Query psy15475
Match_columns 204
No_of_seqs 152 out of 1700
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 22:02:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15475.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15475hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1klo_A Laminin; glycoprotein; 99.9 3.5E-26 1.2E-30 172.6 4.9 146 20-168 2-161 (162)
2 1klo_A Laminin; glycoprotein; 99.9 3.2E-22 1.1E-26 150.8 5.3 125 68-201 1-146 (162)
3 4aqs_A Laminin subunit beta-1; 99.8 1.5E-20 5E-25 165.8 7.7 170 32-201 343-525 (525)
4 2gy5_A Angiopoietin-1 receptor 99.7 8.6E-18 2.9E-22 144.2 8.7 132 48-202 188-321 (423)
5 4aqs_A Laminin subunit beta-1; 99.7 1.4E-16 4.9E-21 140.3 12.8 171 30-201 277-475 (525)
6 2gy5_A Angiopoietin-1 receptor 99.7 1.8E-17 6.1E-22 142.3 5.6 154 19-197 203-379 (423)
7 2ygq_A WIF-1, WNT inhibitory f 99.4 4.6E-13 1.6E-17 111.2 9.8 24 179-202 286-309 (324)
8 3fcs_B Integrin beta-3; beta p 99.4 2.7E-12 9.3E-17 115.7 11.3 107 16-153 437-559 (690)
9 2y38_A Laminin subunit alpha-5 99.3 5.9E-12 2E-16 106.6 7.8 108 5-115 252-383 (403)
10 3k6s_B Integrin beta-2; cell r 99.2 9.1E-12 3.1E-16 112.1 7.3 138 21-201 437-592 (687)
11 4aqt_A Laminin subunit gamma-1 99.2 1.3E-11 4.5E-16 103.9 6.9 118 5-125 241-370 (375)
12 4aqt_A Laminin subunit gamma-1 99.2 5.1E-12 1.7E-16 106.4 3.6 101 67-172 254-369 (375)
13 2y38_A Laminin subunit alpha-5 99.2 2.7E-11 9.2E-16 102.6 6.2 99 67-176 265-396 (403)
14 2vj2_A Jagged-1; signalling, p 99.1 6.9E-12 2.4E-16 94.7 1.4 110 49-201 54-169 (169)
15 3zyj_B Netrin-G1; cell adhesio 99.1 6.7E-11 2.3E-15 100.6 4.3 120 4-146 282-419 (426)
16 2vj3_A Neurogenic locus notch 99.1 2.6E-10 8.8E-15 82.9 6.3 110 12-154 4-119 (135)
17 4d90_A EGF-like repeat and dis 99.0 8.5E-10 2.9E-14 80.6 8.9 117 15-154 2-133 (143)
18 2ygq_A WIF-1, WNT inhibitory f 99.0 2.5E-10 8.7E-15 94.6 6.4 71 19-104 153-243 (324)
19 2vj3_A Neurogenic locus notch 99.0 2.5E-10 8.5E-15 82.9 5.4 109 61-203 4-121 (135)
20 4d90_A EGF-like repeat and dis 98.9 3.1E-09 1.1E-13 77.6 6.2 114 64-202 2-134 (143)
21 2vj2_A Jagged-1; signalling, p 98.9 8.9E-10 3.1E-14 83.0 3.0 94 32-154 50-169 (169)
22 3zyj_B Netrin-G1; cell adhesio 98.9 8E-10 2.7E-14 94.0 2.8 107 65-193 294-419 (426)
23 3fcs_B Integrin beta-3; beta p 98.8 5.9E-09 2E-13 94.1 7.6 120 65-201 437-600 (690)
24 3k6s_B Integrin beta-2; cell r 98.8 2.2E-09 7.7E-14 96.6 2.8 110 48-183 496-622 (687)
25 2p28_B Integrin beta-2; hybrid 98.4 8.2E-08 2.8E-12 75.0 3.1 104 21-154 98-214 (217)
26 4fbr_A Lectin, myxobacterial h 98.3 6.2E-10 2.1E-14 89.2 -12.6 32 168-203 170-204 (267)
27 1tpg_A T-plasminogen activator 98.3 5.5E-07 1.9E-11 60.7 3.6 80 45-154 3-86 (91)
28 1tpg_A T-plasminogen activator 98.3 4.3E-07 1.5E-11 61.2 2.7 78 14-105 2-86 (91)
29 2p28_B Integrin beta-2; hybrid 98.2 2.5E-07 8.5E-12 72.3 1.1 96 89-203 106-216 (217)
30 1z1y_A Ookinete surface protei 98.2 8.7E-09 3E-13 78.6 -7.3 106 63-202 45-176 (186)
31 1z1y_A Ookinete surface protei 98.1 5.4E-08 1.8E-12 74.2 -4.4 91 43-155 73-176 (186)
32 1yo8_A Thrombospondin-2; EGF, 98.1 3.7E-06 1.3E-10 75.1 5.3 110 12-153 2-145 (634)
33 4fbr_A Lectin, myxobacterial h 98.0 3E-09 1E-13 85.2 -14.5 156 20-198 39-266 (267)
34 2bou_A EGF-like module contain 97.9 4.9E-06 1.7E-10 60.5 2.7 116 19-153 7-133 (143)
35 2wg3_C Hedgehog-interacting pr 97.8 3.1E-06 1E-10 73.3 0.5 76 48-154 380-455 (463)
36 2bou_A EGF-like module contain 97.8 1.5E-05 5.1E-10 57.9 3.6 105 69-201 8-134 (143)
37 1yo8_A Thrombospondin-2; EGF, 97.7 8.9E-06 3E-10 72.7 2.3 107 62-201 3-146 (634)
38 3u7u_G Neuregulin 1; signaling 97.7 1.7E-05 5.8E-10 48.1 2.1 41 56-105 2-49 (55)
39 2wg3_C Hedgehog-interacting pr 97.5 1.5E-05 5E-10 69.0 -0.1 55 132-202 402-456 (463)
40 2c4f_L Coagulation factor VII 97.4 6.1E-05 2.1E-09 54.7 2.3 74 61-153 46-128 (142)
41 1x7a_L Coagulation factor IX, 97.4 0.00011 3.8E-09 53.6 3.3 68 61-153 47-125 (146)
42 2c4f_L Coagulation factor VII 97.3 2.5E-05 8.7E-10 56.7 -0.7 73 11-105 45-129 (142)
43 3h5c_B Vitamin K-dependent pro 97.2 0.00072 2.5E-08 55.2 6.6 69 11-101 3-76 (317)
44 1edm_B Factor IX; epidermal gr 97.1 0.00049 1.7E-08 38.2 3.3 34 62-104 3-38 (39)
45 1nfu_B Coagulation factor XA, 97.0 0.00013 4.3E-09 55.9 0.1 74 10-105 39-121 (195)
46 1uzk_A Fibrillin-1; glycoprote 96.9 6E-05 2.1E-09 55.8 -1.8 112 62-198 3-156 (162)
47 1aut_L Activated protein C; se 96.9 0.00053 1.8E-08 47.7 2.7 62 70-151 22-87 (114)
48 2w86_A Fibrillin-1, fibrillin1 96.9 0.00017 6E-09 52.4 0.1 43 48-101 91-140 (147)
49 2vh0_B Activated factor XA lig 96.8 0.00019 6.5E-09 51.5 0.1 73 11-105 40-121 (134)
50 1nfu_B Coagulation factor XA, 96.6 0.00025 8.4E-09 54.3 -0.4 70 61-153 41-120 (195)
51 1uzk_A Fibrillin-1; glycoprote 96.5 0.0003 1E-08 52.0 -0.6 57 90-151 75-156 (162)
52 1dx5_I Thrombomodulin; serine 96.5 0.00032 1.1E-08 49.2 -0.8 46 42-100 59-110 (118)
53 1emn_A Fibrillin; extracellula 96.4 0.0047 1.6E-07 40.2 4.9 64 62-150 5-76 (82)
54 1x7a_L Coagulation factor IX, 96.4 0.0016 5.6E-08 47.3 2.9 37 10-47 45-83 (146)
55 2w86_A Fibrillin-1, fibrillin1 96.4 0.00011 3.9E-09 53.4 -3.5 33 61-103 3-37 (147)
56 3u7u_G Neuregulin 1; signaling 96.4 0.0013 4.5E-08 39.7 1.9 36 11-47 6-48 (55)
57 2vh0_B Activated factor XA lig 96.4 0.00046 1.6E-08 49.5 -0.4 70 61-153 41-120 (134)
58 3h5c_B Vitamin K-dependent pro 96.3 0.0063 2.2E-07 49.5 6.0 65 62-150 5-76 (317)
59 1edm_B Factor IX; epidermal gr 96.3 0.0025 8.5E-08 35.3 2.3 35 12-47 2-38 (39)
60 3tbd_A Netrin-G2, laminet-2; l 96.1 0.0056 1.9E-07 50.5 4.5 52 5-59 256-312 (338)
61 1aut_L Activated protein C; se 96.0 0.0016 5.5E-08 45.2 1.0 68 11-100 4-85 (114)
62 1z6c_A Vitamin K-dependent pro 96.0 0.0042 1.4E-07 40.9 2.8 52 39-104 20-77 (87)
63 1egf_A Epidermal growth factor 96.0 0.0075 2.6E-07 35.8 3.7 40 63-111 4-50 (53)
64 1a3p_A Epidermal growth factor 95.8 0.0065 2.2E-07 34.8 2.9 32 65-105 3-41 (45)
65 1k36_A Epiregulin; EGF-like fo 95.8 0.003 1E-07 36.5 1.3 32 64-105 5-43 (46)
66 1dx5_I Thrombomodulin; serine 95.8 0.00031 1.1E-08 49.2 -3.7 46 89-150 60-111 (118)
67 1emn_A Fibrillin; extracellula 95.8 0.0028 9.5E-08 41.3 1.1 50 40-101 22-76 (82)
68 1z6c_A Vitamin K-dependent pro 95.7 0.0085 2.9E-07 39.3 3.5 52 85-153 18-77 (87)
69 3ca7_A Protein spitz; argos, E 95.7 0.00077 2.6E-08 40.1 -1.7 29 68-105 14-48 (52)
70 1lmj_A Fibrillin 1; EGF, calci 95.4 0.0073 2.5E-07 39.5 2.1 51 85-150 18-79 (86)
71 1hae_A Heregulin-alpha; growth 95.3 0.0033 1.1E-07 38.8 0.3 34 63-105 7-47 (63)
72 2ygo_A WIF-1, WNT inhibitory f 95.2 0.014 4.8E-07 43.9 3.4 37 117-154 144-180 (188)
73 1egf_A Epidermal growth factor 95.0 0.033 1.1E-06 32.9 4.2 36 12-48 2-44 (53)
74 1a3p_A Epidermal growth factor 94.9 0.021 7.3E-07 32.5 2.8 25 130-154 13-41 (45)
75 2k2s_B Micronemal protein 6; m 94.7 0.0057 1.9E-07 37.6 0.0 35 62-105 11-50 (61)
76 1lmj_A Fibrillin 1; EGF, calci 94.6 0.0088 3E-07 39.1 0.8 46 44-101 25-79 (86)
77 1k36_A Epiregulin; EGF-like fo 93.2 0.019 6.3E-07 33.1 0.3 34 12-47 2-42 (46)
78 1nql_B Epidermal growth factor 93.2 0.042 1.4E-06 32.6 1.9 33 67-108 11-47 (53)
79 2w2n_E LDL receptor, low-densi 93.0 0.036 1.2E-06 37.9 1.6 50 85-150 43-100 (107)
80 2w2n_E LDL receptor, low-densi 92.9 0.021 7E-07 39.1 0.3 51 37-100 43-99 (107)
81 1hae_A Heregulin-alpha; growth 92.5 0.042 1.4E-06 33.7 1.2 33 14-47 7-46 (63)
82 3fl7_A Ephrin receptor; ATP-bi 92.1 0.078 2.7E-06 46.5 2.9 56 88-148 261-319 (536)
83 3ltf_D Protein spitz; receptor 91.4 0.053 1.8E-06 32.8 0.8 28 69-105 15-48 (58)
84 2k2s_B Micronemal protein 6; m 91.4 0.036 1.2E-06 34.0 -0.0 34 12-46 10-48 (61)
85 3fl7_A Ephrin receptor; ATP-bi 91.2 0.078 2.7E-06 46.5 1.9 59 132-195 256-319 (536)
86 1nql_B Epidermal growth factor 90.7 0.086 2.9E-06 31.2 1.2 25 130-154 16-44 (53)
87 3v65_B Low-density lipoprotein 89.8 0.078 2.7E-06 44.2 0.7 50 43-105 23-83 (386)
88 3ltf_D Protein spitz; receptor 89.5 0.093 3.2E-06 31.7 0.7 30 130-159 18-54 (58)
89 3tbd_A Netrin-G2, laminet-2; l 88.6 0.14 4.7E-06 42.2 1.3 38 67-112 269-308 (338)
90 3ca7_A Protein spitz; argos, E 88.3 0.11 3.7E-06 30.5 0.4 27 20-47 15-47 (52)
91 2ygo_A WIF-1, WNT inhibitory f 87.4 0.29 9.8E-06 36.8 2.3 25 178-202 157-181 (188)
92 1q4g_A Prostaglandin G/H synth 87.1 0.26 8.7E-06 43.4 2.2 35 62-105 2-40 (553)
93 3p5b_L Low density lipoprotein 86.7 0.56 1.9E-05 39.1 4.0 50 85-150 14-71 (400)
94 3p5b_L Low density lipoprotein 86.0 0.2 6.7E-06 42.0 0.8 47 42-101 19-71 (400)
95 3nt1_A Prostaglandin-endoperox 84.7 0.38 1.3E-05 42.6 2.0 34 63-105 2-39 (587)
96 2fd6_A Urokinase-type plasmino 84.2 0.45 1.5E-05 33.1 1.8 29 68-105 1-34 (122)
97 3v65_B Low-density lipoprotein 83.5 0.29 1E-05 40.6 0.8 48 90-153 24-82 (386)
98 3e50_C Protransforming growth 83.3 0.48 1.6E-05 27.6 1.4 16 139-154 30-45 (50)
99 1iox_A Betacellulin; EGF-like 82.9 0.42 1.4E-05 27.8 1.0 15 140-154 31-45 (50)
100 2rnl_A Amphiregulin; AR, color 82.3 0.65 2.2E-05 27.0 1.7 15 140-154 35-49 (50)
101 2p26_A Integrin beta-2; hybrid 81.9 0.82 2.8E-05 36.6 2.7 17 32-50 207-223 (280)
102 2hey_R Tumor necrosis factor r 80.9 0.69 2.4E-05 33.1 1.8 63 44-112 38-110 (146)
103 1g1s_A P-selectin; selectin, l 78.9 0.53 1.8E-05 33.9 0.7 32 65-105 122-155 (162)
104 1n7d_A LDL receptor, low-densi 78.7 5.1 0.00017 36.0 7.2 51 37-100 308-364 (699)
105 2p26_A Integrin beta-2; hybrid 78.4 0.9 3.1E-05 36.4 1.9 16 138-153 206-221 (280)
106 2i9a_A Urokinase-type plasmino 77.9 1.1 3.9E-05 32.1 2.2 30 67-105 12-46 (145)
107 2e26_A Reelin, reeler protein; 76.2 0.49 1.7E-05 42.7 -0.3 23 130-154 543-565 (725)
108 3qd6_R CD40L receptor, tumor n 75.1 3.5 0.00012 30.4 4.3 17 147-163 118-134 (177)
109 1q4g_A Prostaglandin G/H synth 71.4 1.8 6.1E-05 38.1 2.1 34 14-48 3-40 (553)
110 3nt1_A Prostaglandin-endoperox 70.1 1.8 6E-05 38.4 1.8 33 118-154 3-39 (587)
111 2fd6_A Urokinase-type plasmino 69.4 2.1 7.2E-05 29.6 1.8 25 130-154 5-34 (122)
112 1xdt_R Hbegf, heparin-binding 69.0 1.8 6.1E-05 27.7 1.2 16 139-154 62-77 (79)
113 2uwi_A CRME protein; receptor, 68.2 2 6.9E-05 30.6 1.5 26 43-69 35-60 (142)
114 1n7d_A LDL receptor, low-densi 66.0 19 0.00064 32.3 7.8 12 138-149 353-364 (699)
115 3cfw_A L-selectin; EGF, cell a 63.8 3.8 0.00013 29.3 2.3 32 65-105 122-155 (164)
116 1g1s_A P-selectin; selectin, l 63.1 1.7 5.8E-05 31.1 0.3 24 37-61 133-156 (162)
117 3cfw_A L-selectin; EGF, cell a 62.0 4 0.00014 29.1 2.1 24 131-154 130-155 (164)
118 2e26_A Reelin, reeler protein; 59.4 0.66 2.3E-05 41.9 -3.0 41 155-201 522-565 (725)
119 2i9a_A Urokinase-type plasmino 59.3 5.3 0.00018 28.5 2.3 29 122-154 13-46 (145)
120 3asi_A Neurexin-1-alpha; beta- 58.3 7.4 0.00025 32.3 3.4 39 58-105 181-222 (410)
121 3urf_Z Tumor necrosis factor r 57.1 1.8 6.1E-05 31.9 -0.5 9 103-111 20-28 (171)
122 3m0c_C LDL receptor, low-densi 56.5 22 0.00075 32.5 6.4 49 85-149 326-382 (791)
123 1g1t_A E-selectin; EGF, adhesi 55.2 2.9 9.9E-05 29.6 0.3 21 85-105 133-155 (157)
124 1apq_A Complement protease C1R 37.9 20 0.00068 20.1 2.1 16 85-100 26-43 (53)
125 1sg1_X Tumor necrosis factor r 37.0 9.6 0.00033 27.4 0.7 13 150-162 116-128 (161)
126 3qcw_A Neurexin-1-alpha; synap 36.3 24 0.00081 34.0 3.5 39 58-105 1013-1054(1245)
127 3u3p_A Tumor necrosis factor r 36.3 7.4 0.00025 31.5 -0.0 9 103-111 26-34 (313)
128 1jma_B Herpesvirus entry media 35.0 6.8 0.00023 28.5 -0.4 12 100-111 13-24 (167)
129 3k51_B Decoy receptor 3; DCR3, 34.9 5.2 0.00018 29.5 -1.0 9 103-111 22-30 (176)
130 4fhq_A Tumor necrosis factor r 33.8 11 0.00039 26.3 0.6 26 43-69 36-61 (134)
131 3m0c_C LDL receptor, low-densi 33.3 20 0.00069 32.7 2.3 46 42-100 331-382 (791)
132 1ext_A Tumor necrosis factor r 31.1 14 0.00049 26.6 0.8 9 46-54 20-28 (162)
133 3t3p_B Integrin beta-3; integr 28.9 18 0.00061 31.1 1.1 15 139-153 458-472 (472)
134 1gl4_A Nidogen-1, entactin; im 28.9 10 0.00035 30.3 -0.3 34 62-104 5-44 (285)
135 3tje_F Tumor necrosis factor r 26.7 22 0.00077 25.5 1.2 7 105-111 112-118 (156)
136 3qcw_A Neurexin-1-alpha; synap 26.5 27 0.00092 33.6 2.0 34 63-105 620-656 (1245)
137 3asi_A Neurexin-1-alpha; beta- 25.2 32 0.0011 28.4 2.0 32 15-47 187-221 (410)
138 3t3p_B Integrin beta-3; integr 22.9 27 0.00093 29.9 1.1 15 90-104 458-472 (472)
139 3me4_A Tumor necrosis factor r 20.7 16 0.00054 27.8 -0.7 12 100-111 43-54 (216)
140 3v4v_B Integrin beta-7; cell a 20.5 21 0.00073 30.8 0.0 15 139-153 479-493 (503)
No 1
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.92 E-value=3.5e-26 Score=172.56 Aligned_cols=146 Identities=37% Similarity=0.860 Sum_probs=117.6
Q ss_pred CCCCCCCccCCC----CccccCCCCcCCCCCCCCCCCCCCCCCCC--CCCCCcCCCCCCCCccCCCCCCCcccCCCceee
Q psy15475 20 PSDILKSVAGTT----GDCLKCIYNTGGPQCDTCLPGYFGDALAL--PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93 (204)
Q Consensus 20 ~~~~~~~C~~~~----g~C~~C~~~~~G~~C~~C~~g~~g~~c~~--~~~~C~~c~C~~~g~~~~~~~~~~C~~~~g~C~ 93 (204)
|+.++++|+..+ ++|+.|+++|+|.+|++|++||||.++.. ....|++++|++++..... +. |+..+++|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~-~~--C~~~tG~C~ 78 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAV-GN--CNRLTGECL 78 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCS-CC--BCTTTCCBC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccC-Cc--ccCCCCccc
Confidence 466788997765 47956999999999999999999987752 2246889999877532111 02 888899995
Q ss_pred -cCCCCccCCCcccCCCccccCCC----CCCccCCCCCCCCCC--CcccCCCCeeecCCCCccCCCCCCCCCcccCCC-C
Q psy15475 94 -CKPHVVGTNCDQCEVGHYNIISG----EGCKSCDCDPVGSLN--RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL-D 165 (204)
Q Consensus 94 -C~~g~~G~~C~~C~~G~~g~~~~----~~C~~c~C~~~g~~~--~~C~~~~g~C~C~~g~~G~~C~~C~~g~~g~~~-~ 165 (204)
|+++|+|.+|++|++||||.... ..|++|.|++.++.. ++|+..+|+|.|+++|+|++|++|++|||+++. .
T Consensus 79 ~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~C~~g~~g~~~~~ 158 (162)
T 1klo_A 79 KCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQ 158 (162)
T ss_dssp CBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGGGSS
T ss_pred CCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCCCCCCcccCCCCC
Confidence 99999999999999999986433 568899999877643 389998999999999999999999999999864 4
Q ss_pred CCc
Q psy15475 166 GCK 168 (204)
Q Consensus 166 ~c~ 168 (204)
+|+
T Consensus 159 GC~ 161 (162)
T 1klo_A 159 GCE 161 (162)
T ss_dssp CCB
T ss_pred CcC
Confidence 454
No 2
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.85 E-value=3.2e-22 Score=150.82 Aligned_cols=125 Identities=27% Similarity=0.721 Sum_probs=103.4
Q ss_pred CCCCCCCccCCCCCCCcccCCC----cee-ecCCCCccCCCcccCCCccccCCC-----CCCccCCCCCCCCC--CCccc
Q psy15475 68 CQCYIPGTLETETFTPVCDQLT----GQC-SCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSL--NRTCD 135 (204)
Q Consensus 68 c~C~~~g~~~~~~~~~~C~~~~----g~C-~C~~g~~G~~C~~C~~G~~g~~~~-----~~C~~c~C~~~g~~--~~~C~ 135 (204)
++|.++++ |+..+ ++| .|+++|+|.+|++|++|||+.... ..|.+|.|++.+.. .++|+
T Consensus 1 C~C~~~g~---------C~~~~~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~ 71 (162)
T 1klo_A 1 CPCPGGSS---------CAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCN 71 (162)
T ss_dssp CCSCTTCC---------EEECSSSCCEEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBC
T ss_pred CcCcCcCc---------ccccCCCCCEEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCccc
Confidence 46777777 86543 589 699999999999999999985432 36888999875432 25798
Q ss_pred CCCCeee-cCCCCccCCCCCCCCCcccCCCC-----CCccccCCCCCCCCC--CCC-CCCcccCCCCCCcccCCc
Q psy15475 136 PITGQCL-CRPGVTGTRCELCQPNHYGFSLD-----GCKPCMCDPIGSNSL--QCD-PSGQCPGVFMNRAEMSSD 201 (204)
Q Consensus 136 ~~~g~C~-C~~g~~G~~C~~C~~g~~g~~~~-----~c~~C~C~~~g~~~~--~C~-~~g~C~c~~~~~g~~~~~ 201 (204)
..+|+|. |+++|+|++|++|++||||..+. .|++|.|++.++++. .|+ .+|+|+|+++|+|+.|++
T Consensus 72 ~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 72 RLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp TTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCE
T ss_pred CCCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCC
Confidence 8899995 99999999999999999998754 689999999887654 899 799999999999999863
No 3
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.82 E-value=1.5e-20 Score=165.77 Aligned_cols=170 Identities=39% Similarity=0.849 Sum_probs=88.5
Q ss_pred CccccCCCCcCCCCCCCCCCCCCCCCCCCC--CCCCcCCCCCCCCccCCCC----CCCcccCCCceeecCCCCccCCCcc
Q psy15475 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP--KGDCEPCQCYIPGTLETET----FTPVCDQLTGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 32 g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~--~~~C~~c~C~~~g~~~~~~----~~~~C~~~~g~C~C~~g~~G~~C~~ 105 (204)
+.|..|.++|.|..|+.|.++|++...... ...+.++.|...+...... ....+....+.|.|.++|.|.+|++
T Consensus 343 g~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~~G~~C~~ 422 (525)
T 4aqs_A 343 GVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDV 422 (525)
T ss_dssp EEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSCCCBCTTEETTTTCE
T ss_pred CcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCccCCCCCCCCCcccC
Confidence 445579999999999999999998766522 2234455555433221110 0000222356789999999999999
Q ss_pred cCCCccccCC--CCCCccCCCCCCCC--CCCcccCCCCeeecCCCCccCCCCCCCCCcccCCC--CCCccccCCCCCCCC
Q psy15475 106 CEVGHYNIIS--GEGCKSCDCDPVGS--LNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNS 179 (204)
Q Consensus 106 C~~G~~g~~~--~~~C~~c~C~~~g~--~~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~g~~~--~~c~~C~C~~~g~~~ 179 (204)
|++||+|... ...|.++.|++.++ ..+.|+..+|+|.|++||+|.+|++|++|||+... .+|.+|+|++.++..
T Consensus 423 C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~ 502 (525)
T 4aqs_A 423 CKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALN 502 (525)
T ss_dssp ECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------------------------
T ss_pred CCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccC
Confidence 9999998543 34688889988765 34678888899999999999999999999999653 679999999999888
Q ss_pred CCCC-CCCcccCCCCCCcccCCc
Q psy15475 180 LQCD-PSGQCPGVFMNRAEMSSD 201 (204)
Q Consensus 180 ~~C~-~~g~C~c~~~~~g~~~~~ 201 (204)
..|+ .+|+|+|++||+|.+|++
T Consensus 503 ~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 503 NSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp -----------------------
T ss_pred CccCCCCCeeECCCCCcCCCCCC
Confidence 8999 789999999999999975
No 4
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.72 E-value=8.6e-18 Score=144.24 Aligned_cols=132 Identities=25% Similarity=0.557 Sum_probs=105.6
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCccCCCCCCCcccCCCceeecCCCCccCCCcc-cCCCccccCCCCCCccCCCCC
Q psy15475 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDP 126 (204)
Q Consensus 48 ~C~~g~~g~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~~~~g~C~C~~g~~G~~C~~-C~~G~~g~~~~~~C~~c~C~~ 126 (204)
.|.+||+|+.|+. .|. +|.++++ |...++.|.|++||.|.+|+. |.++|+|..+.. .|.++.
