600
Query: 97 HVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT--CDPITGQCLCRPGVTGTRC 152
HV C C+ ++N+ GC C C G+L+ C G C C+ VTG C
Sbjct: 601 HVASPTCSVCKPLYWNLAKENPRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHVTGDAC 660
Query: 153 ELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCD-PSGQC 188
+ C+ + GC+ C CD G+ + C PSG C
Sbjct: 661 DTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVC 700
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHY---NIISGEGCKSCDCDPVGSLNRTCDPITGQCL- 142
L C+C P G +C C G+Y + C C+C+ G NR C +G C+
Sbjct: 1649 HLVEMCACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCN--GHSNR-CQDGSGICIN 1705
Query: 143 CRPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
C+ G CE CQ HYG ++ G C+ C C S + C G
Sbjct: 1706 CQHNTAGEHCERCQAGHYGNAIHGSCRVCPCPHTNSFATGCAVDG 1750
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 118 GCKSCDCDPVGSL-NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMC 172
G C+CDP G+ + C P G L P +G + +YGF CKPC C
Sbjct: 1259 GAIPCECDPAGTAGHHHCSPEGGSALAGPMSSGASAAAVRQGYYGFPY--CKPCNC 1312
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT-------- 82
TG C C ++T GP+C+ C PGY+GDA DC+ C CY T
Sbjct: 1172 TGACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQAAHTCFLDTDGH 1231
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEGCKS---------CDCDPVGSLNR 132
P CD +C P G +C++C G+Y N G+ C+ C+CDP GS++
Sbjct: 1232 PTCD------ACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSS 1285
Query: 133 TCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
CD GQC C+ V G C C+P+H+ S DGC PC C
Sbjct: 1286 QCD-AAGQCQCKAQVEGLTCSHCRPHHFHLSASNPDGCLPCFC 1327
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT-G 90
G CL C +NT GPQC+ C G+FGDA+ C PC C P + F+ C T G
Sbjct: 778 GHCLNCQHNTEGPQCNKCKAGFFGDAMKATATSCRPCPC--PYIDASRRFSDTCFLDTDG 835
Query: 91 QC---SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCD-----CDPVGSLNRTCDPITGQ 140
Q +C P G C+ C G+ I G C+ + CD GS+ + +
Sbjct: 836 QATCDACAPGYTGRRCESCAPGYEGNPIQPGGKCRPVNQEIVRCDERGSMGTSGE----A 891
Query: 141 CLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
C C+ V G C C + S DGC C C
Sbjct: 892 CRCKNNVVGRLCNECADGSFHLSTRNPDGCLKCFC 926
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 72/177 (40%), Gaps = 48/177 (27%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGT 101
GP C C GY L G CE C C+ + C+ TG C C+ H G
Sbjct: 1134 GPSCQDCDTGYTRTPSGLYLGTCERCSCH--------GHSEACEPETGACQGCQHHTEGP 1185
Query: 102 NCDQCEVGHY------------------NIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C+QC+ G+Y + +G+ +C D G + TCD C
Sbjct: 1186 RCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQAAHTCFLDTDG--HPTCD------AC 1237
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCM------------CDPIGSNSLQCDPSGQC 188
PG +G CE C P +YG G +PC CDP GS S QCD +GQC
Sbjct: 1238 SPGHSGRHCERCAPGYYGNPSQG-QPCQRDSQVPGPIGCNCDPQGSVSSQCDAAGQC 1293
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 85/219 (38%), Gaps = 38/219 (17%)
Query: 8 VSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP 67
S+ + L V P + A +C +C G C C PGY L G CE
Sbjct: 1504 ASISAVSLEVAQPGPSNRPRALEVEEC-RCPPGYIGLSCQDCAPGYTRTGSGLYLGHCEL 1562
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIISG---EGCKSCD 123
C+C + +C TG CS C+ + G C+ C G+Y + E C+ C
Sbjct: 1563 CEC--------NGHSDLCHPETGACSQCQHNAAGEFCELCAPGYYGDATAGTPEDCQPCA 1614
Query: 124 C---DPVGSLNRTCDPITGQ----CLCRPGVTGTRCELCQPNHYGF-SLDG--CKP---- 169
C +P +RTC+ + C PG TG CE C P + G S+ G C P
Sbjct: 1615 CPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCGPGYVGNPSVQGGQCLPETNQ 1674
