Your job contains 1 sequence.
>psy15475
MSLDVHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL
PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK
SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL
QCDPSGQCPGVFMNRAEMSSDDVR
The BLAST search returned 13 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15475
(204 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 582 4.0e-55 1
ZFIN|ZDB-GENE-021226-3 - symbol:lamc1 "laminin, gamma 1" ... 527 2.8e-49 1
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 522 9.9e-49 1
UNIPROTKB|P11047 - symbol:LAMC1 "Laminin subunit gamma-1"... 497 4.5e-46 1
UNIPROTKB|F1NI05 - symbol:LAMC1 "Uncharacterized protein"... 491 7.0e-46 1
UNIPROTKB|F1NK49 - symbol:LAMC1 "Uncharacterized protein"... 491 1.9e-45 1
UNIPROTKB|F1S663 - symbol:LAMC1 "Uncharacterized protein"... 489 3.2e-45 1
UNIPROTKB|F1PHK9 - symbol:LAMC1 "Uncharacterized protein"... 488 3.5e-45 1
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 486 6.6e-45 1
UNIPROTKB|F1MD77 - symbol:LAMC1 "Uncharacterized protein"... 486 6.6e-45 1
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 484 1.1e-44 1
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 459 4.9e-42 1
MGI|MGI:1344394 - symbol:Lamc3 "laminin gamma 3" species:... 454 1.7e-41 1
UNIPROTKB|Q9Y6N6 - symbol:LAMC3 "Laminin subunit gamma-3"... 451 3.4e-41 1
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 444 3.8e-41 2
UNIPROTKB|F1NCH8 - symbol:F1NCH8 "Uncharacterized protein... 449 4.9e-41 1
FB|FBgn0261800 - symbol:LanB1 "LanB1" species:7227 "Droso... 443 3.0e-40 1
UNIPROTKB|E1C700 - symbol:LAMB2 "Uncharacterized protein"... 418 1.4e-37 1
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 403 5.4e-36 1
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 405 8.3e-36 1
UNIPROTKB|A4D0S4 - symbol:LAMB4 "Laminin subunit beta-4" ... 400 1.1e-35 1
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 396 7.6e-35 1
ZFIN|ZDB-GENE-060118-1 - symbol:lama1 "laminin, alpha 1" ... 392 1.6e-34 1
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 384 5.8e-34 1
RGD|1306311 - symbol:Lamb1 "laminin, beta 1" species:1011... 384 5.9e-34 1
UNIPROTKB|F1MNT4 - symbol:LAMB1 "Uncharacterized protein"... 381 1.2e-33 1
MGI|MGI:96743 - symbol:Lamb1 "laminin B1" species:10090 "... 380 1.5e-33 1
ZFIN|ZDB-GENE-021226-2 - symbol:lamb4 "laminin, beta 4" s... 380 1.6e-33 1
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 383 1.8e-33 1
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 382 1.9e-33 1
UNIPROTKB|F1P420 - symbol:LAMA2 "Uncharacterized protein"... 381 2.4e-33 1
UNIPROTKB|F1MEG3 - symbol:LAMA1 "Uncharacterized protein"... 378 4.9e-33 1
UNIPROTKB|P07942 - symbol:LAMB1 "Laminin subunit beta-1" ... 374 6.6e-33 1
UNIPROTKB|F1NLU4 - symbol:LAMB3 "Uncharacterized protein"... 371 7.1e-33 1
MGI|MGI:99892 - symbol:Lama1 "laminin, alpha 1" species:1... 376 8.2e-33 1
WB|WBGene00002247 - symbol:lam-1 species:6239 "Caenorhabd... 373 8.5e-33 1
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 368 2.9e-32 1
RGD|1307207 - symbol:Lama1 "laminin, alpha 1" species:101... 370 3.5e-32 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 370 4.4e-32 1
UNIPROTKB|P25391 - symbol:LAMA1 "Laminin subunit alpha-1"... 369 4.5e-32 1
UNIPROTKB|E2R4J1 - symbol:LAMB2 "Uncharacterized protein"... 359 9.1e-32 2
UNIPROTKB|F1NJ23 - symbol:LAMB1 "Laminin subunit beta-1" ... 361 1.6e-31 1
UNIPROTKB|F1PJ02 - symbol:LAMA1 "Uncharacterized protein"... 362 2.5e-31 1
FB|FBgn0261563 - symbol:wb "wing blister" species:7227 "D... 328 4.5e-31 2
MGI|MGI:99916 - symbol:Lamb2 "laminin, beta 2" species:10... 356 5.5e-31 1
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 359 6.4e-31 1
UNIPROTKB|F1PEZ5 - symbol:LAMA2 "Uncharacterized protein"... 357 8.5e-31 1
UNIPROTKB|F1PVY5 - symbol:LAMA2 "Uncharacterized protein"... 357 8.6e-31 1
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 357 8.6e-31 1
RGD|2988 - symbol:Lamb2 "laminin, beta 2" species:10116 "... 353 1.1e-30 1
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 355 1.4e-30 1
UNIPROTKB|F1N8P9 - symbol:LAMA1 "Uncharacterized protein"... 354 1.8e-30 1
UNIPROTKB|F1NM47 - symbol:LAMA1 "Uncharacterized protein"... 354 1.8e-30 1
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 354 2.2e-30 1
UNIPROTKB|F1LPI5 - symbol:Lamb3 "Protein Lamb3" species:1... 347 2.6e-30 1
UNIPROTKB|F1PFM5 - symbol:LAMB3 "Uncharacterized protein"... 347 2.6e-30 1
UNIPROTKB|F1MMK1 - symbol:LAMB3 "Uncharacterized protein"... 346 3.4e-30 1
RGD|1308889 - symbol:Lama2 "laminin, alpha 2" species:101... 350 4.7e-30 1
MGI|MGI:105382 - symbol:Lama5 "laminin, alpha 5" species:... 350 5.8e-30 1
MGI|MGI:99912 - symbol:Lama2 "laminin, alpha 2" species:1... 349 6.1e-30 1
UNIPROTKB|E1BDK6 - symbol:LAMB2 "Uncharacterized protein"... 344 1.0e-29 1
UNIPROTKB|P55268 - symbol:LAMB2 "Laminin subunit beta-2" ... 343 1.3e-29 1
ZFIN|ZDB-GENE-040724-213 - symbol:lama4 "laminin, alpha 4... 341 2.3e-29 1
MGI|MGI:99915 - symbol:Lamb3 "laminin, beta 3" species:10... 338 2.4e-29 1
UNIPROTKB|Q13751 - symbol:LAMB3 "Laminin subunit beta-3" ... 336 3.9e-29 1
UNIPROTKB|E1BP05 - symbol:USH2A "Uncharacterized protein"... 341 7.7e-29 1
MGI|MGI:1341292 - symbol:Ush2a "Usher syndrome 2A (autoso... 339 1.3e-28 1
UNIPROTKB|F1NZ77 - symbol:USH2A "Uncharacterized protein"... 339 1.3e-28 1
RGD|628777 - symbol:Ush2a "Usher syndrome 2A (autosomal r... 332 1.5e-28 1
ZFIN|ZDB-GENE-060503-794 - symbol:ush2a "Usher syndrome 2... 333 5.5e-28 1
WB|WBGene00001328 - symbol:epi-1 species:6239 "Caenorhabd... 330 7.7e-28 1
UNIPROTKB|F1SPT5 - symbol:LAMB2 "Uncharacterized protein"... 324 1.2e-27 1
ZFIN|ZDB-GENE-060119-1 - symbol:lama2 "laminin, alpha 2" ... 317 9.4e-27 2
UNIPROTKB|O75445 - symbol:USH2A "Usherin" species:9606 "H... 318 2.1e-26 1
UNIPROTKB|F1N0T1 - symbol:Bt.54919 "Uncharacterized prote... 304 1.6e-25 1
UNIPROTKB|E1B7Q3 - symbol:LAMC2 "Uncharacterized protein"... 302 1.7e-25 1
UNIPROTKB|E5RFQ2 - symbol:LAMA4 "Laminin subunit alpha-4"... 281 1.2e-24 1
UNIPROTKB|F1MYX9 - symbol:LAMA4 "Uncharacterized protein"... 294 2.2e-24 1
UNIPROTKB|F1MER7 - symbol:HSPG2 "Uncharacterized protein"... 297 3.0e-24 1
MGI|MGI:109321 - symbol:Lama4 "laminin, alpha 4" species:... 289 7.5e-24 1
UNIPROTKB|F1PR66 - symbol:LAMA4 "Uncharacterized protein"... 288 9.2e-24 1
UNIPROTKB|E1BXK1 - symbol:LAMC2 "Uncharacterized protein"... 285 1.1e-23 1
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 288 2.0e-23 1
MGI|MGI:99913 - symbol:Lamc2 "laminin, gamma 2" species:1... 280 3.8e-23 1
UNIPROTKB|Q16363 - symbol:LAMA4 "Laminin subunit alpha-4"... 281 5.3e-23 1
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 261 8.0e-23 2
UNIPROTKB|Q9H1U4 - symbol:MEGF9 "Multiple epidermal growt... 271 9.9e-23 1
UNIPROTKB|F1LRH4 - symbol:Lamc2 "Protein Lamc2" species:1... 275 1.3e-22 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 279 1.8e-22 1
UNIPROTKB|P98160 - symbol:HSPG2 "Basement membrane-specif... 277 3.9e-22 1
MGI|MGI:96257 - symbol:Hspg2 "perlecan (heparan sulfate p... 276 4.2e-22 1
UNIPROTKB|Q13753 - symbol:LAMC2 "Laminin subunit gamma-2"... 266 1.2e-21 1
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 263 1.7e-21 2
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 268 2.6e-21 1
UNIPROTKB|F1P3E3 - symbol:AGRN "Agrin" species:9031 "Gall... 263 4.8e-21 1
UNIPROTKB|F1NWQ6 - symbol:AGRN "Agrin" species:9031 "Gall... 263 4.9e-21 1
UNIPROTKB|P31696 - symbol:AGRN "Agrin" species:9031 "Gall... 263 5.2e-21 1
UNIPROTKB|F1NSZ5 - symbol:LAMA4 "Uncharacterized protein"... 262 5.4e-21 1
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 265 5.5e-21 1
FB|FBgn0261451 - symbol:trol "terribly reduced optic lobe... 192 7.3e-20 2
WARNING: Descriptions of 355 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 582 (209.9 bits), Expect = 4.0e-55, P = 4.0e-55
Identities = 95/160 (59%), Positives = 115/160 (71%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG+CLKCI+NT G CD CL G+FGD LALP G C+ C CY GT + E CDQ+T
Sbjct: 864 TTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVT 923
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC CKP+V+G +C +C+ G++NI SG GC++C CDPVGS N TCD +GQC CRPGV G
Sbjct: 924 GQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMG 983
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
RC+ C+ YGFS +GCKPC CD GS QCD +GQCP
Sbjct: 984 QRCDQCENYFYGFSSEGCKPCECDESGSKGFQCDQNGQCP 1023
Score = 302 (111.4 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 70/202 (34%), Positives = 98/202 (48%)
Query: 12 DILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ-C 70
D C P + T C +C G +C+ C G+FGD L G+ + C+ C
Sbjct: 789 DCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGL-LGEVQTCKSC 847
Query: 71 YIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYN--IISGEG-CKSCDCDP 126
G ++ C++ TG+C C + G +CDQC GH+ + G C C C
Sbjct: 848 DCNGNVDPNAVGN-CNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYE 906
Query: 127 VG------SLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF-SLDGCKPCMCDPIGSNS 179
G S+ R CD +TGQC C+P V G C CQP ++ S +GC+ C+CDP+GS +
Sbjct: 907 AGTEQDEQSITR-CDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYN 965
Query: 180 LQCDP-SGQC---PGVFMNRAE 197
CD SGQC PGV R +
Sbjct: 966 STCDRYSGQCHCRPGVMGQRCD 987
Score = 274 (101.5 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 59/141 (41%), Positives = 71/141 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVCDQLT 89
TG C +C N G C C PGYF + G+ CE C C G+ + CD+ +
Sbjct: 923 TGQC-QCKPNVIGRDCGECQPGYFN----IRSGNGCENCLCDPVGS-----YNSTCDRYS 972
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+P V+G CDQCE Y S EGCK C+CD GS CD GQC C V G
Sbjct: 973 GQCHCRPGVMGQRCDQCENYFYGF-SSEGCKPCECDESGSKGFQCDQ-NGQCPCNDNVEG 1030
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C+ N Y GC C
Sbjct: 1031 RRCDRCKENKYDRHR-GCIDC 1050
Score = 268 (99.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 66/187 (35%), Positives = 92/187 (49%)
Query: 16 CVGPPSDILKSVAGTTGD---CLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPC 68
C G S + S G G+ +C +NT GP CD CLP Y + + + +C+ C
Sbjct: 301 CNGHASKCVPST-GMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKAC 359
Query: 69 QCYIPGTLETETFTPVCDQLTGQ---C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC 124
C G + F TG C C+ + G NC++C+ Y G C +C C
Sbjct: 360 NCN--GLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGY-CVNCAC 416
Query: 125 DPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS--NSLQC 182
DPVGS + C+ G+C C+PGVTG +C+ C N+Y F GC+ C CD GS N+ C
Sbjct: 417 DPVGSRSLQCNS-HGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPAC 475
Query: 183 DP-SGQC 188
D +G C
Sbjct: 476 DTETGIC 482
Score = 250 (93.1 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 52/149 (34%), Positives = 67/149 (44%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G G CL C N GP C+ C ++ G C C C G+ + C+
Sbjct: 379 GHGGHCLDCRENRDGPNCERCKENFY----MRDDGYCVNCACDPVGSRSLQ-----CNS- 428
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
G+C CKP V G CD+C+ +Y GC+ C CD GS T CD TG C C+
Sbjct: 429 HGKCQCKPGVTGDKCDRCDNNYYQF-GPHGCQQCGCDSGGSHQNTPACDTETGICFCKEN 487
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMC 172
V G RC C+P + + GC PC C
Sbjct: 488 VEGRRCNECKPGFFNLDKNNRFGCTPCFC 516
Score = 233 (87.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 63/181 (34%), Positives = 84/181 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTPVCDQLT 89
TG C+ C +NT G CD C G++G+AL DC+ C C G L+ T +C +
Sbjct: 757 TGRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDGACLQINEDTVICTE-- 813
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDC----DP--VGSLNRTCDPIT 138
C G+ C+QC G + +G + CKSCDC DP VG+ NRT T
Sbjct: 814 ----CPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRT----T 865
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL---DG-CKPCMCDPIGSNS-----LQCDP-SGQ 187
G+CL C G C+ C H+G L G C C C G+ +CD +GQ
Sbjct: 866 GECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQ 925
Query: 188 C 188
C
Sbjct: 926 C 926
Score = 196 (74.1 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 56/168 (33%), Positives = 77/168 (45%)
Query: 43 GPQCDTCLPGY-FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C++C PGY A P C PC C+ G + +CD TG+C C+ + G
Sbjct: 718 GQFCESCAPGYRHSPARGGPFMPCIPCDCH--GHAD------ICDSETGRCICQHNTHGD 769
Query: 102 NCDQCEVGHY-NIISG--EGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGTRCELCQP 157
NCDQC G Y N + G CK C C G+ + + T C C G G+RCE C
Sbjct: 770 NCDQCAKGFYGNALGGTPNDCKRCPCPNDGACLQINED-TVICTECPKGYFGSRCEQCSD 828
Query: 158 NHYG--FSLDG----CKPCMCDP-IGSNSL-QCD-PSGQCPGVFMNRA 196
+G L G CK C C+ + N++ C+ +G+C N A
Sbjct: 829 GFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTA 876
Score = 171 (65.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 37/97 (38%), Positives = 46/97 (47%)
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPGV 147
G+C CKP V G CD+C+ +Y GC+ C CD GS T CD TG C C+ V
Sbjct: 430 GKCQCKPGVTGDKCDRCDNNYYQF-GPHGCQQCGCDSGGSHQNTPACDTETGICFCKENV 488
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
G RC C+P F+LD +N C P
Sbjct: 489 EGRRCNECKPGF--FNLDK----------NNRFGCTP 513
Score = 153 (58.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 40/124 (32%), Positives = 56/124 (45%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPG 146
QC+C +G C+ C G+ + + G C CDC + CD TG+C+C+
Sbjct: 709 QCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI---CDSETGRCICQHN 765
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPSG----QCP-GVFMNRAE 197
G C+ C YG +L G CK C C G+ LQ + +CP G F +R E
Sbjct: 766 THGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDGA-CLQINEDTVICTECPKGYFGSRCE 824
Query: 198 MSSD 201
SD
Sbjct: 825 QCSD 828
Score = 77 (32.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCY 71
TG C C N G +C+ C PG+F L K + C PC CY
Sbjct: 479 TGICF-CKENVEGRRCNECKPGFFN----LDKNNRFGCTPCFCY 517
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 527 (190.6 bits), Expect = 2.8e-49, P = 2.8e-49
Identities = 89/176 (50%), Positives = 118/176 (67%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVCDQLT 89
+G+CLKCIYNT G CD C G++GDA A D C+PC+C GT++ +T C Q+T
Sbjct: 830 SGECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQT---ACSQVT 886
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV+ +C CE+G YN+ SG+GC+ C+C+P+GS N CD ++GQC C+PGVTG
Sbjct: 887 GQCPCLPHVINRDCGACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTG 946
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC---PGVFMNRAEMSSDD 202
CE C+ N +GFS GCKPC CDP GS S QC G+C PG +R +M ++
Sbjct: 947 QHCERCEVNFFGFSSSGCKPCDCDPEGSESAQCKEDGRCHCRPGFVGSRCDMCEEN 1002
Score = 315 (115.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 68/182 (37%), Positives = 95/182 (52%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCY 71
C G S+ +K+ C C +NT G C+ C P Y + A A +C PC C
Sbjct: 272 CNGHASECVKNEYSKLV-C-NCKHNTEGADCNVCKPFYNDRPWRRATAENPNECLPCNCN 329
Query: 72 IPGTLETETFTPVCDQLTGQ---C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
G F P + TG C +C + G C++C +Y SG+ C SC C+PV
Sbjct: 330 --GKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERCLANYYREASGQRCLSCGCNPV 387
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSG 186
GSL+ CD TG+C C+PGV G +C+ CQP ++ S GC+PC C+P GS +CD +G
Sbjct: 388 GSLSTQCDN-TGRCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGSTQ-ECDVQTG 445
Query: 187 QC 188
+C
Sbjct: 446 RC 447
Score = 303 (111.7 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 63/155 (40%), Positives = 84/155 (54%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFT 82
L G G C C NT GP+C+ CL Y+ +A G C C C G+L T+
Sbjct: 341 LYRATGHGGHCRNCADNTDGPKCERCLANYYREA----SGQRCLSCGCNPVGSLSTQ--- 393
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
CD TG+CSCKP V+G CD+C+ G Y+ +S GC+ C C+P GS + CD TG+C
Sbjct: 394 --CDN-TGRCSCKPGVMGDKCDRCQPG-YHSLSEAGCRPCSCNPAGS-TQECDVQTGRCQ 448
Query: 143 CRPGVTGTRCELCQPNHYGFSLD-----GCKPCMC 172
C+ V G C+ C+ + F+LD GC PC C
Sbjct: 449 CKENVDGFNCDRCKLGY--FNLDPQNPQGCTPCFC 481
Score = 283 (104.7 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 56/141 (39%), Positives = 77/141 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ + C C G++ L KG CE C C G+ + CD ++G
Sbjct: 886 TGQC-PCLPHVINRDCGACELGFYN--LQSGKG-CERCNCNPIGSTNGQ-----CDIVSG 936
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P V G +C++CEV + S GCK CDCDP GS + C G+C CRPG G+
Sbjct: 937 QCECQPGVTGQHCERCEVNFFGF-SSSGCKPCDCDPEGSESAQCKE-DGRCHCRPGFVGS 994
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC++C+ N+ Y S GC+ C
Sbjct: 995 RCDMCEENYFYNRSTPGCQQC 1015
Score = 222 (83.2 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 58/180 (32%), Positives = 81/180 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C +NT G C+ C G++GD+ DC+ C C T P +++
Sbjct: 721 TGMC-NCQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPCPAGATCAV---VPKTNEVV- 775
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDC----DP--VGSLNRTCDPIT 138
C+ C G C+ C+ G + GE C++C C DP VG+ NR +
Sbjct: 776 -CTNCPTGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIDPNAVGNCNRE----S 830
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFS-----LDGCKPCMCDPIGSNSLQ--CDP-SGQCP 189
G+CL C G C+ C+ YG + D CKPC C P G+ Q C +GQCP
Sbjct: 831 GECLKCIYNTAGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCP 890
Score = 198 (74.8 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 60/186 (32%), Positives = 84/186 (45%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALALPK-GDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
KC G G C+ C G+ L + CE C C G +T CD TG C
Sbjct: 673 KCTCPQGYLGQHCEQCDQGFRRSRPELRRFSTCERCNCN--GHSDT------CDPETGMC 724
Query: 93 SCKPHVVGTNCDQCEVGHYN---IISGEGCKSCDCDPVGSLNRTCD--PITGQCLCR--P 145
+C+ + G +C++C+ G Y + S CK+C C P G+ TC P T + +C P
Sbjct: 725 NCQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPC-PAGA---TCAVVPKTNEVVCTNCP 780
Query: 146 -GVTGTRCELCQPNHYGFSLD------GCKPCMCDP-IGSNSL-QCD-PSGQCPGVFMNR 195
G TG RCELC +G L C+ C C+ I N++ C+ SG+C N
Sbjct: 781 TGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIDPNAVGNCNRESGECLKCIYNT 840
Query: 196 AEMSSD 201
A + D
Sbjct: 841 AGVFCD 846
Score = 187 (70.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 41/113 (36%), Positives = 56/113 (49%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L + TG C C G +CD C PGY +L + C PC C
Sbjct: 380 LSCGCNPVGSLSTQCDNTGRC-SCKPGVMGDKCDRCQPGYH----SLSEAGCRPCSCNPA 434
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDC 124
G+ T CD TG+C CK +V G NCD+C++G++N+ + +GC C C
Sbjct: 435 GS------TQECDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQNPQGCTPCFC 481
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 29/95 (30%), Positives = 44/95 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C G C+ C +FG C+PC C G+ + C + G
Sbjct: 935 SGQC-ECQPGVTGQHCERCEVNFFG----FSSSGCKPCDCDPEGSESAQ-----CKE-DG 983
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC-DC 124
+C C+P VG+ CD CE ++ S GC+ C +C
Sbjct: 984 RCHCRPGFVGSRCDMCEENYFYNRSTPGCQQCPNC 1018
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 522 (188.8 bits), Expect = 9.9e-49, P = 9.9e-49
Identities = 89/161 (55%), Positives = 111/161 (68%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETET-FTPV-CDQL 88
TG+C KCI+NT G C+ C PGY+GDAL PKG+C+ C C+ GT +T + C+Q
Sbjct: 853 TGECKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECNQQ 912
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
GQC C P+V+G CDQC G YNI SG GC+ C+CDP+GS TCD TGQC C+PGVT
Sbjct: 913 DGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNTCDVNTGQCQCKPGVT 972
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RC+ C H+GFS +GC+PC C+ IGS + QCD SGQC
Sbjct: 973 GQRCDRCADYHFGFSANGCQPCDCEYIGSENQQCDVNSGQC 1013
Score = 305 (112.4 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 61/139 (43%), Positives = 76/139 (54%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C+ N G QCD C G++ L G C+ C C G+ E T CD TGQ
Sbjct: 914 GQC-DCLPNVIGIQCDQCAHGFYNITSGL--G-CQECNCDPLGS-EGNT----CDVNTGQ 964
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C CKP V G CD+C H+ S GC+ CDC+ +GS N+ CD +GQCLC+ V G R
Sbjct: 965 CQCKPGVTGQRCDRCADYHFGF-SANGCQPCDCEYIGSENQQCDVNSGQCLCKENVEGRR 1023
Query: 152 CELCQPNHYGFSLDGCKPC 170
C+ C N YG + GC PC
Sbjct: 1024 CDQCAENRYGIT-QGCLPC 1041
Score = 277 (102.6 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 64/180 (35%), Positives = 90/180 (50%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G G C+ C NT G C+ C+ ++ + C C C G+L T+ CD
Sbjct: 367 GHGGHCIDCQGNTQGVHCEQCIANHWRRP---GENYCVACGCNEIGSLSTQ-----CDN- 417
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
G+C CKP V G CDQC G Y+ S GCK+C C+ GSLN CD +G C C+
Sbjct: 418 EGKCQCKPGVTGRFCDQCLDGFYDF-STNGCKNCGCETSGSLNNQPRCDSSSGSCSCKLN 476
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPSGQCPGVF-MNRAEMSSDD 202
V G +C+ C+P ++ S + GC PC C G +S+ C+ + G F MN + + D
Sbjct: 477 VEGRQCDKCKPGYFDLSTENQFGCTPCFC--FGHSSI-CNTAD---GYFAMNVSSVFDQD 530
Score = 264 (98.0 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 63/187 (33%), Positives = 88/187 (47%)
Query: 16 CVGPPSDIL--KSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQ 69
C G S+ + SV G +C +NT G C+ CLP Y + ++ +C C
Sbjct: 289 CNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGTSVEANECIACN 348
Query: 70 CYIPGTLETET-FTPVCDQLTGQ---C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC 124
C L F + TG C C+ + G +C+QC H+ C +C C
Sbjct: 349 C---SQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQCIANHWRRPGENYCVACGC 405
Query: 125 DPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS--NSLQC 182
+ +GSL+ CD G+C C+PGVTG C+ C Y FS +GCK C C+ GS N +C
Sbjct: 406 NEIGSLSTQCDN-EGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSGSLNNQPRC 464
Query: 183 DPS-GQC 188
D S G C
Sbjct: 465 DSSSGSC 471
Score = 217 (81.4 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 60/182 (32%), Positives = 82/182 (45%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV- 84
S +G C+ C +NT G C+ C GY+GDAL + DC+ C C G V
Sbjct: 744 SCEAESGSCI-CEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPCILHADGDVI 802
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDC----DPVGSLNRTCDPITG 139
C + C G CD+C G++ N G C C C DP S+ CD ITG
Sbjct: 803 CTE------CPNGYTGRRCDECSDGYFGNPKDGTECVECACSGNTDP-NSIGN-CDKITG 854
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL----DGCKPCMCDPIGS---NS----LQCDPS-G 186
+C C G CE C+P ++G +L C+ C C G+ N+ L+C+ G
Sbjct: 855 ECKKCIFNTHGFNCENCKPGYWGDALIEPKGNCQSCGCFAAGTRRPNNDYTLLECNQQDG 914
Query: 187 QC 188
QC
Sbjct: 915 QC 916
Score = 172 (65.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 54/203 (26%), Positives = 86/203 (42%)
Query: 4 DVHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA-LALPK 62
D+ ++S +++ PS A C +C+ G C++C G+ + P
Sbjct: 672 DIGYLSNVNLGTAGVAPSAANPKQATWIEHC-ECLPGFVGQFCESCESGFRRETKFGGPF 730
Query: 63 GDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISG--EGC 119
C C C+ + C+ +G C C+ + G C++C G+Y + + G E C
Sbjct: 731 NHCIKCDCH--------NHSNSCEAESGSCICEHNTAGDTCERCARGYYGDALQGTEEDC 782
Query: 120 KSCDCDPVGS--LNRTCDPITGQCLCRP-GVTGTRCELCQPNHYGFSLDG--CKPCMCDP 174
+ C C G L+ D I +C P G TG RC+ C ++G DG C C C
Sbjct: 783 QKCPCPNDGPCILHADGDVICTEC---PNGYTGRRCDECSDGYFGNPKDGTECVECACSG 839
Query: 175 -IGSNSL-QCDP-SGQCPGVFMN 194
NS+ CD +G+C N
Sbjct: 840 NTDPNSIGNCDKITGECKKCIFN 862
Score = 162 (62.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 36/114 (31%), Positives = 53/114 (46%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L + G C +C G CD CL G++ C+ C C G+L + P
Sbjct: 411 LSTQCDNEGKC-QCKPGVTGRFCDQCLDGFYD----FSTNGCKNCGCETSGSLNNQ---P 462
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCD 135
CD +G CSCK +V G CD+C+ G++++ + GC C C S+ T D
Sbjct: 463 RCDSSSGSCSCKLNVEGRQCDKCKPGYFDLSTENQFGCTPCFCFGHSSICNTAD 516
Score = 147 (56.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 38/122 (31%), Positives = 50/122 (40%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C C P VG C+ CE G G C CDC + + +C+ +G C+C
Sbjct: 702 CECLPGFVGQFCESCESGFRRETKFGGPFNHCIKCDCH---NHSNSCEAESGSCICEHNT 758
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPS---GQCP-GVFMNRAEMS 199
G CE C +YG +L G C+ C C G L D +CP G R +
Sbjct: 759 AGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPCILHADGDVICTECPNGYTGRRCDEC 818
Query: 200 SD 201
SD
Sbjct: 819 SD 820
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 497 (180.0 bits), Expect = 4.5e-46, P = 4.5e-46
Identities = 86/176 (48%), Positives = 112/176 (63%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C+ C C + GT++ ++ C+ +T
Sbjct: 846 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSS---CNPVT 902
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G YN+ SG+GC+ CDC +GS N CD TGQC C+PG+TG
Sbjct: 903 GQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITG 962
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP---GVFMNRAEMSSDD 202
CE C+ NH+GF +GCKPC C P GS SLQC G+C G NR + ++
Sbjct: 963 QHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDQCEEN 1018
Score = 307 (113.1 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 66/183 (36%), Positives = 96/183 (52%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +K+ C C +NT G C+ CLP +F D A A +C PC C
Sbjct: 288 CNGHASECMKNEFDKLV-C-NCKHNTYGVDCEKCLP-FFNDRPWRRATAESASECLPCDC 344
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C+ C+ + G +C++C + + + E C SC C P
Sbjct: 345 N--GRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSSCHCSP 402
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD G+C C+PGV G +C+ CQP + + GC+PC CDP GS +C+ +
Sbjct: 403 VGSLSTQCDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSID-ECNIET 460
Query: 186 GQC 188
G+C
Sbjct: 461 GRC 463
Score = 298 (110.0 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 57/141 (40%), Positives = 78/141 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + G C C PG++ L +G CE C C+ G+ + CD TG
Sbjct: 902 TGQC-ECLPHVTGQDCGACDPGFYN--LQSGQG-CERCDCHALGSTNGQ-----CDIRTG 952
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P + G +C++CEV H+ EGCK CDC P GSL+ C G+C CR G G
Sbjct: 953 QCECQPGITGQHCERCEVNHFGF-GPEGCKPCDCHPEGSLSLQCKD-DGRCECREGFVGN 1010
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 1011 RCDQCEENYFYNRSWPGCQEC 1031
Score = 285 (105.4 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 58/161 (36%), Positives = 82/161 (50%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPG 74
C P ++ +S G G C C NT G C+ C +F L + C C C G
Sbjct: 351 CYFDP-ELYRST-GHGGHCTNCQDNTDGAHCERCRENFF----RLGNNEACSSCHCSPVG 404
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
+L T+ CD G+CSCKP V+G CD+C+ G +++ GC+ C CDP GS++ C
Sbjct: 405 SLSTQ-----CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDPSGSIDE-C 456
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
+ TG+C+C+ V G CE C+P + GC PC C
Sbjct: 457 NIETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC 497
Score = 230 (86.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/179 (34%), Positives = 83/179 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C NT GP C+ C GY+GD+ A DC+PC C PG P ++
Sbjct: 737 TGVC-NCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPC--PGGSSCAV-VPKTKEVV- 791
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DP--VGSLNRTCDPIT 138
C+ C G C+ C+ G++ G C+ C C DP VG+ NR +T
Sbjct: 792 -CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNR----LT 846
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D CK C C+ G+ Q C+P +GQC
Sbjct: 847 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQC 905
Score = 206 (77.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 66/206 (32%), Positives = 92/206 (44%)
Query: 12 DILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQC 70
D+ L P V T + C GG C+ CL GY + L P C C C
Sbjct: 670 DVTLASARPGP---GVPATWVESCTCPVGYGGQFCEMCLSGYRRETPNLGPYSPCVLCAC 726
Query: 71 YIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEG--CKSCDCDPV 127
G ET CD TG C+C+ + G +C++C G+Y + +G C+ C C P
Sbjct: 727 N--GHSET------CDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPC-PG 777
Query: 128 GSLNRTCDPITGQCLCR--P-GVTGTRCELCQPNHYGFSL--DG----CKPCMC-DPIGS 177
GS + P T + +C P G TG RCELC ++G L +G C+ C C D I
Sbjct: 778 GS-SCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDP 836
Query: 178 NSL-QCDP-SGQCPGVFMNRAEMSSD 201
N++ C+ +G+C N A D
Sbjct: 837 NAVGNCNRLTGECLKCIYNTAGFYCD 862
Score = 194 (73.4 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD G+CSCKP V+G CD+C+ G +++ GC+ C CDP GS++ C+ TG+C+C+
Sbjct: 410 CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDPSGSIDE-CNIETGRCVCK 466
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F+L+ SN C P
Sbjct: 467 DNVEGFNCERCKPGF--FNLES----------SNPRGCTP 494
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 491 (177.9 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 84/159 (52%), Positives = 103/159 (64%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C C C GT+ +T C+Q+T
Sbjct: 601 TGECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTS---CNQVT 657
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C HV +C CE G +N+ SG GC+ CDC +GS N CD TGQC C+PGVTG
Sbjct: 658 GQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTG 717
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
RC+ C+ NH+GF +GCKPC CDP GS +LQC G+C
Sbjct: 718 QRCDRCEANHFGFGPEGCKPCDCDPEGSRALQCREDGRC 756
Score = 324 (119.1 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 69/183 (37%), Positives = 97/183 (53%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +++ G C C +NT G C+ CLP +F D A A +C PC C
Sbjct: 43 CNGHASECIRNELGKLV-C-NCKHNTFGDDCEKCLP-FFNDRPWRRATAESANECLPCDC 99
Query: 71 YIPGTLETETFTPVCDQLTGQ---C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C C+ + G +C++C Y + S EGC C C+P
Sbjct: 100 N--GRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNP 157
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD GQC C+PGV G +C+ CQP + S GC+PC C+P GS +C+ +
Sbjct: 158 VGSLSTQCDSY-GQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGSTG-ECNMET 215
Query: 186 GQC 188
G+C
Sbjct: 216 GRC 218
Score = 293 (108.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 63/162 (38%), Positives = 85/162 (52%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P ++ +S G G C+ C NT G C+ C ++ L +G C PC C G+
Sbjct: 106 CYFDP-ELYRST-GHGGHCMGCRDNTDGAHCERCRDSFY--RLGSEEG-CLPCSCNPVGS 160
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L T+ CD GQCSCKP V+G CD+C+ G +++ S GC+ C C+P GS C+
Sbjct: 161 LSTQ-----CDSY-GQCSCKPGVMGEKCDRCQPGFHSL-SEAGCRPCSCNPAGSTGE-CN 212
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD-----GCKPCMC 172
TG+C C+ V G CE C+P F LD GC PC C
Sbjct: 213 METGRCTCKDNVEGFHCERCKPGF--FHLDPSNPRGCTPCFC 252
Score = 291 (107.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 57/141 (40%), Positives = 75/141 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + C C PG+F L +G CE C C+ G+ + CD TG
Sbjct: 657 TGQC-ECLSHVTERDCSACEPGFFN--LQSGRG-CERCDCHALGSTNGQ-----CDIWTG 707
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P V G CD+CE H+ EGCK CDCDP GS C G+C C+ G G+
Sbjct: 708 QCECQPGVTGQRCDRCEANHFGF-GPEGCKPCDCDPEGSRALQCRE-DGRCECKEGFVGS 765
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 766 RCDQCEENYFYNRSWPGCQEC 786
Score = 218 (81.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 61/179 (34%), Positives = 83/179 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C NT G C+ C GY+GDA A DC+PC C PG P ++
Sbjct: 492 TGMC-DCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPC--PGGSSCAV-VPRTKEVV- 546
Query: 91 QC-SCKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DP--VGSLNRTCDPIT 138
C SC+ G C+ C+ ++ GE C+ C C DP VG+ NR T
Sbjct: 547 -CTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQ----T 601
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D C+ C C+P G+ + Q C+ +GQC
Sbjct: 602 GECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQC 660
Score = 213 (80.0 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 60/175 (34%), Positives = 84/175 (48%)
Query: 43 GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C+ C PGY + L P C PC C G ET CD TG C C+ + G+
Sbjct: 453 GQFCERCSPGYRRETPGLGPYSPCVPCTCN--GHSET------CDPETGMCDCRDNTAGS 504
Query: 102 NCDQCEVGHY-NIISGEG--CKSCDCDPVGSLNRTCDPITGQ--CL-CRPGVTGTRCELC 155
+C++C G+Y + +G C+ C C P GS + P T + C C+ G TG RCELC
Sbjct: 505 HCEKCSDGYYGDATAGTALDCQPCPC-PGGS-SCAVVPRTKEVVCTSCQTGTTGKRCELC 562
Query: 156 QPNHYGFSL--DG----CKPCMC-DPIGSNSL-QCD-PSGQCPGVFMNRAEMSSD 201
++G L +G C+ C C D I N++ C+ +G+C N A D
Sbjct: 563 DDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGFYCD 617
Score = 194 (73.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 42/100 (42%), Positives = 54/100 (54%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD GQCSCKP V+G CD+C+ G +++ S GC+ C C+P GS C+ TG+C C+
Sbjct: 165 CDSY-GQCSCKPGVMGEKCDRCQPGFHSL-SEAGCRPCSCNPAGSTGE-CNMETGRCTCK 221
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F LD P SN C P
Sbjct: 222 DNVEGFHCERCKPGF--FHLD---P-------SNPRGCTP 249
Score = 160 (61.4 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 36/95 (37%), Positives = 46/95 (48%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
CSC G C++C G+ G G C C C+ G + TCDP TG C CR
Sbjct: 445 CSCPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCTCN--GH-SETCDPETGMCDCRDNT 501
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMCDPIGSN 178
G+ CE C +YG + G C+PC C P GS+
Sbjct: 502 AGSHCEKCSDGYYGDATAGTALDCQPCPC-PGGSS 535
Score = 155 (59.6 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L + + G C C G +CD C PG+ +L + C PC C
Sbjct: 151 LPCSCNPVGSLSTQCDSYGQC-SCKPGVMGEKCDRCQPGFH----SLSEAGCRPCSCNPA 205
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDC 124
G+ T C+ TG+C+CK +V G +C++C+ G +++ + GC C C
Sbjct: 206 GS------TGECNMETGRCTCKDNVEGFHCERCKPGFFHLDPSNPRGCTPCFC 252
Score = 86 (35.3 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 28 AGTTGDC------LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
AG+TG+C C N G C+ C PG+F + P+G C PC C+
Sbjct: 205 AGSTGECNMETGRCTCKDNVEGFHCERCKPGFFHLDPSNPRG-CTPCFCF 253
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 491 (177.9 bits), Expect = 1.9e-45, P = 1.9e-45
Identities = 84/159 (52%), Positives = 103/159 (64%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C C C GT+ +T C+Q+T
Sbjct: 845 TGECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTS---CNQVT 901
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C HV +C CE G +N+ SG GC+ CDC +GS N CD TGQC C+PGVTG
Sbjct: 902 GQCECLSHVTERDCSACEPGFFNLQSGRGCERCDCHALGSTNGQCDIWTGQCECQPGVTG 961
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
RC+ C+ NH+GF +GCKPC CDP GS +LQC G+C
Sbjct: 962 QRCDRCEANHFGFGPEGCKPCDCDPEGSRALQCREDGRC 1000
Score = 324 (119.1 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 69/183 (37%), Positives = 97/183 (53%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +++ G C C +NT G C+ CLP +F D A A +C PC C
Sbjct: 287 CNGHASECIRNELGKLV-C-NCKHNTFGDDCEKCLP-FFNDRPWRRATAESANECLPCDC 343
Query: 71 YIPGTLETETFTPVCDQLTGQ---C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C C+ + G +C++C Y + S EGC C C+P
Sbjct: 344 N--GRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSFYRLGSEEGCLPCSCNP 401
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD GQC C+PGV G +C+ CQP + S GC+PC C+P GS +C+ +
Sbjct: 402 VGSLSTQCDSY-GQCSCKPGVMGEKCDRCQPGFHSLSEAGCRPCSCNPAGSTG-ECNMET 459
Query: 186 GQC 188
G+C
Sbjct: 460 GRC 462
Score = 293 (108.2 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 63/162 (38%), Positives = 85/162 (52%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P ++ +S G G C+ C NT G C+ C ++ L +G C PC C G+
Sbjct: 350 CYFDP-ELYRST-GHGGHCMGCRDNTDGAHCERCRDSFY--RLGSEEG-CLPCSCNPVGS 404
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L T+ CD GQCSCKP V+G CD+C+ G +++ S GC+ C C+P GS C+
Sbjct: 405 LSTQ-----CDSY-GQCSCKPGVMGEKCDRCQPGFHSL-SEAGCRPCSCNPAGSTGE-CN 456
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD-----GCKPCMC 172
TG+C C+ V G CE C+P F LD GC PC C
Sbjct: 457 METGRCTCKDNVEGFHCERCKPGF--FHLDPSNPRGCTPCFC 496
Score = 291 (107.5 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 57/141 (40%), Positives = 75/141 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + C C PG+F L +G CE C C+ G+ + CD TG
Sbjct: 901 TGQC-ECLSHVTERDCSACEPGFFN--LQSGRG-CERCDCHALGSTNGQ-----CDIWTG 951
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P V G CD+CE H+ EGCK CDCDP GS C G+C C+ G G+
Sbjct: 952 QCECQPGVTGQRCDRCEANHFGF-GPEGCKPCDCDPEGSRALQCRE-DGRCECKEGFVGS 1009
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 1010 RCDQCEENYFYNRSWPGCQEC 1030
Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 61/179 (34%), Positives = 83/179 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C NT G C+ C GY+GDA A DC+PC C PG P ++
Sbjct: 736 TGMC-DCRDNTAGSHCEKCSDGYYGDATAGTALDCQPCPC--PGGSSCAV-VPRTKEVV- 790
Query: 91 QC-SCKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DP--VGSLNRTCDPIT 138
C SC+ G C+ C+ ++ GE C+ C C DP VG+ NR T
Sbjct: 791 -CTSCQTGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQ----T 845
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D C+ C C+P G+ + Q C+ +GQC
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLATNPADKCRACHCNPYGTVNQQTSCNQVTGQC 904
Score = 213 (80.0 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 60/175 (34%), Positives = 84/175 (48%)
Query: 43 GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C+ C PGY + L P C PC C G ET CD TG C C+ + G+
Sbjct: 697 GQFCERCSPGYRRETPGLGPYSPCVPCTCN--GHSET------CDPETGMCDCRDNTAGS 748
Query: 102 NCDQCEVGHY-NIISGEG--CKSCDCDPVGSLNRTCDPITGQ--CL-CRPGVTGTRCELC 155
+C++C G+Y + +G C+ C C P GS + P T + C C+ G TG RCELC
Sbjct: 749 HCEKCSDGYYGDATAGTALDCQPCPC-PGGS-SCAVVPRTKEVVCTSCQTGTTGKRCELC 806
Query: 156 QPNHYGFSL--DG----CKPCMC-DPIGSNSL-QCD-PSGQCPGVFMNRAEMSSD 201
++G L +G C+ C C D I N++ C+ +G+C N A D
Sbjct: 807 DDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCNRQTGECLKCIYNTAGFYCD 861
Score = 194 (73.4 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 42/100 (42%), Positives = 54/100 (54%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD GQCSCKP V+G CD+C+ G +++ S GC+ C C+P GS C+ TG+C C+
Sbjct: 409 CDSY-GQCSCKPGVMGEKCDRCQPGFHSL-SEAGCRPCSCNPAGSTGE-CNMETGRCTCK 465
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F LD P SN C P
Sbjct: 466 DNVEGFHCERCKPGF--FHLD---P-------SNPRGCTP 493
Score = 160 (61.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 36/95 (37%), Positives = 46/95 (48%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
CSC G C++C G+ G G C C C+ G + TCDP TG C CR
Sbjct: 689 CSCPAGYEGQFCERCSPGYRRETPGLGPYSPCVPCTCN--GH-SETCDPETGMCDCRDNT 745
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMCDPIGSN 178
G+ CE C +YG + G C+PC C P GS+
Sbjct: 746 AGSHCEKCSDGYYGDATAGTALDCQPCPC-PGGSS 779
Score = 155 (59.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L + + G C C G +CD C PG+ +L + C PC C
Sbjct: 395 LPCSCNPVGSLSTQCDSYGQC-SCKPGVMGEKCDRCQPGFH----SLSEAGCRPCSCNPA 449
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDC 124
G+ T C+ TG+C+CK +V G +C++C+ G +++ + GC C C
Sbjct: 450 GS------TGECNMETGRCTCKDNVEGFHCERCKPGFFHLDPSNPRGCTPCFC 496
Score = 86 (35.3 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 28 AGTTGDC------LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
AG+TG+C C N G C+ C PG+F + P+G C PC C+
Sbjct: 449 AGSTGECNMETGRCTCKDNVEGFHCERCKPGFFHLDPSNPRG-CTPCFCF 497
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 489 (177.2 bits), Expect = 3.2e-45, P = 3.2e-45
Identities = 85/176 (48%), Positives = 111/176 (63%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C+ C C GT++ ++ C+ +T
Sbjct: 845 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSS---CNPVT 901
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G YN+ SG+GCK C+C +GS N CD TGQC C+PG+TG
Sbjct: 902 GQCECLPHVTGRDCGACDPGFYNLQSGQGCKRCECHALGSTNGQCDVHTGQCECQPGITG 961
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP---GVFMNRAEMSSDD 202
CE C+ NH+GF +GCKPC C P G+ SLQC G+C G NR + ++
Sbjct: 962 QHCERCEVNHFGFGPEGCKPCDCHPEGALSLQCKDDGRCECREGFVGNRCDQCEEN 1017
Score = 307 (113.1 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 65/183 (35%), Positives = 97/183 (53%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +K+ C C +NT G C+ CLP +F D A A +C PC C
Sbjct: 287 CNGHASECVKNEFDKLV-C-NCKHNTYGVDCEKCLP-FFNDRPWRRATAESASECLPCDC 343
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C+ C+ + G NC++C ++ + + E C C C P
Sbjct: 344 N--GRSQECYFDPELYRSTGHGGHCTNCQDNTDGPNCERCRENYFRLGNREACSPCHCSP 401
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD G+C C+PGV G +C+ CQP ++ + GC+PC C+P GS +C+ +
Sbjct: 402 VGSLSTQCDSY-GRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSTD-ECNVET 459
Query: 186 GQC 188
G+C
Sbjct: 460 GRC 462
Score = 301 (111.0 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 60/160 (37%), Positives = 84/160 (52%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P ++ +S G G C C NT GP C+ C YF L + C PC C G+
Sbjct: 350 CYFDP-ELYRST-GHGGHCTNCQDNTDGPNCERCRENYF--RLGNREA-CSPCHCSPVGS 404
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L T+ CD G+CSCKP V+G CD+C+ G++++ GC+ C C+P GS + C+
Sbjct: 405 LSTQ-----CDSY-GRCSCKPGVMGDKCDRCQPGYHSLTEA-GCRPCSCNPSGSTDE-CN 456
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
TG+C+C+ V G CE C+P + GC PC C
Sbjct: 457 VETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC 496
Score = 292 (107.8 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 55/141 (39%), Positives = 79/141 (56%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + G C C PG++ L +G C+ C+C+ G+ + CD TG
Sbjct: 901 TGQC-ECLPHVTGRDCGACDPGFYN--LQSGQG-CKRCECHALGSTNGQ-----CDVHTG 951
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P + G +C++CEV H+ EGCK CDC P G+L+ C G+C CR G G
Sbjct: 952 QCECQPGITGQHCERCEVNHFGF-GPEGCKPCDCHPEGALSLQCKD-DGRCECREGFVGN 1009
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 1010 RCDQCEENYFYNRSWPGCQEC 1030
Score = 235 (87.8 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 61/179 (34%), Positives = 83/179 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C NT GP C+ C GY+GD+ DC+PC C PG P ++
Sbjct: 736 TGVC-NCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPCPC--PGGSSCAV-VPKTQEVV- 790
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DP--VGSLNRTCDPIT 138
C+ C G C+ C+ G++ G C+ C C DP VG+ NR +T
Sbjct: 791 -CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNR----LT 845
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D CK C C+P G+ Q C+P +GQC
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQC 904
Score = 211 (79.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 65/206 (31%), Positives = 92/206 (44%)
Query: 12 DILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQC 70
D+ L P V T + C GG C+ CL GY + +L P C C C
Sbjct: 669 DVTLASARPGP---GVPATWVESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTC 725
Query: 71 YIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYN---IISGEGCKSCDCDPV 127
G ET CD TG C+C+ + G +C++C G+Y + + C+ C C P
Sbjct: 726 N--GHSET------CDPETGVCNCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPCPC-PG 776
Query: 128 GSLNRTCDPITGQCLCR--P-GVTGTRCELCQPNHYGFSL--DG----CKPCMC-DPIGS 177
GS + P T + +C P G TG RCELC ++G L +G C+ C C D I
Sbjct: 777 GS-SCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDP 835
Query: 178 NSL-QCDP-SGQCPGVFMNRAEMSSD 201
N++ C+ +G+C N A D
Sbjct: 836 NAVGNCNRLTGECLKCIYNTAGFYCD 861
Score = 190 (71.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD G+CSCKP V+G CD+C+ G++++ GC+ C C+P GS + C+ TG+C+C+
Sbjct: 409 CDSY-GRCSCKPGVMGDKCDRCQPGYHSLTEA-GCRPCSCNPSGSTDE-CNVETGRCVCK 465
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F+L+ SN C P
Sbjct: 466 DNVEGFNCERCKPGF--FNLES----------SNPRGCTP 493
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 488 (176.8 bits), Expect = 3.5e-45, P = 3.5e-45
Identities = 86/176 (48%), Positives = 110/176 (62%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C C C GT++ ++ C+ +T
Sbjct: 724 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSS---CNPVT 780
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G YN+ SG+GC+ CDC +GS N CD TGQC C+PG+TG
Sbjct: 781 GQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITG 840
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP---GVFMNRAEMSSDD 202
CE C+ NH+GF +GCKPC C P GS SLQC G+C G NR + ++
Sbjct: 841 QHCEHCEVNHFGFGPEGCKPCDCHPEGSVSLQCKDDGRCECKQGFVGNRCDQCEEN 896
Score = 312 (114.9 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 66/183 (36%), Positives = 97/183 (53%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +K+ C C +NT G C+ CLP +F D A A +C PC C
Sbjct: 166 CNGHASECVKNEFDKLV-C-NCKHNTYGVDCEKCLP-FFNDRPWRRATAESASECLPCDC 222
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C+ C+ + G NC++C + ++S E C C C P
Sbjct: 223 N--GRSQECYFDPELYRSTGHGGHCTNCQGNTDGANCERCRENFFRLVSHEACSPCHCSP 280
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD G+C C+PGV G +C+ CQP ++ + GC+PC C+P GS +C+ +
Sbjct: 281 VGSLSTQCDSY-GRCSCKPGVMGEKCDRCQPGYHSLTEAGCRPCSCNPAGSID-ECNVET 338
Query: 186 GQC 188
G+C
Sbjct: 339 GRC 341
Score = 295 (108.9 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 58/160 (36%), Positives = 84/160 (52%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P ++ +S G G C C NT G C+ C +F L + C PC C G+
Sbjct: 229 CYFDP-ELYRST-GHGGHCTNCQGNTDGANCERCRENFF--RLVSHEA-CSPCHCSPVGS 283
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L T+ CD G+CSCKP V+G CD+C+ G++++ GC+ C C+P GS++ C+
Sbjct: 284 LSTQ-----CDSY-GRCSCKPGVMGEKCDRCQPGYHSLTEA-GCRPCSCNPAGSIDE-CN 335
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
TG+C+C+ V G CE C+P + GC PC C
Sbjct: 336 VETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC 375
Score = 290 (107.1 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 55/141 (39%), Positives = 77/141 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + G C C PG++ L +G CE C C+ G+ + CD TG
Sbjct: 780 TGQC-ECLPHVTGRDCGACDPGFYN--LQSGQG-CERCDCHALGSTNGQ-----CDIRTG 830
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P + G +C+ CEV H+ EGCK CDC P GS++ C G+C C+ G G
Sbjct: 831 QCECQPGITGQHCEHCEVNHFGF-GPEGCKPCDCHPEGSVSLQCKD-DGRCECKQGFVGN 888
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 889 RCDQCEENYFYNRSWPGCQEC 909
Score = 233 (87.1 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 60/179 (33%), Positives = 83/179 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C NT GP C+ C GY+GD+ DC+PC C PG P ++
Sbjct: 615 TGVC-DCRDNTAGPHCEKCSDGYYGDSTTGSSSDCQPCPC--PGGSSCAV-VPKTQEVV- 669
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDC----DP--VGSLNRTCDPIT 138
C+ C G C+ C+ G++ G C+ C C DP VG+ NR +T
Sbjct: 670 -CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNR----LT 724
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D C+ C C+P G+ Q C+P +GQC
Sbjct: 725 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACACNPYGTVKQQSSCNPVTGQC 783
Score = 208 (78.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 63/191 (32%), Positives = 86/191 (45%)
Query: 27 VAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVC 85
V T + C GG C+ CL GY + +L P C C C G ET C
Sbjct: 560 VPATWVESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTCN--GHSET------C 611
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNII---SGEGCKSCDCDPVGSLNRTCDPITGQCL 142