T Consensus 188 ~C~~g~~G~~C~~---~C~--~C~~~G~---------C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~---~C~~~~ 250 (423)
T 2gy5_A 188 RCEAQKWGPECNH---LCT--ACMNNGV---------CHEDTGECICPPGFMGRTCEKACELHTFGRTCKE---RCSGQE 250 (423)
T ss_dssp SSCTTEESTTSCE---ECC--CCCTTCE---------ECTTTCCEECCTTEESTTSCEECCTTEESTTSCE---ECCSTT
T ss_pred cCCCCCCCCCCCC---CCC--CCCCCCE---------EECCCCcEeCCCCccCCCcccccCCCCCCCCcCc---cCCCCC
Confidence 6899999988873 243 5778888 987788999999999999996 999999643322 344333
Q ss_pred CCCCCCcccCCCCeeecCCCCccCCCCC-CCCCcccCCCCCCccccCCCCCCCCCCCCCCCcccCCCCCCcccCCcc
Q psy15475 127 VGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSDD 202 (204)
Q Consensus 127 ~g~~~~~C~~~~g~C~C~~g~~G~~C~~-C~~g~~g~~~~~c~~C~C~~~g~~~~~C~~~g~C~c~~~~~g~~~~~~ 202 (204)
....+++|+..+++|.|++||+|.+|+. |++||+|..+. .+|+|.+.+ .|+....|.|.++|+|.+|++.
T Consensus 251 ~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~--~~C~C~ngg----~C~~~~~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 251 GCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCK--LRCSCNNGE----MCDRFQGCLCSPGWQGLQCERE 321 (423)
T ss_dssp TTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTC--CBCCCTTCC----EEETTTEEECCTTCBSTTSCBC
T ss_pred CCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCccc--ccccCCCCC----EecCCCceECCCCCcCCCCccC
Confidence 3345677887789999999999999996 99999998776 478888744 7985445999999999999876
No 5
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.69 E-value=1.4e-16 Score=140.34 Aligned_cols=171 Identities=30% Similarity=0.724 Sum_probs=120.4
Q ss_pred CCCccccCCCCcCCCCCCCCCCCCCCCCCC----CCCCCCcCCCCCCCCccCCCCC-C--CcccCCCcee-ecCCCCccC
Q psy15475 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALA----LPKGDCEPCQCYIPGTLETETF-T--PVCDQLTGQC-SCKPHVVGT 101 (204)
Q Consensus 30 ~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~----~~~~~C~~c~C~~~g~~~~~~~-~--~~C~~~~g~C-~C~~g~~G~ 101 (204)
..+.|. |+++|.|.+|++|.++|++.++. .....+..+.|+.++....... . .......+.| .|.++|.|.
T Consensus 277 ~~g~C~-C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~ 355 (525)
T 4aqs_A 277 VHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGR 355 (525)
T ss_dssp CCCEEC-CCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCCCCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEEST
T ss_pred cCcccc-CcCCCcCCCCcCCCCccCCCccCCCcccCCCcccccccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCC
Confidence 456796 99999999999999999998775 1223355666766554210000 0 0011124555 599999999
Q ss_pred CCcccCCCccccCC-----CCCCccCCCCCCCCC-CCcc--------cCCCCeeecCCCCccCCCCCCCCCcccCCC---
Q psy15475 102 NCDQCEVGHYNIIS-----GEGCKSCDCDPVGSL-NRTC--------DPITGQCLCRPGVTGTRCELCQPNHYGFSL--- 164 (204)
Q Consensus 102 ~C~~C~~G~~g~~~-----~~~C~~c~C~~~g~~-~~~C--------~~~~g~C~C~~g~~G~~C~~C~~g~~g~~~--- 164 (204)
+|+.|.++|++... ...+..|.|.+.+.. ...| ....+.|.|+++|.|.+|++|++||||..+
T Consensus 356 ~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~C~C~~g~~G~~C~~C~~Gy~G~~c~~~ 435 (525)
T 4aqs_A 356 NCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDP 435 (525)
T ss_dssp TSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSCCCBCTTEETTTTCEECTTEECCCTTST
T ss_pred CcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCccCCCCCCCCCcccCCCCCCcCCCCCCC
Confidence 99999999996422 223446666654321 1122 223567999999999999999999999875
Q ss_pred CCCccccCCCCCCC--CCCCC-CCCcccCCCCCCcccCCc
Q psy15475 165 DGCKPCMCDPIGSN--SLQCD-PSGQCPGVFMNRAEMSSD 201 (204)
Q Consensus 165 ~~c~~C~C~~~g~~--~~~C~-~~g~C~c~~~~~g~~~~~ 201 (204)
.+|.+|.|.+.++. ...|+ .+|+|+|+++|+|..|++
T Consensus 436 ~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 436 YGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp TSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC
T ss_pred CCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc
Confidence 46899999887654 45788 799999999999999963
No 6
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.68 E-value=1.8e-17 Score=142.29 Aligned_cols=154 Identities=25% Similarity=0.498 Sum_probs=113.7
Q ss_pred CCCCCCCCccCCCCccccCCCCcCCCCCCC-CCCCCCCCCCCCCCCCCc-CCCCCCCCccCCCCCCCcccCCCceeecCC
Q psy15475 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDT-CLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKP 96 (204)
Q Consensus 19 ~~~~~~~~C~~~~g~C~~C~~~~~G~~C~~-C~~g~~g~~c~~~~~~C~-~c~C~~~g~~~~~~~~~~C~~~~g~C~C~~ 96 (204)
.||.+++.|...++.|. |+++|.|.+|+. |.++|+|..|.. .|. ..+|.+++. |...++.|.|++
T Consensus 203 ~~C~~~G~C~~~~g~C~-C~~G~~G~~Ce~~C~~g~~g~~C~~---~C~~~~~C~~~g~---------C~~~~~~C~C~~ 269 (423)
T 2gy5_A 203 TACMNNGVCHEDTGECI-CPPGFMGRTCEKACELHTFGRTCKE---RCSGQEGCKSYVF---------CLPDPYGCSCAT 269 (423)
T ss_dssp CCCCTTCEECTTTCCEE-CCTTEESTTSCEECCTTEESTTSCE---ECCSTTTTTTCCE---------EETTTTEEECCB
T ss_pred CCCCCCCEEECCCCcEe-CCCCccCCCcccccCCCCCCCCcCc---cCCCCCCCCCCCE---------ECCCCCeEEeCC
Confidence 47888899988788996 999999999986 999999988762 243 234665565 877789999999
Q ss_pred CCccCCCcc-cCCCccccCCCCCCc-cCCCCCCCCCCCcccCCCCeeecCCCCccCCCCCC------------------C
Q psy15475 97 HVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELC------------------Q 156 (204)
Q Consensus 97 g~~G~~C~~-C~~G~~g~~~~~~C~-~c~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~C------------------~ 156 (204)
+|.|.+|+. |.+||+|. .|. .|+|. ++++|+... .|.|++||+|.+|+++ .
T Consensus 270 G~~G~~C~~~C~~G~~G~----~C~~~C~C~----ngg~C~~~~-~C~C~~G~~G~~Ce~~~~~~~~~~~~~~~~~~~c~ 340 (423)
T 2gy5_A 270 GWKGLQCNEACHPGFYGP----DCKLRCSCN----NGEMCDRFQ-GCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVN 340 (423)
T ss_dssp TCBSGGGCBCCCTTBCSB----TTCCBCCCT----TCCEEETTT-EEECCTTCBSTTSCBCSSCCCCCEECSCCSBCCEE
T ss_pred CcccccccCccCCCCcCC----cccccccCC----CCCEecCCC-ceECCCCCcCCCCccCccCCcCcceecCCCeEEeC
Confidence 999999996 99999964 443 45676 467898754 4999999999999976 3
Q ss_pred CCcccCCCCCCccccCCCCCCCCCC-CCCCCcccCCCCCCcc
Q psy15475 157 PNHYGFSLDGCKPCMCDPIGSNSLQ-CDPSGQCPGVFMNRAE 197 (204)
Q Consensus 157 ~g~~g~~~~~c~~C~C~~~g~~~~~-C~~~g~C~c~~~~~g~ 197 (204)
+||||. .|..+.+......... +..+|.|++..++.+.
T Consensus 341 ~g~~g~---~C~~~~~~~~~~~~~~~~~~~G~cl~~~~~~~~ 379 (423)
T 2gy5_A 341 SGKFNP---ICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHT 379 (423)
T ss_dssp SEEECC---EEEEECTTCCCGGGEEEECTTSCEECCSEEEEC
T ss_pred CCccCC---cccccCCcCCCCceEEEECCCeEEEeCCCcCcc
Confidence 456663 3455555322212222 3368999988876553
No 7
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.43 E-value=4.6e-13 Score=111.15 Aligned_cols=24 Identities=8% Similarity=0.104 Sum_probs=0.0
Q ss_pred CCCCCCCCcccCCCCCCcccCCcc
Q psy15475 179 SLQCDPSGQCPGVFMNRAEMSSDD 202 (204)
Q Consensus 179 ~~~C~~~g~C~c~~~~~g~~~~~~ 202 (204)
.+.|.++++|.|.+||+|.+|++.
T Consensus 286 ~g~C~~~~~C~C~~G~~G~~C~~~ 309 (324)
T 2ygq_A 286 HGTCHEPNKCQCQEGWHGRHCNKR 309 (324)
T ss_dssp ------------------------
T ss_pred CCEECCCCEeECCCCCcCCCCCCC
Confidence 347887899999999999999876
No 8
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.37 E-value=2.7e-12 Score=115.70 Aligned_cols=107 Identities=27% Similarity=0.629 Sum_probs=65.7
Q ss_pred ccCCCCCCCCCccCC-----CCccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcCC----CCCCCCccCCCCCCCccc
Q psy15475 16 CVGPPSDILKSVAGT-----TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC----QCYIPGTLETETFTPVCD 86 (204)
Q Consensus 16 c~~~~~~~~~~C~~~-----~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~c----~C~~~g~~~~~~~~~~C~ 86 (204)
|...|+.+++.|... .|.|. |.++|.|..| .+..++++.... +.|... +|.++|+ |.
T Consensus 437 C~~~pc~n~~~C~~g~G~~~~G~C~-C~~Gy~G~~C-e~~~~~~~~~~~---~~C~~~~~~~~Cs~~G~---------C~ 502 (690)
T 3fcs_B 437 CQAQAEPNSHRCNNGNGTFECGVCR-CGPGWLGSQC-ECSEEDYRPSQQ---DECSPREGQPVCSQRGE---------CL 502 (690)
T ss_dssp GGTTCCTTCTTTTTTSEEEETTEEE-ECTTCCSSSS-CCSCC------C---CCCSSSSSSCGGGGSEE---------EC
T ss_pred CcCCCCCCCCcccCCCCeEeCCceE-eCCCccCCce-eeccCccCCccC---CcCCCCCCCCCCCCCCE---------EE
Confidence 333578888999732 34575 8999999988 566555543322 346542 3777777 86
Q ss_pred CCCceeecC----CCCccCCCcccCCCccccCCCCCCcc---CCCCCCCCCCCcccCCCCeeecCCCCccCCCC
Q psy15475 87 QLTGQCSCK----PHVVGTNCDQCEVGHYNIISGEGCKS---CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153 (204)
Q Consensus 87 ~~~g~C~C~----~g~~G~~C~~C~~G~~g~~~~~~C~~---c~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~ 153 (204)
.+.|.|. ++|.|.+|+. . ...|.. ..|. ++++|.. ++|.|++||+|..|+
T Consensus 503 --~g~C~C~~~~~~Gy~G~~Ce~-~--------~~~C~~~~~~~C~----~~G~C~~--g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 503 --CGQCVCHSSDFGKITGKYCEC-D--------DFSCVRYKGEMCS----GHGQCSC--GDCLCDSDWTGYYCN 559 (690)
T ss_dssp --SSSEEECCCSSCCCBSTTSCB-C--------SSCCCBSSSSBGG----GSEEEET--TEEEECTTEESSSSC
T ss_pred --CCeeEeecCCCCCeeCCCcCc-c--------cCcCcCCCCCCCC----CCCEecC--CeeECcCCCcCCCCc
Confidence 4899999 9999999973 0 112221 1232 3456653 677777777777776
No 9
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.28 E-value=5.9e-12 Score=106.61 Aligned_cols=108 Identities=26% Similarity=0.491 Sum_probs=73.8
Q ss_pred ceeeeeeeccc---ccCCCCCCCCCccCC------CCccccCCCCcCCCCCCCCCCCCCCCCCC----CCCCCCcCCCCC
Q psy15475 5 VHHVSVMDILL---CVGPPSDILKSVAGT------TGDCLKCIYNTGGPQCDTCLPGYFGDALA----LPKGDCEPCQCY 71 (204)
Q Consensus 5 ~~~~~~~~~~~---c~~~~~~~~~~C~~~------~g~C~~C~~~~~G~~C~~C~~g~~g~~c~----~~~~~C~~c~C~ 71 (204)
.+.+++.++.. |.|+ .+...|+.. .++|. |+++|+|.+|++|.+||+|.++. ...+.|.+|+|+
T Consensus 252 ~yyyai~~~~vgg~C~Cn--GHA~~C~~~~~~~~~~g~C~-C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cn 328 (403)
T 2y38_A 252 RYYYSIKDISIGGRCVCH--GHADVCDAKDPLDPFRLQCA-CQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCH 328 (403)
T ss_dssp GCCCEEEEEEEEEECCCT--TBCSCEEESCTTSTTCEEEC-CCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCT
T ss_pred cceeecccCccccccccC--CCccccCCCCCCCccceEeE-CcCcCcCCCCCCCCccccCCcccccccCCCccccccccC
Confidence 45566666544 5442 223346532 36795 99999999999999999998763 223479999999
Q ss_pred CCCccCCC-------CCC---CcccCCCceee-cCCCCccCCCcccCCCccccCC
Q psy15475 72 IPGTLETE-------TFT---PVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIIS 115 (204)
Q Consensus 72 ~~g~~~~~-------~~~---~~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~~ 115 (204)
+++..... ..+ ..+...+|+|. |+++++|.+|++|++||||...
T Consensus 329 ghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~ 383 (403)
T 2y38_A 329 GHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPD 383 (403)
T ss_dssp TSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTT
T ss_pred CCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCC
Confidence 88752100 000 00223478996 9999999999999999998543
No 10
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.24 E-value=9.1e-12 Score=112.10 Aligned_cols=138 Identities=25% Similarity=0.568 Sum_probs=89.2
Q ss_pred CCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcCC----CCCCCCccCCCCCCCcccCCCceeecC-
Q psy15475 21 SDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC----QCYIPGTLETETFTPVCDQLTGQCSCK- 95 (204)
Q Consensus 21 ~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~c----~C~~~g~~~~~~~~~~C~~~~g~C~C~- 95 (204)
|..++.|. .+.|. |.++|.|..|+ |..++++.... ...|.+. +|.++|+ |. .+.|.|.
T Consensus 437 Cs~~G~C~--~g~C~-C~~Gy~G~~Ce-c~~~~~~~~~~--~~~C~~~~~~~~Cs~~G~---------C~--~G~C~C~~ 499 (687)
T 3k6s_B 437 CHGKGFLE--CGICR-CDTGYIGKNCE-CQTQGRSSQEL--EGSCRKDNNSIICSGLGD---------CV--CGQCLCHT 499 (687)
T ss_dssp GGGSEEES--SSSEE-ECSSEESTTSC-EESSSCCCSGG--GSTTSSSTTSCGGGSSEE---------EE--TTEEEECC
T ss_pred CCCCCEEe--CCEeE-cCCCCcCCccc-ccCCcCCcccc--CCCCCCCCCCCcCCCCCE---------Ee--CCEEEcCC
Confidence 33444443 46785 99999999995 66665543211 1135443 3777776 86 4799999
Q ss_pred -----CCCccCCCcccCCCccccCCCCCCcc---CCCCCCCCC--CCcccCCCCeeecCCCCccCCCCCCCCCcccCCCC
Q psy15475 96 -----PHVVGTNCDQCEVGHYNIISGEGCKS---CDCDPVGSL--NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD 165 (204)
Q Consensus 96 -----~g~~G~~C~~C~~G~~g~~~~~~C~~---c~C~~~g~~--~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~g~~~~ 165 (204)
++|.|.+|+.= ...|.. -.|. . +++|. .++|.|++||+|..|+ |+... .
T Consensus 500 ~~~~~~G~~G~~Ce~~---------~~~C~~~~~~~C~----~~~~G~C~--~g~C~C~~G~~G~~Ce-c~~~~-----~ 558 (687)
T 3k6s_B 500 SDVPGKLIYGQYCECD---------TINCERYNGQVCG----GPGRGLCF--CGKCRCHPGFEGSACQ-CERTT-----E 558 (687)
T ss_dssp CCSTTCCEESTTSCEE---------SSCSCEETTEETS----HHHHEEEE--TTEEEECTTCCSTTSC-SCCSS-----C
T ss_pred CCCCCCCccccccccc---------cccccCCCCcCcC----CCCCCeEE--CCEEEcCCCCcCCCCc-cCCCC-----C
Confidence 99999999730 112221 1233 3 46787 4799999999999998 43211 1
Q ss_pred CCcc---ccCCCCCCCCCCCCCCCcccCCCCCCcccCCc
Q psy15475 166 GCKP---CMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSD 201 (204)
Q Consensus 166 ~c~~---C~C~~~g~~~~~C~~~g~C~c~~~~~g~~~~~ 201 (204)
.|.. ..|.+.| .|.. |+|.|.+||+|..|++
T Consensus 559 ~C~~~~g~~Cs~~G----~C~~-g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 559 GCLNPRRVECSGRG----RCRC-NVCECHSGYQLPLCQE 592 (687)
T ss_dssp TTBCTTCSBTSSSC----CBCS-SCBCCSTTCCTTTTCC
T ss_pred CCCCCCCCCCCCCC----cCCC-CEEECCCCCcCCCCCC
Confidence 2332 3566544 6774 8999999999999986
No 11
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.22 E-value=1.3e-11 Score=103.89 Aligned_cols=118 Identities=19% Similarity=0.431 Sum_probs=79.4
Q ss_pred ceeeeeeeccc---ccCCCCCCCCCcc--C-CCCccccCCCCcCCCCCCCCCCCCCCCCCC----CCCCCCcCCCCCCCC
Q psy15475 5 VHHVSVMDILL---CVGPPSDILKSVA--G-TTGDCLKCIYNTGGPQCDTCLPGYFGDALA----LPKGDCEPCQCYIPG 74 (204)
Q Consensus 5 ~~~~~~~~~~~---c~~~~~~~~~~C~--~-~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~----~~~~~C~~c~C~~~g 74 (204)
.+.++|.+|.+ |.|. .++..|. . ..+.|. |+++|.|.+|++|.+||++.++. .....|.+|.|+.++
T Consensus 241 ~yyYai~di~v~g~C~Cn--gh~s~c~~~~~~~~~C~-C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g 317 (375)
T 4aqt_A 241 SYYYAISDFAVGGRCKCN--GHASECVKNEFDKLMCN-CKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRS 317 (375)
T ss_dssp TCCCEEEEEEEEEEECCT--TSCSCEEECTTSCEEEC-CCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSC
T ss_pred cceeeecccccCceecCC--CCCcccCCCCCCCeeee-CcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCC
Confidence 35566666644 4443 2333332 2 233474 99999999999999999998875 223469999998777
Q ss_pred ccCCCCCC-CcccCCCceee-cCCCCccCCCcccCCCccccCCCCCCccCCCC
Q psy15475 75 TLETETFT-PVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCD 125 (204)
Q Consensus 75 ~~~~~~~~-~~C~~~~g~C~-C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~ 125 (204)
+....... ..|...+|.|. |+++|+|.+|++|++|||+....+.|++|.-+
T Consensus 318 ~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~~~~~C~pCaA~ 370 (375)
T 4aqt_A 318 QECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPAAAH 370 (375)
T ss_dssp SCEEECHHHHHHSSCCEEECSCTTTEESTTSCEECSSEECCTTCSSCEEC---
T ss_pred CCcccccccCccCCCCCCCCCCCCCCcCCCCCCCCcCcccCcCCCCCcCCcCc
Confidence 63110000 01344578994 99999999999999999987666677776543
No 12
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.21 E-value=5.1e-12 Score=106.40 Aligned_cols=101 Identities=24% Similarity=0.586 Sum_probs=72.8
Q ss_pred CCCCCCCCccCCCCCCCcccCCCceeecCCCCccCCCcccCCCccccC-------CCCCCccCCCCCCCCCC------Cc
Q psy15475 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII-------SGEGCKSCDCDPVGSLN------RT 133 (204)
Q Consensus 67 ~c~C~~~g~~~~~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~-------~~~~C~~c~C~~~g~~~------~~ 133 (204)
.|.|++++..... +....+.|.|+++|.|.+|++|.+||++.. ....|.+|.|+..++.- ..
T Consensus 254 ~C~Cngh~s~c~~-----~~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~ 328 (375)
T 4aqt_A 254 RCKCNGHASECVK-----NEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYR 328 (375)
T ss_dssp EECCTTSCSCEEE-----CTTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHH
T ss_pred eecCCCCCcccCC-----CCCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCc
Confidence 4678777652110 122345789999999999999999999753 23568899998755310 12
Q ss_pred ccCCCCeee-cCCCCccCCCCCCCCCcccCCC-CCCccccC
Q psy15475 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMC 172 (204)
Q Consensus 134 C~~~~g~C~-C~~g~~G~~C~~C~~g~~g~~~-~~c~~C~C 172 (204)
|...+|+|. |++||+|.+|++|.+|||+.+. .+|++|.-
T Consensus 329 c~~~~G~C~~C~~n~~G~~Ce~C~~Gyyg~~~~~~C~pCaA 369 (375)
T 4aqt_A 329 STGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPAAA 369 (375)
T ss_dssp HSSCCEEECSCTTTEESTTSCEECSSEECCTTCSSCEEC--
T ss_pred cCCCCCCCCCCCCCCcCCCCCCCCcCcccCcCCCCCcCCcC
Confidence 445678995 9999999999999999999764 56777743
No 13
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.17 E-value=2.7e-11 Score=102.56 Aligned_cols=99 Identities=31% Similarity=0.741 Sum_probs=74.5
Q ss_pred CCCCCCCCccCCCCCCCcccC------CCceeecCCCCccCCCcccCCCccccC-------CCCCCccCCCCCCCCCCCc
Q psy15475 67 PCQCYIPGTLETETFTPVCDQ------LTGQCSCKPHVVGTNCDQCEVGHYNII-------SGEGCKSCDCDPVGSLNRT 133 (204)
Q Consensus 67 ~c~C~~~g~~~~~~~~~~C~~------~~g~C~C~~g~~G~~C~~C~~G~~g~~-------~~~~C~~c~C~~~g~~~~~ 133 (204)
+|.|++++. . |+. ..+.|.|+++++|.+|++|.+|||+.. ....|.+|.|+..+. .
T Consensus 265 ~C~CnGHA~------~--C~~~~~~~~~~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~---~ 333 (403)
T 2y38_A 265 RCVCHGHAD------V--CDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAY---D 333 (403)
T ss_dssp ECCCTTBCS------C--EEESCTTSTTCEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCS---C
T ss_pred ccccCCCcc------c--cCCCCCCCccceEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCc---c
Confidence 578888776 2 642 246799999999999999999999752 235799999986432 2
Q ss_pred c------------------cCCCCeee-cCCCCccCCCCCCCCCcccCCCCC-CccccCCCCC
Q psy15475 134 C------------------DPITGQCL-CRPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIG 176 (204)
Q Consensus 134 C------------------~~~~g~C~-C~~g~~G~~C~~C~~g~~g~~~~~-c~~C~C~~~g 176 (204)
| ...+|+|. |+.+++|.+||+|.+||||.+..+ ..+-.|.+..
T Consensus 334 C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CErC~~GYyg~p~~~~~~~~~C~~~~ 396 (403)
T 2y38_A 334 CYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPAA 396 (403)
T ss_dssp EEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSCEECTTCEECTTSCTTSTTSEECCC
T ss_pred cccCcccccccccccccccCCCCCCCCCCcCcCcCCCCCcCCCCccCCCCCCCCCCCcccccc
Confidence 3 23478996 999999999999999999977532 3455555543
No 14
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.14 E-value=6.9e-12 Score=94.73 Aligned_cols=110 Identities=26% Similarity=0.563 Sum_probs=68.8
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCC-CCCccCCCCCCCcccCCCceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCC
Q psy15475 49 CLPGYFGDALALPKGDCEPCQCY-IPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127 (204)
Q Consensus 49 C~~g~~g~~c~~~~~~C~~c~C~-~~g~~~~~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~ 127 (204)
|.+||+|..|+.+ .|.. .|. .+++ |.. ++.|.|.++|.|..|+.|... . .|.
T Consensus 54 C~~G~~G~~C~~~--~C~~-~C~~~~g~---------C~~-~~~C~C~~G~~G~~C~~C~~~-------~-----~C~-- 106 (169)
T 2vj2_A 54 CMEGWMGPECNRA--ICRQ-GCSPKHGS---------CKL-PGDCRCQYGWQGLYCDKCIPH-------P-----GCV-- 106 (169)
T ss_dssp ECTTEESTTSCEE--CCCT-TCCTTTEE---------CSS-TTCCEECTTEESSSSCEECCC-------T-----TCS--
T ss_pred CCCCCcCCCCCCC--CCCC-CCCCCCcc---------cCC-CCeeECCCCCCCCCcccCCCC-------C-----CCC--
Confidence 6777887777632 2432 243 3344 654 567788888888777765431 0 122
Q ss_pred CCCCCcccCCCCeeecCCCCccCCCCCCCCCcccCCCCCCcc-ccCCCCCCCCCCCCC----CCcccCCCCCCcccCCc
Q psy15475 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP----SGQCPGVFMNRAEMSSD 201 (204)
Q Consensus 128 g~~~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~g~~~~~c~~-C~C~~~g~~~~~C~~----~g~C~c~~~~~g~~~~~ 201 (204)
+++|. .+++|.|++||+|..|+.- .+.|.. .+|.+.+ .|.+ +++|+|.+||+|.+|+.