Query: 170 -----------CMCDPIGSNSLQCDPSGQCPGVFMNRAE 197
+ GS+SL+C SG P F E
Sbjct: 1675 APLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSRE 1713
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISG---EGCKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
QCSC P G +C C+ G+ SG C+ C C + C+P TG C C+
Sbjct: 1125 QCSCPPGYRGPSCQDCDTGYTRTPSGLYLGTCERCSCH---GHSEACEPETGACQGCQHH 1181
Query: 147 VTGTRCELCQPNHYGFSLDGCK------PCMCDPIGSNS 179
G RCE CQP +YG + G PC DP +
Sbjct: 1182 TEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQA 1220
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE----GCKSCDCDPVGSLNRTCDPITGQCL-CRP 145
+C C G +C+ C+ H+ + G C C+C+ S +CDP+ G CL C+
Sbjct: 730 ECRCPIGYSGLSCESCDA-HFTRVPGGPYLGTCSGCNCNGHAS---SCDPVYGHCLNCQH 785
Query: 146 GVTGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCD 183
G +C C+ +G ++ C+PC C I ++ D
Sbjct: 786 NTEGPQCNKCKAGFFGDAMKATATSCRPCPCPYIDASRRFSD 827
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT-------- 82
TG C C ++T G C+ C PGY+GDA DC+PC CY T
Sbjct: 1172 TGACQSCQHHTEGASCEQCQPGYYGDAQRGTPQDCQPCPCYGAPAAGQAAHTCFLDTDGH 1231
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEGCKS---------CDCDPVGSLNR 132
P CD SC P G +C++C G+Y N G+ C C CDP GS++
Sbjct: 1232 PTCD------SCSPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHGSISS 1285
Query: 133 TCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
CD GQC C+ V G C C+P+H+ S +GC PC C
Sbjct: 1286 QCD-AAGQCQCKAQVEGRSCSHCRPHHFHLSASNPEGCLPCFC 1327
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT-G 90
G CL C +NT GPQCD C PG+FGDA C PC C P + F+ C T G
Sbjct: 778 GHCLNCQHNTEGPQCDKCKPGFFGDATKATATACRPCPC--PYIDASRRFSDTCFLDTDG 835
Query: 91 QC---SCKPHVVGTNCDQCEVGHYN--IISGEGCKS-----CDCDPVGSLNRTCDPITGQ 140
Q +C P G C+ C G+ I G C+ CD GSL + +
Sbjct: 836 QATCDACAPGYTGRRCESCAPGYEGNPIQPGGKCRPTTQEIVRCDERGSLGTSGE----T 891
Query: 141 CLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
C C+ V G C C + S DGC C C
Sbjct: 892 CRCKNNVVGRLCNECSDGSFHLSKQNPDGCLKCFC 926
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 46/176 (26%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGT 101
GP C C GY L G CE C C+ G ET C+ TG C SC+ H G
Sbjct: 1134 GPSCQDCDTGYTRVPSGLYLGTCERCNCH--GHSET------CEPETGACQSCQHHTEGA 1185
Query: 102 NCDQCEVGHYN------------------IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+C+QC+ G+Y +G+ +C D G + TCD C
Sbjct: 1186 SCEQCQPGYYGDAQRGTPQDCQPCPCYGAPAAGQAAHTCFLDTDG--HPTCDS------C 1237
Query: 144 RPGVTGTRCELCQPNHYGF-------SLDGCKP----CMCDPIGSNSLQCDPSGQC 188
PG +G CE C P +YG DG P C CDP GS S QCD +GQC
Sbjct: 1238 SPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHGSISSQCDAAGQC 1293
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C +NT G C+ C GY+GDA A DC+PC C P T F+ C+ L
Sbjct: 1576 TGACSRCQHNTAGEFCELCATGYYGDATAGTPEDCQPCAC--PLTNPENMFSRTCESLGA 1633
Query: 91 Q----CSCKPHVVGTNCDQCEVGH 110
+C+P G C+QC G+
Sbjct: 1634 GGYRCTACEPGYTGQYCEQCAPGY 1657
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGT 101
G C C PGY L G CE C+C + +C TG CS C+ + G
Sbjct: 1538 GLSCQDCAPGYTRTGSGLYLGQCELCEC--------NGHSDLCHPETGACSRCQHNTAGE 1589
Query: 102 NCDQCEVGHYNIISG---EGCKSCDC---DPVGSLNRTCDPITGQ----CLCRPGVTGTR 151
C+ C G+Y + E C+ C C +P +RTC+ + C PG TG
Sbjct: 1590 FCELCATGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACEPGYTGQY 1649
Query: 152 CELCQPNHYG---FSLDGCKPCMCDPI--------------GSNSLQCDPSGQCPGVFMN 194
CE C P + G C+P + + G +SL+C SG P F
Sbjct: 1650 CEQCAPGYEGDPNVQGGRCQPLTKESLEVQIHPSRSVVPQGGPHSLRCQVSGSPPHYFYW 1709
Query: 195 RAE 197