D TG C C+ + G +C++C G+Y S C+ C C P GS + P T + +
Sbjct: 612 DPETGVCDCRDNTAGPHCEKCSDGYYGDSTTGSSSDCQPCPC-PGGS-SCAVVPKTQEVV 669
Query: 143 CR--P-GVTGTRCELCQPNHYGFSL--DG----CKPCMC-DPIGSNSL-QCDP-SGQCPG 190
C P G TG RCELC ++G L +G C+ C C D I N++ C+ +G+C
Sbjct: 670 CTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLK 729
Query: 191 VFMNRAEMSSD 201
N A D
Sbjct: 730 CIYNTAGFYCD 740
Score = 195 (73.7 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD G+CSCKP V+G CD+C+ G++++ GC+ C C+P GS++ C+ TG+C+C+
Sbjct: 288 CDSY-GRCSCKPGVMGEKCDRCQPGYHSLTEA-GCRPCSCNPAGSIDE-CNVETGRCVCK 344
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F+L+ SN C P
Sbjct: 345 DNVEGFNCERCKPGF--FNLES----------SNPRGCTP 372
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 486 (176.1 bits), Expect = 6.6e-45, P = 6.6e-45
Identities = 86/176 (48%), Positives = 111/176 (63%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C+ C C GT++ ++ C+ +T
Sbjct: 844 TGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSS---CNPVT 900
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G YN+ SG+GC+SCDC +GS N CD TGQC C+PG+TG
Sbjct: 901 GQCQCLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGSTNGQCDIRTGQCECQPGITG 960
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP---GVFMNRAEMSSDD 202
CE C+ NH+GF +GCKPC C GS SLQC G+C G NR + ++
Sbjct: 961 QHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDDGRCECREGFVGNRCDQCEEN 1016
Score = 307 (113.1 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 66/183 (36%), Positives = 94/183 (51%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +K+ G C C +NT G C+ CLP +F D A A C PC C
Sbjct: 286 CNGHASECVKNEFGKLV-C-NCKHNTYGVDCEKCLP-FFNDRPWRRATAESANQCLPCDC 342
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C+ C+ + G C++C + + + E C C C P
Sbjct: 343 N--GRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSP 400
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD G+C C+PGV G +C+ CQP + + GC+PC CDP GS +C+ +
Sbjct: 401 VGSLSTQCDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSTD-ECNVET 458
Query: 186 GQC 188
G+C
Sbjct: 459 GRC 461
Score = 292 (107.8 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 59/160 (36%), Positives = 83/160 (51%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P ++ +S G G C C NT G +C+ C +F L + C PC C G+
Sbjct: 349 CYFDP-ELYRST-GHGGHCTNCRDNTDGAKCERCRENFF--RLGNTEA-CSPCHCSPVGS 403
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L T+ CD G+CSCKP V+G CD+C+ G +++ GC+ C CDP GS + C+
Sbjct: 404 LSTQ-----CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDPSGSTDE-CN 455
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
TG+C+C+ V G CE C+P + GC PC C
Sbjct: 456 VETGRCVCKDNVEGFSCERCKPGFFNLESSNPKGCTPCFC 495
Score = 287 (106.1 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 55/141 (39%), Positives = 76/141 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + G C C PG++ L +G CE C C+ G+ + CD TG
Sbjct: 900 TGQC-QCLPHVSGRDCGACDPGFYN--LQSGQG-CESCDCHALGSTNGQ-----CDIRTG 950
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P + G +C++CE H+ EGCK CDC GSL+ C G+C CR G G
Sbjct: 951 QCECQPGITGQHCERCETNHFGF-GPEGCKPCDCHHEGSLSLQCKD-DGRCECREGFVGN 1008
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 1009 RCDQCEENYFYNRSWPGCQEC 1029
Score = 237 (88.5 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 61/179 (34%), Positives = 85/179 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C NT GP C+ C GY+GD+ DC+PC C PG P ++
Sbjct: 735 TGVC-DCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPC--PGGSSC-AIVPKTKEVV- 789
Query: 91 QCS-CKPHVVGTNCDQCEVGHY-NIISGEG----CKSCDC----DP--VGSLNRTCDPIT 138
C+ C G C+ C+ G++ + + G C+ C C DP VG+ NR +T
Sbjct: 790 -CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNR----LT 844
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D CK C C+P G+ Q C+P +GQC
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQC 903
Score = 227 (85.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 64/191 (33%), Positives = 89/191 (46%)
Query: 27 VAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVC 85
V T + C GG C+TCLPGY + +L P C C C G ET C
Sbjct: 680 VPATWVESCTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCN--GHSET------C 731
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYN---IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
D TG C C+ + G +C++C G+Y + + C+ C C P GS + P T + +
Sbjct: 732 DPETGVCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPC-PGGS-SCAIVPKTKEVV 789
Query: 143 CR--P-GVTGTRCELCQPNHYGFSL--DG----CKPCMC-DPIGSNSL-QCDP-SGQCPG 190
C P G G RCELC ++G L +G C+PC C D I N++ C+ +G+C
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 849
Query: 191 VFMNRAEMSSD 201
N A D
Sbjct: 850 CIYNTAGFYCD 860
Score = 191 (72.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD G+CSCKP V+G CD+C+ G +++ GC+ C CDP GS + C+ TG+C+C+
Sbjct: 408 CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDPSGSTDE-CNVETGRCVCK 464
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F+L+ SN C P
Sbjct: 465 DNVEGFSCERCKPGF--FNLES----------SNPKGCTP 492
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 486 (176.1 bits), Expect = 6.6e-45, P = 6.6e-45
Identities = 85/176 (48%), Positives = 110/176 (62%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C C C GT++ ++ C+ +T
Sbjct: 845 TGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPYGTVKQQSS---CNPVT 901
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G YN+ SG+GC+ CDC +GS N CD +GQC C+PG+TG
Sbjct: 902 GQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDVHSGQCECQPGITG 961
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP---GVFMNRAEMSSDD 202
CE C+ NH+GF +GCKPC C P GS SLQC G+C G NR + ++
Sbjct: 962 QHCEHCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDQCEEN 1017
Score = 301 (111.0 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 64/183 (34%), Positives = 96/183 (52%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +K+ C C +NT G C+ CLP +F D A A +C+PC C
Sbjct: 287 CNGHASECVKNEFDKLV-C-NCKHNTYGVDCEKCLP-FFNDRPWRRATAESASECQPCDC 343
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C+ C+ + G C++C + + + E C C C P
Sbjct: 344 N--GRSQECYFDPELYRSTGHGGHCTNCQDNTDGAKCERCRENFFRLGNREACSPCHCSP 401
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD G+C C+PGV G +C+ CQP ++ + GC+PC C+P GS +C+ +
Sbjct: 402 VGSLSTQCDSY-GRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNPSGSID-ECNIET 459
Query: 186 GQC 188
G+C
Sbjct: 460 GRC 462
Score = 292 (107.8 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 56/141 (39%), Positives = 77/141 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + G C C PG++ L +G CE C C+ G+ + CD +G
Sbjct: 901 TGQC-ECLPHVTGRDCGACDPGFYN--LQSGQG-CERCDCHALGSTNGQ-----CDVHSG 951
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P + G +C+ CEV H+ EGCK CDC P GSL+ C G+C CR G G
Sbjct: 952 QCECQPGITGQHCEHCEVNHFGF-GPEGCKPCDCHPEGSLSLQCKD-DGRCECREGFVGN 1009
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 1010 RCDQCEENYFYNRSWPGCQEC 1030
Score = 292 (107.8 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 58/160 (36%), Positives = 85/160 (53%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P ++ +S G G C C NT G +C+ C +F L + C PC C G+
Sbjct: 350 CYFDP-ELYRST-GHGGHCTNCQDNTDGAKCERCRENFF--RLGNREA-CSPCHCSPVGS 404
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L T+ CD G+CSCKP V+G CD+C+ G++++ GC+ C C+P GS++ C+
Sbjct: 405 LSTQ-----CDSY-GRCSCKPGVMGDKCDRCQPGYHSLTEA-GCRPCSCNPSGSIDE-CN 456
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
TG+C+C+ V G CE C+P + GC PC C
Sbjct: 457 IETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFC 496
Score = 235 (87.8 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 61/179 (34%), Positives = 86/179 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C NT GP C+ C GY+GD+ A DC+PC C PG P ++
Sbjct: 736 SGVC-NCRDNTAGPNCEKCSDGYYGDSTAGTSLDCQPCPC--PGGSSCAV-VPKTQEVV- 790
Query: 91 QCS-CKPHVVGTNCDQCEVGHY-NIISGEG----CKSCDC----DP--VGSLNRTCDPIT 138
C+ C G C+ C+ GH+ + + G C+ C C DP VG+ NR +T
Sbjct: 791 -CTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCNDNIDPNAVGNCNR----LT 845
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D C+ C C+P G+ Q C+P +GQC
Sbjct: 846 GECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCRACDCNPYGTVKQQSSCNPVTGQC 904
Score = 217 (81.4 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 67/206 (32%), Positives = 93/206 (45%)
Query: 12 DILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQC 70
D+ L P V T + C GG C+ CL GY + +L P C C C
Sbjct: 669 DVTLASAHPGP---GVPATWVESCTCPVGYGGQFCEVCLSGYRRETPSLGPYSPCVLCTC 725
Query: 71 YIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEG--CKSCDCDPV 127
G ET CD +G C+C+ + G NC++C G+Y + +G C+ C C P
Sbjct: 726 N--GHSET------CDPESGVCNCRDNTAGPNCEKCSDGYYGDSTAGTSLDCQPCPC-PG 776
Query: 128 GSLNRTCDPITGQCLCR--P-GVTGTRCELCQPNHYGFSL--DG----CKPCMC-DPIGS 177
GS + P T + +C P G TG RCELC H+G L +G C+ C C D I
Sbjct: 777 GS-SCAVVPKTQEVVCTNCPTGTTGRRCELCDDGHFGDPLGSNGPVRLCRLCQCNDNIDP 835
Query: 178 NSL-QCDP-SGQCPGVFMNRAEMSSD 201
N++ C+ +G+C N A D
Sbjct: 836 NAVGNCNRLTGECLKCIYNTAGFYCD 861
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD G+CSCKP V+G CD+C+ G++++ GC+ C C+P GS++ C+ TG+C+C+
Sbjct: 409 CDSY-GRCSCKPGVMGDKCDRCQPGYHSLTEA-GCRPCSCNPSGSIDE-CNIETGRCVCK 465
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F+L+ SN C P
Sbjct: 466 DNVEGFNCERCKPGF--FNLES----------SNPRGCTP 493
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 484 (175.4 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 85/176 (48%), Positives = 111/176 (63%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G CD C G+FG+ LA P C+ C C GT++ ++ C+ +T
Sbjct: 844 TGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSS---CNPVT 900
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C PHV G +C C+ G+YN+ SG+GC+ CDC +GS N CD TGQC C+PG+TG
Sbjct: 901 GQCQCLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITG 960
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP---GVFMNRAEMSSDD 202
CE C+ NH+GF +GCKPC C GS SLQC G+C G NR + ++
Sbjct: 961 QHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDDGRCECREGFVGNRCDQCEEN 1016
Score = 295 (108.9 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 57/141 (40%), Positives = 77/141 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ + G C TC PGY+ L +G CE C C+ G+ + CD TG
Sbjct: 900 TGQC-QCLPHVSGRDCGTCDPGYYN--LQSGQG-CERCDCHALGSTNGQ-----CDIRTG 950
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P + G +C++CE H+ EGCK CDC GSL+ C G+C CR G G
Sbjct: 951 QCECQPGITGQHCERCETNHFGF-GPEGCKPCDCHHEGSLSLQCKD-DGRCECREGFVGN 1008
Query: 151 RCELCQPNH-YGFSLDGCKPC 170
RC+ C+ N+ Y S GC+ C
Sbjct: 1009 RCDQCEENYFYNRSWPGCQEC 1029
Score = 282 (104.3 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 58/160 (36%), Positives = 82/160 (51%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P ++ +S G G C C NT G +C+ C +F L + C PC C G+
Sbjct: 349 CYFDP-ELYRST-GHGGHCTNCRDNTDGAKCERCRENFF--RLGNTEA-CSPCHCSPVGS 403
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L T+ CD G+CSCKP V+G CD+C+ G +++ GC+ C CD GS + C+
Sbjct: 404 LSTQ-----CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDLRGSTDE-CN 455
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
TG+C+C+ V G CE C+P + GC PC C
Sbjct: 456 VETGRCVCKDNVEGFNCERCKPGFFNLESSNPKGCTPCFC 495
Score = 281 (104.0 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 63/183 (34%), Positives = 92/183 (50%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ +K+ C C +NT G C+ CLP +F D A A + PC C
Sbjct: 286 CNGHASECVKNEFDKLM-C-NCKHNTYGVDCEKCLP-FFNDRPWRRATAESASESLPCDC 342
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G + F P + TG C+ C+ + G C++C + + + E C C C P
Sbjct: 343 N--GRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSP 400
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PS 185
VGSL+ CD G+C C+PGV G +C+ CQP + + GC+PC CD GS +C+ +
Sbjct: 401 VGSLSTQCDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDLRGSTD-ECNVET 458
Query: 186 GQC 188
G+C
Sbjct: 459 GRC 461
Score = 237 (88.5 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 61/179 (34%), Positives = 85/179 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C NT GP C+ C GY+GD+ DC+PC C PG P ++
Sbjct: 735 TGVC-DCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPC--PGGSSC-AIVPKTKEVV- 789
Query: 91 QCS-CKPHVVGTNCDQCEVGHY-NIISGEG----CKSCDC----DP--VGSLNRTCDPIT 138
C+ C G C+ C+ G++ + + G C+ C C DP VG+ NR +T
Sbjct: 790 -CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNR----LT 844
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
G+CL C G C+ C+ +G L D CK C C+P G+ Q C+P +GQC
Sbjct: 845 GECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQC 903
Score = 227 (85.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 64/191 (33%), Positives = 89/191 (46%)
Query: 27 VAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVC 85
V T + C GG C+TCLPGY + +L P C C C G ET C
Sbjct: 680 VPATWVESCTCPVGYGGQFCETCLPGYRRETPSLGPYSPCVLCTCN--GHSET------C 731
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYN---IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
D TG C C+ + G +C++C G+Y + + C+ C C P GS + P T + +
Sbjct: 732 DPETGVCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPC-PGGS-SCAIVPKTKEVV 789
Query: 143 CR--P-GVTGTRCELCQPNHYGFSL--DG----CKPCMC-DPIGSNSL-QCDP-SGQCPG 190
C P G G RCELC ++G L +G C+PC C D I N++ C+ +G+C
Sbjct: 790 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 849
Query: 191 VFMNRAEMSSD 201
N A D
Sbjct: 850 CIYNTAGFYCD 860
Score = 181 (68.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD G+CSCKP V+G CD+C+ G +++ GC+ C CD GS + C+ TG+C+C+
Sbjct: 408 CDSY-GRCSCKPGVMGDKCDRCQPGFHSLTEA-GCRPCSCDLRGSTDE-CNVETGRCVCK 464
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
V G CE C+P F+L+ SN C P
Sbjct: 465 DNVEGFNCERCKPGF--FNLES----------SNPKGCTP 492
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 459 (166.6 bits), Expect = 4.9e-42, P = 4.9e-42
Identities = 80/176 (45%), Positives = 106/176 (60%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL+C++NT G C+ C G++GDALA LP+ C PC C G++ + P CD +T
Sbjct: 835 TGHCLRCLHNTTGAHCERCQEGFYGDALASLPEDKCVPCSCNPGGSVGEQQ--P-CDLVT 891
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQCSC PHV G +C C G Y++ G GC+SC C P+GS C P TGQC CRPGV G
Sbjct: 892 GQCSCLPHVTGRDCGHCSPGFYDLQPGRGCRSCKCHPLGSQEDQCHPKTGQCPCRPGVEG 951
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC---PGVFMNRAEMSSDD 202
C+ CQ +GFS+ GC+ C C P+G+ S QC + C PG + + D+
Sbjct: 952 QSCDRCQLGFFGFSIRGCRACRCSPLGAASAQCHENSTCVCRPGFVGYKCDRCQDN 1007
Score = 307 (113.1 bits), Expect = 7.6e-26, P = 7.6e-26
Identities = 68/184 (36%), Positives = 92/184 (50%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ G C +C +NT GP C+ CLP +F D A +C PC C
Sbjct: 279 CNGHASECGPDEEGQLA-C-RCQHNTTGPDCERCLP-FFQDRPWARGTAEAANECLPCNC 335
Query: 71 YIPGTLETETFTPVCDQLTG---QC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G E F + +G +C C+ H G +C++C+ Y C+ CDC P
Sbjct: 336 --SGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENFYRWNPQMPCQPCDCHP 393
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GSL+ CD +G C C+P VTG +C+ CQP + S GC+PC C+ GS CDP S
Sbjct: 394 AGSLHLQCDD-SGTCKCKPTVTGWKCDRCQPGFHSLSEGGCRPCTCNSAGSLGT-CDPRS 451
Query: 186 GQCP 189
G+CP
Sbjct: 452 GRCP 455
Score = 289 (106.8 bits), Expect = 6.3e-24, P = 6.3e-24
Identities = 54/148 (36%), Positives = 78/148 (52%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
+G G CL C +T GP C+ C ++ +P C+PC C+ G+L + CD
Sbjct: 352 SGHGGRCLHCRDHTAGPHCERCQENFYRWNPQMP---CQPCDCHPAGSLHLQ-----CDD 403
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+G C CKP V G CD+C+ G +++ G GC+ C C+ GSL TCDP +G+C C+ V
Sbjct: 404 -SGTCKCKPTVTGWKCDRCQPGFHSLSEG-GCRPCTCNSAGSLG-TCDPRSGRCPCKENV 460
Query: 148 TGTRCELCQPNHYGFSLD---GCKPCMC 172
G C+ C+P + GC C C
Sbjct: 461 EGNLCDRCRPGTFNLQPHNPAGCSSCFC 488
Score = 279 (103.3 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 69/177 (38%), Positives = 89/177 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C ++T GP C+ CLPG++G+ DC+PC C PG T P ++
Sbjct: 726 TGICL-CGHHTEGPSCERCLPGFYGNPFTGQADDCQPCPC--PGQSACTTM-PESGEVV- 780
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNI---ISG--EGCKSCDC----DPVGSLNRTCDPITGQ 140
C+ C P G C+ C+ G + +SG + C+ C C DP N CDP+TG
Sbjct: 781 -CTHCPPGQRGQRCEICDDGFFGDPLGLSGAPQPCRPCQCSGNVDPNAVGN--CDPLTGH 837
Query: 141 CL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CD-PSGQC 188
CL C TG CE CQ YG +L D C PC C+P GS Q CD +GQC
Sbjct: 838 CLRCLHNTTGAHCERCQEGFYGDALASLPEDKCVPCSCNPGGSVGEQQPCDLVTGQC 894
Score = 253 (94.1 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 49/142 (34%), Positives = 74/142 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ + G C C PG++ P C C+C+ G+ E + C TG
Sbjct: 891 TGQC-SCLPHVTGRDCGHCSPGFYD---LQPGRGCRSCKCHPLGSQEDQ-----CHPKTG 941
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P V G +CD+C++G + S GC++C C P+G+ + C C+CRPG G
Sbjct: 942 QCPCRPGVEGQSCDRCQLGFFGF-SIRGCRACRCSPLGAASAQCHE-NSTCVCRPGFVGY 999
Query: 151 RCELCQPNHYGFSLDG--CKPC 170
+C+ CQ N + + G C+ C
Sbjct: 1000 KCDRCQDNFFP-TAGGTYCQQC 1020
Score = 222 (83.2 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 62/188 (32%), Positives = 89/188 (47%)
Query: 17 VGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA-LALPKGDCEPCQCYIPGT 75
+GPP+ +++ + +G Y+ G C++C PGY + L P C PC C GT
Sbjct: 670 LGPPASWVETCSCPSG------YS--GQFCESCAPGYKRETPLGGPYASCVPCICNQHGT 721
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEG--CKSCDCDPVGSLNR 132
CD TG C C H G +C++C G Y N +G+ C+ C C P G
Sbjct: 722 ---------CDPNTGICLCGHHTEGPSCERCLPGFYGNPFTGQADDCQPCPC-P-GQSAC 770
Query: 133 TCDPITGQCLCR---PGVTGTRCELCQPNHYG--FSLDG----CKPCMCDP-IGSNSL-Q 181
T P +G+ +C PG G RCE+C +G L G C+PC C + N++
Sbjct: 771 TTMPESGEVVCTHCPPGQRGQRCEICDDGFFGDPLGLSGAPQPCRPCQCSGNVDPNAVGN 830
Query: 182 CDP-SGQC 188
CDP +G C
Sbjct: 831 CDPLTGHC 838
Score = 175 (66.7 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 40/111 (36%), Positives = 54/111 (48%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P+ L +G C KC G +CD C PG+ +L +G C PC C G+
Sbjct: 389 CDCHPAGSLHLQCDDSGTC-KCKPTVTGWKCDRCQPGFH----SLSEGGCRPCTCNSAGS 443
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDC 124
L T CD +G+C CK +V G CD+C G +N+ + GC SC C
Sbjct: 444 LGT------CDPRSGRCPCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFC 488
Score = 147 (56.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 45/125 (36%), Positives = 55/125 (44%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNI--ISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
CSC G C+ C G+ + G C C C+ G TCDP TG CLC
Sbjct: 680 CSCPSGYSGQFCESCAPGYKRETPLGGPYASCVPCICNQHG----TCDPNTGICLCGHHT 735
Query: 148 TGTRCELCQPNHYG--FS--LDGCKPCMCDPIGSNSLQCDP-SGQ--C----PGVFMNRA 196
G CE C P YG F+ D C+PC C P G ++ P SG+ C PG R
Sbjct: 736 EGPSCERCLPGFYGNPFTGQADDCQPCPC-P-GQSACTTMPESGEVVCTHCPPGQRGQRC 793
Query: 197 EMSSD 201
E+ D
Sbjct: 794 EICDD 798
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 454 (164.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 77/176 (43%), Positives = 107/176 (60%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G CL+C+YNT G C+ C G++G A+A P C PC C + G++ +T C+ +T
Sbjct: 840 SGHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKT----CNPVT 895
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C P+V G +C +C G Y++ SG GC+SC C P+GSL C P TGQC CRPGVTG
Sbjct: 896 GQCVCLPYVSGRDCSRCSPGFYDLQSGRGCQSCKCHPLGSLENKCHPKTGQCPCRPGVTG 955
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC---PGVFMNRAEMSSDD 202
C+ CQ +GFS+ GC+ C C P+G+ S QC + C PG + + D+
Sbjct: 956 QACDRCQLGFFGFSIKGCRDCRCSPLGAASSQCHENSTCVCRPGFVGYKCDRCQDN 1011
Score = 312 (114.9 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 70/184 (38%), Positives = 92/184 (50%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ + AG C +C +NT G C+ CLP +F D A +C PC C
Sbjct: 282 CNGHASECEPNAAGQLA-C-RCQHNTTGVDCERCLP-FFQDRPWARGTAEDANECLPCNC 338
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G E TF + TG C C+ H G +C++CE +Y C+ CDC P
Sbjct: 339 --SGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCHP 396
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GSL+ CD +G C C+P VTG +C+ C P + S GC+PC C+ GS CDP S
Sbjct: 397 AGSLSLQCDN-SGVCPCKPTVTGWKCDRCLPGFHSLSEGGCRPCACNVAGSLGT-CDPRS 454
Query: 186 GQCP 189
G CP
Sbjct: 455 GNCP 458
Score = 288 (106.4 bits), Expect = 8.0e-24, P = 8.0e-24
Identities = 58/160 (36%), Positives = 83/160 (51%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G G C +C +T GP C+ C Y+ + PK C+PC C+ G+L + CD
Sbjct: 356 GHGGHCQRCRDHTTGPHCERCEKNYYRWS---PKTPCQPCDCHPAGSLSLQ-----CDN- 406
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
+G C CKP V G CD+C G +++ G GC+ C C+ GSL TCDP +G C C+ V
Sbjct: 407 SGVCPCKPTVTGWKCDRCLPGFHSLSEG-GCRPCACNVAGSLG-TCDPRSGNCPCKENVE 464
Query: 149 GTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPS 185
G+ C+ C+P + GC C C G + + C P+
Sbjct: 465 GSLCDRCRPGTFNLQPHNPVGCSSCFC--YGHSKV-CSPA 501
Score = 279 (103.3 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 66/174 (37%), Positives = 89/174 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C ++T GP C+ C+PG++G+A + DC+PC C PG T D +
Sbjct: 731 TGICL-CGHHTEGPSCERCMPGFYGNAFSGRADDCQPCPC--PGQSACATIPESGDVV-- 785
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNI---ISG--EGCKSCDCDPVGSLNRT--CDPITGQCL 142
C+ C P G C+ CE G + +SG + C+ C C LN CDP +G CL
Sbjct: 786 -CTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHSGHCL 844
Query: 143 -CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ-CDP-SGQC 188
C TG CE C+ YG ++ D C PC CD GS S + C+P +GQC
Sbjct: 845 RCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQC 898
Score = 274 (101.5 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 53/147 (36%), Positives = 79/147 (53%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
K+ TG C+ C+ G C C PG++ L +G C+ C+C+ G+LE +
Sbjct: 889 KTCNPVTGQCV-CLPYVSGRDCSRCSPGFYD--LQSGRG-CQSCKCHPLGSLENK----- 939
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
C TGQC C+P V G CD+C++G + S +GC+ C C P+G+ + C C+CR
Sbjct: 940 CHPKTGQCPCRPGVTGQACDRCQLGFFGF-SIKGCRDCRCSPLGAASSQCHE-NSTCVCR 997
Query: 145 PGVTGTRCELCQPNHYGFSLD-GCKPC 170
PG G +C+ CQ N + D GC+ C
Sbjct: 998 PGFVGYKCDRCQDNFFLADGDTGCQEC 1024
Score = 200 (75.5 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 64/197 (32%), Positives = 83/197 (42%)
Query: 8 VSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL-ALPKGDCE 66
V + ++ L P L A CL C G C+ C GY + P +C
Sbjct: 659 VLLCEVQLTSAWPQRELAPPASWVETCL-CPQGYTGQFCEFCALGYKREIPHGGPYANCI 717
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISG--EGCKSCD 123
PC C GT CD TG C C H G +C++C G Y N SG + C+ C
Sbjct: 718 PCTCNQHGT---------CDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGRADDCQPCP 768
Query: 124 CDPVGSLNRTCDPITGQCLCR---PGVTGTRCELCQPNHYG--FSLDG----CKPCMCDP 174
C P S T P +G +C PG G RCE C+ +G L G C+ C C
Sbjct: 769 C-PGQSACATI-PESGDVVCTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSG 826
Query: 175 -IGSNSL-QCDP-SGQC 188
+ N++ CDP SG C
Sbjct: 827 NVDLNAVGNCDPHSGHC 843
Score = 150 (57.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 46/125 (36%), Positives = 53/125 (42%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C C G C+ C +G+ I G C C C+ G TCDP TG CLC
Sbjct: 685 CLCPQGYTGQFCEFCALGYKREIPHGGPYANCIPCTCNQHG----TCDPNTGICLCGHHT 740
Query: 148 TGTRCELCQPNHYG--FS--LDGCKPCMCDPIGSNSLQCDP-SGQ--C----PGVFMNRA 196
G CE C P YG FS D C+PC C P G ++ P SG C PG R
Sbjct: 741 EGPSCERCMPGFYGNAFSGRADDCQPCPC-P-GQSACATIPESGDVVCTHCPPGQRGRRC 798
Query: 197 EMSSD 201
E D
Sbjct: 799 ESCED 803
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 451 (163.8 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 74/159 (46%), Positives = 100/159 (62%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G CL+C++NT G C+ C G++G ALA P C PC C+ G++ + P CD +T
Sbjct: 828 SGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQM--P-CDPVT 884
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQCSC PHV +C +C G +++ G GC+SC C P+GS C P TGQC CRPGVTG
Sbjct: 885 GQCSCLPHVTARDCSRCYPGFFDLQPGRGCRSCKCHPLGSQEDQCHPKTGQCTCRPGVTG 944
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C+ CQ +GFS+ GC+ C C P+G+ S QC +G C
Sbjct: 945 QACDRCQLGFFGFSIKGCRACRCSPLGAASAQCHENGTC 983
Score = 318 (117.0 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 71/184 (38%), Positives = 94/184 (51%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ VAG C +C +NT G C+ CLP +F D A +C PC C
Sbjct: 273 CNGHASECGPDVAGQLA-C-RCQHNTTGTDCERCLP-FFQDRPWARGTAEAAHECLPCNC 329
Query: 71 YIPGTLETETFTPVCDQLTG---QCS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G E TF + TG +C C+ H G +C++C+ Y+ C+ CDC
Sbjct: 330 --SGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRMPCQPCDCQS 387
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GSL+ CD TG C C+P VTG +C+ C P + S GC+PC C+P GS CDP S
Sbjct: 388 AGSLHLQCDD-TGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLDT-CDPRS 445
Query: 186 GQCP 189
G+CP
Sbjct: 446 GRCP 449
Score = 290 (107.1 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 57/155 (36%), Positives = 82/155 (52%)
Query: 22 DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETET 80
++ +S G G C C +T GP C+ C ++ D P+ C+PC C G+L +
Sbjct: 341 ELFRST-GHGGRCHHCRDHTAGPHCERCQENFYHWD----PRMPCQPCDCQSAGSLHLQ- 394
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
CD TG C+CKP V G CD+C G +++ G GC+ C C+P GSL+ TCDP +G+
Sbjct: 395 ----CDD-TGTCACKPTVTGWKCDRCLPGFHSLSEG-GCRPCTCNPAGSLD-TCDPRSGR 447
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C C+ V G C+ C+P + GC C C
Sbjct: 448 CPCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFC 482
Score = 284 (105.0 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 69/177 (38%), Positives = 88/177 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C ++T GP C+ CLPG++G+ A DC+PC C PG T P ++
Sbjct: 719 TGICV-CSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC--PGQSACTTI-PESREVV- 773
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDC----DPVGSLNRTCDPITGQ 140
C+ C P G C+ C+ G + G + C C C DP N CDP++G
Sbjct: 774 -CTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGN--CDPLSGH 830
Query: 141 CL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ--CDP-SGQC 188
CL C TG CE CQ YG +L D C PC C P GS S Q CDP +GQC
Sbjct: 831 CLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQC 887
Score = 264 (98.0 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 50/142 (35%), Positives = 75/142 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ + C C PG+F P C C+C+ G+ E + C TG
Sbjct: 884 TGQC-SCLPHVTARDCSRCYPGFFD---LQPGRGCRSCKCHPLGSQEDQ-----CHPKTG 934
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC+C+P V G CD+C++G + S +GC++C C P+G+ + C G C+CRPG G
Sbjct: 935 QCTCRPGVTGQACDRCQLGFFGF-SIKGCRACRCSPLGAASAQCHE-NGTCVCRPGFEGY 992
Query: 151 RCELCQPNHYGFSLDG--CKPC 170
+C+ C N + + DG C+ C
Sbjct: 993 KCDRCHDNFF-LTADGTHCQQC 1013
Score = 199 (75.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 58/170 (34%), Positives = 75/170 (44%)
Query: 37 CIYNTG--GPQCDTCLPGYFGDA-LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG G C++C PGY + P C PC C GT CD TG C
Sbjct: 673 CSCPTGYTGQFCESCAPGYKREMPQGGPYASCVPCTCNQHGT---------CDPNTGICV 723
Query: 94 CKPHVVGTNCDQCEVGHY-NIISGEG--CKSCDCDPVGSLNRTCDPITGQCLCR---PGV 147
C H G +C++C G Y N +G+ C+ C C P G T P + + +C PG
Sbjct: 724 CSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPC-P-GQSACTTIPESREVVCTHCPPGQ 781
Query: 148 TGTRCELCQPNHYG--FSLDG----CKPCMCDP-IGSNSL-QCDP-SGQC 188
G RCE+C +G L G C C C + N++ CDP SG C
Sbjct: 782 RGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVDPNAVGNCDPLSGHC 831
Score = 147 (56.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 42/125 (33%), Positives = 53/125 (42%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
CSC G C+ C G+ + G C C C+ G TCDP TG C+C
Sbjct: 673 CSCPTGYTGQFCESCAPGYKREMPQGGPYASCVPCTCNQHG----TCDPNTGICVCSHHT 728
Query: 148 TGTRCELCQPNHYG--FS--LDGCKPCMCDPIGSNSLQCDPSGQ---C----PGVFMNRA 196
G CE C P YG F+ D C+PC C P G ++ P + C PG R
Sbjct: 729 EGPSCERCLPGFYGNPFAGQADDCQPCPC-P-GQSACTTIPESREVVCTHCPPGQRGRRC 786
Query: 197 EMSSD 201
E+ D
Sbjct: 787 EVCDD 791
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 444 (161.4 bits), Expect = 3.8e-41, Sum P(2) = 3.8e-41
Identities = 77/176 (43%), Positives = 104/176 (59%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G CL+C++NT G C+ C G++G ALA P C PC C G+ +T C+ T
Sbjct: 840 SGRCLRCLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGSSSQKT----CNPAT 895
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC+C P+V G +C +C G Y++ G GC+SC C PVGSL C P TGQC CRPGVTG
Sbjct: 896 GQCACLPYVTGRDCSRCSPGFYDLQPGRGCQSCKCHPVGSLENKCHPKTGQCPCRPGVTG 955
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC---PGVFMNRAEMSSDD 202
C+ CQ +GFS+ GC+ C C P+G+ S QC + C PG + + D+
Sbjct: 956 QACDRCQLGFFGFSIKGCRDCRCSPLGAASPQCHENSTCVCRPGFVGYKCDRCQDN 1011
Score = 303 (111.7 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 69/174 (39%), Positives = 92/174 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C ++T GP C+ C+PG++G+A + DC+PC C PG T D +
Sbjct: 731 TGICL-CGHHTEGPSCERCMPGFYGNAFSGHADDCQPCPC--PGQSACTTIPESRDVV-- 785
Query: 91 QCS-CKPHVVGTNCDQCEVGHYNI---ISG--EGCKSCDCDPVGSLNRT--CDPITGQCL 142
C+ C P G C+ CE G + +SG + C+ C C LN CDP +G+CL
Sbjct: 786 -CTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRNVDLNAVGNCDPHSGRCL 844
Query: 143 -CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQ-CDPS-GQC 188
C TG CE CQ YG +L D C PC CDP GS+S + C+P+ GQC
Sbjct: 845 RCLHNTTGAHCEHCQEGFYGSALATRPADKCAPCSCDPRGSSSQKTCNPATGQC 898
Score = 291 (107.5 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 69/184 (37%), Positives = 88/184 (47%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S + AG C C +NT G C+ CLP +F D A +C PC C
Sbjct: 282 CNGHASACGPNEAGQLA-C-HCQHNTTGVDCERCLP-FFQDRPWARGTAEDANECLPCNC 338
Query: 71 YIPGTLETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G E TF + TG C C+ H G +C+ CE +Y C+ CDC P
Sbjct: 339 --SGHSEECTFDRELYRSTGHGGHCQRCRDHTAGPHCEHCEKNYYRWDPKTPCQPCDCHP 396
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GSL+ CD +G C C+ VTG +C+ C P + S GC+PC C+ GS CDP S
Sbjct: 397 AGSLSLQCDN-SGTCPCKLTVTGWKCDRCLPGFHSLSEGGCRPCTCNVAGSLGT-CDPRS 454
Query: 186 GQCP 189
G CP
Sbjct: 455 GNCP 458
Score = 274 (101.5 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 58/161 (36%), Positives = 81/161 (50%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
G G C +C +T GP C+ C Y+ D PK C+PC C+ G+L + CD
Sbjct: 356 GHGGHCQRCRDHTAGPHCEHCEKNYYRWD----PKTPCQPCDCHPAGSLSLQ-----CDN 406
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+G C CK V G CD+C G +++ G GC+ C C+ GSL TCDP +G C C+ V
Sbjct: 407 -SGTCPCKLTVTGWKCDRCLPGFHSLSEG-GCRPCTCNVAGSLG-TCDPRSGNCPCKENV 463
Query: 148 TGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPS 185
G C+ C+P + GC C C G + + C P+
Sbjct: 464 EGGLCDRCRPGTFNLQPHNPAGCSSCFC--YGHSKV-CAPA 501
Score = 270 (100.1 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 52/147 (35%), Positives = 76/147 (51%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
K+ TG C C+ G C C PG++ P C+ C+C+ G+LE +
Sbjct: 889 KTCNPATGQCA-CLPYVTGRDCSRCSPGFYD---LQPGRGCQSCKCHPVGSLENK----- 939
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
C TGQC C+P V G CD+C++G + S +GC+ C C P+G+ + C C+CR
Sbjct: 940 CHPKTGQCPCRPGVTGQACDRCQLGFFGF-SIKGCRDCRCSPLGAASPQCHE-NSTCVCR 997
Query: 145 PGVTGTRCELCQPNHYGFSLD-GCKPC 170
PG G +C+ CQ N + D GC+ C
Sbjct: 998 PGFVGYKCDRCQDNFFLVDGDTGCQEC 1024
Score = 202 (76.2 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 61/196 (31%), Positives = 81/196 (41%)
Query: 7 HVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL-ALPKGDC 65
HV + ++ L P L A CL C G C+ C GY + P +C
Sbjct: 658 HVLLCEVHLTSARPQRGLAPPASWVETCL-CPQGYTGQFCEFCALGYKREIPHGGPYTNC 716
Query: 66 EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISG--EGCKSC 122
PC C GT CD TG C C H G +C++C G Y N SG + C+ C
Sbjct: 717 IPCTCNQHGT---------CDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGHADDCQPC 767
Query: 123 DCDPVGSLNRTCDPITGQCL-CRPGVTGTRCELCQPNHYG--FSLDG----CKPCMCDP- 174
C + + C C PG G RCE C+ +G L G C+ C C
Sbjct: 768 PCPGQSACTTIPESRDVVCTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSRN 827
Query: 175 IGSNSL-QCDP-SGQC 188
+ N++ CDP SG+C
Sbjct: 828 VDLNAVGNCDPHSGRC 843
Score = 188 (71.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 44/126 (34%), Positives = 61/126 (48%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P+ L +G C C G +CD CLPG+ +L +G C PC C + G+
Sbjct: 392 CDCHPAGSLSLQCDNSGTC-PCKLTVTGWKCDRCLPGFH----SLSEGGCRPCTCNVAGS 446
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRT 133
L T CD +G C CK +V G CD+C G +N+ + GC SC C G ++
Sbjct: 447 LGT------CDPRSGNCPCKENVEGGLCDRCRPGTFNLQPHNPAGCSSCFC--YGH-SKV 497
Query: 134 CDPITG 139
C P +G
Sbjct: 498 CAPASG 503
Score = 37 (18.1 bits), Expect = 3.8e-41, Sum P(2) = 3.8e-41
Identities = 12/34 (35%), Positives = 12/34 (35%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTC 49
C PP D V G G GPQC C
Sbjct: 63 CGQPPEDFCPHV-GAPG---------AGPQCQRC 86
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 449 (163.1 bits), Expect = 4.9e-41, P = 4.9e-41
Identities = 78/160 (48%), Positives = 100/160 (62%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGT-LETETFTPVCDQL 88
+G CL+C++NT G QC C PG++GDALA P G C C C G+ L E CD
Sbjct: 832 SGRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEG----CDPG 887
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQC C PHV+G C C+ G+Y + + GCKSC+C PVGS + C +TGQC C+PGVT
Sbjct: 888 TGQCLCLPHVLGRTCGLCQHGYYGLQAAVGCKSCECHPVGSQDSGCHAVTGQCSCQPGVT 947
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
G RC+ C+ +GFS GC+ C C P+GS S QC + C
Sbjct: 948 GLRCDRCEHGFFGFSARGCRACNCSPLGSASAQCHENSTC 987
Score = 290 (107.1 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 54/147 (36%), Positives = 77/147 (52%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G G C C NT GP+C+ C ++ + C+PC C+ G P CD
Sbjct: 347 GRGGHCRNCRDNTAGPRCEQCRQNHYRWE---QQAACQPCHCHPAGV----PLRPQCDS- 398
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
+G C+CK +V G C++C+ G++++ G GC+ C CDP GS+ TCDP TG C C+ V
Sbjct: 399 SGTCTCKANVTGWKCERCKDGYHSLSEG-GCRPCTCDPAGSVG-TCDPNTGHCTCKERVE 456
Query: 149 GTRCELCQPNHYG---FSLDGCKPCMC 172
G C CQP + ++ GC C C
Sbjct: 457 GHLCNRCQPGWFNLQPYNPIGCTSCFC 483
Score = 282 (104.3 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 54/141 (38%), Positives = 77/141 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C+ + G C C GY+G A+ C+ C+C+ G+ ++ C +TG
Sbjct: 888 TGQCL-CLPHVLGRTCGLCQHGYYGLQAAV---GCKSCECHPVGSQDSG-----CHAVTG 938
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QCSC+P V G CD+CE G + S GC++C+C P+GS + C CLCRPG G
Sbjct: 939 QCSCQPGVTGLRCDRCEHGFFGF-SARGCRACNCSPLGSASAQCHE-NSTCLCRPGFVGY 996
Query: 151 RCELCQPNHYGFS-LDGCKPC 170
+C+ CQ N + C+PC
Sbjct: 997 KCDRCQANFFPDPPSSSCQPC 1017
Score = 276 (102.2 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 63/183 (34%), Positives = 84/183 (45%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCY 71
C G S+ AG C+ C +NT G C C P Y + A +C PC C
Sbjct: 273 CNGHASECAPDEAGRLV-CV-CEHNTAGTDCQHCQPFYQDRPWARGTAEAANECLPCDC- 329
Query: 72 IPGTLETETFTPVCDQLTGQ---C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
G E + + TG+ C +C+ + G C+QC HY C+ C C P
Sbjct: 330 -SGRSEECFYDAELFRRTGRGGHCRNCRDNTAGPRCEQCRQNHYRWEQQAACQPCHCHPA 388
Query: 128 G-SLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS- 185
G L CD +G C C+ VTG +CE C+ ++ S GC+PC CDP GS CDP+
Sbjct: 389 GVPLRPQCDS-SGTCTCKANVTGWKCERCKDGYHSLSEGGCRPCTCDPAGSVGT-CDPNT 446
Query: 186 GQC 188
G C
Sbjct: 447 GHC 449
Score = 259 (96.2 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 66/179 (36%), Positives = 93/179 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL-- 88
+G C +C++NT GP C+ C PG++G+ DC+PC C PG +P C QL
Sbjct: 723 SGHC-RCLHNTEGPSCERCSPGFYGNPFTGHPDDCKPCPC--PGR------SP-CTQLPS 772
Query: 89 TGQ--CS-CKPHVVGTNCDQCEVGHYNIISGE-G----CKSCDCDPVGSLNRT--CDPIT 138
+G+ C+ C P G C+ C+ G + G+ G C C C LN CD ++
Sbjct: 773 SGEVVCTHCPPGQRGKRCELCDDGFFGDPLGQRGPVRPCVPCQCHGNVDLNAVGNCDSVS 832
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSLD----G-CKPCMCDPIGSN-SLQ-CDP-SGQC 188
G+CL C TG +C+ C+P YG +L G C C C+P GS L+ CDP +GQC
Sbjct: 833 GRCLRCLHNTTGEQCQQCRPGFYGDALAPSPAGKCASCNCNPDGSALGLEGCDPGTGQC 891
Score = 223 (83.6 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 63/182 (34%), Positives = 83/182 (45%)
Query: 32 GDCLKCIYNTGGPQC--DTCLPGYFGDALALPK--G-DCEPCQ--CY-IPGTLETETFT- 82
G C C N G + C PG G L LP G C CQ Y + + ++
Sbjct: 865 GKCASCNCNPDGSALGLEGCDPGT-GQCLCLPHVLGRTCGLCQHGYYGLQAAVGCKSCEC 923
Query: 83 -PV------CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
PV C +TGQCSC+P V G CD+CE G + S GC++C+C P+GS + C
Sbjct: 924 HPVGSQDSGCHAVTGQCSCQPGVTGLRCDRCEHGFFGF-SARGCRACNCSPLGSASAQCH 982
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNR 195
CLCRPG G +C+ CQ N + P DP S+ C P C G+ +
Sbjct: 983 E-NSTCLCRPGFVGYKCDRCQANFF--------P---DPPSSS---CQPCPTCYGLVKDG 1027
Query: 196 AE 197
E
Sbjct: 1028 VE 1029
Score = 198 (74.8 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 59/177 (33%), Positives = 80/177 (45%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDA-LALPKGDCEPCQCYIPGTLETETFTPVCD 86
AG +C C + G C++C PG+ D P C PC C G C+
Sbjct: 671 AGWVEECT-CPPSYTGSFCESCAPGFKRDIPFGGPFVTCVPCTCNQHGD---------CE 720
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHY-NIISG--EGCKSCDCDPVGSLNRTCDPITGQCLC 143
L+G C C + G +C++C G Y N +G + CK C C P G T P +G+ +C
Sbjct: 721 PLSGHCRCLHNTEGPSCERCSPGFYGNPFTGHPDDCKPCPC-P-GRSPCTQLPSSGEVVC 778
Query: 144 R---PGVTGTRCELCQPNHYGFSLD--G----CKPCMCDP-IGSNSL-QCDP-SGQC 188
PG G RCELC +G L G C PC C + N++ CD SG+C
Sbjct: 779 THCPPGQRGKRCELCDDGFFGDPLGQRGPVRPCVPCQCHGNVDLNAVGNCDSVSGRC 835
Score = 163 (62.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/125 (34%), Positives = 54/125 (43%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+C+C P G+ C+ C G I G C C C+ G C+P++G C C
Sbjct: 676 ECTCPPSYTGSFCESCAPGFKRDIPFGGPFVTCVPCTCNQHGD----CEPLSGHCRCLHN 731
Query: 147 VTGTRCELCQPNHYG--FS--LDGCKPCMCDPIGSNSLQCDPSGQ--C----PGVFMNRA 196
G CE C P YG F+ D CKPC C P S Q SG+ C PG R
Sbjct: 732 TEGPSCERCSPGFYGNPFTGHPDDCKPCPC-PGRSPCTQLPSSGEVVCTHCPPGQRGKRC 790
Query: 197 EMSSD 201
E+ D
Sbjct: 791 ELCDD 795
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 443 (161.0 bits), Expect = 3.0e-40, P = 3.0e-40
Identities = 75/159 (47%), Positives = 99/159 (62%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CLKC+Y T G C+ C G+FGDAL + +C+ C+C GT T CD+ TG
Sbjct: 1009 TGACLKCLYQTTGDHCELCKDGFFGDAL---QQNCQQCECDFLGTNNTIAH---CDRFTG 1062
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P+V G CDQC H+ I SGEGC+SC+CDP+G+L+ C+ TGQC C+PG G
Sbjct: 1063 QCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGFGGR 1122
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C CQ +++G + C+PC CD G+ QCD +G C
Sbjct: 1123 ACNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNC 1161
Score = 310 (114.2 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 66/173 (38%), Positives = 90/173 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQLT 89
G C C++NT G C+ C+P ++ D + C+PC C G+ + +CD L
Sbjct: 380 GVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSSDDG----ICDSLN 435
Query: 90 --------GQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT-CDPIT 138
G C CK V G C+QC+ G++N+ S EGC+ C C+P+G+LN + C T
Sbjct: 436 ELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGTLNNSGCVMRT 495
Query: 139 GQCLCRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C+ VTG C C P YG S +GC C CD GS CD SGQC
Sbjct: 496 GECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQC 548
Score = 277 (102.6 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 60/175 (34%), Positives = 86/175 (49%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
+C P+ L V + G +C N G QCD C PG +G P+G C+ C C G
Sbjct: 788 MCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFG---PEG-CKACDCNSIG 843
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
+ + CD +TGQC C P+ G C+QC+ G++N C+ C C+ + TC
Sbjct: 844 SKDK-----YCDLITGQCQCVPNTYGRECNQCQPGYWNFPE---CRVCQCNGHAA---TC 892
Query: 135 DPITGQCL-CRPGVTGTRCELCQPNHYG---FSLD-GCKPCMC-DPIGSNSLQCD 183
DPI G C+ C+ TG C+ C +YG F + GC+PC C + + S D
Sbjct: 893 DPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVASGLAHAD 947
Score = 274 (101.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 52/122 (42%), Positives = 67/122 (54%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
C C G+L + VC+ G C CKP+VVG CDQC G Y EGCK+CDC+ +
Sbjct: 789 CNCNPTGSL-----SKVCESNGGYCQCKPNVVGRQCDQCAPGTYGF-GPEGCKACDCNSI 842
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SG 186
GS ++ CD ITGQC C P G C CQP ++ F C+ C C+ ++ CDP G
Sbjct: 843 GSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFP--ECRVCQCN---GHAATCDPIQG 897
Query: 187 QC 188
C
Sbjct: 898 TC 899
Score = 251 (93.4 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 52/130 (40%), Positives = 68/130 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C G +C+ C GY+ P+G CEPC C GTL C TG+
Sbjct: 444 GAC-HCKAFVTGRRCNQCKDGYWNLQSDNPEG-CEPCTCNPLGTLNNSG----CVMRTGE 497
Query: 92 CSCKPHVVGTNCDQCEVGHYNII-SGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK +V G +C+QC Y + S EGC C+CD GS + CD I+GQC CRP +TG
Sbjct: 498 CKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGR 557
Query: 151 RCELCQPNHY 160
C + N++
Sbjct: 558 SCSQPKQNYF 567
Score = 250 (93.1 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 51/140 (36%), Positives = 69/140 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ N G +CD C ++ +A +G CE C C G L + C+ TG
Sbjct: 1061 TGQC-PCLPNVQGVRCDQCAENHW--KIASGEG-CESCNCDPIGALHEQ-----CNSYTG 1111
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP G C+QC+ HY E C+ C+CD G+ + CD TG C+C G+ G
Sbjct: 1112 QCQCKPGFGGRACNQCQA-HYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGY 1170
Query: 151 RCELCQPNHYGFSLDGCKPC 170
+C C + G C PC
Sbjct: 1171 KCNECARGYIG-QFPHCSPC 1189
Score = 248 (92.4 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 60/171 (35%), Positives = 83/171 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE-TFTPVCDQLTG 90
G C+ C +T G CD+CL GY+G+ L + C PC+C P T+ + C T
Sbjct: 897 GTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRC--PETVASGLAHADGCSLDTR 954
Query: 91 Q----CSCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRT--CDPITGQCL- 142
C C+ G+ C+ C + N +G C C+C L T CD TG CL
Sbjct: 955 NNNMLCHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLK 1014
Query: 143 CRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSL--QCDP-SGQCP 189
C TG CELC+ +G +L C+ C CD +G+N+ CD +GQCP
Sbjct: 1015 CLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNNTIAHCDRFTGQCP 1065
Score = 206 (77.6 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 36/81 (44%), Positives = 49/81 (60%)
Query: 112 NIIS---GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
NI+S +G C+C+P GSL++ C+ G C C+P V G +C+ C P YGF +GCK
Sbjct: 776 NILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFGPEGCK 835
Query: 169 PCMCDPIGSNSLQCDP-SGQC 188
C C+ IGS CD +GQC
Sbjct: 836 ACDCNSIGSKDKYCDLITGQC 856
Score = 124 (48.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 44/168 (26%), Positives = 65/168 (38%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQCY---IPGTLETETFTP 83
G C +C +NT G C+ C +F D A C+ C+C + + FT
Sbjct: 316 GRC-ECTHNTKGMNCEEC-EDFFNDLPWKPAFGKKTNACKKCECNDHAVSCHFDEAVFTA 373
Query: 84 VCDQLTGQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNR-TCDP 136
G C +C + G +C++C Y +I S C+ CDCDP GS + CD
Sbjct: 374 SGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSSDDGICDS 433
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
+ G C C+ G + CK + N C+P
Sbjct: 434 LNE---LEEGAVAGACH-CKAFVTGRRCNQCKDGYWNLQSDNPEGCEP 477
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 418 (152.2 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 78/168 (46%), Positives = 96/168 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV---CDQ 87
TG CL+C+YNT GP C C PGY+GDA+ + C C C GT + T P CDQ
Sbjct: 981 TGQCLRCLYNTAGPHCAECQPGYYGDAM---RHSCRRCSCNTLGT-DPNTCGPQQCQCDQ 1036
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+GQC C PHV G +CD+C +N+ SG+GC+ C C P SL+ C+ TGQC CRPG
Sbjct: 1037 RSGQCHCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQHSLSPACNQFTGQCSCRPGF 1096
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
G C CQ H+G C+ C CDP G S QC SG C PG+
Sbjct: 1097 GGRTCANCQEQHWGDPRLQCRACDCDPRGIASTQCHHGSGHCDCRPGI 1144
Score = 328 (120.5 bits), Expect = 5.1e-28, P = 5.1e-28
Identities = 69/181 (38%), Positives = 96/181 (53%)
Query: 23 ILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLE- 77
+ + T+G C C +NT G +C C P Y+ + P C PC C G+L+
Sbjct: 344 VFLATGNTSGAVCDGCQHNTMGRRCHLCKPFYYRHPRSDIRAPTA-CVPCDCDPAGSLDG 402
Query: 78 --TETFTPVC-DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL-- 130
+ T V + GQC CK +V G CD+C+ G Y + G+ GC+ C CDP G++
Sbjct: 403 GACDAHTDVALGMIAGQCRCKENVAGPRCDRCQHGAYGLSQGDPQGCQRCLCDPRGTVAD 462
Query: 131 NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCD-PSGQ 187
CDPI+G CLC+ VTG C+ C P H+ S D GC+PC CD G++ QC +GQ
Sbjct: 463 GSQCDPISGDCLCKRLVTGRSCDQCLPEHWALSHDLPGCQPCECDVGGAHDNQCAMETGQ 522
Query: 188 C 188
C
Sbjct: 523 C 523
Score = 292 (107.8 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 55/123 (44%), Positives = 69/123 (56%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC C G L E C GQC CKP+VVG C +C G + G GC+ C C
Sbjct: 759 PCLCDPQGLLSAE-----CQPQGGQCRCKPNVVGRRCHRCSPGTFGFGPG-GCRPCQCSG 812
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GSL+ CD ITGQC CR G G+RC+ CQP H+GF C+PC C+ ++ +CDP +
Sbjct: 813 EGSLSAVCDTITGQCPCRQGAHGSRCDRCQPGHWGFPT--CRPCQCN---GHAEECDPQT 867
Query: 186 GQC 188
G C
Sbjct: 868 GSC 870
Score = 277 (102.6 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 63/168 (37%), Positives = 81/168 (48%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C+ P +L + G +C N G +C C PG FG P G C PCQC
Sbjct: 758 LPCLCDPQGLLSAECQPQGGQCRCKPNVVGRRCHRCSPGTFGFG---P-GGCRPCQCSGE 813
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G+L VCD +TGQC C+ G+ CD+C+ GH+ + C+ C C+ G
Sbjct: 814 GSLSA-----VCDTITGQCPCRQGAHGSRCDRCQPGHWGFPT---CRPCQCN--GHAEE- 862
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSLDG----CKPCMCDPIG 176
CDP TG CL CR G RC+ C H+G G C+PC C P G
Sbjct: 863 CDPQTGSCLRCRDHTDGERCQRCAAGHFGNPALGSGQHCRPCPC-PDG 909
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 60/170 (35%), Positives = 88/170 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C+ + G CD C P ++ L +G CEPC C+ P + +P C+Q TG
Sbjct: 1038 SGQC-HCLPHVEGQSCDRCSPNFWN--LGSGQG-CEPCACH-P----QHSLSPACNQFTG 1088
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QCSC+P G C C+ H+ + C++CDCDP G + C +G C CRPG++G
Sbjct: 1089 QCSCRPGFGGRTCANCQEQHWGDPRLQ-CRACDCDPRGIASTQCHHGSGHCDCRPGISGV 1147
Query: 151 RCELCQPNHYGFSLDGCKPCM-CDPIGSNSLQCDPSGQCPGVFMNRAEMS 199
RC+ C G + C+PC C +Q D + PG++ RA+ S
Sbjct: 1148 RCDQCARGFSG-TFPACQPCHPCFGDWDRVVQ-DLAS--PGLWEQRAQPS 1193
Score = 267 (99.0 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 60/169 (35%), Positives = 82/169 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVC--DQ 87