T Consensus 107 ---~g~C~-~~~~C~C~~G~~G~~C~~~--------~~~C~~~~~C~~~g----~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 107 ---HGICN-EPWQCLCETNWGGQLCDKD--------LNYCGTHQPCLNGG----TCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp ---SEECS-STTCCEECTTEETTTTCEE--------SCHHHHTCCCCTTC----EEEECSTTCEEEECCTTCCSTTSCC
T ss_pred ---CCCcC-CCCEEeCCCCCCCCcccCC--------CCCCCCCCCCCCCC----EEcCCCCCCcEeECCCCCcCcCcCC
Confidence 23565 3678889999988888631 123442 4566543 6763 48999999999999863
No 15
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.07 E-value=6.7e-11 Score=100.58 Aligned_cols=120 Identities=24% Similarity=0.480 Sum_probs=47.1
Q ss_pred Cceeeeeeeccc---ccCCCCCCCCCccCCCC--ccccCCCCcCCCCCCCCCCCCCCCCCCC---------CCCCCcCCC
Q psy15475 4 DVHHVSVMDILL---CVGPPSDILKSVAGTTG--DCLKCIYNTGGPQCDTCLPGYFGDALAL---------PKGDCEPCQ 69 (204)
Q Consensus 4 ~~~~~~~~~~~~---c~~~~~~~~~~C~~~~g--~C~~C~~~~~G~~C~~C~~g~~g~~c~~---------~~~~C~~c~ 69 (204)
..++++|.|+.. |.|+ .++..|....+ +|. |+++|+|+.|++|.++|++.++.. ....|.+|+
T Consensus 282 ~~yyYAI~d~~v~g~C~Cn--GHas~C~~~~g~~~C~-C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~ 358 (426)
T 3zyj_B 282 ARYFYAISDIKVRGRCKCN--LHATVCVYDNSKLTCE-CEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSI 358 (426)
T ss_dssp GGCCCEEEEEECEEEECCS--SSCSCEEEETTEEEEC-CCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCC
T ss_pred ceecceeecccccccCcCC--CchhhcCCCCCCceee-CCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCC
Confidence 346777777755 4442 34467876544 797 999999999999999999887741 234688888
Q ss_pred CCCCCccCCCCCCCcccCCCceee----cCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccCCCCeeecCC
Q psy15475 70 CYIPGTLETETFTPVCDQLTGQCS----CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145 (204)
Q Consensus 70 C~~~g~~~~~~~~~~C~~~~g~C~----C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~~~g~C~C~~ 145 (204)
|..++. . |+..++.|. |..+. +| +|++||+| ..|..+.|++ +++|+..+|+|.-+-
T Consensus 359 Cn~~g~------~--CD~~t~~C~ngg~C~~~~---~C-~C~~G~~G----~~Ce~c~C~~----~g~C~~~~Gqc~~~~ 418 (426)
T 3zyj_B 359 SSIGTN------V--CDNELLHCQNGGTCHNNV---RC-LCPAAYTG----ILCEKLRCEE----AGSCGSDSGQGAPPH 418 (426)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred CCCCcC------c--cccCcccCCCCCCcCCCC---CC-cCCCCCcC----CCCcCCCCCC----CCcccCCCCccCCCC
Confidence 876654 2 766566665 66655 78 89999994 4588888885 466988889887554
Q ss_pred C
Q psy15475 146 G 146 (204)
Q Consensus 146 g 146 (204)
|
T Consensus 419 ~ 419 (426)
T 3zyj_B 419 G 419 (426)
T ss_dssp -
T ss_pred C
Confidence 4
No 16
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.05 E-value=2.6e-10 Score=82.85 Aligned_cols=110 Identities=30% Similarity=0.616 Sum_probs=71.6
Q ss_pred eccccc--CCCCCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCccCCCCCCCcccCC-
Q psy15475 12 DILLCV--GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL- 88 (204)
Q Consensus 12 ~~~~c~--~~~~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~~~- 88 (204)
||..|. ..|+.+++.|....+ ++.| .|++||.|..|+.++++|...+|.++++ |...
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g----------~~~C-~C~~Gy~G~~C~~~~~~C~~~~C~~~~~---------C~~~~ 63 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLG----------SFEC-QCLQGYTGPRCEIDVNECVSNPCQNDAT---------CLDQI 63 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSS----------SEEE-ECCTTEESTTSCEECCTTTTCCCCSSCE---------EEECS
T ss_pred ccccccCCCCCCCCCCEeECCCC----------CEEE-ECCCCCcCCcccccCccCCCCCCCCCCE---------EeCCC
Confidence 566676 457777777755433 2233 3444445555544456688778888777 8654
Q ss_pred -CceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccCCC--CeeecCCCCccCCCCC
Q psy15475 89 -TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT--GQCLCRPGVTGTRCEL 154 (204)
Q Consensus 89 -~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~~~--g~C~C~~g~~G~~C~~ 154 (204)
.+.|.|++||.|.+|++- .+.|...+|. ++++|.... ++|.|++||+|.+|+.
T Consensus 64 g~~~C~C~~G~~G~~C~~~---------~~~C~~~~C~----~~g~C~~~~g~~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 64 GEFQCICMPGYEGVHCEVN---------TDECASSPCL----HNGRCLDKINEFQCECPTGFTGHLCQV 119 (135)
T ss_dssp SCEEEECCTTEESSSSCEE---------CCTTTTCCST----TTCEEEECSSCEEEECCTTEESSSSCE
T ss_pred CCceeeCCCCCcCCcceec---------CCcccCCCcC----CCCEeECCCCCeEEECCCCCcCCccCc
Confidence 358999999999998741 2345544555 356676433 4799999999999863
No 17
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.05 E-value=8.5e-10 Score=80.61 Aligned_cols=117 Identities=21% Similarity=0.492 Sum_probs=77.4
Q ss_pred cccCCCCCCCCCccCCC----CccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCccCCCCCCCccc----
Q psy15475 15 LCVGPPSDILKSVAGTT----GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD---- 86 (204)
Q Consensus 15 ~c~~~~~~~~~~C~~~~----g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~---- 86 (204)
.|...|+.++++|.... ..|. |+++|.|..|+....-.........++.|.+.+|.++++ |.
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~-C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~---------C~~~~~ 71 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCE-CPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGT---------CEISEA 71 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEE-CCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCE---------EEECCC
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeE-CCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCE---------ecCCCc
Confidence 36667888889997643 3685 999999988865322111111112345688888988887 75
Q ss_pred ---C--CCceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccCCCC--eeecCCCCccCCCCC
Q psy15475 87 ---Q--LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCEL 154 (204)
Q Consensus 87 ---~--~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~~~g--~C~C~~g~~G~~C~~ 154 (204)
+ ..+.|.|++||.|.+|++- .+.|...+|. ++++|....+ .|.|++||+|.+|+.
T Consensus 72 ~~~~~~~~~~C~C~~G~~G~~C~~~---------i~~C~~~~C~----~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 72 YRGDTFIGYVCKCPRGFNGIHCQHN---------INECEVEPCK----NGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp EETTEECCEEEECCTTEESTTSCEE---------CCTTTTCCSC----TTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred cccCCCCCeEeECcCCCcCCCcccC---------CCcCCCCCCC----CCCEeECCCCCeEeECCCCCccCCcee
Confidence 2 1458999999999999730 3455545555 4567765333 799999999999875
No 18
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.04 E-value=2.5e-10 Score=94.64 Aligned_cols=71 Identities=28% Similarity=0.703 Sum_probs=53.7
Q ss_pred CCCCCCCCccCCCCccccCCCCcCCCCCC--------------------CCCCCCCCCCCCCCCCCCcCCCCCCCCccCC
Q psy15475 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCD--------------------TCLPGYFGDALALPKGDCEPCQCYIPGTLET 78 (204)
Q Consensus 19 ~~~~~~~~C~~~~g~C~~C~~~~~G~~C~--------------------~C~~g~~g~~c~~~~~~C~~c~C~~~g~~~~ 78 (204)
.+|.+++.|.. .+.|. |+++|.|..|+ .|++||+|..|+.+ .|. .+|.++++
T Consensus 153 ~~C~~~G~C~~-~~~C~-C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~--~C~-~~C~~~G~--- 224 (324)
T 2ygq_A 153 GGCRNGGFCNE-RRICE-CPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKA--NCS-TTCFNGGT--- 224 (324)
T ss_dssp SCCCSSCEECT-TSCEE-CCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCBC--CCS-SCCCSSCC---
T ss_pred CCCCCCCEECC-CCeEE-CCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcccC--cCC-CCCCCCCe---
Confidence 47888899965 57896 99999998876 27788888888743 353 46777776
Q ss_pred CCCCCcccCCCceeecCCCCccCCCc
Q psy15475 79 ETFTPVCDQLTGQCSCKPHVVGTNCD 104 (204)
Q Consensus 79 ~~~~~~C~~~~g~C~C~~g~~G~~C~ 104 (204)
|.. .+.|.|.+||.|.+|+
T Consensus 225 ------C~~-~~~C~C~~G~~G~~C~ 243 (324)
T 2ygq_A 225 ------CFY-PGKCICPPGLEGEQCE 243 (324)
T ss_dssp ------BSC-SSCBCCCTTCCTTTTC
T ss_pred ------eCC-CCeeeCCCCccCCCCC
Confidence 765 5788888888888876
No 19
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.03 E-value=2.5e-10 Score=82.94 Aligned_cols=109 Identities=26% Similarity=0.504 Sum_probs=74.6
Q ss_pred CCCCCc--CCCCCCCCccCCCCCCCcccCCC--ceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccC
Q psy15475 61 PKGDCE--PCQCYIPGTLETETFTPVCDQLT--GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136 (204)
Q Consensus 61 ~~~~C~--~c~C~~~g~~~~~~~~~~C~~~~--g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~ 136 (204)
++++|. +.+|.++++ |.... .+|.|++||+|.+|++- ...|...+|. .+++|..
T Consensus 4 dideC~~~~~~C~~~g~---------C~~~~g~~~C~C~~Gy~G~~C~~~---------~~~C~~~~C~----~~~~C~~ 61 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGK---------CINTLGSFECQCLQGYTGPRCEID---------VNECVSNPCQ----NDATCLD 61 (135)
T ss_dssp CCCTTTSSSCSSSTTCE---------EEECSSSEEEECCTTEESTTSCEE---------CCTTTTCCCC----SSCEEEE
T ss_pred ccccccCCCCCCCCCCE---------eECCCCCEEEECCCCCcCCccccc---------CccCCCCCCC----CCCEEeC
Confidence 345676 567888887 86543 48999999999988741 2345544555 3466764
Q ss_pred CC--CeeecCCCCccCCCCCCCCCcccCCCCCCccccCCCCCCCCCCCC---CCCcccCCCCCCcccCCccc
Q psy15475 137 IT--GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD---PSGQCPGVFMNRAEMSSDDV 203 (204)
Q Consensus 137 ~~--g~C~C~~g~~G~~C~~C~~g~~g~~~~~c~~C~C~~~g~~~~~C~---~~g~C~c~~~~~g~~~~~~~ 203 (204)
.. +.|.|++||+|..|+.= .+.|..-+|.+. ++|. ...+|.|.+||+|..|+.+|
T Consensus 62 ~~g~~~C~C~~G~~G~~C~~~--------~~~C~~~~C~~~----g~C~~~~g~~~C~C~~G~~G~~C~~~i 121 (135)
T 2vj3_A 62 QIGEFQCICMPGYEGVHCEVN--------TDECASSPCLHN----GRCLDKINEFQCECPTGFTGHLCQVDL 121 (135)
T ss_dssp CSSCEEEECCTTEESSSSCEE--------CCTTTTCCSTTT----CEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred CCCCceeeCCCCCcCCcceec--------CCcccCCCcCCC----CEeECCCCCeEEECCCCCcCCccCccC
Confidence 33 47999999999988631 123444445543 3676 25689999999999998765
No 20
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.87 E-value=3.1e-09 Score=77.59 Aligned_cols=114 Identities=21% Similarity=0.413 Sum_probs=73.6
Q ss_pred CCcCCCCCCCCccCCCCCCCcccCC----CceeecCCCCccCCCcccC---CCccccCCCCCCccCCCCCCCCCCCcccC
Q psy15475 64 DCEPCQCYIPGTLETETFTPVCDQL----TGQCSCKPHVVGTNCDQCE---VGHYNIISGEGCKSCDCDPVGSLNRTCDP 136 (204)
Q Consensus 64 ~C~~c~C~~~g~~~~~~~~~~C~~~----~g~C~C~~g~~G~~C~~C~---~G~~g~~~~~~C~~c~C~~~g~~~~~C~~ 136 (204)
+|.+.+|.++++ |... ...|.|++||+|.+|+... .....-...+.|...+|. ++++|..
T Consensus 2 ~C~~~pC~~~g~---------C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~----~~g~C~~ 68 (143)
T 4d90_A 2 ICDPNPCENGGI---------CLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCH----NGGTCEI 68 (143)
T ss_dssp -CCSCCCGGGCE---------EEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCC----TTCEEEE
T ss_pred cCCCCcCCCCCE---------eeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCC----CCCEecC
Confidence 467778888887 8653 3589999999999998522 111111123455555555 3556752
Q ss_pred ---------CCCeeecCCCCccCCCCCCCCCcccCCCCCCccccCCCCCCCCCCCC---CCCcccCCCCCCcccCCcc
Q psy15475 137 ---------ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD---PSGQCPGVFMNRAEMSSDD 202 (204)
Q Consensus 137 ---------~~g~C~C~~g~~G~~C~~C~~g~~g~~~~~c~~C~C~~~g~~~~~C~---~~g~C~c~~~~~g~~~~~~ 202 (204)
..+.|.|++||.|.+|+. ..+.|..-+|.+. +.|. .+.+|.|.+||+|..|+..
T Consensus 69 ~~~~~~~~~~~~~C~C~~G~~G~~C~~--------~i~~C~~~~C~~~----~~C~~~~g~~~C~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 69 SEAYRGDTFIGYVCKCPRGFNGIHCQH--------NINECEVEPCKNG----GICTDLVANYSCECPGEFMGRNCQYK 134 (143)
T ss_dssp CCCEETTEECCEEEECCTTEESTTSCE--------ECCTTTTCCSCTT----CEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred CCccccCCCCCeEeECcCCCcCCCccc--------CCCcCCCCCCCCC----CEeECCCCCeEeECCCCCccCCceec
Confidence 245799999999999862 1123443445543 3676 2458999999999998765
No 21
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.86 E-value=8.9e-10 Score=83.05 Aligned_cols=94 Identities=32% Similarity=0.698 Sum_probs=62.7
Q ss_pred CccccCCCCcCCCCCC---------------------CCCCCCCCCCCCCCCCCCcCCC-CCCCCccCCCCCCCcccCCC
Q psy15475 32 GDCLKCIYNTGGPQCD---------------------TCLPGYFGDALALPKGDCEPCQ-CYIPGTLETETFTPVCDQLT 89 (204)
Q Consensus 32 g~C~~C~~~~~G~~C~---------------------~C~~g~~g~~c~~~~~~C~~c~-C~~~g~~~~~~~~~~C~~~~ 89 (204)
++|. |+++|+|..|+ .|++||+|..|+ +|...+ |.+ ++ |.. .
T Consensus 50 g~C~-C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~----~C~~~~~C~~-g~---------C~~-~ 113 (169)
T 2vj2_A 50 GNKT-CMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD----KCIPHPGCVH-GI---------CNE-P 113 (169)
T ss_dssp CCEE-ECTTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSC----EECCCTTCSS-EE---------CSS-T
T ss_pred CeeE-CCCCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCcc----cCCCCCCCCC-CC---------cCC-C
Confidence 4454 77777777664 366778887775 244333 543 34 763 6
Q ss_pred ceeecCCCCccCCCcccCCCccccCCCCCCcc-CCCCCCCCCCCcccC---CCCeeecCCCCccCCCCC
Q psy15475 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDP---ITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 90 g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~-c~C~~~g~~~~~C~~---~~g~C~C~~g~~G~~C~~ 154 (204)
++|.|+++|+|.+|++- .+.|.. .+|. ++++|.. ..++|.|++||+|.+|++
T Consensus 114 ~~C~C~~G~~G~~C~~~---------~~~C~~~~~C~----~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 114 WQCLCETNWGGQLCDKD---------LNYCGTHQPCL----NGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp TCCEECTTEETTTTCEE---------SCHHHHTCCCC----TTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CEEeCCCCCCCCcccCC---------CCCCCCCCCCC----CCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 78999999999988741 223432 4555 4567764 246899999999999974
No 22
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.85 E-value=8e-10 Score=93.98 Aligned_cols=107 Identities=25% Similarity=0.577 Sum_probs=38.8
Q ss_pred CcCCCCCCCCccCCCCCCCcccCCC--ceeecCCCCccCCCcccCCCccccC------------CCCCCccCCCCCCCCC
Q psy15475 65 CEPCQCYIPGTLETETFTPVCDQLT--GQCSCKPHVVGTNCDQCEVGHYNII------------SGEGCKSCDCDPVGSL 130 (204)
Q Consensus 65 C~~c~C~~~g~~~~~~~~~~C~~~~--g~C~C~~g~~G~~C~~C~~G~~g~~------------~~~~C~~c~C~~~g~~ 130 (204)
..+|.|++++. . |.... +.|.|+++|+|.+|++|.+||++.. ....|.+|.|+..
T Consensus 294 ~g~C~CnGHas------~--C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~--- 362 (426)
T 3zyj_B 294 RGRCKCNLHAT------V--CVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIG--- 362 (426)
T ss_dssp EEEECCSSSCS------C--EEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------
T ss_pred cccCcCCCchh------h--cCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCC---
Confidence 44678888765 2 76543 5899999999999999999998532 1235777777653
Q ss_pred CCcccCCCCeee----cCCCCccCCCCCCCCCcccCCCCCCccccCCCCCCCCCCCC-CCCcccCCCC
Q psy15475 131 NRTCDPITGQCL----CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQCPGVFM 193 (204)
Q Consensus 131 ~~~C~~~~g~C~----C~~g~~G~~C~~C~~g~~g~~~~~c~~C~C~~~g~~~~~C~-~~g~C~c~~~ 193 (204)
+..|+..++.|. |..+. +| .|++||+|.. |..|.|.+.| .|+ .+|+|.=..|
T Consensus 363 g~~CD~~t~~C~ngg~C~~~~---~C-~C~~G~~G~~---Ce~c~C~~~g----~C~~~~Gqc~~~~~ 419 (426)
T 3zyj_B 363 TNVCDNELLHCQNGGTCHNNV---RC-LCPAAYTGIL---CEKLRCEEAG----SCGSDSGQGAPPHG 419 (426)
T ss_dssp --------------------------------------------------------------------
T ss_pred cCccccCcccCCCCCCcCCCC---CC-cCCCCCcCCC---CcCCCCCCCC----cccCCCCccCCCCC
Confidence 346877777776 77665 88 8999999974 6778898755 699 7999986654
No 23
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.82 E-value=5.9e-09 Score=94.09 Aligned_cols=120 Identities=25% Similarity=0.623 Sum_probs=75.2
Q ss_pred CcCCCCCCCCccCCCCCCCcccCC-----CceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccCCCC
Q psy15475 65 CEPCQCYIPGTLETETFTPVCDQL-----TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139 (204)
Q Consensus 65 C~~c~C~~~g~~~~~~~~~~C~~~-----~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~~~g 139 (204)
|...+|.+.+. |.+. .+.|.|.+||.|.+|+ +..++++....+.|....-.+..+++++|. .+
T Consensus 437 C~~~pc~n~~~---------C~~g~G~~~~G~C~C~~Gy~G~~Ce-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g 504 (690)
T 3fcs_B 437 CQAQAEPNSHR---------CNNGNGTFECGVCRCGPGWLGSQCE-CSEEDYRPSQQDECSPREGQPVCSQRGECL--CG 504 (690)
T ss_dssp GGTTCCTTCTT---------TTTTSEEEETTEEEECTTCCSSSSC-CSCC------CCCCSSSSSSCGGGGSEEEC--SS
T ss_pred CcCCCCCCCCc---------ccCCCCeEeCCceEeCCCccCCcee-eccCccCCccCCcCCCCCCCCCCCCCCEEE--CC
Confidence 55556666665 6522 4568999999999996 455555444445565422001122567787 58
Q ss_pred eeecC----CCCccCCCCC-------------------------CCCCcccCCCC------CCcc---ccCCCCCCCCCC
Q psy15475 140 QCLCR----PGVTGTRCEL-------------------------CQPNHYGFSLD------GCKP---CMCDPIGSNSLQ 181 (204)
Q Consensus 140 ~C~C~----~g~~G~~C~~-------------------------C~~g~~g~~~~------~c~~---C~C~~~g~~~~~ 181 (204)
.|.|+ +||+|..|+. |.+||+|..+. .|.. ..|.+. +.
T Consensus 505 ~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~----G~ 580 (690)
T 3fcs_B 505 QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGR----GK 580 (690)
T ss_dssp SEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSS----CE
T ss_pred eeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCC----CE
Confidence 99999 9999999961 66788887664 2322 224432 25
Q ss_pred CCCCCcccC-CCCCCcccCCc
Q psy15475 182 CDPSGQCPG-VFMNRAEMSSD 201 (204)
Q Consensus 182 C~~~g~C~c-~~~~~g~~~~~ 201 (204)
|. .++|.| .+||+|..|++
T Consensus 581 C~-~g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 581 CE-CGSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp EE-TTEEECCSTTCBSTTSCB
T ss_pred Ee-CCEEECCCCCccCCCcCc
Confidence 54 478999 89999999876
No 24
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.76 E-value=2.2e-09 Score=96.63 Aligned_cols=110 Identities=26% Similarity=0.602 Sum_probs=71.7
Q ss_pred CCC------CCCCCCCCCCCCCCCcC---CCCCC--CCccCCCCCCCcccCCCceeecCCCCccCCCcccCCCccccCCC
Q psy15475 48 TCL------PGYFGDALALPKGDCEP---CQCYI--PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG 116 (204)
Q Consensus 48 ~C~------~g~~g~~c~~~~~~C~~---c~C~~--~g~~~~~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~ 116 (204)
.|. +||+|..|+.+...|.. .+|.+ +|. |. .+.|.|.+||+|.+|+ |+...
T Consensus 496 ~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~---------C~--~g~C~C~~G~~G~~Ce-c~~~~------ 557 (687)
T 3k6s_B 496 LCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGL---------CF--CGKCRCHPGFEGSACQ-CERTT------ 557 (687)
T ss_dssp EECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEE---------EE--TTEEEECTTCCSTTSC-SCCSS------
T ss_pred EcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCe---------EE--CCEEEcCCCCcCCCCc-cCCCC------
Confidence 677 88888888744445653 23666 666 76 4799999999999998 33211
Q ss_pred CCCcc---CCCCCCCCCCCcccCCCCeeecCCCCccCCCCCCCCCcccCCCC---CCccccCCCCCCCCCCCC
Q psy15475 117 EGCKS---CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCD 183 (204)
Q Consensus 117 ~~C~~---c~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~g~~~~---~c~~C~C~~~g~~~~~C~ 183 (204)
..|.. ..|. .+++|.. ++|.|++||+|..|+.|+. -. .++. .|..|.+...|.....|+
T Consensus 558 ~~C~~~~g~~Cs----~~G~C~~--g~C~C~~Gy~G~~Ce~c~~-C~-~~C~~~g~Cv~C~~~~~G~~~~~C~ 622 (687)
T 3k6s_B 558 EGCLNPRRVECS----GRGRCRC--NVCECHSGYQLPLCQECPG-CP-SPCGKYISCAECLKFEKGPFGKNCS 622 (687)
T ss_dssp CTTBCTTCSBTS----SSCCBCS--SCBCCSTTCCTTTTCCCTT-SC-CCCTTTHHHHTTTTSCSCCCSSCSS
T ss_pred CCCCCCCCCCCC----CCCcCCC--CEEECCCCCcCCCCCCCCC-CC-cccCCCCCCCcccCCCCCCCCcccc
Confidence 23332 2354 4567864 8899999999999998541 00 1221 366777777666555554
No 25
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.44 E-value=8.2e-08 Score=75.03 Aligned_cols=104 Identities=26% Similarity=0.561 Sum_probs=63.1
Q ss_pred CCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCc----CCCCCCCCccCCCCCCCcccCCCceeecCC
Q psy15475 21 SDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCE----PCQCYIPGTLETETFTPVCDQLTGQCSCKP 96 (204)
Q Consensus 21 ~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~----~c~C~~~g~~~~~~~~~~C~~~~g~C~C~~ 96 (204)
|..++.|. .+.|. |.++|.|..|+ |+.+.+..... ...|. ..+|.++|+ |. .+.|.|.+
T Consensus 98 Csg~G~C~--~g~C~-C~~G~~G~~Ce-c~~~~~~~~~~--~~~C~~~~~~~~Csg~G~---------C~--~g~C~C~~ 160 (217)
T 2p28_B 98 CHGKGFLE--CGICR-CDTGYIGKNCE-CQTQGRSSQEL--EGSCRKDNNSIICSGLGD---------CV--CGQCLCHT 160 (217)
T ss_dssp TTTSEEEE--TTEEE-ECTTEESTTSC-EECCCCC-GGG--GGGGBSSTTSCBGGGTEE---------EE--TTEEEECC
T ss_pred cCCCceEE--CCEEE-CCCCccCCccc-ccCcccccccC--CCcCCCCCCCCCCCCCCE---------Ee--CCceECCC
Confidence 44555664 37785 89999999885 55443321100 01233 345777776 86 47899999
Q ss_pred CC------ccCCCcccCCCccccCCCCCCccC---CCCCCCCCCCcccCCCCeeecCCCCccCCCCC
Q psy15475 97 HV------VGTNCDQCEVGHYNIISGEGCKSC---DCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 97 g~------~G~~C~~C~~G~~g~~~~~~C~~c---~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~ 154 (204)
+| .|.+|+.= ...|... .|... .+++|. .++|.|.+||+|..|+.