E
Sbjct: 1710 SRE 1712
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISG---EGCKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
QC+C P G +C C+ G+ + SG C+ C+C + TC+P TG C C+
Sbjct: 1125 QCTCPPGYRGPSCQDCDTGYTRVPSGLYLGTCERCNCH---GHSETCEPETGACQSCQHH 1181
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC 172
G CE CQP +YG + G C+PC C
Sbjct: 1182 TEGASCEQCQPGYYGDAQRGTPQDCQPCPC 1211
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISG---EGCKSCDCDPVGSLNRTCDPITGQC-LCRPG 146
+C C P VG +C C G+ SG C+ C+C+ L C P TG C C+
Sbjct: 1529 ECRCPPGYVGLSCQDCAPGYTRTGSGLYLGQCELCECNGHSDL---CHPETGACSRCQHN 1585
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC 172
G CELC +YG + G C+PC C
Sbjct: 1586 TAGEFCELCATGYYGDATAGTPEDCQPCAC 1615
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE----GCKSCDCDPVGSLNRTCDPITGQCL-CRP 145
+C C G +C+ C+ H+ + G C C+C+ S +CDP+ G CL C+
Sbjct: 730 ECRCPIGYSGLSCESCDA-HFTRVPGGPYLGTCSGCNCNGHAS---SCDPVYGHCLNCQH 785
Query: 146 GVTGTRCELCQPNHYG----FSLDGCKPCMCDPIGSNSLQCD 183
G +C+ C+P +G + C+PC C I ++ D
Sbjct: 786 NTEGPQCDKCKPGFFGDATKATATACRPCPCPYIDASRRFSD 827
>sp|Q8HZI9|LAMC2_HORSE Laminin subunit gamma-2 OS=Equus caballus GN=LAMC2 PE=2 SV=1
Length = 1190
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 81/160 (50%), Gaps = 24/160 (15%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L G CL C NT G C+ C G++ + C PC C G+L +
Sbjct: 43 LHKQTGNGFRCLNCNDNTDGIHCERCKAGFYRQR---ERDRCLPCNCNSKGSL-----SA 94
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC--------KSCDCDPVGSLNRTCD 135
CD +G+CSCKP V G CD+C G ++ ++ GC CDCDP G ++ CD
Sbjct: 95 RCDN-SGRCSCKPGVTGDRCDRCLPG-FHTLTDAGCAQDQRLLDSKCDCDPAG-ISGPCD 151
Query: 136 PITGQCLCRPGVTGTRCELCQPNHY---GFSLDGCKPCMC 172
+G+C+C+P VTG RC+ C+P +Y G + GC C C
Sbjct: 152 --SGRCVCKPAVTGERCDRCRPGYYHLDGGNPQGCTQCFC 189
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALAL--PKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C C G +C+ C GYFGD P C+PCQC + + CD+LTG+
Sbjct: 482 CNNCPQGVTGARCELCADGYFGDPFGERGPVRPCQPCQC---NNNVDPSASGNCDRLTGR 538
Query: 92 C-SCKPHVVGTNCDQCEVGHYNI----ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
C C + G +CDQC+ G+Y + C++C+C+PVGS C G C+C+PG
Sbjct: 539 CLKCIHNTAGVHCDQCKAGYYGDPLAPNPADKCRACNCNPVGSEPVECRS-DGSCVCKPG 597
Query: 147 VTGTRCE 153
G CE
Sbjct: 598 FGGLSCE 604
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQL 88
TGDC N P+C C G++ D P+ C+PC C ++ ET VC+
Sbjct: 428 TGDCYSGDENPDIPECADCPIGFYNDPQD-PRS-CKPCPCRNGFSCSVMPETEEVVCN-- 483
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DPVGSLNRTCDPITG 139
+C V G C+ C G++ GE C+ C C DP S N CD +TG
Sbjct: 484 ----NCPQGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNNNVDPSASGN--CDRLTG 537
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
+CL C G C+ C+ +YG L D C+ C C+P+GS ++C G C
Sbjct: 538 RCLKCIHNTAGVHCDQCKAGYYGDPLAPNPADKCRACNCNPVGSEPVECRSDGSC 592
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
+C + G +C++C+ G Y + C C+C+ GSL+ CD +G+C C+PGVTG RC
Sbjct: 55 NCNDNTDGIHCERCKAGFYRQRERDRCLPCNCNSKGSLSARCDN-SGRCSCKPGVTGDRC 113
Query: 153 ELCQPNHYGFSLDGC--------KPCMCDPIG 176
+ C P + + GC C CDP G
Sbjct: 114 DRCLPGFHTLTDAGCAQDQRLLDSKCDCDPAG 145
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CLKCI+NT G CD C GY+GD LA P C C C G+ PV +
Sbjct: 536 TGRCLKCIHNTAGVHCDQCKAGYYGDPLAPNPADKCRACNCNPVGS------EPVECRSD 589
Query: 90 GQCSCKPHVVGTNCDQCEV 108
G C CKP G +C+ +
Sbjct: 590 GSCVCKPGFGGLSCEHAAL 608
>sp|Q9H1U4|MEGF9_HUMAN Multiple epidermal growth factor-like domains protein 9 OS=Homo
sapiens GN=MEGF9 PE=2 SV=3