TG CL+C +T G +C C G+FG+ AL G C PC C G F C D
Sbjct: 867 TGSCLRCRDHTDGERCQRCAAGHFGNP-ALGSGQHCRPCPCP-DGPGGPRHFAASCYQDG 924
Query: 88 LTGQ--CSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC-DPVGSLN-RTCDPITGQC 141
+ Q C C P G CD+C G+Y + G C+ C C + + + + CD TGQC
Sbjct: 925 RSRQVVCHCSPGYTGPRCDECAPGYYGDPLQPGGHCRPCQCHNNIDTTDPEACDRRTGQC 984
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
L C G C CQP +YG ++ C+ C C+ +G++ C P QC
Sbjct: 985 LRCLYNTAGPHCAECQPGYYGDAMRHSCRRCSCNTLGTDPNTCGPQ-QC 1032
Score = 258 (95.9 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 51/135 (37%), Positives = 72/135 (53%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C N GP+CD C G +G + P+G C+ C C GT+ + CD ++G
Sbjct: 418 GQC-RCKENVAGPRCDRCQHGAYGLSQGDPQG-CQRCLCDPRGTVADGS---QCDPISGD 472
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK V G +CDQC H+ + GC+ C+CD G+ + C TGQC CR + G
Sbjct: 473 CLCKRLVTGRSCDQCLPEHWALSHDLPGCQPCECDVGGAHDNQCAMETGQCRCRSHIVGR 532
Query: 151 RCELCQPNHYGFSLD 165
+CE +P Y +LD
Sbjct: 533 QCEQVEPGFYRINLD 547
Score = 206 (77.6 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 36/73 (49%), Positives = 41/73 (56%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C CDP G L+ C P GQC C+P V G RC C P +GF GC+PC C GS
Sbjct: 756 GALPCLCDPQGLLSAECQPQGGQCRCKPNVVGRRCHRCSPGTFGFGPGGCRPCQCSGEGS 815
Query: 178 NSLQCDP-SGQCP 189
S CD +GQCP
Sbjct: 816 LSAVCDTITGQCP 828
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 35/116 (30%), Positives = 43/116 (37%)
Query: 16 CVGPPSDILKSVAGT-TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
C P L TG C C GG C C ++GD P+ C C C G
Sbjct: 1071 CACHPQHSLSPACNQFTGQC-SCRPGFGGRTCANCQEQHWGD----PRLQCRACDCDPRG 1125
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSC--DCDPV 127
T+ C +G C C+P + G CDQC G + C C D D V
Sbjct: 1126 IASTQ-----CHHGSGHCDCRPGISGVRCDQCARGFSGTFPACQPCHPCFGDWDRV 1176
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 43/154 (27%), Positives = 59/154 (38%)
Query: 53 YFGDALALPKGDCEPCQCYIPGTLETETFTP-VCDQLTGQCSCKPHVVGTNCDQCEVGHY 111
Y D L + +G C C + P V + G+C CK H G NC++CE ++
Sbjct: 254 YAVDELVM-RGSCF-CHGHAAECAPAPGAPPSVPGMIHGRCVCKHHTQGLNCERCEDFYH 311
Query: 112 NII--SGEG-----CKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL 164
+ EG C+ CDC+ +R C L +G C+ CQ N G
Sbjct: 312 ELPWRPAEGSSTNACRRCDCN---EHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRRC 368
Query: 165 DGCKPCM-----CD---PIGSNSLQCDPSGQCPG 190
CKP D P CDP+G G
Sbjct: 369 HLCKPFYYRHPRSDIRAPTACVPCDCDPAGSLDG 402
Score = 76 (31.8 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 165 DGCKPCMCDPIGSNSLQCDPSG-QC---PGVFMNRAEMSS 200
+G PC+CDP G S +C P G QC P V R S
Sbjct: 755 NGALPCLCDPQGLLSAECQPQGGQCRCKPNVVGRRCHRCS 794
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 403 (146.9 bits), Expect = 5.4e-36, P = 5.4e-36
Identities = 71/162 (43%), Positives = 91/162 (56%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP---VCDQ 87
TG CLKC+YNT GP C C GY+GDA + +C C C GT ++ + VC +
Sbjct: 988 TGQCLKCLYNTEGPDCSVCRSGYYGDA---SRRNCRKCTCNFLGTERSQCLSRDDCVCQR 1044
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC C P+V+G CD C +N+ SG+GC+ C CDP + C+ TGQC CR G
Sbjct: 1045 ATGQCQCLPNVIGQTCDHCAPNSWNLASGQGCEPCACDPNNAYTSACNEFTGQCQCRVGF 1104
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G C CQ NH+G C+ C CDP G S QC+ +G C
Sbjct: 1105 GGKTCTDCQENHWGDPRVLCRACDCDPRGIESSQCNRMTGHC 1146
Score = 310 (114.2 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 61/170 (35%), Positives = 88/170 (51%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALA--LPKGDCEPCQCYIPGTLETETFT----PVC 85
G C C++NT G C++C P Y+ D G C C C G+ P
Sbjct: 356 GVCDNCLHNTMGSNCESCKPFYYQDPTRDIRDPGVCVACDCDPDGSKNGGVCDGHDDPSL 415
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRT--CDPITGQC 141
+ GQC CK +V G+ CD+C+ G + + + + GC+ C CDP G+++ + CDP++G C
Sbjct: 416 GMIAGQCRCKDNVEGSRCDKCKPGFFGLSASDPRGCQPCKCDPRGTVSGSSQCDPVSGDC 475
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCD-PSGQC 188
C+ VTG C C P H+ S D GC+ C CD G+ QC +GQC
Sbjct: 476 FCKRLVTGHSCNQCLPEHWALSHDTSGCRGCDCDVGGATENQCSMETGQC 525
Score = 268 (99.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 54/152 (35%), Positives = 80/152 (52%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
+C G L +AG C +C N G +CD C PG+FG + + P+G C+PC+C G
Sbjct: 406 VCDGHDDPSLGMIAG---QC-RCKDNVEGSRCDKCKPGFFGLSASDPRG-CQPCKCDPRG 460
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRT 133
T+ + CD ++G C CK V G +C+QC H+ + GC+ CDCD G+
Sbjct: 461 TVSGSS---QCDPVSGDCFCKRLVTGHSCNQCLPEHWALSHDTSGCRGCDCDVGGATENQ 517
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLD 165
C TGQC CR + G +C + ++ +LD
Sbjct: 518 CSMETGQCQCRSHMIGRQCNQVESGYFFMALD 549
Score = 268 (99.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 58/184 (31%), Positives = 84/184 (45%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
+ G P+ + + + C + + PQ AL C+C
Sbjct: 713 MFTAGDPASVARKQSFERYRCHETAKSVSRPQMSEVCAKLITSMSALINDGALACECDPQ 772
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G+L +E CD GQC C+P++ G C++C G Y GCK C+C GS +R
Sbjct: 773 GSLSSE-----CDVRGGQCRCRPNISGRRCEKCAPGAYGF-GPSGCKLCECSLEGSQSRF 826
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQCPGVF 192
CD +GQC CRPG G RC+ CQ H+GF C+PC C+ ++ +C +G C
Sbjct: 827 CDLYSGQCPCRPGAYGQRCDGCQAGHWGFP--NCRPCQCN---GHADECHQRTGACLNCR 881
Query: 193 MNRA 196
N A
Sbjct: 882 SNTA 885
Score = 265 (98.3 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 54/140 (38%), Positives = 73/140 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ N G CD C P + LA +G CEPC C P +T C++ TG
Sbjct: 1046 TGQC-QCLPNVIGQTCDHCAPNSWN--LASGQG-CEPCACD-PNN----AYTSACNEFTG 1096
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+ G C C+ H+ C++CDCDP G + C+ +TG C+C+ GV+G
Sbjct: 1097 QCQCRVGFGGKTCTDCQENHWGD-PRVLCRACDCDPRGIESSQCNRMTGHCVCQQGVSGV 1155
Query: 151 RCELCQPNHYGFSLDGCKPC 170
RC+ C G D CKPC
Sbjct: 1156 RCDQCARGFSGTFPD-CKPC 1174
Score = 249 (92.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 56/168 (33%), Positives = 76/168 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
TG CL C NT G +C+ C GY+G+ + C PC C G F C D
Sbjct: 874 TGACLNCRSNTAGDKCERCANGYYGNPVLGLGSQCRPCPCP-EGPNSGRHFAASCYQDNR 932
Query: 89 TGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLN--RTCDPITGQCL 142
+ Q C+C G CD+C G++ S G C+ C C L+ +CD TGQCL
Sbjct: 933 SQQVVCNCNQGYTGPRCDECAPGYFGDPSKPGGQCQPCRCSNNIDLSDPESCDKRTGQCL 992
Query: 143 -CRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C G C +C+ +YG S C+ C C+ +G+ QC C
Sbjct: 993 KCLYNTEGPDCSVCRSGYYGDASRRNCRKCTCNFLGTERSQCLSRDDC 1040
Score = 199 (75.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 62/199 (31%), Positives = 88/199 (44%)
Query: 19 PPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGYFGDALALP-KGD----CEPCQCYI 72
P I + G G C+ C +NT G C+ C ++ D P +G C+ C C
Sbjct: 278 PIEGIRDDIEGMVHGRCV-CKHNTKGLNCEQC-DDFYNDLPWRPAEGRNTNACKKCNCNG 335
Query: 73 PGT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNI----ISGEG-CKSCD 123
+ + + G C +C + +G+NC+ C+ +Y I G C +CD
Sbjct: 336 HSNQCHFDMAVYLATGNISGGVCDNCLHNTMGSNCESCKPFYYQDPTRDIRDPGVCVACD 395
Query: 124 CDPVGSLNR-TCD----P----ITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCM 171
CDP GS N CD P I GQC C+ V G+RC+ C+P +G S GC+PC
Sbjct: 396 CDPDGSKNGGVCDGHDDPSLGMIAGQCRCKDNVEGSRCDKCKPGFFGLSASDPRGCQPCK 455
Query: 172 CDPIGSNSLQCDPSGQCPG 190
CDP G+ S G
Sbjct: 456 CDPRGTVS----------G 464
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/108 (31%), Positives = 46/108 (42%)
Query: 16 CVGPPSDILKSVAGT-TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
C P++ S TG C +C GG C C ++GD P+ C C C P
Sbjct: 1079 CACDPNNAYTSACNEFTGQC-QCRVGFGGKTCTDCQENHWGD----PRVLCRACDCD-PR 1132
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
+E+ C+++TG C C+ V G CDQC G CK C
Sbjct: 1133 GIESSQ----CNRMTGHCVCQQGVSGVRCDQCARGFSGTFPD--CKPC 1174
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 405 (147.6 bits), Expect = 8.3e-36, P = 8.3e-36
Identities = 71/170 (41%), Positives = 95/170 (55%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P+ + TG+C C++NT GP C+ C PG++GDA+ +C C C GT
Sbjct: 1958 PNMLFSDCHPLTGECQSCMHNTAGPHCEICAPGFYGDAITAK--NCTRCNCSPCGTAH-- 2013
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
CD TGQC CKP VVG CD+CE G + S GC+ CDCD +L + CDP+ G
Sbjct: 2014 -----CDSHTGQCHCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCDASAALVQACDPVNG 2068
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C C+PGV G C C P H+ +S +GC+ C C G +CDP +G+C
Sbjct: 2069 ACACQPGVNGPNCHQCAPGHWNYSSNGCRKCECK--GG---RCDPRTGEC 2113
Score = 294 (108.6 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 63/168 (37%), Positives = 83/168 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDAL-ALPKGDCEP-------CQCYIPGTLETET 80
TG C C N G CD C GY F + L G+ P C+C GT E +
Sbjct: 436 TGRCY-CKPNYTGENCDQCAEGYEHFPECYQVLINGEVRPAGENIIDCECNAAGT-EGNS 493
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
P D T C CKP G +CD C G+++I C+ C C G L+ +CD +TGQ
Sbjct: 494 CRP--DPRTNTCVCKPEFTGEHCDTCSHGYFSI----NCQRCQCSGQGCLDGSCDAVTGQ 547
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C+CR G G CE C P ++ + L C+ C C +GS CDP+G+C
Sbjct: 548 CVCRSGFQGYSCEQCAPGYFNYPL--CQYCGCSVVGSIPEMCDPAGRC 593
Score = 289 (106.8 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 62/180 (34%), Positives = 85/180 (47%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
+C P L S C C N GP+C C PGY+ + P C PC C + G
Sbjct: 619 VCTCDPRTSLDSSCSELDQC-NCRPNYSGPRCQQCAPGYY----SYPS--CTPCDCSVEG 671
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
+ + CD ++GQC C P++ G CD C G Y C+ C+P GS++
Sbjct: 672 SRSSS-----CDPVSGQCVCLPNIEGQRCDSCSPGSYGFPL---CQLGTCNPAGSVHNDI 723
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNS--LQCDP-SGQC 188
P G C+CRP V G CE C+P ++ S D GC C C+ G+ S +C +GQC
Sbjct: 724 LPTVGSCVCRPYVEGVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQC 783
Score = 277 (102.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 59/158 (37%), Positives = 83/158 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G CL C GP+CD C G+ + P +C+ C C +L++ C +L Q
Sbjct: 591 GRCL-CRPEFTGPRCDQCQSGFH----SYP--NCQVCTCDPRTSLDSS-----CSELD-Q 637
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+C+P+ G C QC G+Y+ S C CDC GS + +CDP++GQC+C P + G R
Sbjct: 638 CNCRPNYSGPRCQQCAPGYYSYPS---CTPCDCSVEGSRSSSCDPVSGQCVCLPNIEGQR 694
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C+ C P YGF L C+ C+P GS P+ G C
Sbjct: 695 CDSCSPGSYGFPL--CQLGTCNPAGSVHNDILPTVGSC 730
Score = 276 (102.2 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 61/176 (34%), Positives = 88/176 (50%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C++C ++T G C+ C+PGY+ L P C CQC E+E C+
Sbjct: 383 GVCVECQHHTTGVNCERCIPGYYRSPDHPLESPFA-CSKCQC------ESEFTEGTCEDR 435
Query: 89 TGQCSCKPHVVGTNCDQCEVGH------YNII-------SGEGCKSCDCDPVGSLNRTC- 134
TG+C CKP+ G NCDQC G+ Y ++ +GE C+C+ G+ +C
Sbjct: 436 TGRCYCKPNYTGENCDQCAEGYEHFPECYQVLINGEVRPAGENIIDCECNAAGTEGNSCR 495
Query: 135 -DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
DP T C+C+P TG C+ C +H FS++ C+ C C G CD +GQC
Sbjct: 496 PDPRTNTCVCKPEFTGEHCDTC--SHGYFSIN-CQRCQCSGQGCLDGSCDAVTGQC 548
Score = 260 (96.6 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 55/166 (33%), Positives = 82/166 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C+ N G +CD+C PG +G L G C P G++ + V G
Sbjct: 681 SGQCV-CLPNIEGQRCDSCSPGSYGFPLC-QLGTCNPA-----GSVHNDILPTV-----G 728
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
C C+P+V G C++C+ ++N+ GC +CDC+ G+L+ C TGQC C+P
Sbjct: 729 SCVCRPYVEGVACERCKPLYWNLSPDTIYGCSTCDCNTAGTLSEVAECTQRTGQCFCKPN 788
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPS-GQC 188
V C +C+ + D GC+ C CD GS CD G+C
Sbjct: 789 VCSGTCNVCKDGFFNLQKDSYFGCQGCQCDIGGSVGQACDERYGRC 834
Score = 258 (95.9 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 57/169 (33%), Positives = 78/169 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+C+ C T P C TC P FG P CE C C PG + CD G
Sbjct: 1478 TGECI-CPPRTLQPDCVTCEPQTFG---CHPLVGCEMCNCSRPGVTSMDIS---CDTNNG 1530
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+ ++VG CD+C G Y C+ C+C+ G+ CD TG+CLC+ V G
Sbjct: 1531 QCRCRNNIVGRQCDRCFPGFYGY---PNCRPCNCNEAGTEMNVCDSFTGRCLCKENVEGP 1587
Query: 151 RCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRA 196
RC+ C+ + + GC C C G+ +C S + M+ A
Sbjct: 1588 RCDQCKLGTFHLDPTNAKGCTKCFC--FGATD-RCHSSDKRRSEIMDMA 1633
Score = 254 (94.5 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 57/177 (32%), Positives = 83/177 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYF-GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G C+ C +NT G C+ CL G+ + + C C C P + + F C +
Sbjct: 1856 SGICVNCRHNTAGNHCEKCLGGFHHNNTVDGHSVSCSSCPC--PLQVASNNFAIRCVEKP 1913
Query: 90 G--QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQC 141
+C C P G+ C++C G+Y ++ G C+ C+C DP L C P+TG+C
Sbjct: 1914 NNMRCLCMPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCNGNSDP-NMLFSDCHPLTGEC 1972
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCDP-SGQC---PGV 191
C G CE+C P YG ++ C C C P G+ CD +GQC PGV
Sbjct: 1973 QSCMHNTAGPHCEICAPGFYGDAITAKNCTRCNCSPCGT--AHCDSHTGQCHCKPGV 2027
Score = 253 (94.1 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 51/144 (35%), Positives = 70/144 (48%)
Query: 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET 78
P + + T G C+ C G C+ C P Y+ + G C C C GTL
Sbjct: 715 PAGSVHNDILPTVGSCV-CRPYVEGVACERCKPLYWNLSPDTIYG-CSTCDCNTAGTLSE 772
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDP 136
C Q TGQC CKP+V C+ C+ G +N+ GC+ C CD GS+ + CD
Sbjct: 773 ---VAECTQRTGQCFCKPNVCSGTCNVCKDGFFNLQKDSYFGCQGCQCDIGGSVGQACDE 829
Query: 137 ITGQCLCRPGVTGTRCELCQPNHY 160
G+C CRP V G +C+ +P+HY
Sbjct: 830 RYGRCRCRPNVEGPKCKQPRPDHY 853
Score = 248 (92.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 52/160 (32%), Positives = 77/160 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G +C N G C C GY+G P +C PC C G+ +C+ +TG+
Sbjct: 1437 GGQCRCRPNVIGRDCSQCATGYYG----FP--NCRPCNC---GSR-------LCEPVTGE 1480
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVG--SLNRTCDPITGQCLCRPGVTG 149
C C P + +C CE + GC+ C+C G S++ +CD GQC CR + G
Sbjct: 1481 CICPPRTLQPDCVTCEPQTFGCHPLVGCEMCNCSRPGVTSMDISCDTNNGQCRCRNNIVG 1540
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C P YG+ C+PC C+ G+ CD +G+C
Sbjct: 1541 RQCDRCFPGFYGYP--NCRPCNCNEAGTEMNVCDSFTGRC 1578
Score = 244 (91.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 55/145 (37%), Positives = 68/145 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C C G QCD C G FG D+ C C C L CD +
Sbjct: 2018 TGQC-HCKPGVVGAQCDRCEHGTFGFDSCT----GCRKCDCDASAAL-----VQACDPVN 2067
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G C+C+P V G NC QC GH+N S GC+ C+C G CDP TG+C C G+TG
Sbjct: 2068 GACACQPGVNGPNCHQCAPGHWNY-SSNGCRKCECK--GG---RCDPRTGECRCTTGLTG 2121
Query: 150 TRCELCQPNHYGFSLDG----CKPC 170
+C+ C H +G C+PC
Sbjct: 2122 KQCDTCLSQHSVPVQNGADMHCQPC 2146
Score = 239 (89.2 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 48/126 (38%), Positives = 68/126 (53%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC C+ G E++T C+ GQC C+P+V+G +C QC G+Y C+ C+C
Sbjct: 1420 PCGCHEVGA-ESDT----CESFGGQCRCRPNVIGRDCSQCATGYYGF---PNCRPCNC-- 1469
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ--CD 183
GS R C+P+TG+C+C P C C+P +G L GC+ C C G S+ CD
Sbjct: 1470 -GS--RLCEPVTGECICPPRTLQPDCVTCEPQTFGCHPLVGCEMCNCSRPGVTSMDISCD 1526
Query: 184 PS-GQC 188
+ GQC
Sbjct: 1527 TNNGQC 1532
Score = 228 (85.3 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 61/180 (33%), Positives = 80/180 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
CL C N G C C PGY+ D L G C PC C + C +G C
Sbjct: 1810 CL-CPGNYLGDSCQQCAPGYYRDNKGLFLGKCVPCNC--------NGHSDQCLDGSGICV 1860
Query: 93 SCKPHVVGTNCDQCEVG--HYNIISGEG--CKSCDCD-PVGSLNRT--C--DPITGQCLC 143
+C+ + G +C++C G H N + G C SC C V S N C P +CLC
Sbjct: 1861 NCRHNTAGNHCEKCLGGFHHNNTVDGHSVSCSSCPCPLQVASNNFAIRCVEKPNNMRCLC 1920
Query: 144 RPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGS-NSL--QCDP-SGQCPGVFMNRA 196
PG G++CE C P +YG + C+PC C+ N L C P +G+C N A
Sbjct: 1921 MPGYAGSKCERCAPGYYGNPVVIGSTCQPCNCNGNSDPNMLFSDCHPLTGECQSCMHNTA 1980
Score = 151 (58.2 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 30/72 (41%), Positives = 38/72 (52%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C C VG+ + TC+ GQC CRP V G C C +YGF C+PC C GS
Sbjct: 1417 GAVPCGCHEVGAESDTCESFGGQCRCRPNVIGRDCSQCATGYYGFP--NCRPCNC---GS 1471
Query: 178 NSLQCDP-SGQC 188
C+P +G+C
Sbjct: 1472 RL--CEPVTGEC 1481
Score = 127 (49.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 43/148 (29%), Positives = 62/148 (41%)
Query: 37 CIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ----- 87
C +NT G CD C PG+ + A +CEPC C+ + E + P DQ
Sbjct: 316 CQHNTCGTSCDGCCPGFNQFPWKPATTYSANECEPCNCHRHSS-ECY-YDPEIDQRRSSL 373
Query: 88 -LTGQ------C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
+ G+ C C+ H G NC++C G+Y +S P C+
Sbjct: 374 DMQGEYNGGGVCVECQHHTTGVNCERCIPGYYRS-PDHPLES----PFACSKCQCESEFT 428
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGC 167
+ C TG RC C+PN+ G + D C
Sbjct: 429 EGTCEDR-TG-RC-YCKPNYTGENCDQC 453
Score = 56 (24.8 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
F +G PC C +G+ S C+ GQC
Sbjct: 1413 FFNNGAVPCGCHEVGAESDTCESFGGQC 1440
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 400 (145.9 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 72/170 (42%), Positives = 97/170 (57%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP- 83
+S + TG+CL+C++NT G C C PG++G AL C C C+ G E P
Sbjct: 982 ESCSRVTGECLRCLHNTQGANCQLCKPGHYGSAL---NQTCRRCSCHASGVSPMEC-PPG 1037
Query: 84 ----VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
+CD +TG C C P+V G CD+C G++N++ G GC+SCDCDP S + CD +TG
Sbjct: 1038 GGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTG 1097
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
QC C+ G G RC CQ N+YG C PC C+ G+ CDP +G C
Sbjct: 1098 QCPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQKPICDPDTGMC 1147
Score = 345 (126.5 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 71/169 (42%), Positives = 89/169 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLE----TETFTPVC 85
G C C +NT G CD C P ++ D L C PC+C GT+ P
Sbjct: 357 GVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACIPCECDPDGTISGGICVSHSDPAL 416
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLN-RTCDPITGQCL 142
+ GQC CK +V G CDQC+ HY + + + GC+ CDC+P+GSL TCD TGQCL
Sbjct: 417 GSVAGQCLCKENVEGAKCDQCKPNHYGLSATDPLGCQPCDCNPLGSLPFLTCDVDTGQCL 476
Query: 143 CRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCDP-SGQC 188
C VTG CE C ++G L GC PC CD G+ S C P +GQC
Sbjct: 477 CLSYVTGAHCEECTVGYWGLGNHLHGCSPCDCDIGGAYSNVCSPKNGQC 525
Score = 286 (105.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 59/147 (40%), Positives = 78/147 (53%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
+CV L SVAG CL C N G +CD C P ++G + P G C+PC C G
Sbjct: 407 ICVSHSDPALGSVAG---QCL-CKENVEGAKCDQCKPNHYGLSATDPLG-CQPCDCNPLG 461
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRT 133
+L T CD TGQC C +V G +C++C VG++ + + GC CDCD G+ +
Sbjct: 462 SLPFLT----CDVDTGQCLCLSYVTGAHCEECTVGYWGLGNHLHGCSPCDCDIGGAYSNV 517
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHY 160
C P GQC CRP VTG C P ++
Sbjct: 518 CSPKNGQCECRPHVTGRSCSEPAPGYF 544
Score = 261 (96.9 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 49/122 (40%), Positives = 66/122 (54%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
C+C+ G++ + C +L GQC CKP VVG CD+C G Y++ GC C C P
Sbjct: 769 CKCHPQGSVGSS-----CSRLGGQCQCKPLVVGRCCDRCSTGSYDL-GHHGCHPCHCHPQ 822
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SG 186
GS + CD +TGQC C V+G RC+ C ++GF C PC C+ CDP +G
Sbjct: 823 GSKDTVCDQVTGQCPCHGEVSGRRCDRCLAGYFGFP--SCHPCPCNRFAE---LCDPETG 877
Query: 187 QC 188
C
Sbjct: 878 SC 879
Score = 261 (96.9 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 60/167 (35%), Positives = 76/167 (45%)
Query: 7 HVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCE 66
H S + + C PP TG C C+ N G CD C GY+ +P C+
Sbjct: 1025 HASGVSPMEC--PPGGGACLCDPVTGAC-PCLPNVTGLACDRCADGYWN---LVPGRGCQ 1078
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
C C P T ++ CDQLTGQC CK G C +C+ +Y G C CDC+
Sbjct: 1079 SCDCD-PRTSQSSH----CDQLTGQCPCKLGYGGKRCSECQENYYGDPPGR-CIPCDCNR 1132
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPC-MC 172
G+ CDP TG C CR GV+G RC+ C H C C +C
Sbjct: 1133 AGTQKPICDPDTGMCRCREGVSGQRCDRCARGH-SQEFPTCLQCHLC 1178
Score = 253 (94.1 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 55/166 (33%), Positives = 78/166 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ-LT 89
TG C C T G C+ C+ GY+G+ + C PC C + + F C Q L
Sbjct: 876 TGSCFNCGGFTTGRNCERCIDGYYGNPSS--GQPCRPCLCPDDPS-SNQYFAHSCYQNLW 932
Query: 90 GQ---CSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLN--RTCDPITGQCL 142
C+C GT C +C G Y ISG C+ C C+ + +C +TG+CL
Sbjct: 933 SSDVICNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECL 992
Query: 143 -CRPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
C G C+LC+P HYG +L+ C+ C C G + ++C P G
Sbjct: 993 RCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGG 1038
Score = 245 (91.3 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 60/165 (36%), Positives = 75/165 (45%)
Query: 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET 78
P + S + G C +C G CD C G + L C PC C+ G+ +T
Sbjct: 773 PQGSVGSSCSRLGGQC-QCKPLVVGRCCDRCSTGSYD----LGHHGCHPCHCHPQGSKDT 827
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
VCDQ+TGQC C V G CD+C G++ S C C C+ L CDP T
Sbjct: 828 -----VCDQVTGQCPCHGEVSGRRCDRCLAGYFGFPS---CHPCPCNRFAEL---CDPET 876
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMC--DPIGSN 178
G C C TG CE C +YG G C+PC+C DP SN
Sbjct: 877 GSCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLCPDDP-SSN 920
Score = 228 (85.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 59/191 (30%), Positives = 82/191 (42%)
Query: 22 DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGT- 75
D+ G C+ C +NT GP C+ C +F DA P D C C C +
Sbjct: 283 DVFSPPGMVHGQCV-CQHNTDGPNCERC-KDFFQDAPWRPAADLQDNACRSCSCNSHSSR 340
Query: 76 --LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPV 127
+ T+ G C C+ + G +CD+C Y I C C+CDP
Sbjct: 341 CHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACIPCECDPD 400
Query: 128 GSLNR-TC----DP----ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSN 178
G+++ C DP + GQCLC+ V G +C+ C+PNHYG S DP+G
Sbjct: 401 GTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGLSAT-------DPLGCQ 453
Query: 179 SLQCDPSGQCP 189
C+P G P
Sbjct: 454 PCDCNPLGSLP 464
Score = 210 (79.0 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 55/156 (35%), Positives = 70/156 (44%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C G +CD CL GYFG P C PC C F +CD TG
Sbjct: 833 TGQC-PCHGEVSGRRCDRCLAGYFG----FPS--CHPCPC--------NRFAELCDPETG 877
Query: 91 QC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDC--DPVGS--LNRTC-DPITGQ--- 140
C +C G NC++C G+Y N SG+ C+ C C DP + +C +
Sbjct: 878 SCFNCGGFTTGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQYFAHSCYQNLWSSDVI 937
Query: 141 CLCRPGVTGTRCELCQPNHYGFS-LDG--CKPCMCD 173
C C G TGT+C C YG + G C+PC C+
Sbjct: 938 CNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACN 973
Score = 186 (70.5 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLN--RTCDPITGQCL-CRPG 146
C+C GT C +C G Y ISG C+ C C+ + +C +TG+CL C
Sbjct: 938 CNCLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLRCLHN 997
Query: 147 VTGTRCELCQPNHYGFSLDG-CKPCMCD---------PIGSNSLQCDP-SGQCP 189
G C+LC+P HYG +L+ C+ C C P G + CDP +G CP
Sbjct: 998 TQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTGACP 1051
Score = 182 (69.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 31/74 (41%), Positives = 39/74 (52%)
Query: 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+G +C C P GS+ +C + GQC C+P V G C+ C Y GC PC C P G
Sbjct: 764 DGAVACKCHPQGSVGSSCSRLGGQCQCKPLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQG 823
Query: 177 SNSLQCDP-SGQCP 189
S CD +GQCP
Sbjct: 824 SKDTVCDQVTGQCP 837
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 46/180 (25%), Positives = 70/180 (38%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDC----EPCQCYIPGTLETETFTPVC 85
T GD L G Q D+ Y+ + +G C +C + + F+P
Sbjct: 235 TLGDAL-----LGRRQNDSLDKYYYALYEMIVRGSCFCNGHASECRPMQKMRGDVFSPP- 288
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNI-------ISGEGCKSCDCDPVGSLNRTCDPIT 138
+ GQC C+ + G NC++C+ + + C+SC C+ S + C
Sbjct: 289 GMVHGQCVCQHNTDGPNCERCKDFFQDAPWRPAADLQDNACRSCSCN---SHSSRCHFDM 345
Query: 139 GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPC--------MCDPIGSNSLQCDPSGQCPG 190
L G++G CE CQ N G D C+P + DP +CDP G G
Sbjct: 346 TTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPLKTISDPYACIPCECDPDGTISG 405
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 396 (144.5 bits), Expect = 7.6e-35, P = 7.6e-35
Identities = 71/171 (41%), Positives = 101/171 (59%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CL+C+ NT G C+ C PG++GDA+ L +C+ C C L T+T CD G
Sbjct: 1935 TGECLRCLNNTFGAACNLCAPGFYGDAIKLK--NCQSCDC---DDLGTQT----CDPFVG 1985
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C+C +V+G CD+C+ HY SG GC++CDC S + CDP TG C C+ GVTG
Sbjct: 1986 VCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCG-AASNSTQCDPHTGHCACKSGVTGR 2044
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAE 197
+C+ C +H+ + DGC PC C+ S C+P+ G+C PGV +R +
Sbjct: 2045 QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCD 2095
Score = 300 (110.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 56/158 (35%), Positives = 85/158 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C N G C C GY+G P +C+ C+C G++ + C+ TG
Sbjct: 464 SGQQCPCKINFAGAYCKQCAEGYYG----FP--ECKACECNKIGSITND-----CNVTTG 512
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C + G NC++C+ G++N + C CDCD G+ + C+ +GQC+CR G G
Sbjct: 513 ECKCLTNFGGDNCERCKHGYFNYPT---CSYCDCDNQGTESEICNKQSGQCICREGFGGP 569
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
RC+ C P Y + D CKPC C GS+++ CD +G+C
Sbjct: 570 RCDQCLPGFYNYP-D-CKPCNCSSTGSSAITCDNTGKC 605
Score = 289 (106.8 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 63/172 (36%), Positives = 84/172 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD-QLT 89
TG C KC + T G C+ C+ GY+G+A GDC C C +P ++ F C+ +
Sbjct: 1822 TGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLP--FDSNNFATSCEISES 1879
Query: 90 GQ---CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNR----TCDPITGQ 140
G C CKP G C+ C G Y G+ CK C+C G++N +CD TG+
Sbjct: 1880 GDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECS--GNINPEDQGSCDTRTGE 1937
Query: 141 CL-CRPGVTGTRCELCQPNHYG--FSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
CL C G C LC P YG L C+ C CD +G+ + CDP G C
Sbjct: 1938 CLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQT--CDPFVGVC 1987
Score = 263 (97.6 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 63/166 (37%), Positives = 84/166 (50%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G CL C N G QCD+C G++ P CE C C G ++ F G+
Sbjct: 648 GQCL-CQPNFDGRQCDSCKEGFYN----FPS--CEDCNCDPAGVIDK--FAGCGSVPVGE 698
Query: 92 -CSCKPHVVGTNCDQCEVGHYNI-ISG-EGCKSCDCDPVGSLNR--TCDPITGQCLCRPG 146
C CK V G C++C+ ++N+ IS EGC+ CDC G+++ TC +GQC C+P
Sbjct: 699 LCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPH 758
Query: 147 VTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RC+ C+ + SL GCK C CD GS CD SGQC
Sbjct: 759 TQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQC 804
Score = 260 (96.6 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 52/151 (34%), Positives = 71/151 (47%)
Query: 16 CVGPPSDILKSVAGT----TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
C P+ ++ AG G+ KC G C+ C P Y+ ++ +G CE C C+
Sbjct: 677 CNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECKPLYWNLNISNTEG-CEICDCW 735
Query: 72 IPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGS 129
GT+ C +GQC CKPH G C +C G +++ S GCK C CD GS
Sbjct: 736 TDGTISA---LDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGS 792
Query: 130 LNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
CD I+GQC C P +TG C H+
Sbjct: 793 WQSVCDKISGQCKCHPRITGLACTQPLTTHF 823
Score = 252 (93.8 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 60/169 (35%), Positives = 83/169 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ N G QC C GY+ + P DC PC C G+ C+ G
Sbjct: 602 TGKC-NCLNNFAGKQCTLCTAGYY----SYP--DCLPCHCDSHGSQGVS-----CNS-DG 648
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT--CD--PITGQCLCRPG 146
QC C+P+ G CD C+ G YN S C+ C+CDP G +++ C P+ C C+
Sbjct: 649 QCLCQPNFDGRQCDSCKEGFYNFPS---CEDCNCDPAGVIDKFAGCGSVPVGELCKCKER 705
Query: 147 VTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSL--QC-DPSGQCP 189
VTG C C+P ++ ++ +GC+ C C G+ S C SGQCP
Sbjct: 706 VTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCP 754
Score = 248 (92.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 53/140 (37%), Positives = 68/140 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C N G +CD C P ++G + C C C G T CD TG
Sbjct: 1985 GVCT-CHENVIGDRCDRCKPDHYGFESGV---GCRACDC---GAASNST---QCDPHTGH 2034
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+CK V G CD+C V H+ +GC C+C+ S C+P TG+C C PGV G R
Sbjct: 2035 CACKSGVTGRQCDRCAVDHWKY-EKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDR 2093
Query: 152 CELCQPNHYGFSLD-GCKPC 170
C+ C PN + D GC+ C
Sbjct: 2094 CDAC-PNRWVLIKDEGCQEC 2112
Score = 240 (89.5 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 53/160 (33%), Positives = 74/160 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C N C C Y+G P DC+PC+C P + +C+ TG+
Sbjct: 1392 GQC-QCKPNVIERTCGACRSRYYG----FP--DCKPCKC--PNSA-------MCEPTTGE 1435
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPGVTG 149
C C P+V+G C++C Y GC+ C C+P+G N CD G C CR + G
Sbjct: 1436 CMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEG 1495
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C++C N Y F+ C+ C C G+ CD G C
Sbjct: 1496 RACDVCS-NGY-FNFPHCEQCSCHKPGTELEVCDKIDGAC 1533
Score = 236 (88.1 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 54/166 (32%), Positives = 77/166 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-------CEPCQCYIPGTLETETFTPV 84
G C C +NT G C+ C P Y+ PKG C PCQC + T
Sbjct: 365 GVCQNCQHNTVGINCNKCKPKYYR-----PKGKHWNETDVCSPCQC------DYFFSTGH 413
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ-CLC 143
C++ TG C C+ +CD C G+Y C+ C+C+ G+ C+ +GQ C C
Sbjct: 414 CEEETGNCECRAAFQPPSCDSCAYGYYGY---PNCRECECNLNGTNGYHCEAESGQQCPC 470
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
+ G C+ C +YGF CK C C+ IGS + C+ +G+C
Sbjct: 471 KINFAGAYCKQCAEGYYGFP--ECKACECNKIGSITNDCNVTTGEC 514
Score = 235 (87.8 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 52/157 (33%), Positives = 69/157 (43%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG+C+ C N G C+ C P +G + G CE C C G + CD
Sbjct: 1432 TTGECM-CPPNVIGDLCEKCAPNTYGFHQVI--G-CEECACNPMGIANGNS---QCDLFN 1484
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G C C+ ++ G CD C G++N C+ C C G+ CD I G C C+ V G
Sbjct: 1485 GTCECRQNIEGRACDVCSNGYFNF---PHCEQCSCHKPGTELEVCDKIDGACFCKKNVVG 1541
Query: 150 TRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCD 183
C+ C Y + DGC C C G S +CD
Sbjct: 1542 RDCDQCVDGTYNLQESNPDGCTTCFC--FGKTS-RCD 1575
Score = 210 (79.0 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 59/166 (35%), Positives = 76/166 (45%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS-CK 95
C G C+ C PGY+ D G C PC+C G ET CD TG CS C+
Sbjct: 1778 CPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECN--GHSET------CDCATGICSKCQ 1829
Query: 96 PHVVGTNCDQCEVGHY-NIISGE--GCKSCDCD-PVGSLN--RTCD-PITGQ---CLCRP 145
G +C++C G+Y N +G C C C P S N +C+ +G C C+P
Sbjct: 1830 HGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHCECKP 1889
Query: 146 GVTGTRCELCQPNHYGF--SLDG-CKPCMCDPIGSNSLQCDPSGQC 188
G TG RCE C YG S+ CKPC C S ++ + G C
Sbjct: 1890 GYTGPRCESCANGFYGEPESIGQVCKPCEC----SGNINPEDQGSC 1931
Score = 173 (66.0 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 42/126 (33%), Positives = 58/126 (46%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKP-HVVGTNCDQCEVGHYNIIS--GEGCKSCD 123
P + Y L ETF + C H+ D C+ +++ + G C+
Sbjct: 1318 PLKQYNDDLLVEETFDQT-KEFIQNCGHDHFHITHNASDFCKKSVFSLTADYNSGALPCN 1376
Query: 124 CDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
CD GS + C P GQC C+P V C C+ +YGF D CKPC C P NS C+
Sbjct: 1377 CDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFP-D-CKPCKC-P---NSAMCE 1430
Query: 184 PS-GQC 188
P+ G+C
Sbjct: 1431 PTTGEC 1436
Score = 156 (60.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + VG NC++C+ +Y + + C C CD S C+ TG C C
Sbjct: 365 GVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGH-CEEETGNCEC 423
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQ-CP 189
R C+ C +YG+ C+ C C+ G+N C+ SGQ CP
Sbjct: 424 RAAFQPPSCDSCAYGYYGYP--NCRECECNLNGTNGYHCEAESGQQCP 469
Score = 154 (59.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 39/106 (36%), Positives = 52/106 (49%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-G--CKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
+CSC P G +C+ C G+Y SG G C C+C+ G + TCD TG C C+ G
Sbjct: 1775 RCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECN--GH-SETCDCATGICSKCQHG 1831
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMCD-PIGSNSL--QCDPS 185
G CE C +YG + +G C C C P SN+ C+ S
Sbjct: 1832 TEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEIS 1877
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/93 (34%), Positives = 42/93 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C G QCD C ++ K C PC C G + F C+ TG
Sbjct: 2032 TGHCA-CKSGVTGRQCDRCAVDHW----KYEKDGCTPCNCN-QGY--SRGFG--CNPNTG 2081
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCD 123
+C C P V+G CD C + +I EGC+ C+
Sbjct: 2082 KCQCLPGVIGDRCDACP-NRWVLIKDEGCQECN 2113
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 392 (143.0 bits), Expect = 1.6e-34, P = 1.6e-34
Identities = 68/159 (42%), Positives = 100/159 (62%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CLKC+ +T GP C+ C GY+GDA+ + +C+ C CY G+L T +C+ +TG
Sbjct: 870 TGECLKCVGHTAGPHCERCRDGYYGDAIQ--EKNCQACGCYSNGSLST-----ICNLITG 922
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CK +VVG CD+C+ G++ I SGEGC+ C+C+ G+L+ +CD G+C C GVTG
Sbjct: 923 QCECKHNVVGKTCDRCQEGYHGINSGEGCRPCECNQSGALSASCDE-EGRCQCITGVTGD 981
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
+C+ C +Y F +GC C C N C+ +G+C
Sbjct: 982 KCDRCHHGYYNFKENGCTACDCAHTHGN---CNGQTGEC 1017
Score = 303 (111.7 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 65/171 (38%), Positives = 89/171 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD-QLTG 90
G+CL C +NT GP CD CLPG++GDA DC+ C C P TL + F+P C Q G
Sbjct: 758 GECLGCAHNTTGPHCDQCLPGFYGDASEGTPDDCQRCSC--PLTLASNNFSPTCQLQAPG 815
Query: 91 Q--CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQC 141
+ C C+ G C +C G++ ++ G+ C C+C DP R CD TG+C
Sbjct: 816 EFICDQCQSGYTGDKCQRCADGYFGEPVVPGQRCSPCECNGNVDP-SEAGR-CDTHTGEC 873
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDP-SGQC 188
L C G CE C+ +YG ++ C+ C C GS S C+ +GQC
Sbjct: 874 LKCVGHTAGPHCERCRDGYYGDAIQEKNCQACGCYSNGSLSTICNLITGQC 924
Score = 261 (96.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 57/175 (32%), Positives = 79/175 (45%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPG 74
C S L + G C +CI G +CD C GY+ + C C C + G
Sbjct: 954 CECNQSGALSASCDEEGRC-QCITGVTGDKCDRCHHGYYN----FKENGCTACDCAHTHG 1008
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
C+ TG+C C PH G C+QC+ GH+ GCK C+C VGS + C
Sbjct: 1009 N---------CNGQTGECICPPHTHGLKCEQCDEGHWGHDGVSGCKVCNCSVVGSSSSQC 1059
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
D +GQC+C +G C+ C + F C C C+P G+ + CD + G C
Sbjct: 1060 DLSSGQCVCALQFSGLTCDRCALGYRNFPQ--CSACDCNPNGTRAQFCDEALGVC 1112
Score = 236 (88.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 49/136 (36%), Positives = 68/136 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C +NT G C C GY+G DC C C + G ++F+ C L G
Sbjct: 1420 TGQCLGCQHNTAGEHCHVCAAGYYGKVQG-SVSDCSLCACPLRG----QSFSSTC-VLEG 1473
Query: 91 ----QCS-CKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLC 143
+C C+ G C++C VG++ S G C+ C C GS++ CD TG+C C
Sbjct: 1474 AGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSVCDAHTGRCEC 1533
Query: 144 RPGVTGTRCELCQPNH 159
+PGV G C+ C+ H
Sbjct: 1534 KPGVRGHLCDQCEERH 1549
Score = 234 (87.4 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 52/156 (33%), Positives = 79/156 (50%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
G TG+C+ C +T G +C+ C G++G D ++ C+ C C + G+ ++ CD
Sbjct: 1012 GQTGECI-CPPHTHGLKCEQCDEGHWGHDGVS----GCKVCNCSVVGSSSSQ-----CDL 1061
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG-------- 139
+GQC C G CD+C +G+ N C +CDC+P G+ + CD G
Sbjct: 1062 SSGQCVCALQFSGLTCDRCALGYRNFPQ---CSACDCNPNGTRAQFCDEALGVCGCEDHG 1118
Query: 140 QCLCRPGVTGTRCELCQPNHYGFS-LD--GCKPCMC 172
QC C+ V G C+ C+ +G S L+ GC PC C
Sbjct: 1119 QCSCKDNVGGRGCDECKSGSFGLSALNPAGCSPCFC 1154
Score = 221 (82.9 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 48/152 (31%), Positives = 68/152 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTL------ETETFTP 83
G C+ C +NT G C+TC GY+ P + C CQC + G++ + P
Sbjct: 366 GVCVNCRHNTAGVNCETCADGYYRPHQVSPYAEEPCVECQCDMRGSVSPVCIRDDNHANP 425
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
GQC CK G CD+C G + C C+C+ GS N DP +C+C
Sbjct: 426 DAGLSPGQCVCKEGFAGEKCDRCAFGFRDF---PVCSRCECNLDGSHNT--DPCM-ECVC 479
Query: 144 RPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
+ V G+ C+LC+ Y +GC C C
Sbjct: 480 KANVMGSHCDLCKQGFYNLQASNPEGCTECFC 511
Score = 200 (75.5 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 63/207 (30%), Positives = 95/207 (45%)
Query: 2 SLDVHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALP 61
+L + HVS L VG + + ++ C +C + G C+ C+PG++ L
Sbjct: 685 TLRLSHVS-----LGVGDSNSDVSKISLDVEHC-ECPWGYSGTSCELCIPGFYRVGGILF 738
Query: 62 KGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEG-- 118
G+C PC+C TE CD + G+C C + G +CDQC G Y S EG
Sbjct: 739 GGNCLPCEC---NDHATE-----CD-INGECLGCAHNTTGPHCDQCLPGFYGDAS-EGTP 788
Query: 119 --CKSCDCDPVGSLNR---TCD-PITGQCLC---RPGVTGTRCELCQPNHYGFSL-DG-- 166
C+ C C + N TC G+ +C + G TG +C+ C ++G + G
Sbjct: 789 DDCQRCSCPLTLASNNFSPTCQLQAPGEFICDQCQSGYTGDKCQRCADGYFGEPVVPGQR 848
Query: 167 CKPCMC----DPIGSNSLQCDP-SGQC 188
C PC C DP S + +CD +G+C
Sbjct: 849 CSPCECNGNVDP--SEAGRCDTHTGEC 873
Score = 181 (68.8 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 56/175 (32%), Positives = 75/175 (42%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALAL--PKGDCEPC-QCYIPGTLETETFTPVCDQLTGQC 92
+C G C C PGY+ A++ KG P Q +P + CD TGQC
Sbjct: 1366 ECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVP--CRCSNHSQSCDLHTGQC 1423
Query: 93 -SCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVG-SLNRTCDPITG----QC-LC 143
C+ + G +C C G+Y + G C C C G S + TC + G +C C
Sbjct: 1424 LGCQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCACPLRGQSFSSTC-VLEGAGDFRCDRC 1482
Query: 144 RPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSLQCDP-SGQC---PGV 191
G G CE C ++G S G C+ C C GS CD +G+C PGV
Sbjct: 1483 EEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSVCDAHTGRCECKPGV 1537
Score = 142 (55.0 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 42/127 (33%), Positives = 60/127 (47%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET--ETFTPVCD- 86
++G C+ C G CD C GY P+ C C C GT + VC
Sbjct: 1062 SSGQCV-CALQFSGLTCDRCALGYRN----FPQ--CSACDCNPNGTRAQFCDEALGVCGC 1114
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
+ GQCSCK +V G CD+C+ G + + ++ GC C C G L+ C+ ++G L R
Sbjct: 1115 EDHGQCSCKDNVGGRGCDECKSGSFGLSALNPAGCSPCFC--FG-LSDVCEELSG--LVR 1169
Query: 145 -PGVTGT 150
P V G+
Sbjct: 1170 APIVLGS 1176
Score = 137 (53.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 28 AGTT-GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD 86
AG + G C+ C G +CD C G F D P C C+C + G+ T+ P C
Sbjct: 427 AGLSPGQCV-CKEGFAGEKCDRCAFG-FRD---FPV--CSRCECNLDGSHNTD---P-CM 475
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPITGQCLCR 144
+ C CK +V+G++CD C+ G YN+ + EGC C C V + + + + R
Sbjct: 476 E----CVCKANVMGSHCDLCKQGFYNLQASNPEGCTECFCFGVSDVCESSTWFSSSVVHR 531
Query: 145 PGV 147
GV
Sbjct: 532 DGV 534
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 32/101 (31%), Positives = 44/101 (43%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN-IISGEGCKSCD------CDPVGSLN--RTCDPITGQCL 142
C C P G +C +C G+Y +S K + C P N ++CD TGQCL
Sbjct: 1365 CECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCSNHSQSCDLHTGQCL 1424
Query: 143 -CRPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNS 179
C+ G C +C +YG S+ C C C P+ S
Sbjct: 1425 GCQHNTAGEHCHVCAAGYYGKVQGSVSDCSLCAC-PLRGQS 1464
Score = 104 (41.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 23/58 (39%), Positives = 30/58 (51%)
Query: 141 CLCRPGVTGTRCELCQPNHY---GFSLDG-CKPCMCDPIGSNSLQCDPSGQCPGVFMN 194
C C G +GT CELC P Y G G C PC C+ ++ +CD +G+C G N
Sbjct: 712 CECPWGYSGTSCELCIPGFYRVGGILFGGNCLPCECN---DHATECDINGECLGCAHN 766
Score = 102 (41.0 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 32/122 (26%), Positives = 48/122 (39%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL---ALP 61
+ +SV + +C G C+ C +NT G C+ C PGY + L
Sbjct: 268 IKDISVGGMCICYGHAQSCPWDPVTKKLQCV-CEHNTCGESCNECCPGYHQEPWQPGTLS 326
Query: 62 KGD-CEPCQC--------YIPGTLETETFTPVCDQLTGQ--C-SCKPHVVGTNCDQCEVG 109
G+ CE C C Y + + Q TG C +C+ + G NC+ C G
Sbjct: 327 DGNTCEKCNCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETCADG 386
Query: 110 HY 111
+Y
Sbjct: 387 YY 388
Score = 80 (33.2 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 141 CLCRPGVTGTRCELCQPNHYG-----FSLDG--------CKPCMCDPIGSNSLQCD-PSG 186
C C PG G C+ C P +Y ++ G C PC C ++S CD +G
Sbjct: 1365 CECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVPCRCS---NHSQSCDLHTG 1421
Query: 187 QCPGVFMNRA 196
QC G N A
Sbjct: 1422 QCLGCQHNTA 1431
Score = 63 (27.2 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 23/81 (28%), Positives = 30/81 (37%)
Query: 113 IISGEGCKSCD-CDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP-- 169
++ G G CD C+ G R C+ P G RC++C + G C
Sbjct: 1470 VLEGAGDFRCDRCEE-GYEGRYCERCAVGYFGNPSEPGGRCQVCACSESGSVHSVCDAHT 1528
Query: 170 --CMCDPIGSNSLQCDPSGQC 188
C C P G CD QC
Sbjct: 1529 GRCECKP-GVRGHLCD---QC 1545
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 384 (140.2 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 71/161 (44%), Positives = 90/161 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQL 88
TG CLKC+Y+T G C C GY+GDAL + DC C C GT++ CD+
Sbjct: 1007 TGRCLKCLYHTEGVHCQLCRLGYYGDAL---QQDCRKCVCNYLGTVQEHCNGSDCQCDKT 1063
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQC C P+V+G NCD+C + + SG GC+ C+CD S +C+ TGQC C PG
Sbjct: 1064 TGQCLCLPNVIGQNCDRCAPNTWQLASGTGCEPCNCDAAHSFGPSCNEFTGQCQCMPGFG 1123
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C CQ +G C+ C CDP G + QCD S GQC
Sbjct: 1124 GRTCSECQELFWGDPSVECRACDCDPRGIETPQCDQSTGQC 1164
Score = 321 (118.1 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 70/176 (39%), Positives = 94/176 (53%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFG--DALALPKGDCEPCQCYIPGTLE---TET 80
+V+G G C C +NT G C+ C P Y+ + CEPC C G+ +
Sbjct: 369 NVSG--GVCDDCQHNTMGRNCERCKPFYYQHPERDVRDPNLCEPCTCDPAGSQNGGICDG 426
Query: 81 FTPVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTCD 135
+T L GQC CK HV G +CD C+ G Y + + + GCKSC C+P+G++ CD
Sbjct: 427 YTDFSAGLIAGQCRCKLHVEGEHCDICKEGFYGLTAEDPFGCKSCACNPLGTIPGGNPCD 486
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCDP-SGQC 188
TG C C+ VTG C+ C P H+G S LDGC+PC CD G+ + C SGQC
Sbjct: 487 SETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSAESGQC 542
Score = 280 (103.6 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 59/141 (41%), Positives = 72/141 (51%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG CL C+ N G CD C P + LA G CEPC C +F P C++ T
Sbjct: 1063 TTGQCL-CLPNVIGQNCDRCAPNTW--QLASGTG-CEPCNCDA-----AHSFGPSCNEFT 1113
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C P G C +C+ + S E C++CDCDP G CD TGQC+C GV G
Sbjct: 1114 GQCQCMPGFGGRTCSECQELFWGDPSVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEG 1172
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C + G D C PC
Sbjct: 1173 PRCDKCTRGYSGVFPD-CTPC 1192
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 63/184 (34%), Positives = 92/184 (50%)
Query: 11 MDILLCVGPPSD-ILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDC 65
+DI VG D ++ + A +C+ N+ P D C F + L +
Sbjct: 726 LDIFT-VGSSGDGVVTNSAWEMFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGL 784
Query: 66 EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCD 125
C+C G+L + VCD GQC C+P+VVG CD+C G + GCK C+C
Sbjct: 785 A-CECDPQGSLSS-----VCDPNGGQCQCRPNVVGRKCDRCAPGTFGF-GPNGCKPCECH 837
Query: 126 PVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP- 184
GS+N CDP+TGQC C GV +C+ C P ++GF C+PC C+ ++ CD
Sbjct: 838 LQGSVNAFCDPVTGQCHCFQGVYARQCDRCLPGYWGFP--SCQPCQCN---GHAEDCDSV 892
Query: 185 SGQC 188
+G+C
Sbjct: 893 TGEC 896
Score = 263 (97.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 53/135 (39%), Positives = 72/135 (53%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C + G CD C G++G P G C+ C C GT+ P CD TG
Sbjct: 437 GQC-RCKLHVEGEHCDICKEGFYGLTAEDPFG-CKSCACNPLGTIPGGN--P-CDSETGY 491
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK V G +CDQC H+ + + +GC+ CDCD G+LN +C +GQCLCRP + G
Sbjct: 492 CYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSAESGQCLCRPHMIGR 551
Query: 151 RCELCQPNHYGFSLD 165
+C + Y +LD
Sbjct: 552 QCNEVESGFYFTTLD 566
Score = 263 (97.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 60/170 (35%), Positives = 85/170 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVC--DQ 87
TG+C C T G C+ CL GY+GDA+ + GD C PC C G F C D
Sbjct: 893 TGECSSCQDYTTGHNCERCLAGYYGDAI-IGSGDHCRPCPCP-DGPESGRQFASSCYQDP 950
Query: 88 LTGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDP-VGSLN-RTCDPITGQC 141
+T Q C C P +G+ C+ C G + S G C+ C C + + + CD TG+C
Sbjct: 951 VTLQLACVCNPGYIGSRCEDCAAGFFGNPSEVGGTCQPCQCHHNIDTTDPEACDKETGRC 1010
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDPSG-QC 188
L C G C+LC+ +YG +L C+ C+C+ +G+ C+ S QC
Sbjct: 1011 LKCLYHTEGVHCQLCRLGYYGDALQQDCRKCVCNYLGTVQEHCNGSDCQC 1060
Score = 223 (83.6 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
+C+CDP GSL+ CDP GQC CRP V G +C+ C P +GF +GCKPC C GS +
Sbjct: 785 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFGFGPNGCKPCECHLQGSVNA 844
Query: 181 QCDP-SGQC---PGVFMNRAE 197
CDP +GQC GV+ + +
Sbjct: 845 FCDPVTGQCHCFQGVYARQCD 865
Score = 195 (73.7 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 54/195 (27%), Positives = 82/195 (42%)
Query: 19 PPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIP 73
P + V G G C+ C +NT G C+ C+ Y + A C+ C C
Sbjct: 295 PVDGFSEEVEGMVHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH 353
Query: 74 GT---LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDC 124
+ + + + G C C+ + +G NC++C+ +Y ++ C+ C C
Sbjct: 354 SSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHPERDVRDPNLCEPCTC 413
Query: 125 DPVGSLNR-TCDPIT--------GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
DP GS N CD T GQC C+ V G C++C+ YG + + DP