T Consensus 161 gw~~~~~~~G~~Ce~~---------~~~C~~~~g~~C~~~--~~G~C~--~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 161 SDVPGKLIYGQYCECD---------TINCERYNGQVCGGP--GRGLCF--CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp CCSTTCCEESTTSCEE---------SSCSCEETTEETTCT--TTEEEE--TTEEEECTTEESTTSCE
T ss_pred CCCCcccEECCCcccC---------CccCCCCCCCCCCCC--CCcEEe--CCeeECCCCCccCCcCC
Confidence 95 78888630 1123211 24321 127787 47999999999999863
No 26
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.28 E-value=6.2e-10 Score=89.19 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=23.5
Q ss_pred ccccCCCCCCCCCCCC---CCCcccCCCCCCcccCCccc
Q psy15475 168 KPCMCDPIGSNSLQCD---PSGQCPGVFMNRAEMSSDDV 203 (204)
Q Consensus 168 ~~C~C~~~g~~~~~C~---~~g~C~c~~~~~g~~~~~~~ 203 (204)
..-+|.+.+ +|. .+.+|.|++||+|.+|+.+|
T Consensus 170 ~~~~c~ngg----~C~dg~~~y~C~Cp~Gf~G~~c~~~i 204 (267)
T 4fbr_A 170 VDAKSNDGG----KTLSGTMTYNGEGPIGFRGTLTSPDT 204 (267)
T ss_dssp EEEECSSTT----SEEEEEEEETTSCCEEEEEEEEETTE
T ss_pred CCCCCCCCC----EeeCCCCCeEEeCCCCcccccccccc
Confidence 334455543 676 47889999999999998875
No 27
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.27 E-value=5.5e-07 Score=60.69 Aligned_cols=80 Identities=20% Similarity=0.370 Sum_probs=50.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcCCCCCCCCccCCCCCCCcccCCCceeecCCCCccCCCcccCCCccccCCCCCCccCCC
Q psy15475 45 QCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC 124 (204)
Q Consensus 45 ~C~~C~~g~~g~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C 124 (204)
.| .|.+||.|..++ +++|...+|.+.. ....|.|+++|+ +|+. . ..+.|...+|
T Consensus 3 ~C-~C~~g~~g~~c~--~~~c~~~pC~n~~-------------~~y~C~C~~G~~--~C~~--~------~~~~C~~~pC 56 (91)
T 1tpg_A 3 QV-ICRDEKTQMIYQ--QHQSWLRPVLRSN-------------RVEYCWCNSGRA--QCHS--V------PVKSCSEPRC 56 (91)
T ss_dssp CC-CCBCSSSCCBCC--SSCEEEEECSSSS-------------CEEEEECSSSCC--BCCE--E------CEEECSSCCS
T ss_pred ee-ECCCCCcCCeEC--CCcccCCccccCC-------------CCcEeECCCCCc--cccc--C------cCCcccCCCC
Confidence 45 566677666554 2456555554332 145899999997 5651 0 0234655556
Q ss_pred CCCCCCCCcccC----CCCeeecCCCCccCCCCC
Q psy15475 125 DPVGSLNRTCDP----ITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 125 ~~~g~~~~~C~~----~~g~C~C~~g~~G~~C~~ 154 (204)
. ++++|.. ....|.|++||+|.+|++
T Consensus 57 ~----ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 57 F----NGGTCQQALYFSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp C----TTCEEEEESSSSCEEEECCTTCBSSSCCB
T ss_pred C----CCCEeecCCCCCCeEeECCCCCcCCcCCc
Confidence 5 4567764 245799999999999974
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.25 E-value=4.3e-07 Score=61.23 Aligned_cols=78 Identities=18% Similarity=0.373 Sum_probs=56.6
Q ss_pred ccccCCCCCCCCCccCCCCccc--cCCCCcCCCCCCCCCCCCCCCCCC-CCCCCCcCCCCCCCCccCCCCCCCcccC---
Q psy15475 14 LLCVGPPSDILKSVAGTTGDCL--KCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQ--- 87 (204)
Q Consensus 14 ~~c~~~~~~~~~~C~~~~g~C~--~C~~~~~G~~C~~C~~g~~g~~c~-~~~~~C~~c~C~~~g~~~~~~~~~~C~~--- 87 (204)
+.|.|.+.+.+..|+. ..|. .|..+..++.| .|++||. .|+ .+++.|.+.+|.++++ |..
T Consensus 2 y~C~C~~g~~g~~c~~--~~c~~~pC~n~~~~y~C-~C~~G~~--~C~~~~~~~C~~~pC~ngg~---------C~~~~~ 67 (91)
T 1tpg_A 2 YQVICRDEKTQMIYQQ--HQSWLRPVLRSNRVEYC-WCNSGRA--QCHSVPVKSCSEPRCFNGGT---------CQQALY 67 (91)
T ss_dssp CCCCCBCSSSCCBCCS--SCEEEEECSSSSCEEEE-ECSSSCC--BCCEECEEECSSCCSCTTCE---------EEEESS
T ss_pred eeeECCCCCcCCeECC--CcccCCccccCCCCcEe-ECCCCCc--ccccCcCCcccCCCCCCCCE---------eecCCC
Confidence 3577777787777743 3332 35555566677 7888887 676 4566798889999888 864
Q ss_pred -CCceeecCCCCccCCCcc
Q psy15475 88 -LTGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 88 -~~g~C~C~~g~~G~~C~~ 105 (204)
....|.|++||.|.+|++
T Consensus 68 ~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 68 FSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp SSCEEEECCTTCBSSSCCB
T ss_pred CCCeEeECCCCCcCCcCCc
Confidence 245899999999999974
No 29
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.21 E-value=2.5e-07 Score=72.29 Aligned_cols=96 Identities=25% Similarity=0.541 Sum_probs=60.6
Q ss_pred CceeecCCCCccCCCcccCCCccccC-CCCCCc----cCCCCCCCCCCCcccCCCCeeecCCC------CccCCCCC---
Q psy15475 89 TGQCSCKPHVVGTNCDQCEVGHYNII-SGEGCK----SCDCDPVGSLNRTCDPITGQCLCRPG------VTGTRCEL--- 154 (204)
Q Consensus 89 ~g~C~C~~g~~G~~C~~C~~G~~g~~-~~~~C~----~c~C~~~g~~~~~C~~~~g~C~C~~g------~~G~~C~~--- 154 (204)
.+.|.|.+||.|.+|+ |+.+.+... ....|. ...|. .+++|. .++|.|.+| |+|..|+.
T Consensus 106 ~g~C~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs----g~G~C~--~g~C~C~~gw~~~~~~~G~~Ce~~~~ 178 (217)
T 2p28_B 106 CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICS----GLGDCV--CGQCLCHTSDVPGKLIYGQYCECDTI 178 (217)
T ss_dssp TTEEEECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGG----GTEEEE--TTEEEECCCCSTTCCEESTTSCEESS
T ss_pred CCEEECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCC----CCCEEe--CCceECCCCCCCcccEECCCcccCCc
Confidence 3789999999999998 554332110 011233 12233 467887 478999999 58888862
Q ss_pred -CCCCcccCCCCCCccccCCCCCCCCCCCCCCCcccCCCCCCcccCCccc
Q psy15475 155 -CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSDDV 203 (204)
Q Consensus 155 -C~~g~~g~~~~~c~~C~C~~~g~~~~~C~~~g~C~c~~~~~g~~~~~~~ 203 (204)
|+.. . .-.|.+. ..+.|. .|+|.|.+||+|..|+.+.
T Consensus 179 ~C~~~-~--------g~~C~~~--~~G~C~-~g~C~C~~G~~G~~C~~~~ 216 (217)
T 2p28_B 179 NCERY-N--------GQVCGGP--GRGLCF-CGKCRCHPGFEGSACQHHH 216 (217)
T ss_dssp CSCEE-T--------TEETTCT--TTEEEE-TTEEEECTTEESTTSCEEC
T ss_pred cCCCC-C--------CCCCCCC--CCcEEe-CCeeECCCCCccCCcCCCC
Confidence 3321 0 0134432 013677 5899999999999998753
No 30
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.20 E-value=8.7e-09 Score=78.62 Aligned_cols=106 Identities=17% Similarity=0.349 Sum_probs=63.9
Q ss_pred CCCc----CCCCCCCCccCCCCCCCcccCC-------CceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCC
Q psy15475 63 GDCE----PCQCYIPGTLETETFTPVCDQL-------TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLN 131 (204)
Q Consensus 63 ~~C~----~c~C~~~g~~~~~~~~~~C~~~-------~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~ 131 (204)
++|. ..+|.++++ |... ..+|.|++||.|..++ |. .+.|...+|. ++
T Consensus 45 d~C~~~~~~~~C~~~~~---------C~~~~~~~~~g~y~C~C~~G~~g~~~~-C~--------~d~C~~~~C~----~~ 102 (186)
T 1z1y_A 45 NECXXETLGXACGEFGQ---------CIENPDPAQVNMYXCGCIEGYTLXEDT-CV--------LDVCQYXNCG----ES 102 (186)
T ss_dssp CCCSGGGTTSEEETTEE---------EEECSSTTSSCSEEEEECTTEEEETTE-EE--------EGGGTTCCCC----TT
T ss_pred CcccCCCCCCCCCCCCE---------eecCCCCcCCCCEECCCCCCCccCCCC-CC--------CCcCcCCCCC----CC
Confidence 4566 556777666 7543 3479999999987652 22 1244444455 34
Q ss_pred Cccc----CC--CCeeecCCCCcc-----CCCCCCCCCcccCCCCCCccccC-CCCCCCCCCCC---CCCcccCCCCCCc
Q psy15475 132 RTCD----PI--TGQCLCRPGVTG-----TRCELCQPNHYGFSLDGCKPCMC-DPIGSNSLQCD---PSGQCPGVFMNRA 196 (204)
Q Consensus 132 ~~C~----~~--~g~C~C~~g~~G-----~~C~~C~~g~~g~~~~~c~~C~C-~~~g~~~~~C~---~~g~C~c~~~~~g 196 (204)
++|. .. .+.|.|++||+| ..|+.- +.+.|.. +| .+ ++.|. .+.+|.|.+||+|
T Consensus 103 g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~-------~~~~C~~-~C~~~----~~~C~n~~g~y~C~C~~G~~g 170 (186)
T 1z1y_A 103 GECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT-------GETACQL-XCNTD----NEVCXNVEGVYXCQCMEGFTF 170 (186)
T ss_dssp EEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE-------ECCCCCC-CCCTT----TEEEEEETTEEEEEECTTCEE
T ss_pred CEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc-------CCCcccc-ccccc----CcceecCCCCeeeECCCCCcc
Confidence 6675 33 347999999998 445320 0012221 34 22 23566 2458999999999
Q ss_pred ccCCcc
Q psy15475 197 EMSSDD 202 (204)
Q Consensus 197 ~~~~~~ 202 (204)
..++..
T Consensus 171 ~~~~~~ 176 (186)
T 1z1y_A 171 DXEXNV 176 (186)
T ss_dssp ETTTTE
T ss_pred Cccccc
Confidence 987654
No 31
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.13 E-value=5.4e-08 Score=74.18 Aligned_cols=91 Identities=24% Similarity=0.500 Sum_probs=57.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCccCCCCCCCccc----CC--CceeecCCCCcc-----CCCcccCCCcc
Q psy15475 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD----QL--TGQCSCKPHVVG-----TNCDQCEVGHY 111 (204)
Q Consensus 43 G~~C~~C~~g~~g~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~----~~--~g~C~C~~g~~G-----~~C~~C~~G~~ 111 (204)
++.| .|++||.|..+.-.+++|...+|.++++ |. .. ..+|.|++||.| ..|+.-.
T Consensus 73 ~y~C-~C~~G~~g~~~~C~~d~C~~~~C~~~g~---------C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~---- 138 (186)
T 1z1y_A 73 MYXC-GCIEGYTLXEDTCVLDVCQYXNCGESGE---------CIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTG---- 138 (186)
T ss_dssp SEEE-EECTTEEEETTEEEEGGGTTCCCCTTEE---------EEEEEETTEEEEEEEECTEEEEETTTTTEEEEEE----
T ss_pred CEEC-CCCCCCccCCCCCCCCcCcCCCCCCCCE---------EeeCCcCCCCCceEECCCCCcccCCCCCcceEcC----
Confidence 4566 6777877764431235677778887777 76 43 348999999988 5554310
Q ss_pred ccCCCCCCccCCCCCCCCCCCcccCCCC--eeecCCCCccCCCCCC
Q psy15475 112 NIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELC 155 (204)
Q Consensus 112 g~~~~~~C~~c~C~~~g~~~~~C~~~~g--~C~C~~g~~G~~C~~C 155 (204)
...|.. +|+ ..+++|....+ +|.|++||+|..+++-
T Consensus 139 ----~~~C~~-~C~---~~~~~C~n~~g~y~C~C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 139 ----ETACQL-XCN---TDNEVCXNVEGVYXCQCMEGFTFDXEXNV 176 (186)
T ss_dssp ----CCCCCC-CCC---TTTEEEEEETTEEEEEECTTCEEETTTTE
T ss_pred ----CCcccc-ccc---ccCcceecCCCCeeeECCCCCccCccccc
Confidence 123432 341 13566765443 7999999999888653
No 32
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.05 E-value=3.7e-06 Score=75.10 Aligned_cols=110 Identities=24% Similarity=0.520 Sum_probs=67.6
Q ss_pred ecccccCCCCCCCCCccCCC-C--cc-ccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcCCC--CCCCC---ccCCCCCC
Q psy15475 12 DILLCVGPPSDILKSVAGTT-G--DC-LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ--CYIPG---TLETETFT 82 (204)
Q Consensus 12 ~~~~c~~~~~~~~~~C~~~~-g--~C-~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~c~--C~~~g---~~~~~~~~ 82 (204)
+|..|...||.+++.|.... + .| . |+++|+|. +..|+ .+++|...+ |.+++ +
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~-C~~GytGd----------g~~Ce-DiDEC~~~p~~C~~gg~~~~------- 62 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGF-CPVGFLGN----------GTHCE-DLDECALVPDICFSTSKVPR------- 62 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECC-CCTTBCSC----------SSSCC-BCCTTTTSCCCSCCCSSSCC-------
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCc-CCCccCCC----------CCCcc-ccccccCCCCcccCCccccc-------
Confidence 56678778888888886543 2 36 4 55555541 03343 345677666 87766 5
Q ss_pred CcccCC--Cceee-cCCCCccCCCcc------------cCCCccccCCCCCCcc--CCCCCCCCCCCcccCC------CC
Q psy15475 83 PVCDQL--TGQCS-CKPHVVGTNCDQ------------CEVGHYNIISGEGCKS--CDCDPVGSLNRTCDPI------TG 139 (204)
Q Consensus 83 ~~C~~~--~g~C~-C~~g~~G~~C~~------------C~~G~~g~~~~~~C~~--c~C~~~g~~~~~C~~~------~g 139 (204)
|... .++|. |++||.|..|+. |.. ...|.. .+|. .+++|... .+
T Consensus 63 --CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d-------ideC~~~~~pC~----~~~~Cvnt~~~~~GsY 129 (634)
T 1yo8_A 63 --CVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP-------ENPCKDKTHNCH----KHAECIYLGHFSDPMY 129 (634)
T ss_dssp --EEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEE-------CCTTTTTCCCCC----TTEEEEECCTTCSSSE
T ss_pred --eeeccCceecccCCCCcccCccccccccccccCCCcccc-------cccccCCCcccc----cCccccccccccccce
Confidence 7543 45898 999999988761 211 234432 2344 34567543 34
Q ss_pred eeecCCCCcc--CCCC
Q psy15475 140 QCLCRPGVTG--TRCE 153 (204)
Q Consensus 140 ~C~C~~g~~G--~~C~ 153 (204)
+|.|++||+| .+|+
T Consensus 130 ~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 130 KCECQTGYAGDGLICG 145 (634)
T ss_dssp EEEECTTEEESSSSEE
T ss_pred eeeccCCccccCcccc
Confidence 7999999998 7775
No 33
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.97 E-value=3e-09 Score=85.21 Aligned_cols=156 Identities=12% Similarity=-0.122 Sum_probs=94.8
Q ss_pred CCCCCCCccCCC--CccccCCCCcCCCCCCC---------------CCCC---CCCCCCCCCCCCCcCCCCCCCCccCCC
Q psy15475 20 PSDILKSVAGTT--GDCLKCIYNTGGPQCDT---------------CLPG---YFGDALALPKGDCEPCQCYIPGTLETE 79 (204)
Q Consensus 20 ~~~~~~~C~~~~--g~C~~C~~~~~G~~C~~---------------C~~g---~~g~~c~~~~~~C~~c~C~~~g~~~~~ 79 (204)
++.++++|.... ..|. |+.+|+|.+|+. |.+| |.|..++..+ +|.+.||.+.++
T Consensus 39 ~c~ngG~C~~g~~~y~C~-Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~-eC~s~pC~ngG~---- 112 (267)
T 4fbr_A 39 KSDDGGKTLKGTMTYNGE-GPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNI-VAVSIKSNDGGK---- 112 (267)
T ss_dssp ECSSTTSEEEEEEEETTS-CCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCE-EEEEEECSSTTS----
T ss_pred CcCCCCeecCCCCCeEEe-CCCCcccccccccccccccccCcCCCcccCCCeeeccCcccccc-ccCCCCCCCCCE----
Confidence 667888886643 3485 888888888863 2222 3466665443 588888888887
Q ss_pred CCCCcccCC--CceeecCCCCccCCCcc---------------cCCCcc---ccCCCC--CCccCCCCCCCCCCCcccCC
Q psy15475 80 TFTPVCDQL--TGQCSCKPHVVGTNCDQ---------------CEVGHY---NIISGE--GCKSCDCDPVGSLNRTCDPI 137 (204)
Q Consensus 80 ~~~~~C~~~--~g~C~C~~g~~G~~C~~---------------C~~G~~---g~~~~~--~C~~c~C~~~g~~~~~C~~~ 137 (204)
|... +++|.|+++|+|.+|+. |.++.. |.+... .+...+|. ++++|...
T Consensus 113 -----C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~----ngg~C~dg 183 (267)
T 4fbr_A 113 -----TLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSN----DGGKTLSG 183 (267)
T ss_dssp -----EEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECS----STTSEEEE
T ss_pred -----EecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCC----CCCEeeCC
Confidence 7543 46899999999999983 222211 111111 11122233 45667542
Q ss_pred --CCeeecCCCCccCCCCC-------------------------CCCCcccCCCCCCccccCCCCCCCCCCCC---CCCc
Q psy15475 138 --TGQCLCRPGVTGTRCEL-------------------------CQPNHYGFSLDGCKPCMCDPIGSNSLQCD---PSGQ 187 (204)
Q Consensus 138 --~g~C~C~~g~~G~~C~~-------------------------C~~g~~g~~~~~c~~C~C~~~g~~~~~C~---~~g~ 187 (204)
++.|.|++||+|.+|+. |.+++-... ...+|.+. .+|. .+..
T Consensus 184 ~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~----c~~~c~ng----GtC~dg~~sy~ 255 (267)
T 4fbr_A 184 TMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVA----LNVASSDG----GKTLAGTMIYN 255 (267)
T ss_dssp EEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEE----EEEECSST----TSEEEEEEEET
T ss_pred CCCeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCcccc----CCcCCCCC----CEeeCCCccee
Confidence 34699999999999874 222211110 12345543 3666 4789
Q ss_pred ccCCCCCCccc
Q psy15475 188 CPGVFMNRAEM 198 (204)
Q Consensus 188 C~c~~~~~g~~ 198 (204)
|.|++||+|.+
T Consensus 256 CeCp~GF~G~~ 266 (267)
T 4fbr_A 256 GEGPIGFRARL 266 (267)
T ss_dssp TSCCEEEEEEE
T ss_pred ecCCCCccccC
Confidence 99999999863
No 34
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.90 E-value=4.9e-06 Score=60.48 Aligned_cols=116 Identities=17% Similarity=0.267 Sum_probs=62.7
Q ss_pred CCCCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcCC---CCCCCCccCCCCCCCcccCC--Cceee
Q psy15475 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC---QCYIPGTLETETFTPVCDQL--TGQCS 93 (204)
Q Consensus 19 ~~~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~c---~C~~~g~~~~~~~~~~C~~~--~g~C~ 93 (204)
++|.++++|.. +..|. |+++|.|.. +. ....+..|+ ++++|... +|.++++ |.+. ...|.
T Consensus 7 ~~C~~~~~C~~-~~~C~-C~~G~~g~~-~~--~~~~~~~C~-dideC~~~~~~~C~~~~~---------C~n~~g~y~C~ 71 (143)
T 2bou_A 7 RWCPQDSSCVN-ATACR-CNPGFSSFS-EI--ITTPMETCD-DINECATLSKVSCGKFSD---------CWNTEGSYDCV 71 (143)
T ss_dssp TTCCTTEEESS-SSCEE-ECTTEECSS-SS--BCSTTCCCE-ECCGGGC----CCCTTEE---------EEECSSCEEEE
T ss_pred CcCCCCCEEcC-CCEEe-CCCCCcCcc-cc--ccCCCCcCC-ccccccCCCCCCCCCCCE---------EEcCCCCeEeE
Confidence 45666777744 35674 777776642 00 001123342 34567653 6776666 7654 45899
Q ss_pred cCCCCccCCCcccCCCccccC--CCCCCcc--CCCCCCCCCCCcccCCCC--eeecCCCCccCCCC
Q psy15475 94 CKPHVVGTNCDQCEVGHYNII--SGEGCKS--CDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCE 153 (204)
Q Consensus 94 C~~g~~G~~C~~C~~G~~g~~--~~~~C~~--c~C~~~g~~~~~C~~~~g--~C~C~~g~~G~~C~ 153 (204)
|++||.|..++.-.....+.. ..++|.. .+|. .+++|....+ .|.|++||+|....
T Consensus 72 C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~----~~~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 72 CSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCD----SSTVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp ECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCC----TTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred CCCCcccCcCccccccCCCCCcCCccCccCcCCCCC----CCCEEECCCCCEEeeCCCCcccCCCC
Confidence 999999986642100011100 1233432 3444 3456765443 69999999987763
No 35
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.82 E-value=3.1e-06 Score=73.31 Aligned_cols=76 Identities=29% Similarity=0.743 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCccCCCCCCCcccCCCceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCC
Q psy15475 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127 (204)
Q Consensus 48 ~C~~g~~g~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~~~~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~ 127 (204)
.|.++|++..|+. ..|.. +|.+ ++ |.. .+.|.|.++|+|.+|++ ..|.. +|.
T Consensus 380 ~C~~~~~g~~c~~--~~C~~-~C~n-G~---------C~~-~~~C~C~~G~~G~~C~~-----------~~C~~-~C~-- 431 (463)
T 2wg3_C 380 ECRATVQPAQTLT--SECSR-LCRN-GY---------CTP-TGKCCCSPGWEGDFCRT-----------AKCEP-ACR-- 431 (463)
T ss_dssp GGCCCCCCCCCCC--CHHHH-HCCS-EE---------ECT-TSCEEECTTEESTTSCE-----------ECC--------
T ss_pred cCCCCCcCCCCcc--ccccC-CCCC-Cc---------cCC-CCeECCCCCcCCCcCCc-----------CcCCC-CCC--
Confidence 5677777776653 24654 5775 66 875 56899999999999964 13433 454
Q ss_pred CCCCCcccCCCCeeecCCCCccCCCCC
Q psy15475 128 GSLNRTCDPITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 128 g~~~~~C~~~~g~C~C~~g~~G~~C~~ 154 (204)
++++|.. .+.|.|++||+|.+|+.
T Consensus 432 --~~g~C~~-~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 432 --HGGVCVR-PNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp ---------------------------
T ss_pred --CCCEECC-CCEEECCCCcccCCCCC
Confidence 4567875 47899999999999974
No 36
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.78 E-value=1.5e-05 Score=57.86 Aligned_cols=105 Identities=22% Similarity=0.420 Sum_probs=62.1
Q ss_pred CCCCCCccCCCCCCCcccCCCceeecCCCCccC---------CCcccCCCccccCCCCCCccC---CCCCCCCCCCcccC
Q psy15475 69 QCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT---------NCDQCEVGHYNIISGEGCKSC---DCDPVGSLNRTCDP 136 (204)
Q Consensus 69 ~C~~~g~~~~~~~~~~C~~~~g~C~C~~g~~G~---------~C~~C~~G~~g~~~~~~C~~c---~C~~~g~~~~~C~~ 136 (204)
+|.++++ |.+ .+.|.|++||+|. .|+. .+.|... +|. .+++|..
T Consensus 8 ~C~~~~~---------C~~-~~~C~C~~G~~g~~~~~~~~~~~C~d----------ideC~~~~~~~C~----~~~~C~n 63 (143)
T 2bou_A 8 WCPQDSS---------CVN-ATACRCNPGFSSFSEIITTPMETCDD----------INECATLSKVSCG----KFSDCWN 63 (143)
T ss_dssp TCCTTEE---------ESS-SSCEEECTTEECSSSSBCSTTCCCEE----------CCGGGC----CCC----TTEEEEE
T ss_pred cCCCCCE---------EcC-CCEEeCCCCCcCccccccCCCCcCCc----------cccccCCCCCCCC----CCCEEEc
Confidence 5777776 876 4789999999984 3321 2344322 344 3456754
Q ss_pred CC--CeeecCCCCccCCCCCCCCCcccCC---CCCCcc--ccCCCCCCCCCCCC---CCCcccCCCCCCcccCCc
Q psy15475 137 IT--GQCLCRPGVTGTRCELCQPNHYGFS---LDGCKP--CMCDPIGSNSLQCD---PSGQCPGVFMNRAEMSSD 201 (204)
Q Consensus 137 ~~--g~C~C~~g~~G~~C~~C~~g~~g~~---~~~c~~--C~C~~~g~~~~~C~---~~g~C~c~~~~~g~~~~~ 201 (204)
.. +.|.|++||+|..+++-.....+.. .+.|.. -.|.+ ++.|. .+.+|.|.+||+|....+
T Consensus 64 ~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~----~~~C~n~~g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 64 TEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDS----STVCFNTVGSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp CSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCT----TSEEEECSSCEEEECCSSSCBCTTCC
T ss_pred CCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCC----CCEEECCCCCEEeeCCCCcccCCCCc
Confidence 33 4799999999987653111111111 223332 33443 23676 245899999999987543
No 37
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.75 E-value=8.9e-06 Score=72.67 Aligned_cols=107 Identities=22% Similarity=0.565 Sum_probs=66.5
Q ss_pred CCCCcCCCCCCCCccCCCCCCCcccCCC---cee-ecCCCCcc--CCCcccCCCccccCCCCCCccCC--CCCCCCCCC-
Q psy15475 62 KGDCEPCQCYIPGTLETETFTPVCDQLT---GQC-SCKPHVVG--TNCDQCEVGHYNIISGEGCKSCD--CDPVGSLNR- 132 (204)
Q Consensus 62 ~~~C~~c~C~~~g~~~~~~~~~~C~~~~---g~C-~C~~g~~G--~~C~~C~~G~~g~~~~~~C~~c~--C~~~g~~~~- 132 (204)
+++|...+|.++++ |.... .+| .|++||+| .+|+. ..+|...+ |.+ ++
T Consensus 3 IDeC~~nPC~~gg~---------C~n~~~Gsy~C~~C~~GytGdg~~CeD----------iDEC~~~p~~C~~----gg~ 59 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQ---------CSSFPDGSWSCGFCPVGFLGNGTHCED----------LDECALVPDICFS----TSK 59 (634)
T ss_dssp -CGGGGCCSCTTCC---------EEECTTSCEEECCCCTTBCSCSSSCCB----------CCTTTTSCCCSCC----CSS
T ss_pred ccccCCCCCCCCCE---------EecCCCCCeECCcCCCccCCCCCCccc----------cccccCCCCcccC----Ccc
Confidence 45688888988777 86543 579 89999988 67752 34555433 553 33
Q ss_pred --cccCC--CCeee-cCCCCccCCCC------------CCCCCcccCCCCCCcc--ccCCCCCCCCCCCC-------CCC
Q psy15475 133 --TCDPI--TGQCL-CRPGVTGTRCE------------LCQPNHYGFSLDGCKP--CMCDPIGSNSLQCD-------PSG 186 (204)
Q Consensus 133 --~C~~~--~g~C~-C~~g~~G~~C~------------~C~~g~~g~~~~~c~~--C~C~~~g~~~~~C~-------~~g 186 (204)
+|... .++|. |++||+|..|+ .|.+ ...|.. -.|.+ ++.|. .+.