Length = 602
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
C C + G+L C+Q TGQC C+P G +C+ C+ G Y + C+ CDC P
Sbjct: 204 CNCSVVGSLNVNR----CNQTTGQCECRPGYQGLHCETCKEGFYLNYTSGLCQPCDCSPH 259
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
G+L+ C+ +G+C C+ GV G+ C+ CQ +YGFS +GC PC C+ + S CD
Sbjct: 260 GALSIPCN-SSGKCQCKVGVIGSICDRCQDGYYGFSKNGCLPCQCN---NRSASCD 311
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C +C G C+TC G++ L G C+PC C G L C+ +
Sbjct: 220 TTGQC-ECRPGYQGLHCETCKEGFY---LNYTSGLCQPCDCSPHGALSIP-----CNS-S 269
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVT 148
G+C CK V+G+ CD+C+ G+Y S GC C C+ + + +CD +TG CL C+
Sbjct: 270 GKCQCKVGVIGSICDRCQDGYYG-FSKNGCLPCQCN---NRSASCDALTGACLNCQENSK 325
Query: 149 GTRCELCQPNHYGFSLDGCKPCM 171
G CE C+ Y S D K C+
Sbjct: 326 GNHCEECKEGFYQ-SPDATKECL 347
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-----LETETFTPVC 85
TG CL C N+ G C+ C G++ A +C C C + +++ P C
Sbjct: 314 TGACLNCQENSKGNHCEECKEGFYQSPDAT--KECLRCPCSAVTSTGSCSIKSSELEPEC 371
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC----DPVGSLNRTCDPITGQC 141
DQ CK +G NC++CE G+YN S C+ C C DPV + + C P +G+C
Sbjct: 372 DQ------CKDGYIGPNCNKCENGYYNFDS--ICRKCQCHGHVDPVKTP-KICKPESGEC 422
Query: 142 L-CRPGVTGTRCELC 155
+ C TG CE C
Sbjct: 423 INCLHNTTGFWCENC 437
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 77/179 (43%), Gaps = 24/179 (13%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P L ++G C +C G CD C GY+G K C PCQC
Sbjct: 258 PHGALSIPCNSSGKC-QCKVGVIGSICDRCQDGYYG----FSKNGCLPCQC--------N 304
Query: 80 TFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNII-SGEGCKSCDCDPV---GSLNRTC 134
+ CD LTG C +C+ + G +C++C+ G Y + + C C C V GS +
Sbjct: 305 NRSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDATKECLRCPCSAVTSTGSCSIKS 364
Query: 135 DPITGQC-LCRPGVTGTRCELCQPNHYGFSLDGCKPCMC----DPIGSNSLQCDPSGQC 188
+ +C C+ G G C C+ +Y F C+ C C DP+ + + SG+C
Sbjct: 365 SELEPECDQCKDGYIGPNCNKCENGYYNFD-SICRKCQCHGHVDPVKTPKICKPESGEC 422
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGD 56
+G+C+ C++NT G C+ CL GY D
Sbjct: 419 SGECINCLHNTTGFWCENCLEGYVHD 444
>sp|Q13753|LAMC2_HUMAN Laminin subunit gamma-2 OS=Homo sapiens GN=LAMC2 PE=1 SV=2
Length = 1193
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 24/160 (15%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L G CL C NT G C+ C G++ + C PC C G+L +
Sbjct: 43 LHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHR---ERDRCLPCNCNSKGSL-----SA 94
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC--------KSCDCDPVGSLNRTCD 135
CD +G+CSCKP V G CD+C G +++++ GC CDCDP G + CD
Sbjct: 95 RCDN-SGRCSCKPGVTGARCDRCLPG-FHMLTDAGCTQDQRLLDSKCDCDPAG-IAGPCD 151
Query: 136 PITGQCLCRPGVTGTRCELCQPNHY---GFSLDGCKPCMC 172
G+C+C+P VTG RC+ C+ +Y G + +GC C C
Sbjct: 152 --AGRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 43 GPQCDTCLPGYFGDALAL--PKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVV 99
G +C+ C GYFGD P C+PCQC + + CD+LTG+C C +
Sbjct: 490 GARCELCADGYFGDPFGEHGPVRPCQPCQC---NNNVDPSASGNCDRLTGRCLKCIHNTA 546
Query: 100 GTNCDQCEVGHYNI----ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELC 155
G CDQC+ G++ + C++C+C+P+GS C G C+C+PG G CE
Sbjct: 547 GIYCDQCKAGYFGDPLAPNPADKCRACNCNPMGSEPVGCRS-DGTCVCKPGFGGPNCE-- 603
Query: 156 QPNHYGFS 163
H FS
Sbjct: 604 ---HGAFS 608
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
+C + G +C++C+ G Y + C C+C+ GSL+ CD +G+C C+PGVTG RC
Sbjct: 55 NCNDNTDGIHCEKCKNGFYRHRERDRCLPCNCNSKGSLSARCDN-SGRCSCKPGVTGARC 113
Query: 153 ELCQPNHYGFSLDGC--------KPCMCDPIG 176
+ C P + + GC C CDP G