Sbjct: 414 DPAGSQNGGICDGYTDFSAGLIAGQCRCKLHVEGEHCDICKEGFYGLTAE-------DPF 466
Query: 176 GSNSLQCDPSGQCPG 190
G S C+P G PG
Sbjct: 467 GCKSCACNPLGTIPG 481
Score = 144 (55.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 50/170 (29%), Positives = 67/170 (39%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPV--C 85
TG C C QCD CLPGY+G P G E C + +T C
Sbjct: 850 TGQC-HCFQGVYARQCDRCLPGYWGFPSCQPCQCNGHAEDCDSVTGECSSCQDYTTGHNC 908
Query: 86 DQ-LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
++ L G G +C C + SC DPV +L C +C
Sbjct: 909 ERCLAGYYGDAIIGSGDHCRPCPCPDGPESGRQFASSCYQDPV-TLQLAC-------VCN 960
Query: 145 PGVTGTRCELCQPNHYG--FSLDG-CKPCMCDP-IGSNSLQ-CDP-SGQC 188
PG G+RCE C +G + G C+PC C I + + CD +G+C
Sbjct: 961 PGYIGSRCEDCAAGFFGNPSEVGGTCQPCQCHHNIDTTDPEACDKETGRC 1010
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 384 (140.2 bits), Expect = 5.9e-34, P = 5.9e-34
Identities = 72/161 (44%), Positives = 91/161 (56%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
TG CLKC+Y+T G C C GY+GDAL + DC C C GT+ C D+
Sbjct: 1042 TGRCLKCLYHTEGDHCQFCQHGYYGDAL---RQDCRKCVCNYLGTVREHCNGSDCHCDKT 1098
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQCSC P+V+G NCD+C + + SG GC+ C+C+ V S +C+ TGQC C PG
Sbjct: 1099 TGQCSCLPNVIGQNCDRCAPHTWQLASGTGCEPCNCNAVHSFGPSCNEFTGQCQCMPGFG 1158
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C CQ +G C+ C CDP G + QCD S GQC
Sbjct: 1159 GRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQC 1199
Score = 329 (120.9 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 74/180 (41%), Positives = 98/180 (54%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD------CEPCQCYIPGTLE-- 77
+V+G G C C +NT G C+ C P YF P+ D CEPC C G+
Sbjct: 404 NVSG--GVCDNCQHNTMGRNCEQCKPFYFQH----PERDIRDPNLCEPCTCDPAGSENGG 457
Query: 78 -TETFTPVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--N 131
+ +T L GQC CK HV G CD C+ G Y++ + + GCKSC C+P+G++
Sbjct: 458 ICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGG 517
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQC-DPSGQC 188
CD TG C C+ VTG RC+ C P H+G S LDGC+PC CD G+ + C + SGQC
Sbjct: 518 NPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQC 577
Score = 271 (100.5 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 57/141 (40%), Positives = 70/141 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C C+ N G CD C P + LA G CEPC C +F P C++ T
Sbjct: 1098 TTGQC-SCLPNVIGQNCDRCAPHTW--QLASGTG-CEPCNCNA-----VHSFGPSCNEFT 1148
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C P G C +C+ + E C++CDCDP G CD TGQC+C GV G
Sbjct: 1149 GQCQCMPGFGGRTCSECQELFWGDPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEG 1207
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C + G D C PC
Sbjct: 1208 PRCDKCTRGYSGVFPD-CTPC 1227
Score = 261 (96.9 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 59/166 (35%), Positives = 83/166 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVC--DQ 87
TG+CL C T G C+ CL GY+GD + + GD C PC C G F C D
Sbjct: 928 TGECLSCQDYTTGHNCERCLAGYYGDPI-IGSGDHCRPCPCP-DGPDSGRQFARSCYQDP 985
Query: 88 LTGQ--CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDP-VGSLN-RTCDPITGQC 141
+T Q C C P +G+ CD C G++ S G C+ C C + + + CD TG+C
Sbjct: 986 VTLQLACVCDPGYIGSRCDGCASGYFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRC 1045
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPS 185
L C G C+ CQ +YG +L C+ C+C+ +G+ C+ S
Sbjct: 1046 LKCLYHTEGDHCQFCQHGYYGDALRQDCRKCVCNYLGTVREHCNGS 1091
Score = 260 (96.6 bits), Expect = 9.2e-21, P = 9.2e-21
Identities = 58/183 (31%), Positives = 88/183 (48%)
Query: 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDCE 66
+DI G + + A T +C+ N+ P D C F + + +
Sbjct: 761 LDIFTVGGSGDGEVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQAGLA 820
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
C+C G+L + VCD GQC C+P+VVG C++C G + GCK CDC
Sbjct: 821 -CECDPQGSLSS-----VCDPNGGQCQCRPNVVGRTCNRCAPGTFGF-GPNGCKPCDCHL 873
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GS++ CD +TGQC C G+ +C+ C P +GF C+PC C+ ++ CD +
Sbjct: 874 QGSVSAFCDAVTGQCHCFQGIYARQCDRCLPGFWGFP--SCQPCQCN---GHAEDCDTVT 928
Query: 186 GQC 188
G+C
Sbjct: 929 GEC 931
Score = 251 (93.4 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 52/141 (36%), Positives = 73/141 (51%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
SV G C +C + G +CD C G++ + P G C+ C C GT+ P C
Sbjct: 466 SVGLIAGQC-RCKLHVEGERCDVCKEGFYDLSAEDPFG-CKSCACNPLGTIPGGN--P-C 520
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR 144
D TG C CK V G CDQC H+ + + +GC+ CDCD G+LN +C +GQC C
Sbjct: 521 DSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCL 580
Query: 145 PGVTGTRCELCQPNHYGFSLD 165
P + G +C + +Y +LD
Sbjct: 581 PHMIGRQCNEVESGYYFTTLD 601
Score = 198 (74.8 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 19 PPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIP 73
P + V G G C+ C +NT G C+ C+ Y + A C+ C C
Sbjct: 330 PVDGFNEEVEGMVHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH 388
Query: 74 GT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDC 124
+ + F + G C +C+ + +G NC+QC+ ++ +I C+ C C
Sbjct: 389 SSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTC 448
Query: 125 DPVGSLNR-TCDPIT--------GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
DP GS N CD T GQC C+ V G RC++C+ Y S + DP
Sbjct: 449 DPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAE-------DPF 501
Query: 176 GSNSLQCDPSGQCPG 190
G S C+P G PG
Sbjct: 502 GCKSCACNPLGTIPG 516
Score = 149 (57.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/170 (28%), Positives = 69/170 (40%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPV--C 85
TG C C QCD CLPG++G P G E C L + +T C
Sbjct: 885 TGQC-HCFQGIYARQCDRCLPGFWGFPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNC 943
Query: 86 DQLTGQCSCKPHV-VGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
++ P + G +C C + +SC DPV +L C +C
Sbjct: 944 ERCLAGYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPV-TLQLAC-------VCD 995
Query: 145 PGVTGTRCELCQPNHYGFSLD---GCKPCMCDP-IGSNSLQ-CDP-SGQC 188
PG G+RC+ C ++G D C+PC C I + + CD +G+C
Sbjct: 996 PGYIGSRCDGCASGYFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRC 1045
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 381 (139.2 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 71/161 (44%), Positives = 88/161 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQL 88
TG CLKC+Y+T G C C GY+GDAL + DC C C GT++ CD+
Sbjct: 1006 TGRCLKCLYHTEGEHCQLCRFGYYGDAL---RQDCRKCVCNYLGTVQEHCNGSDCQCDKT 1062
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQC C P+V+G NCD+C + + SG GC C CD S +C+ TGQC C PG
Sbjct: 1063 TGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCSCDAAHSFGPSCNEFTGQCHCMPGFG 1122
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C CQ +G C+ C CDP G + QCD S GQC
Sbjct: 1123 GRTCSECQELFWGDPSVECRACDCDPRGIETPQCDQSTGQC 1163
Score = 308 (113.5 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 70/180 (38%), Positives = 96/180 (53%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD------CEPCQCYIPGTLE-- 77
+V+G G C C +NT G C+ C P Y+ P+ D CE C C G+
Sbjct: 368 NVSG--GVCDDCQHNTMGRNCEQCKPFYYQH----PERDIRDPSLCEQCTCDPAGSQNGG 421
Query: 78 -TETFTPVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--N 131
+++T L GQC CK +V G +CD C+ G Y + + + GCKSC C+P+G++
Sbjct: 422 ICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPFGCKSCACNPLGTIPGG 481
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCDP-SGQC 188
CD TG C C+ VTG C+ C P H+G S LDGC+PC CD G+ + C SGQC
Sbjct: 482 NPCDSETGYCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDIGGALNNSCSAESGQC 541
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 58/141 (41%), Positives = 72/141 (51%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG CL C+ N G CD C P + LA G C+PC C +F P C++ T
Sbjct: 1062 TTGQCL-CLPNVIGQNCDRCAPNTW--QLASGTG-CDPCSCDA-----AHSFGPSCNEFT 1112
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C P G C +C+ + S E C++CDCDP G CD TGQC+C GV G
Sbjct: 1113 GQCHCMPGFGGRTCSECQELFWGDPSVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEG 1171
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C + G D C PC
Sbjct: 1172 PRCDKCTRGYSGVFPD-CTPC 1191
Score = 274 (101.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 62/183 (33%), Positives = 90/183 (49%)
Query: 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDCE 66
+DI G ++ + A T +C+ N+ P D C F + L +
Sbjct: 725 LDIFTVGGSGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLA 784
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
C+C G+L + VCD GQC C+P+VVG CD+C G + GCK C+C
Sbjct: 785 -CECDPQGSLSS-----VCDPNGGQCQCRPNVVGRRCDRCAPGTFGF-GPSGCKPCECHL 837
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GS++ CDPITGQC C GV +C+ C P +GF C+PC C+ ++ CD +
Sbjct: 838 QGSVSAFCDPITGQCHCFQGVYTRQCDRCLPGFWGFP--SCQPCQCN---GHADDCDSVT 892
Query: 186 GQC 188
G+C
Sbjct: 893 GEC 895
Score = 264 (98.0 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 53/135 (39%), Positives = 73/135 (54%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C G CD C G++G + P G C+ C C GT+ P CD TG
Sbjct: 436 GQC-RCKLYVEGEHCDICKEGFYGLSAEDPFG-CKSCACNPLGTIPGGN--P-CDSETGY 490
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK V G +CDQC H+ + + +GC+ CDCD G+LN +C +GQCLCRP + G
Sbjct: 491 CYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDIGGALNNSCSAESGQCLCRPHMIGR 550
Query: 151 RCELCQPNHYGFSLD 165
+C + +Y +LD
Sbjct: 551 QCSEVESGYYFTTLD 565
Score = 262 (97.3 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 60/170 (35%), Positives = 86/170 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVC--DQ 87
TG+CL C T G C+ CL GY+GD + + GD C PC C G F C D
Sbjct: 892 TGECLSCQDYTTGHNCERCLAGYYGDPV-IGSGDHCRPCPCP-DGPESGRQFASSCYQDP 949
Query: 88 LTGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDP-VGSLN-RTCDPITGQC 141
++ Q C C P +G+ CD+C G + S G C+ C C + + + CD TG+C
Sbjct: 950 VSLQLACVCNPGYIGSRCDECASGFFGNPSDVGGTCQPCQCHHNIDTADPEACDKETGRC 1009
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSG-QC 188
L C G C+LC+ +YG +L C+ C+C+ +G+ C+ S QC
Sbjct: 1010 LKCLYHTEGEHCQLCRFGYYGDALRQDCRKCVCNYLGTVQEHCNGSDCQC 1059
Score = 228 (85.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 41/81 (50%), Positives = 50/81 (61%)
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
+C+CDP GSL+ CDP GQC CRP V G RC+ C P +GF GCKPC C GS S
Sbjct: 784 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRRCDRCAPGTFGFGPSGCKPCECHLQGSVSA 843
Query: 181 QCDP-SGQC---PGVFMNRAE 197
CDP +GQC GV+ + +
Sbjct: 844 FCDPITGQCHCFQGVYTRQCD 864
Score = 206 (77.6 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 57/195 (29%), Positives = 83/195 (42%)
Query: 19 PPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIP 73
P + + V G G C+ C +NT G C+ C+ Y + A C+ C C
Sbjct: 294 PVDGVNEEVEGMVHGHCM-CRHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEH 352
Query: 74 GT---LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDC 124
+ + + + G C C+ + +G NC+QC+ +Y +I C+ C C
Sbjct: 353 SSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSLCEQCTC 412
Query: 125 DPVGSLNR-TCDPIT--------GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
DP GS N CD T GQC C+ V G C++C+ YG S + DP
Sbjct: 413 DPAGSQNGGICDSYTDFSAGLIAGQCRCKLYVEGEHCDICKEGFYGLSAE-------DPF 465
Query: 176 GSNSLQCDPSGQCPG 190
G S C+P G PG
Sbjct: 466 GCKSCACNPLGTIPG 480
Score = 143 (55.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/170 (28%), Positives = 68/170 (40%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPV--C 85
TG C C QCD CLPG++G P G + C L + +T C
Sbjct: 849 TGQC-HCFQGVYTRQCDRCLPGFWGFPSCQPCQCNGHADDCDSVTGECLSCQDYTTGHNC 907
Query: 86 DQLTGQCSCKPHV-VGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
++ P + G +C C + SC DPV SL C +C
Sbjct: 908 ERCLAGYYGDPVIGSGDHCRPCPCPDGPESGRQFASSCYQDPV-SLQLAC-------VCN 959
Query: 145 PGVTGTRCELCQPNHYGFSLD-G--CKPCMCDP-IGSNSLQ-CDP-SGQC 188
PG G+RC+ C +G D G C+PC C I + + CD +G+C
Sbjct: 960 PGYIGSRCDECASGFFGNPSDVGGTCQPCQCHHNIDTADPEACDKETGRC 1009
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 380 (138.8 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 71/161 (44%), Positives = 90/161 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
TG CLKC+Y+T G C C GY+GDAL + DC C C GT++ C D+
Sbjct: 994 TGRCLKCLYHTEGDHCQLCQYGYYGDAL---RQDCRKCVCNYLGTVKEHCNGSDCHCDKA 1050
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQCSC P+V+G NCD+C + + SG GC C+C+ S +C+ TGQC C PG
Sbjct: 1051 TGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQCQCMPGFG 1110
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C CQ +G C+ C CDP G + QCD S GQC
Sbjct: 1111 GRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQC 1151
Score = 329 (120.9 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 74/180 (41%), Positives = 98/180 (54%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD------CEPCQCYIPGTLE-- 77
+V+G G C C +NT G C+ C P YF P+ D CEPC C G+
Sbjct: 356 NVSG--GVCDNCQHNTMGRNCEQCKPFYFQH----PERDIRDPNLCEPCTCDPAGSENGG 409
Query: 78 -TETFTPVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--N 131
+ +T L GQC CK HV G CD C+ G Y++ + + GCKSC C+P+G++
Sbjct: 410 ICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGG 469
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQC-DPSGQC 188
CD TG C C+ VTG RC+ C P H+G S LDGC+PC CD G+ + C + SGQC
Sbjct: 470 NPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQC 529
Score = 268 (99.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 63/184 (34%), Positives = 89/184 (48%)
Query: 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFG-DALALPKGDC 65
+DI G + + A T +C+ N+ P D C F AL G
Sbjct: 713 LDIFTVGGSGDGEVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLA 772
Query: 66 EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCD 125
C+C G+L + VCD GQC C+P+VVG C++C G + GCK CDC
Sbjct: 773 --CECDPQGSLSS-----VCDPNGGQCQCRPNVVGRTCNRCAPGTFGF-GPNGCKPCDCH 824
Query: 126 PVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP- 184
GS + CD ITGQC C G+ +C+ C P ++GF C+PC C+ ++L CD
Sbjct: 825 LQGSASAFCDAITGQCHCFQGIYARQCDRCLPGYWGFP--SCQPCQCN---GHALDCDTV 879
Query: 185 SGQC 188
+G+C
Sbjct: 880 TGEC 883
Score = 266 (98.7 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 62/171 (36%), Positives = 84/171 (49%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L SV G +C N G C+ C PG FG P G C+PC C++
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFG---PNG-CKPCDCHLQ 826
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G+ F CD +TGQC C + CD+C G++ S C+ C C+ +L+
Sbjct: 827 GS--ASAF---CDAITGQCHCFQGIYARQCDRCLPGYWGFPS---CQPCQCNG-HALD-- 875
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSL----DGCKPCMCDPIGSNS 179
CD +TG+CL C+ TG CE C +YG + D C+PC C P G +S
Sbjct: 876 CDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPC-PDGPDS 925
Score = 264 (98.0 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 60/166 (36%), Positives = 83/166 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVC--DQ 87
TG+CL C T G C+ CL GY+GD + + GD C PC C G F C D
Sbjct: 880 TGECLSCQDYTTGHNCERCLAGYYGDPI-IGSGDHCRPCPCP-DGPDSGRQFARSCYQDP 937
Query: 88 LTGQ--CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDP-VGSLN-RTCDPITGQC 141
+T Q C C P +G+ CD C G + S G C+ C C + + + CD TG+C
Sbjct: 938 VTLQLACVCDPGYIGSRCDDCASGFFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRC 997
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPS 185
L C G C+LCQ +YG +L C+ C+C+ +G+ C+ S
Sbjct: 998 LKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLGTVKEHCNGS 1043
Score = 261 (96.9 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 55/140 (39%), Positives = 68/140 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ N G CD C P + LA G C PC C +F P C++ TG
Sbjct: 1051 TGQC-SCLPNVIGQNCDRCAPNTW--QLASGTG-CGPCNCNA-----AHSFGPSCNEFTG 1101
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P G C +C+ + E C++CDCDP G CD TGQC+C GV G
Sbjct: 1102 QCQCMPGFGGRTCSECQELFWGDPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGP 1160
Query: 151 RCELCQPNHYGFSLDGCKPC 170
RC+ C + G D C PC
Sbjct: 1161 RCDKCTRGYSGVFPD-CTPC 1179
Score = 252 (93.8 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 52/141 (36%), Positives = 73/141 (51%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
SV G C +C + G +CD C G++ + P G C+ C C GT+ P C
Sbjct: 418 SVGLIAGQC-RCKLHVEGERCDVCKEGFYDLSAEDPYG-CKSCACNPLGTIPGGN--P-C 472
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR 144
D TG C CK V G CDQC H+ + + +GC+ CDCD G+LN +C +GQC C
Sbjct: 473 DSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCL 532
Query: 145 PGVTGTRCELCQPNHYGFSLD 165
P + G +C + +Y +LD
Sbjct: 533 PHMIGRQCNEVESGYYFTTLD 553
Score = 200 (75.5 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 57/195 (29%), Positives = 84/195 (43%)
Query: 19 PPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIP 73
P + + V G G C+ C +NT G C+ C+ Y + A C+ C C
Sbjct: 282 PVDGVNEEVEGMVHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH 340
Query: 74 GT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDC 124
+ + F + G C +C+ + +G NC+QC+ ++ +I C+ C C
Sbjct: 341 SSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTC 400
Query: 125 DPVGSLNR-TCDPIT--------GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
DP GS N CD T GQC C+ V G RC++C+ Y S + DP
Sbjct: 401 DPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAE-------DPY 453
Query: 176 GSNSLQCDPSGQCPG 190
G S C+P G PG
Sbjct: 454 GCKSCACNPLGTIPG 468
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 380 (138.8 bits), Expect = 1.6e-33, P = 1.6e-33
Identities = 73/168 (43%), Positives = 104/168 (61%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE--TFTPV-CDQ 87
TG+CL+C++NT GP+C +C GY+G+ALA DC+ C C GT +++ +P CDQ
Sbjct: 1072 TGECLRCLHNTEGPRCQSCKRGYYGNALAQ---DCKECSCDRRGTDDSKCPAGSPCFCDQ 1128
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC C+P V G C++C+ G++N+ GC+ C+C+ +LN CD ITGQCLC+P
Sbjct: 1129 DTGQCPCRPGVQGALCNECDDGYWNMDGDYGCQPCNCNREHALNYICDKITGQCLCQPEY 1188
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
G C+ C PNH+G C C C+ G+ CD +G+C PGV
Sbjct: 1189 GGRICDECGPNHFGNPDLQCMFCDCNLEGTVHPACDAYTGECLCKPGV 1236
Score = 304 (112.1 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 61/174 (35%), Positives = 94/174 (54%)
Query: 26 SVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGD---ALALPKGDCEPCQCYIPGTLETETF 81
+ G +G C C N GPQC+ C P Y+ D ++ P C PC C + G+++
Sbjct: 352 ATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYA-CIPCDCDLDGSVDRG-- 408
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLN--RTCDPI 137
+CD + GQC CK ++ G CD+C+VG Y + GC+ C C+ +G++ CDP
Sbjct: 409 --LCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNFLGTIQVGNPCDPT 466
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGF--SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
TG+C+C G++C+ C P ++G ++ GC PC CD G+ +C GQC
Sbjct: 467 TGRCICEHFAYGSQCDQCLPGYWGLGNTVYGCIPCDCDIGGALKTECSSVDGQC 520
Score = 275 (101.9 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 55/156 (35%), Positives = 70/156 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C++ GG G A C C+ G + C + GQC
Sbjct: 819 CIELAVQAGGQTLPEVCEMLIGSMSAFIHNGAVSCNCHHVGAYGSS-----CSKFGGQCQ 873
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
CKP+V+G CD C Y + GC CDCD GS CD TGQC CR G+TG +C
Sbjct: 874 CKPNVIGRCCDSCAPLTYGL-GPNGCSPCDCDRSGSTTELCDQTTGQCSCRDGITGLQCN 932
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C P +YGF L C+ C C+ + CDP +G C
Sbjct: 933 RCYPGYYGFPL--CRRCQCNRLADI---CDPITGDC 963
Score = 271 (100.5 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 61/169 (36%), Positives = 80/169 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY-IPGTLETETFTPVCDQLT 89
TGDCL C ++ G C+ C GY GD ++ CEPC C + G+ F+ D +
Sbjct: 960 TGDCLDCREHSAGRNCERCEEGYVGDPVS--GQPCEPCLCPDLNGSGRFFAFSCNKDPRS 1017
Query: 90 GQ--CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDC----DPVGSLNRTCDPITGQC 141
G C C P G CD C G Y + G CK C C DP CDP+TG+C
Sbjct: 1018 GAPYCECLPGHTGPQCDSCSPGFYGDLRLPGGRCKECCCNNNIDPRDG--DACDPVTGEC 1075
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
L C G RC+ C+ +YG +L CK C CD G++ +C C
Sbjct: 1076 LRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDSKCPAGSPC 1124
Score = 267 (99.0 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 62/167 (37%), Positives = 83/167 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C N G CD+C P +G L P G C PC C G+ T +CDQ TGQ
Sbjct: 870 GQC-QCKPNVIGRCCDSCAPLTYG--LG-PNG-CSPCDCDRSGST-----TELCDQTTGQ 919
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGT 150
CSC+ + G C++C G+Y C+ C C+ + + CDPITG CL CR G
Sbjct: 920 CSCRDGITGLQCNRCYPGYYGFPL---CRRCQCNRLADI---CDPITGDCLDCREHSAGR 973
Query: 151 RCELCQPNHYGFSLDG--CKPCMCDPI-GSN---SLQC--DPSGQCP 189
CE C+ + G + G C+PC+C + GS + C DP P
Sbjct: 974 NCERCEEGYVGDPVSGQPCEPCLCPDLNGSGRFFAFSCNKDPRSGAP 1020
Score = 265 (98.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 61/179 (34%), Positives = 85/179 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQL 88
TG C C G C+ C GY+ GD C+PC C L +CD++
Sbjct: 1130 TGQC-PCRPGVQGALCNECDDGYWN-----MDGDYGCQPCNCNREHALNY-----ICDKI 1178
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQC C+P G CD+C H+ + C CDC+ G+++ CD TG+CLC+PGVT
Sbjct: 1179 TGQCLCQPEYGGRICDECGPNHFGNPDLQ-CMFCDCNLEGTVHPACDAYTGECLCKPGVT 1237
Query: 149 GTRCELCQPNHYGFSLDGCKPC-MCDPIGS---NSLQCDPSG-----QCPGVFMNRAEM 198
G C+ C P H + C+PC C+ + + L D CP F +R E+
Sbjct: 1238 GPFCDECAPGHNN-NFPACEPCHACNHLWEKIISDLSLDAERIETMMPCPEDFRSRPEL 1295
Score = 258 (95.9 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/163 (35%), Positives = 82/163 (50%)
Query: 9 SVMDILLCVGPPSDILKSV-AG----TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG 63
SV D C+ D+ SV G G C+ C N G +CD C G++G + P G
Sbjct: 387 SVDDPYACIPCDCDLDGSVDRGLCDPVNGQCV-CKQNIEGERCDRCKVGFYGFSRDDPSG 445
Query: 64 DCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSC 122
C+ C+C GT++ P CD TG+C C+ G+ CDQC G++ + + GC C
Sbjct: 446 -CQLCRCNFLGTIQVGN--P-CDPTTGRCICEHFAYGSQCDQCLPGYWGLGNTVYGCIPC 501
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD 165
DCD G+L C + GQC CRP + G +C P ++ LD
Sbjct: 502 DCDIGGALKTECSSVDGQCKCRPNMVGQKCNDPAPGYFLAPLD 544
Score = 243 (90.6 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 58/178 (32%), Positives = 88/178 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP--KGD---CEPCQCYIPGT---LETETFTP 83
G C+ C +NT G C+ C ++ DA P K D C+ C C+ E +
Sbjct: 295 GRCV-CQHNTAGYNCERC-QDFYHDAPWRPGGKADSDVCKRCNCHSHSEKCHFELARYLA 352
Query: 84 VCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNR-TCDP 136
G C C+ + +G C+ C +Y ++ C CDCD GS++R CDP
Sbjct: 353 TGGVSGGVCDDCRNNRIGPQCELCGPFYYQDPQRSVDDPYACIPCDCDLDGSVDRGLCDP 412
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSL--QCDPS-GQC 188
+ GQC+C+ + G RC+ C+ YGFS D GC+ C C+ +G+ + CDP+ G+C
Sbjct: 413 VNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNFLGTIQVGNPCDPTTGRC 470
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 383 (139.9 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 74/176 (42%), Positives = 100/176 (56%)
Query: 16 CVG--PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G P+ + S TG C+ C+++T G +C+ C PG++GDA+A +C C C
Sbjct: 1949 CSGNTDPNMLFSSCDSLTGTCMGCMHHTAGVRCEVCAPGFYGDAVAAK--NCTQCNCSPC 2006
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
GT C TGQC CK V G +CD CE G+Y GC+ CDCD VG++ +
Sbjct: 2007 GT-------DSCHPQTGQCFCKAGVTGQHCDHCEEGYYGFEGCSGCRRCDCD-VGAMGSS 2058
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C TGQC C PGV+G+RC+ C P ++GFS GC+ C C GS CDP +G+C
Sbjct: 2059 CHAQTGQCHCLPGVSGSRCQQCAPGYWGFSERGCRKCECRG-GS----CDPRTGEC 2109
Score = 294 (108.6 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 63/170 (37%), Positives = 85/170 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL-- 88
+G CL C +NT G C+ C GY G A C C C P ++ + F C
Sbjct: 1854 SGICLNCQHNTEGDHCEQCKDGYVGSRNADGSLQCVGCPC--PLSVASNNFAIGCVHKGS 1911
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQCL 142
+ QC CKP G NC++C G+Y ++ G C+ CDC DP L +CD +TG C+
Sbjct: 1912 STQCLCKPGYAGPNCERCAPGYYGNPLVIGSSCQPCDCSGNTDP-NMLFSSCDSLTGTCM 1970
Query: 143 -CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
C G RCE+C P YG ++ C C C P G++S C P +GQC
Sbjct: 1971 GCMHHTAGVRCEVCAPGFYGDAVAAKNCTQCNCSPCGTDS--CHPQTGQC 2018
Score = 292 (107.8 bits), Expect = 8.3e-24, P = 8.3e-24
Identities = 62/147 (42%), Positives = 76/147 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C +T P+C C P FG P CE C C PG E CD +G
Sbjct: 1476 TGQCI-CPPHTLKPECVVCEPQTFG---CHPLIGCEDCNCSQPGVQELTELG--CDVDSG 1529
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP+V+G CD C G+Y+ S C+ CDC P G+ CDP+TGQC C+ V G
Sbjct: 1530 QCKCKPNVIGRRCDLCAPGYYHYPS---CRRCDCHPDGTEVSVCDPVTGQCHCKENVEGP 1586
Query: 151 RCELCQPNHYGFSLD-----GCKPCMC 172
RC+ C+ FSLD GC C C
Sbjct: 1587 RCDQCRLGT--FSLDASNPKGCTKCFC 1611
Score = 284 (105.0 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 65/173 (37%), Positives = 79/173 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY-------------FGDA--LALPKGDCEPCQCYIPGT 75
TG C C N G C+ C GY + D LP G C CY GT
Sbjct: 426 TGRCY-CKPNYTGEHCNACAEGYLDFPHCYPVPAFAYNDTGEQVLPAGQIINCDCYAGGT 484
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
E D G C CKP+ GT+CDQC GHY G C+ C C G + TCD
Sbjct: 485 -EGNACRK--DPRVGMCVCKPNFQGTHCDQCTPGHY----GPLCQPCQCSGPGQYDGTCD 537
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TGQCLCR G G C+ C P ++ + L C+ C C +G+ CD SG+C
Sbjct: 538 SETGQCLCRTGFEGQLCDRCAPGYFNYPL--CQLCGCSAVGTLPGGCDSSGRC 588
Score = 278 (102.9 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 59/156 (37%), Positives = 77/156 (49%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C N G +C C GY+G P +C PC C GT +CD++TGQC C P
Sbjct: 1440 CKSNVIGRECSRCATGYWG----FP--NCRPCDC---GTR-------LCDEVTGQCICPP 1483
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT---CDPITGQCLCRPGVTGTRCE 153
H + C CE + GC+ C+C G T CD +GQC C+P V G RC+
Sbjct: 1484 HTLKPECVVCEPQTFGCHPLIGCEDCNCSQPGVQELTELGCDVDSGQCKCKPNVIGRRCD 1543
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
LC P +Y + C+ C C P G+ CDP +GQC
Sbjct: 1544 LCAPGYYHYP--SCRRCDCHPDGTEVSVCDPVTGQC 1577
Score = 255 (94.8 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 60/165 (36%), Positives = 80/165 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C N G C+ C G++G P C PCQC G+L + C+Q TGQ
Sbjct: 631 GQC-RCHVNFTGHTCNQCALGFYG----YPS--CTPCQCSREGSLHS-----TCNQETGQ 678
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP--ITGQCLCRPGVTG 149
CSC+P V G CD C G Y C+ C+P G + T DP G C CR V G
Sbjct: 679 CSCRPKVTGLRCDSCVPGAYGF---PHCEVGSCNPAGLV--TADPSLAPGSCACRAYVEG 733
Query: 150 TRCELCQPNHYGFSLD---GCKPCMCDPIGSNS--LQCDP-SGQC 188
C+ C+P ++ + D GC C C+ G+ S +C +GQC
Sbjct: 734 PACDRCKPLYWNLTPDNPYGCTSCKCETKGTISGIAECQQGNGQC 778
Score = 251 (93.4 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 61/167 (36%), Positives = 78/167 (46%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
++G C C GP+C+ C G+ + P C C C G ++ C
Sbjct: 584 SSGRCF-CKAEFAGPRCEQCSSGHH----SYPH--CYACSCDSRGAVDNN-----CSP-A 630
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C + G C+QC +G Y S C C C GSL+ TC+ TGQC CRP VTG
Sbjct: 631 GQCRCHVNFTGHTCNQCALGFYGYPS---CTPCQCSREGSLHSTCNQETGQCSCRPKVTG 687
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRA 196
RC+ C P YGF C+ C+P G + DPS PG RA
Sbjct: 688 LRCDSCVPGAYGFP--HCEVGSCNPAGL--VTADPS-LAPGSCACRA 729
Score = 250 (93.1 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 58/179 (32%), Positives = 83/179 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQLTG 90
G C+ C ++T G C+ C+PGY+ P + P CY +++ C+ LTG
Sbjct: 373 GVCIDCQHHTTGVNCERCIPGYYRS----PDHPIDSPYICY-RCNCKSDFTDGTCEDLTG 427
Query: 91 QCSCKPHVVGTNCDQCEVGH-------------YN-----IISGEGCKSCDCDPVGSLNR 132
+C CKP+ G +C+ C G+ YN ++ +CDC G+
Sbjct: 428 RCYCKPNYTGEHCNACAEGYLDFPHCYPVPAFAYNDTGEQVLPAGQIINCDCYAGGTEGN 487
Query: 133 TC--DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C DP G C+C+P GT C+ C P HYG L C+PC C G CD +GQC
Sbjct: 488 ACRKDPRVGMCVCKPNFQGTHCDQCTPGHYG-PL--CQPCQCSGPGQYDGTCDSETGQC 543
Score = 235 (87.8 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 50/141 (35%), Positives = 70/141 (49%)
Query: 66 EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCD 125
+PCQC+ G ++ C+ GQC CK +V+G C +C G++ C+ CDC
Sbjct: 1417 QPCQCHEAGARGSQ-----CEPFGGQCPCKSNVIGRECSRCATGYWGF---PNCRPCDC- 1467
Query: 126 PVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ--- 181
G+ R CD +TGQC+C P C +C+P +G L GC+ C C G L
Sbjct: 1468 --GT--RLCDEVTGQCICPPHTLKPECVVCEPQTFGCHPLIGCEDCNCSQPGVQELTELG 1523
Query: 182 CD-PSGQC---PGVFMNRAEM 198
CD SGQC P V R ++
Sbjct: 1524 CDVDSGQCKCKPNVIGRRCDL 1544
Score = 226 (84.6 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 52/167 (31%), Positives = 78/167 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE-TFTPVCDQLT 89
TG C C G +CD+C+PG +G P CE C G + + + P
Sbjct: 676 TGQC-SCRPKVTGLRCDSCVPGAYG----FPH--CEVGSCNPAGLVTADPSLAP------ 722
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLN--RTCDPITGQCLCRP 145
G C+C+ +V G CD+C+ ++N+ GC SC C+ G+++ C GQC C+P
Sbjct: 723 GSCACRAYVEGPACDRCKPLYWNLTPDNPYGCTSCKCETKGTISGIAECQQGNGQCFCKP 782
Query: 146 GVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G C C+ ++ + GC+ C CD GS C+ SG C
Sbjct: 783 NTCGQFCSACKDGYFSMENTNYFGCQGCRCDVGGSLGPSCEERSGAC 829
Score = 225 (84.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 48/129 (37%), Positives = 63/129 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C G CD C GY+G C C C + G + + C TG
Sbjct: 2015 TGQCF-CKAGVTGQHCDHCEEGYYGFEGC---SGCRRCDCDV-GAMGSS-----CHAQTG 2064
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P V G+ C QC G++ S GC+ C+C GS CDP TG+C C G+TG
Sbjct: 2065 QCHCLPGVSGSRCQQCAPGYWGF-SERGCRKCECRG-GS----CDPRTGECTCSNGLTGK 2118
Query: 151 RCELCQPNH 159
+C++C N+
Sbjct: 2119 QCDVCMHNY 2127
Score = 218 (81.8 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 62/205 (30%), Positives = 88/205 (42%)
Query: 8 VSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP 67
VS+ ++L + +D V + + C N G C C PGY+ D L G C P
Sbjct: 1783 VSLRRVVLEIA--TDTATGVPASNVELCFCPANYLGDSCQECAPGYYRDTKGLFLGKCIP 1840
Query: 68 CQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEG---CKSCD 123
C C + C +G C +C+ + G +C+QC+ G+ + +G C C
Sbjct: 1841 CHC--------NGHSDQCLPGSGICLNCQHNTEGDHCEQCKDGYVGSRNADGSLQCVGCP 1892
Query: 124 CD-PVGSLNRTCDPI----TGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDP- 174
C V S N + + QCLC+PG G CE C P +YG L C+PC C
Sbjct: 1893 CPLSVASNNFAIGCVHKGSSTQCLCKPGYAGPNCERCAPGYYGNPLVIGSSCQPCDCSGN 1952
Query: 175 IGSNSL--QCDP-SGQCPGVFMNRA 196
N L CD +G C G + A
Sbjct: 1953 TDPNMLFSSCDSLTGTCMGCMHHTA 1977
Score = 216 (81.1 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 46/131 (35%), Positives = 61/131 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C GP CD C P Y+ P G C C+C GT+ C Q GQ
Sbjct: 723 GSCA-CRAYVEGPACDRCKPLYWNLTPDNPYG-CTSCKCETKGTISG---IAECQQGNGQ 777
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CKP+ G C C+ G++++ + GC+ C CD GSL +C+ +G C CR G
Sbjct: 778 CFCKPNTCGQFCSACKDGYFSMENTNYFGCQGCRCDVGGSLGPSCEERSGACRCRQNTRG 837
Query: 150 TRCELCQPNHY 160
C +HY
Sbjct: 838 PTCTQPVRDHY 848
Score = 209 (78.6 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 46/129 (35%), Positives = 62/129 (48%)
Query: 65 CEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC 124
C PCQC G+L + C+Q TGQCSC+P V G CD C G Y C+ C
Sbjct: 657 CTPCQCSREGSLHS-----TCNQETGQCSCRPKVTGLRCDSCVPGAYGF---PHCEVGSC 708
Query: 125 DPVGSLNRTCDP--ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQC 182
+P G + T DP G C CR V G C+ C+P ++ + D +P G S +C
Sbjct: 709 NPAGLV--TADPSLAPGSCACRAYVEGPACDRCKPLYWNLTPD-------NPYGCTSCKC 759
Query: 183 DPSGQCPGV 191
+ G G+
Sbjct: 760 ETKGTISGI 768
Score = 186 (70.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 42/104 (40%), Positives = 55/104 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C KC N G +CD C PGY+ P C C C+ GT E VCD +TG
Sbjct: 1528 SGQC-KCKPNVIGRRCDLCAPGYYH----YPS--CRRCDCHPDGT-EVS----VCDPVTG 1575
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNR 132
QC CK +V G CDQC +G +++ + +GC C C G+ NR
Sbjct: 1576 QCHCKENVEGPRCDQCRLGTFSLDASNPKGCTKCFC--FGATNR 1617
Score = 149 (57.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 42/147 (28%), Positives = 58/147 (39%)
Query: 57 ALALPKGDCEPCQC--------YIPGTLETETFTPVCDQLTGQ--C-SCKPHVVGTNCDQ 105
A A +C+PC C Y P + D+ G C C+ H G NC++
Sbjct: 330 ATADSANECQPCNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCER 389
Query: 106 CEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
C G+Y I S C C+C + TC+ +TG+C C+P TG C C +
Sbjct: 390 CIPGYYRSPDHPIDSPYICYRCNCKS-DFTDGTCEDLTGRCYCKPNYTGEHCNACAEGYL 448
Query: 161 GFSLDGCKPCMCDPIGSNSLQCDPSGQ 187
F C P Q P+GQ
Sbjct: 449 DFP--HCYPVPAFAYNDTGEQVLPAGQ 473
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/106 (33%), Positives = 44/106 (41%)
Query: 90 GQCSCKPHVVGTNCDQCEV--GHY----NIISGEGCKSC--------DCDPVGSLNRTCD 135
G C+ H G QCE G N+I G C C +C P R CD
Sbjct: 1415 GAQPCQCHEAGARGSQCEPFGGQCPCKSNVI-GRECSRCATGYWGFPNCRPCDCGTRLCD 1473
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSL 180
+TGQC+C P C +C+P +G L GC+ C C G L
Sbjct: 1474 EVTGQCICPPHTLKPECVVCEPQTFGCHPLIGCEDCNCSQPGVQEL 1519
Score = 135 (52.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM 171
++ G + C C G+ C+P GQC C+ V G C C ++GF C+PC
Sbjct: 1409 SLFYNNGAQPCQCHEAGARGSQCEPFGGQCPCKSNVIGRECSRCATGYWGFP--NCRPCD 1466
Query: 172 CDPIGSNSLQCDP-SGQC 188
C G+ CD +GQC
Sbjct: 1467 C---GTRL--CDEVTGQC 1479
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 44/153 (28%), Positives = 62/153 (40%)
Query: 37 CIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQC--------YIPGTLETETFTPV 84
C +NT G CD C PG+ + A A +C+PC C Y P +
Sbjct: 306 CQHNTCGGSCDRCCPGFNQFPWKPATADSANECQPCNCNGHAYDCYYDPEVDRHKASKSR 365
Query: 85 CDQLTGQ--C-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP-ITGQ 140
D+ G C C+ H G NC++C G+Y +S D P+ S P I +
Sbjct: 366 EDKFEGGGVCIDCQHHTTGVNCERCIPGYY--------RSPD-HPIDS------PYICYR 410
Query: 141 CLCRPGVTGTRCE------LCQPNHYGFSLDGC 167
C C+ T CE C+PN+ G + C
Sbjct: 411 CNCKSDFTDGTCEDLTGRCYCKPNYTGEHCNAC 443
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 382 (139.5 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 68/159 (42%), Positives = 93/159 (58%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G QCD C P YF C+ C C I G++E CDQ TG
Sbjct: 1004 SGQC-NCKQGVFGKQCDQCRPSYFN----FTDAGCQFCHCNIYGSIEDGK----CDQTTG 1054
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C+ +V GT C++C G++NI SG+GC+ C CDP GS + +C+ +TGQC+C+PGVTG
Sbjct: 1055 KCECRENVEGTMCEKCADGYFNITSGDGCEDCGCDPTGSEDVSCNLVTGQCVCKPGVTGL 1114
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C PN YG + +GC C +P + CDP G C
Sbjct: 1115 KCDSCLPNFYGLTSEGCTEC--EPCPAPGQVCDPIDGSC 1151
Score = 339 (124.4 bits), Expect = 7.0e-29, P = 7.0e-29
Identities = 59/160 (36%), Positives = 95/160 (59%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CLKCI +T G C++C ++G+A C+PC C+ G + P C + G
Sbjct: 907 TGKCLKCIGHTTGDSCESCKEHHWGNAQL---HTCKPCGCHTQGAVN-----PQCSEENG 958
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C CK + +G CD+C+ H ++ +G C +CDC+ GS+ CD ++GQC C+ GV G
Sbjct: 959 ECECKENYIGAQCDRCKENHGDVENG--CPACDCNDTGSIGSDCDQVSGQCNCKQGVFGK 1016
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGS-NSLQCDPS-GQC 188
+C+ C+P+++ F+ GC+ C C+ GS +CD + G+C
Sbjct: 1017 QCDQCRPSYFNFTDAGCQFCHCNIYGSIEDGKCDQTTGKC 1056
Score = 300 (110.7 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 60/160 (37%), Positives = 82/160 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG--DCEPCQCYIPGTLETETFTPVCDQL 88
TG C+ C G +CD+CLP ++G +G +CEPC PG VCD +
Sbjct: 1102 TGQCV-CKPGVTGLKCDSCLPNFYG---LTSEGCTECEPCPA--PGQ--------VCDPI 1147
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G C C P+ VG C+ C ++ GCK CDC +GS C+ TGQC C+
Sbjct: 1148 DGSCVCPPNTVGEMCENCTTNAWDYHPLNGCKLCDCSDIGSDGGMCNTFTGQCKCKAAYV 1207
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
G +C+LC H F+ C+PC C+ G++ LQC GQC
Sbjct: 1208 GLKCDLC--THGFFNFPTCEPCGCNAAGTDPLQCK-DGQC 1244
Score = 287 (106.1 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 48/105 (45%), Positives = 69/105 (65%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CDQ TG+C C+ +V GT C++C G++NI SG+GC+ C CDP GS + +C+ +TGQC+C+
Sbjct: 1049 CDQTTGKCECRENVEGTMCEKCADGYFNITSGDGCEDCGCDPTGSEDVSCNLVTGQCVCK 1108
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
PGVTG +C+ C PN YG + +GC +C+P CP
Sbjct: 1109 PGVTGLKCDSCLPNFYGLTSEGCT------------ECEP---CP 1138
Score = 280 (103.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 61/147 (41%), Positives = 73/147 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC---DQ 87
T C C +NT G C+ CLPGY GDA C C C P L +F+ C D
Sbjct: 1553 TSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCAC--P--LVENSFSDSCVAVDH 1608
Query: 88 LTGQ-C-SCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C SCKP G C+ C G+Y G C CDC P GSL+ C+P++GQC C
Sbjct: 1609 GRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLHGACNPLSGQCEC 1668
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPC 170
+PGVTG C +CQ H F C C
Sbjct: 1669 KPGVTGRTCSMCQERH-AFINRVCTSC 1694
Score = 236 (88.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 60/177 (33%), Positives = 90/177 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGD-ALALPKGDCEPCQCYI------PGTLETETF-- 81
TG+CL C +NT G +C+ C PG+ G+ + G CE C+C P + TE
Sbjct: 787 TGECLNCRHNTTGSRCELCKPGHVGNPSRGGELGACEQCECPSLDLNPNPECISTELAVL 846
Query: 82 -TPVCDQLTGQC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDC----DPVGSLNRTC 134
+ ++ C +C G C+ C G + + ++G+ C C C DP+G N C
Sbjct: 847 GSVASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGK-CIECTCNGNIDPMGIGN--C 903
Query: 135 DPITGQCL-CRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSNSLQC-DPSGQC 188
D TG+CL C TG CE C+ +H+G + L CKPC C G+ + QC + +G+C
Sbjct: 904 DSETGKCLKCIGHTTGDSCESCKEHHWGNAQLHTCKPCGCHTQGAVNPQCSEENGEC 960
Score = 212 (79.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 49/151 (32%), Positives = 73/151 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA-LALPKGD-CEPCQCYIPGTLET----ETFTPVC 85
G CL+C +NT G C+ C GY+ + L+ + D C C+C G++ + +
Sbjct: 385 GRCLECAHNTEGFNCERCKDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQSAEN 444
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLN-RTCDPITGQCLCR 144
Q G C CKP G C++C G+ N + C+ C C+ GS+N TCD + C C+
Sbjct: 445 GQKPGDCICKPGFGGRRCERCAPGYRNHPT---CEPCPCNRAGSVNFDTCDGAS--CQCK 499
Query: 145 PGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
V G C+ C+ S GC+PC C
Sbjct: 500 ANVEGIYCDRCKAGTIHLSASNPLGCQPCFC 530
Score = 197 (74.4 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 51/159 (32%), Positives = 70/159 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C+ C NT G C+ C + P C+ C C G+ +C+ TGQ
Sbjct: 1149 GSCV-CPPNTVGEMCENCTTNAWDYH---PLNGCKLCDCSDIGS-----DGGMCNTFTGQ 1199
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTC--DPITGQCLCRPGV 147
C CK VG CD C G +N + E GC + DP+ + C + I G+C C+ V
Sbjct: 1200 CKCKAAYVGLKCDLCTHGFFNFPTCEPCGCNAAGTDPLQCKDGQCLCNEI-GECPCKKNV 1258
Query: 148 TGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCD 183
GT+C+ C + +L GC C C SN Q D
Sbjct: 1259 HGTKCDQCGEGTFSLDSSNLKGCTECFCFNRTSNCEQSD 1297
Score = 191 (72.3 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 37/101 (36%), Positives = 54/101 (53%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNI---ISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGV 147
C C + G +C+ C G+ + + G C+ CDC G+ + CDP TG+CL CR
Sbjct: 741 CECPENFAGNSCESCVPGYRRVNNQLYGGRCEKCDCH--GN-SEECDPFTGECLNCRHNT 797
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TG+RCELC+P H G G + C+ SL +P+ +C
Sbjct: 798 TGSRCELCKPGHVGNPSRGGELGACEQCECPSLDLNPNPEC 838
Score = 190 (71.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 46/130 (35%), Positives = 67/130 (51%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIISG------EGCKSCDCDPVGSLNRTC---DPIT- 138
G+C C + G NC++C+ G+Y SG + C++C+CDPVGS++ C D
Sbjct: 385 GRCLECAHNTEGFNCERCKDGYYRP-SGLSHYREDACRTCECDPVGSVSDACVRDDQSAE 443
Query: 139 -----GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS-NSLQCD-PSGQCP-- 189
G C+C+PG G RCE C P + C+PC C+ GS N CD S QC
Sbjct: 444 NGQKPGDCICKPGFGGRRCERCAPGYRNHPT--CEPCPCNRAGSVNFDTCDGASCQCKAN 501
Query: 190 --GVFMNRAE 197
G++ +R +
Sbjct: 502 VEGIYCDRCK 511
Score = 175 (66.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 35/90 (38%), Positives = 44/90 (48%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C G C+TC+ GY+GD + G C PC C+ G+L C+ L+GQC
Sbjct: 1614 CNSCKPGYTGQYCETCVAGYYGDPQHIG-GTCSPCDCHPDGSLHG-----ACNPLSGQCE 1667
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCD 123
CKP V G C C+ H I C SCD
Sbjct: 1668 CKPGVTGRTCSMCQERHAFI--NRVCTSCD 1695
Score = 172 (65.6 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 61/185 (32%), Positives = 79/185 (42%)
Query: 34 CLKCIYNTGGPQCDTCLPGYF----------GDALALPKGDCEPCQCYIPGTLETETFTP 83
CL C G C GY+ D +AL G EPC C+ G +T
Sbjct: 1497 CLGCPQGYTGLSCQNPEVGYYRKKHREYLNQADDIALI-GWSEPCSCH--GHSQT----- 1548
Query: 84 VCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIISGEG---CKSCDCDPV-GSLNRTCDPIT 138
C+ T C+ C+ + G C+ C G+ G C C C V S + +C +
Sbjct: 1549 -CNPDTSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCACPLVENSFSDSCVAVD 1607
Query: 139 -GQ---C-LCRPGVTGTRCELCQPNHYGFS--LDG-CKPCMCDPIGSNSLQCDP-SGQC- 188
G+ C C+PG TG CE C +YG + G C PC C P GS C+P SGQC
Sbjct: 1608 HGRGYVCNSCKPGYTGQYCETCVAGYYGDPQHIGGTCSPCDCHPDGSLHGACNPLSGQCE 1667
Query: 189 --PGV 191
PGV
Sbjct: 1668 CKPGV 1672
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 38/98 (38%), Positives = 52/98 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT--LETETFTPVCDQL 88
TG C KC G +CD C G+F P CEPC C GT L+ + +C+++
Sbjct: 1197 TGQC-KCKAAYVGLKCDLCTHGFFN----FPT--CEPCGCNAAGTDPLQCKDGQCLCNEI 1249
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDC 124
G+C CK +V GT CDQC G +++ S +GC C C
Sbjct: 1250 -GECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTECFC 1286
Score = 162 (62.1 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 52/180 (28%), Positives = 79/180 (43%)
Query: 24 LKSVAGTTGDCL-------KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL 76
LK++A T D L +C N G C++C+PGY L G CE C C+ G
Sbjct: 723 LKALAYHTQDTLMGGVEVCECPENFAGNSCESCVPGYRRVNNQLYGGRCEKCDCH--GNS 780
Query: 77 ETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIIS--GE--GCKSCDCDPVGSLN 131
E CD TG+C +C+ + G+ C+ C+ GH S GE C+ C+C P LN
Sbjct: 781 EE------CDPFTGECLNCRHNTTGSRCELCKPGHVGNPSRGGELGACEQCEC-PSLDLN 833
Query: 132 RTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMC----DPIGSNSLQCDPSG 186
+ I+ + V +C G+ + C+ C DP+ ++C +G
Sbjct: 834 PNPECISTELAVLGSVASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGKCIECTCNG 893
Score = 67 (28.6 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
G +C N G CD C G + + P G C+PC C+
Sbjct: 493 GASCQCKANVEGIYCDRCKAGTIHLSASNPLG-CQPCFCF 531
Score = 44 (20.5 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 40 NTGGPQCDTC 49
NT PQCD C
Sbjct: 89 NTQSPQCDIC 98
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 381 (139.2 bits), Expect = 2.4e-33, P = 2.4e-33
Identities = 68/159 (42%), Positives = 92/159 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C T G C+ C GYFGDAL +C+PC+C++ G++ + +CD TG
Sbjct: 846 SGACLICKSGTTGQYCERCADGYFGDAL--DARNCQPCRCHVNGSI-----SEICDSQTG 898
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CK +V+G CD C+ + + S GC C+C+ GS + CD GQC C+PGVTG
Sbjct: 899 QCECKANVIGRQCDTCKPETFGLQSSRGCVPCNCNSFGSKSFDCDG-NGQCYCQPGVTGK 957
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C Y F GC PC C G+N CDP SG+C
Sbjct: 958 KCDRCAHGFYNFEEGGCTPCACSQFGNN---CDPVSGRC 993
Score = 328 (120.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 70/171 (40%), Positives = 94/171 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ-CYIPGTLETETFTPVC--DQ 87
TG+CL C +NTGG CD CLPG++GD KG E CQ C P + + F+P C DQ
Sbjct: 733 TGECLDCKHNTGGSYCDRCLPGFYGDPT---KGTAEDCQLCACPLNIPSNNFSPTCHFDQ 789
Query: 88 LTGQ-CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPV--GSLNRTCDPITGQC 141
G C C VG C++C G++ +I G C+ C C+ S+ +CD ++G C
Sbjct: 790 SHGLICDECPVGYVGPRCERCAEGYFGQPLIPGGSCQPCQCNNNLDFSIPGSCDSLSGAC 849
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCDP-SGQC 188
L C+ G TG CE C ++G +LD C+PC C GS S CD +GQC
Sbjct: 850 LICKSGTTGQYCERCADGYFGDALDARNCQPCRCHVNGSISEICDSQTGQC 900
Score = 265 (98.3 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 53/150 (35%), Positives = 78/150 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
T C C +NT G C+ C G++G P+ DC+PC C P ++ + F+P C + G
Sbjct: 1398 TSVCQNCQHNTAGQHCERCALGFYGIIQGSPE-DCQPCAC--PLSISSNNFSPSC-VVEG 1453
Query: 91 ----QCS-CKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ C P G C++C G+ G C+ C+CD GS+ CDP TG C C
Sbjct: 1454 PSDYRCTACPPGYEGQYCERCSPGYTGNPQTPGGSCQECECDQYGSMPVPCDPATGVCTC 1513
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCD 173
+PG TG +C C+ + ++ DG K CD
Sbjct: 1514 KPGFTGWKCAGCE---HRYARDGMKCISCD 1540
Score = 261 (96.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 51/158 (32%), Positives = 74/158 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C G +CD C G++ +G C PC C F CD ++G+
Sbjct: 946 GQCY-CQPGVTGKKCDRCAHGFYN----FEEGGCTPCAC--------SQFGNNCDPVSGR 992
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C P+ +G CD+C H+ GCK CDC +G+L+ CD TG C CRP +G +
Sbjct: 993 CICPPNTIGEMCDKCAPNHWGHDIVHGCKPCDCSLIGALSAQCDLNTGCCFCRPEFSGDK 1052
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C C+ ++ + C C C G++ C+ G C
Sbjct: 1053 CTECRSGYWNYPQ--CIACQCVLSGTDPRSCETDLGTC 1088
Score = 230 (86.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 52/154 (33%), Positives = 75/154 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C NT G CD C P ++G + G C+PC C + G L + CD TG
Sbjct: 990 SGRCI-CPPNTIGEMCDKCAPNHWGHDIV--HG-CKPCDCSLIGALSAQ-----CDLNTG 1040
Query: 91 QCSCKPHVVGTNCDQCEVGHYN---------IISGEGCKSCDCDPVGSLNRTCDPITGQC 141
C C+P G C +C G++N ++SG +SC+ D +G+ + C TGQC
Sbjct: 1041 CCFCRPEFSGDKCTECRSGYWNYPQCIACQCVLSGTDPRSCETD-LGTCS--CVNHTGQC 1097
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G C+ C+ +G S GC C C
Sbjct: 1098 SCKVNVEGVHCDRCKSGTFGLSARNPLGCSSCYC 1131
Score = 228 (85.3 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 50/150 (33%), Positives = 69/150 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTL-ET---ETFTPVC 85
G C+ C +T G C+TC+ GYF LP C+PC C G+L ET +
Sbjct: 338 GVCVNCTSHTDGINCETCVDGYFRPKGVLPDSPDPCQPCSCDPNGSLHETCVKDEKHAEG 397
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
D L G C CK G +C +C +G+ C C+C GS N DP G C+C+
Sbjct: 398 DMLPGFCHCKTGYAGEHCSRCALGYTGY---PDCLPCNCSVEGSAN--IDPCVGLCVCKE 452
Query: 146 GVTGTRCELCQPNHYGFSLD---GCKPCMC 172
V G C+ C+ + + GC+ C C
Sbjct: 453 HVEGENCDRCKSGFFNLQQNNPKGCEECFC 482
Score = 209 (78.6 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 56/173 (32%), Positives = 78/173 (45%)
Query: 37 CIYNTGGPQCDTCLPGYF----GDALALPK---GDCEPCQCYIPGTLETETFTPVCDQLT 89
C G C++C PG++ +P G C CQC+ T+ CD T
Sbjct: 1347 CPLGYSGLSCESCSPGFYRLPASHGGRIPSQSLGACVVCQCHGHSTM--------CDPKT 1398
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCD-PVGSLN--RTC---DPITGQ 140
C +C+ + G +C++C +G Y II G E C+ C C + S N +C P +
Sbjct: 1399 SVCQNCQHNTAGQHCERCALGFYGIIQGSPEDCQPCACPLSISSNNFSPSCVVEGPSDYR 1458
Query: 141 CL-CRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSLQCDPS-GQC 188