T Consensus 60 ~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d------ideC~~~~~pC~~----~~~Cvnt~~~~~GsY 129 (634)
T 1yo8_A 60 VPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP------ENPCKDKTHNCHK----HAECIYLGHFSDPMY 129 (634)
T ss_dssp SCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEE------CCTTTTTCCCCCT----TEEEEECCTTCSSSE
T ss_pred ccceeeccCceecccCCCCcccCccccccccccccCCCcccc------cccccCCCccccc----Cccccccccccccce
Confidence 56543 34798 99999998875 1221 122321 13332 22454 245
Q ss_pred cccCCCCCCc--ccCCc
Q psy15475 187 QCPGVFMNRA--EMSSD 201 (204)
Q Consensus 187 ~C~c~~~~~g--~~~~~ 201 (204)
+|.|..||+| .+|++
T Consensus 130 ~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 130 KCECQTGYAGDGLICGE 146 (634)
T ss_dssp EEEECTTEEESSSSEEE
T ss_pred eeeccCCccccCccccc
Confidence 8999999998 77875
No 38
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.68 E-value=1.7e-05 Score=48.14 Aligned_cols=41 Identities=20% Similarity=0.413 Sum_probs=32.3
Q ss_pred CCCCCCCCCCcCCCCCCCCccCCCCCCCccc-----C--CCceeecCCCCccCCCcc
Q psy15475 56 DALALPKGDCEPCQCYIPGTLETETFTPVCD-----Q--LTGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 56 ~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~-----~--~~g~C~C~~g~~G~~C~~ 105 (204)
..+.+++++|.+.||.++|+ |. + ....|.|+++|+|.+||.
T Consensus 2 ~~c~~~~~eC~s~pC~NgGt---------C~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 2 TSHLVKCAEKEKTFCVNGGE---------CFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp -CCEEECCSTTTTTSCTTCE---------EEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCcccCCCCcCCCCCCCCC---------cCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 45556677899999999999 83 1 245899999999999985
No 39
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.49 E-value=1.5e-05 Score=69.04 Aligned_cols=55 Identities=29% Similarity=0.636 Sum_probs=19.2
Q ss_pred CcccCCCCeeecCCCCccCCCCCCCCCcccCCCCCCccccCCCCCCCCCCCCCCCcccCCCCCCcccCCcc
Q psy15475 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSDD 202 (204)
Q Consensus 132 ~~C~~~~g~C~C~~g~~G~~C~~C~~g~~g~~~~~c~~C~C~~~g~~~~~C~~~g~C~c~~~~~g~~~~~~ 202 (204)
++|.. .+.|.|++||+|..|+. ..|.+ +|.+.+ +|....+|.|..+|+|..|+.+
T Consensus 402 G~C~~-~~~C~C~~G~~G~~C~~----------~~C~~-~C~~~g----~C~~~~~C~C~~G~~G~~C~~~ 456 (463)
T 2wg3_C 402 GYCTP-TGKCCCSPGWEGDFCRT----------AKCEP-ACRHGG----VCVRPNKCLCKKGYLGPQCEQV 456 (463)
T ss_dssp EEECT-TSCEEECTTEESTTSCE----------ECC-----------------------------------
T ss_pred CccCC-CCeECCCCCcCCCcCCc----------CcCCC-CCCCCC----EECCCCEEECCCCcccCCCCCC
Confidence 67875 57899999999999963 13444 666644 7886689999999999999875
No 40
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.40 E-value=6.1e-05 Score=54.68 Aligned_cols=74 Identities=24% Similarity=0.622 Sum_probs=46.8
Q ss_pred CCCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccCC-
Q psy15475 61 PKGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI- 137 (204)
Q Consensus 61 ~~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~~- 137 (204)
+++.|.+.+|.++++ |.+. ...|.|++||+|.+|+.= ...|..+.+.+.+ ...+|...
T Consensus 46 did~C~~~pC~n~g~---------C~~~~g~y~C~C~~G~~G~~C~~~---------~~~c~~c~~~~~~-C~~~C~~~~ 106 (142)
T 2c4f_L 46 DGDQCASSPCQNGGS---------CKDQLQSYICFCLPAFEGRNCETH---------KDDQLICVNENGG-CEQYCSDHT 106 (142)
T ss_dssp TCCGGGGCCCCTTCE---------EEEETTEEEEECCTTEESTTSCEE---------GGGCCSTTTGGGG-CSSEEECCT
T ss_pred ccCcCcCCCcCCCCE---------EeCCCCCEEeeCCCCccCCccccC---------ccccccccCCCCC-ccCEeECCC
Confidence 446788889998887 8654 348999999999998740 0122223332211 11255443
Q ss_pred --CCeeecCCCCc----cCCCC
Q psy15475 138 --TGQCLCRPGVT----GTRCE 153 (204)
Q Consensus 138 --~g~C~C~~g~~----G~~C~ 153 (204)
.+.|.|++||+ |.+|+
T Consensus 107 g~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 107 GTKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp TSCCEEECCTTEEECTTSSCEE
T ss_pred CCCEEEECCCCceECCCCCCCC
Confidence 34799999998 66664
No 41
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.36 E-value=0.00011 Score=53.61 Aligned_cols=68 Identities=26% Similarity=0.683 Sum_probs=43.8
Q ss_pred CCCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCcccCCCccccCCCCCCcc--CCCCCCCCCCCcc-c
Q psy15475 61 PKGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS--CDCDPVGSLNRTC-D 135 (204)
Q Consensus 61 ~~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~--c~C~~~g~~~~~C-~ 135 (204)
+++.|.+.+|.++++ |.+. ...|.|++||+|.+|+. .+.|.. ..|. .+| .
T Consensus 47 dideC~~~pC~n~g~---------C~~~~~~y~C~C~~G~~G~~C~~----------~deC~~~~~~C~------~~C~~ 101 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGL---------CKDDINSYECWCQVGFEGKNCEL----------DATCNIKNGRCK------QFCKT 101 (146)
T ss_dssp ---CCSSCSSCTTCE---------EEECSSCEEEECCSSEESTTTCE----------ECCTTSGGGSCS------SBCCC
T ss_pred CcCcCCCCCCCCCCE---------eECCCCCEEEecCCCCcCCcCCC----------CccccCCCCCCc------CCCCC
Confidence 456788889998887 8654 45899999999999975 123331 2232 144 3
Q ss_pred C--CCCeeecCCCCc----cCCCC
Q psy15475 136 P--ITGQCLCRPGVT----GTRCE 153 (204)
Q Consensus 136 ~--~~g~C~C~~g~~----G~~C~ 153 (204)
. ..+.|.|++||+ |.+|+
T Consensus 102 n~~g~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 102 GADSKVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp CSSSCCCCBCCTTEEECTTSSSEE
T ss_pred CCCCCEEeEcCCCcEeCCCCCcCC
Confidence 2 235788999988 66664
No 42
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.30 E-value=2.5e-05 Score=56.74 Aligned_cols=73 Identities=23% Similarity=0.426 Sum_probs=42.8
Q ss_pred eecccccCCCCCCCCCccCCCC--ccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCC---ccCCCCCCCcc
Q psy15475 11 MDILLCVGPPSDILKSVAGTTG--DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG---TLETETFTPVC 85 (204)
Q Consensus 11 ~~~~~c~~~~~~~~~~C~~~~g--~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~c~C~~~g---~~~~~~~~~~C 85 (204)
.|+..|...||.++++|....+ .|. |+++|+|..| +..++.|.++++.+++ + |
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~-C~~G~~G~~C------------~~~~~~c~~c~~~~~~C~~~---------C 102 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICF-CLPAFEGRNC------------ETHKDDQLICVNENGGCEQY---------C 102 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEE-CCTTEESTTS------------CEEGGGCCSTTTGGGGCSSE---------E
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEee-CCCCccCCcc------------ccCccccccccCCCCCccCE---------e
Confidence 3566788788888888866443 364 6666655555 3222234444444333 2 6
Q ss_pred cCC---CceeecCCCCc----cCCCcc
Q psy15475 86 DQL---TGQCSCKPHVV----GTNCDQ 105 (204)
Q Consensus 86 ~~~---~g~C~C~~g~~----G~~C~~ 105 (204)
.+. ...|.|++||. |.+|+.
T Consensus 103 ~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 103 SDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp ECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred ECCCCCCEEEECCCCceECCCCCCCCC
Confidence 443 34788888887 666653
No 43
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.17 E-value=0.00072 Score=55.16 Aligned_cols=69 Identities=29% Similarity=0.472 Sum_probs=45.1
Q ss_pred eecccccCCCCCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCcC---CCCCCCCccCCCCCCCcccC
Q psy15475 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP---CQCYIPGTLETETFTPVCDQ 87 (204)
Q Consensus 11 ~~~~~c~~~~~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~~~C~~---c~C~~~g~~~~~~~~~~C~~ 87 (204)
.|+..|...||.+++.|... ..++.| .|++||.|..|+.++++|.. .+|.+ . |.+
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~----------~~~~~C-~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~---------C~~ 60 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDS----------IWGYTC-TCSPGYEGSNCELAKNECHPERTDGCQH--F---------CLP 60 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCC----------SSSCCC-CCSSSCCSSSSCCCSSSCCTTCTTSCSS--E---------EEC
T ss_pred ccCCcCCCCCCCCCCEeECC----------CCCeEE-ECCCCCcCCccccCcccCCCCCCCCCcC--c---------ccc
Confidence 45667887888777766432 234566 67777777777766677875 56664 4 754
Q ss_pred C--CceeecCCCCccC
Q psy15475 88 L--TGQCSCKPHVVGT 101 (204)
Q Consensus 88 ~--~g~C~C~~g~~G~ 101 (204)
. ...|.|+++|.|.
T Consensus 61 ~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 61 GQESYTCSCAQGYRLG 76 (317)
T ss_dssp CSSSCEEECCTTEECC
T ss_pred CCCeeEEecccccccc
Confidence 3 4588999888873
No 44
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.08 E-value=0.00049 Score=38.24 Aligned_cols=34 Identities=29% Similarity=0.721 Sum_probs=27.4
Q ss_pred CCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCc
Q psy15475 62 KGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCD 104 (204)
Q Consensus 62 ~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~ 104 (204)
+++|.+.+|.++++ |... ...|.|+++|.|.+|+
T Consensus 3 ~d~C~~~pC~ngg~---------C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 3 GDQCESNPCLNGGS---------CKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCE---------EEEETTEEEEECCTTCCSTTSC
T ss_pred cccCCCCCCCCCCE---------eEcCCCceEeECCCCCcCCccC
Confidence 45688889998888 8643 3489999999999987
No 45
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.96 E-value=0.00013 Score=55.92 Aligned_cols=74 Identities=26% Similarity=0.439 Sum_probs=20.8
Q ss_pred eeecccccCCCCCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCC-CCCcC--CCCCCCCccCCCCCCCccc
Q psy15475 10 VMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPK-GDCEP--CQCYIPGTLETETFTPVCD 86 (204)
Q Consensus 10 ~~~~~~c~~~~~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~-~~C~~--c~C~~~g~~~~~~~~~~C~ 86 (204)
..|+..|...||.++++|... ..++.| .|++||.|..|...+ +.|.. .+|.+ . |.
T Consensus 39 c~dideC~~~pC~ngg~C~n~----------~g~y~C-~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~---------C~ 96 (195)
T 1nfu_B 39 YKDGDQCETSPCQNQGKCKDG----------LGEYTC-TCLEGFEGKNCELFTRKLCSLDNGDCDQ--F---------CH 96 (195)
T ss_dssp -----------------------------------------------------CCGGGTGGGGCSS--E---------EE
T ss_pred CCCCcccCCCCCCCCCEeECC----------CCCeeE-eCCCCceeccccccccccccCCCCCCCC--E---------eE
Confidence 346666776777776666432 234455 566666676666543 45654 33543 3 75
Q ss_pred CC--CceeecCCCCc----cCCCcc
Q psy15475 87 QL--TGQCSCKPHVV----GTNCDQ 105 (204)
Q Consensus 87 ~~--~g~C~C~~g~~----G~~C~~ 105 (204)
+. .+.|.|++||. |.+|+.
T Consensus 97 n~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 97 EEQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp EETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCCCCeEEECCCCceeCCCCCcccc
Confidence 43 35799999998 888764
No 46
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.94 E-value=6e-05 Score=55.81 Aligned_cols=112 Identities=23% Similarity=0.505 Sum_probs=62.4
Q ss_pred CCCCc-CCCCCCCCccCCCCCCCcccCC--CceeecCCCCc----cCCCcccCCCccccCCCCCCcc--CCCCCCCCCCC
Q psy15475 62 KGDCE-PCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVV----GTNCDQCEVGHYNIISGEGCKS--CDCDPVGSLNR 132 (204)
Q Consensus 62 ~~~C~-~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~----G~~C~~C~~G~~g~~~~~~C~~--c~C~~~g~~~~ 132 (204)
+++|. +.+|. +++ |.+. .++|.|++||. |.+|+.-.+ ..|.. ..|.. ..++
T Consensus 3 ideC~~~~~C~-~~~---------C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~--------~~C~~~~~~c~~--~~~~ 62 (162)
T 1uzk_A 3 VNECLDPTTCI-SGN---------CVNTPGSYICDCPPDFELNPTRVGCVDTRS--------GNCYLDIRPRGD--NGDT 62 (162)
T ss_dssp CCGGGSTTSSB-TSE---------EEEETTEEEEECCTTCEECTTSSBEECCCC--------EEEEEEC-----------
T ss_pred cccCCCCCCCC-CCE---------eECCCCCEEEeCCCCCeECCCCCcccCCCC--------CcccCCCcccCC--CCCC
Confidence 45676 35675 455 8654 35899999998 777753111 01321 01110 0123
Q ss_pred cccCC------CCeeecCCCCc-cCCCCCC------------CC--CcccCC-------CCCCcc--ccCCCCCCCCCCC
Q psy15475 133 TCDPI------TGQCLCRPGVT-GTRCELC------------QP--NHYGFS-------LDGCKP--CMCDPIGSNSLQC 182 (204)
Q Consensus 133 ~C~~~------~g~C~C~~g~~-G~~C~~C------------~~--g~~g~~-------~~~c~~--C~C~~~g~~~~~C 182 (204)
+|... ...|.|++||. |..|+.| ++ ||.+.. ++.|.. -.|.+ +.|
T Consensus 63 ~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-----g~C 137 (162)
T 1uzk_A 63 ACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-----GKC 137 (162)
T ss_dssp -CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-----SEE
T ss_pred cccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-----CEe
Confidence 45432 34688999998 7777754 33 777742 233432 22442 257
Q ss_pred C---CCCcccCCCCCCccc
Q psy15475 183 D---PSGQCPGVFMNRAEM 198 (204)
Q Consensus 183 ~---~~g~C~c~~~~~g~~ 198 (204)
. .+.+|.|.+||+|..
T Consensus 138 ~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 138 INTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp EECSSCEEEECCTTCCBCT
T ss_pred EcCCCCEEeeCCCCccCCC
Confidence 6 368999999999964
No 47
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.87 E-value=0.00053 Score=47.70 Aligned_cols=62 Identities=26% Similarity=0.447 Sum_probs=36.2
Q ss_pred CCCCCccCCCCCCCcccCC--CceeecCCCCccCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccCC--CCeeecCC
Q psy15475 70 CYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI--TGQCLCRP 145 (204)
Q Consensus 70 C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~~--~g~C~C~~ 145 (204)
|.++++ |.+. .+.|.|++||.|..|+.-.. ...|.. .+.+ ...+|... .+.|.|++
T Consensus 22 C~~~g~---------C~~~~~~y~C~C~~G~~G~~C~~~~~-------~~~C~~---~~~~-C~~~C~n~~g~y~C~C~~ 81 (114)
T 1aut_L 22 CCGHGT---------CIDGIGSFSCDCRSGWEGRFCQREVS-------FLNCSL---DNGG-CTHYCLEEVGWRRCSCAP 81 (114)
T ss_dssp TTTSEE---------ECCCSSCCCEEECTTEESTTSCEECC-------SSSSSS---GGGG-CSSEEEECSSSEEEECCT
T ss_pred CCCcCC---------CCCCCCCcEeeCCCCCcCCCcCcCCc-------CCcCcC---CCCC-CCCEeECCCCCEEeECCC
Confidence 767776 7553 45899999999999875211 112321 1100 11255433 34799999
Q ss_pred CCccCC
Q psy15475 146 GVTGTR 151 (204)
Q Consensus 146 g~~G~~ 151 (204)
||+|..
T Consensus 82 G~~~~~ 87 (114)
T 1aut_L 82 GYKLGD 87 (114)
T ss_dssp TEEECT
T ss_pred CeeECC
Confidence 998543
No 48
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.86 E-value=0.00017 Score=52.38 Aligned_cols=43 Identities=26% Similarity=0.520 Sum_probs=27.3
Q ss_pred CCCCCCC---CCCCCCCCCCCcC--CCCCCCCccCCCCCCCcccCCC--ceeecCCCCccC
Q psy15475 48 TCLPGYF---GDALALPKGDCEP--CQCYIPGTLETETFTPVCDQLT--GQCSCKPHVVGT 101 (204)
Q Consensus 48 ~C~~g~~---g~~c~~~~~~C~~--c~C~~~g~~~~~~~~~~C~~~~--g~C~C~~g~~G~ 101 (204)
.|++||. |..|+ ++++|.. .+|.+ ++ |.+.. ++|.|++||.|.
T Consensus 91 ~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~---------C~n~~g~y~C~C~~Gy~g~ 140 (147)
T 2w86_A 91 ICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GL---------CVNTRGSFKCQCPSGMTLD 140 (147)
T ss_dssp TTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SE---------EEEETTEEEEECCTTCCBC
T ss_pred cCCCccccCCCCccC-ccccccCCCCCCCC-CE---------EECCCCCEEeeCCCCCccC
Confidence 5788884 77775 4566763 33664 35 75443 478888777764
No 49
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.83 E-value=0.00019 Score=51.51 Aligned_cols=73 Identities=26% Similarity=0.457 Sum_probs=18.8
Q ss_pred eecccccCCCCCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCC-CCCcC--CCCCCCCccCCCCCCCcccC
Q psy15475 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPK-GDCEP--CQCYIPGTLETETFTPVCDQ 87 (204)
Q Consensus 11 ~~~~~c~~~~~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~-~~C~~--c~C~~~g~~~~~~~~~~C~~ 87 (204)
.++..|...||.++++|.. ...++.| .|++||.|..|...+ +.|.. .+|.+ + |.+
T Consensus 40 ~d~d~C~~~pC~n~g~C~~----------~~~~y~C-~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~---------C~~ 97 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKD----------GLGEYTC-TCLEGFEGKNCELFTRKLCSLDNGDCDQ--F---------CHE 97 (134)
T ss_dssp ----------------------------------------------------CCGGGTGGGGCSS--E---------EEE
T ss_pred CCcCcCCCCCCCCcCCccc----------CCCCEEe-eCCCCccCCccccCCCCccccCCCCCCC--E---------eEC
Confidence 4555666667666655533 2334556 566666666666433 44654 23443 3 654
Q ss_pred C--CceeecCCCCc----cCCCcc
Q psy15475 88 L--TGQCSCKPHVV----GTNCDQ 105 (204)
Q Consensus 88 ~--~g~C~C~~g~~----G~~C~~ 105 (204)
. ...|.|++||. |.+|+.
T Consensus 98 ~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 98 EQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp ETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCCCEEEECCCCcEECCCCCccCc
Confidence 3 34788888888 666653
No 50
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.65 E-value=0.00025 Score=54.31 Aligned_cols=70 Identities=30% Similarity=0.687 Sum_probs=18.2
Q ss_pred CCCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCcccCCCccccCCCCCCcc--CCCCCCCCCCCcccC
Q psy15475 61 PKGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS--CDCDPVGSLNRTCDP 136 (204)
Q Consensus 61 ~~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~--c~C~~~g~~~~~C~~ 136 (204)
+++.|...+|.++++ |... .+.|.|++||.|.+|+.=. .+.|.. ..|. .+|..
T Consensus 41 dideC~~~pC~ngg~---------C~n~~g~y~C~C~~Gf~G~~Ce~~i--------~deC~~~~~~C~------~~C~n 97 (195)
T 1nfu_B 41 DGDQCETSPCQNQGK---------CKDGLGEYTCTCLEGFEGKNCELFT--------RKLCSLDNGDCD------QFCHE 97 (195)
T ss_dssp ---------------------------------------------------------CCGGGTGGGGCS------SEEEE
T ss_pred CCcccCCCCCCCCCE---------eECCCCCeeEeCCCCceeccccccc--------cccccCCCCCCC------CEeEC
Confidence 456788889998887 8654 4589999999999886400 022432 2232 25643
Q ss_pred C--CCeeecCCCCc----cCCCC
Q psy15475 137 I--TGQCLCRPGVT----GTRCE 153 (204)
Q Consensus 137 ~--~g~C~C~~g~~----G~~C~ 153 (204)
. .+.|.|++||+ |..|+
T Consensus 98 ~~gsy~C~C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 98 EQNSVVCSCARGYTLADNGKACI 120 (195)
T ss_dssp ETTEEEEECCTTEEECTTSSCEE
T ss_pred CCCCeEEECCCCceeCCCCCccc
Confidence 3 34799999999 88775
No 51
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.55 E-value=0.0003 Score=51.99 Aligned_cols=57 Identities=25% Similarity=0.504 Sum_probs=34.2
Q ss_pred ceeecCCCCc-cCCCcccC------------C--CccccCC------CCCCcc--CCCCCCCCCCCcccCC--CCeeecC
Q psy15475 90 GQCSCKPHVV-GTNCDQCE------------V--GHYNIIS------GEGCKS--CDCDPVGSLNRTCDPI--TGQCLCR 144 (204)
Q Consensus 90 g~C~C~~g~~-G~~C~~C~------------~--G~~g~~~------~~~C~~--c~C~~~g~~~~~C~~~--~g~C~C~ 144 (204)
..|.|++||. |..|+.|. + ||.+... .++|.. ..|. +++|... .++|.|+
T Consensus 75 ~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~-----~g~C~n~~gsy~C~C~ 149 (162)
T 1uzk_A 75 ASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ-----GGKCINTFGSFQCRCP 149 (162)
T ss_dssp HHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGB-----TSEEEECSSCEEEECC
T ss_pred ceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcC-----CCEeEcCCCCEEeeCC
Confidence 4788999998 78887553 3 7776422 233432 1233 2456543 3468888
Q ss_pred CCCccCC
Q psy15475 145 PGVTGTR 151 (204)
Q Consensus 145 ~g~~G~~ 151 (204)
+||+|..
T Consensus 150 ~Gy~g~~ 156 (162)
T 1uzk_A 150 TGYYLNE 156 (162)
T ss_dssp TTCCBCT
T ss_pred CCccCCC
Confidence 8887754
No 52
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=96.46 E-value=0.00032 Score=49.18 Aligned_cols=46 Identities=33% Similarity=0.730 Sum_probs=29.7
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCCCCcC-CCCCCCCccCCCCCCCcccCC--CceeecCCCCcc
Q psy15475 42 GGPQCDTCLPGYF---GDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVG 100 (204)
Q Consensus 42 ~G~~C~~C~~g~~---g~~c~~~~~~C~~-c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G 100 (204)
.++.| .|++||. |..|. ++++|.. .+| .++ |.+. ..+|.|++||+|
T Consensus 59 ~~y~C-~C~~Gy~~~~g~~C~-dideC~~~~~C--~~~---------C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 59 TQASC-ECPEGYILDDGFICT-DIDECENGGFC--SGV---------CHNLPGTFECICGPDSAL 110 (118)
T ss_dssp STTCE-ECCTTEEEETTTEEE-ECCHHHHCSSC--SSE---------EEECSSSEEEEECSSSSC
T ss_pred CCeEe-ECCCCccCCCCCccc-cccccCCCCCC--cCe---------EEeCCCCEEEECCCCCcc
Confidence 45667 7888988 66663 4556765 556 344 6543 347888887765
No 53
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.45 E-value=0.0047 Score=40.17 Aligned_cols=64 Identities=25% Similarity=0.670 Sum_probs=37.7
Q ss_pred CCCCcC-CCCCCCCccCCCCCCCcccCC--CceeecCCCCc--cCCCcccCCCccccCCCCCCc-cCCCCCCCCCCCccc
Q psy15475 62 KGDCEP-CQCYIPGTLETETFTPVCDQL--TGQCSCKPHVV--GTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCD 135 (204)
Q Consensus 62 ~~~C~~-c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~--G~~C~~C~~G~~g~~~~~~C~-~c~C~~~g~~~~~C~ 135 (204)
+++|.. .+|.+ +. |.+. ...|.|++||. |..|+. .+.|. ..+|. +++|.