Sbjct: 114 DRCLPGFHMLTDAGCTQDQRLLDSKCDCDPAG 145
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CLKCI+NT G CD C GYFGD LA P C C C G+ PV +
Sbjct: 535 TGRCLKCIHNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPMGS------EPVGCRSD 588
Query: 90 GQCSCKPHVVGTNCDQ 105
G C CKP G NC+
Sbjct: 589 GTCVCKPGFGGPNCEH 604
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQL 88
TGDC N +C C G++ D P+ C+PC C+ ++ ET VC+
Sbjct: 428 TGDCYSGDENPD-IECADCPIGFYNDPHD-PRS-CKPCPCHNGFSCSVMPETEEVVCN-- 482
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DPVGSLNRTCDPITG 139
+C P V G C+ C G++ GE C+ C C DP S N CD +TG
Sbjct: 483 ----NCPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGN--CDRLTG 536
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
+CL C G C+ C+ ++G L D C+ C C+P+GS + C G C
Sbjct: 537 RCLKCIHNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPMGSEPVGCRSDGTC 591
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 43 GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C C GY D+ L P G C PC C G CD TG C
Sbjct: 390 GQFCQDCASGYKRDSARLGPFGTCIPCNCQGGG---------ACDPDTGDCYSGDENPDI 440
Query: 102 NCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR---PGVTGTRCELCQP 157
C C +G YN CK C C + + P T + +C PGVTG RCELC
Sbjct: 441 ECADCPIGFYNDPHDPRSCKPCPCH--NGFSCSVMPETEEVVCNNCPPGVTGARCELCAD 498
Query: 158 NHYG--FSLDG----CKPCMCDPIGSNSLQCDPSGQC 188
++G F G C+PC C+ N++ SG C
Sbjct: 499 GYFGDPFGEHGPVRPCQPCQCN----NNVDPSASGNC 531
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTC 134
++ CD TGQCSCKP V G CD+CE G +N S GC C+CDPVGS+ C
Sbjct: 800 SYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDC 859
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGV 191
+ +TG C C+ G+TG +C C PN + GC+ P + C+ C V
Sbjct: 860 EQMTGLCSCKTGITGMKCNQC-PNGSKMGMAGCEKDPSAPKSCEEMSCEFGATCVEV 915
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 114 ISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF------SLDG 166
+ GC S C C+P GS TCDP TGQC C+PGV G +C+ C+P + F S G
Sbjct: 784 VGAAGCPSTCQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDSKSG 843
Query: 167 CKPCMCDPIGSNSLQCD 183
C PC CDP+GS C+
Sbjct: 844 CTPCNCDPVGSVRDDCE 860
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGY--FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
TG C C GG +CD C PG+ F + K C PC C G++ + C+Q
Sbjct: 808 ATGQC-SCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDD-----CEQ 861
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
+TG CSCK + G C+QC G S G C+ DP S ++C+ ++
Sbjct: 862 MTGLCSCKTGITGMKCNQCPNG-----SKMGMAGCEKDP--SAPKSCEEMS 905
>sp|Q24568|NETB_DROME Netrin-B OS=Drosophila melanogaster GN=NetB PE=1 SV=1
Length = 793
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 37 CIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
C +NT GP+C+ C P YF G A +C+ CQC G F +L+G+
Sbjct: 463 CKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQC--NGHARRCRFNLELYKLSGRV 520
Query: 93 S------CKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRTCDPITGQC 141
S C+ G C C G+Y + + CK CDC PVGS +TC+ ++GQC
Sbjct: 521 SGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLSGQC 580
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS 185
C+ GVTG C C Y + PC+ P +N +Q + +
Sbjct: 581 PCKEGVTGLTCNRC-ARGYQQTRSHVAPCIKVPTNANMIQAESA 623
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP--KGDCEPCQCYIPGTLETETFTPVCDQLT 89
G C C ++T G C C GY+ DA P + C+ C C+ G+ C+ L+
Sbjct: 523 GVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGST-----GKTCNHLS 577
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIIS 115