C C PG G CE C P + G G C+ C CD GS + CDP+ G C
Sbjct: 1459 CTACPPGYEGQYCERCSPGYTGNPQTPGGSCQECECDQYGSMPVPCDPATGVC 1511
Score = 181 (68.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 55/169 (32%), Positives = 74/169 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCK 95
C G C+ C P + + G C PC C+ G E+ CD +TG+C CK
Sbjct: 689 CPPGYAGTSCEYCWPQHRRVNGTIFGGVCTPCTCF--GHAES------CDDITGECLDCK 740
Query: 96 PHVVGTNCDQCEVGHY-NIISG--EGCKSCDCD---PVGSLNRTC--DPITGQ-C-LCRP 145
+ G+ CD+C G Y + G E C+ C C P + + TC D G C C
Sbjct: 741 HNTGGSYCDRCLPGFYGDPTKGTAEDCQLCACPLNIPSNNFSPTCHFDQSHGLICDECPV 800
Query: 146 GVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSL--QCDP-SGQC 188
G G RCE C ++G L C+PC C+ S+ CD SG C
Sbjct: 801 GYVGPRCERCAEGYFGQPLIPGGSCQPCQCNNNLDFSIPGSCDSLSGAC 849
Score = 163 (62.4 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 46/124 (37%), Positives = 58/124 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT----LETETFTPVCD 86
TG C C G +C C GY+ P+ C CQC + GT ET+ T C
Sbjct: 1039 TGCCF-CRPEFSGDKCTECRSGYWN----YPQ--CIACQCVLSGTDPRSCETDLGTCSCV 1091
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR 144
TGQCSCK +V G +CD+C+ G + + + GC SC C G L C G L R
Sbjct: 1092 NHTGQCSCKVNVEGVHCDRCKSGTFGLSARNPLGCSSCYC--FG-LTTQCSEARG--LIR 1146
Query: 145 PGVT 148
VT
Sbjct: 1147 TWVT 1150
Score = 163 (62.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/117 (35%), Positives = 52/117 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTGQC 92
C C G C+ C PGY G+ P G C+ C+C G++ PV CD TG C
Sbjct: 1459 CTACPPGYEGQYCERCSPGYTGNPQT-PGGSCQECECDQYGSM------PVPCDPATGVC 1511
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
+CKP G C CE H G C SCD + G L D + Q + +TG
Sbjct: 1512 TCKPGFTGWKCAGCE--HRYARDGMKCISCDDECTGLLLNDLDRLN-QMIMSVNLTG 1565
Score = 162 (62.1 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 44/132 (33%), Positives = 56/132 (42%)
Query: 42 GGPQCDTCLPGYFG---DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHV 98
G QC C PG G D A + E C P F CD ++G+C C P+
Sbjct: 944 GNGQC-YCQPGVTGKKCDRCAHGFYNFEEGGC-TP--CACSQFGNNCDPVSGRCICPPNT 999
Query: 99 VGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPN 158
+G CD+C H+ GCK CDC +G+L+ CD TG C CRP +G
Sbjct: 1000 IGEMCDKCAPNHWGHDIVHGCKPCDCSLIGALSAQCDLNTGCCFCRPEFSG--------- 1050
Query: 159 HYGFSLDGCKPC 170
D C C
Sbjct: 1051 ------DKCTEC 1056
Score = 160 (61.4 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 39/115 (33%), Positives = 54/115 (46%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN---II--SGEGCKSCDCDPVGSLNRTC--------- 134
G C +C H G NC+ C G++ ++ S + C+ C CDP GSL+ TC
Sbjct: 338 GVCVNCTSHTDGINCETCVDGYFRPKGVLPDSPDPCQPCSCDPNGSLHETCVKDEKHAEG 397
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
D + G C C+ G G C C + G+ C PC C GS ++ DP G C
Sbjct: 398 DMLPGFCHCKTGYAGEHCSRCALGYTGYP--DCLPCNCSVEGSANI--DPCVGLC 448
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/102 (34%), Positives = 46/102 (45%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNI---ISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGV 147
C C P GT+C+ C H + I G C C C G +CD ITG+CL C+
Sbjct: 687 CDCPPGYAGTSCEYCWPQHRRVNGTIFGGVCTPCTC--FGHAE-SCDDITGECLDCKHNT 743
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPS 185
G+ C+ C P YG G C+ C C P+ S P+
Sbjct: 744 GGSYCDRCLPGFYGDPTKGTAEDCQLCAC-PLNIPSNNFSPT 784
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/118 (30%), Positives = 48/118 (40%)
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG----------CKSCDCDPVGSLN 131
TP + L QC C G +C+ C G Y + + G C C C ++
Sbjct: 1336 TPQAN-LIEQCDCPLGYSGLSCESCSPGFYRLPASHGGRIPSQSLGACVVCQCHGHSTM- 1393
Query: 132 RTCDPITGQCL-CRPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDPS 185
CDP T C C+ G CE C YG S + C+PC C P+ +S PS
Sbjct: 1394 --CDPKTSVCQNCQHNTAGQHCERCALGFYGIIQGSPEDCQPCAC-PLSISSNNFSPS 1448
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00067
Identities = 48/183 (26%), Positives = 67/183 (36%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALAL 60
+ +SV + +C G C +C +NT G CD C PG+ + L
Sbjct: 240 IKDISVGGMCICSGHAKACPLDPVTNKSVC-QCEHNTCGETCDRCCPGFNQKPWHAGTFL 298
Query: 61 PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK 120
K CEPC C+ T E V D+ ++ G C C H + I+ E C
Sbjct: 299 VKHQCEPCNCH-GKTEECYYDQNVADRNQSLNIFGEYIGGGVCVNC-TSHTDGINCETCV 356
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRP-GVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
P G L + DP C C P G C + + G L G C G +
Sbjct: 357 DGYFRPKGVLPDSPDPCQ-PCSCDPNGSLHETCVKDEKHAEGDMLPGFCHCKTGYAGEHC 415
Query: 180 LQC 182
+C
Sbjct: 416 SRC 418
Score = 70 (29.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 22/69 (31%), Positives = 25/69 (36%)
Query: 140 QCLCRPGVTGTRCELCQPNHYGF-----------SLDGCKPCMCDPIGSNSLQCDP-SGQ 187
QC C G +G CE C P Y SL C C C +S CDP +
Sbjct: 1344 QCDCPLGYSGLSCESCSPGFYRLPASHGGRIPSQSLGACVVCQCH---GHSTMCDPKTSV 1400
Query: 188 CPGVFMNRA 196
C N A
Sbjct: 1401 CQNCQHNTA 1409
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 378 (138.1 bits), Expect = 4.9e-33, P = 4.9e-33
Identities = 72/170 (42%), Positives = 96/170 (56%)
Query: 22 DILK--SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
D+L+ S TG+CL+C+ NT GP C+ C G++GDA+ +C C+C+ G+L
Sbjct: 811 DLLEPGSCDSVTGECLRCLGNTDGPHCERCADGFYGDAVTAK--NCRACECHGQGSLSA- 867
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
VC TG C CKPHV G CDQC G+Y + +G GC C+C GSL+ C P G
Sbjct: 868 ----VCHPETGLCECKPHVTGQRCDQCLYGYYGLETGLGCLPCNCS-AGSLSDDCTP-EG 921
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CLC PGV G +C+ C Y + GC PC C N+ CDP +G+C
Sbjct: 922 HCLCVPGVAGEKCDRCARGFYSYQDGGCTPCDCAHT-QNT--CDPETGEC 968
Score = 307 (113.1 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 63/153 (41%), Positives = 82/153 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C +NT G CDTC PGY+G DC PC C P +L +++P C L G
Sbjct: 1370 TGKCLNCGHNTTGDHCDTCAPGYYGKVTG-SASDCSPCTC--PHSLPA-SYSPTCI-LEG 1424
Query: 91 ----QC-SCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+C +C G C++C G+Y + G C+ CDC P GS++ CD +GQC+C
Sbjct: 1425 DHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSPHGSVHSDCDRGSGQCIC 1484
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
RPG TG RC C+P H D C C D +G
Sbjct: 1485 RPGATGLRCGDCEPRHILVESD-CVSCDDDCVG 1516
Score = 305 (112.4 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 59/158 (37%), Positives = 80/158 (50%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G CL C+ G +CD C G++ + G C PC C T+ CD TG+
Sbjct: 921 GHCL-CVPGVAGEKCDRCARGFY----SYQDGGCTPCDC-----AHTQN---TCDPETGE 967
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C PH G C++C GH+ GC++C+C VG+ ++ CD +TG C C+P G
Sbjct: 968 CVCPPHTRGAACEECADGHWGHDLELGCQACNCSSVGAASQRCDVVTGHCRCKPAFGGRT 1027
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
CE C P + GF D C C CDP G+ + CD G C
Sbjct: 1028 CEQCSPGYKGFP-D-CMACDCDPRGTLADTCDQEQGLC 1063
Score = 278 (102.9 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 60/169 (35%), Positives = 83/169 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C +NT G C+ CLPG++G GDC+PC C P + + F+P C G
Sbjct: 710 GVCFACQHNTTGEHCERCLPGFYGLPSRGTPGDCQPCAC--PLSTASNNFSPTCHLDDGD 767
Query: 92 ---CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDP-VGSLNR-TCDPITGQCL- 142
C C P +G C++C G+Y + G+ C +C+C V L +CD +TG+CL
Sbjct: 768 EVVCDQCAPGYMGDWCERCADGYYGNPTVPGDSCVACNCSGNVDLLEPGSCDSVTGECLR 827
Query: 143 CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCDP-SGQC 188
C G CE C YG ++ C+ C C GS S C P +G C
Sbjct: 828 CLGNTDGPHCERCADGFYGDAVTAKNCRACECHGQGSLSAVCHPETGLC 876
Score = 241 (89.9 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 59/170 (34%), Positives = 77/170 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+C+ C +T G C+ C G++G L L C+ C C G CD +TG
Sbjct: 965 TGECV-CPPHTRGAACEECADGHWGHDLEL---GCQACNCSSVGAASQR-----CDVVTG 1015
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI---------TGQC 141
C CKP G C+QC G+ C +CDCDP G+L TCD TG C
Sbjct: 1016 HCRCKPAFGGRTCEQCSPGYKGF---PDCMACDCDPRGTLADTCDQEQGLCSCAQETGAC 1072
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD-----GCKPCMCDPIGSNSLQCDPSG 186
C+ V G +C C+ F+LD GC PC C G + L + G
Sbjct: 1073 SCKENVAGPQCGECRAGT--FALDKADPRGCTPCFC--FGLSQLCSEAQG 1118
Score = 197 (74.4 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 59/179 (32%), Positives = 75/179 (41%)
Query: 36 KCIY--NTGGPQCDTCLPGYFGDALALPKGD----------CEPCQCYIPGTLETETFTP 83
KC+ T G C C PGY L P+GD C PC C +
Sbjct: 1315 KCVCPPGTAGLSCQDCAPGYHRGKL--PEGDGRRPRPLLAPCVPCNC--------NNHSD 1364
Query: 84 VCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPV--GSLNRTCDPIT 138
CD TG+C +C + G +CD C G+Y ++G C C C S + TC +
Sbjct: 1365 TCDPETGKCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCTCPHSLPASYSPTCI-LE 1423
Query: 139 G----QC-LCRPGVTGTRCELCQPNHYGFS-LDG--CKPCMCDPIGSNSLQCDP-SGQC 188
G +C C G G CE C +YG + G C+ C C P GS CD SGQC
Sbjct: 1424 GDHDFRCDACFVGYEGQYCERCSSGYYGNPRMPGSTCQRCDCSPHGSVHSDCDRGSGQC 1482
Score = 184 (69.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 62/196 (31%), Positives = 88/196 (44%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+ L V P+ I S+A C +C G C++CLPGY+ L G C+PC+C+
Sbjct: 643 VSLDVASPNVIDLSLATEVEHC-ECPQGYAGISCESCLPGYYRVDGILFGGICQPCECH- 700
Query: 73 PGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIIS-GE-G-CKSCDCDPVG 128
G CD + G C +C+ + G +C++C G Y + S G G C+ C C P+
Sbjct: 701 -G------HAAECD-VHGVCFACQHNTTGEHCERCLPGFYGLPSRGTPGDCQPCAC-PLS 751
Query: 129 SLNR----TCDPITGQ---C-LCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGS 177
+ + TC G C C PG G CE C +YG D C C C G+
Sbjct: 752 TASNNFSPTCHLDDGDEVVCDQCAPGYMGDWCERCADGYYGNPTVPGDSCVACNCS--GN 809
Query: 178 NSL----QCDP-SGQC 188
L CD +G+C
Sbjct: 810 VDLLEPGSCDSVTGEC 825
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 34/97 (35%), Positives = 47/97 (48%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C G C+ C GY+G+ +P C+ C C G++ ++ CD+ +GQC
Sbjct: 1430 CDACFVGYEGQYCERCSSGYYGNP-RMPGSTCQRCDCSPHGSVHSD-----CDRGSGQCI 1483
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSL 130
C+P G C CE H I+ C SCD D VG L
Sbjct: 1484 CRPGATGLRCGDCEPRH--ILVESDCVSCDDDCVGVL 1518
Score = 155 (59.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 35/101 (34%), Positives = 50/101 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVC--DQ 87
G C+ C+ NT G C+TC+ GY+ P D C PC C G+L + D
Sbjct: 360 GVCIGCLQNTMGVNCETCVDGYYRPHGVSPYEDHPCRPCDCDPVGSLNSVCIKDDLHSDL 419
Query: 88 LTGQC--SCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDC 124
G C S +V G++CD+C+ G YN+ + +GC C C
Sbjct: 420 HRGTCFISVLENVEGSHCDRCKPGFYNLEEKNPQGCSECFC 460
Score = 154 (59.3 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 34/97 (35%), Positives = 44/97 (45%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYN--IISGEGCKS----CDCDPVGSLNR--TCDPITG 139
L +C C P G +C C G++ + G+G + C P N TCDP TG
Sbjct: 1312 LLEKCVCPPGTAGLSCQDCAPGYHRGKLPEGDGRRPRPLLAPCVPCNCNNHSDTCDPETG 1371
Query: 140 QCL-CRPGVTGTRCELCQPNHYGF---SLDGCKPCMC 172
+CL C TG C+ C P +YG S C PC C
Sbjct: 1372 KCLNCGHNTTGDHCDTCAPGYYGKVTGSASDCSPCTC 1408
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/101 (34%), Positives = 46/101 (45%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNI--IS---GEGCKSCDCDPVGSLNRTC--DPI---- 137
G C C + +G NC+ C G+Y +S C+ CDCDPVGSLN C D +
Sbjct: 360 GVCIGCLQNTMGVNCETCVDGYYRPHGVSPYEDHPCRPCDCDPVGSLNSVCIKDDLHSDL 419
Query: 138 -TGQCLCR--PGVTGTRCELCQPNHYGF---SLDGCKPCMC 172
G C V G+ C+ C+P Y + GC C C
Sbjct: 420 HRGTCFISVLENVEGSHCDRCKPGFYNLEEKNPQGCSECFC 460
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 374 (136.7 bits), Expect = 6.6e-33, P = 6.6e-33
Identities = 70/161 (43%), Positives = 89/161 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQL 88
TG CLKC+Y+T G C C GY+GDAL + DC C C GT++ CD+
Sbjct: 994 TGRCLKCLYHTEGEHCQFCRFGYYGDAL---QQDCRKCVCNYLGTVQEHCNGSDCQCDKA 1050
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TGQC C P+V+G NCD+C + + SG GC C+C+ S +C+ TGQC C PG
Sbjct: 1051 TGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQCMPGFG 1110
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C CQ +G C+ C CDP G + QCD S GQC
Sbjct: 1111 GRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQC 1151
Score = 312 (114.9 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 69/176 (39%), Positives = 95/176 (53%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFG--DALALPKGDCEPCQCYIPGTLET---ET 80
+V+G G C C +NT G C+ C P Y+ + CE C C G+ ++
Sbjct: 356 NVSG--GVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNFCERCTCDPAGSQNEGICDS 413
Query: 81 FTPVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTCD 135
+T L GQC CK +V G +CD C+ G Y++ S + GCKSC C+P+G++ CD
Sbjct: 414 YTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGGNPCD 473
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQC-DPSGQC 188
TG C C+ VTG C+ C P H+G S LDGC+PC CD G+ + C SGQC
Sbjct: 474 SETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCFAESGQC 529
Score = 287 (106.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 62/183 (33%), Positives = 92/183 (50%)
Query: 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDCE 66
+DI G ++ + A T +C+ N+ P D C F + L +
Sbjct: 713 LDIFTVGGSGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLA 772
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
C+C G+L + VCD GQC C+P+VVG C++C G + GCK C+C
Sbjct: 773 -CECDPQGSLSS-----VCDPNGGQCQCRPNVVGRTCNRCAPGTFGF-GPSGCKPCECHL 825
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GS+N C+P+TGQC C GV +C+ C P H+GF C+PC C+ ++ CDP +
Sbjct: 826 QGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFP--SCQPCQCN---GHADDCDPVT 880
Query: 186 GQC 188
G+C
Sbjct: 881 GEC 883
Score = 274 (101.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 62/171 (36%), Positives = 84/171 (49%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L SV G +C N G C+ C PG FG P G C+PC+C++
Sbjct: 771 LACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFG---PSG-CKPCECHLQ 826
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G++ C+ +TGQC C V CD+C GH+ S C+ C C+ G +
Sbjct: 827 GSVNA-----FCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS---CQPCQCN--GHAD-D 875
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSL----DGCKPCMCDPIGSNS 179
CDP+TG+CL C+ G CE C +YG + D C+PC C P G +S
Sbjct: 876 CDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPC-PDGPDS 925
Score = 269 (99.8 bits), Expect = 9.8e-22, P = 9.8e-22
Identities = 56/140 (40%), Positives = 70/140 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C+ N G CD C P + LA G C+PC C +F P C++ TG
Sbjct: 1051 TGQCL-CLPNVIGQNCDRCAPNTW--QLASGTG-CDPCNCNA-----AHSFGPSCNEFTG 1101
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P G C +C+ + E C++CDCDP G CD TGQC+C GV G
Sbjct: 1102 QCQCMPGFGGRTCSECQELFWGDPDVE-CRACDCDPRGIETPQCDQSTGQCVCVEGVEGP 1160
Query: 151 RCELCQPNHYGFSLDGCKPC 170
RC+ C + G D C PC
Sbjct: 1161 RCDKCTRGYSGVFPD-CTPC 1179
Score = 265 (98.3 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 53/135 (39%), Positives = 73/135 (54%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C N G CD C G++ + P G C+ C C GT+ P CD TG
Sbjct: 424 GQC-RCKLNVEGEHCDVCKEGFYDLSSEDPFG-CKSCACNPLGTIPGGN--P-CDSETGH 478
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK V G +CDQC H+ + + +GC+ CDCD G+LN +C +GQC CRP + G
Sbjct: 479 CYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCFAESGQCSCRPHMIGR 538
Query: 151 RCELCQPNHYGFSLD 165
+C +P +Y +LD
Sbjct: 539 QCNEVEPGYYFATLD 553
Score = 263 (97.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 60/170 (35%), Positives = 86/170 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVC--DQ 87
TG+CL C T G C+ CL GY+GD + + GD C PC C G F C D
Sbjct: 880 TGECLNCQDYTMGHNCERCLAGYYGDPI-IGSGDHCRPCPCP-DGPDSGRQFARSCYQDP 937
Query: 88 LTGQ--CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDC-DPVGSLN-RTCDPITGQC 141
+T Q C C P +G+ CD C G++ S G C+ C C + + + + CD TG+C
Sbjct: 938 VTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGRC 997
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDPSG-QC 188
L C G C+ C+ +YG +L C+ C+C+ +G+ C+ S QC
Sbjct: 998 LKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVCNYLGTVQEHCNGSDCQC 1047
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 38/81 (46%), Positives = 48/81 (59%)
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
+C+CDP GSL+ CDP GQC CRP V G C C P +GF GCKPC C GS +
Sbjct: 772 ACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCECHLQGSVNA 831
Query: 181 QCDP-SGQC---PGVFMNRAE 197
C+P +GQC GV+ + +
Sbjct: 832 FCNPVTGQCHCFQGVYARQCD 852
Score = 201 (75.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 57/195 (29%), Positives = 81/195 (41%)
Query: 19 PPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCY-- 71
P + V G G C+ C +NT G C+ C+ Y + A C+ C C
Sbjct: 282 PVDGFNEEVEGMVHGHCM-CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEH 340
Query: 72 -IPGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDC 124
I + + + G C C+ + +G NC+QC+ +Y +I C+ C C
Sbjct: 341 SISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNFCERCTC 400
Query: 125 DPVGSLNR-TCDPIT--------GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
DP GS N CD T GQC C+ V G C++C+ Y S + DP
Sbjct: 401 DPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSE-------DPF 453
Query: 176 GSNSLQCDPSGQCPG 190
G S C+P G PG
Sbjct: 454 GCKSCACNPLGTIPG 468
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 371 (135.7 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 82/209 (39%), Positives = 106/209 (50%)
Query: 4 DVHHVSVMDILLCVGPPSDILKSVAGT-TGDCLKCIYNTGGPQCDTCLPGYFGDALALPK 62
D+ H C P + SV +G C+ C N G +C C PG+ A A P
Sbjct: 367 DLTHPEACQPCEC-DPDGTVPGSVCDPLSGHCV-CKENVQGERCHLCKPGFAQLAHANPL 424
Query: 63 GDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
G C C C + GT + P CD TG CSC P+VVGT+CDQC GH+++ SG GC+ C
Sbjct: 425 G-CRRCACNVLGTRQN---VP-CDDETGSCSCLPNVVGTDCDQCAAGHWDMASGRGCRPC 479
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRC-----ELCQPNHYGFSLDGCKPCMCDPIGS 177
+C+P GS + C+ TGQC CR G TG C ++C H+G GC C CD G+
Sbjct: 480 ECNPSGSHSIHCNQFTGQCQCREGFTGRTCSAAQQQVCPDRHFGDVRVGCTECNCDFQGT 539
Query: 178 NSLQCDPS-GQC---PGVFMNRAEMSSDD 202
+ CD S G C PGV R + D
Sbjct: 540 EDVGCDKSTGHCLCRPGVTGPRCDQCQRD 568
Score = 320 (117.7 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 65/176 (36%), Positives = 92/176 (52%)
Query: 22 DILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLE 77
++ S G +G C C +NT G C+ C YF + L P+ C+PC+C GT+
Sbjct: 328 EVFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDLTHPEA-CQPCECDPDGTVP 386
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL-NRTC 134
VCD L+G C CK +V G C C+ G + GC+ C C+ +G+ N C
Sbjct: 387 GS----VCDPLSGHCVCKENVQGERCHLCKPGFAQLAHANPLGCRRCACNVLGTRQNVPC 442
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQC 188
D TG C C P V GT C+ C H+ + GC+PC C+P GS+S+ C+ +GQC
Sbjct: 443 DDETGSCSCLPNVVGTDCDQCAAGHWDMASGRGCRPCECNPSGSHSIHCNQFTGQC 498
Score = 266 (98.7 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 55/145 (37%), Positives = 73/145 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ N G CD C G++ +A +G C PC+C G+ C+Q TG
Sbjct: 446 TGSC-SCLPNVVGTDCDQCAAGHWD--MASGRG-CRPCECNPSGSHSIH-----CNQFTG 496
Query: 91 QCSCKPHVVGTNCDQ-----CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
QC C+ G C C H+ + GC C+CD G+ + CD TG CLCRP
Sbjct: 497 QCQCREGFTGRTCSAAQQQVCPDRHFGDVR-VGCTECNCDFQGTEDVGCDKSTGHCLCRP 555
Query: 146 GVTGTRCELCQPNHYGFSLDGCKPC 170
GVTG RC+ CQ +H + C+PC
Sbjct: 556 GVTGPRCDQCQRDHCS-TYPSCEPC 579
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 54/157 (34%), Positives = 71/157 (45%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C+ N G CD C G++ +A +G C PC+C G+ C+Q TGQC C+
Sbjct: 451 CLPNVVGTDCDQCAAGHWD--MASGRG-CRPCECNPSGSHSIH-----CNQFTGQCQCRE 502
Query: 97 HVVGTNCDQ-----CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
G C C H+ + GC C+CD G+ + CD TG CLCRPGVTG R
Sbjct: 503 GFTGRTCSAAQQQVCPDRHFGDVR-VGCTECNCDFQGTEDVGCDKSTGHCLCRPGVTGPR 561
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C+ CQ +H C P C+P C
Sbjct: 562 CDQCQRDH----------CSTYP------SCEPCHPC 582
Score = 214 (80.4 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 54/165 (32%), Positives = 78/165 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP--CQ-CYIPGTLETETFTPVCDQL 88
G C +C +NT GP C C Y D P D +P CQ C G + F P
Sbjct: 275 GRC-ECQHNTAGPNCGHCAALY-NDRPWAPAEDNDPHECQLCNCNGHSASCHFDPEVFHS 332
Query: 89 TGQCS------CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSL-NRTCDP 136
+G S C+ + G NC++C+ ++ ++ E C+ C+CDP G++ CDP
Sbjct: 333 SGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQRQDLTHPEACQPCECDPDGTVPGSVCDP 392
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSNSL 180
++G C+C+ V G RC LC+P GF+ L P C N L
Sbjct: 393 LSGHCVCKENVQGERCHLCKP---GFAQLAHANPLGCRRCACNVL 434
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 376 (137.4 bits), Expect = 8.2e-33, P = 8.2e-33
Identities = 69/159 (43%), Positives = 91/159 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CLKC++NT G C+ C G++GDA+ +C C C+ G+L + VC TG
Sbjct: 874 TGECLKCLWNTDGAHCERCADGFYGDAVTAK--NCRACDCHENGSL-----SGVCHLETG 926
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CKPHV G CDQC G+Y + +G GC C+C GS++ C GQC C PGV+G
Sbjct: 927 LCDCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNCSVEGSVSDNCTE-EGQCHCGPGVSGK 985
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C Y F GC PC C +N CDP SG+C
Sbjct: 986 QCDRCSHGFYAFQDGGCTPCDCAHTQNN---CDPASGEC 1021
Score = 301 (111.0 bits), Expect = 7.5e-25, P = 7.5e-25
Identities = 60/153 (39%), Positives = 82/153 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C +T G C+ C GY+G LP GDC PC C P +F+P C + G
Sbjct: 1423 TGKCLSCRDHTSGDHCELCASGYYGKVTGLP-GDCTPCTC--PHH-PPFSFSPTC-VVEG 1477
Query: 91 ----QCS-CKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ C P G C++C G++ +G C++CDC+P GS++ CD +GQC+C
Sbjct: 1478 DSDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHSDCDRASGQCVC 1537
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+PG TG CE C P H D C C D +G
Sbjct: 1538 KPGATGLHCEKCLPRHILMESD-CVSCDDDCVG 1569
Score = 271 (100.5 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 55/158 (34%), Positives = 75/158 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C G QCD C G++ A G C PC C T+ CD +G+
Sbjct: 974 GQC-HCGPGVSGKQCDRCSHGFY----AFQDGGCTPCDC-----AHTQNN---CDPASGE 1020
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C PH G C++CE ++ + +GC++C+C VGS + CD ++G C C+ G G
Sbjct: 1021 CLCPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQS 1080
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C C + F D C PC CD G+ CD G C
Sbjct: 1081 CHQCSLGYRSFP-D-CVPCGCDLRGTLPDTCDLEQGLC 1116
Score = 270 (100.1 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 59/171 (34%), Positives = 85/171 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C +NT G C+ CLPG++G GDC+PC C P ++++ F+P C G+
Sbjct: 762 GICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCAC--PLSIDSNNFSPTCHLTDGE 819
Query: 92 ---CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQC 141
C C P G+ C++C G+Y + G C C+C DP+ + + CD +TG+C
Sbjct: 820 EVVCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGH--CDSVTGEC 877
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCD-PSGQC 188
L C G CE C YG ++ C+ C C GS S C +G C
Sbjct: 878 LKCLWNTDGAHCERCADGFYGDAVTAKNCRACDCHENGSLSGVCHLETGLC 928
Score = 245 (91.3 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 54/163 (33%), Positives = 75/163 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLET-----ETFTPV 84
G C+ C NT G C+TC+ Y+ P D C PC C G+L + + +
Sbjct: 366 GVCVNCSQNTTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADL 425
Query: 85 CD-QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+ + GQC C+ G CD+C+ G+ C CDC VGSLN DP CLC
Sbjct: 426 ANGKWPGQCPCRKGYAGDKCDRCQFGYRGF---PNCIPCDCRTVGSLNE--DPCIEPCLC 480
Query: 144 RPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCD 183
+ V G C+ C+P Y + +GC C C G + + CD
Sbjct: 481 KKNVEGKNCDRCKPGFYNLKERNPEGCSECFC--FGVSGV-CD 520
Score = 223 (83.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 61/177 (34%), Positives = 80/177 (45%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKG--------DCEPCQCYIPGTLETETFTPVC 85
C+ C T G C C PGY+ + L G C PC C + VC
Sbjct: 1369 CV-CPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNC--------NNHSDVC 1419
Query: 86 DQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG-EG-CKSCDCD--PVGSLNRTCDPITG- 139
D TG+C SC+ H G +C+ C G+Y ++G G C C C P S + TC + G
Sbjct: 1420 DPETGKCLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCTCPHHPPFSFSPTC-VVEGD 1478
Query: 140 ---QC-LCRPGVTGTRCELCQPNHYGF--SLDG-CKPCMCDPIGSNSLQCD-PSGQC 188
+C C PG G CE C ++G + G C+ C C+P GS CD SGQC
Sbjct: 1479 SDFRCNACLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHSDCDRASGQC 1535
Score = 217 (81.4 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 50/154 (32%), Positives = 70/154 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G+CL C +T G +C+ C Y+G P+ C+ C C G+ + CD L+G
Sbjct: 1018 SGECL-CPPHTQGLKCEECEEAYWG---LDPEQGCQACNCSAVGSTSAQ-----CDVLSG 1068
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD---------PITGQC 141
C CK G +C QC +G+ + C C CD G+L TCD +G C
Sbjct: 1069 HCPCKKGFGGQSCHQCSLGYRSF---PDCVPCGCDLRGTLPDTCDLEQGLCSCSEDSGTC 1125
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G +C CQ + D GC PC C
Sbjct: 1126 SCKENVVGPQCSKCQAGTFALRGDNPQGCSPCFC 1159
Score = 205 (77.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 65/195 (33%), Positives = 91/195 (46%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+ L + P+ I +VA C +C G C+ CLPGY+ L G C+PC+C+
Sbjct: 695 VSLDIASPNAIDLAVAADVEHC-ECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECH- 752
Query: 73 PGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIIS-GE-G-CKSCDCD-PV 127
G CD + G CS C + G +C+QC G Y S G G C+ C C +
Sbjct: 753 -GHASE------CD-IHGICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSI 804
Query: 128 GSLN--RTCDPITGQ---C-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCMC----DP 174
S N TC G+ C C PG +G+ CE C +YG ++ G C PC C DP
Sbjct: 805 DSNNFSPTCHLTDGEEVVCDQCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDP 864
Query: 175 IGSNSLQCDP-SGQC 188
+ + CD +G+C
Sbjct: 865 LEAG--HCDSVTGEC 877
Score = 178 (67.7 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 39/116 (33%), Positives = 56/116 (48%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C+ G C+ C GY G+ A G C+ C C G++ ++ CD+ +GQC
Sbjct: 1483 CNACLPGYEGQYCERCSAGYHGNPRAAG-GSCQTCDCNPQGSVHSD-----CDRASGQCV 1536
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
CKP G +C++C H I+ C SCD D VG L D + G + +TG
Sbjct: 1537 CKPGATGLHCEKCLPRH--ILMESDCVSCDDDCVGPLLNDLDSV-GDAVLSLNLTG 1589
Score = 155 (59.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 39/108 (36%), Positives = 52/108 (48%)
Query: 93 SCKPHVVGTNCDQCEVGHY--NIIS---GEGCKSCDCDPVGSLNRTC-------DPITG- 139
+C + G NC+ C +Y + +S C+ C+CDPVGSL+ C D G
Sbjct: 370 NCSQNTTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGK 429
Query: 140 ---QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
QC CR G G +C+ CQ + GF C PC C +GS L DP
Sbjct: 430 WPGQCPCRKGYAGDKCDRCQFGYRGFP--NCIPCDCRTVGS--LNEDP 473
Score = 153 (58.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 39/115 (33%), Positives = 54/115 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL----ETETFTPVCD 86
+G C C GG C C GY + P DC PC C + GTL + E C
Sbjct: 1067 SGHC-PCKKGFGGQSCHQCSLGY----RSFP--DCVPCGCDLRGTLPDTCDLEQGLCSCS 1119
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPITG 139
+ +G CSCK +VVG C +C+ G + + +GC C C G L++ C + G
Sbjct: 1120 EDSGTCSCKENVVGPQCSKCQAGTFALRGDNPQGCSPCFC--FG-LSQLCSELEG 1171
Score = 151 (58.2 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 40/109 (36%), Positives = 52/109 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C G +CD C GY G P +C PC C G+L + P C +
Sbjct: 432 GQC-PCRKGYAGDKCDRCQFGYRG----FP--NCIPCDCRTVGSLNED---P-CIE---P 477
Query: 92 CSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRTCDPIT 138
C CK +V G NCD+C+ G YN+ + EGC C C V + CD +T
Sbjct: 478 CLCKKNVEGKNCDRCKPGFYNLKERNPEGCSECFCFGVSGV---CDSLT 523
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 373 (136.4 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 71/173 (41%), Positives = 100/173 (57%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
S TG+CLKC+++T G QC+ C+ GY+GDA C+ C C GT T+ C
Sbjct: 999 SCDAATGECLKCLHHTEGAQCEHCVDGYYGDAKLKT---CQRCVCNELGTNSTKG---AC 1052
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGS-LNRT------CDPIT 138
D+++GQC C +++G CDQC H+N+ SG GC++C CD G LN C+
Sbjct: 1053 DRVSGQCPCHDNIIGMQCDQCAENHFNLASGAGCEACGCDSNGVVLNHEGVPHLQCNIFD 1112
Query: 139 GQCLCRPGVTGTRCELCQPNHYG--FSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
GQC C+PG G +C+ C+ ++G + DGC C C+P GS SLQC + G C
Sbjct: 1113 GQCQCKPGRGGRKCDQCEDLYWGDPTTPDGCHRCECNPTGSKSLQCHRNNGTC 1165
Score = 299 (110.3 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 62/169 (36%), Positives = 87/169 (51%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQ-- 87
G C C++NT G C+ C P ++ D C PC+C G+ D
Sbjct: 369 GVCDDCMHNTQGKNCEQCKPFFYRDPRRTIDDPHVCLPCECDKAGSQNKGICEGEEDAER 428
Query: 88 --LTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT-CDPITGQCL 142
+ G+C CK +V G CD+C+ G++N+ +GC +C C+ +G+ N CD TG C
Sbjct: 429 GLVAGKCYCKTNVDGNRCDRCKNGYWNLTETNVDGCVACTCNLLGTYNNEGCDKYTGMCT 488
Query: 143 CRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCD-PSGQC 188
C+ VTG C+ C P HYG S +DGCK C CD GS C+ +GQC
Sbjct: 489 CKRLVTGENCDQCLPEHYGLSEHVDGCKACDCDIGGSYDNTCEITTGQC 537
Score = 279 (103.3 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 56/130 (43%), Positives = 68/130 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C N G +CD C GY+ G C C C + GT E CD+ TG
Sbjct: 433 GKCY-CKTNVDGNRCDRCKNGYWNLTETNVDG-CVACTCNLLGTYNNEG----CDKYTGM 486
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C+CK V G NCDQC HY + +GCK+CDCD GS + TC+ TGQC CR G +G
Sbjct: 487 CTCKRLVTGENCDQCLPEHYGLSEHVDGCKACDCDIGGSYDNTCEITTGQCKCREGFSGR 546
Query: 151 RCELCQPNHY 160
RCE + Y
Sbjct: 547 RCETADSSFY 556
Score = 274 (101.5 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 53/123 (43%), Positives = 69/123 (56%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
C C G++ + +C+ GQC CKP+VVG CDQC +G Y GCK CDCD V
Sbjct: 779 CNCDATGSV-----SGICNVQGGQCECKPNVVGRRCDQCAIGTYGF-GPSGCKKCDCDAV 832
Query: 128 GSLNRTCDPITGQCLCRP-GVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS- 185
GSL CD +GQC+CR G+ G +C CQP +GF C+ C C+ ++ CD S
Sbjct: 833 GSLGNDCDKQSGQCVCREKGIYGRQCNQCQPGFWGFP--ECRTCQCN---DHANICDQSS 887
Query: 186 GQC 188
G C
Sbjct: 888 GAC 890
Score = 241 (89.9 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 62/179 (34%), Positives = 90/179 (50%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYIPGTLETETF--TPVCD 86
++G C++C T G CD C GY+GD L G C+PC C PG T + C
Sbjct: 886 SSGACIECRDLTTGHYCDRCQDGYYGDP-RLGVGIPCKPCPC--PGG-PTSGYQHADTCY 941
Query: 87 -QLTGQ------CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDP-VG-SLNRTCD 135
+ +G C+CK G C +C H+ G C+ CDC+ + ++ +CD
Sbjct: 942 LRNSGNNTQDIVCNCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGNIDMAMEGSCD 1001
Query: 136 PITGQCL-CRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSNSLQ--CDP-SGQCP 189
TG+CL C G +CE C +YG + L C+ C+C+ +G+NS + CD SGQCP
Sbjct: 1002 AATGECLKCLHHTEGAQCEHCVDGYYGDAKLKTCQRCVCNELGTNSTKGACDRVSGQCP 1060
Score = 221 (82.9 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 51/143 (35%), Positives = 65/143 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQL 88
+G C C N G QCD C +F LA G CE C C G + P C+
Sbjct: 1056 SGQC-PCHDNIIGMQCDQCAENHFN--LASGAG-CEACGCDSNGVVLNHEGVPHLQCNIF 1111
Query: 89 TGQCSCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC CKP G CDQCE ++ + + +GC C+C+P GS + C G C C+ G
Sbjct: 1112 DGQCQCKPGRGGRKCDQCEDLYWGDPTTPDGCHRCECNPTGSKSLQCHRNNGTCECQAGS 1171
Query: 148 TGTRCELCQPNHYGFSLDGCKPC 170
G C C + G C PC
Sbjct: 1172 GGALCNECARGYTG-QWPYCNPC 1193
Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 53/154 (34%), Positives = 75/154 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C N G +CD C G +G P G C+ C C G+L + CD+ +GQ
Sbjct: 796 GQC-ECKPNVVGRRCDQCAIGTYGFG---PSG-CKKCDCDAVGSLGND-----CDKQSGQ 845
Query: 92 CSCKPH-VVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTG 149
C C+ + G C+QC+ G + C++C C+ ++ CD +G C+ CR TG
Sbjct: 846 CVCREKGIYGRQCNQCQPGFWGFPE---CRTCQCNDHANI---CDQSSGACIECRDLTTG 899
Query: 150 TRCELCQPNHYGFSLDG----CKPCMCDPIGSNS 179
C+ CQ +YG G CKPC C P G S
Sbjct: 900 HYCDRCQDGYYGDPRLGVGIPCKPCPC-PGGPTS 932
Score = 195 (73.7 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 51/155 (32%), Positives = 65/155 (41%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQLTGQCSC 94
C N G QCD C +F LA G CE C C G + P C+ GQC C
Sbjct: 1061 CHDNIIGMQCDQCAENHFN--LASGAG-CEACGCDSNGVVLNHEGVPHLQCNIFDGQCQC 1117
Query: 95 KPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
KP G CDQCE ++ + + +GC C+C+P GS + C G C C+ G G C
Sbjct: 1118 KPGRGGRKCDQCEDLYWGDPTTPDGCHRCECNPTGSKSLQCHRNNGTCECQAGSGGALCN 1177
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C + G C PC G+C
Sbjct: 1178 ECARGYTG-QWPYCNPC---------------GEC 1196
Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/182 (30%), Positives = 80/182 (43%)
Query: 31 TGDCL---KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
+G C+ K IY G QC+ C PG++G P +C CQC +CDQ
Sbjct: 843 SGQCVCREKGIY---GRQCNQCQPGFWG----FP--ECRTCQC--------NDHANICDQ 885
Query: 88 LTGQC-SCKPHVVGTNCDQCEVGHYN---IISGEGCKSCDCD--PVGSLNR--TCD-PIT 138
+G C C+ G CD+C+ G+Y + G CK C C P TC +
Sbjct: 886 SSGACIECRDLTTGHYCDRCQDGYYGDPRLGVGIPCKPCPCPGGPTSGYQHADTCYLRNS 945
Query: 139 GQ------CLCRPGVTGTRCELCQPNHYGF--SLDG-CKPCMCDPIGSNSLQ--CDPS-G 186
G C C+ G G RC C NH+G + G C+ C C+ +++ CD + G
Sbjct: 946 GNNTQDIVCNCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGNIDMAMEGSCDAATG 1005
Query: 187 QC 188
+C
Sbjct: 1006 EC 1007
Score = 132 (51.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 45/170 (26%), Positives = 69/170 (40%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC---- 70
P+ +++ G C +C++NT G C+ C ++ D A+ K +C C C
Sbjct: 293 PNTVMERADIVHGRC-ECMHNTEGLNCEKC-KAFYNDLPWRPAIGDEKNECRQCNCNRHA 350
Query: 71 ----YIPGTLETETFTP--VCDQLTGQCSCKPHVVGTNCDQCEVGHYN-----IISGEGC 119
+ E+ F VCD C + G NC+QC+ Y I C
Sbjct: 351 LRCHFDRAVYESSGFVSGGVCDD------CMHNTQGKNCEQCKPFFYRDPRRTIDDPHVC 404
Query: 120 KSCDCDPVGSLNR-TCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
C+CD GS N+ C+ G+ G+ +C C+ N G D CK
Sbjct: 405 LPCECDKAGSQNKGICE---GEEDAERGLVAGKC-YCKTNVDGNRCDRCK 450
Score = 46 (21.3 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 164 LDGCKPCMCDPIGSNSLQCD-PSGQC---PGVFMNRAE 197
L+ C CD GS S C+ GQC P V R +
Sbjct: 773 LNKTSECNCDATGSVSGICNVQGGQCECKPNVVGRRCD 810
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 368 (134.6 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 70/168 (41%), Positives = 93/168 (55%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
+S TG C+KC+Y+T G C+ C GY+G+AL C C C GT+E +P
Sbjct: 984 ESCDARTGACVKCLYHTEGESCNRCRLGYYGNALTQ---SCRKCVCNQMGTVEEMCPSPG 1040
Query: 85 ---CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
CD +GQC C P+VVG +CDQC +N+ SG+GC+ CDCDP S +C+ I GQC
Sbjct: 1041 NCNCDLTSGQCLCLPNVVGQHCDQCAPDTWNMASGKGCEDCDCDPNHSFGSSCNEIMGQC 1100
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C+PG G C C+ +G C C CDP G QC+ +G C
Sbjct: 1101 SCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQCNKVTGHC 1148
Score = 334 (122.6 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 70/176 (39%), Positives = 95/176 (53%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCYIPGTLETETFT 82
+V+G G C C +NT G C+ C P +F D CEPC C G+L
Sbjct: 353 NVSG--GVCDDCQHNTMGHNCEQCKP-FFHQHPEKDIRDPNICEPCNCDPVGSLNGGVCD 409
Query: 83 PVCDQ----LTGQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSL--NRTCD 135
P+ D ++GQC CKP+V G CDQC+ GHY + GC+ C C+ +G++ CD
Sbjct: 410 PMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNALGTVPGGSPCD 469
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCDP-SGQC 188
+G C C+ VTG C+ C P H+G S +DGC+PC CD G+ + C P SGQC
Sbjct: 470 TDSGNCYCKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPVSGQC 525
Score = 302 (111.4 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 36 KCIYNTGG----PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
+C+ N+ P D C F + L +G + CQC G+L T VCD GQ
Sbjct: 734 RCLENSQAVVKTPMTDICRNYIFSVSALLHQG-VKACQCDPQGSLST-----VCDPSGGQ 787
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C+P+VVG NCD+C + + +GC+ CDC P GS++ C TGQC C G G +
Sbjct: 788 CQCRPNVVGRNCDRCAPATF-LFXPQGCRPCDCSPEGSVHSYCHEATGQCECIAGAYGRQ 846
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ C P ++GF C+PC C+ ++ QCDP +GQC
Sbjct: 847 CDRCLPGYWGFP--NCRPCTCN---GHAEQCDPQTGQC 879
Score = 282 (104.3 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 57/148 (38%), Positives = 83/148 (56%)
Query: 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET 78
P +D+ S+ +G C +C N G +CD C G++G + P G C+PC C GT+
Sbjct: 410 PMTDV--SLGLISGQC-RCKPNVEGERCDQCKQGHYGLSED-PLG-CQPCTCNALGTVPG 464
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPI 137
+ P CD +G C CK V G NCDQC H+ + + +GC+ CDCD G++N C P+
Sbjct: 465 GS--P-CDTDSGNCYCKRLVTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPV 521
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLD 165
+GQC CR + G RC+ + Y +LD
Sbjct: 522 SGQCQCREHMFGRRCDQVESGFYFIALD 549
Score = 266 (98.7 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 65/178 (36%), Positives = 83/178 (46%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P L +V +G +C N G CD C P F L P+G C PC C G+
Sbjct: 769 CQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDRCAPATF---LFXPQG-CRPCDCSPEGS 824
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
+ + C + TGQC C G CD+C G++ C+ C C+ G + CD
Sbjct: 825 VHS-----YCHEATGQCECIAGAYGRQCDRCLPGYWGF---PNCRPCTCN--GHAEQ-CD 873
Query: 136 PITGQCL-CRPGVTGTRCELCQPNHYGFSL----DGCKPCMCDPIGSNSLQCDPSGQC 188
P TGQCL CR TG CE C +YG + D C+PCMC P G S + SG C
Sbjct: 874 PQTGQCLSCRDHTTGHNCERCLGGYYGDPVLGSGDHCRPCMC-PDGPGSGR-QFSGAC 929
Score = 251 (93.4 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 57/171 (33%), Positives = 83/171 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYI-PGTLETETFTPVC--- 85
TG CL C +T G C+ CL GY+GD + L GD C PC C PG+ F+ C
Sbjct: 876 TGQCLSCRDHTTGHNCERCLGGYYGDPV-LGSGDHCRPCMCPDGPGS--GRQFSGACYKS 932
Query: 86 -DQLTGQCSCKPHVVGTNCDQCEVGHY---NIISGEGCKSCDCDP-VGSLN-RTCDPITG 139
D C C G C++C G+Y + + GE C+ C C+ + ++ +CD TG
Sbjct: 933 PDSSQVFCVCNQGYKGARCEECAPGYYGNPHEVGGE-CRPCQCNSNIDMMDPESCDARTG 991
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
C+ C G C C+ +YG +L C+ C+C+ +G+ C G C
Sbjct: 992 ACVKCLYHTEGESCNRCRLGYYGNALTQSCRKCVCNQMGTVEEMCPSPGNC 1042
Score = 250 (93.1 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 52/141 (36%), Positives = 72/141 (51%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T+G CL C+ N G CD C P + +A KG CE C C P +F C+++
Sbjct: 1047 TSGQCL-CLPNVVGQHCDQCAPDTWN--MASGKG-CEDCDCD-PN----HSFGSSCNEIM 1097
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQCSCKP G C +C + + C +CDCDP G + C+ +TG C+C GV+G
Sbjct: 1098 GQCSCKPGFGGRTCRECRELFWGNPEVK-CHACDCDPRGIAEQQCNKVTGHCVCVEGVSG 1156
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C + G C+ C
Sbjct: 1157 PRCDTCARGYTG-EFPQCERC 1176
Score = 221 (82.9 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 61/191 (31%), Positives = 88/191 (46%)
Query: 25 KSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGT---L 76
++V G G C+ C +NT G C+ C Y + A C+ C C
Sbjct: 285 EAVEGMVHGHCM-CNHNTIGLNCERCQDFYHDLPWRPAEGRNTNACKKCHCNHHSHSCHF 343
Query: 77 ETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSL 130
+ + + G C C+ + +G NC+QC+ + +I C+ C+CDPVGSL
Sbjct: 344 DMAVYRASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHPEKDIRDPNICEPCNCDPVGSL 403
Query: 131 NR-TCDPIT--------GQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNS 179
N CDP+T GQC C+P V G RC+ C+ HYG S D GC+PC C+ +G+
Sbjct: 404 NGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNALGT-- 461
Query: 180 LQCDPSGQCPG 190
PG
Sbjct: 462 --------VPG 464
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 370 (135.3 bits), Expect = 3.5e-32, P = 3.5e-32
Identities = 67/159 (42%), Positives = 91/159 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CLKC++NT G C+ C G++GDA+ +C C C+ G+L + +C TG
Sbjct: 874 TGECLKCLWNTDGAHCERCADGFYGDAVTAK--NCRACNCHENGSL-----SGICHLETG 926
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CKP+V G CDQC G+Y + +G GC C+C GS++ C GQC C PGV+G
Sbjct: 927 LCDCKPYVTGQQCDQCLPGYYGLDTGLGCVPCNCSGEGSISDNCTE-EGQCHCVPGVSGK 985
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C Y F GC PC C +N CDP SG+C
Sbjct: 986 QCDQCSHGFYAFQNGGCTPCDCAHTQNN---CDPDSGEC 1021
Score = 296 (109.3 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 64/176 (36%), Positives = 89/176 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C +T G C+ C GY+G + LP GDC PC C P +F+P C L G
Sbjct: 1423 TGKCLNCRDHTAGDHCELCTAGYYGKVIGLP-GDCTPCTC--PHH-PPFSFSPTC-VLEG 1477
Query: 91 Q----C-SCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C +C P G C++C G++ +G C+ CDC+P GS++ CD +GQC+C
Sbjct: 1478 DSGFWCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDCNPQGSVHSDCDRASGQCVC 1537
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMS 199
+PG TG CE C P H C C + +G+ D G + +N A +S
Sbjct: 1538 KPGATGLHCEECLPRHILME-SHCVSCDDECVGALLNDLDSIGDAV-LSLNLAGVS 1591
Score = 281 (104.0 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 57/158 (36%), Positives = 77/158 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C+ G QCD C G++ A G C PC C T+ CD +G+
Sbjct: 974 GQC-HCVPGVSGKQCDQCSHGFY----AFQNGGCTPCDC-----AHTQNN---CDPDSGE 1020
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C PH G C+QCE + + +GC++C+C VGS + CD ++GQC C+ G G
Sbjct: 1021 CLCPPHTHGLKCEQCEEAFWGLDPEQGCQACNCSVVGSTSPQCDVLSGQCSCKEGFGGQS 1080
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C C + F D C PC CD G+ + CD G C
Sbjct: 1081 CHQCSLGYRSFP-D-CVPCDCDLRGTLADTCDLEQGLC 1116
Score = 264 (98.0 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 60/172 (34%), Positives = 85/172 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C +NT G C+ CLPG++G GDC+PC C P ++++ F+P C LT +
Sbjct: 762 GICSGCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCAC--PLSIDSNNFSPTC-HLTDR 818
Query: 92 ----CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQ 140
C C P G C++C G+Y + G C C+C DP+ + + CD +TG+
Sbjct: 819 EEVVCDQCAPGYSGAWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGH--CDSVTGE 876
Query: 141 CL-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCD-PSGQC 188
CL C G CE C YG ++ C+ C C GS S C +G C
Sbjct: 877 CLKCLWNTDGAHCERCADGFYGDAVTAKNCRACNCHENGSLSGICHLETGLC 928
Score = 255 (94.8 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 54/163 (33%), Positives = 77/163 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLET-----ETFTPV 84
G C+ C+ NT G C+TC+ Y+ P D C PC C G+L + + +
Sbjct: 366 GVCINCLQNTTGINCETCIDQYYRPHKVSPYEDQPCRPCDCDPVGSLSSVCIKDDLHADL 425
Query: 85 CD-QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+ + GQC C+ G CD+C+ G+ C CDC VGS+N DP T CLC
Sbjct: 426 ANGKWPGQCPCRKGYAGDKCDRCQFGYRGF---PNCVPCDCSTVGSVNE--DPCTEPCLC 480
Query: 144 RPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCD 183
+ V G C+ C+P Y + +GC C C G + + CD
Sbjct: 481 KKNVEGENCDRCKPGFYNLKERNPEGCSECFC--FGVSDV-CD 520
Score = 238 (88.8 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 52/154 (33%), Positives = 76/154 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G+CL C +T G +C+ C ++G P+ C+ C C + G+ +P CD L+G
Sbjct: 1018 SGECL-CPPHTHGLKCEQCEEAFWG---LDPEQGCQACNCSVVGST-----SPQCDVLSG 1068
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD---------PITGQC 141
QCSCK G +C QC +G+ + C CDCD G+L TCD +G C
Sbjct: 1069 QCSCKEGFGGQSCHQCSLGYRSF---PDCVPCDCDLRGTLADTCDLEQGLCSCTEDSGTC 1125
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G +C+ C+ + D GC PC C
Sbjct: 1126 SCKENVLGPQCDKCRAGTFALRADNPLGCSPCFC 1159
Score = 215 (80.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 60/176 (34%), Positives = 77/176 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKG--------DCEPCQCYIPGTLETETFTPVC 85
C+ C T G C C PGY L G C PC C + VC
Sbjct: 1369 CV-CPPGTAGHSCQDCAPGYHRGKLPESSGRGPRPLLAPCVPCNC--------NNHSDVC 1419
Query: 86 DQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG-EG-CKSCDCD--PVGSLNRTC--DPIT 138
D TG+C +C+ H G +C+ C G+Y + G G C C C P S + TC + +
Sbjct: 1420 DPETGKCLNCRDHTAGDHCELCTAGYYGKVIGLPGDCTPCTCPHHPPFSFSPTCVLEGDS 1479
Query: 139 G-QC-LCRPGVTGTRCELCQPNHYGF--SLDG-CKPCMCDPIGSNSLQCD-PSGQC 188
G C C PG G CE C ++G + G C+ C C+P GS CD SGQC
Sbjct: 1480 GFWCDACLPGYEGQYCERCSAGYHGNPRAAGGSCQKCDCNPQGSVHSDCDRASGQC 1535
Score = 195 (73.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 66/196 (33%), Positives = 92/196 (46%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+ L + P+ I VA C +C G C+ CLPGY+ L G C+PC+C+
Sbjct: 695 VSLDIASPNAIDLVVAADVEHC-ECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECH- 752
Query: 73 PGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIIS-GE-G-CKSCDCD-PV 127
G +E CD + G CS C + G +C+QC G Y S G G C+ C C +
Sbjct: 753 -GH-SSE-----CD-IHGICSGCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSI 804
Query: 128 GSLN--RTCDPITGQ----C-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCMC----D 173
S N TC +T + C C PG +G CE C +YG ++ G C PC C D
Sbjct: 805 DSNNFSPTCH-LTDREEVVCDQCAPGYSGAWCERCADGYYGNPTVPGGTCVPCNCSGNVD 863
Query: 174 PIGSNSLQCDP-SGQC 188
P+ + CD +G+C
Sbjct: 864 PLEAG--HCDSVTGEC 877
Score = 156 (60.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/115 (33%), Positives = 54/115 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL----ETETFTPVCD 86
+G C C GG C C GY + P DC PC C + GTL + E C
Sbjct: 1067 SGQC-SCKEGFGGQSCHQCSLGY----RSFP--DCVPCDCDLRGTLADTCDLEQGLCSCT 1119
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITG 139
+ +G CSCK +V+G CD+C G + + + GC C C G L++ C + G
Sbjct: 1120 EDSGTCSCKENVLGPQCDKCRAGTFALRADNPLGCSPCFC--FG-LSQLCSELEG 1171
Score = 153 (58.9 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 40/109 (36%), Positives = 52/109 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C G +CD C GY G P +C PC C G++ + P C T
Sbjct: 432 GQC-PCRKGYAGDKCDRCQFGYRG----FP--NCVPCDCSTVGSVNED---P-C---TEP 477
Query: 92 CSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRTCDPIT 138
C CK +V G NCD+C+ G YN+ + EGC C C V + CD +T
Sbjct: 478 CLCKKNVEGENCDRCKPGFYNLKERNPEGCSECFCFGVSDV---CDSLT 523
Score = 108 (43.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 24/58 (41%), Positives = 28/58 (48%)
Query: 141 CLCRPGVTGTRCELCQPNHY---GFSLDG-CKPCMCDPIGSNSLQCDPSGQCPGVFMN 194
C C G TGT CE C P +Y G G C+PC C +S +CD G C G N
Sbjct: 716 CECPQGYTGTSCEACLPGYYRVDGILFGGICQPCECH---GHSSECDIHGICSGCTHN 770
Score = 91 (37.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 35/148 (23%), Positives = 52/148 (35%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALAL 60
+ +SV + +C G S C +C +NT G CD C PG+ +
Sbjct: 268 IKDISVGGMCICSGHASSCPWDEEAKQLQC-QCEHNTCGESCDRCCPGFHQQPWRPGTIS 326
Query: 61 PKGDCEPCQC-------YIPGTLETETFT-PVCDQLTGQ--C-SCKPHVVGTNCDQCEVG 109
CE C C Y + E + Q +G C +C + G NC+ C