T Consensus 5 ideC~~~~~C~~-g~---------C~n~~g~y~C~C~~Gy~~~g~~C~d----------ideC~~~~~C~-----~~~C~ 59 (82)
T 1emn_A 5 MDECKEPDVCKH-GQ---------CINTDGSYRCECPFGYILAGNECVD----------TDECSVGNPCG-----NGTCK 59 (82)
T ss_dssp CCSSSSTTSCSS-SE---------ECCCSSCCCEECCTTEEEETTEEEE----------CCGGGTCCTTS-----SSCEE
T ss_pred cccCCCCCCcCC-CE---------EEecCCCEEEECCCCeECCCCccCC----------cccccCCCCCC-----CCEeE
Confidence 445653 56754 55 7544 45899999997 776642 23443 23343 13565
Q ss_pred CCC--CeeecCCCCccC
Q psy15475 136 PIT--GQCLCRPGVTGT 150 (204)
Q Consensus 136 ~~~--g~C~C~~g~~G~ 150 (204)
... +.|.|++||+|.
T Consensus 60 n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 60 NVIGGFECTCEEGFEPG 76 (82)
T ss_dssp ECSSSEEECCSSSSCCC
T ss_pred CCCCCEEeECCCCeEeC
Confidence 433 468888888764
No 54
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.44 E-value=0.0016 Score=47.32 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=21.7
Q ss_pred eeecccccCCCCCCCCCccCCCC--ccccCCCCcCCCCCC
Q psy15475 10 VMDILLCVGPPSDILKSVAGTTG--DCLKCIYNTGGPQCD 47 (204)
Q Consensus 10 ~~~~~~c~~~~~~~~~~C~~~~g--~C~~C~~~~~G~~C~ 47 (204)
-.||..|...||.++++|....+ .|. |+++|.|..|+
T Consensus 45 c~dideC~~~pC~n~g~C~~~~~~y~C~-C~~G~~G~~C~ 83 (146)
T 1x7a_L 45 YVDGDQCEPNPCLNGGLCKDDINSYECW-CQVGFEGKNCE 83 (146)
T ss_dssp -----CCSSCSSCTTCEEEECSSCEEEE-CCSSEESTTTC
T ss_pred CCCcCcCCCCCCCCCCEeECCCCCEEEe-cCCCCcCCcCC
Confidence 34666787788888888865443 464 66666666553
No 55
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.43 E-value=0.00011 Score=53.41 Aligned_cols=33 Identities=21% Similarity=0.529 Sum_probs=24.4
Q ss_pred CCCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCC
Q psy15475 61 PKGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNC 103 (204)
Q Consensus 61 ~~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C 103 (204)
++++|...+|.+ ++ |.+. .++|.|++||+|..+
T Consensus 3 dideC~~~pC~n-g~---------C~n~~g~y~C~C~~G~~g~~~ 37 (147)
T 2w86_A 3 DIDECESSPCIN-GV---------CKNSPGSFICECSSESTLDPT 37 (147)
T ss_dssp CCCGGGGCCSBT-SE---------EEEETTEEEEECCTTEEECTT
T ss_pred cCccCcCCCCCC-CE---------eECCCCCEEeECCCCcccCCC
Confidence 456788888874 56 8654 348999999998755
No 56
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.42 E-value=0.0013 Score=39.66 Aligned_cols=36 Identities=11% Similarity=-0.026 Sum_probs=25.5
Q ss_pred eecccccCCCCCCCCCccCC-------CCccccCCCCcCCCCCC
Q psy15475 11 MDILLCVGPPSDILKSVAGT-------TGDCLKCIYNTGGPQCD 47 (204)
Q Consensus 11 ~~~~~c~~~~~~~~~~C~~~-------~g~C~~C~~~~~G~~C~ 47 (204)
.++..|...||.++++|... ...|. |+++|+|.+|+
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~-C~~g~~G~~CE 48 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCK-CPNEFTGDRCQ 48 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEE-ECTTEESTTSC
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEe-CCCCCcCCCcC
Confidence 46677888999999999421 22474 77777777665
No 57
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.38 E-value=0.00046 Score=49.50 Aligned_cols=70 Identities=30% Similarity=0.680 Sum_probs=16.8
Q ss_pred CCCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCcccCCCccccCCCCCCcc--CCCCCCCCCCCcccC
Q psy15475 61 PKGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS--CDCDPVGSLNRTCDP 136 (204)
Q Consensus 61 ~~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~--c~C~~~g~~~~~C~~ 136 (204)
+++.|.+.+|.++++ |.+. .+.|.|++||.|.+|+.=. .+.|.. ..|. .+|..
T Consensus 41 d~d~C~~~pC~n~g~---------C~~~~~~y~C~C~~G~~G~~C~~~i--------~d~C~~~~~~C~------~~C~~ 97 (134)
T 2vh0_B 41 DGDQCETSPCQNQGK---------CKDGLGEYTCTCLEGFEGKNCELFT--------RKLCSLDNGDCD------QFCHE 97 (134)
T ss_dssp ---------------------------------------------------------CCGGGTGGGGCS------SEEEE
T ss_pred CcCcCCCCCCCCcCC---------cccCCCCEEeeCCCCccCCccccCC--------CCccccCCCCCC------CEeEC
Confidence 345688888988887 8654 4589999999998886400 022332 2232 14543
Q ss_pred CC--CeeecCCCCc----cCCCC
Q psy15475 137 IT--GQCLCRPGVT----GTRCE 153 (204)
Q Consensus 137 ~~--g~C~C~~g~~----G~~C~ 153 (204)
.. +.|.|++||+ |.+|+
T Consensus 98 ~~g~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 98 EQNSVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp ETTEEEEECCTTEEECTTSSCEE
T ss_pred CCCCEEEECCCCcEECCCCCccC
Confidence 33 4699999998 76664
No 58
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.31 E-value=0.0063 Score=49.50 Aligned_cols=65 Identities=26% Similarity=0.659 Sum_probs=43.0
Q ss_pred CCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCcccCCCccccCCCCCCcc---CCCCCCCCCCCcccC
Q psy15475 62 KGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS---CDCDPVGSLNRTCDP 136 (204)
Q Consensus 62 ~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~~C~~G~~g~~~~~~C~~---c~C~~~g~~~~~C~~ 136 (204)
.++|...+|.++++ |.+. ...|.|++||.|.+|+. ..++|.. .+|. .+|..
T Consensus 5 ~~~C~~~pC~~~g~---------C~~~~~~~~C~C~~g~~g~~C~~---------~~~eC~~~~~~~C~------~~C~~ 60 (317)
T 3h5c_B 5 GSPCISQPCLHNGS---------CQDSIWGYTCTCSPGYEGSNCEL---------AKNECHPERTDGCQ------HFCLP 60 (317)
T ss_dssp -CCTTSCCCTTTCC---------CCCCSSSCCCCCSSSCCSSSSCC---------CSSSCCTTCTTSCS------SEEEC
T ss_pred CCcCCCCCCCCCCE---------eECCCCCeEEECCCCCcCCcccc---------CcccCCCCCCCCCc------Ccccc
Confidence 35688888988887 8543 35899999999999873 0234432 2333 15554
Q ss_pred C--CCeeecCCCCccC
Q psy15475 137 I--TGQCLCRPGVTGT 150 (204)
Q Consensus 137 ~--~g~C~C~~g~~G~ 150 (204)
. ...|.|++||.|.
T Consensus 61 ~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 61 GQESYTCSCAQGYRLG 76 (317)
T ss_dssp CSSSCEEECCTTEECC
T ss_pred CCCeeEEecccccccc
Confidence 3 3478999988874
No 59
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.26 E-value=0.0025 Score=35.26 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=25.9
Q ss_pred ecccccCCCCCCCCCccCCCC--ccccCCCCcCCCCCC
Q psy15475 12 DILLCVGPPSDILKSVAGTTG--DCLKCIYNTGGPQCD 47 (204)
Q Consensus 12 ~~~~c~~~~~~~~~~C~~~~g--~C~~C~~~~~G~~C~ 47 (204)
|+..|...|+.++++|....+ .|. |+.+|.|.+|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~-C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECW-CPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEE-CCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeE-CCCCCcCCccC
Confidence 566788889999999966444 475 88888777774
No 60
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=96.07 E-value=0.0056 Score=50.45 Aligned_cols=52 Identities=21% Similarity=0.429 Sum_probs=39.6
Q ss_pred ceeeeeeeccc---ccCCCCCCCCCccCCCC--ccccCCCCcCCCCCCCCCCCCCCCCCC
Q psy15475 5 VHHVSVMDILL---CVGPPSDILKSVAGTTG--DCLKCIYNTGGPQCDTCLPGYFGDALA 59 (204)
Q Consensus 5 ~~~~~~~~~~~---c~~~~~~~~~~C~~~~g--~C~~C~~~~~G~~C~~C~~g~~g~~c~ 59 (204)
.+.++|.||.+ |.|+ .+...|....+ +| .|.+++.|..|++|.++|++.++.
T Consensus 256 ~yyYAI~di~v~G~C~Cn--GHA~~C~~~~g~~~C-~C~HnT~G~~Ce~C~p~y~~~pw~ 312 (338)
T 3tbd_A 256 KYFYAISNIEVIGRCKCN--LHANLCSMREGSLQC-ECEHNTTGPDCGKCKKNFRTRSWR 312 (338)
T ss_dssp GCCCEEEEEECEEEECCT--TBCSCEEEETTEEEE-CCCTTEESTTSCEECTTCBSSCCC
T ss_pred eeEEEeecceeecccccc--CCcCccCCCCCCcee-cCCCCCCCCCCcccCccccCCCCC
Confidence 45677777744 5553 45567776555 59 499999999999999999999886
No 61
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.05 E-value=0.0016 Score=45.18 Aligned_cols=68 Identities=22% Similarity=0.320 Sum_probs=32.0
Q ss_pred eecccccCCC--------CCCCCCccCCCCccccCCCCcCCCCCCCCCCCCCCCCCCCCC--CCCcCC--CCCCCCccCC
Q psy15475 11 MDILLCVGPP--------SDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPK--GDCEPC--QCYIPGTLET 78 (204)
Q Consensus 11 ~~~~~c~~~~--------~~~~~~C~~~~g~C~~C~~~~~G~~C~~C~~g~~g~~c~~~~--~~C~~c--~C~~~g~~~~ 78 (204)
.|+..|...| +.++++|... ..++.| .|++||.|..|+..+ ++|... .|.+ +
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~----------~~~y~C-~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~--- 67 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDG----------IGSFSC-DCRSGWEGRFCQREVSFLNCSLDNGGCTH--Y--- 67 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCC----------SSCCCE-EECTTEESTTSCEECCSSSSSSGGGGCSS--E---
T ss_pred eecccccCCCccccccccCCCcCCCCCC----------CCCcEe-eCCCCCcCCCcCcCCcCCcCcCCCCCCCC--E---
Confidence 4566677666 5555555332 334445 555555555555221 234321 1221 2
Q ss_pred CCCCCcccCC--CceeecCCCCcc
Q psy15475 79 ETFTPVCDQL--TGQCSCKPHVVG 100 (204)
Q Consensus 79 ~~~~~~C~~~--~g~C~C~~g~~G 100 (204)
|.+. .+.|.|++||.|
T Consensus 68 ------C~n~~g~y~C~C~~G~~~ 85 (114)
T 1aut_L 68 ------CLEEVGWRRCSCAPGYKL 85 (114)
T ss_dssp ------EEECSSSEEEECCTTEEE
T ss_pred ------eECCCCCEEeECCCCeeE
Confidence 6443 347878777774
No 62
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.99 E-value=0.0042 Score=40.87 Aligned_cols=52 Identities=21% Similarity=0.463 Sum_probs=31.7
Q ss_pred CCcCCCCCCCCCCCCC----CCCCCCCCCCCcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCc
Q psy15475 39 YNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCD 104 (204)
Q Consensus 39 ~~~~G~~C~~C~~g~~----g~~c~~~~~~C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~ 104 (204)
....++.| .|++||. |..|+ ++++|...+|. ++ |.+. .+.|.|+ ++.|.+++
T Consensus 20 n~~g~y~C-~C~~G~~~~~~g~~C~-dideC~~~~C~--~~---------C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 20 NIPGDFEC-ECPEGYRYNLKSKSCE-DIDECSENMCA--QL---------CVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp CBTTBCCC-SSSTTCEEETTTTEEE-CCCHHHHSCCS--SE---------ECCCSSSCCEECC-SSSCCBCC
T ss_pred CCCCCEEE-ECCCCceECCCCCcCC-CcCeeCCCCCC--CE---------EEccCCCEEEECC-CCcCCccc
Confidence 33445667 6788887 55664 45667766675 34 7544 3578886 66655443
No 63
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.99 E-value=0.0075 Score=35.82 Aligned_cols=40 Identities=20% Similarity=0.564 Sum_probs=28.7
Q ss_pred CCCcCC---CCCCCCccCCCCCCCccc--CC--CceeecCCCCccCCCcccCCCcc
Q psy15475 63 GDCEPC---QCYIPGTLETETFTPVCD--QL--TGQCSCKPHVVGTNCDQCEVGHY 111 (204)
Q Consensus 63 ~~C~~c---~C~~~g~~~~~~~~~~C~--~~--~g~C~C~~g~~G~~C~~C~~G~~ 111 (204)
++|.+. +|.++++ |. .. ...|.|++||+|.+|+.=...||
T Consensus 4 ~~C~~~~~~pC~ngg~---------C~~~~~~~~~~C~C~~G~~G~~Ce~~~~~~~ 50 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGV---------CMHIESLDSYTCNCVIGYSGDRCQTRDLRWW 50 (53)
T ss_dssp CCCCTTSSCSSCSSCE---------EEEESSSSCEEEECCTTCCSSSSCCCSCCCC
T ss_pred ccCCCCCCCcCCCCcE---------EEeeCCCCCEEEECCCCCcCCcCCccCcccc
Confidence 356655 8988888 86 33 45899999999999986443333
No 64
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=95.85 E-value=0.0065 Score=34.78 Aligned_cols=32 Identities=19% Similarity=0.409 Sum_probs=24.4
Q ss_pred CcCC---CCCCCCccCCCCCCCccc--C--CCceeecCCCCccCCCcc
Q psy15475 65 CEPC---QCYIPGTLETETFTPVCD--Q--LTGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 65 C~~c---~C~~~g~~~~~~~~~~C~--~--~~g~C~C~~g~~G~~C~~ 105 (204)
|.+. +|.++++ |. . ....|.|++||+|.+|+.
T Consensus 3 C~~~~~~pC~ngg~---------C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 3 XPSSYDGYCLNGGV---------XMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CTTCCSSCCSSSCE---------EEECTTTSSEEEECCTTEETTTTCE
T ss_pred cccCCCCCCCCCCE---------EEeecCCCCEEEEcCCCCcCCcCCc
Confidence 4455 8888888 85 2 245899999999999974
No 65
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.83 E-value=0.003 Score=36.54 Aligned_cols=32 Identities=28% Similarity=0.786 Sum_probs=24.1
Q ss_pred CCcC---CCCCCCCccCCCCCCCcccCC----CceeecCCCCccCCCcc
Q psy15475 64 DCEP---CQCYIPGTLETETFTPVCDQL----TGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 64 ~C~~---c~C~~~g~~~~~~~~~~C~~~----~g~C~C~~g~~G~~C~~ 105 (204)
+|.+ .+|.+ |+ |... ...|.|++||+|.+|+.
T Consensus 5 ~C~~~~~~pC~n-G~---------C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 5 KCSSDMNGYCLH-GQ---------CIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp CCCTTCCSSCSS-EE---------EEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cCCCCCCCCCCC-CE---------eeccCCCCCEEEECCCCCccCCCCc
Confidence 4555 68887 77 8532 35899999999999974
No 66
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=95.77 E-value=0.00031 Score=49.21 Aligned_cols=46 Identities=24% Similarity=0.684 Sum_probs=27.7
Q ss_pred CceeecCCCCc---cCCCcccCCCccccCCCCCCcc-CCCCCCCCCCCcccCC--CCeeecCCCCccC
Q psy15475 89 TGQCSCKPHVV---GTNCDQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPI--TGQCLCRPGVTGT 150 (204)
Q Consensus 89 ~g~C~C~~g~~---G~~C~~C~~G~~g~~~~~~C~~-c~C~~~g~~~~~C~~~--~g~C~C~~g~~G~ 150 (204)
...|.|++||. |.+|+. .++|.. .+| +++|... .++|.|++||+|.
T Consensus 60 ~y~C~C~~Gy~~~~g~~C~d----------ideC~~~~~C------~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 60 QASCECPEGYILDDGFICTD----------IDECENGGFC------SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp TTCEECCTTEEEETTTEEEE----------CCHHHHCSSC------SSEEEECSSSEEEEECSSSSCE
T ss_pred CeEeECCCCccCCCCCcccc----------ccccCCCCCC------cCeEEeCCCCEEEECCCCCccC
Confidence 45788888888 666642 233433 233 2456433 3479999998763
No 67
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=95.76 E-value=0.0028 Score=41.27 Aligned_cols=50 Identities=26% Similarity=0.659 Sum_probs=31.1
Q ss_pred CcCCCCCCCCCCCCC--CCCCCCCCCCCc-CCCCCCCCccCCCCCCCcccCC--CceeecCCCCccC
Q psy15475 40 NTGGPQCDTCLPGYF--GDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGT 101 (204)
Q Consensus 40 ~~~G~~C~~C~~g~~--g~~c~~~~~~C~-~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~ 101 (204)
...++.| .|++||. |..|. ++++|. ..+|.+ ++ |.+. ...|.|++||.|.
T Consensus 22 ~~g~y~C-~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~---------C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 22 TDGSYRC-ECPFGYILAGNECV-DTDECSVGNPCGN-GT---------CKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp CSSCCCE-ECCTTEEEETTEEE-ECCGGGTCCTTSS-SC---------EEECSSSEEECCSSSSCCC
T ss_pred cCCCEEE-ECCCCeECCCCccC-CcccccCCCCCCC-CE---------eECCCCCEEeECCCCeEeC
Confidence 3345667 7777775 66663 445676 556764 35 7554 3478888777764
No 68
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.73 E-value=0.0085 Score=39.33 Aligned_cols=52 Identities=21% Similarity=0.623 Sum_probs=29.7
Q ss_pred ccCC--CceeecCCCCc----cCCCcccCCCccccCCCCCCccCCCCCCCCCCCcccCC--CCeeecCCCCccCCCC
Q psy15475 85 CDQL--TGQCSCKPHVV----GTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI--TGQCLCRPGVTGTRCE 153 (204)
Q Consensus 85 C~~~--~g~C~C~~g~~----G~~C~~C~~G~~g~~~~~~C~~c~C~~~g~~~~~C~~~--~g~C~C~~g~~G~~C~ 153 (204)
|.+. ...|.|++||. |..|+. .++|...+|. ++|... .+.|.|+ |+.|.+++
T Consensus 18 C~n~~g~y~C~C~~G~~~~~~g~~C~d----------ideC~~~~C~------~~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 18 CKNIPGDFECECPEGYRYNLKSKSCED----------IDECSENMCA------QLCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp CCCBTTBCCCSSSTTCEEETTTTEEEC----------CCHHHHSCCS------SEECCCSSSCCEECC-SSSCCBCC
T ss_pred eECCCCCEEEECCCCceECCCCCcCCC----------cCeeCCCCCC------CEEEccCCCEEEECC-CCcCCccc
Confidence 7543 35788888888 555531 2344433343 345433 3578887 66666654
No 69
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=95.67 E-value=0.00077 Score=40.13 Aligned_cols=29 Identities=21% Similarity=0.511 Sum_probs=22.3
Q ss_pred CCCCCCCccCCCCCCCcccC----C--CceeecCCCCccCCCcc
Q psy15475 68 CQCYIPGTLETETFTPVCDQ----L--TGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 68 c~C~~~g~~~~~~~~~~C~~----~--~g~C~C~~g~~G~~C~~ 105 (204)
.+|.++|+ |.. . ...|.|+++|+|.+|+.
T Consensus 14 ~pC~NGGt---------C~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAH---------CFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp HTSCTTCE---------EEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CcCCCCCE---------EecCccCCCCCEEEECCCCCcCCCCcc
Confidence 36778887 863 1 34899999999999974
No 70
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.35 E-value=0.0073 Score=39.54 Aligned_cols=51 Identities=24% Similarity=0.543 Sum_probs=29.4
Q ss_pred ccCC--CceeecCCCCc-----cCCCcccCCCccccCCCCCCccC--CCCCCCCCCCcccCCC--CeeecCCCCccC
Q psy15475 85 CDQL--TGQCSCKPHVV-----GTNCDQCEVGHYNIISGEGCKSC--DCDPVGSLNRTCDPIT--GQCLCRPGVTGT 150 (204)
Q Consensus 85 C~~~--~g~C~C~~g~~-----G~~C~~C~~G~~g~~~~~~C~~c--~C~~~g~~~~~C~~~~--g~C~C~~g~~G~ 150 (204)
|.+. ...|.|++||. |..|+. .++|... .|. +++|.... +.|.|++||++.
T Consensus 18 C~n~~g~y~C~C~~Gy~~~~~~g~~C~d----------ideC~~~~~~C~-----~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 18 CVNTPGDFECKCDEGYESGFMMMKNCMD----------IDECQRDPLLCR-----GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp EEEETTEEEECCCSSEEECTTTSSSEEE----------CCHHHHCSSTTT-----TSEEEEETTEEEEESCTTSCCC
T ss_pred EECCCCCEEeeCCCCcCccCCCCCccCC----------cccccCCCCcCC-----CCEeEcCCCCEEEECcCCcccC
Confidence 7554 34788999887 444532 2344322 232 24565433 468888888763
No 71
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.34 E-value=0.0033 Score=38.78 Aligned_cols=34 Identities=26% Similarity=0.613 Sum_probs=26.9
Q ss_pred CCCcCCCCCCCCccCCCCCCCcccC-------CCceeecCCCCccCCCcc
Q psy15475 63 GDCEPCQCYIPGTLETETFTPVCDQ-------LTGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 63 ~~C~~c~C~~~g~~~~~~~~~~C~~-------~~g~C~C~~g~~G~~C~~ 105 (204)
++|.+.+|.++|+ |.. ....|.|++||+|.+|+.
T Consensus 7 ~~C~~~pC~ngG~---------C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 7 AEKEKTFCVNGGE---------CFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp CHHHHTTSCTTCE---------EEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CCCCCCcCCCCcE---------EecCCccCCCCCEEEECCCCCcCCccCc
Confidence 3577778999888 853 245899999999999974
No 72
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.18 E-value=0.014 Score=43.94 Aligned_cols=37 Identities=24% Similarity=0.609 Sum_probs=30.0
Q ss_pred CCCccCCCCCCCCCCCcccCCCCeeecCCCCccCCCCC
Q psy15475 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 117 ~~C~~c~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~ 154 (204)
+.|..-.|.+...++|.|.. .++|.|++||+|..|+.
T Consensus 144 K~C~~~~C~~~C~ngG~Cv~-P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 144 KTCQQAECPGGCRNGGFCNE-RRICECPDGFHGPHCEG 180 (188)
T ss_dssp EEECCCCCTTCCCTTCEECT-TSCEECCTTCBTTTTCB
T ss_pred ccccCCccCCCCCCCCEeCC-CCcccCcCCCCCCCCcC
Confidence 34655567777778899986 88999999999999985
No 73
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.05 E-value=0.033 Score=32.93 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=23.7
Q ss_pred ecccccCC---CCCCCCCcc--CCC--CccccCCCCcCCCCCCC
Q psy15475 12 DILLCVGP---PSDILKSVA--GTT--GDCLKCIYNTGGPQCDT 48 (204)
Q Consensus 12 ~~~~c~~~---~~~~~~~C~--~~~--g~C~~C~~~~~G~~C~~ 48 (204)
+|..|... ||.++++|. ... ..|. |+.+|+|.+|+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~-C~~G~~G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCN-CVIGYSGDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEE-CCTTCCSSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEE-CCCCCcCCcCCc
Confidence 45567665 899998986 322 2474 777777776654
No 74
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=94.85 E-value=0.021 Score=32.52 Aligned_cols=25 Identities=24% Similarity=0.428 Sum_probs=18.5
Q ss_pred CCCccc--C--CCCeeecCCCCccCCCCC
Q psy15475 130 LNRTCD--P--ITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 130 ~~~~C~--~--~~g~C~C~~g~~G~~C~~ 154 (204)
++++|. . ....|.|++||+|.+|+.
T Consensus 13 ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 13 NGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp SSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 456774 2 245799999999999863
No 75
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=94.69 E-value=0.0057 Score=37.63 Aligned_cols=35 Identities=20% Similarity=0.437 Sum_probs=27.3
Q ss_pred CCCCcCCCCCCC--CccCCCCCCCcccCC--CceeecCCCCc-cCCCcc
Q psy15475 62 KGDCEPCQCYIP--GTLETETFTPVCDQL--TGQCSCKPHVV-GTNCDQ 105 (204)
Q Consensus 62 ~~~C~~c~C~~~--g~~~~~~~~~~C~~~--~g~C~C~~g~~-G~~C~~ 105 (204)
+++|.+.||.++ ++ |.+. .+.|.|++||+ |.+|+.
T Consensus 11 ~d~C~snPC~nga~gt---------C~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGT---------CKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CCHHHHCSSCSSSCCE---------EEECSSEEEEECCTTEEEEECSSS
T ss_pred CCcCcCCCCcCCCccc---------cccCCCceEeECCCCCccCCCCCC
Confidence 356888899887 67 8654 35899999999 988863
No 76
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=94.57 E-value=0.0088 Score=39.14 Aligned_cols=46 Identities=24% Similarity=0.553 Sum_probs=25.0
Q ss_pred CCCCCCCCCCC-----CCCCCCCCCCCcCCC--CCCCCccCCCCCCCcccCCC--ceeecCCCCccC
Q psy15475 44 PQCDTCLPGYF-----GDALALPKGDCEPCQ--CYIPGTLETETFTPVCDQLT--GQCSCKPHVVGT 101 (204)
Q Consensus 44 ~~C~~C~~g~~-----g~~c~~~~~~C~~c~--C~~~g~~~~~~~~~~C~~~~--g~C~C~~g~~G~ 101 (204)
+.| .|++||. |..|. ++++|...+ |. +++ |.+.. ..|.|++||.+.