GQC CK V G C++C G+ S
Sbjct: 578 GQCPCKEGVTGLTCNRCARGYQQTRS 603
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 23/131 (17%)
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG-------CKSCDCDPVG---SLN 131
T + +LT C+CK + G C++C+ +++ G CK C C+ N
Sbjct: 451 TQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCNGHARRCRFN 510
Query: 132 RTCDPITGQCL------CRPGVTGTRCELCQPNHYGFS------LDGCKPCMCDPIGSNS 179
++G+ C+ TG C C+ +Y + CK C C P+GS
Sbjct: 511 LELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTG 570
Query: 180 LQCDP-SGQCP 189
C+ SGQCP
Sbjct: 571 KTCNHLSGQCP 581
>sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=2
Length = 604
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G+Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPVA 457
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C GY+ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYYRD-MGKPITHRKACKACDCHPVGAA-----GKTCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDCDPVG---SLNRTCDPITGQ- 140
C C+ + G CD+C+ HY+ C +C+C+ N ++G+
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRK 363
Query: 141 ----CL-CRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CL CR G C C+ +Y CK C C P+G+ C+ +GQC
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQC 423
Query: 189 P 189
P
Sbjct: 424 P 424
>sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1
Length = 600
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G++ I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGVTCNRCAKG-YQQSRSPIAPCIKIPVA 457
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C GYF D L P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYFRD-LGKPITHRKACKACDCHPVGAA-----GKTCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGVTCNRCAKGY 441
Score = 37.0 bits (84), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDCDPVG---SLNRTCDPITGQ- 140
C C+ + G CD+C+ HY+ C +C+C+ N ++G+
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRK 363
Query: 141 ----CL-CRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CL CR G C C+ ++ CK C C P+G+ C+ +GQC
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQC 423
Query: 189 P 189
P
Sbjct: 424 P 424
>sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=1 SV=1
Length = 604
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPVA 457
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C G++ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRD-MGKPITHRKACKACDCHPVGAA-----GKTCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
Score = 37.0 bits (84), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 23/121 (19%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDCDPVG---SLNRTCDPITGQ- 140
C C+ + G CD+C+ HY+ C +C+C+ N ++G+
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRK 363
Query: 141 ----CL-CRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CL CR G C C+ Y CK C C P+G+ C+ +GQC
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQC 423
Query: 189 P 189
P
Sbjct: 424 P 424
>sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=3
Length = 604
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPVA 457
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C G++ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRD-MGKPITHRKACKACDCHPVGAA-----GKTCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
Score = 37.0 bits (84), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 23/121 (19%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDCDPVG---SLNRTCDPITGQ- 140
C C+ + G CD+C+ HY+ C +C+C+ N ++G+
Sbjct: 304 CDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRK 363