Sbjct: 327 SSNQCEECNCHNKAKDCYYDNNVAKERKSLNTAGQYSGGGVCINCLQNTTGINCETCIDQ 386
Query: 110 HYNIISGEGCKSCDCDPVGSLNRTCDPI 137
+Y + C P CDP+
Sbjct: 387 YYRPHKVSPYEDQPCRPCD-----CDPV 409
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 370 (135.3 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 77/187 (41%), Positives = 99/187 (52%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE 77
G P+ I TG C C+ +T GP+C++C PG++G+AL LP G+C C C GT E
Sbjct: 1979 GDPNMIFSDCDPLTGACRGCLRHTTGPRCESCAPGFYGNAL-LP-GNCTRCDCSPCGT-E 2035
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
T CD TG+C CK V G CD C GH+ +GC C C P C+P
Sbjct: 2036 T------CDPQTGRCLCKAGVTGQRCDHCLEGHFGFEQCQGCHPCACGPAAE-GSECNPQ 2088
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFM 193
TGQC CRPG TG +C C P ++G GC+ C C P G CDP +G+C PG+
Sbjct: 2089 TGQCHCRPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG----HCDPHTGRCTCPPGLSG 2143
Query: 194 NRAEMSS 200
R + S
Sbjct: 2144 ERCDTCS 2150
Score = 298 (110.0 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 61/169 (36%), Positives = 83/169 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G QC+ C PG+ + P C C C P + + F C G
Sbjct: 1880 SGTCVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPC--PLAVPSNNFADGCILRNG 1937
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRT---CDPITGQCL- 142
QC C+P G +C++C G + ++ G C+ CDC G N CDP+TG C
Sbjct: 1938 RTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMIFSDCDPLTGACRG 1997
Query: 143 CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
C TG RCE C P YG +L C C C P G+ + CDP +G+C
Sbjct: 1998 CLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSPCGTET--CDPQTGRC 2044
Score = 298 (110.0 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 67/176 (38%), Positives = 82/176 (46%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
LC P+ L +G C +C GP CD CLPGY G P DC C C G
Sbjct: 591 LCGCSPAGTLPQGCDESGHC-QCRPGFDGPHCDRCLPGYHG----YP--DCHACACDPRG 643
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
+L+ + C G C C+P G C +C G Y S C C C GS++ TC
Sbjct: 644 SLDQQ-----CGA-GGLCHCRPGYTGATCQECSPGFYGFPS---CIPCHCSADGSMHTTC 694
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG-SNSLQCDPSGQCP 189
DP TGQC CRP VTG RC++C P Y F C+ C P G + + P Q P
Sbjct: 695 DPTTGQCRCRPRVTGLRCDMCVPGAYNFPY--CEAGSCHPAGLAPANPALPEAQAP 748
Score = 270 (100.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 65/172 (37%), Positives = 80/172 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C T P C C P FG P CE C C PG E P CD +G
Sbjct: 1499 TGQCI-CPPRTVPPDCLVCQPQSFG---CHPLVGCEECNCSGPGVQELTD--PTCDMDSG 1552
Query: 91 Q-CS--CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C C+P+V G CD C G Y+ S C+ CDC G++ CDP TGQC C+ V
Sbjct: 1553 HLCPHRCRPNVAGRRCDTCAPGFYSYPS---CRPCDCHEAGTMASVCDPFTGQCHCKENV 1609
Query: 148 TGTRCELCQPNHYGFSLD-----GCKPCMCDPIGSNSLQCDPSGQCPGVFMN 194
G+RC+ C+ FSLD GC C C G+ +C S FM+
Sbjct: 1610 QGSRCDQCRVGT--FSLDAANPKGCTRCFC--FGATE-RCGNSNYARHEFMD 1656
Score = 257 (95.5 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 56/166 (33%), Positives = 79/166 (47%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C +C G +CD C+PG + P CE C+ G P +
Sbjct: 697 TTGQC-RCRPRVTGLRCDMCVPGAYN----FPY--CEAGSCHPAGLAPAN---PALPEAQ 746
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCD-PITGQCLCRPG 146
C+C+ HV G +CD+C+ G++ + S EGC C CDP G+L + GQC C+
Sbjct: 747 APCTCRAHVEGPSCDRCKPGYWGLSSSNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAH 806
Query: 147 VTGTRCELCQPNHYGFS-LD--GCKPCMCDPIGSNSLQCDP-SGQC 188
V G C C+ +G D GC+ C CD G+ C+P +G C
Sbjct: 807 VCGKTCAACKDGFFGLDHADYYGCRSCRCDVGGALGQGCEPKTGAC 852
Score = 256 (95.2 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 52/126 (41%), Positives = 66/126 (52%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C + GP CD C PGY+G + + P+G C C C GTL T C Q GQC CK
Sbjct: 751 CRAHVEGPSCDRCKPGYWGLSSSNPEG-CTRCSCDPRGTLGGVT---EC-QGNGQCFCKA 805
Query: 97 HVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
HV G C C+ G + + + GC+SC CD G+L + C+P TG C CRP G C
Sbjct: 806 HVCGKTCAACKDGFFGLDHADYYGCRSCRCDVGGALGQGCEPKTGACRCRPNTQGPSCSE 865
Query: 155 CQPNHY 160
+HY
Sbjct: 866 PAKDHY 871
Score = 246 (91.7 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 58/167 (34%), Positives = 82/167 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C G +CD CL G+FG +G C PC C P +E C+ TG
Sbjct: 2041 TGRCL-CKAGVTGQRCDHCLEGHFGFEQC--QG-CHPCACG-PAAEGSE-----CNPQTG 2090
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P G C +C G++ + +GC+ C C P G CDP TG+C C PG++G
Sbjct: 2091 QCHCRPGTTGPQCLECAPGYWGLPE-KGCRRCQC-PRGH----CDPHTGRCTCPPGLSGE 2144
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAE 197
RC+ C H + G +P GS+ + C+ C + ++ E
Sbjct: 2145 RCDTCSQQHQ-VPVPG-RP------GSHGIHCEVCDHCVVLLLDDLE 2183
Score = 244 (91.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 59/173 (34%), Positives = 71/173 (41%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYF-------------GDA--LALPKGDCEPCQCYIPGT 75
TG C C N G +C C GY D LP G C C GT
Sbjct: 448 TGRCY-CRPNFTGERCSACAEGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNAAGT 506
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
D G+C CKP+ G +C+ C G Y G C C C G N CD
Sbjct: 507 QGNACRK---DPRLGRCVCKPNFQGNHCELCAPGFY----GPSCHPCQCSSPGVANGLCD 559
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
P +GQC CR G G +C+ C ++ F L C+ C C P G+ CD SG C
Sbjct: 560 PESGQCTCRTGFEGDKCDHCALGYFHFPL--CQLCGCSPAGTLPQGCDESGHC 610
Score = 240 (89.5 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 55/153 (35%), Positives = 72/153 (47%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G C C GY+G P +C PC C G +CD+LTGQC C P V +
Sbjct: 1469 GRDCSRCATGYWG----FP--NCRPCDC---GAR-------LCDELTGQCICPPRTVPPD 1512
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVGS---LNRTCDPITGQ-C--LCRPGVTGTRCELCQ 156
C C+ + GC+ C+C G + TCD +G C CRP V G RC+ C
Sbjct: 1513 CLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGHLCPHRCRPNVAGRRCDTCA 1572
Query: 157 PNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
P Y + C+PC C G+ + CDP +GQC
Sbjct: 1573 PGFYSYP--SCRPCDCHEAGTMASVCDPFTGQC 1603
Score = 225 (84.3 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC C+ G + P C+ GQC C+ HV+G +C +C G++ C+ CDC
Sbjct: 1441 PCGCHEVGAVG-----PTCEPFGGQCPCRGHVIGRDCSRCATGYWGF---PNCRPCDC-- 1490
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ---C 182
G+ R CD +TGQC+C P C +CQP +G L GC+ C C G L C
Sbjct: 1491 -GA--RLCDELTGQCICPPRTVPPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTC 1547
Query: 183 D-PSGQ-CP 189
D SG CP
Sbjct: 1548 DMDSGHLCP 1556
Score = 224 (83.9 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 58/173 (33%), Positives = 75/173 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C+ C N G C C PGY+ D L G C PCQC+ G + C +G C
Sbjct: 1834 CM-CPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQCH--GHSDR------CLPGSGTCV 1884
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEG---CKSCDCD---PVGSLNRTCDPITG--QCLCR 144
C+ + G C++C G + + C SC C P + C G QCLCR
Sbjct: 1885 GCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPCPLAVPSNNFADGCILRNGRTQCLCR 1944
Query: 145 PGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQCPG 190
PG G CE C P +G L C+PC C G ++ CDP +G C G
Sbjct: 1945 PGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMIFSDCDPLTGACRG 1997
Score = 216 (81.1 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 62/192 (32%), Positives = 75/192 (39%)
Query: 18 GPPSDILKSVAGTTG--DCLKCIYNTGGP---QCDT-----CLPGYFGDALA-LPKG--- 63
GP D + + G G DC C + G QC C PGY G G
Sbjct: 618 GPHCD--RCLPGYHGYPDCHACACDPRGSLDQQCGAGGLCHCRPGYTGATCQECSPGFYG 675
Query: 64 --DCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS 121
C PC C G++ T CD TGQC C+P V G CD C G YN C++
Sbjct: 676 FPSCIPCHCSADGSMHT-----TCDPTTGQCRCRPRVTGLRCDMCVPGAYNF---PYCEA 727
Query: 122 CDCDPVG--SLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
C P G N C CR V G C+ C+P ++G S +P G
Sbjct: 728 GSCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGYWGLSSS-------NPEGCTR 780
Query: 180 LQCDPSGQCPGV 191
CDP G GV
Sbjct: 781 CSCDPRGTLGGV 792
Score = 170 (64.9 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 52/183 (28%), Positives = 76/183 (41%)
Query: 21 SDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLE 77
S L +V G CL C ++T G C+ C+PG++ L P C+PC C E
Sbjct: 384 SQNLDNVYQGGGVCLDCQHHTTGINCERCVPGFYRAPDQPLDSPHV-CQPCDC------E 436
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCD-------PVGSL 130
++ C+ LTG+C C+P+ G C C G+ + S + P G +
Sbjct: 437 SDFTDGTCEDLTGRCYCRPNFTGERCSACAEGYVDFPHCYPLPSFPHNDTGEQVLPAGQI 496
Query: 131 -NRTCDPITGQC-LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
N C+ Q CR RC +C+PN G + C P P + QC G
Sbjct: 497 VNCDCNAAGTQGNACRKDPRLGRC-VCKPNFQGNHCELCAPGFYGP-SCHPCQCSSPGVA 554
Query: 189 PGV 191
G+
Sbjct: 555 NGL 557
Score = 168 (64.2 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 38/113 (33%), Positives = 50/113 (44%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C C+ H G NC++C G Y + S C+ CDC+ + TC+ +TG+C C
Sbjct: 395 GVCLDCQHHTTGINCERCVPGFYRAPDQPLDSPHVCQPCDCES-DFTDGTCEDLTGRCYC 453
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRA 196
RP TG RC C + F C P P Q P+GQ N A
Sbjct: 454 RPNFTGERCSACAEGYVDFP--HCYPLPSFPHNDTGEQVLPAGQIVNCDCNAA 504
Score = 141 (54.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM 171
++ G C C VG++ TC+P GQC CR V G C C ++GF C+PC
Sbjct: 1432 SLFYNNGALPCGCHEVGAVGPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFP--NCRPCD 1489
Query: 172 CDPIGSNSLQCDP-SGQC 188
C G+ CD +GQC
Sbjct: 1490 C---GARL--CDELTGQC 1502
Score = 45 (20.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 31 TGDCLKCIYNTGGPQC 46
TG C +C NT GP C
Sbjct: 849 TGAC-RCRPNTQGPSC 863
Score = 36 (17.7 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 8/20 (40%), Positives = 8/20 (40%)
Query: 42 GGPQCDTCLPGYFGDALALP 61
GG C C PG G P
Sbjct: 5 GGQLCVGCAPGARGPRSLAP 24
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 369 (135.0 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 67/159 (42%), Positives = 91/159 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CLKC+ NT G C+ C G++GDA+ +C C+C++ G+ + VC TG
Sbjct: 867 TGECLKCLGNTDGAHCERCADGFYGDAVTAK--NCRACECHVKGS-----HSAVCHLETG 919
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CKP+V G CDQC G+Y + SG GC+ C+C GS++ C GQC C PGV G
Sbjct: 920 LCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSDGCTD-EGQCHCVPGVAGK 978
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
RC+ C Y + C PC C P N+ CDP +G+C
Sbjct: 979 RCDRCAHGFYAYQDGSCTPCDC-PHTQNT--CDPETGEC 1014
Score = 294 (108.6 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 61/171 (35%), Positives = 86/171 (50%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C+ C +NT G C+ CLPG++G+ GDC+PC C P T+ + F+P C G
Sbjct: 755 GVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGDCQPCAC--PLTIASNNFSPTCHLNDGD 812
Query: 92 ---CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRT----CDPITGQC 141
C C P G C++C G+Y + GE C CDC G+++ + CD +TG+C
Sbjct: 813 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCS--GNVDPSEAGHCDSVTGEC 870
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCD-PSGQC 188
L C G CE C YG ++ C+ C C GS+S C +G C
Sbjct: 871 LKCLGNTDGAHCERCADGFYGDAVTAKNCRACECHVKGSHSAVCHLETGLC 921
Score = 293 (108.2 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 62/170 (36%), Positives = 83/170 (48%)
Query: 26 SVAGTTGD-CLK-----CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
SVAG+ D C C+ G +CD C G++ A G C PC C P T T
Sbjct: 954 SVAGSVSDGCTDEGQCHCVPGVAGKRCDRCAHGFY----AYQDGSCTPCDC--PHTQNT- 1006
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
CD TG+C C PH G C++CE GH+ + GC++C+C VGS + CD +TG
Sbjct: 1007 -----CDPETGECVCPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTG 1061
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C C+ G C+ C + F D C PC CD G++ C+ G C
Sbjct: 1062 HCQCKSKFGGRACDQCSLGYRDFP-D-CVPCDCDLRGTSGDACNLEQGLC 1109
Score = 265 (98.3 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 56/153 (36%), Positives = 77/153 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C NT G CD C GY+G DC C C P + +F+P C L G
Sbjct: 1416 TGKCLNCGDNTAGDHCDVCTSGYYGKVTG-SASDCALCAC--PHS-PPASFSPTC-VLEG 1470
Query: 91 ----QC-SCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+C +C G +C++C +Y G C+ CDC+P GS++ CD +GQC+C
Sbjct: 1471 DHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHGDCDRTSGQCVC 1530
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
R G +G RC+ C+P H D C C + +G
Sbjct: 1531 RLGASGLRCDECEPRHILMETD-CVSCDDECVG 1562
Score = 258 (95.9 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 57/169 (33%), Positives = 84/169 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLET-----ETFTPV 84
G C+ C+ NT G C+TC+ GY+ P D C PC C G+L + + + +
Sbjct: 359 GVCINCLQNTMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDL 418
Query: 85 CD-QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+ + GQC CK G CD+C++G+ + + C SC C+PVGS + +P TG C+C
Sbjct: 419 HNGKQPGQCPCKEGYTGEKCDRCQLGYKDYPT---CVSCGCNPVGSASD--EPCTGPCVC 473
Query: 144 RPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGS--NSLQCDPSGQ 187
+ V G C+ C+P Y GC C C + +SL P GQ
Sbjct: 474 KENVEGKACDRCKPGFYNLKEKNPRGCSECFCFGVSDVCSSLSW-PVGQ 521
Score = 214 (80.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 50/155 (32%), Positives = 71/155 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+C+ C +T G +C+ C G++G DA + C+ C C + G+ CD +T
Sbjct: 1011 TGECV-CPPHTQGVKCEECEDGHWGYDA----EVGCQACNCSLVGSTHHR-----CDVVT 1060
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD---------PITGQ 140
G C CK G CDQC +G+ + C CDCD G+ C+ TG
Sbjct: 1061 GHCQCKSKFGGRACDQCSLGYRDF---PDCVPCDCDLRGTSGDACNLEQGLCGCVEETGA 1117
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C C+ V G +C C+ + D GC PC C
Sbjct: 1118 CPCKENVFGPQCNECREGTFALRADNPLGCSPCFC 1152
Score = 211 (79.3 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 65/198 (32%), Positives = 87/198 (43%)
Query: 10 VMDILLCVGPPSDIL---KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DC 65
+ DI + VG ++ L + VA +C+ C T G C C PGY L P G D
Sbjct: 1335 ISDISMEVGRKAEKLHPEEEVASLLENCV-CPPGTVGFSCQDCAPGYHRGKL--PAGSDR 1391
Query: 66 EPCQCYIPGT-LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEG--CKS 121
P P + CD TG+C +C + G +CD C G+Y ++G C
Sbjct: 1392 GPRPLVAPCVPCSCNNHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCAL 1451
Query: 122 CDC--DPVGSLNRTCDPITG----QC-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCM 171
C C P S + TC + G +C C G G CE C ++YG G C+ C
Sbjct: 1452 CACPHSPPASFSPTC-VLEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCD 1510
Query: 172 CDPIGSNSLQCD-PSGQC 188
C+P GS CD SGQC
Sbjct: 1511 CNPHGSVHGDCDRTSGQC 1528
Score = 176 (67.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 46/147 (31%), Positives = 62/147 (42%)
Query: 9 SVMDILLCVGP--PSDILKSVAGTTGD----CLKCIYNTGGPQCDTCLPGYFGDALALPK 62
S D LC P P GD C C+ G C+ C Y+G+ P
Sbjct: 1445 SASDCALCACPHSPPASFSPTCVLEGDHDFRCDACLLGYEGKHCERCSSSYYGNPQT-PG 1503
Query: 63 GDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSC 122
G C+ C C G++ + CD+ +GQC C+ G CD+CE H I+ C SC
Sbjct: 1504 GSCQKCDCNPHGSVHGD-----CDRTSGQCVCRLGASGLRCDECEPRH--ILMETDCVSC 1556
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTG 149
D + VG L D I G + +TG
Sbjct: 1557 DDECVGVLLNDLDEI-GDAVLSLNLTG 1582
Score = 175 (66.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 59/181 (32%), Positives = 80/181 (44%)
Query: 27 VAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD 86
VA C +C G C++CL GY+ L G C+PC+C+ G C+
Sbjct: 702 VAADVEHC-ECPQGYTGTSCESCLSGYYRVDGILFGGICQPCECH--G------HAAECN 752
Query: 87 QLTGQC-SCKPHVVGTNCDQCEVGHYNIIS-GE-G-CKSCDCD-PVGSLN--RTCDPITG 139
+ G C +C + G +C+QC G Y S G G C+ C C + S N TC G
Sbjct: 753 -VHGVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGDCQPCACPLTIASNNFSPTCHLNDG 811
Query: 140 Q---C-LCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC----DPIGSNSLQCDP-SGQ 187
C C PG +G CE C +YG + C PC C DP S + CD +G+
Sbjct: 812 DEVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDP--SEAGHCDSVTGE 869
Query: 188 C 188
C
Sbjct: 870 C 870
Score = 142 (55.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 37/106 (34%), Positives = 47/106 (44%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT----LETETFTPVCD 86
TG C +C GG CD C GY D P DC PC C + GT E C
Sbjct: 1060 TGHC-QCKSKFGGRACDQCSLGY-RD---FP--DCVPCDCDLRGTSGDACNLEQGLCGCV 1112
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL 130
+ TG C CK +V G C++C G + + + GC C C + L
Sbjct: 1113 EETGACPCKENVFGPQCNECREGTFALRADNPLGCSPCFCSGLSHL 1158
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 359 (131.4 bits), Expect = 9.1e-32, Sum P(2) = 9.1e-32
Identities = 69/169 (40%), Positives = 91/169 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV----CD 86
TG CL+C+Y+T GP C C PG++G A + C C C + GT + + + CD
Sbjct: 1007 TGQCLRCLYHTEGPHCAHCKPGFYGQAA---RQSCHRCTCNLLGT-DPQQCPSIDRCNCD 1062
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+GQC C P+V G CD+C +N+ SG GC+ C C P + TC+ TGQC CR G
Sbjct: 1063 PSSGQCPCLPNVQGPTCDRCAPNFWNLTSGHGCQPCTCHPSRARGPTCNEFTGQCHCRAG 1122
Query: 147 VTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGV 191
G C CQ H+G C+ C CDP G ++ QC S G C PGV
Sbjct: 1123 FGGRTCSECQELHWGDPGLQCRACDCDPHGIDTPQCHRSTGHCSCRPGV 1171
Score = 310 (114.2 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 68/177 (38%), Positives = 93/177 (52%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFT 82
+V+G G C C +NT G C+ C P ++ D L P C C C G+ +
Sbjct: 371 NVSG--GVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDP-AMCRSCDCDPMGSQDGGRCD 427
Query: 83 PVCDQ----LTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRT--C 134
P D ++GQC CK HVVG+ C QC G + + + + GC+ C CD G++ T C
Sbjct: 428 PHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDPAGCRRCQCDARGTVPGTTSC 487
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQC-DPSGQC 188
DP +G C C+ VTG C C P H+G S D GC+PC CD G+ QC + +GQC
Sbjct: 488 DPNSGTCFCKRLVTGRGCNHCLPGHWGLSHDLLGCRPCDCDVGGALDPQCSEATGQC 544
Score = 274 (101.5 bits), Expect = 8.4e-23, Sum P(2) = 8.4e-23
Identities = 56/145 (38%), Positives = 76/145 (52%)
Query: 47 DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQC 106
+ C P + L G PCQC G+L +E C+ GQC CKP VVG CD C
Sbjct: 766 EACAPLLISLSTLLYSGAL-PCQCDPQGSLSSE-----CNPHGGQCVCKPAVVGRRCDHC 819
Query: 107 EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDG 166
G Y GC++C C P G+L+ C+ +GQC CR G G RC+ CQ +GF
Sbjct: 820 APGFYGF-GPTGCQACQCSPEGALSGLCEETSGQCPCRTGAFGLRCDRCQRGQWGFP--S 876
Query: 167 CKPCMCDPIGSNSLQCDP-SGQCPG 190
C+PC+C+ ++ +CD +G C G
Sbjct: 877 CQPCVCN---GHADECDTHTGACVG 898
Score = 270 (100.1 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 53/141 (37%), Positives = 70/141 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
++G C C+ N GP CD C P ++ L G C+PC C+ P P C++ T
Sbjct: 1064 SSGQC-PCLPNVQGPTCDRCAPNFWN--LTSGHG-CQPCTCH-PSRARG----PTCNEFT 1114
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+ G C +C+ H+ G C++CDCDP G C TG C CRPGV+G
Sbjct: 1115 GQCHCRAGFGGRTCSECQELHWGD-PGLQCRACDCDPHGIDTPQCHRSTGHCSCRPGVSG 1173
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C G C PC
Sbjct: 1174 VRCDQCARGFSGV-FPACHPC 1193
Score = 260 (96.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 53/136 (38%), Positives = 71/136 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C + G +C C G+FG + + P G C CQC GT+ T CD +G
Sbjct: 438 SGQC-RCKEHVVGSRCQQCRDGFFGLSASDPAG-CRRCQCDARGTVPGTTS---CDPNSG 492
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK V G C+ C GH+ + GC+ CDCD G+L+ C TGQC CR + G
Sbjct: 493 TCFCKRLVTGRGCNHCLPGHWGLSHDLLGCRPCDCDVGGALDPQCSEATGQCRCRQHMVG 552
Query: 150 TRCELCQPNHYGFSLD 165
RCE QP ++ LD
Sbjct: 553 RRCEQVQPGYFRPFLD 568
Score = 253 (94.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 61/172 (35%), Positives = 82/172 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYI-PGTLETETFTPVC--D 86
TG C+ C +TGG C+ C+ G+ GD LP G C PC C PG+ F C D
Sbjct: 893 TGACVGCRDHTGGEHCERCIAGFHGDP-RLPYGGQCRPCPCPEGPGS--QRHFATSCHRD 949
Query: 87 QLTGQ--CSCKPHVVGTNCDQCEVGHYNIISG-EG-CKSCDC----DPVGSLNRTCDPIT 138
+ Q C C+ G C+ C GH+ S +G C+ C+C DP+ CDP T
Sbjct: 950 GYSQQIMCHCRAGYTGLRCEACAPGHFGDPSRPDGQCQPCECNGNIDPMDP--DACDPRT 1007
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
GQCL C G C C+P YG + C C C+ +G++ QC +C
Sbjct: 1008 GQCLRCLYHTEGPHCAHCKPGFYGQAARQSCHRCTCNLLGTDPQQCPSIDRC 1059
Score = 219 (82.2 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 57/171 (33%), Positives = 76/171 (44%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L S G C G +CD C PG++G P G C+ CQC
Sbjct: 784 LPCQCDPQGSLSSECNPHGGQCVCKPAVVGRRCDHCAPGFYGFG---PTG-CQACQCSPE 839
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G L + +C++ +GQC C+ G CD+C+ G + S C+ C C+ G +
Sbjct: 840 GAL-----SGLCEETSGQCPCRTGAFGLRCDRCQRGQWGFPS---CQPCVCN--GHADE- 888
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMCDPIGSNS 179
CD TG C+ CR G CE C +G G C+PC C P G S
Sbjct: 889 CDTHTGACVGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPC-PEGPGS 938
Score = 196 (74.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 56/184 (30%), Positives = 80/184 (43%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGTLETETFTPVCD 86
G C+ C +NT G C+ C ++ D P D C C+C+ G + F
Sbjct: 311 GACV-CKHNTRGLNCEQC-QDFYHDLPWRPAEDGHSHACRKCECH--GHAHSCHFDMAIY 366
Query: 87 QLTGQCS------CKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDCDPVGSLNR-TC 134
+G S C+ + G +C+ C Y S + C+SCDCDP+GS + C
Sbjct: 367 LASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDPAMCRSCDCDPMGSQDGGRC 426
Query: 135 DP--------ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
DP ++GQC C+ V G+RC+ C+ +G S DP G QCD G
Sbjct: 427 DPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSAS-------DPAGCRRCQCDARG 479
Query: 187 QCPG 190
PG
Sbjct: 480 TVPG 483
Score = 175 (66.7 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 32/74 (43%), Positives = 39/74 (52%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C CDP GSL+ C+P GQC+C+P V G RC+ C P YGF GC+ C
Sbjct: 782 GALPCQCDPQGSLSSECNPHGGQCVCKPAVVGRRCDHCAPGFYGFGPTGCQAC------- 834
Query: 178 NSLQCDPSGQCPGV 191
QC P G G+
Sbjct: 835 ---QCSPEGALSGL 845
Score = 42 (19.8 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 63 GDCEPCQCYIPGTLETET----FT-PVC 85
G P +IPGTL+ ET F PVC
Sbjct: 658 GHVLPKDDHIPGTLQPETRYMVFPRPVC 685
Score = 35 (17.4 bits), Expect = 9.1e-32, Sum P(2) = 9.1e-32
Identities = 6/12 (50%), Positives = 6/12 (50%)
Query: 178 NSLQCDPSGQCP 189
N L C P G P
Sbjct: 1411 NELVCGPPGDAP 1422
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 361 (132.1 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 67/162 (41%), Positives = 86/162 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV---CDQ 87
TG C+KC+Y+T G C C GY+G AL + DC C C GT+ + C+
Sbjct: 986 TGTCVKCLYHTEGENCHLCRQGYYGSAL---QQDCRKCVCNYLGTVREDCDDAENCRCEA 1042
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC C P VVG CD+C + + SG GC+ CDCD S+ C+ TGQC C PG
Sbjct: 1043 ATGQCRCLPGVVGQTCDRCAPNTWRLASGTGCEPCDCDTARSIGLACNEFTGQCHCMPGF 1102
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
G C CQ +G C+ C C+P G + QCD +GQC
Sbjct: 1103 GGRTCRECQELFWGDPSVECRACDCNPRGIQTPQCDRATGQC 1144
Score = 310 (114.2 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 69/180 (38%), Positives = 91/180 (50%)
Query: 23 ILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDALA-LPKGD-CEPCQCYIPGTLE-- 77
+ + T+G C C +NT G C+ C P YF L D CEPC C G+
Sbjct: 341 VYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGG 400
Query: 78 -TETFTPVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--N 131
+ +T L GQC CK V G CD C+ G Y + + + GC+SC C+P+G+
Sbjct: 401 VCDRYTDFSTGLIAGQCRCKLFVEGERCDLCKEGFYGLSADDPSGCQSCACNPLGTHPGG 460
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCDP-SGQC 188
CD TG C C+ VTG +C C P H+G S +DGC+PC CD G+ C SGQC
Sbjct: 461 NPCDSETGNCYCKRLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALHNNCSSESGQC 520
Score = 284 (105.0 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 65/171 (38%), Positives = 83/171 (48%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L SV +G +C N G QC+ C PG FG P G C PC+C++
Sbjct: 763 LSCQCDPQGSLSSVCDPSGGQCQCRPNVVGRQCNRCAPGTFGFG---PSG-CRPCECHLR 818
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G+ + CD TGQC C P V G CD+C G + S C+ C C+ G +
Sbjct: 819 GS-----YNSFCDAETGQCHCFPGVYGRQCDRCLPGFWGFPS---CQPCHCN--GHAD-D 867
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYGFSL----DGCKPCMCDPIGSNS 179
C P TG+CL CR G CE C+ +YG + D C+PC C P G S
Sbjct: 868 CSPYTGECLHCRDHTAGPNCERCEAGYYGDPILGSGDHCRPCPC-PDGPES 917
Score = 281 (104.0 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 64/183 (34%), Positives = 90/183 (49%)
Query: 11 MDILLCVGPPSDILKSVAGTTGDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDCE 66
+DI G D++ + A T +C+ N+ P D C F + AL
Sbjct: 705 LDIFTVGGSGEDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSIS-ALLHETAL 763
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
CQC G+L + VCD GQC C+P+VVG C++C G + GC+ C+C
Sbjct: 764 SCQCDPQGSLSS-----VCDPSGGQCQCRPNVVGRQCNRCAPGTFGF-GPSGCRPCECHL 817
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GS N CD TGQC C PGV G +C+ C P +GF C+PC C+ ++ C P +
Sbjct: 818 RGSYNSFCDAETGQCHCFPGVYGRQCDRCLPGFWGFP--SCQPCHCN---GHADDCSPYT 872
Query: 186 GQC 188
G+C
Sbjct: 873 GEC 875
Score = 271 (100.5 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 59/169 (34%), Positives = 83/169 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVC--DQ 87
TG+CL C +T GP C+ C GY+GD + L GD C PC C G F C D
Sbjct: 872 TGECLHCRDHTAGPNCERCEAGYYGDPI-LGSGDHCRPCPCP-DGPESGRQFASGCYQDP 929
Query: 88 LTGQ--CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDP-VGSLN-RTCDPITGQC 141
+T Q C C +G+ CD+C G + G C+ C C+ + S + CD TG C
Sbjct: 930 VTLQVVCVCSTGYIGSRCDECASGFFGSPDEVGGACQPCQCNNNIDSTDPEACDKRTGTC 989
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDPSGQC 188
+ C G C LC+ +YG +L C+ C+C+ +G+ CD + C
Sbjct: 990 VKCLYHTEGENCHLCRQGYYGSALQQDCRKCVCNYLGTVREDCDDAENC 1038
Score = 260 (96.6 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 51/135 (37%), Positives = 70/135 (51%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C G +CD C G++G + P G C+ C C L T CD TG
Sbjct: 415 GQC-RCKLFVEGERCDLCKEGFYGLSADDPSG-CQSCAC---NPLGTHPGGNPCDSETGN 469
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK V G C+QC H+ + + +GC+ CDCD G+L+ C +GQC CRP + G
Sbjct: 470 CYCKRLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALHNNCSSESGQCECRPHMFGR 529
Query: 151 RCELCQPNHYGFSLD 165
+C +P +Y SLD
Sbjct: 530 QCNQVEPGYYFISLD 544
Score = 258 (95.9 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 54/140 (38%), Positives = 70/140 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C+ G CD C P + LA G CEPC C ++ C++ TG
Sbjct: 1044 TGQC-RCLPGVVGQTCDRCAPNTW--RLASGTG-CEPCDCDTARSIGL-----ACNEFTG 1094
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P G C +C+ + S E C++CDC+P G CD TGQC+C GV G
Sbjct: 1095 QCHCMPGFGGRTCRECQELFWGDPSVE-CRACDCNPRGIQTPQCDRATGQCICNEGVEGP 1153
Query: 151 RCELCQPNHYGFSLDGCKPC 170
RC+ C + GF D C PC
Sbjct: 1154 RCDKCSRGYSGFFPD-CVPC 1172
Score = 217 (81.4 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 40/80 (50%), Positives = 47/80 (58%)
Query: 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
E SC CDP GSL+ CDP GQC CRP V G +C C P +GF GC+PC C G
Sbjct: 760 ETALSCQCDPQGSLSSVCDPSGGQCQCRPNVVGRQCNRCAPGTFGFGPSGCRPCECHLRG 819
Query: 177 SNSLQCDP-SGQC---PGVF 192
S + CD +GQC PGV+
Sbjct: 820 SYNSFCDAETGQCHCFPGVY 839
Score = 161 (61.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 54/192 (28%), Positives = 78/192 (40%)
Query: 19 PPSDILKSVAGTT-GDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIP 73
P + V G G C+ C +NT G C+ CL Y + A C+ C C
Sbjct: 273 PVEGFSEEVEGMVHGHCM-CRHNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGH 331
Query: 74 GT---LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDC 124
T + + + G C C+ + VG NC+QC+ ++ ++ + C+ C+C
Sbjct: 332 STQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNC 391
Query: 125 DPVGSLNR-TCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMC-----DPIGSN 178
DP GS N CD T G+ +C C+ G D CK DP G
Sbjct: 392 DPAGSQNGGVCDRYTD---FSTGLIAGQCR-CKLFVEGERCDLCKEGFYGLSADDPSGCQ 447
Query: 179 SLQCDPSGQCPG 190
S C+P G PG
Sbjct: 448 SCACNPLGTHPG 459
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 362 (132.5 bits), Expect = 2.5e-31, P = 2.5e-31
Identities = 67/159 (42%), Positives = 87/159 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CLKCI NT G C+ C G++GDA+ +C C+C+ G++ + VC TG
Sbjct: 820 TGECLKCIGNTDGAHCERCADGFYGDAVTAK--NCRACECHGKGSI-----SDVCHLDTG 872
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CKPHV G CDQC G+Y + +G GC C+C GS++ C GQC C PGV G
Sbjct: 873 LCDCKPHVTGQQCDQCLPGYYGLDTGLGCLPCNCSASGSMSDDCTE-DGQCHCLPGVAGE 931
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C Y + GC PC C CDP SG C
Sbjct: 932 KCDRCARGFYAYQDGGCTPCDC---AHTQHTCDPESGAC 967
Score = 294 (108.6 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 62/153 (40%), Positives = 80/153 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C ++T G CD C PGY+G DC PC C P + +F+P C L G
Sbjct: 1369 TGKCLNCSHSTTGEHCDVCAPGYYGKVTG-SASDCSPCAC--PRS-HPASFSPTC-VLEG 1423
Query: 91 QCS--CKPHVVGTN---CDQCEVG-HYNIIS-GEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C V+G C++C G H N + G C+ CDC P GS++ CD +GQC+C
Sbjct: 1424 DADFRCDACVLGYEGQYCERCSSGYHGNPRALGGTCQRCDCSPSGSVHGDCDRGSGQCVC 1483
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
RPG TG RCE C+P H D C C + +G
Sbjct: 1484 RPGATGLRCEQCEPRHILLESD-CVSCDDECVG 1515
Score = 271 (100.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 58/158 (36%), Positives = 74/158 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C+ G +CD C G++ A G C PC C T T CD +G
Sbjct: 920 GQC-HCLPGVAGEKCDRCARGFY----AYQDGGCTPCDC--AHTQHT------CDPESGA 966
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C PH G CDQCE G++ GC++C+C VGS + CD +TG C C+P G
Sbjct: 967 CICPPHTRGATCDQCEDGYWGHDLELGCQACNCSAVGSASHGCDALTGHCPCKPAFGGLS 1026
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C C + F D C C CD G+ + CD G C
Sbjct: 1027 CHQCSLGYRDFP-D-CVACDCDLRGTLADTCDEEQGLC 1062
Score = 251 (93.4 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 54/163 (33%), Positives = 76/163 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCD--- 86
G C+ C+ NT G C+TC+ GY+ P D C PC C G+L +
Sbjct: 312 GVCINCLQNTVGINCETCIDGYYRPHKVSPYEDNPCRPCDCDPFGSLSSVCIKDELQSGL 371
Query: 87 ---QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+ GQC CK G CD+C+ G+ + C C+C GS+N DP + CLC
Sbjct: 372 HKGKQPGQCPCKEGYAGEKCDRCQFGYK---AYPACIRCECSRAGSVNE--DPCSEPCLC 426
Query: 144 RPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCD 183
+ V G C+LC+P Y + +GC C C G + + CD
Sbjct: 427 KENVEGDNCDLCKPGFYNLKERNPEGCSECFC--FGVSDV-CD 466
Score = 250 (93.1 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 58/171 (33%), Positives = 80/171 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C +NT G C+ C PG++G GDC+ C C P + + F+P C G
Sbjct: 708 GVCSVCKHNTTGDHCEQCAPGFYGLPSRGTPGDCQRCAC--PLSTTSNNFSPTCHLEAGD 765
Query: 92 ---CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQC 141
C C P G+ C++C G+Y + GE C C+C DP + + CD +TG+C
Sbjct: 766 EVVCDQCAPGYSGSWCERCADGYYGNPTVPGESCVPCNCSGNVDPFEAGH--CDSVTGEC 823
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCD-PSGQC 188
L C G CE C YG ++ C+ C C GS S C +G C
Sbjct: 824 LKCIGNTDGAHCERCADGFYGDAVTAKNCRACECHGKGSISDVCHLDTGLC 874
Score = 242 (90.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 56/154 (36%), Positives = 71/154 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +T G CD C GY+G L L C+ C C G+ CD LTG
Sbjct: 964 SGACI-CPPHTRGATCDQCEDGYWGHDLEL---GCQACNCSAVGSASHG-----CDALTG 1014
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI---------TGQC 141
C CKP G +C QC +G+ + C +CDCD G+L TCD TG C
Sbjct: 1015 HCPCKPAFGGLSCHQCSLGYRDF---PDCVACDCDLRGTLADTCDEEQGLCSCAEDTGTC 1071
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G +C C+ Y D GC PC C
Sbjct: 1072 SCKENVLGLQCSECRAGTYALHADDPLGCIPCFC 1105
Score = 204 (76.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 63/196 (32%), Positives = 90/196 (45%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+ L P+ I ++A C +C G C++CLPGY+ L G C+PC+C+
Sbjct: 641 VSLDTASPNVIDLALATEVEHC-ECPQGYAGISCESCLPGYYRVDGILFGGICQPCECH- 698
Query: 73 PGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIIS-GE-G-CKSCDCDPVG 128
G CD + G CS CK + G +C+QC G Y + S G G C+ C C P+
Sbjct: 699 -G------HAAECD-IHGVCSVCKHNTTGDHCEQCAPGFYGLPSRGTPGDCQRCAC-PLS 749
Query: 129 SLNR----TCDPITGQ---C-LCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC----D 173
+ + TC G C C PG +G+ CE C +YG + C PC C D
Sbjct: 750 TTSNNFSPTCHLEAGDEVVCDQCAPGYSGSWCERCADGYYGNPTVPGESCVPCNCSGNVD 809
Query: 174 PIGSNSLQCDP-SGQC 188
P + CD +G+C
Sbjct: 810 PFEAG--HCDSVTGEC 823
Score = 198 (74.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 63/192 (32%), Positives = 79/192 (41%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCE-PCQCYIPGT-LETETFT 82
+ VA CL C T G C C PGY L P+G P P +
Sbjct: 1306 REVASLLEKCL-CPPGTAGFSCQDCAPGYHRGKL--PQGGSRGPRPLLAPCVPCNCNNHS 1362
Query: 83 PVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDC--DPVGSLNRTCDPI 137
CD TG+C +C G +CD C G+Y ++G C C C S + TC +
Sbjct: 1363 DACDPETGKCLNCSHSTTGEHCDVCAPGYYGKVTGSASDCSPCACPRSHPASFSPTC-VL 1421
Query: 138 TG----QC-LCRPGVTGTRCELCQPNHYGF--SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
G +C C G G CE C ++G +L G C+ C C P GS CD SGQC
Sbjct: 1422 EGDADFRCDACVLGYEGQYCERCSSGYHGNPRALGGTCQRCDCSPSGSVHGDCDRGSGQC 1481
Query: 189 ---PGVFMNRAE 197
PG R E
Sbjct: 1482 VCRPGATGLRCE 1493
Score = 172 (65.6 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 39/116 (33%), Positives = 55/116 (47%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C+ G C+ C GY G+ AL G C+ C C G++ + CD+ +GQC
Sbjct: 1429 CDACVLGYEGQYCERCSSGYHGNPRALG-GTCQRCDCSPSGSVHGD-----CDRGSGQCV 1482
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C+P G C+QCE H I+ C SCD + VG L + G + +TG
Sbjct: 1483 CRPGATGLRCEQCEPRH--ILLESDCVSCDDECVGVLLNDLGNV-GDTILSVNLTG 1535
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 41/115 (35%), Positives = 53/115 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL----ETETFTPVCD 86
TG C C GG C C GY D P DC C C + GTL + E C
Sbjct: 1013 TGHC-PCKPAFGGLSCHQCSLGY-RD---FP--DCVACDCDLRGTLADTCDEEQGLCSCA 1065
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITG 139
+ TG CSCK +V+G C +C G Y + + + GC C C G L++ C + G
Sbjct: 1066 EDTGTCSCKENVLGLQCSECRAGTYALHADDPLGCIPCFC--FG-LSQACSELEG 1117
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 328 (120.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 63/149 (42%), Positives = 86/149 (57%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C G P ++ TTG+C+ C NT G C+ C GY+GD P C+PC C+ G+
Sbjct: 976 CAGGPCNV------TTGECITCRGNTEGWHCERCKLGYWGD----PAVGCDPCHCHTEGS 1025
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT-C 134
E+ +CD GQC CKP G CD+C+VG+ N+ C SC+CDP+GSL + C
Sbjct: 1026 ---ES--GLCDSTDGQCLCKPRYAGQKCDECDVGYANVELR--CPSCNCDPLGSLVQDRC 1078
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFS 163
DP TGQC C+ GV G +C CQ ++G +
Sbjct: 1079 DPHTGQCHCKEGVMGAKCHECQDGYFGMN 1107
Score = 313 (115.2 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 55/125 (44%), Positives = 73/125 (58%)
Query: 65 CEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC 124
CE C C G+L ++ CD+ TGQC+C +V G CD+C GH+N+ +GEGC+ C C
Sbjct: 1147 CEECHCSSVGSLSSD-----CDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRC 1201
Query: 125 DPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
DP GS C+P TGQC C+ GV G C C +GFS +GC+ C S CDP
Sbjct: 1202 DPHGSRGHECNPWTGQCDCKIGVGGQHCNECTEGFFGFSTEGCQ--RCSACRSEGQVCDP 1259
Query: 185 -SGQC 188
+G+C
Sbjct: 1260 HNGRC 1264
Score = 275 (101.9 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 58/165 (35%), Positives = 80/165 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ-CYIPGTLETETFTPVCDQLT 89
TG C C GG C+ C G+FG + +G C+ C C G VCD
Sbjct: 1215 TGQC-DCKIGVGGQHCNECTEGFFGFST---EG-CQRCSACRSEGQ--------VCDPHN 1261
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
G+C C G C QC G + + GC+ C+CD +GS+ + C GQC CR G +G
Sbjct: 1262 GRCICPKFTRGLGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQCQCREGYSG 1321
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGS-----NSLQCDPSGQCP 189
+C+ C ++G+ C+ C CD GS S+ CD +GQCP
Sbjct: 1322 RKCDTCAIGYFGYP--ECRRCGCDAEGSFTQADGSIACDSNGQCP 1364
Score = 271 (100.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 61/161 (37%), Positives = 80/161 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C+ N G +CD C PG++ L +G C C+C G+ E C+ TG
Sbjct: 1166 TGQCA-CLANVTGRRCDKCRPGHWN--LTAGEG-CRDCRCDPHGSRGHE-----CNPWTG 1216
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCD-CDPVGSLNRTCDPITGQCLCRPGVTG 149
QC CK V G +C++C G + S EGC+ C C G + CDP G+C+C G
Sbjct: 1217 QCDCKIGVGGQHCNECTEGFFGF-STEGCQRCSACRSEGQV---CDPHNGRCICPKFTRG 1272
Query: 150 TRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDPS-GQC 188
C C P +G+ GC+ C CD IGS QC GQC
Sbjct: 1273 LGCGQCVPGTWGWQARLGCRECECDHIGSIGQQCSTGDGQC 1313
Score = 267 (99.0 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 58/160 (36%), Positives = 77/160 (48%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C G SD + TG C C NTGG C C G++GD + P G C+ C C P T
Sbjct: 1672 CNGRSSDCDRE----TGVCQNCRGNTGGDHCHQCAEGFYGDPNS-PHG-CQACPC--PET 1723
Query: 76 LETETFTPVCDQLTGQ--CSCKPHVVGTNCDQCEVGHYNI---ISGEGCKSCDCDPVGSL 130
F C+ G+ C CKP G C++C+ G++ C+ C+C P G
Sbjct: 1724 --NRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQ 1781
Query: 131 NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPC 170
CD TG+C CR GVTG +C+ CQ + +GCK C
Sbjct: 1782 TEGCDVETGRCYCREGVTGLKCDKCQAERHHLVDNGCKIC 1821
Score = 265 (98.3 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 62/162 (38%), Positives = 77/162 (47%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C+ C +NT G QC+ C P F D G+CE CQCY G E+ T+ P D+ G C
Sbjct: 420 CI-CQHNTCGAQCEQCCP-LFQDRPYQMGGECEICQCY--GHAESCTYDPFLDK--GICQ 473
Query: 93 SCKPHVVGTNCDQCEVGHYNIISG---EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
SC + G C+ CE+G Y + + C C C+P S C G C C G G
Sbjct: 474 SCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTGG-CQSDGGSCNCLEGFQG 532
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGV 191
CE C P +YG D CK C CD GS +G C GV
Sbjct: 533 KNCEECAPGYYG---DDCKRCECDERGS----LGSTGSCSGV 567
Score = 256 (95.2 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 55/158 (34%), Positives = 78/158 (49%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C +C G C C GYFG+ P C+ C C G P C+ TG+C
Sbjct: 941 CTQCPEGYTGDHCQVCDDGYFGNPRQ-PGSSCQRCDC--AGG-------P-CNVTTGECI 989
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
+C+ + G +C++C++G++ GC C C GS + CD GQCLC+P G +C
Sbjct: 990 TCRGNTEGWHCERCKLGYWGD-PAVGCDPCHCHTEGSESGLCDSTDGQCLCKPRYAGQKC 1048
Query: 153 ELCQPNHYGFSLDGCKPCMCDPIGSNSL-QCDP-SGQC 188
+ C + L C C CDP+GS +CDP +GQC
Sbjct: 1049 DECDVGYANVELR-CPSCNCDPLGSLVQDRCDPHTGQC 1085
Score = 231 (86.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 58/179 (32%), Positives = 83/179 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD---- 86
+G+C C++NT G +C+ C GY+G+ L DC+ C C P + ++ F+P C
Sbjct: 865 SGNCGDCMHNTFGDRCERCQLGYYGNPLQGTPNDCKRCAC--PLSEDSNNFSPSCQLKSY 922
Query: 87 ---QLTGQ----------CS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCD-CDPVGSLN 131
L Q C+ C G +C C+ G++ G SC CD G
Sbjct: 923 NYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFGNPRQPG-SSCQRCDCAGG-- 979
Query: 132 RTCDPITGQCL-CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C+ TG+C+ CR G CE C+ ++G GC PC C GS S CD + GQC
Sbjct: 980 -PCNVTTGECITCRGNTEGWHCERCKLGYWGDPAVGCDPCHCHTEGSESGLCDSTDGQC 1037
Score = 230 (86.0 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 51/148 (34%), Positives = 69/148 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVCDQLTG 90
G C C NT G +C+ C G++ + L P D C PC C P T C G
Sbjct: 470 GICQSCSNNTAGIECEFCEMGFYRE-LDAPLTDPCLPCSCN-PARS-----TGGCQSDGG 522
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C+C G NC++C G+Y G+ CK C+CD GSL T +G C C+ V G+
Sbjct: 523 SCNCLEGFQGKNCEECAPGYY----GDDCKRCECDERGSLGST-GSCSGVCQCKLNVEGS 577
Query: 151 RCELCQPNHYGFSLD---GCKPCMCDPI 175
C C P ++ S + GC C C +
Sbjct: 578 TCSECAPGYFDLSAENAEGCTSCWCSGV 605
Score = 214 (80.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL-DGCKPC 170
N S C+ C C VGSL+ CD TGQC C VTG RC+ C+P H+ + +GC+ C
Sbjct: 1140 NSESTVACEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDC 1199
Query: 171 MCDPIGSNSLQCDP-SGQC 188
CDP GS +C+P +GQC
Sbjct: 1200 RCDPHGSRGHECNPWTGQC 1218
Score = 204 (76.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 50/162 (30%), Positives = 72/162 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C+ C T G C C+PG +G L C C+C G++ + C GQ
Sbjct: 1262 GRCI-CPKFTRGLGCGQCVPGTWGWQARL---GCRECECDHIGSIGQQ-----CSTGDGQ 1312
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT-----CDPITGQCLCRPG 146
C C+ G CD C +G++ C+ C CD GS + CD GQC C+
Sbjct: 1313 CQCREGYSGRKCDTCAIGYFGYPE---CRRCGCDAEGSFTQADGSIACDS-NGQCPCKSL 1368
Query: 147 VTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQCDPS 185
V G +C+ C + +G S +GC C C G + +C+ S
Sbjct: 1369 VVGLKCDTCMQSTFGLSAQNPEGCTRCFC--FGRSG-ECEQS 1407
Score = 197 (74.4 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 41/114 (35%), Positives = 61/114 (53%)
Query: 85 CDQLTGQC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVG-SLNRTCDPITGQ- 140
CD+ TG C +C+ + G +C QC G Y + S GC++C C + R C+ G+
Sbjct: 1679 CDRETGVCQNCRGNTGGDHCHQCAEGFYGDPNSPHGCQACPCPETNRNFARGCNVWDGEV 1738
Query: 141 -CLCRPGVTGTRCELCQPNHYG----FSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C+C+PG TG CE CQ ++G + C+PC C P G + CD +G+C
Sbjct: 1739 SCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCHPDGIQTEGCDVETGRC 1792
Score = 190 (71.9 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 34/91 (37%), Positives = 50/91 (54%)
Query: 35 LKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
+ C+ G G C+ C GYFGD + P C+PC C+ P ++TE CD TG+C
Sbjct: 1738 VSCVCKPGYTGRLCERCQAGYFGDPMRYPNTTCQPCNCH-PDGIQTEG----CDVETGRC 1792
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGCKSCD 123
C+ V G CD+C+ ++++ GCK CD
Sbjct: 1793 YCREGVTGLKCDKCQAERHHLVDN-GCKICD 1822
Score = 132 (51.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 37/109 (33%), Positives = 45/109 (41%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG-------CKSCDCDPVGSLNRTCDPITGQCL- 142
QC C G +C+ C G I C C C+ G N +CD +G C
Sbjct: 814 QCLCPAGYTGLSCEGCAFGFKRIYENTSDHQILSKCIPCPCN--GHSN-SCDLQSGNCGD 870
Query: 143 CRPGVTGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPSGQ 187
C G RCE CQ +YG L G CK C C P+ +S PS Q
Sbjct: 871 CMHNTFGDRCERCQLGYYGNPLQGTPNDCKRCAC-PLSEDSNNFSPSCQ 918
Score = 81 (33.6 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 18/45 (40%), Positives = 20/45 (44%)
Query: 29 GTTGDC---LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC 70
G+TG C +C N G C C PGYF D A C C C
Sbjct: 559 GSTGSCSGVCQCKLNVEGSTCSECAPGYF-DLSAENAEGCTSCWC 602
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 356 (130.4 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 71/168 (42%), Positives = 86/168 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETET-FTPVC--DQ 87
TG CL+C++NT GP C C PG+ G A + C C C + GT T +C D
Sbjct: 1005 TGQCLRCLHNTEGPHCGYCKPGFHGQAA---RQSCHRCTCNLLGTDPRRCPSTDLCHCDP 1061
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC C PHV G NCD C +N SG GC+ C C P + TC+ TGQC C G
Sbjct: 1062 STGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHPSRARGPTCNEFTGQCHCHAGF 1121
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGV 191
G C CQ ++G C+ C CDP G + QC S G C PGV
Sbjct: 1122 GGRTCSECQELYWGDPGLQCRACDCDPRGIDKPQCHRSTGHCSCRPGV 1169
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 66/176 (37%), Positives = 95/176 (53%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLE---TET 80
+V+G G C C +NT G C+ C P ++ D + C PC C G+ + ++
Sbjct: 371 NVSG--GVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAVCRPCDCDPMGSQDGGRCDS 428
Query: 81 FT-PVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTCD 135
PV ++GQC CK HVVGT C QC G + + + + GC+ C C+ G++ + CD
Sbjct: 429 HDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRGCQRCQCNSRGTVPGSSPCD 488
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDPS-GQC 188
+G C C+ VTG C+ C P H+G S D GC+PC CD G+ QCD + GQC
Sbjct: 489 SSSGTCFCKRLVTGHGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQC 544
Score = 290 (107.1 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 58/148 (39%), Positives = 78/148 (52%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC 103
P +TC P + + G PCQC G+L +E C GQC CKP VVG C
Sbjct: 761 PLSETCAPLLISVSALIYNGAL-PCQCDPQGSLSSE-----CSPHGGQCRCKPGVVGRRC 814
Query: 104 DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS 163
D C G+Y GC++C C P G+L+ C+ +GQC CRPG G RC+ CQ +GF
Sbjct: 815 DVCATGYYGF-GPAGCQACQCSPDGALSALCEGTSGQCPCRPGAFGLRCDHCQRGQWGFP 873
Query: 164 LDGCKPCMCDPIGSNSLQCDP-SGQCPG 190
C+PC+C+ + +CD +G C G
Sbjct: 874 --NCRPCVCN---GRADECDTHTGACLG 896
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 55/136 (40%), Positives = 76/136 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C + G +C C G+FG + + P+G C+ CQC GT+ + P CD +G
Sbjct: 438 SGQC-RCKEHVVGTRCQQCRDGFFGLSASDPRG-CQRCQCNSRGTVPGSS--P-CDSSSG 492
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK V G CD+C GH+ + GC+ CDCD G+L+ CD TGQC CR + G
Sbjct: 493 TCFCKRLVTGHGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQCRCRQHMIG 552
Query: 150 TRCELCQPNHYGFSLD 165
RCE QP ++ LD
Sbjct: 553 RRCEQVQPGYFRPFLD 568
Score = 252 (93.8 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 60/172 (34%), Positives = 80/172 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYI-PGTLETETFTPVC--D 86
TG CL C TGG C+ C+ G+ GD LP G C PC C PG+ F C D
Sbjct: 891 TGACLGCRDYTGGEHCERCIAGFHGDP-RLPYGGQCRPCPCPEGPGS--QRHFATSCHRD 947
Query: 87 QLTGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDC----DPVGSLNRTCDPIT 138
+ Q C C+ G C+ C GH+ S G C+ C+C DP+ CDP T
Sbjct: 948 GYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPMDP--DACDPHT 1005
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
GQCL C G C C+P +G + C C C+ +G++ +C + C
Sbjct: 1006 GQCLRCLHNTEGPHCGYCKPGFHGQAARQSCHRCTCNLLGTDPRRCPSTDLC 1057
Score = 251 (93.4 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 53/151 (35%), Positives = 71/151 (47%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
PS L +TG C C+ + G CD C P ++ +G C+PC C+ P
Sbjct: 1052 PSTDLCHCDPSTGQC-PCLPHVQGLNCDHCAPNFWN--FTSGRG-CQPCACH-PSRARG- 1105
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
P C++ TGQC C G C +C+ ++ G C++CDCDP G C TG
Sbjct: 1106 ---PTCNEFTGQCHCHAGFGGRTCSECQELYWGD-PGLQCRACDCDPRGIDKPQCHRSTG 1161
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPC 170
C CRPGV+G RC+ C G C PC
Sbjct: 1162 HCSCRPGVSGVRCDQCARGFSGV-FPACHPC 1191
Score = 228 (85.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 58/171 (33%), Positives = 73/171 (42%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L S G +C G +CD C GY+G P G C+ CQC