T Consensus 25 y~C-~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~---------C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 25 FEC-KCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGV---------CHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp EEE-CCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSE---------EEEETTEEEEESCTTSCCC
T ss_pred EEe-eCCCCcCccCCCCCccC-CcccccCCCCcCC-CCE---------eEcCCCCEEEECcCCcccC
Confidence 344 4555554 44453 345676444 54 344 75543 478887777653
No 77
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=93.22 E-value=0.019 Score=33.09 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=21.1
Q ss_pred ecccccC---CCCCCCCCccCCC----CccccCCCCcCCCCCC
Q psy15475 12 DILLCVG---PPSDILKSVAGTT----GDCLKCIYNTGGPQCD 47 (204)
Q Consensus 12 ~~~~c~~---~~~~~~~~C~~~~----g~C~~C~~~~~G~~C~ 47 (204)
+|..|.. .||.+ ++|.... ..|. |+++|+|.+|+
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~-C~~GytG~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCR-CEVGYTGVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEE-ECTTCSSTTSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEE-CCCCCccCCCC
Confidence 4555666 68887 6885422 2474 77777776664
No 78
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=93.18 E-value=0.042 Score=32.59 Aligned_cols=33 Identities=21% Similarity=0.571 Sum_probs=24.7
Q ss_pred CCCCCCCCccCCCCCCCccc--CC--CceeecCCCCccCCCcccCC
Q psy15475 67 PCQCYIPGTLETETFTPVCD--QL--TGQCSCKPHVVGTNCDQCEV 108 (204)
Q Consensus 67 ~c~C~~~g~~~~~~~~~~C~--~~--~g~C~C~~g~~G~~C~~C~~ 108 (204)
..+|.++|+ |. .. ...|.|+++|+|.+|+.=..
T Consensus 11 ~~pC~nGG~---------C~~~~~~~~~~C~C~~GytG~~Ce~~~~ 47 (53)
T 1nql_B 11 DGYCLHDGV---------CMYIEALDKYACNCVVGYIGERCQYRDL 47 (53)
T ss_dssp CCEECTTCE---------EEEETTTTEEEEEECTTEESTTSCEECS
T ss_pred CCCCCCCeE---------EeeecCCCCEEEecCCCCcCCCCCcCCc
Confidence 456888888 85 22 35899999999999986433
No 79
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=93.03 E-value=0.036 Score=37.88 Aligned_cols=50 Identities=22% Similarity=0.622 Sum_probs=14.1
Q ss_pred ccCC--CceeecCCCCcc---CCCcccCCCccccCCCCCCcc-CCCCCCCCCCCcccCC--CCeeecCCCCccC
Q psy15475 85 CDQL--TGQCSCKPHVVG---TNCDQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPI--TGQCLCRPGVTGT 150 (204)
Q Consensus 85 C~~~--~g~C~C~~g~~G---~~C~~C~~G~~g~~~~~~C~~-c~C~~~g~~~~~C~~~--~g~C~C~~g~~G~ 150 (204)
|.+. .+.|.|++||.| ..|+. .++|.. .+|. ++|... .+.|.|++||.+.
T Consensus 43 C~n~~g~y~C~C~~Gy~g~~g~~C~d----------ideC~~~~~C~------~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 43 CNDLKIGYECLCPDGFQLVAQRRCED----------IDECQDPDTCS------QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp EECCSBSCEEECCTTCEEETTTEEEC------------------------------------------------
T ss_pred eEeCCCCeEEECCCCccccCCCcccc----------ccccCCCCCcC------CeeecCCCCEEEECCCCceEC
Confidence 6543 458999999987 45541 234431 2232 344432 3467788777653
No 80
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=92.94 E-value=0.021 Score=39.11 Aligned_cols=51 Identities=22% Similarity=0.443 Sum_probs=15.1
Q ss_pred CCCCcCCCCCCCCCCCCCC---CCCCCCCCCCcC-CCCCCCCccCCCCCCCcccCC--CceeecCCCCcc
Q psy15475 37 CIYNTGGPQCDTCLPGYFG---DALALPKGDCEP-CQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVG 100 (204)
Q Consensus 37 C~~~~~G~~C~~C~~g~~g---~~c~~~~~~C~~-c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G 100 (204)
|.....++.| .|++||.+ ..|+ ++++|.. .+|. ++ |.+. ...|.|++||.+
T Consensus 43 C~n~~g~y~C-~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~---------C~n~~gsy~C~C~~Gy~~ 99 (107)
T 2w2n_E 43 CNDLKIGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCS--QL---------CVNLEGGYKCQCEEGFQL 99 (107)
T ss_dssp EECCSBSCEE-ECCTTCEEETTTEEE-C------------------------------------------
T ss_pred eEeCCCCeEE-ECCCCccccCCCccc-cccccCCCCCcC--Ce---------eecCCCCEEEECCCCceE
Confidence 4444556777 78888877 5565 4556752 4453 23 6543 346777766665
No 81
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=92.46 E-value=0.042 Score=33.66 Aligned_cols=33 Identities=12% Similarity=-0.038 Sum_probs=22.7
Q ss_pred ccccCCCCCCCCCccC-------CCCccccCCCCcCCCCCC
Q psy15475 14 LLCVGPPSDILKSVAG-------TTGDCLKCIYNTGGPQCD 47 (204)
Q Consensus 14 ~~c~~~~~~~~~~C~~-------~~g~C~~C~~~~~G~~C~ 47 (204)
..|...||.++++|.. ....|. |+++|+|.+|+
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~-C~~Gf~G~~Ce 46 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCK-CQPGFTGARCT 46 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEE-CCTTEESTTSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEE-CCCCCcCCccC
Confidence 3566789999999964 122475 77777777774
No 82
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=92.14 E-value=0.078 Score=46.54 Aligned_cols=56 Identities=21% Similarity=0.566 Sum_probs=39.1
Q ss_pred CCceeecCCCCc--cCCCcccCCCccccCCC-CCCccCCCCCCCCCCCcccCCCCeeecCCCCc
Q psy15475 88 LTGQCSCKPHVV--GTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148 (204)
Q Consensus 88 ~~g~C~C~~g~~--G~~C~~C~~G~~g~~~~-~~C~~c~C~~~g~~~~~C~~~~g~C~C~~g~~ 148 (204)
-.|+|.|.+||. +..|+.|++|||....+ ..|.+|+-+.. .-+.....|.|..+|.
T Consensus 261 p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~-----s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 261 PIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTL-----PSPEGATSCECEEGFF 319 (536)
T ss_dssp CBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEE-----CCCTTCSSCEECTTCB
T ss_pred ccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCC-----CCCCCccEEEEecccc
Confidence 368999999997 67799999999975443 45777654321 1122345788888875
No 83
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=91.42 E-value=0.053 Score=32.78 Aligned_cols=28 Identities=21% Similarity=0.541 Sum_probs=22.2
Q ss_pred CCCCCCccCCCCCCCcccC----C--CceeecCCCCccCCCcc
Q psy15475 69 QCYIPGTLETETFTPVCDQ----L--TGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 69 ~C~~~g~~~~~~~~~~C~~----~--~g~C~C~~g~~G~~C~~ 105 (204)
+|.++|+ |.. . ...|.|++||+|.+||.
T Consensus 15 pC~NGGt---------C~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAH---------CFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCE---------EEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCE---------EeCCccCCCCCEEeECCCCCccCCCcc
Confidence 6888888 852 1 24799999999999985
No 84
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=91.38 E-value=0.036 Score=33.95 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=22.9
Q ss_pred ecccccCCCCCCC--CCccCCCC--ccccCCCCcC-CCCC
Q psy15475 12 DILLCVGPPSDIL--KSVAGTTG--DCLKCIYNTG-GPQC 46 (204)
Q Consensus 12 ~~~~c~~~~~~~~--~~C~~~~g--~C~~C~~~~~-G~~C 46 (204)
++..|...||.++ ++|....+ .|. |+++|. |..|
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~-C~~Gy~~G~~C 48 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICR-CNQGYRISLDG 48 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEE-CCTTEEEEECS
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeE-CCCCCccCCCC
Confidence 4456777899888 78865443 374 777776 6665
No 85
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=91.21 E-value=0.078 Score=46.53 Aligned_cols=59 Identities=22% Similarity=0.459 Sum_probs=41.2
Q ss_pred CcccCCCCeeecCCCCc--cCCCCCCCCCcccCCC--CCCccccCCCCCCCCCCCC-CCCcccCCCCCC
Q psy15475 132 RTCDPITGQCLCRPGVT--GTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCD-PSGQCPGVFMNR 195 (204)
Q Consensus 132 ~~C~~~~g~C~C~~g~~--G~~C~~C~~g~~g~~~--~~c~~C~C~~~g~~~~~C~-~~g~C~c~~~~~ 195 (204)
|.+....|+|.|.+||. +..|+.|++|||.... ..|.+|+-... .-+ -...|.|..+|.
T Consensus 256 G~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~-----s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 256 GEWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTL-----PSPEGATSCECEEGFF 319 (536)
T ss_dssp SCBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEE-----CCCTTCSSCEECTTCB
T ss_pred CCEecccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCC-----CCCCCccEEEEecccc
Confidence 33444468999999997 6779999999998654 34788765431 222 356788887765
No 86
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=90.69 E-value=0.086 Score=31.18 Aligned_cols=25 Identities=28% Similarity=0.639 Sum_probs=18.9
Q ss_pred CCCccc--CC--CCeeecCCCCccCCCCC
Q psy15475 130 LNRTCD--PI--TGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 130 ~~~~C~--~~--~g~C~C~~g~~G~~C~~ 154 (204)
++++|. .. ...|.|++||+|.+|+.
T Consensus 16 nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 16 HDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp TTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 456775 22 34799999999999985
No 87
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.84 E-value=0.078 Score=44.16 Aligned_cols=50 Identities=28% Similarity=0.605 Sum_probs=15.6
Q ss_pred CCCCCCCCCCCC----CCCCCCCCCCCc-CCCCCCCCccCCCCCCCcccCC--CceeecCCCCc----cCCCcc
Q psy15475 43 GPQCDTCLPGYF----GDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVV----GTNCDQ 105 (204)
Q Consensus 43 G~~C~~C~~g~~----g~~c~~~~~~C~-~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~----G~~C~~ 105 (204)
++.| .|++||. |..| .++++|. ..+|.+. |.+. ...|.|.+||. |..|+.
T Consensus 23 ~~~C-~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~-----------C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 23 AVQC-TCHTGYRLTEDGRTC-QDVNECAEEGYCSQG-----------CTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp -------------------------------CCTTE-----------EC-----CCEECCTTEEECTTSSCEEE
T ss_pred CcEe-ECCCCceECCCCCcc-CccceeCCcCcccCc-----------CCCCCCCCeEEECCCceEcCCCCeECC
Confidence 3667 7777876 6667 3455674 3445431 5443 45899999998 777763
No 88
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=89.48 E-value=0.093 Score=31.67 Aligned_cols=30 Identities=30% Similarity=0.505 Sum_probs=20.6
Q ss_pred CCCcccC----C--CCeeecCCCCccCCCCC-CCCCc
Q psy15475 130 LNRTCDP----I--TGQCLCRPGVTGTRCEL-CQPNH 159 (204)
Q Consensus 130 ~~~~C~~----~--~g~C~C~~g~~G~~C~~-C~~g~ 159 (204)
++++|.. . ...|.|++||+|.+||. -+++.
T Consensus 18 NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~~ 54 (58)
T 3ltf_D 18 NDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDNT 54 (58)
T ss_dssp SSCEEEEEEETTEEEEEEEECTTEESSSSCEECCCCC
T ss_pred CCCEEeCCccCCCCCEEeECCCCCccCCCcccCCCCc
Confidence 4567752 1 23799999999999985 34443
No 89
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=88.60 E-value=0.14 Score=42.19 Aligned_cols=38 Identities=26% Similarity=0.860 Sum_probs=30.2
Q ss_pred CCCCCCCCccCCCCCCCcccCCCc--eeecCCCCccCCCcccCCCccc
Q psy15475 67 PCQCYIPGTLETETFTPVCDQLTG--QCSCKPHVVGTNCDQCEVGHYN 112 (204)
Q Consensus 67 ~c~C~~~g~~~~~~~~~~C~~~~g--~C~C~~g~~G~~C~~C~~G~~g 112 (204)
+|.|++++. . |....+ .|.|.+++.|.+|++|.++|++
T Consensus 269 ~C~CnGHA~------~--C~~~~g~~~C~C~HnT~G~~Ce~C~p~y~~ 308 (338)
T 3tbd_A 269 RCKCNLHAN------L--CSMREGSLQCECEHNTTGPDCGKCKKNFRT 308 (338)
T ss_dssp EECCTTBCS------C--EEEETTEEEECCCTTEESTTSCEECTTCBS
T ss_pred cccccCCcC------c--cCCCCCCceecCCCCCCCCCCcccCccccC
Confidence 467777765 2 754444 6999999999999999999985
No 90
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=88.29 E-value=0.11 Score=30.47 Aligned_cols=27 Identities=15% Similarity=0.181 Sum_probs=18.8
Q ss_pred CCCCCCCccCC----C--CccccCCCCcCCCCCC
Q psy15475 20 PSDILKSVAGT----T--GDCLKCIYNTGGPQCD 47 (204)
Q Consensus 20 ~~~~~~~C~~~----~--g~C~~C~~~~~G~~C~ 47 (204)
||.++++|... . ..|. |+.+|+|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~-C~~Gf~G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCE-CAIGFMGQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEE-CCTTEESTTSC
T ss_pred cCCCCCEEecCccCCCCCEEEE-CCCCCcCCCCc
Confidence 77888888641 1 2585 88888887775
No 91
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=87.44 E-value=0.29 Score=36.81 Aligned_cols=25 Identities=12% Similarity=0.044 Sum_probs=21.5
Q ss_pred CCCCCCCCCcccCCCCCCcccCCcc
Q psy15475 178 NSLQCDPSGQCPGVFMNRAEMSSDD 202 (204)
Q Consensus 178 ~~~~C~~~g~C~c~~~~~g~~~~~~ 202 (204)
.++.|...++|.|.+||+|.+|+..
T Consensus 157 ngG~Cv~P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 157 NGGFCNERRICECPDGFHGPHCEGT 181 (188)
T ss_dssp TTCEECTTSCEECCTTCBTTTTCBC
T ss_pred CCCEeCCCCcccCcCCCCCCCCcCC
Confidence 3558998999999999999999863
No 92
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=87.13 E-value=0.26 Score=43.42 Aligned_cols=35 Identities=29% Similarity=0.578 Sum_probs=29.3
Q ss_pred CCCCcCCCCCCCCccCCCCCCCcccC-C--CceeecC-CCCccCCCcc
Q psy15475 62 KGDCEPCQCYIPGTLETETFTPVCDQ-L--TGQCSCK-PHVVGTNCDQ 105 (204)
Q Consensus 62 ~~~C~~c~C~~~g~~~~~~~~~~C~~-~--~g~C~C~-~g~~G~~C~~ 105 (204)
+++|.+.||.++|+ |.. . ...|.|. +||.|.+|+.
T Consensus 2 ~d~C~~~PC~ngG~---------C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGI---------CVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCE---------EEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCC---------cCCCCCCceEeeCCCCCcCCCCCCC
Confidence 45788999999998 865 3 4589999 9999999984
No 93
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=86.68 E-value=0.56 Score=39.13 Aligned_cols=50 Identities=22% Similarity=0.644 Sum_probs=30.0
Q ss_pred ccCC--CceeecCCCCc---cCCCcccCCCccccCCCCCCc-cCCCCCCCCCCCcccCC--CCeeecCCCCccC
Q psy15475 85 CDQL--TGQCSCKPHVV---GTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPI--TGQCLCRPGVTGT 150 (204)
Q Consensus 85 C~~~--~g~C~C~~g~~---G~~C~~C~~G~~g~~~~~~C~-~c~C~~~g~~~~~C~~~--~g~C~C~~g~~G~ 150 (204)
|.+. ...|.|++||. |..|+. .++|. +..|. ..|... .+.|.|.+||.+.
T Consensus 14 C~~~~~~y~C~C~~G~~~~~~~~C~d----------ideC~~~~~C~------~~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 14 CNDLKIGYECLCPDGFQLVAQRRCED----------IDECQDPDTCS------QLCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp EEECSSSEEEECCTTEEECSSSCEEE----------CCCCSTTSSCS------SCCBCCSSSCBCCCCTTCCCC
T ss_pred eECCCCCeEEECCCCCCcCCCCcccC----------chhhhccCCCC------CccCCCccceeeecccccccc
Confidence 7543 45899999998 666642 33443 22333 245432 3578899988764
No 94
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=85.98 E-value=0.2 Score=41.95 Aligned_cols=47 Identities=23% Similarity=0.536 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCCCCc-CCCCCCCCccCCCCCCCcccCC--CceeecCCCCccC
Q psy15475 42 GGPQCDTCLPGYF---GDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGT 101 (204)
Q Consensus 42 ~G~~C~~C~~g~~---g~~c~~~~~~C~-~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~ 101 (204)
.++.| .|++||. |..|+ ++++|. +.+|.+ . |.+. ...|.|.+||.+.
T Consensus 19 ~~y~C-~C~~G~~~~~~~~C~-dideC~~~~~C~~--~---------C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 19 IGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCSQ--L---------CVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp SSEEE-ECCTTEEECSSSCEE-ECCCCSTTSSCSS--C---------CBCCSSSCBCCCCTTCCCC
T ss_pred CCeEE-ECCCCCCcCCCCccc-CchhhhccCCCCC--c---------cCCCccceeeecccccccc
Confidence 34445 5666665 55554 345665 234543 2 6543 3578888888764
No 95
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=84.69 E-value=0.38 Score=42.60 Aligned_cols=34 Identities=26% Similarity=0.633 Sum_probs=28.5
Q ss_pred CCCcCCCCCCCCccCCCCCCCcccC---CCceeecC-CCCccCCCcc
Q psy15475 63 GDCEPCQCYIPGTLETETFTPVCDQ---LTGQCSCK-PHVVGTNCDQ 105 (204)
Q Consensus 63 ~~C~~c~C~~~g~~~~~~~~~~C~~---~~g~C~C~-~g~~G~~C~~ 105 (204)
+.|.+.||.++|+ |.. ....|.|+ +||+|.+|+.
T Consensus 2 d~C~s~PC~ngG~---------C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQNRGE---------CMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CTTTTCCCCTTCE---------EEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCE---------eeCCCCCCeEEecCCCCccCCCCCC
Confidence 4688889999998 863 24689999 9999999993
No 96
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=84.23 E-value=0.45 Score=33.14 Aligned_cols=29 Identities=31% Similarity=0.780 Sum_probs=22.7
Q ss_pred CCCCCCCccCCCCCCCcccCC----Cc-eeecCCCCccCCCcc
Q psy15475 68 CQCYIPGTLETETFTPVCDQL----TG-QCSCKPHVVGTNCDQ 105 (204)
Q Consensus 68 c~C~~~g~~~~~~~~~~C~~~----~g-~C~C~~g~~G~~C~~ 105 (204)
++|.++++ |.+. .. .|.|+++|+|.+|++
T Consensus 1 ~pC~nggt---------C~~~~~~~~~~~C~Cp~g~~G~~Ce~ 34 (122)
T 2fd6_A 1 CDCLNGGT---------CVSNKYFSNIHWCNCPKKFGGQHCEI 34 (122)
T ss_dssp CCCCSSCE---------EEECTTTTTCEEEECCTTEESTTSCE
T ss_pred CCCCCcCC---------cCCCcccCCCCCccCCCCCCCccccc
Confidence 36888888 7542 23 799999999999986
No 97
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=83.55 E-value=0.29 Score=40.59 Aligned_cols=48 Identities=27% Similarity=0.701 Sum_probs=14.2
Q ss_pred ceeecCCCCc----cCCCcccCCCccccCCCCCCc-cCCCCCCCCCCCcccCC--CCeeecCCCCc----cCCCC
Q psy15475 90 GQCSCKPHVV----GTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPI--TGQCLCRPGVT----GTRCE 153 (204)
Q Consensus 90 g~C~C~~g~~----G~~C~~C~~G~~g~~~~~~C~-~c~C~~~g~~~~~C~~~--~g~C~C~~g~~----G~~C~ 153 (204)
..|.|++||. |..|+. .++|. ...|.. .|... ...|.|++||. |..|+
T Consensus 24 ~~C~C~~G~~l~~~~~~C~d----------~~eC~~~~~C~~------~C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 24 VQCTCHTGYRLTEDGRTCQD----------VNECAEEGYCSQ------GCTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp --------------------------------------CCTT------EEC-----CCEECCTTEEECTTSSCEE
T ss_pred cEeECCCCceECCCCCccCc----------cceeCCcCcccC------cCCCCCCCCeEEECCCceEcCCCCeEC
Confidence 4788888887 666642 23342 223332 25432 35799999998 66664
No 98
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=83.30 E-value=0.48 Score=27.61 Aligned_cols=16 Identities=44% Similarity=1.136 Sum_probs=13.9
Q ss_pred CeeecCCCCccCCCCC
Q psy15475 139 GQCLCRPGVTGTRCEL 154 (204)
Q Consensus 139 g~C~C~~g~~G~~C~~ 154 (204)
..|.|.+||+|.+|+.
T Consensus 30 ~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 30 PACVCHSGYVGARCEH 45 (50)
T ss_pred eEEECCCCCcccCCCc
Confidence 4799999999999974
No 99
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=82.85 E-value=0.42 Score=27.83 Aligned_cols=15 Identities=47% Similarity=1.196 Sum_probs=13.5
Q ss_pred eeecCCCCccCCCCC
Q psy15475 140 QCLCRPGVTGTRCEL 154 (204)
Q Consensus 140 ~C~C~~g~~G~~C~~ 154 (204)
.|.|++||+|.+||.
T Consensus 31 ~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 31 SCVCDEGYIGARCER 45 (50)
T ss_dssp EECCCTTEETTTTCE
T ss_pred EEECCCCcccCCCCe
Confidence 599999999999974
No 100
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=82.25 E-value=0.65 Score=27.01 Aligned_cols=15 Identities=33% Similarity=0.826 Sum_probs=13.3
Q ss_pred eeecCCCCccCCCCC
Q psy15475 140 QCLCRPGVTGTRCEL 154 (204)
Q Consensus 140 ~C~C~~g~~G~~C~~ 154 (204)
.|.|++||+|.+|+.
T Consensus 35 ~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 35 TCKCQQEYFGERCGE 49 (50)
T ss_dssp EEECCSSCCSSSCCC
T ss_pred eEECCCCcccccccc
Confidence 599999999999974
No 101
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=81.87 E-value=0.82 Score=36.62 Aligned_cols=17 Identities=35% Similarity=0.782 Sum_probs=9.9
Q ss_pred CccccCCCCcCCCCCCCCC
Q psy15475 32 GDCLKCIYNTGGPQCDTCL 50 (204)
Q Consensus 32 g~C~~C~~~~~G~~C~~C~ 50 (204)
|.|. |.++|.|..| .|.
T Consensus 207 G~C~-C~~g~~G~~C-eC~ 223 (280)
T 2p26_A 207 GICR-CDTGYIGKNC-ECQ 223 (280)
T ss_dssp TEEE-ECTTEESTTS-CEE
T ss_pred Ccee-CCCCCcCCcc-eec
Confidence 3453 6666766666 343
No 102
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=80.92 E-value=0.69 Score=33.12 Aligned_cols=63 Identities=29% Similarity=0.916 Sum_probs=32.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcCCC-CCCC-CccCCCCCCCcccC-CCceeecCCCCc-------cCCCcccCCCccc
Q psy15475 44 PQCDTCLPGYFGDALALPKGDCEPCQ-CYIP-GTLETETFTPVCDQ-LTGQCSCKPHVV-------GTNCDQCEVGHYN 112 (204)
Q Consensus 44 ~~C~~C~~g~~g~~c~~~~~~C~~c~-C~~~-g~~~~~~~~~~C~~-~~g~C~C~~g~~-------G~~C~~C~~G~~g 112 (204)
..|..|++|+|-..... ..|+++. |... +...... |.. ....|.|++||. ...|+.|++|+|-
T Consensus 38 t~C~~C~~gty~~~~~~--~~C~~C~~C~~~~g~~~~~~----Ct~t~dt~C~C~~G~y~~~g~~~~~~C~~C~~Gtfs 110 (146)
T 2hey_R 38 TVCRPCGPGFYNDVVSS--KPCKPCTWCNLRSGSERKQL----CTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFS 110 (146)
T ss_dssp CEEEECCTTEECCSCBS--SCCEECCCCCGGGTEEEEEC----CBTTBCCEEEECTTEEESCSSSTTSSEEECCTTEEC
T ss_pred CCcccCCCCCEECCCCC--CcCcccCCCCCCCCceEecc----CccCCCccccCCCCeeeCCCcccCcccccCCCCccc
Confidence 45666888877655432 2466554 4432 1111111 432 234677777753 2346667777663
No 103
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=78.91 E-value=0.53 Score=33.88 Aligned_cols=32 Identities=31% Similarity=0.816 Sum_probs=22.4
Q ss_pred CcCCCCCCCCccCCCCCCCcccCC--CceeecCCCCccCCCcc
Q psy15475 65 CEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 65 C~~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G~~C~~ 105 (204)
|.+.+|.+.++ |... ...|.|++||.|.+|+.