Query: 141 ----CL-CRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CL CR G C C+ Y CK C C P+G+ C+ +GQC
Sbjct: 364 SGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQC 423
Query: 189 P 189
P
Sbjct: 424 P 424
>sp|P34710|UNC6_CAEEL Netrin unc-6 OS=Caenorhabditis elegans GN=unc-6 PE=1 SV=1
Length = 612
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 37 CIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT G +C+ C P ++ G A A C C C + E F ++
Sbjct: 312 CKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSG 371
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G NC C+ G + + CKSC C PVGSL ++C+ +GQC+C
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSSGQCVC 431
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
+PGVTGT C C Y S PC+ P ++ +
Sbjct: 432 KPGVTGTTCNRCAKG-YQQSRSTVTPCIKIPTKADFI 467
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C PG+ D +LP + C+ C C+ G+L C+Q
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGFVRDT-SLPMTHRKACKSCGCHPVGSLGKS-----CNQS 425
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
+GQC CKP V GT C++C G+
Sbjct: 426 SGQCVCKPGVTGTTCNRCAKGY 447
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 32/129 (24%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDCDPVGS--------LNRTCDP 136
C CK + GT C+ C+ HY+ S C +C+C+ + +
Sbjct: 310 CDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNR 369
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGFSLD---------GCKPCMCDPIGSNSLQCD-PS 185
G CL CR G C LC+P GF D CK C C P+GS C+ S
Sbjct: 370 SGGVCLNCRHNTAGRNCHLCKP---GFVRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSS 426
Query: 186 GQC---PGV 191
GQC PGV
Sbjct: 427 GQCVCKPGV 435
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIIS-----GEGCKSCDCDPVGSLNRTC 134
+++ CD +TGQCSC+P V G CD+CE G +N GC C CDP G++ C
Sbjct: 695 SYSGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDC 754
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+ +TG C CRPGV G +C C P+ GC+ P+ + C+ C
Sbjct: 755 EQMTGLCSCRPGVAGPKCGQC-PDGQALGHLGCEADPTTPVTCVEMHCEFGASC 807
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 60 LPKGDCEPCQ-CYIP--GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG 116
L K CE Q Y+ G T P+ + C+ P+ C Q V +
Sbjct: 626 LKKARCEARQELYVAAQGACRGPTLAPLLPMASPHCAQTPY----GCCQDNVTAAQGVGL 681
Query: 117 EGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS------LDGCKP 169
GC S C C+P GS + TCDP+TGQC CRPGV G RC+ C+P + F GC P
Sbjct: 682 AGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTP 741
Query: 170 CMCDPIGSNSLQCD 183
C CDP G+ C+
Sbjct: 742 CSCDPRGAVRDDCE 755
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQ 87
TG C C GG +CD C PG++ + G C PC C G + + C+Q
Sbjct: 703 VTGQC-SCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDD-----CEQ 756
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
+TG CSC+P V G C QC G + GC++ PV + C+
Sbjct: 757 MTGLCSCRPGVAGPKCGQCPDGQ--ALGHLGCEADPTTPVTCVEMHCE 802
>sp|Q90922|NET1_CHICK Netrin-1 OS=Gallus gallus GN=NTN1 PE=1 SV=1
Length = 606
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 37 CIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 308 CKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 367
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y +S + CK CDC PVG+ +TC+ TGQC C
Sbjct: 368 GVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQTTGQCPC 427
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCM 171
+ GVTG C C Y S PC+
Sbjct: 428 KDGVTGITCNRCAKG-YQQSRSPIAPCI 454
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C G++ D L+ P + C+ C C+ G C+Q