Sbjct: 782 LPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFG---PAG-CQACQCSPD 837
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G L +C+ +GQC C+P G CD C+ G + C+ C C+ G +
Sbjct: 838 GALSA-----LCEGTSGQCPCRPGAFGLRCDHCQRGQWGF---PNCRPCVCN--GRADE- 886
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMCDPIGSNS 179
CD TG CL CR G CE C +G G C+PC C P G S
Sbjct: 887 CDTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPC-PEGPGS 936
Score = 175 (66.7 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 52/182 (28%), Positives = 78/182 (42%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQC--YIPGT-LETETFTP 83
G C+ C +NT G C+ C ++ D P D C C+C + + +
Sbjct: 311 GACI-CKHNTRGLNCEQC-QDFYQDLPWHPAEDGHTHACRKCECNGHTHSCHFDMAVYLA 368
Query: 84 VCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNR-TCD- 135
+ G C C+ + G +C+ C Y ++ C+ CDCDP+GS + CD
Sbjct: 369 SGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDPTKDMRDPAVCRPCDCDPMGSQDGGRCDS 428
Query: 136 ---PI----TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
P+ +GQC C+ V GTRC+ C+ +G S DP G QC+ G
Sbjct: 429 HDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSAS-------DPRGCQRCQCNSRGTV 481
Query: 189 PG 190
PG
Sbjct: 482 PG 483
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 359 (131.4 bits), Expect = 6.4e-31, P = 6.4e-31
Identities = 72/187 (38%), Positives = 97/187 (51%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE 77
G P+ + TG C C+ +T GP+C++C PG++G+AL LP G+C C C GT
Sbjct: 1936 GDPNMLFSDCDPLTGTCRGCLRHTTGPRCESCAPGFYGNAL-LP-GNCTRCDCSPCGT-- 1991
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
CD +G C CK V G CD+C+ GH+ EGC+ C C P + C P
Sbjct: 1992 -----EACDPHSGHCLCKAGVTGLRCDRCQEGHFGFEGCEGCRPCACGPAAESSE-CHPQ 2045
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC---PGVFM 193
+GQC CRPG G +C C P H+G GC+ C C G + CD +G+C PG+
Sbjct: 2046 SGQCHCRPGTGGPQCRECAPGHWGLPEQGCRRCQCQ--GGH---CDLHTGRCTCPPGLGG 2100
Query: 194 NRAEMSS 200
R E S
Sbjct: 2101 ERCETCS 2107
Score = 293 (108.2 bits), Expect = 6.4e-24, P = 6.4e-24
Identities = 62/147 (42%), Positives = 72/147 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C T P C C P FG P CE C C PG E P CD +G
Sbjct: 1460 TGQCI-CPPRTIPPDCLVCQPQTFG---CHPLVGCEECNCSGPGV--QELMDPTCDADSG 1513
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G CD C G + S C+ CDC GS TCDP+TGQC C+ V G
Sbjct: 1514 QCKCRPNVAGRRCDTCAPGFHGFPS---CRPCDCHEAGSAPGTCDPLTGQCYCKENVQGP 1570
Query: 151 RCELCQPNHYGFSLD-----GCKPCMC 172
RC+ C+ FSLD GC C C
Sbjct: 1571 RCDQCRLGT--FSLDAANPKGCTRCFC 1595
Score = 284 (105.0 bits), Expect = 5.8e-23, P = 5.8e-23
Identities = 61/169 (36%), Positives = 79/169 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C G+ P C C C P + + F C G
Sbjct: 1837 SGVCIGCQHNTEGDHCERCQAGFVRTGSEDPAAPCISCPC--PLAVPSNNFATGCILRGG 1894
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRT---CDPITGQCL- 142
QC CKP G +C++C G + ++ G C+ CDC G N CDP+TG C
Sbjct: 1895 RTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMLFSDCDPLTGTCRG 1954
Query: 143 CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
C TG RCE C P YG +L C C C P G+ + CDP SG C
Sbjct: 1955 CLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSPCGTEA--CDPHSGHC 2001
Score = 279 (103.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 61/161 (37%), Positives = 77/161 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C + G C C GY+G P C PC C G L CD+LTGQ
Sbjct: 1420 GQC-PCRAHVIGRDCSRCATGYWG----FPS--CRPCDC--SGRL--------CDELTGQ 1462
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGS---LNRTCDPITGQCLCRPGVT 148
C C P + +C C+ + GC+ C+C G ++ TCD +GQC CRP V
Sbjct: 1463 CICPPRTIPPDCLVCQPQTFGCHPLVGCEECNCSGPGVQELMDPTCDADSGQCKCRPNVA 1522
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RC+ C P +GF C+PC C GS CDP +GQC
Sbjct: 1523 GRRCDTCAPGFHGFP--SCRPCDCHEAGSAPGTCDPLTGQC 1561
Score = 275 (101.9 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 66/181 (36%), Positives = 84/181 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C ++T G C+ CLPG++ L P C C C E++ C+ L
Sbjct: 373 GVCIDCQHHTTGINCEQCLPGFYRSPDHPLDSPHA-CRRCNC------ESDFTDGTCEDL 425
Query: 89 TGQCSCKPHVVGTNCDQCEVG-----H-YNIIS------GE-----G-CKSCDCDPVGSL 130
TG+C C+P+ G CD C G H Y + S GE G +CDC G+
Sbjct: 426 TGRCYCRPNFTGARCDACAEGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVNCDCSAAGTQ 485
Query: 131 NRTC--DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQ 187
C DP G C+C+P GT CELC P YG GC+PC C G CD SGQ
Sbjct: 486 GNACRKDPQVGHCVCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVVDGTCDRDSGQ 542
Query: 188 C 188
C
Sbjct: 543 C 543
Score = 262 (97.3 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 61/173 (35%), Positives = 78/173 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--F-----------GDA--LALPKGDCEPCQCYIPGT 75
TG C C N G +CD C G+ F D LP G C C GT
Sbjct: 426 TGRCY-CRPNFTGARCDACAEGFTDFPHCYPVPSSSHNDTGEQVLPAGHIVNCDCSAAGT 484
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
D G C CKP+ GT+C+ C G Y G GC+ C C G ++ TCD
Sbjct: 485 QGNACRK---DPQVGHCVCKPNFQGTHCELCAPGFY----GPGCQPCQCSSPGVVDGTCD 537
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+GQC CR G G C+ C P ++ F L C+ C C P+G+ CD +G+C
Sbjct: 538 RDSGQCTCRTGFEGAACDRCAPGYFHFPL--CQLCGCSPVGTLPEGCDDAGRC 588
Score = 258 (95.9 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 61/176 (34%), Positives = 77/176 (43%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
LC P L G CL C GP CD C GY G P +C C C G
Sbjct: 569 LCGCSPVGTLPEGCDDAGRCL-CRPEFNGPHCDRCRLGYHG----YP--ECHACACDPRG 621
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
+++ +C G C C G+ C +C G + C C C P GSL+ C
Sbjct: 622 SVDQ-----LCGA-GGLCRCCSGYAGSTCQECSPGFHGF---PDCAPCHCSPEGSLHAAC 672
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG-SNSLQCDPSGQCP 189
DP +GQC CRP VTG RC++C P Y F C+ C P G + + + P Q P
Sbjct: 673 DPHSGQCSCRPRVTGLRCDMCVPGAYNFPY--CEAGSCHPAGLAPADRVPPEAQAP 726
Score = 257 (95.5 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 49/126 (38%), Positives = 67/126 (53%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C + GP CD C PG++G + + P+G C C C GTL C GQC CKP
Sbjct: 729 CRAHVEGPSCDRCKPGFWGLSPSNPEG-CTRCNCDPRGTLGGAA---QCQLGNGQCFCKP 784
Query: 97 HVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
HV G C C+ G + + + GC+SC CD G+L ++C+ TG C+CRP G+ C
Sbjct: 785 HVCGQTCAACKDGFFGLDQADYFGCRSCRCDVGGALGQSCELRTGACMCRPNTQGSTCSE 844
Query: 155 CQPNHY 160
+HY
Sbjct: 845 PAQDHY 850
Score = 245 (91.3 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 54/166 (32%), Positives = 77/166 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD C+PG + P CE C+ G + P +
Sbjct: 676 SGQC-SCRPRVTGLRCDMCVPGAYN----FPY--CEAGSCHPAGLAPADRVPP---EAQA 725
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
C+C+ HV G +CD+C+ G + + EGC C+CDP G+L C GQC C+P
Sbjct: 726 PCTCRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCNCDPRGTLGGAAQCQLGNGQCFCKPH 785
Query: 147 VTGTRCELCQPNHYGFS-LD--GCKPCMCDPIGSNSLQCD-PSGQC 188
V G C C+ +G D GC+ C CD G+ C+ +G C
Sbjct: 786 VCGQTCAACKDGFFGLDQADYFGCRSCRCDVGGALGQSCELRTGAC 831
Score = 238 (88.8 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 48/127 (37%), Positives = 64/127 (50%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC C+ G + +P C+ GQC C+ HV+G +C +C G++ S C+ CDC
Sbjct: 1402 PCGCHEVGAM-----SPTCEPFGGQCPCRAHVIGRDCSRCATGYWGFPS---CRPCDCS- 1452
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ---C 182
R CD +TGQC+C P C +CQP +G L GC+ C C G L C
Sbjct: 1453 ----GRLCDELTGQCICPPRTIPPDCLVCQPQTFGCHPLVGCEECNCSGPGVQELMDPTC 1508
Query: 183 DP-SGQC 188
D SGQC
Sbjct: 1509 DADSGQC 1515
Score = 223 (83.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 60/173 (34%), Positives = 77/173 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C+ C N G C C PGY+ D L G C PCQC+ G + C +G C
Sbjct: 1791 CM-CPANYLGDSCQECAPGYYRDVKGLFLGRCIPCQCH--GHSDR------CLPGSGVCI 1841
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEG---CKSCDCD---PVGSLNRTCDPITG--QCLCR 144
C+ + G +C++C+ G S + C SC C P + C G QCLC+
Sbjct: 1842 GCQHNTEGDHCERCQAGFVRTGSEDPAAPCISCPCPLAVPSNNFATGCILRGGRTQCLCK 1901
Query: 145 PGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGS-NSL--QCDP-SGQCPG 190
PG G CE C P +G L C+PC C G N L CDP +G C G
Sbjct: 1902 PGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMLFSDCDPLTGTCRG 1954
Score = 215 (80.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 48/129 (37%), Positives = 62/129 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C G +CD C G+FG +G C PC C P +E C +G
Sbjct: 1998 SGHCL-CKAGVTGLRCDRCQEGHFGFEGC--EG-CRPCACG-PAAESSE-----CHPQSG 2047
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P G C +C GH+ + +GC+ C C G CD TG+C C PG+ G
Sbjct: 2048 QCHCRPGTGGPQCRECAPGHWGLPE-QGCRRCQCQ--GG---HCDLHTGRCTCPPGLGGE 2101
Query: 151 RCELCQPNH 159
RCE C H
Sbjct: 2102 RCETCSHQH 2110
Score = 203 (76.5 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 54/156 (34%), Positives = 64/156 (41%)
Query: 43 GPQCDTCLPGYFGDAL--ALP--KG--DCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
G C C GY G P G DC PC C G+L CD +GQCSC+P
Sbjct: 630 GGLC-RCCSGYAGSTCQECSPGFHGFPDCAPCHCSPEGSLHA-----ACDPHSGQCSCRP 683
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVG--SLNRTCDPITGQCLCRPGVTGTRCEL 154
V G CD C G YN C++ C P G +R C CR V G C+
Sbjct: 684 RVTGLRCDMCVPGAYNF---PYCEAGSCHPAGLAPADRVPPEAQAPCTCRAHVEGPSCDR 740
Query: 155 CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
C+P +G S P +P G CDP G G
Sbjct: 741 CKPGFWGLS-----PS--NPEGCTRCNCDPRGTLGG 769
Score = 195 (73.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 42/113 (37%), Positives = 57/113 (50%)
Query: 16 CVGPP-SDILKSVAGT-TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C GP +++ +G C KC N G +CDTC PG+ G P C PC C+
Sbjct: 1495 CSGPGVQELMDPTCDADSGQC-KCRPNVAGRRCDTCAPGFHG----FPS--CRPCDCHEA 1547
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDC 124
G+ CD LTGQC CK +V G CDQC +G +++ + +GC C C
Sbjct: 1548 GSAPG-----TCDPLTGQCYCKENVQGPRCDQCRLGTFSLDAANPKGCTRCFC 1595
Score = 160 (61.4 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 38/126 (30%), Positives = 54/126 (42%)
Query: 70 CYIPGTLETETFTPVCDQLT---GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCK 120
CY ++ + DQ+ G C C+ H G NC+QC G Y + S C+
Sbjct: 350 CYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSPDHPLDSPHACR 409
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
C+C+ + TC+ +TG+C CRP TG RC+ C F C P
Sbjct: 410 RCNCES-DFTDGTCEDLTGRCYCRPNFTGARCDACAEGFTDFP--HCYPVPSSSHNDTGE 466
Query: 181 QCDPSG 186
Q P+G
Sbjct: 467 QVLPAG 472
Score = 150 (57.9 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM 171
++ G + C C VG+++ TC+P GQC CR V G C C ++GF C+PC
Sbjct: 1393 SLFYNNGARPCGCHEVGAMSPTCEPFGGQCPCRAHVIGRDCSRCATGYWGFP--SCRPCD 1450
Query: 172 CDPIGSNSLQCDP-SGQC 188
C S L CD +GQC
Sbjct: 1451 C----SGRL-CDELTGQC 1463
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/99 (36%), Positives = 46/99 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C TGGPQC C PG++G LP+ C CQC G CD TG
Sbjct: 2046 SGQC-HCRPGTGGPQCRECAPGHWG----LPEQGCRRCQCQ-GGH---------CDLHTG 2090
Query: 91 QCSCKPHVVGTNCDQCEVGHYNII----SGEG--CKSCD 123
+C+C P + G C+ C H + G G C+ CD
Sbjct: 2091 RCTCPPGLGGERCETCSHQHQVPVPGGPGGHGVHCEVCD 2129
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 47/165 (28%), Positives = 62/165 (37%)
Query: 37 CIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT--- 89
C +NT G CD C PG+ + A +C+ C CY G + P D+
Sbjct: 306 CQHNTCGGSCDRCCPGFNQQPWRPATTDSANECQSCNCY--GHAHDCYYDPEVDRRNASQ 363
Query: 90 ---------GQC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
G C C+ H G NC+QC G Y S + D P C+
Sbjct: 364 NQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYR--SPD--HPLD-SPHACRRCNCESDFT 418
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM-----CDPIGSNS 179
C +TG RC C+PN G D C C P+ S+S
Sbjct: 419 DGTCED-LTG-RC-YCRPNFTGARCDACAEGFTDFPHCYPVPSSS 460
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 357 (130.7 bits), Expect = 8.5e-31, P = 8.5e-31
Identities = 65/159 (40%), Positives = 93/159 (58%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C T G +C+ C GYFGDA+ +C+PC C++ +L +E+ C TG
Sbjct: 846 SGSCRICKPGTAGRRCELCADGYFGDAVEAK--NCQPCGCHVNSSL-SES----CHARTG 898
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP+V G CD+C+ + + SG GC C C+ GS + C+ +GQC C+PGVTG
Sbjct: 899 QCECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGSKSFDCEE-SGQCWCQPGVTGK 957
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N CDP +GQC
Sbjct: 958 KCDRCAHGYFNFQEGGCTACDCSHLGNN---CDPKTGQC 993
Score = 320 (117.7 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 63/170 (37%), Positives = 92/170 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CL C +TGGP C+ CLPG++GD DC PC C P ++ + F+P C G
Sbjct: 733 TGECLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCAC--PLSIPSNNFSPTCHLERG 790
Query: 91 ---QC-SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC-DPVG-SLNRTCDPITGQC- 141
C +C G CD+C G++ + G C+ C C D + S+ +CD ++G C
Sbjct: 791 LGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCR 850
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCDP-SGQC 188
+C+PG G RCELC ++G +++ C+PC C S S C +GQC
Sbjct: 851 ICKPGTAGRRCELCADGYFGDAVEAKNCQPCGCHVNSSLSESCHARTGQC 900
Score = 272 (100.8 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 54/136 (39%), Positives = 70/136 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
T C C ++T G C+ C GY+G LP DC+ C C P + F+P C L G
Sbjct: 1396 TSKCQNCQHHTAGDFCERCALGYYGIVRGLPN-DCQQCAC--PLISSSNNFSPSC-VLEG 1451
Query: 91 ----QCSCKPH-VVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ P G C++C G+ G C+ C+CDP GSL CDP TG C C
Sbjct: 1452 LDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSLPLPCDPATGLCTC 1511
Query: 144 RPGVTGTRCELCQPNH 159
RPG TG +C+ CQP H
Sbjct: 1512 RPGATGPKCDGCQPGH 1527
Score = 271 (100.5 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 59/157 (37%), Positives = 76/157 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD C GYF +G C C C G CD TG
Sbjct: 945 SGQCW-CQPGVTGKKCDRCAHGYFN----FQEGGCTACDCSHLGNN--------CDPKTG 991
Query: 91 QCSCKPHVVGTNCDQCEV---GHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
QC C P+ VG C +C GH +II+G CK+C+C VGSL+ C+ TGQC C P
Sbjct: 992 QCICPPNTVGEKCSKCSPNTWGH-SIITG--CKACNCSTVGSLDFQCNINTGQCSCHPKF 1048
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
+G +C C H+ + C PC C G++ CDP
Sbjct: 1049 SGAKCTECNQGHWNYP--HCSPCECFLPGTDDRTCDP 1083
Score = 257 (95.5 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 57/164 (34%), Positives = 79/164 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C C P +G ++ C+ C C G+L+ + C+ TG
Sbjct: 990 TGQCI-CPPNTVGEKCSKCSPNTWGHSIIT---GCKACNCSTVGSLDFQ-----CNINTG 1040
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT---------GQC 141
QCSC P G C +C GH+N C C+C G+ +RTCDP T GQC
Sbjct: 1041 QCSCHPKFSGAKCTECNQGHWNY---PHCSPCECFLPGTDDRTCDPETKKCSCVDQTGQC 1097
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQC 182
C+ V G C+ C+P ++G GC C C G+ + QC
Sbjct: 1098 TCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQCYC--FGATT-QC 1138
Score = 237 (88.5 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 69/203 (33%), Positives = 94/203 (46%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P+D +S+A C +C G C++C P + + G CEPCQC+ G E+
Sbjct: 675 PTD--RSIAAAVEVC-QCPPGYSGSSCESCWPRHRRVNGTVFGGICEPCQCF--GHAES- 728
Query: 80 TFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIIS---GEGCKSCDCD---PVGSLNR 132
CD LTG+C +CK H G +C+QC G Y S E C C C P + +
Sbjct: 729 -----CDDLTGECLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCACPLSIPSNNFSP 783
Query: 133 TCDPITG---QC-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSL--QCD 183
TC G C C G TG RC+ C ++G S+ G C+PC C+ S+ CD
Sbjct: 784 TCHLERGLGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCD 843
Query: 184 P-SGQC----PGVFMNRAEMSSD 201
SG C PG R E+ +D
Sbjct: 844 SLSGSCRICKPGTAGRRCELCAD 866
Score = 229 (85.7 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 66/203 (32%), Positives = 92/203 (45%)
Query: 10 VMDILLCVGPPSDILKSV--AGTTGDCLKCIYNTGGPQCDTCLPGYF------GDALALP 61
+ ++ L VG P + A C +C G C+ C PG++ G A A P
Sbjct: 1317 ISEVSLAVGQPGRGTAAAPPARLIERC-ECPAGHSGLSCEACGPGFYRLPSEPGSAAARP 1375
Query: 62 K-GDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG--E 117
G C PCQC+ +L CD T +C +C+ H G C++C +G+Y I+ G
Sbjct: 1376 ALGPCVPCQCHGHSSL--------CDPETSKCQNCQHHTAGDFCERCALGYYGIVRGLPN 1427
Query: 118 GCKSCDCDPVGSLNR---TCDPITG----QCL-CRPGVTGTRCELCQPNHYGF--SLDG- 166
C+ C C + S N +C + G +C C G G CE C + G S G
Sbjct: 1428 DCQQCACPLISSSNNFSPSC-VLEGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGT 1486
Query: 167 CKPCMCDPIGSNSLQCDPS-GQC 188
C+ C CDP GS L CDP+ G C
Sbjct: 1487 CQECECDPQGSLPLPCDPATGLC 1509
Score = 227 (85.0 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 54/164 (32%), Positives = 73/164 (44%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETF 81
K + G G C+ C NT G C+TC+ G+F G + + P+ C+PC C G+L
Sbjct: 334 KYIGG--GVCINCTQNTAGINCETCIDGFFRPKGVSPSYPR-PCQPCHCDPVGSLNEVC- 389
Query: 82 TPVCDQ-------LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
V D+ G C CKP G +CD+C G+ CK C+C GS N
Sbjct: 390 --VKDEKRARRGLAPGSCHCKPGFRGVSCDRCARGYTGY---PDCKPCNCSGAGSTNE-- 442
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPI 175
DP G C C+ V G C C+ + D GC C C +
Sbjct: 443 DPCFGPCNCKENVEGGDCGRCKAGFFNLQEDNHKGCDECFCSGV 486
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/124 (33%), Positives = 59/124 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT----LETETFTPVCD 86
TG C C G +C C G++ P C PC+C++PGT + ET C
Sbjct: 1039 TGQC-SCHPKFSGAKCTECNQGHWN----YPH--CSPCECFLPGTDDRTCDPETKKCSCV 1091
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR 144
TGQC+CK +V G +CD+C G++ + + GC C C G+ + C G L R
Sbjct: 1092 DQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQCYC--FGATTQ-CSEAKG--LIR 1146
Query: 145 PGVT 148
VT
Sbjct: 1147 TWVT 1150
Score = 163 (62.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/115 (35%), Positives = 52/115 (45%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNI--ISGE---GCKSCDCDPVGSLNRTC--DP----- 136
G C +C + G NC+ C G + +S C+ C CDPVGSLN C D
Sbjct: 339 GVCINCTQNTAGINCETCIDGFFRPKGVSPSYPRPCQPCHCDPVGSLNEVCVKDEKRARR 398
Query: 137 --ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C C+PG G C+ C + G+ CKPC C G+ S DP G C
Sbjct: 399 GLAPGSCHCKPGFRGVSCDRCARGYTGYP--DCKPCNCS--GAGSTNEDPCFGPC 449
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 357 (130.7 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 65/159 (40%), Positives = 93/159 (58%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C T G +C+ C GYFGDA+ +C+PC C++ +L +E+ C TG
Sbjct: 869 SGSCRICKPGTAGRRCELCADGYFGDAVEAK--NCQPCGCHVNSSL-SES----CHARTG 921
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP+V G CD+C+ + + SG GC C C+ GS + C+ +GQC C+PGVTG
Sbjct: 922 QCECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGSKSFDCEE-SGQCWCQPGVTGK 980
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N CDP +GQC
Sbjct: 981 KCDRCAHGYFNFQEGGCTACDCSHLGNN---CDPKTGQC 1016
Score = 320 (117.7 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 63/170 (37%), Positives = 92/170 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+CL C +TGGP C+ CLPG++GD DC PC C P ++ + F+P C G
Sbjct: 756 TGECLNCKDHTGGPHCNQCLPGFYGDPSKGTSEDCLPCAC--PLSIPSNNFSPTCHLERG 813
Query: 91 ---QC-SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC-DPVG-SLNRTCDPITGQC- 141
C +C G CD+C G++ + G C+ C C D + S+ +CD ++G C
Sbjct: 814 LGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCR 873
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCDP-SGQC 188
+C+PG G RCELC ++G +++ C+PC C S S C +GQC
Sbjct: 874 ICKPGTAGRRCELCADGYFGDAVEAKNCQPCGCHVNSSLSESCHARTGQC 923
Score = 272 (100.8 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 54/136 (39%), Positives = 70/136 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
T C C ++T G C+ C GY+G LP DC+ C C P + F+P C L G
Sbjct: 1419 TSKCQNCQHHTAGDFCERCALGYYGIVRGLPN-DCQQCAC--PLISSSNNFSPSC-VLEG 1474
Query: 91 ----QCSCKPH-VVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ P G C++C G+ G C+ C+CDP GSL CDP TG C C
Sbjct: 1475 LDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGTCQECECDPQGSLPLPCDPATGLCTC 1534
Query: 144 RPGVTGTRCELCQPNH 159
RPG TG +C+ CQP H
Sbjct: 1535 RPGATGPKCDGCQPGH 1550
Score = 271 (100.5 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 59/157 (37%), Positives = 76/157 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD C GYF +G C C C G CD TG
Sbjct: 968 SGQCW-CQPGVTGKKCDRCAHGYFN----FQEGGCTACDCSHLGNN--------CDPKTG 1014
Query: 91 QCSCKPHVVGTNCDQCEV---GHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
QC C P+ VG C +C GH +II+G CK+C+C VGSL+ C+ TGQC C P
Sbjct: 1015 QCICPPNTVGEKCSKCSPNTWGH-SIITG--CKACNCSTVGSLDFQCNINTGQCSCHPKF 1071
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
+G +C C H+ + C PC C G++ CDP
Sbjct: 1072 SGAKCTECNQGHWNYP--HCSPCECFLPGTDDRTCDP 1106
Score = 257 (95.5 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 57/164 (34%), Positives = 79/164 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C C P +G ++ C+ C C G+L+ + C+ TG
Sbjct: 1013 TGQCI-CPPNTVGEKCSKCSPNTWGHSIIT---GCKACNCSTVGSLDFQ-----CNINTG 1063
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT---------GQC 141
QCSC P G C +C GH+N C C+C G+ +RTCDP T GQC
Sbjct: 1064 QCSCHPKFSGAKCTECNQGHWNY---PHCSPCECFLPGTDDRTCDPETKKCSCVDQTGQC 1120
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQC 182
C+ V G C+ C+P ++G GC C C G+ + QC
Sbjct: 1121 TCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQCYC--FGATT-QC 1161
Score = 229 (85.7 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 66/203 (32%), Positives = 92/203 (45%)
Query: 10 VMDILLCVGPPSDILKSV--AGTTGDCLKCIYNTGGPQCDTCLPGYF------GDALALP 61
+ ++ L VG P + A C +C G C+ C PG++ G A A P
Sbjct: 1340 ISEVSLAVGQPGRGTAAAPPARLIERC-ECPAGHSGLSCEACGPGFYRLPSEPGSAAARP 1398
Query: 62 K-GDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG--E 117
G C PCQC+ +L CD T +C +C+ H G C++C +G+Y I+ G
Sbjct: 1399 ALGPCVPCQCHGHSSL--------CDPETSKCQNCQHHTAGDFCERCALGYYGIVRGLPN 1450
Query: 118 GCKSCDCDPVGSLNR---TCDPITG----QCL-CRPGVTGTRCELCQPNHYGF--SLDG- 166
C+ C C + S N +C + G +C C G G CE C + G S G
Sbjct: 1451 DCQQCACPLISSSNNFSPSC-VLEGLDDYRCTACPRGYEGQYCERCSAGYTGSPRSPGGT 1509
Query: 167 CKPCMCDPIGSNSLQCDPS-GQC 188
C+ C CDP GS L CDP+ G C
Sbjct: 1510 CQECECDPQGSLPLPCDPATGLC 1532
Score = 227 (85.0 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 54/164 (32%), Positives = 73/164 (44%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETF 81
K + G G C+ C NT G C+TC+ G+F G + + P+ C+PC C G+L
Sbjct: 339 KYIGG--GVCINCTQNTAGINCETCIDGFFRPKGVSPSYPR-PCQPCHCDPVGSLNEVC- 394
Query: 82 TPVCDQ-------LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
V D+ G C CKP G +CD+C G+ CK C+C GS N
Sbjct: 395 --VKDEKRARRGLAPGSCHCKPGFRGVSCDRCARGYTGY---PDCKPCNCSGAGSTNE-- 447
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPI 175
DP G C C+ V G C C+ + D GC C C +
Sbjct: 448 DPCFGPCNCKENVEGGDCGRCKAGFFNLQEDNHKGCDECFCSGV 491
Score = 212 (79.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 59/160 (36%), Positives = 76/160 (47%)
Query: 63 GDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIIS---GEG 118
G CEPCQC+ G E+ CD LTG+C +CK H G +C+QC G Y S E
Sbjct: 738 GICEPCQCF--GHAES------CDDLTGECLNCKDHTGGPHCNQCLPGFYGDPSKGTSED 789
Query: 119 CKSCDCD---PVGSLNRTCDPITG---QC-LCRPGVTGTRCELCQPNHYGF-SLDG--CK 168
C C C P + + TC G C C G TG RC+ C ++G S+ G C+
Sbjct: 790 CLPCACPLSIPSNNFSPTCHLERGLGLMCDACPAGYTGPRCDRCAEGYFGQPSVPGGSCQ 849
Query: 169 PCMCDPIGSNSL--QCDP-SGQC----PGVFMNRAEMSSD 201
PC C+ S+ CD SG C PG R E+ +D
Sbjct: 850 PCQCNDNLDFSIPGSCDSLSGSCRICKPGTAGRRCELCAD 889
Score = 166 (63.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 42/124 (33%), Positives = 59/124 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT----LETETFTPVCD 86
TG C C G +C C G++ P C PC+C++PGT + ET C
Sbjct: 1062 TGQC-SCHPKFSGAKCTECNQGHWN----YPH--CSPCECFLPGTDDRTCDPETKKCSCV 1114
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR 144
TGQC+CK +V G +CD+C G++ + + GC C C G+ + C G L R
Sbjct: 1115 DQTGQCTCKVNVEGVHCDRCRPGNFGLDAKNPLGCSQCYC--FGATTQ-CSEAKG--LIR 1169
Query: 145 PGVT 148
VT
Sbjct: 1170 TWVT 1173
Score = 163 (62.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/115 (35%), Positives = 52/115 (45%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNI--ISGE---GCKSCDCDPVGSLNRTC--DP----- 136
G C +C + G NC+ C G + +S C+ C CDPVGSLN C D
Sbjct: 344 GVCINCTQNTAGINCETCIDGFFRPKGVSPSYPRPCQPCHCDPVGSLNEVCVKDEKRARR 403
Query: 137 --ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C C+PG G C+ C + G+ CKPC C G+ S DP G C
Sbjct: 404 GLAPGSCHCKPGFRGVSCDRCARGYTGYP--DCKPCNCS--GAGSTNEDPCFGPC 454
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 357 (130.7 bits), Expect = 8.6e-31, P = 8.6e-31
Identities = 64/159 (40%), Positives = 92/159 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C T G C+ C GYFGDA+ +C+PC+C G+ F+ VC TG
Sbjct: 883 SGSCLICKPGTTGRYCELCADGYFGDAVDAK--NCQPCRCNAGGS-----FSEVCHSQTG 935
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+ +V G CD+C+ G + + S GC C+C+ GS + C+ +GQC C+PGVTG
Sbjct: 936 QCECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEE-SGQCWCQPGVTGK 994
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N CDP +G+C
Sbjct: 995 KCDRCAHGYFNFQEGGCTACECSHLGNN---CDPKTGRC 1030
Score = 335 (123.0 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 67/176 (38%), Positives = 97/176 (55%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
+S TG+CL C +TGGP CD CLPG++G+ DC+PC C P + + F+P
Sbjct: 764 ESCDDVTGECLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCAC--PLNIPSNNFSPT 821
Query: 85 C--DQLTGQ-CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC-DPVG-SLNRTCDP 136
C D+ G C C G C++C G++ + G C+ C C D + S+ +CD
Sbjct: 822 CHLDRSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 881
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQC-DPSGQC 188
++G CL C+PG TG CELC ++G ++D C+PC C+ GS S C +GQC
Sbjct: 882 LSGSCLICKPGTTGRYCELCADGYFGDAVDAKNCQPCRCNAGGSFSEVCHSQTGQC 937
Score = 253 (94.1 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 51/135 (37%), Positives = 70/135 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
T C C ++T G C+ C GY+G LP DC+ C C P + F+P C + L
Sbjct: 1433 TSICQNCQHHTAGDFCERCALGYYGIVKGLPN-DCQQCAC--PLISSSNNFSPSCVAEGL 1489
Query: 89 TG-QCSCKPH-VVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLCR 144
+C+ P G C++C G+ G C+ C+CDP GSL CDP+TG C CR
Sbjct: 1490 DDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTCR 1549
Query: 145 PGVTGTRCELCQPNH 159
PG TG +C+ C+ H
Sbjct: 1550 PGATGRKCDGCKHWH 1564
Score = 249 (92.7 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 51/153 (33%), Positives = 71/153 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD C GYF +G C C+C G CD TG
Sbjct: 982 SGQCW-CQPGVTGKKCDRCAHGYFN----FQEGGCTACECSHLGNN--------CDPKTG 1028
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C P+ +G C +C + GCK+C+C VGSL+ C+ TGQC C P +G
Sbjct: 1029 RCICPPNTIGEKCSKCAPNTWGHSITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGA 1088
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
+C C H+ + C C C G+++ CD
Sbjct: 1089 KCTECSRGHWNYPR--CNLCDCFLPGTDATTCD 1119
Score = 236 (88.1 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 55/164 (33%), Positives = 75/164 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C C P +G ++ C+ C C G+L+ + C+ TG
Sbjct: 1027 TGRCI-CPPNTIGEKCSKCAPNTWGHSITT---GCKACNCSTVGSLDFQ-----CNVNTG 1077
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT---------GQC 141
QC+C P G C +C GH+N C CDC G+ TCD T GQC
Sbjct: 1078 QCNCHPKFSGAKCTECSRGHWNY---PRCNLCDCFLPGTDATTCDSETKKCSCSDQTGQC 1134
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQC 182
C+ V G C+ C+P +G GC C C G+ + QC
Sbjct: 1135 TCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC--FGTTT-QC 1175
Score = 225 (84.3 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 54/167 (32%), Positives = 73/167 (43%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETF 81
K + G G C+ C NT G C+TC G+F G + P+ C+PC C G+L
Sbjct: 371 KYIGG--GVCINCTQNTAGINCETCTDGFFRPKGVSPNYPR-PCQPCHCDPIGSLNEVCV 427
Query: 82 TPVCDQ----LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
G C CK G +CD+C G+ CK+C+C +GS N DP
Sbjct: 428 KDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYTGY---PDCKACNCSGLGSKNE--DPC 482
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQ 181
G C+C+ V G C C+ + D GC C C + SN Q
Sbjct: 483 FGPCICKENVEGGDCSRCKSGFFNLQEDNWKGCDECFCSGV-SNRCQ 528
Score = 224 (83.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 69/218 (31%), Positives = 99/218 (45%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD 64
+ +S +++ V P+D S+A C +C G C++C P + + G
Sbjct: 697 IFRLSSVNLESAVSYPTD--GSIAAAVEVC-QCPPGYTGSSCESCWPRHRRVNGTIFGGI 753
Query: 65 CEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIIS---GEGCK 120
CEPCQC+ G E+ CD +TG+C +CK H G CD+C G Y + E C+
Sbjct: 754 CEPCQCF--GHAES------CDDVTGECLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQ 805
Query: 121 SCDCD---PVGSLNRTC--DPITGQCL--CRPGVTGTRCELCQPNHYGF-SLDG--CKPC 170
C C P + + TC D G C G TG RCE C ++G S+ G C+PC
Sbjct: 806 PCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPC 865
Query: 171 MCDPIGSNSL--QCDP-SGQC----PGVFMNRAEMSSD 201
C+ S+ CD SG C PG E+ +D
Sbjct: 866 QCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCAD 903
Score = 220 (82.5 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 59/191 (30%), Positives = 86/191 (45%)
Query: 19 PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYF------GDALALPK-GDCEPCQCY 71
PP+D+++ C C G C+ CLPG++ G P G C PCQC
Sbjct: 1372 PPADLIEK-------C-DCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQC- 1422
Query: 72 IPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVG 128
+ +CD T C +C+ H G C++C +G+Y I+ G C+ C C +
Sbjct: 1423 -------NGHSSLCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLIS 1475
Query: 129 SLNR---TC--DPITG-QCL-CRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSN 178
S N +C + + +C C G G CE C P + G + C+ C CDP GS
Sbjct: 1476 SSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSPGNPGGSCQECECDPYGSL 1535
Query: 179 SLQCDP-SGQC 188
+ CDP +G C
Sbjct: 1536 PVPCDPVTGFC 1546
Score = 163 (62.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 42/124 (33%), Positives = 59/124 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT----LETETFTPVCD 86
TG C C G +C C G++ P+ C C C++PGT ++ET C
Sbjct: 1076 TGQC-NCHPKFSGAKCTECSRGHWN----YPR--CNLCDCFLPGTDATTCDSETKKCSCS 1128
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR 144
TGQC+CK +V G +CD+C G + + + GC SC C G+ + C G L R
Sbjct: 1129 DQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYC--FGTTTQ-CSEAKG--LIR 1183
Query: 145 PGVT 148
VT
Sbjct: 1184 TWVT 1187
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 353 (129.3 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 70/168 (41%), Positives = 87/168 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETET-FTPVC--DQ 87
TG CL+C+++T GP C C PG+ G A + C C C + GT T +C D
Sbjct: 1007 TGQCLRCLHHTEGPHCGHCKPGFHGQAA---RQSCHRCTCNLLGTDPQRCPSTDLCHCDP 1063
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC C PHV G +CD+C +N SG GC+ C C P + TC+ TGQC C G
Sbjct: 1064 STGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHPSRARGPTCNEFTGQCHCHAGF 1123
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGV 191
G C CQ H+G C+ C CDP G + QC S G C PGV
Sbjct: 1124 GGRTCSECQELHWGDPGLQCRACDCDPRGIDKPQCHRSTGHCSCRPGV 1171
Score = 320 (117.7 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 67/177 (37%), Positives = 94/177 (53%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLE---TET 80
+V+G G C C +NT G C+ C P ++ D + C PC C G+ + ++
Sbjct: 371 NVSG--GVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAACRPCDCDPMGSQDGGRCDS 428
Query: 81 FT-PVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTCD 135
PV ++GQC CK HVVGT C QC G + + + GC+ C C+ G++ CD
Sbjct: 429 HDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASNPRGCQRCQCNSRGTVPGGTPCD 488
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDPS-GQCP 189
+G C C+ VTG C+ C P H+G S D GC+PC CD G+ QCD + GQCP
Sbjct: 489 SSSGTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQCP 545
Score = 289 (106.8 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 58/148 (39%), Positives = 79/148 (53%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC 103
P + C+P A +L PCQC G+L +E C+ GQC CKP VVG C
Sbjct: 763 PLSEACVPLLIS-ASSLVYNGALPCQCDPQGSLSSE-----CNPHGGQCRCKPGVVGRRC 816
Query: 104 DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS 163
D C G+Y GC++C C P G+L+ C+ +GQCLCR G G RC+ CQ +GF
Sbjct: 817 DACATGYYGF-GPAGCQACQCSPDGALSALCEGTSGQCLCRTGAFGLRCDHCQRGQWGFP 875
Query: 164 LDGCKPCMCDPIGSNSLQCDP-SGQCPG 190
C+PC+C+ + +CD +G C G
Sbjct: 876 --NCRPCVCN---GRADECDAHTGACLG 898
Score = 287 (106.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 57/136 (41%), Positives = 77/136 (56%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C + G +C C G+FG + + P+G C+ CQC GT+ T P CD +G
Sbjct: 438 SGQC-RCKEHVVGTRCQQCRDGFFGLSASNPRG-CQRCQCNSRGTVPGGT--P-CDSSSG 492
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK V G CD+C GH+ + GC+ CDCD G+L+ CD TGQC CRP + G
Sbjct: 493 TCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEATGQCPCRPHMIG 552
Query: 150 TRCELCQPNHYGFSLD 165
RCE QP ++ LD
Sbjct: 553 RRCEQVQPGYFRPFLD 568
Score = 258 (95.9 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 54/151 (35%), Positives = 71/151 (47%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
PS L +TG C C+ + G CD C P ++ +G C+PC C+ P
Sbjct: 1054 PSTDLCHCDPSTGQC-PCLPHVQGLSCDRCAPNFWN--FTSGRG-CQPCACH-PSRARG- 1107
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
P C++ TGQC C G C +C+ H+ G C++CDCDP G C TG
Sbjct: 1108 ---PTCNEFTGQCHCHAGFGGRTCSECQELHWGD-PGLQCRACDCDPRGIDKPQCHRSTG 1163
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPC 170
C CRPGV+G RC+ C G C PC
Sbjct: 1164 HCSCRPGVSGVRCDQCARGFSGV-FPACHPC 1193
Score = 250 (93.1 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 60/172 (34%), Positives = 82/172 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYI-PGTLETETFTPVC--D 86
TG CL C TGG C+ C+ G+ GD LP G C PC C PG+ F C D
Sbjct: 893 TGACLGCRDYTGGEHCERCIAGFHGDP-RLPYGGQCRPCPCPEGPGS--QRHFATSCHRD 949
Query: 87 QLTGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT----CDPIT 138
+ Q C C+ G C+ C GH+ S G C+ C+C G+++ T CDP T
Sbjct: 950 GYSQQIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLCECS--GNIDPTDPGACDPHT 1007
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
GQCL C G C C+P +G + C C C+ +G++ +C + C
Sbjct: 1008 GQCLRCLHHTEGPHCGHCKPGFHGQAARQSCHRCTCNLLGTDPQRCPSTDLC 1059
Score = 219 (82.2 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 57/171 (33%), Positives = 72/171 (42%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L S G +C G +CD C GY+G P G C+ CQC
Sbjct: 784 LPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFG---PAG-CQACQCSPD 839
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G L +C+ +GQC C+ G CD C+ G + C+ C C+ G +
Sbjct: 840 GALSA-----LCEGTSGQCLCRTGAFGLRCDHCQRGQWGF---PNCRPCVCN--GRADE- 888
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMCDPIGSNS 179
CD TG CL CR G CE C +G G C+PC C P G S
Sbjct: 889 CDAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPC-PEGPGS 938
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 44/179 (24%), Positives = 69/179 (38%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGT---LETETFTP 83
G C+ C +NT G C+ C ++ D P D C C+C + +
Sbjct: 311 GACI-CKHNTRGLNCEQC-QDFYQDLPWHPAEDGHTHACRKCECNGHSHSCHFDMAVYLA 368
Query: 84 VCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNR-TCDP 136
+ G C C+ + G +C+ C Y ++ C+ CDCDP+GS + CD
Sbjct: 369 SGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDMRDPAACRPCDCDPMGSQDGGRCDS 428
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP-----CMCDPIGSNSLQCDPSGQCPG 190
L G+ +C C+ + G C+ +P G QC+ G PG
Sbjct: 429 HDDPVL---GLVSGQCR-CKEHVVGTRCQQCRDGFFGLSASNPRGCQRCQCNSRGTVPG 483
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 355 (130.0 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 65/159 (40%), Positives = 91/159 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C T G C+ C GYFGDA+ +C+PC C G+ F+ VC TG
Sbjct: 846 SGSCLICKPGTTGRYCELCADGYFGDAVDAK--NCQPCHCNANGS-----FSEVCHAQTG 898
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP+V G CD+C+ + + S GC C+C+ GS + C+ +GQC C+PGVTG
Sbjct: 899 QCECKPNVQGRRCDECKPETFGLQSARGCIPCNCNSFGSKSFDCEE-SGQCWCQPGVTGK 957
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N CDP +G+C
Sbjct: 958 KCDRCAHGYFNFQEGGCTACDCSHLGNN---CDPKTGRC 993
Score = 331 (121.6 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 68/176 (38%), Positives = 96/176 (54%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
+S TTG+CL C +T GP CD CLPG++GD DC+PC C P + F+P
Sbjct: 727 ESCDDTTGECLNCKDHTDGPYCDKCLPGFYGDPTKGTSDDCQPCAC--PLNSPSNNFSPT 784
Query: 85 C--DQLTGQ-CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC-DPVG-SLNRTCDP 136
C D+ G C C G C++C G++ + G C+ C C D + S+ +CD
Sbjct: 785 CHMDRSLGLICDECPVGYSGQRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDS 844
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCDP-SGQC 188
++G CL C+PG TG CELC ++G ++D C+PC C+ GS S C +GQC
Sbjct: 845 LSGSCLICKPGTTGRYCELCADGYFGDAVDAKNCQPCHCNANGSFSEVCHAQTGQC 900
Score = 255 (94.8 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 51/135 (37%), Positives = 70/135 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
T C C ++T G C+ C GY+G LP DC+ C C P + F+P C + L
Sbjct: 1396 TSICQNCQHHTAGDFCERCALGYYGIVKGLPN-DCQQCAC--PLISSSNNFSPSCIMEGL 1452
Query: 89 TG-QCSCKPH-VVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLCR 144
+C+ P G C++C G+ S G C+ C+CDP GSL CDP+ G C CR
Sbjct: 1453 DDYRCTACPRGYEGKYCERCAPGYAGSPSSPGGSCQECECDPHGSLPVPCDPVMGICTCR 1512
Query: 145 PGVTGTRCELCQPNH 159
PG TG +C+ C+ H
Sbjct: 1513 PGATGPKCDGCEQGH 1527
Score = 252 (93.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 52/153 (33%), Positives = 69/153 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD C GYF +G C C C G CD TG
Sbjct: 945 SGQCW-CQPGVTGKKCDRCAHGYFN----FQEGGCTACDCSHLGNN--------CDPKTG 991
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C P+ +G C +C + GCK+C+C VGSL+ CD GQC C P +G
Sbjct: 992 RCICPPNTIGEKCSKCAPRTWGHSITTGCKACNCSSVGSLDFQCDLNMGQCKCHPKFSGA 1051
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
+C C H+ + C PC C G++ CD
Sbjct: 1052 KCTECTRGHWNYP--HCSPCDCFLSGTDDSTCD 1082
Score = 234 (87.4 bits), Expect = 9.8e-18, P = 9.8e-18
Identities = 55/164 (33%), Positives = 74/164 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C C P +G ++ C+ C C G+L+ + CD G
Sbjct: 990 TGRCI-CPPNTIGEKCSKCAPRTWGHSITT---GCKACNCSSVGSLDFQ-----CDLNMG 1040
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD---------PITGQC 141
QC C P G C +C GH+N C CDC G+ + TCD TGQC
Sbjct: 1041 QCKCHPKFSGAKCTECTRGHWNY---PHCSPCDCFLSGTDDSTCDLETKKCSCIDQTGQC 1097
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQC 182
C+ V G C+ C+P +G GC C C G+ + QC
Sbjct: 1098 TCKVNVEGIHCDRCRPGKFGLEAKNPLGCNSCYC--FGATT-QC 1138
Score = 230 (86.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 56/167 (33%), Positives = 73/167 (43%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETF 81
K + G G C+ C NT G C+TC+ G+F G + P+ C+PC C G+L
Sbjct: 334 KYIGG--GVCINCTRNTAGINCETCIDGFFRPKGVSPNYPR-PCQPCHCDPVGSLNEVCV 390
Query: 82 TPVCDQ----LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
G C CKP G +CD+C G+ I CK C+C GS N DP
Sbjct: 391 KDEKHARRGLAPGSCHCKPGFRGVSCDRCARGY---IGYPDCKPCNCSGAGSTNE--DPC 445
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQ 181
G C C+ V G C C+ + D GC C C + SN Q
Sbjct: 446 FGPCNCKENVEGGDCSRCKFGFFNLQEDNHKGCDECFCSGV-SNRCQ 491
Score = 216 (81.1 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 57/173 (32%), Positives = 77/173 (44%)
Query: 37 CIYNTGGPQCDTCLPGYF-------GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
C G C+TC PG++ G G C PCQC+ L CD T
Sbjct: 1345 CPPGYSGLSCETCTPGFYRLRSEPGGRTPGATLGTCVPCQCHGHSNL--------CDPET 1396
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNR---TC--DPITG-Q 140
C +C+ H G C++C +G+Y I+ G C+ C C + S N +C + + +
Sbjct: 1397 SICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLISSSNNFSPSCIMEGLDDYR 1456
Query: 141 CL-CRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSLQCDP-SGQC 188
C C G G CE C P + G S G C+ C CDP GS + CDP G C
Sbjct: 1457 CTACPRGYEGKYCERCAPGYAGSPSSPGGSCQECECDPHGSLPVPCDPVMGIC 1509
Score = 207 (77.9 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 63/193 (32%), Positives = 88/193 (45%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T + +C G C++C P + + G CEPCQC+ G E+ CD T
Sbjct: 682 TAVEVCQCPPGYTGSSCESCWPRHRRVNGTIFGGLCEPCQCF--GHAES------CDDTT 733
Query: 90 GQC-SCKPHVVGTNCDQCEVGHY-NIISG--EGCKSCDC---DPVGSLNRTC--DPITGQ 140
G+C +CK H G CD+C G Y + G + C+ C C P + + TC D G
Sbjct: 734 GECLNCKDHTDGPYCDKCLPGFYGDPTKGTSDDCQPCACPLNSPSNNFSPTCHMDRSLGL 793
Query: 141 -C-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSL--QCDP-SGQC---- 188
C C G +G RCE C ++G S+ G C+PC C+ S+ CD SG C
Sbjct: 794 ICDECPVGYSGQRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSGSCLICK 853
Query: 189 PGVFMNRAEMSSD 201
PG E+ +D
Sbjct: 854 PGTTGRYCELCAD 866
Score = 158 (60.7 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 42/123 (34%), Positives = 57/123 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT----LETETFTPVCDQ 87
G C KC G +C C G++ P C PC C++ GT + ET C
Sbjct: 1040 GQC-KCHPKFSGAKCTECTRGHWN----YPH--CSPCDCFLSGTDDSTCDLETKKCSCID 1092
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRP 145
TGQC+CK +V G +CD+C G + + + GC SC C G+ + C G L R
Sbjct: 1093 QTGQCTCKVNVEGIHCDRCRPGKFGLEAKNPLGCNSCYC--FGATTQ-CSEAKG--LIRT 1147
Query: 146 GVT 148
VT
Sbjct: 1148 WVT 1150
Score = 127 (49.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 41/127 (32%), Positives = 52/127 (40%)
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG----------CKSC 122
PG + T P L +C C P G +C+ C G Y + S G C C
Sbjct: 1327 PGRITAVT-PPA--HLIEKCDCPPGYSGLSCETCTPGFYRLRSEPGGRTPGATLGTCVPC 1383
Query: 123 DCDPVGSLNRTCDPITGQCL-CRPGVTGTRCELCQPNHYGF--SL-DGCKPCMCDPIGSN 178
C G N CDP T C C+ G CE C +YG L + C+ C C P+ S+
Sbjct: 1384 QCH--GHSN-LCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCAC-PLISS 1439
Query: 179 SLQCDPS 185
S PS
Sbjct: 1440 SNNFSPS 1446
Score = 57 (25.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
+C+ C P + G S + C P G L+ +P G+ PG
Sbjct: 1342 KCD-CPPGYSGLSCETCTP------GFYRLRSEPGGRTPG 1374
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 354 (129.7 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 64/158 (40%), Positives = 87/158 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CLKC+ NT G C+ C GY+GDA+ + C C+C++ G+L + VC TG
Sbjct: 848 TGQCLKCVGNTAGLHCEKCADGYYGDAVT--EKSCRACECHVNGSLSS-----VCHHETG 900
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK V+G CD+C G Y +++G GC C+C GS++ C+ GQC C PGV G
Sbjct: 901 ICDCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSISEDCNH-QGQCHCLPGVAGE 959
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+C+ C + GC PC C N+ D SGQC
Sbjct: 960 KCDRCAHGFHSLQKSGCTPCDCAHT-QNNCNAD-SGQC 995
Score = 304 (112.1 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 64/160 (40%), Positives = 85/160 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C + G +CD CL G++G L G C PC C G++ + C+ G
Sbjct: 899 TGIC-DCKSDVIGQKCDKCLNGFYGLLTGL--G-CIPCNCSQFGSISED-----CNH-QG 948
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P V G CD+C G +++ GC CDC C+ +GQC+C P G
Sbjct: 949 QCHCLPGVAGEKCDRCAHGFHSL-QKSGCTPCDC---AHTQNNCNADSGQCICPPHTRGP 1004
Query: 151 RCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQC 188
+C+LC+ NH+G S GCK C C GS+SLQCD +GQC
Sbjct: 1005 KCDLCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQC 1044
Score = 295 (108.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 63/173 (36%), Positives = 86/173 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T G C C +NT GP CD CLPG++G DC+PC C P + F+P C
Sbjct: 734 TQGVCFACQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCAC--PLSSAANNFSPTCQLSE 791
Query: 90 GQ---CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRT----CDPITG 139
G+ C C P G+ C++C G+Y ++ G+ C C+C+ G++N CD ITG
Sbjct: 792 GEGIVCDKCLPGYTGSRCERCANGYYGNPLVPGQSCVPCECN--GNVNPQEDGYCDTITG 849
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCD-PSGQC 188
QCL C G CE C +YG ++ C+ C C GS S C +G C
Sbjct: 850 QCLKCVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSVCHHETGIC 902
Score = 275 (101.9 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 63/180 (35%), Positives = 89/180 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C NT G C C PGY+G + DC C C P +F+P C L G
Sbjct: 1397 TGKCLNCRDNTVGDYCSACAPGYYGKVIG-SVNDCSLCAC--PRA-NPVSFSPTC-VLKG 1451
Query: 91 ----QC-SCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C +C P G C++C +G+Y + G C C C+P GS++ CD +TG+C C
Sbjct: 1452 VQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCNPSGSVHVNCDRVTGKCPC 1511
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSDDV 203
+ GVTG CE C+P H L+ + C+ CD + C GV +N + S+++
Sbjct: 1512 KQGVTGQLCEECEPRH--LLLE--EECV---------SCDDN--CTGVLLNNLDSLSENI 1556
Score = 260 (96.6 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 55/158 (34%), Positives = 74/158 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C+ G +CD C G+ +L K C PC C T+ C+ +GQ
Sbjct: 948 GQC-HCLPGVAGEKCDRCAHGFH----SLQKSGCTPCDC-----AHTQNN---CNADSGQ 994
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C PH G CD CE H+ + GCK+C+C GS + CD +TGQC C+ G
Sbjct: 995 CICPPHTRGPKCDLCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQCQCKAEFGGQN 1054
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C C + + D C C CD G+ + CD + G C
Sbjct: 1055 CSRCALGYRDYP-D-CVACDCDLSGTKAEMCDDTKGLC 1090
Score = 247 (92.0 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 56/171 (32%), Positives = 83/171 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +T GP+CD C ++G L+ PK C+ C C G+ + CD LTG
Sbjct: 992 SGQCI-CPPHTRGPKCDLCEENHWG--LS-PKLGCKACNCSDSGSDSLQ-----CDVLTG 1042
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI---------TGQC 141
QC CK G NC +C +G+ + C +CDCD G+ CD TG C
Sbjct: 1043 QCQCKAEFGGQNCSRCALGYRDY---PDCVACDCDLSGTKAEMCDDTKGLCGCEEETGIC 1099
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPSGQCP 189
C+ V G +C C+P + S + GC PC C + ++ L+ + + P
Sbjct: 1100 ACKENVFGLQCSECKPGTFALSANNALGCTPCFCFGMSTSCLEVEDHVRIP 1150
Score = 231 (86.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 54/163 (33%), Positives = 71/163 (43%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPV--CDQ 87
G CL C +T G C+ C GYF P D C PC C G+L + D
Sbjct: 340 GVCLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPCYPCGCDPFGSLSSVCVKDERQSDS 399
Query: 88 L----TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
GQC C+ G CD+C G+ C C+C +GS+N DP CLC
Sbjct: 400 QHGTWPGQCQCRDGYTGEKCDRCAFGYRGY---PNCLRCNCSLIGSINE--DPCAEPCLC 454
Query: 144 RPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCD 183
+ V G C+LC+P Y + +GC C C G + + CD
Sbjct: 455 KENVEGENCDLCKPGFYNLQERNPEGCTECFC--FGVSDV-CD 494
Score = 208 (78.3 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 62/188 (32%), Positives = 84/188 (44%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA---LALPK-----GDCEPCQCYIPGTL 76