T Consensus 122 c~~~~C~~~g~---------C~~~~~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 122 CQDMSCSKQGE---------CLETIGNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp CCTTGGGGSEE---------EEECSSSEEEEECTTEESTTSCE
T ss_pred CcCCCCCCCCE---------EecCCCCceEeCCCCCcCccccc
Confidence 44555665555 7543 45899999999999875
No 104
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=78.68 E-value=5.1 Score=36.01 Aligned_cols=51 Identities=24% Similarity=0.514 Sum_probs=33.3
Q ss_pred CCCCcCCCCCCCCCCCCC---CCCCCCCCCCCc-CCCCCCCCccCCCCCCCcccCC--CceeecCCCCcc
Q psy15475 37 CIYNTGGPQCDTCLPGYF---GDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVG 100 (204)
Q Consensus 37 C~~~~~G~~C~~C~~g~~---g~~c~~~~~~C~-~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G 100 (204)
|.....++.| .|++||. +..|+ ++++|. +.+|.+ . |.+. .+.|.|.+||.+
T Consensus 308 C~~~~~~~~C-~C~~G~~~~~~~~C~-dideC~~~~~C~~--~---------C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 308 CNDLKIGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCSQ--L---------CVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp CCCCTTCCCC-CCCSSSCCCSSSCCC-CCCCCSSSSSCTT--T---------CCBCSSCBCCCCCSSCBC
T ss_pred cccCCCCcEE-eCCCCeEcCCCCccc-CccccCCCCcccc--c---------cccCCCCeeeeeeccccc
Confidence 5555567778 8999998 56665 455675 334532 2 6543 457899999885
No 105
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=78.41 E-value=0.9 Score=36.38 Aligned_cols=16 Identities=44% Similarity=1.078 Sum_probs=14.1
Q ss_pred CCeeecCCCCccCCCC
Q psy15475 138 TGQCLCRPGVTGTRCE 153 (204)
Q Consensus 138 ~g~C~C~~g~~G~~C~ 153 (204)
-|.|.|.+||.|..|+
T Consensus 206 CG~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 206 CGICRCDTGYIGKNCE 221 (280)
T ss_dssp TTEEEECTTEESTTSC
T ss_pred CCceeCCCCCcCCcce
Confidence 4679999999999996
No 106
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=77.88 E-value=1.1 Score=32.10 Aligned_cols=30 Identities=30% Similarity=0.744 Sum_probs=23.5
Q ss_pred CCCCCCCCccCCCCCCCcccCC----Cc-eeecCCCCccCCCcc
Q psy15475 67 PCQCYIPGTLETETFTPVCDQL----TG-QCSCKPHVVGTNCDQ 105 (204)
Q Consensus 67 ~c~C~~~g~~~~~~~~~~C~~~----~g-~C~C~~g~~G~~C~~ 105 (204)
.++|.++|+ |... .. .|.|+++|.|.+|++
T Consensus 12 ~cpC~NGGt---------C~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 12 NCDCLNGGT---------CVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCCCTTCE---------EEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCCC---------cCCCccccCCccccCCCCCCCCceec
Confidence 458999998 7432 22 799999999999985
No 107
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=76.17 E-value=0.49 Score=42.75 Aligned_cols=23 Identities=26% Similarity=0.655 Sum_probs=20.0
Q ss_pred CCCcccCCCCeeecCCCCccCCCCC
Q psy15475 130 LNRTCDPITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 130 ~~~~C~~~~g~C~C~~g~~G~~C~~ 154 (204)
.++.|. .|+|.|.+||.|..|+.
T Consensus 543 ghG~C~--~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 543 GHGRCV--QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp GSEEEE--TTEEEECTTEESTTSCE
T ss_pred CCcEEC--CCCEeeCCCccCCCcCc
Confidence 578897 58999999999999973
No 108
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=75.15 E-value=3.5 Score=30.40 Aligned_cols=17 Identities=29% Similarity=0.571 Sum_probs=5.0
Q ss_pred CccCCCCCCCCCcccCC
Q psy15475 147 VTGTRCELCQPNHYGFS 163 (204)
Q Consensus 147 ~~G~~C~~C~~g~~g~~ 163 (204)
.....|+.|++|+|...
T Consensus 118 ~~dt~C~~C~~Gtfs~~ 134 (177)
T 3qd6_R 118 VSDTICEPCPVGFFSNV 134 (177)
T ss_dssp SCCCCCCC---------
T ss_pred CCCCccccCCCCcccCC
Confidence 34467778888887653
No 109
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=71.42 E-value=1.8 Score=38.07 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=27.2
Q ss_pred ccccCCCCCCCCCccC-CCC--ccccCC-CCcCCCCCCC
Q psy15475 14 LLCVGPPSDILKSVAG-TTG--DCLKCI-YNTGGPQCDT 48 (204)
Q Consensus 14 ~~c~~~~~~~~~~C~~-~~g--~C~~C~-~~~~G~~C~~ 48 (204)
..|...||.++++|.. ..+ .|. |. .+|.|.+|+.
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~-C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCD-CTRTGYSGPNCTI 40 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEE-CTTSSEETTTTCE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEee-CCCCCcCCCCCCC
Confidence 4588899999999976 333 585 99 9999999973
No 110
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=70.09 E-value=1.8 Score=38.36 Aligned_cols=33 Identities=27% Similarity=0.592 Sum_probs=25.0
Q ss_pred CCccCCCCCCCCCCCcccC---CCCeeecC-CCCccCCCCC
Q psy15475 118 GCKSCDCDPVGSLNRTCDP---ITGQCLCR-PGVTGTRCEL 154 (204)
Q Consensus 118 ~C~~c~C~~~g~~~~~C~~---~~g~C~C~-~g~~G~~C~~ 154 (204)
.|.+.+|. ++++|.. ..+.|.|+ +||+|..|+.
T Consensus 3 ~C~s~PC~----ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 3 PCCSNPCQ----NRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp TTTTCCCC----TTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCC----CCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 46666676 4677863 34689999 9999999985
No 111
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=69.42 E-value=2.1 Score=29.60 Aligned_cols=25 Identities=28% Similarity=0.533 Sum_probs=18.2
Q ss_pred CCCcccCC----CC-eeecCCCCccCCCCC
Q psy15475 130 LNRTCDPI----TG-QCLCRPGVTGTRCEL 154 (204)
Q Consensus 130 ~~~~C~~~----~g-~C~C~~g~~G~~C~~ 154 (204)
++++|... .. .|.|+++|+|..|+.
T Consensus 5 nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~ 34 (122)
T 2fd6_A 5 NGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 34 (122)
T ss_dssp SSCEEEECTTTTTCEEEECCTTEESTTSCE
T ss_pred CcCCcCCCcccCCCCCccCCCCCCCccccc
Confidence 45667432 23 799999999999974
No 112
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=69.05 E-value=1.8 Score=27.73 Aligned_cols=16 Identities=44% Similarity=1.175 Sum_probs=13.7
Q ss_pred CeeecCCCCccCCCCC
Q psy15475 139 GQCLCRPGVTGTRCEL 154 (204)
Q Consensus 139 g~C~C~~g~~G~~C~~ 154 (204)
..|.|.+||+|.+|+.
T Consensus 62 ~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 62 PSCICHPGYHGERCHG 77 (79)
T ss_dssp CCEEECTTEESTTCCE
T ss_pred eEEEcCCCcccccccc
Confidence 3699999999999973
No 113
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=68.23 E-value=2 Score=30.60 Aligned_cols=26 Identities=19% Similarity=0.506 Sum_probs=14.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcCCC
Q psy15475 43 GPQCDTCLPGYFGDALALPKGDCEPCQ 69 (204)
Q Consensus 43 G~~C~~C~~g~~g~~c~~~~~~C~~c~ 69 (204)
...|..|++|+|-..+... ..|.++.
T Consensus 35 ~t~C~pC~~gty~~~~n~~-~~C~~C~ 60 (142)
T 2uwi_A 35 DTICGHCPSDTFTSIYNRS-PWCHSCR 60 (142)
T ss_dssp CCEEEECCTTEECCSSBCC-SSCEECC
T ss_pred CCccCcCCCCCCcccCCCC-CccCCCc
Confidence 4456678888766554321 2466544
No 114
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=66.03 E-value=19 Score=32.26 Aligned_cols=12 Identities=25% Similarity=0.556 Sum_probs=9.4
Q ss_pred CCeeecCCCCcc
Q psy15475 138 TGQCLCRPGVTG 149 (204)
Q Consensus 138 ~g~C~C~~g~~G 149 (204)
.+.|.|++||.+
T Consensus 353 ~y~C~C~~G~~~ 364 (699)
T 1n7d_A 353 GYKCQCEEGFQL 364 (699)
T ss_dssp CBCCCCCSSCBC
T ss_pred Ceeeeeeccccc
Confidence 457899999875
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=63.77 E-value=3.8 Score=29.28 Aligned_cols=32 Identities=28% Similarity=0.734 Sum_probs=22.5
Q ss_pred CcCCCCCCCCccCCCCCCCcccC--CCceeecCCCCccCCCcc
Q psy15475 65 CEPCQCYIPGTLETETFTPVCDQ--LTGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 65 C~~c~C~~~g~~~~~~~~~~C~~--~~g~C~C~~g~~G~~C~~ 105 (204)
|.+.+|.++++ |.. ..+.|.|.+||.|.+|+.
T Consensus 122 ~~~~~C~~~g~---------C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 122 CQPWSCSGHGE---------CVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp CCTTSSCSSEE---------EEEETTEEEEEECTTCBSSSSCB
T ss_pred CCCCcCCCCCe---------ecccCCCceeeeCCCcccccccc
Confidence 44455666665 753 346899999999999875
No 116
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=63.12 E-value=1.7 Score=31.10 Aligned_cols=24 Identities=29% Similarity=0.928 Sum_probs=17.4
Q ss_pred CCCCcCCCCCCCCCCCCCCCCCCCC
Q psy15475 37 CIYNTGGPQCDTCLPGYFGDALALP 61 (204)
Q Consensus 37 C~~~~~G~~C~~C~~g~~g~~c~~~ 61 (204)
|..+..++.| .|++||.|..|++.
T Consensus 133 C~~~~~~~~c-~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 133 CLETIGNYTC-SCYPGFYGPECEYV 156 (162)
T ss_dssp EEECSSSEEE-EECTTEESTTSCEE
T ss_pred EecCCCCceE-eCCCCCcCcccccC
Confidence 3355666778 88999999888743
No 117
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=61.97 E-value=4 Score=29.13 Aligned_cols=24 Identities=25% Similarity=0.650 Sum_probs=18.1
Q ss_pred CCcccC--CCCeeecCCCCccCCCCC
Q psy15475 131 NRTCDP--ITGQCLCRPGVTGTRCEL 154 (204)
Q Consensus 131 ~~~C~~--~~g~C~C~~g~~G~~C~~ 154 (204)
+++|.. ..+.|.|.+||.|..|+.
T Consensus 130 ~g~C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 130 HGECVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp SEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred CCeecccCCCceeeeCCCcccccccc
Confidence 456653 345799999999999975
No 118
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=59.38 E-value=0.66 Score=41.91 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=28.8
Q ss_pred CCCCcccCCCC---CCccccCCCCCCCCCCCCCCCcccCCCCCCcccCCc
Q psy15475 155 CQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSD 201 (204)
Q Consensus 155 C~~g~~g~~~~---~c~~C~C~~~g~~~~~C~~~g~C~c~~~~~g~~~~~ 201 (204)
|.++|.|.++. .|. ..|.+.| +|. .|+|+|..||+|+.|..
T Consensus 522 C~~gw~g~dc~i~~~Cp-~~C~ghG----~C~-~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 522 KQQTWAIDNVYIGDGCL-DMCSGHG----RCV-QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp TTCCEEEEEEEEESCSS-GGGGGSE----EEE-TTEEEECTTEESTTSCE
T ss_pred cCCCcccccccccCCCC-cccCCCc----EEC-CCCEeeCCCccCCCcCc
Confidence 66666665543 122 2566544 888 79999999999999874
No 119
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=59.35 E-value=5.3 Score=28.52 Aligned_cols=29 Identities=34% Similarity=0.799 Sum_probs=20.3
Q ss_pred CCCCCCCCCCCcccCC---CC--eeecCCCCccCCCCC
Q psy15475 122 CDCDPVGSLNRTCDPI---TG--QCLCRPGVTGTRCEL 154 (204)
Q Consensus 122 c~C~~~g~~~~~C~~~---~g--~C~C~~g~~G~~C~~ 154 (204)
|+|. ++++|... .. .|.|++||.|..|+.
T Consensus 13 cpC~----NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 13 CDCL----NGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCC----TTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCC----CCCCcCCCccccCCccccCCCCCCCCceec
Confidence 4555 46677432 22 699999999999974
No 120
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=58.34 E-value=7.4 Score=32.32 Aligned_cols=39 Identities=26% Similarity=0.531 Sum_probs=29.0
Q ss_pred CCCCCCCCcCCCCCCCCccCCCCCCCcccC--CCceeecCC-CCccCCCcc
Q psy15475 58 LALPKGDCEPCQCYIPGTLETETFTPVCDQ--LTGQCSCKP-HVVGTNCDQ 105 (204)
Q Consensus 58 c~~~~~~C~~c~C~~~g~~~~~~~~~~C~~--~~g~C~C~~-g~~G~~C~~ 105 (204)
|+...+.|.+.+|.+++. |.+ ....|.|+. +|.|.+|+.
T Consensus 181 C~~~~~~C~~~pC~n~g~---------C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 181 CEGPSTTCQEDSCSNQGV---------CLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CCCCSSCCCTTSSSTTCE---------EEECSSSEEEECTTTSEESTTSCE
T ss_pred CCCCCCCcccccCCCCCE---------ecCCCCCceEeccCCcccCCCCCC
Confidence 333335688888998887 853 256899996 999999985
No 121
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=57.11 E-value=1.8 Score=31.94 Aligned_cols=9 Identities=56% Similarity=1.516 Sum_probs=7.2
Q ss_pred CcccCCCcc
Q psy15475 103 CDQCEVGHY 111 (204)
Q Consensus 103 C~~C~~G~~ 111 (204)
|..|++|++
T Consensus 20 C~~CppG~~ 28 (171)
T 3urf_Z 20 CDKCPPGTY 28 (171)
T ss_dssp EECBCTTEE
T ss_pred CCCCCCCce
Confidence 568888887
No 122
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=56.54 E-value=22 Score=32.52 Aligned_cols=49 Identities=22% Similarity=0.657 Sum_probs=27.4
Q ss_pred ccCC--CceeecCCCCc---cCCCcccCCCccccCCCCCCc-cCCCCCCCCCCCcccCC--CCeeecCCCCcc
Q psy15475 85 CDQL--TGQCSCKPHVV---GTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPI--TGQCLCRPGVTG 149 (204)
Q Consensus 85 C~~~--~g~C~C~~g~~---G~~C~~C~~G~~g~~~~~~C~-~c~C~~~g~~~~~C~~~--~g~C~C~~g~~G 149 (204)
|.+. .+.|.|++||. |..|+. .++|. +..|. ..|... .+.|.|++||..
T Consensus 326 C~~~~~~y~C~C~~Gy~l~~g~~C~d----------ideC~~~~~C~------~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 326 CNDLKIGYECLCPDGFQLVAQRRCED----------IDECQDPDTCS------QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp EEECSBSEEEECCTTCEEETTTEEEC----------CCCCSSSSSCT------TTCCBCSSCBCCCCCSSEEC
T ss_pred ccCCCCCcccCCCCCCccCCCCcccc----------CcccCCCCCCC------CeeecCCCCceeecCCCCEe
Confidence 5433 45788888885 555541 23443 22232 234332 457888888864
No 123
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=55.16 E-value=2.9 Score=29.59 Aligned_cols=21 Identities=33% Similarity=0.911 Sum_probs=15.8
Q ss_pred ccCC--CceeecCCCCccCCCcc
Q psy15475 85 CDQL--TGQCSCKPHVVGTNCDQ 105 (204)
Q Consensus 85 C~~~--~g~C~C~~g~~G~~C~~ 105 (204)
|... ...|.|.++|.|.+||.
T Consensus 133 C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 133 CVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp EEEETTEEEEEECTTEESTTSCE
T ss_pred eecCCCCeeEECCCCccCccccc
Confidence 7432 35788999999999874
No 124
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=37.90 E-value=20 Score=20.05 Aligned_cols=16 Identities=31% Similarity=0.681 Sum_probs=9.8
Q ss_pred ccCCC--ceeecCCCCcc
Q psy15475 85 CDQLT--GQCSCKPHVVG 100 (204)
Q Consensus 85 C~~~~--g~C~C~~g~~G 100 (204)
|.+.. +.|.|++||.+
T Consensus 26 C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 26 CHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp EEEETTEEEEECSTTCEE
T ss_pred eECCCCCeEEECCCCCeE
Confidence 65433 46777777764
No 125
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=36.98 E-value=9.6 Score=27.37 Aligned_cols=13 Identities=38% Similarity=0.703 Sum_probs=7.8
Q ss_pred CCCCCCCCCcccC
Q psy15475 150 TRCELCQPNHYGF 162 (204)
Q Consensus 150 ~~C~~C~~g~~g~ 162 (204)
..|+.|++|+|-.
T Consensus 116 t~C~~C~~Gtfs~ 128 (161)
T 1sg1_X 116 TVCEECPEGTYSD 128 (161)
T ss_dssp CEEEECCTTEECC
T ss_pred CcccCCCCCceeC
Confidence 4455677776654
No 126
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=36.33 E-value=24 Score=33.96 Aligned_cols=39 Identities=26% Similarity=0.553 Sum_probs=29.2
Q ss_pred CCCCCCCCcCCCCCCCCccCCCCCCCcccC--CCceeecC-CCCccCCCcc
Q psy15475 58 LALPKGDCEPCQCYIPGTLETETFTPVCDQ--LTGQCSCK-PHVVGTNCDQ 105 (204)
Q Consensus 58 c~~~~~~C~~c~C~~~g~~~~~~~~~~C~~--~~g~C~C~-~g~~G~~C~~ 105 (204)
|....+.|.+.+|.++|+ |.. ....|.|+ ++|.|.+|+.
T Consensus 1013 C~~~~~~C~~~pC~ngG~---------C~~~~~~~~C~C~~~g~~G~~C~~ 1054 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGV---------CLQQWDGFSCDCSMTSFSGPLCND 1054 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCE---------EEEETTEEEEECTTSSCBSTTSCB
T ss_pred eecccCceECCcCCCCCE---------eCCCCCCCEEECCCCCCCCCCccC
Confidence 333335688889999888 853 24589999 5999999986
No 127
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=36.29 E-value=7.4 Score=31.52 Aligned_cols=9 Identities=56% Similarity=1.586 Sum_probs=7.4
Q ss_pred CcccCCCcc
Q psy15475 103 CDQCEVGHY 111 (204)
Q Consensus 103 C~~C~~G~~ 111 (204)
|..|++|+|
T Consensus 26 C~~CpPGty 34 (313)
T 3u3p_A 26 CDKCPAGTY 34 (313)
T ss_dssp EECBCTTEE
T ss_pred CCCCCCCce
Confidence 678899887
No 128
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=34.97 E-value=6.8 Score=28.49 Aligned_cols=12 Identities=25% Similarity=0.648 Sum_probs=9.3
Q ss_pred cCCCcccCCCcc
Q psy15475 100 GTNCDQCEVGHY 111 (204)
Q Consensus 100 G~~C~~C~~G~~ 111 (204)
+..|..|++|+|
T Consensus 13 ~~~C~~CppG~~ 24 (167)
T 1jma_B 13 SECCPKCSPGYR 24 (167)
T ss_dssp TBCCBCBCTTEE
T ss_pred CcCCCCCCCCCE
Confidence 456788999887
No 129
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=34.91 E-value=5.2 Score=29.51 Aligned_cols=9 Identities=44% Similarity=1.276 Sum_probs=7.4
Q ss_pred CcccCCCcc
Q psy15475 103 CDQCEVGHY 111 (204)
Q Consensus 103 C~~C~~G~~ 111 (204)
|..|++|++
T Consensus 22 C~~CppG~~ 30 (176)
T 3k51_B 22 CAQCPPGTF 30 (176)
T ss_dssp EECBCTTEE
T ss_pred CCCCCCCce
Confidence 678899887
No 130
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=33.82 E-value=11 Score=26.33 Aligned_cols=26 Identities=35% Similarity=0.783 Sum_probs=14.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcCCC
Q psy15475 43 GPQCDTCLPGYFGDALALPKGDCEPCQ 69 (204)
Q Consensus 43 G~~C~~C~~g~~g~~c~~~~~~C~~c~ 69 (204)
...|..|++|+|-..+... ..|.++.
T Consensus 36 ~t~C~pC~~gtys~~~n~~-~~C~~C~ 61 (134)
T 4fhq_A 36 GTVCEPCPPGTYIAHLNGL-SKCLQCQ 61 (134)
T ss_dssp CCEEEECCTTEECCSCBCC-SSCEECC
T ss_pred CCcccCCCCCCEecCCCCC-CcCcCCC
Confidence 3457778888776555321 2465544
No 131
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=33.31 E-value=20 Score=32.73 Aligned_cols=46 Identities=24% Similarity=0.548 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCCCCc-CCCCCCCCccCCCCCCCcccCC--CceeecCCCCcc
Q psy15475 42 GGPQCDTCLPGYF---GDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVG 100 (204)
Q Consensus 42 ~G~~C~~C~~g~~---g~~c~~~~~~C~-~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~G 100 (204)
.++.| .|++||. |..|. ++++|. +.+|.. . |.+. .+.|.|.+||.+
T Consensus 331 ~~y~C-~C~~Gy~l~~g~~C~-dideC~~~~~C~~--~---------C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 331 IGYEC-LCPDGFQLVAQRRCE-DIDECQDPDTCSQ--L---------CVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp BSEEE-ECCTTCEEETTTEEE-CCCCCSSSSSCTT--T---------CCBCSSCBCCCCCSSEEC
T ss_pred CCccc-CCCCCCccCCCCccc-cCcccCCCCCCCC--e---------eecCCCCceeecCCCCEe
Confidence 34455 6889985 55664 345564 223321 2 6443 347888887754
No 132
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=31.13 E-value=14 Score=26.56 Aligned_cols=9 Identities=33% Similarity=1.124 Sum_probs=5.3
Q ss_pred CCCCCCCCC
Q psy15475 46 CDTCLPGYF 54 (204)
Q Consensus 46 C~~C~~g~~ 54 (204)
|.+|++|++
T Consensus 20 C~~CppG~~ 28 (162)
T 1ext_A 20 CTKCHKGTY 28 (162)
T ss_dssp EECBCTTEE
T ss_pred CCCCCCCcc
Confidence 456666654
No 133
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=28.94 E-value=18 Score=31.07 Aligned_cols=15 Identities=53% Similarity=1.329 Sum_probs=8.0
Q ss_pred CeeecCCCCccCCCC
Q psy15475 139 GQCLCRPGVTGTRCE 153 (204)
Q Consensus 139 g~C~C~~g~~G~~C~ 153 (204)
|.|.|.+||.|..||
T Consensus 458 G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 458 GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TEEEECTTC------
T ss_pred CceECcCCCCCCCCC
Confidence 578999999999986
No 134
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=28.91 E-value=10 Score=30.28 Aligned_cols=34 Identities=24% Similarity=0.639 Sum_probs=21.0
Q ss_pred CCCCc--CCCCCCCCccCCCCCCCcccCC--CceeecCCCCc--cCCCc
Q psy15475 62 KGDCE--PCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVV--GTNCD 104 (204)
Q Consensus 62 ~~~C~--~c~C~~~g~~~~~~~~~~C~~~--~g~C~C~~g~~--G~~C~ 104 (204)
+++|. ..+|+.++. |.+. ...|.|++||. |..|.
T Consensus 5 iDEC~~~~~~C~~~a~---------C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAE---------CRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp --CHHHHGGGSCTTEE---------EEECSSCEEEEECTTEEECSSSEE
T ss_pred chhccCCCCCCCCCCE---------eEcCCCCeEEEcCCCCCCCCCcCC
Confidence 45565 445766666 8654 34899999988 44553
No 135
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=26.74 E-value=22 Score=25.52 Aligned_cols=7 Identities=14% Similarity=0.847 Sum_probs=4.2
Q ss_pred ccCCCcc
Q psy15475 105 QCEVGHY 111 (204)
Q Consensus 105 ~C~~G~~ 111 (204)
.|.+|||
T Consensus 112 ~C~~G~f 118 (156)
T 3tje_F 112 RCKPNFF 118 (156)
T ss_dssp EECTTEE
T ss_pred eCCCCCE
Confidence 4566666
No 136
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=26.54 E-value=27 Score=33.59 Aligned_cols=34 Identities=24% Similarity=0.651 Sum_probs=27.6
Q ss_pred CCCcCCCCCCCCccCCCCCCCcccC--CCceeecC-CCCccCCCcc
Q psy15475 63 GDCEPCQCYIPGTLETETFTPVCDQ--LTGQCSCK-PHVVGTNCDQ 105 (204)
Q Consensus 63 ~~C~~c~C~~~g~~~~~~~~~~C~~--~~g~C~C~-~g~~G~~C~~ 105 (204)
+.|.+.||.+++. |.. ....|.|+ ++|.|.+|+.
T Consensus 620 ~~C~~~pC~ngg~---------C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 620 KPCLSNPCKNNGM---------CRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp CGGGSCCCCTTCE---------EEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCCccCCCCCCE---------EeCCCCCeEEECCCCCcccccCcc
Confidence 4688889999888 853 35689999 7999999974
No 137
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=25.19 E-value=32 Score=28.40 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=19.9
Q ss_pred cccCCCCCCCCCccCCC--CccccCCC-CcCCCCCC
Q psy15475 15 LCVGPPSDILKSVAGTT--GDCLKCIY-NTGGPQCD 47 (204)
Q Consensus 15 ~c~~~~~~~~~~C~~~~--g~C~~C~~-~~~G~~C~ 47 (204)
.|...||.+++.|.... ..|. |+. +|.|+.|+
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~-C~~~~~~G~~C~ 221 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCD-CSMTSFSGPLCN 221 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEE-CTTTSEESTTSC
T ss_pred CcccccCCCCCEecCCCCCceEe-ccCCcccCCCCC
Confidence 45556787777775532 2464 764 67777664
No 138
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=22.93 E-value=27 Score=29.93 Aligned_cols=15 Identities=40% Similarity=1.225 Sum_probs=8.1
Q ss_pred ceeecCCCCccCCCc
Q psy15475 90 GQCSCKPHVVGTNCD 104 (204)
Q Consensus 90 g~C~C~~g~~G~~C~ 104 (204)
|.|.|.+||.|.+||
T Consensus 458 G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 458 GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TEEEECTTC------
T ss_pred CceECcCCCCCCCCC
Confidence 688999999999986
No 139
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=20.68 E-value=16 Score=27.84 Aligned_cols=12 Identities=50% Similarity=1.287 Sum_probs=8.8
Q ss_pred cCCCcccCCCcc
Q psy15475 100 GTNCDQCEVGHY 111 (204)
Q Consensus 100 G~~C~~C~~G~~ 111 (204)
|.-|..|++|++
T Consensus 43 ~~CC~~CppG~~ 54 (216)
T 3me4_A 43 GRCCSRCEPGKY 54 (216)
T ss_dssp TEEEECBCTTEE
T ss_pred CCCcCCCCCCce
Confidence 444778888887
No 140
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=20.50 E-value=21 Score=30.82 Aligned_cols=15 Identities=53% Similarity=1.234 Sum_probs=0.0
Q ss_pred CeeecCCCCccCCCC
Q psy15475 139 GQCLCRPGVTGTRCE 153 (204)
Q Consensus 139 g~C~C~~g~~G~~C~ 153 (204)
|.|.|.+||.|..||
T Consensus 479 G~C~C~~G~~G~~Ce 493 (503)
T 3v4v_B 479 GVCSCAPGRLGRLCE 493 (503)
T ss_dssp ---------------
T ss_pred CceECcCCCcCCCCC
Confidence 467889999998885
Done!