Sbjct: 368 GVCLNCRHNTAGRHCHYCKEGFYRD-LSKPISHRKACKECDCHPVGAA-----GQTCNQT 421
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 422 TGQCPCKDGVTGITCNRCAKGY 443
Score = 37.4 bits (85), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 23/121 (19%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDCDPVG---SLNRTCDPITGQ- 140
C CK + G CD+C+ HY+ C +C+C+ N ++G+
Sbjct: 306 CDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRK 365
Query: 141 ----CL-CRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CL CR G C C+ Y CK C C P+G+ C+ +GQC
Sbjct: 366 SGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQTTGQC 425
Query: 189 P 189
P
Sbjct: 426 P 426
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYN----IISGE-GCKSCDCDPVGSLNRTC 134
++ CD TGQCSC+P V G CD+CE G +N + G GC C CDP G++ C
Sbjct: 800 SYGGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDC 859
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+ +TG C C+PGV G +C C P+ GC+ P ++C+ +C
Sbjct: 860 EQMTGLCSCKPGVAGPKCGQC-PDGRALGPAGCEADASAPATCAEMRCEFGARC 912
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 96 PHVVGTNCDQCEVG--HYNIISGEGC------KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
P V +C Q G NI + G +C C+P GS TCDP TGQC CRPGV
Sbjct: 759 PPVAPLHCAQTPYGCCQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGV 818
Query: 148 TGTRCELCQPNHYGFS------LDGCKPCMCDPIGSNSLQCD 183
G RC+ C+P + F GC PC CDP G+ C+
Sbjct: 819 GGLRCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDCE 860
>sp|Q90923|NET3_CHICK Netrin-3 (Fragment) OS=Gallus gallus GN=NTN3 PE=2 SV=1
Length = 581
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 37 CIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 283 CKHNTEGPECDRCKPFHYDRPWQRASAREANECLACNCNLHARRCRFNMELYKLSGRKSG 342
Query: 90 GQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y +I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 343 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQCPC 402
Query: 144 RPGVTGTRCELC 155
+ GVTG C C
Sbjct: 403 KDGVTGLTCNRC 414
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGD--ALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
G CL C +NT G C C G++ D + C+ C C+ G C+Q T
Sbjct: 343 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAA-----GKTCNQTT 397
Query: 90 GQCSCKPHVVGTNCDQCEVG 109
GQC CK V G C++C G
Sbjct: 398 GQCPCKDGVTGLTCNRCAKG 417
Score = 37.0 bits (84), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 23/121 (19%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-------IISGEGCKSCDCDPVG---SLNRTCDPITGQ- 140
C CK + G CD+C+ HY+ C +C+C+ N ++G+
Sbjct: 281 CDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLACNCNLHARRCRFNMELYKLSGRK 340
Query: 141 ----CL-CRPGVTGTRCELCQPNHYG------FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CL CR G C C+ Y CK C C P+G+ C+ +GQC
Sbjct: 341 SGGVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQC 400
Query: 189 P 189
P
Sbjct: 401 P 401
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.494
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,080,673
Number of Sequences: 539616
Number of extensions: 3919993
Number of successful extensions: 11481
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 6748
Number of HSP's gapped (non-prelim): 2336
length of query: 204
length of database: 191,569,459
effective HSP length: 112
effective length of query: 92
effective length of database: 131,132,467
effective search space: 12064186964
effective search space used: 12064186964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)