+S A C +C G C C PGY+ + ++ + C PCQC
Sbjct: 1334 RSRAHLIEQC-RCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQC----NN 1388
Query: 77 ETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDC---DPVGSL 130
+ET CD TG+C +C+ + VG C C G+Y + G C C C +PV S
Sbjct: 1389 HSET----CDPETGKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCACPRANPV-SF 1443
Query: 131 NRTCDPITG----QC-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSLQC 182
+ TC + G C C PG G CE C +YG L G C C C+P GS + C
Sbjct: 1444 SPTC-VLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCNPSGSVHVNC 1502
Query: 183 DP-SGQCP 189
D +G+CP
Sbjct: 1503 DRVTGKCP 1510
Score = 205 (77.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 63/172 (36%), Positives = 81/172 (47%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SC 94
+C G C++CLPGY+ L G C+PC+C G TE CD G C +C
Sbjct: 691 ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN--GHA-TE-----CDT-QGVCFAC 741
Query: 95 KPHVVGTNCDQCEVGHYNIIS-G--EGCKSCDCDPVGSLNR---TCDPITGQ---C-LCR 144
+ + G CDQC G Y S G E C+ C C + N TC G+ C C
Sbjct: 742 QHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCL 801
Query: 145 PGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQ----CDP-SGQC 188
PG TG+RCE C +YG L C PC C+ G+ + Q CD +GQC
Sbjct: 802 PGYTGSRCERCANGYYGNPLVPGQSCVPCECN--GNVNPQEDGYCDTITGQC 851
Score = 191 (72.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 49/142 (34%), Positives = 66/142 (46%)
Query: 9 SVMDILLCVGP--------PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL 60
SV D LC P P+ +LK V C C+ G C+ C GY+GD L
Sbjct: 1426 SVNDCSLCACPRANPVSFSPTCVLKGVQDY--HCDACLPGYEGQYCEKCSLGYYGDP-QL 1482
Query: 61 PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK 120
P G C CQC G++ CD++TG+C CK V G C++CE H ++ E C
Sbjct: 1483 PGGSCHLCQCNPSGSVHVN-----CDRVTGKCPCKQGVTGQLCEECEPRH--LLLEEECV 1535
Query: 121 SCDCDPVGSLNRTCDPITGQCL 142
SCD + G L D ++ L
Sbjct: 1536 SCDDNCTGVLLNNLDSLSENIL 1557
Score = 139 (54.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 40/113 (35%), Positives = 54/113 (47%)
Query: 29 GT-TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
GT G C +C G +CD C GY G P +C C C + G++ + P C +
Sbjct: 402 GTWPGQC-QCRDGYTGEKCDRCAFGYRG----YP--NCLRCNCSLIGSINED---P-CAE 450
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRTCDPIT 138
C CK +V G NCD C+ G YN+ + EGC C C V + CD +T
Sbjct: 451 ---PCLCKENVEGENCDLCKPGFYNLQERNPEGCTECFCFGVSDV---CDSLT 497
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/119 (31%), Positives = 50/119 (42%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGE-----------GCKSCDCDPVGSLNRTCDP 136
L QC C G +C C G+Y E C C C+ + + TCDP
Sbjct: 1339 LIEQCRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCN---NHSETCDP 1395
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDPSGQCPGV 191
TG+CL CR G C C P +YG S++ C C C P +N + P+ GV
Sbjct: 1396 ETGKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCAC-P-RANPVSFSPTCVLKGV 1452
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 34/104 (32%), Positives = 46/104 (44%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN---IISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGV 147
C C G +C+ C G+Y I+ G C+ C C+ G CD G C C+
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN--GHATE-CDT-QGVCFACQHNT 745
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPSGQ 187
TG C+ C P YG G C+PC C P+ S + P+ Q
Sbjct: 746 TGPFCDQCLPGFYGSPSQGTPEDCQPCAC-PLSSAANNFSPTCQ 788
Score = 136 (52.9 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 38/116 (32%), Positives = 52/116 (44%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C SD L+ TG C +C GG C C GY D P DC C C + GT
Sbjct: 1027 CSDSGSDSLQCDV-LTGQC-QCKAEFGGQNCSRCALGY-RD---YP--DCVACDCDLSGT 1078
Query: 76 L-----ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDC 124
+T+ C++ TG C+CK +V G C +C+ G + + + GC C C
Sbjct: 1079 KAEMCDDTKGLCG-CEEETGICACKENVFGLQCSECKPGTFALSANNALGCTPCFC 1133
Score = 109 (43.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 41/152 (26%), Positives = 60/152 (39%)
Query: 5 VHHVSVMDILLCVG-----PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL- 58
+ +SV + +C G P +I K + C +C +NT G C+ C PGY
Sbjct: 242 IKDISVGGMCICYGHARSCPLDEITKKL-----QC-QCEHNTCGESCNRCCPGYHQKPWR 295
Query: 59 --ALPKGD-CEPCQC-------YIPGTL-ETETFTPVCDQLTGQ--C-SCKPHVVGTNCD 104
+ G+ CE C C Y T+ + + + Q TG C +C H G NC+
Sbjct: 296 PGTISAGNKCEKCNCHNKAEDCYYNQTIADQKRSMNIHGQYTGGGVCLNCSQHTTGINCE 355
Query: 105 QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
C G++ C P G CDP
Sbjct: 356 MCADGYFRPQKVSPYDDHPCYPCG-----CDP 382
Score = 100 (40.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 141 CLCRPGVTGTRCELCQPNHY---GFSLDG-CKPCMCDPIGSNSLQCDPSGQC 188
C C G TG CE C P +Y G G C+PC C+ ++ +CD G C
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN---GHATECDTQGVC 738
Score = 80 (33.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 130 LNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-----FS-------LDGCKPCMCDPIGS 177
L R+ + QC C G G C+ C P +Y FS + C PC C+ +
Sbjct: 1332 LGRSRAHLIEQCRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCN---N 1388
Query: 178 NSLQCDP-SGQC 188
+S CDP +G+C
Sbjct: 1389 HSETCDPETGKC 1400
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 354 (129.7 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 64/158 (40%), Positives = 87/158 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CLKC+ NT G C+ C GY+GDA+ + C C+C++ G+L + VC TG
Sbjct: 848 TGQCLKCVGNTAGLHCEKCADGYYGDAVT--EKSCRACECHVNGSLSS-----VCHHETG 900
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C CK V+G CD+C G Y +++G GC C+C GS++ C+ GQC C PGV G
Sbjct: 901 ICDCKSDVIGQKCDKCLNGFYGLLTGLGCIPCNCSQFGSISEDCNH-QGQCHCLPGVAGE 959
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+C+ C + GC PC C N+ D SGQC
Sbjct: 960 KCDRCAHGFHSLQKSGCTPCDCAHT-QNNCNAD-SGQC 995
Score = 304 (112.1 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 64/160 (40%), Positives = 85/160 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C + G +CD CL G++G L G C PC C G++ + C+ G
Sbjct: 899 TGIC-DCKSDVIGQKCDKCLNGFYGLLTGL--G-CIPCNCSQFGSISED-----CNH-QG 948
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P V G CD+C G +++ GC CDC C+ +GQC+C P G
Sbjct: 949 QCHCLPGVAGEKCDRCAHGFHSL-QKSGCTPCDC---AHTQNNCNADSGQCICPPHTRGP 1004
Query: 151 RCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQC 188
+C+LC+ NH+G S GCK C C GS+SLQCD +GQC
Sbjct: 1005 KCDLCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQC 1044
Score = 295 (108.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 63/173 (36%), Positives = 86/173 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T G C C +NT GP CD CLPG++G DC+PC C P + F+P C
Sbjct: 734 TQGVCFACQHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCAC--PLSSAANNFSPTCQLSE 791
Query: 90 GQ---CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRT----CDPITG 139
G+ C C P G+ C++C G+Y ++ G+ C C+C+ G++N CD ITG
Sbjct: 792 GEGIVCDKCLPGYTGSRCERCANGYYGNPLVPGQSCVPCECN--GNVNPQEDGYCDTITG 849
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCD-PSGQC 188
QCL C G CE C +YG ++ C+ C C GS S C +G C
Sbjct: 850 QCLKCVGNTAGLHCEKCADGYYGDAVTEKSCRACECHVNGSLSSVCHHETGIC 902
Score = 275 (101.9 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 63/180 (35%), Positives = 89/180 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C NT G C C PGY+G + DC C C P +F+P C L G
Sbjct: 1397 TGKCLNCRDNTVGDYCSACAPGYYGKVIG-SVNDCSLCAC--PRA-NPVSFSPTC-VLKG 1451
Query: 91 ----QC-SCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C +C P G C++C +G+Y + G C C C+P GS++ CD +TG+C C
Sbjct: 1452 VQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCNPSGSVHVNCDRVTGKCPC 1511
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSDDV 203
+ GVTG CE C+P H L+ + C+ CD + C GV +N + S+++
Sbjct: 1512 KQGVTGQLCEECEPRH--LLLE--EECV---------SCDDN--CTGVLLNNLDSLSENI 1556
Score = 260 (96.6 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 55/158 (34%), Positives = 74/158 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C+ G +CD C G+ +L K C PC C T+ C+ +GQ
Sbjct: 948 GQC-HCLPGVAGEKCDRCAHGFH----SLQKSGCTPCDC-----AHTQNN---CNADSGQ 994
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C C PH G CD CE H+ + GCK+C+C GS + CD +TGQC C+ G
Sbjct: 995 CICPPHTRGPKCDLCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQCQCKAEFGGQN 1054
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C C + + D C C CD G+ + CD + G C
Sbjct: 1055 CSRCALGYRDYP-D-CVACDCDLSGTKAEMCDDTKGLC 1090
Score = 247 (92.0 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 56/171 (32%), Positives = 83/171 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +T GP+CD C ++G L+ PK C+ C C G+ + CD LTG
Sbjct: 992 SGQCI-CPPHTRGPKCDLCEENHWG--LS-PKLGCKACNCSDSGSDSLQ-----CDVLTG 1042
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI---------TGQC 141
QC CK G NC +C +G+ + C +CDCD G+ CD TG C
Sbjct: 1043 QCQCKAEFGGQNCSRCALGYRDY---PDCVACDCDLSGTKAEMCDDTKGLCGCEEETGIC 1099
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPSGQCP 189
C+ V G +C C+P + S + GC PC C + ++ L+ + + P
Sbjct: 1100 ACKENVFGLQCSECKPGTFALSANNALGCTPCFCFGMSTSCLEVEDHVRIP 1150
Score = 231 (86.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 54/163 (33%), Positives = 71/163 (43%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPV--CDQ 87
G CL C +T G C+ C GYF P D C PC C G+L + D
Sbjct: 340 GVCLNCSQHTTGINCEMCADGYFRPQKVSPYDDHPCYPCGCDPFGSLSSVCVKDERQSDS 399
Query: 88 L----TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
GQC C+ G CD+C G+ C C+C +GS+N DP CLC
Sbjct: 400 QHGTWPGQCQCRDGYTGEKCDRCAFGYRGY---PNCLRCNCSLIGSINE--DPCAEPCLC 454
Query: 144 RPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCD 183
+ V G C+LC+P Y + +GC C C G + + CD
Sbjct: 455 KENVEGENCDLCKPGFYNLQERNPEGCTECFC--FGVSDV-CD 494
Score = 208 (78.3 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 62/188 (32%), Positives = 84/188 (44%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA---LALPK-----GDCEPCQCYIPGTL 76
+S A C +C G C C PGY+ + ++ + C PCQC
Sbjct: 1334 RSRAHLIEQC-RCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQC----NN 1388
Query: 77 ETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDC---DPVGSL 130
+ET CD TG+C +C+ + VG C C G+Y + G C C C +PV S
Sbjct: 1389 HSET----CDPETGKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCACPRANPV-SF 1443
Query: 131 NRTCDPITG----QC-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSLQC 182
+ TC + G C C PG G CE C +YG L G C C C+P GS + C
Sbjct: 1444 SPTC-VLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQLPGGSCHLCQCNPSGSVHVNC 1502
Query: 183 DP-SGQCP 189
D +G+CP
Sbjct: 1503 DRVTGKCP 1510
Score = 205 (77.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 63/172 (36%), Positives = 81/172 (47%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SC 94
+C G C++CLPGY+ L G C+PC+C G TE CD G C +C
Sbjct: 691 ECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN--GHA-TE-----CDT-QGVCFAC 741
Query: 95 KPHVVGTNCDQCEVGHYNIIS-G--EGCKSCDCDPVGSLNR---TCDPITGQ---C-LCR 144
+ + G CDQC G Y S G E C+ C C + N TC G+ C C
Sbjct: 742 QHNTTGPFCDQCLPGFYGSPSQGTPEDCQPCACPLSSAANNFSPTCQLSEGEGIVCDKCL 801
Query: 145 PGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQ----CDP-SGQC 188
PG TG+RCE C +YG L C PC C+ G+ + Q CD +GQC
Sbjct: 802 PGYTGSRCERCANGYYGNPLVPGQSCVPCECN--GNVNPQEDGYCDTITGQC 851
Score = 191 (72.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 49/142 (34%), Positives = 66/142 (46%)
Query: 9 SVMDILLCVGP--------PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALAL 60
SV D LC P P+ +LK V C C+ G C+ C GY+GD L
Sbjct: 1426 SVNDCSLCACPRANPVSFSPTCVLKGVQDY--HCDACLPGYEGQYCEKCSLGYYGDP-QL 1482
Query: 61 PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK 120
P G C CQC G++ CD++TG+C CK V G C++CE H ++ E C
Sbjct: 1483 PGGSCHLCQCNPSGSVHVN-----CDRVTGKCPCKQGVTGQLCEECEPRH--LLLEEECV 1535
Query: 121 SCDCDPVGSLNRTCDPITGQCL 142
SCD + G L D ++ L
Sbjct: 1536 SCDDNCTGVLLNNLDSLSENIL 1557
Score = 139 (54.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 40/113 (35%), Positives = 54/113 (47%)
Query: 29 GT-TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
GT G C +C G +CD C GY G P +C C C + G++ + P C +
Sbjct: 402 GTWPGQC-QCRDGYTGEKCDRCAFGYRG----YP--NCLRCNCSLIGSINED---P-CAE 450
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRTCDPIT 138
C CK +V G NCD C+ G YN+ + EGC C C V + CD +T
Sbjct: 451 ---PCLCKENVEGENCDLCKPGFYNLQERNPEGCTECFCFGVSDV---CDSLT 497
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/119 (31%), Positives = 50/119 (42%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGE-----------GCKSCDCDPVGSLNRTCDP 136
L QC C G +C C G+Y E C C C+ + + TCDP
Sbjct: 1339 LIEQCRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCN---NHSETCDP 1395
Query: 137 ITGQCL-CRPGVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDPSGQCPGV 191
TG+CL CR G C C P +YG S++ C C C P +N + P+ GV
Sbjct: 1396 ETGKCLNCRDNTVGDYCSACAPGYYGKVIGSVNDCSLCAC-P-RANPVSFSPTCVLKGV 1452
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 34/104 (32%), Positives = 46/104 (44%)
Query: 92 CSCKPHVVGTNCDQCEVGHYN---IISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGV 147
C C G +C+ C G+Y I+ G C+ C C+ G CD G C C+
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN--GHATE-CDT-QGVCFACQHNT 745
Query: 148 TGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPSGQ 187
TG C+ C P YG G C+PC C P+ S + P+ Q
Sbjct: 746 TGPFCDQCLPGFYGSPSQGTPEDCQPCAC-PLSSAANNFSPTCQ 788
Score = 136 (52.9 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 38/116 (32%), Positives = 52/116 (44%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C SD L+ TG C +C GG C C GY D P DC C C + GT
Sbjct: 1027 CSDSGSDSLQCDV-LTGQC-QCKAEFGGQNCSRCALGY-RD---YP--DCVACDCDLSGT 1078
Query: 76 L-----ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDC 124
+T+ C++ TG C+CK +V G C +C+ G + + + GC C C
Sbjct: 1079 KAEMCDDTKGLCG-CEEETGICACKENVFGLQCSECKPGTFALSANNALGCTPCFC 1133
Score = 109 (43.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 41/152 (26%), Positives = 60/152 (39%)
Query: 5 VHHVSVMDILLCVG-----PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL- 58
+ +SV + +C G P +I K + C +C +NT G C+ C PGY
Sbjct: 242 IKDISVGGMCICYGHARSCPLDEITKKL-----QC-QCEHNTCGESCNRCCPGYHQKPWR 295
Query: 59 --ALPKGD-CEPCQC-------YIPGTL-ETETFTPVCDQLTGQ--C-SCKPHVVGTNCD 104
+ G+ CE C C Y T+ + + + Q TG C +C H G NC+
Sbjct: 296 PGTISAGNKCEKCNCHNKAEDCYYNQTIADQKRSMNIHGQYTGGGVCLNCSQHTTGINCE 355
Query: 105 QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
C G++ C P G CDP
Sbjct: 356 MCADGYFRPQKVSPYDDHPCYPCG-----CDP 382
Score = 100 (40.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 141 CLCRPGVTGTRCELCQPNHY---GFSLDG-CKPCMCDPIGSNSLQCDPSGQC 188
C C G TG CE C P +Y G G C+PC C+ ++ +CD G C
Sbjct: 690 CECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCN---GHATECDTQGVC 738
Score = 80 (33.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 130 LNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-----FS-------LDGCKPCMCDPIGS 177
L R+ + QC C G G C+ C P +Y FS + C PC C+ +
Sbjct: 1332 LGRSRAHLIEQCRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVPCQCN---N 1388
Query: 178 NSLQCDP-SGQC 188
+S CDP +G+C
Sbjct: 1389 HSETCDPETGKC 1400
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 354 (129.7 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 71/187 (37%), Positives = 96/187 (51%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE 77
G P+ + TG C C+ +T GP+C+ C PG++G+AL LP G+C C C
Sbjct: 1975 GDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNAL-LP-GNCTRCDC------- 2025
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
T T CD +G C CK V G CD+C+ GH+ GC+ C C P C P
Sbjct: 2026 TPCGTEACDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCACGPAAE-GSECHPQ 2084
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFM 193
+GQC CRPG G +C C P ++G GC+ C C P G +CDP +G+C PG+
Sbjct: 2085 SGQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQC-PGG----RCDPHTGRCNCPPGLSG 2139
Query: 194 NRAEMSS 200
R + S
Sbjct: 2140 ERCDTCS 2146
Score = 351 (128.6 bits), Expect = 4.5e-30, P = 4.5e-30
Identities = 70/164 (42%), Positives = 84/164 (51%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G T CL C G C+ C PG+FG+ L L C+PC C G + CD L
Sbjct: 1933 GRT-QCL-CKPGYAGASCERCAPGFFGNPLVLGSS-CQPCDC--SGNGDPNLLFSDCDPL 1987
Query: 89 TGQC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
TG C C H G C+ C G Y N + C CDC P G+ CDP +G CLC+ G
Sbjct: 1988 TGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGT--EACDPHSGHCLCKAG 2045
Query: 147 VTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSNSLQCDP-SGQC 188
VTG RC+ CQ H+GF GC+PC C P S +C P SGQC
Sbjct: 2046 VTGRRCDRCQEGHFGFDGCGGCRPCACGPAAEGS-ECHPQSGQC 2088
Score = 285 (105.4 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 62/169 (36%), Positives = 82/169 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C G F + P C C C P ++ + F C G
Sbjct: 1877 SGVCVDCQHNTEGAHCERCQAG-FVSSRDDPSAPCVSCPC--PLSVPSNNFAEGCVLRGG 1933
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLN---RTCDPITGQCL- 142
QC CKP G +C++C G + ++ G C+ CDC G N CDP+TG C
Sbjct: 1934 RTQCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRG 1993
Query: 143 CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
C TG RCE+C P YG +L C C C P G+ + CDP SG C
Sbjct: 1994 CLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEA--CDPHSGHC 2040
Score = 278 (102.9 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 68/189 (35%), Positives = 82/189 (43%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
LC P+ L G CL C GP CD C PGY G P +C+ C C G
Sbjct: 586 LCGCSPAGTLPEGCDEAGRCL-CQPEFAGPHCDRCRPGYHG----FP--NCQACTCDPRG 638
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
L+ +C G C C+P GT C +C G + S C C C GSL+ C
Sbjct: 639 ALDQ-----LCGA-GGLCRCRPGYTGTACQECSPGFHGFPS---CVPCHCSAEGSLHAAC 689
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQ-CDPSGQCPGVFM 193
DP +GQC CRP VTG RC+ C P Y F C+ C P G + P Q P +
Sbjct: 690 DPRSGQCSCRPRVTGLRCDTCVPGAYNFPY--CEAGSCHPAGLAPVDPALPEAQVPCMCR 747
Query: 194 NRAEMSSDD 202
E S D
Sbjct: 748 AHVEGPSCD 756
Score = 277 (102.6 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 62/180 (34%), Positives = 83/180 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C ++T G C+ CLPG++ L P C C C E++ C+ L
Sbjct: 391 GVCIDCQHHTTGVNCERCLPGFYRSPNHPLDSPHV-CRRCNC------ESDFTDGTCEDL 443
Query: 89 TGQCSCKPHVVGTNCDQCEVGH------Y-----------NIISGEGCKSCDCDPVGSLN 131
TG+C C+P+ G CD C G Y ++ +CDC G+
Sbjct: 444 TGRCYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQG 503
Query: 132 RTC--DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C DP G+CLC+P GT CELC P YG GC+PC C G +CDP +GQC
Sbjct: 504 NACRKDPRVGRCLCKPNFQGTHCELCAPGFYG---PGCQPCQCSSPGVADDRCDPDTGQC 560
Score = 273 (101.2 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 58/147 (39%), Positives = 69/147 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C T P C C P FG P CE C C PG E P CD +G
Sbjct: 1495 TGQCI-CPPRTIPPDCLLCQPQTFG---CHPLVGCEECNCSGPGIQELTD--PTCDTDSG 1548
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G CD C G + C+ CDC G+ CDP+TGQC C+ V G
Sbjct: 1549 QCKCRPNVTGRRCDTCSPGFHGY---PRCRPCDCHEAGTAPGVCDPLTGQCYCKENVQGP 1605
Query: 151 RCELCQPNHYGFSLD-----GCKPCMC 172
+C+ C FSLD GC C C
Sbjct: 1606 KCDQCSLGT--FSLDAANPKGCTRCFC 1630
Score = 272 (100.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 62/172 (36%), Positives = 77/172 (44%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFG------------DAL--ALPKGDCEPCQCYIPGTL 76
TG C C N G +CD C G+ G D LP G C C GT
Sbjct: 444 TGRCY-CRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQVLPAGQIVNCDCSAAGTQ 502
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
D G+C CKP+ GT+C+ C G Y G GC+ C C G + CDP
Sbjct: 503 GNACRK---DPRVGRCLCKPNFQGTHCELCAPGFY----GPGCQPCQCSSPGVADDRCDP 555
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TGQC CR G G C+ C P ++ F L C+ C C P G+ CD +G+C
Sbjct: 556 DTGQCRCRVGFEGATCDRCAPGYFHFPL--CQLCGCSPAGTLPEGCDEAGRC 605
Score = 270 (100.1 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 52/129 (40%), Positives = 70/129 (54%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C+ C + GP CD C PG++G + + P+G C C C + GTL C TGQC
Sbjct: 744 CM-CRAHVEGPSCDRCKPGFWGLSPSNPEG-CTRCSCDLRGTLGG---VAECQPGTGQCF 798
Query: 94 CKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
CKPHV G C C+ G + + + GC+SC CD G+L ++C+P TG C CRP G
Sbjct: 799 CKPHVCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQSCEPRTGVCRCRPNTQGPT 858
Query: 152 CELCQPNHY 160
C +HY
Sbjct: 859 CSEPARDHY 867
Score = 266 (98.7 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 57/156 (36%), Positives = 76/156 (48%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C + G C C GY+G P +C PC C G +CD+LTGQC C P
Sbjct: 1459 CHAHVIGRDCSRCATGYWG----FP--NCRPCDC---GAR-------LCDELTGQCICPP 1502
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGS---LNRTCDPITGQCLCRPGVTGTRCE 153
+ +C C+ + GC+ C+C G + TCD +GQC CRP VTG RC+
Sbjct: 1503 RTIPPDCLLCQPQTFGCHPLVGCEECNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCD 1562
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C P +G+ C+PC C G+ CDP +GQC
Sbjct: 1563 TCSPGFHGYPR--CRPCDCHEAGTAPGVCDPLTGQC 1596
Score = 257 (95.5 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 57/166 (34%), Positives = 78/166 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CDTC+PG + P CE C+ G + P +
Sbjct: 693 SGQC-SCRPRVTGLRCDTCVPGAYN----FPY--CEAGSCHPAGLAPVD---PALPEAQV 742
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
C C+ HV G +CD+C+ G + + EGC C CD G+L C P TGQC C+P
Sbjct: 743 PCMCRAHVEGPSCDRCKPGFWGLSPSNPEGCTRCSCDLRGTLGGVAECQPGTGQCFCKPH 802
Query: 147 VTGTRCELCQPNHYGFS-LD--GCKPCMCDPIGSNSLQCDP-SGQC 188
V G C C+ +G D GC+ C CD G+ C+P +G C
Sbjct: 803 VCGQACASCKDGFFGLDQADYFGCRSCRCDIGGALGQSCEPRTGVC 848
Score = 240 (89.5 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 56/168 (33%), Positives = 80/168 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G CL C G +CD C G+FG D G C PC C P +E C +
Sbjct: 2037 SGHCL-CKAGVTGRRCDRCQEGHFGFDGC----GGCRPCACG-PAAEGSE-----CHPQS 2085
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+P +G C +C G++ + +GC+ C C P G CDP TG+C C PG++G
Sbjct: 2086 GQCHCRPGTMGPQCRECAPGYWGLPE-QGCRRCQC-PGGR----CDPHTGRCNCPPGLSG 2139
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAE 197
RC+ C H P P+G +S+ C+ C + ++ E
Sbjct: 2140 ERCDTCSQQHQ-------VPVPGGPVG-HSIHCEVCDHCVVLLLDDLE 2179
Score = 232 (86.7 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 53/142 (37%), Positives = 67/142 (47%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC C+ E P C+ GQC C HV+G +C +C G++ C+ CDC
Sbjct: 1437 PCGCH-----EVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGF---PNCRPCDC-- 1486
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ---C 182
G+ R CD +TGQC+C P C LCQP +G L GC+ C C G L C
Sbjct: 1487 -GA--RLCDELTGQCICPPRTIPPDCLLCQPQTFGCHPLVGCEECNCSGPGIQELTDPTC 1543
Query: 183 DP-SGQC---PGVFMNRAEMSS 200
D SGQC P V R + S
Sbjct: 1544 DTDSGQCKCRPNVTGRRCDTCS 1565
Score = 222 (83.2 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 57/172 (33%), Positives = 76/172 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
CL C + G C C PG++ D L G C PCQC+ G + C +G C
Sbjct: 1831 CL-CPASYRGDSCQECAPGFYRDVKGLFLGRCVPCQCH--GHSDR------CLPGSGVCV 1881
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCD---PVGSLNRTCDPITG--QCLCRP 145
C+ + G +C++C+ G + C SC C P + C G QCLC+P
Sbjct: 1882 DCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPCPLSVPSNNFAEGCVLRGGRTQCLCKP 1941
Query: 146 GVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQCPG 190
G G CE C P +G L C+PC C G +L CDP +G C G
Sbjct: 1942 GYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFSDCDPLTGACRG 1993
Score = 168 (64.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 46/149 (30%), Positives = 66/149 (44%)
Query: 57 ALALPKGDCEPCQCYIPGT-------LETETFTPVCD---QLTGQC-SCKPHVVGTNCDQ 105
A A +C+ C CY T ++ + D Q G C C+ H G NC++
Sbjct: 348 ATANSANECQSCNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCER 407
Query: 106 CEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
C G Y + S C+ C+C+ + TC+ +TG+C CRP +G RC++C
Sbjct: 408 CLPGFYRSPNHPLDSPHVCRRCNCES-DFTDGTCEDLTGRCYCRPNFSGERCDVCAEGFT 466
Query: 161 GFSLDGCKPCMCDPIGSNSL--QCDPSGQ 187
GF C P P SN Q P+GQ
Sbjct: 467 GFP--SCYPT---PSSSNDTREQVLPAGQ 490
Score = 139 (54.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM 171
++ G + C C VG+ TC+P GQC C V G C C ++GF C+PC
Sbjct: 1428 SLFYNNGARPCGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFP--NCRPCD 1485
Query: 172 CDPIGSNSLQCDP-SGQC 188
C G+ CD +GQC
Sbjct: 1486 C---GARL--CDELTGQC 1498
Score = 40 (19.1 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 35 LKCIYNTG--GPQCDTCLPGYF 54
+ CI + G GP CLP F
Sbjct: 1204 VSCISSHGAFGPNSAACLPSRF 1225
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 347 (127.2 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 71/170 (41%), Positives = 91/170 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C + G +CD C PG+ G A P+G C PC C I GT + P C++ TG
Sbjct: 396 TGQCV-CKDHVQGERCDLCKPGFTGLTFANPQG-CHPCDCSILGTRQD---MP-CEEETG 449
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C P+VVG CDQC H+ + SG GC+ C CDP SL+ C+ TGQC CR G G
Sbjct: 450 RCLCLPNVVGPKCDQCAPSHWKLASGRGCEPCACDPRNSLSSQCNQFTGQCPCREGFGGL 509
Query: 151 RCEL-----CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
C C +G GC+ C CD G+ CD SG+C PG+
Sbjct: 510 TCSSAAIRQCPDRTHGDVATGCRACDCDFRGTEGPGCDKTSGRCLCRPGL 559
Score = 328 (120.5 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 70/182 (38%), Positives = 98/182 (53%)
Query: 16 CVGPPSDILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDAL-ALPKGD-CEPCQCYI 72
C P+ + + GT+G C C +T G C+ C YF + P + C PC+C
Sbjct: 325 CHFDPA-VFAASQGTSGGVCDNCQDHTEGKNCERCQLHYFRNRRPGAPIHETCIPCECDP 383
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL 130
G + P CD+LTGQC CK HV G CD C+ G + + +GC CDC +G+
Sbjct: 384 DGAVPG---AP-CDRLTGQCVCKDHVQGERCDLCKPGFTGLTFANPQGCHPCDCSILGTR 439
Query: 131 -NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQ 187
+ C+ TG+CLC P V G +C+ C P+H+ + GC+PC CDP S S QC+ +GQ
Sbjct: 440 QDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGRGCEPCACDPRNSLSSQCNQFTGQ 499
Query: 188 CP 189
CP
Sbjct: 500 CP 501
Score = 277 (102.6 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 67/183 (36%), Positives = 91/183 (49%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQ-CYIPGTLETETFTP 83
+ A D C +NT GP CD C P Y +G D CQ C G ET F P
Sbjct: 270 TTAVQVNDVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDIHECQRCDCNGHSETCHFDP 329
Query: 84 V---CDQLT--GQC-SCKPHVVGTNCDQCEVGHY--NIISG----EGCKSCDCDPVGSL- 130
Q T G C +C+ H G NC++C++ HY N G E C C+CDP G++
Sbjct: 330 AVFAASQGTSGGVCDNCQDHTEGKNCERCQL-HYFRNRRPGAPIHETCIPCECDPDGAVP 388
Query: 131 NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNS-LQCDP-S 185
CD +TGQC+C+ V G RC+LC+P G + GC PC C +G+ + C+ +
Sbjct: 389 GAPCDRLTGQCVCKDHVQGERCDLCKPGFTGLTFANPQGCHPCDCSILGTRQDMPCEEET 448
Query: 186 GQC 188
G+C
Sbjct: 449 GRC 451
Score = 263 (97.6 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 55/132 (41%), Positives = 76/132 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C+ N GP+CD C P ++ LA +G CEPC C +L ++ C+Q TG
Sbjct: 448 TGRCL-CLPNVVGPKCDQCAPSHW--KLASGRG-CEPCACDPRNSLSSQ-----CNQFTG 498
Query: 91 QCSCKPHVVGTNCD-----QC-EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
QC C+ G C QC + H ++ +G C++CDCD G+ CD +G+CLCR
Sbjct: 499 QCPCREGFGGLTCSSAAIRQCPDRTHGDVATG--CRACDCDFRGTEGPGCDKTSGRCLCR 556
Query: 145 PGVTGTRCELCQ 156
PG+TG RC+ CQ
Sbjct: 557 PGLTGPRCDQCQ 568
Score = 234 (87.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 53/143 (37%), Positives = 75/143 (52%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C+ N GP+CD C P ++ LA +G CEPC C +L ++ C+Q TGQC C+
Sbjct: 453 CLPNVVGPKCDQCAPSHW--KLASGRG-CEPCACDPRNSLSSQ-----CNQFTGQCPCRE 504
Query: 97 HVVGTNCD-----QC-EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
G C QC + H ++ +G C++CDCD G+ CD +G+CLCRPG+TG
Sbjct: 505 GFGGLTCSSAAIRQCPDRTHGDVATG--CRACDCDFRGTEGPGCDKTSGRCLCRPGLTGP 562
Query: 151 RCELCQPNHYGFSLDGCKPCMCD 173
RC+ CQ + CD
Sbjct: 563 RCDQCQRGY------------CD 573
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 37/116 (31%), Positives = 47/116 (40%)
Query: 16 CVGPPSDILKSVAGT-TGDCLKCIYNTGGPQCDT-----CLPGYFGDALALPKGDCEPCQ 69
C P + L S TG C C GG C + C GD C C
Sbjct: 481 CACDPRNSLSSQCNQFTGQC-PCREGFGGLTCSSAAIRQCPDRTHGDVAT----GCRACD 535
Query: 70 CYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGH---YNIISGEGCKSC 122
C GT E P CD+ +G+C C+P + G CDQC+ G+ Y + C SC
Sbjct: 536 CDFRGT---EG--PGCDKTSGRCLCRPGLTGPRCDQCQRGYCDRYPVCVA--CHSC 584
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 347 (127.2 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 72/170 (42%), Positives = 90/170 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C + G +CD C PG+ G A P+G C C C I G+ P CD+ TG
Sbjct: 396 TGQCV-CKEHVQGERCDLCKPGFTGLTYANPQG-CHRCDCNILGSRRD---LP-CDEETG 449
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C PHVVG CDQC H+ + SG GC+ C CDP +L+ C+ TGQC CR G G
Sbjct: 450 QCLCLPHVVGPKCDQCAPYHWKLASGRGCEPCACDPHNALSPQCNQFTGQCPCREGFGGL 509
Query: 151 RCEL-----CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
C C YG + GC+ C CD G+ CD SG+C PG+
Sbjct: 510 TCNAAALRQCPDRTYGDAGSGCRACDCDFRGTEGPGCDKASGRCLCRPGL 559
Score = 323 (118.8 bits), Expect = 9.6e-28, P = 9.6e-28
Identities = 70/181 (38%), Positives = 93/181 (51%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL-ALP-KGDCEPCQCYIP 73
C P+ S G C C +T G C+ C YF + P + C PC+C
Sbjct: 325 CHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNRRPGAPIQETCIPCECDPD 384
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL- 130
G + P CD +TGQC CK HV G CD C+ G + + +GC CDC+ +GS
Sbjct: 385 GAVPG---VP-CDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRR 440
Query: 131 NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQC 188
+ CD TGQCLC P V G +C+ C P H+ + GC+PC CDP + S QC+ +GQC
Sbjct: 441 DLPCDEETGQCLCLPHVVGPKCDQCAPYHWKLASGRGCEPCACDPHNALSPQCNQFTGQC 500
Query: 189 P 189
P
Sbjct: 501 P 501
Score = 283 (104.7 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 67/177 (37%), Positives = 92/177 (51%)
Query: 33 DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP--CQ-CYIPGTLETETFTPVCDQLT 89
D C +NT GP C+ C P ++ + P D +P CQ C G ET F P +
Sbjct: 277 DVCVCQHNTAGPNCERCAP-FYNNQPWRPADDQDPHECQRCDCNGHSETCHFDPAVFAAS 335
Query: 90 -----GQC-SCKPHVVGTNCDQCEVGHY--NIISG----EGCKSCDCDPVGSLNRT-CDP 136
G C +C+ H G NC++C++ HY N G E C C+CDP G++ CDP
Sbjct: 336 QGAHGGVCDNCRDHTEGKNCERCQL-HYFRNRRPGAPIQETCIPCECDPDGAVPGVPCDP 394
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSN-SLQCDP-SGQC 188
+TGQC+C+ V G RC+LC+P G + GC C C+ +GS L CD +GQC
Sbjct: 395 VTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDLPCDEETGQC 451
Score = 274 (101.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 60/148 (40%), Positives = 80/148 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C+ + GP+CD C P ++ LA +G CEPC C L +P C+Q TG
Sbjct: 448 TGQCL-CLPHVVGPKCDQCAPYHW--KLASGRG-CEPCACDPHNAL-----SPQCNQFTG 498
Query: 91 QCSCKPHVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
QC C+ G C+ QC Y +G GC++CDCD G+ CD +G+CLCRP
Sbjct: 499 QCPCREGFGGLTCNAAALRQCPDRTYGD-AGSGCRACDCDFRGTEGPGCDKASGRCLCRP 557
Query: 146 GVTGTRCELCQPNH---YGFSLDGCKPC 170
G+TG RC+ CQ + Y + C PC
Sbjct: 558 GLTGPRCDQCQRGYCDRYPVCV-ACHPC 584
Score = 238 (88.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 58/158 (36%), Positives = 79/158 (50%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C+ + GP+CD C P ++ LA +G CEPC C L +P C+Q TGQC C+
Sbjct: 453 CLPHVVGPKCDQCAPYHW--KLASGRG-CEPCACDPHNAL-----SPQCNQFTGQCPCRE 504
Query: 97 HVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
G C+ QC Y +G GC++CDCD G+ CD +G+CLCRPG+TG R
Sbjct: 505 GFGGLTCNAAALRQCPDRTYGD-AGSGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPR 563
Query: 152 CELCQPNHYGFSLDGCKPCMCD--PIGSNSLQCDPSGQ 187
C+ CQ + CD P+ + C P Q
Sbjct: 564 CDQCQRGY------------CDRYPV---CVACHPCFQ 586
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 346 (126.9 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 70/170 (41%), Positives = 88/170 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C + G +CD C PG+ G + P+G C C C + G P CD+ TG
Sbjct: 396 TGQCV-CKEHVQGERCDLCKPGFTGLTFSNPQG-CHRCDCSVLGARRD---VP-CDEETG 449
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C PHVVG CDQC H+ + SG GC+ C CDP SL C+ TGQC CR G G
Sbjct: 450 RCVCLPHVVGPKCDQCAPHHWKLASGRGCEPCACDPHNSLGPQCNQFTGQCACREGFGGL 509
Query: 151 RCEL-----CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
C C YG + GC+ C CD G+ CD SG+C PG+
Sbjct: 510 TCRAAAIRQCPDRTYGDAAAGCRACDCDFRGTEGPGCDKASGRCLCRPGL 559
Score = 310 (114.2 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 67/180 (37%), Positives = 90/180 (50%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL-ALP-KGDCEPCQCYIP 73
C P+ S G C C +T G C+ C YF + P + C PC+C
Sbjct: 325 CHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNRRPGAPIQETCIPCECDPD 384
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLN 131
G + P CD LTGQC CK HV G CD C+ G + + +GC CDC +G+
Sbjct: 385 GAVPG---AP-CDPLTGQCVCKEHVQGERCDLCKPGFTGLTFSNPQGCHRCDCSVLGARR 440
Query: 132 RT-CDPITGQCLCRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQC 188
CD TG+C+C P V G +C+ C P+H+ + GC+PC CDP S QC+ +GQC
Sbjct: 441 DVPCDEETGRCVCLPHVVGPKCDQCAPHHWKLASGRGCEPCACDPHNSLGPQCNQFTGQC 500
Score = 273 (101.2 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 64/176 (36%), Positives = 92/176 (52%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP--CQ-CYIPGTLETETFTPVCDQLT- 89
C+ C +NT GP C+ C P ++ + P D +P CQ C G ET F P +
Sbjct: 279 CV-CQHNTAGPNCERCAP-FYNNRPWRPAEDQDPHECQRCDCNGHSETCHFDPAVFAASQ 336
Query: 90 ----GQC-SCKPHVVGTNCDQCEVGHY--NIISG----EGCKSCDCDPVGSL-NRTCDPI 137
G C +C+ H G NC++C++ HY N G E C C+CDP G++ CDP+
Sbjct: 337 GAHGGVCDNCRDHTEGRNCERCQL-HYFRNRRPGAPIQETCIPCECDPDGAVPGAPCDPL 395
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSN-SLQCDP-SGQC 188
TGQC+C+ V G RC+LC+P G + GC C C +G+ + CD +G+C
Sbjct: 396 TGQCVCKEHVQGERCDLCKPGFTGLTFSNPQGCHRCDCSVLGARRDVPCDEETGRC 451
Score = 258 (95.9 bits), Expect = 8.3e-21, P = 8.3e-21
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C+ + GP+CD C P ++ LA +G CEPC C +L P C+Q TG
Sbjct: 448 TGRCV-CLPHVVGPKCDQCAPHHW--KLASGRG-CEPCACDPHNSLG-----PQCNQFTG 498
Query: 91 QCSCKPHVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
QC+C+ G C QC Y + GC++CDCD G+ CD +G+CLCRP
Sbjct: 499 QCACREGFGGLTCRAAAIRQCPDRTYGDAAA-GCRACDCDFRGTEGPGCDKASGRCLCRP 557
Query: 146 GVTGTRCELCQPNHYGFS--LDGCKPC 170
G+TG RC+ CQ + + C PC
Sbjct: 558 GLTGPRCDQCQRGYCDRAPVCVACHPC 584
Score = 230 (86.0 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 56/156 (35%), Positives = 77/156 (49%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C+ + GP+CD C P ++ LA +G CEPC C +L P C+Q TGQC+C+
Sbjct: 453 CLPHVVGPKCDQCAPHHW--KLASGRG-CEPCACDPHNSLG-----PQCNQFTGQCACRE 504
Query: 97 HVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
G C QC Y + GC++CDCD G+ CD +G+CLCRPG+TG R
Sbjct: 505 GFGGLTCRAAAIRQCPDRTYGDAAA-GCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPR 563
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQ 187
C+ CQ + C P+ + C P Q
Sbjct: 564 CDQCQRGY----------CDRAPV---CVACHPCFQ 586
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 350 (128.3 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 62/159 (38%), Positives = 93/159 (58%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C T G C+ C GYFGDA+ +C+PC+C + G+ F+ +C + TG
Sbjct: 846 SGSCLICKPGTTGRFCELCADGYFGDAVDAK--NCQPCRCNVNGS-----FSEICHRKTG 898
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G CD+C+ + + G GC C+C+ GS + C+ +GQC C+PGV G
Sbjct: 899 QCECRPNVQGQRCDECKPETFGLQLGRGCIPCNCNSFGSKSFDCEA-SGQCWCQPGVAGK 957
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N C+P +GQC
Sbjct: 958 KCDRCAHGYFNFQEGGCTACDCSHLGNN---CNPKTGQC 993
Score = 327 (120.2 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 67/170 (39%), Positives = 95/170 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
TG+CL C +TGGP C+ CLPG++GD DC+PC C P + + F+P C D+
Sbjct: 733 TGECLSCKDHTGGPYCNECLPGFYGDPTRGTSEDCQPCAC--PLNIPSNNFSPTCHLDRS 790
Query: 89 TGQ-CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC-DPVG-SLNRTCDPITGQCL 142
G C C G C++C G++ I G C+ C C D + S+ +CD ++G CL
Sbjct: 791 LGLICDECPVGYTGPRCERCAEGYFGQPSIPGGSCQPCLCNDNLDFSIPGSCDSLSGSCL 850
Query: 143 -CRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCD-PSGQC 188
C+PG TG CELC ++G ++D C+PC C+ GS S C +GQC
Sbjct: 851 ICKPGTTGRFCELCADGYFGDAVDAKNCQPCRCNVNGSFSEICHRKTGQC 900
Score = 272 (100.8 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 56/149 (37%), Positives = 78/149 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
T C C ++T G C+ C GY+G LP DC+PC C P + F+P C L G
Sbjct: 1396 TSVCQNCQHHTAGDFCERCALGYYGIVRGLPN-DCQPCAC--PLISPSNNFSPSC-VLEG 1451
Query: 91 ----QCSCKPH-VVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ P G C++C G+ S G C+ C+CDP GSL CDP+TG C C
Sbjct: 1452 LEDYRCTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYGSLPVPCDPVTGLCTC 1511
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMC 172
RPG TG +C+ C+ +G + +G + C
Sbjct: 1512 RPGATGRKCDGCE---HGHAREGAECVFC 1537
Score = 253 (94.1 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 55/156 (35%), Positives = 75/156 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD C GYF +G C C C G C+ TG
Sbjct: 945 SGQCW-CQPGVAGKKCDRCAHGYFN----FQEGGCTACDCSHLGNN--------CNPKTG 991
Query: 91 QCSCKPHVVGTNCDQC---EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
QC C P+ +G C +C GH +I++G CK C+C VGSL+ C+ TGQC C P
Sbjct: 992 QCICPPNTIGEKCSECLPNTWGH-SIVTG--CKVCNCSTVGSLSSQCNINTGQCSCHPKF 1048
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
+G +C C H+ + L C C C G+++ CD
Sbjct: 1049 SGMKCSECNRGHWNYPL--CSLCDCFLPGTDATTCD 1082
Score = 244 (91.0 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 58/164 (35%), Positives = 75/164 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C CLP +G ++ C+ C C G+L ++ C+ TG
Sbjct: 990 TGQCI-CPPNTIGEKCSECLPNTWGHSIVT---GCKVCNCSTVGSLSSQ-----CNINTG 1040
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT---------GQC 141
QCSC P G C +C GH+N C CDC G+ TCD T GQC
Sbjct: 1041 QCSCHPKFSGMKCSECNRGHWNYPL---CSLCDCFLPGTDATTCDSETRKCSCSDQTGQC 1097
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQC 182
C+ V G C+ C+P +G GC C C G S QC
Sbjct: 1098 TCKVNVEGVHCDRCRPGKFGLEAKNPLGCSSCYC--FGVTS-QC 1138
Score = 232 (86.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 53/162 (32%), Positives = 77/162 (47%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTL----- 76
K + G G C+ C +NT G C+TC+ G+F G + + P+ C+PC C G+L
Sbjct: 334 KYIGG--GVCINCTHNTAGINCETCIDGFFRPKGVSPSYPR-PCQPCHCDPAGSLSEVCI 390
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
+ E T G C CKP G NCD+C G+ C+ C+C +GS N+ DP
Sbjct: 391 KDEKHTRR-GLKPGSCYCKPGFGGMNCDRCVRGYRGY---PDCQPCNCSGLGSTNQ--DP 444
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPI 175
G C C+ V G C C+ + + GC+ C C +
Sbjct: 445 CIGPCSCKENVEGEDCSHCKFGFFNLQEENQKGCEECFCSGV 486
Score = 224 (83.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 71/223 (31%), Positives = 103/223 (46%)
Query: 1 MSLDV-HHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALA 59
+ +DV +S +++ V P+D +S+A C +C G C+ C P +
Sbjct: 655 LGMDVIFRLSSVNLESAVPYPTD--RSIASAVEVC-QCPPGYSGSSCEACWPRHRRVNGT 711
Query: 60 LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIIS--- 115
+ G CEPCQC+ G E C+ +TG+C SCK H G C++C G Y +
Sbjct: 712 IFGGLCEPCQCF--GHAEA------CNDVTGECLSCKDHTGGPYCNECLPGFYGDPTRGT 763
Query: 116 GEGCKSCDCD---PVGSLNRTC--DPITGQ-C-LCRPGVTGTRCELCQPNHYGF-SLDG- 166
E C+ C C P + + TC D G C C G TG RCE C ++G S+ G
Sbjct: 764 SEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPVGYTGPRCERCAEGYFGQPSIPGG 823
Query: 167 -CKPCMCDPIGSNSL--QCDP-SGQC----PGVFMNRAEMSSD 201
C+PC+C+ S+ CD SG C PG E+ +D
Sbjct: 824 SCQPCLCNDNLDFSIPGSCDSLSGSCLICKPGTTGRFCELCAD 866
Score = 217 (81.4 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 58/174 (33%), Positives = 80/174 (45%)
Query: 37 CIYNTGGPQCDTCLPGYF------GDALALPK-GDCEPCQCYIPGTLETETFTPVCDQLT 89
C G C+TC PG++ G P G C PCQC+ G + CD T
Sbjct: 1345 CPPGYSGLSCETCAPGFYRVHSEPGGRTPGPTLGTCVPCQCH--G------HSSQCDPET 1396
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDC---DPVGSLNRTCDPITG---- 139
C +C+ H G C++C +G+Y I+ G C+ C C P + + +C + G
Sbjct: 1397 SVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCACPLISPSNNFSPSC-VLEGLEDY 1455
Query: 140 QCL-CRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDPIGSNSLQCDP-SGQC 188
+C C G G CE C P + G S G C+ C CDP GS + CDP +G C
Sbjct: 1456 RCTACPRGYEGQYCERCAPGYAGSPSSPGGSCQECECDPYGSLPVPCDPVTGLC 1509
Score = 163 (62.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 43/124 (34%), Positives = 57/124 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT----LETETFTPVCD 86
TG C C G +C C G++ L C C C++PGT ++ET C
Sbjct: 1039 TGQC-SCHPKFSGMKCSECNRGHWNYPL------CSLCDCFLPGTDATTCDSETRKCSCS 1091
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR 144
TGQC+CK +V G +CD+C G + + + GC SC C V S C G L R
Sbjct: 1092 DQTGQCTCKVNVEGVHCDRCRPGKFGLEAKNPLGCSSCYCFGVTS---QCSEAKG--LVR 1146
Query: 145 PGVT 148
VT
Sbjct: 1147 TWVT 1150
Score = 152 (58.6 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNI--ISGE---GCKSCDCDPVGSLNRTC---DPIT-- 138
G C +C + G NC+ C G + +S C+ C CDP GSL+ C + T
Sbjct: 339 GVCINCTHNTAGINCETCIDGFFRPKGVSPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRR 398
Query: 139 ----GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C C+PG G C+ C + G+ C+PC C +GS + DP G C
Sbjct: 399 GLKPGSCYCKPGFGGMNCDRCVRGYRGYP--DCQPCNCSGLGSTNQ--DPCIGPC 449
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/127 (31%), Positives = 53/127 (41%)
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG----------CKSC 122
PG + +P+ + L +C C P G +C+ C G Y + S G C C
Sbjct: 1327 PG--QVSAASPLAN-LIERCDCPPGYSGLSCETCAPGFYRVHSEPGGRTPGPTLGTCVPC 1383
Query: 123 DCDPVGSLNRTCDPITGQCL-CRPGVTGTRCELCQPNHYGF--SL-DGCKPCMCDPIGSN 178
C S CDP T C C+ G CE C +YG L + C+PC C P+ S
Sbjct: 1384 QCHGHSS---QCDPETSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCAC-PLISP 1439
Query: 179 SLQCDPS 185
S PS
Sbjct: 1440 SNNFSPS 1446
Score = 128 (50.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 56/193 (29%), Positives = 78/193 (40%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALAL 60
V +SV + +C G A C +C +NT G CD C PG+ + L
Sbjct: 241 VKDISVGGMCICYGHARACPLDPATNKSRC-ECEHNTCGESCDRCCPGFHQKPWRAGTFL 299
Query: 61 PKGDCEPCQCYIPGTLETETF--TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG 118
K +CE C C+ G E + T L+ K ++ G C C +N +G
Sbjct: 300 TKTECEACNCH--GKAEECYYDETVASRNLSLNIHGK-YIGGGVCINCT---HNT-AGIN 352
Query: 119 CKSC-D--CDPVG---SLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP--C 170
C++C D P G S R C P C C P G+ E+C + + G KP C
Sbjct: 353 CETCIDGFFRPKGVSPSYPRPCQP----CHCDPA--GSLSEVCIKDEK-HTRRGLKPGSC 405
Query: 171 MCDPIGSNSLQCD 183
C P G + CD
Sbjct: 406 YCKP-GFGGMNCD 417
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 350 (128.3 bits), Expect = 5.8e-30, P = 5.8e-30
Identities = 73/187 (39%), Positives = 97/187 (51%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE 77
G P+ I TG C C+ +T GP C+ C PG++G+AL LP G+C C C GT E
Sbjct: 1977 GDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYGNAL-LP-GNCTRCDCSPCGT-E 2033
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
T CD +G+C CK V G CD+C G++ +GC+ C C P C P
Sbjct: 2034 T------CDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCRPCACGPAAK-GSECHPQ 2086
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFM 193
+GQC C+PG TG +C C P ++G GC+ C C P G CDP +G C PG+
Sbjct: 2087 SGQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC-PRG----HCDPHTGHCTCPPGLSG 2141
Query: 194 NRAEMSS 200
R + S
Sbjct: 2142 ERCDTCS 2148
Score = 295 (108.9 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 61/169 (36%), Positives = 82/169 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G QC+ C PG+ + P C C C P + + F C G
Sbjct: 1878 SGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPC--PLAVPSNNFADGCVLRNG 1935
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRT---CDPITGQCL- 142
QC C+P G +C++C G + ++ G C+ CDC G N CDP+TG C
Sbjct: 1936 RTQCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMIFSDCDPLTGACRG 1995
Query: 143 CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
C TG CE C P YG +L C C C P G+ + CDP SG+C
Sbjct: 1996 CLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSPCGTET--CDPQSGRC 2042
Score = 293 (108.2 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 61/147 (41%), Positives = 73/147 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C T P C C P FG P CE C C PG E P CD +G
Sbjct: 1500 TGQCI-CPPRTVPPDCLVCQPQSFG---CHPLVGCEECNCSGPGVQELTD--PTCDMDSG 1553
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G CD C G Y S C+ CDC G++ CDP+TGQC C+ V G+
Sbjct: 1554 QCRCRPNVAGRRCDTCAPGFYGYPS---CRPCDCHEAGTMASVCDPLTGQCHCKENVQGS 1610
Query: 151 RCELCQPNHYGFSLD-----GCKPCMC 172
RC+ C+ FSLD GC C C
Sbjct: 1611 RCDQCRVGT--FSLDAANPKGCTRCFC 1635
Score = 293 (108.2 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 70/189 (37%), Positives = 84/189 (44%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG 74
LC P+ L G C +C GP CD CLPGY G P DC C C G
Sbjct: 592 LCGCSPAGTLPEGCDEAGRC-QCRPGFDGPHCDRCLPGYHG----YP--DCHACACDPRG 644
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
L+ + C + G C C+P G C +C G Y S C C C GSL+ TC
Sbjct: 645 ALDQQ-----CG-VGGLCHCRPGYTGATCQECSPGFYGFPS---CIPCHCSADGSLHTTC 695
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG-SNSLQCDPSGQCPGVFM 193
DP TGQC CRP VTG C++C P Y F C+ C P G + + P Q P +
Sbjct: 696 DPTTGQCRCRPRVTGLHCDMCVPGAYNFPY--CEAGSCHPAGLAPANPALPETQAPCMCR 753
Query: 194 NRAEMSSDD 202
E S D
Sbjct: 754 AHVEGPSCD 762
Score = 284 (105.0 bits), Expect = 5.9e-23, P = 5.9e-23
Identities = 64/184 (34%), Positives = 80/184 (43%)
Query: 12 DILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
D C P L G G C C G C C PG++G P C PC C
Sbjct: 634 DCHACACDPRGALDQQCGVGGLC-HCRPGYTGATCQECSPGFYG----FPS--CIPCHCS 686
Query: 72 IPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVG--S 129
G+L T CD TGQC C+P V G +CD C G YN C++ C P G
Sbjct: 687 ADGSLHT-----TCDPTTGQCRCRPRVTGLHCDMCVPGAYNF---PYCEAGSCHPAGLAP 738
Query: 130 LNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGS--NSLQCDP 184
N C+CR V G C+ C+P ++G S +GC C CDP G+ +C
Sbjct: 739 ANPALPETQAPCMCRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQG 798
Query: 185 SGQC 188
+GQC
Sbjct: 799 NGQC 802
Score = 271 (100.5 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 57/150 (38%), Positives = 74/150 (49%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G C C GY+G P +C PC C G +CD+LTGQC C P V +
Sbjct: 1470 GRDCSRCATGYWG----FP--NCRPCDC---GAR-------LCDELTGQCICPPRTVPPD 1513
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVGS---LNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
C C+ + GC+ C+C G + TCD +GQC CRP V G RC+ C P
Sbjct: 1514 CLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGF 1573
Query: 160 YGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
YG+ C+PC C G+ + CDP +GQC
Sbjct: 1574 YGYP--SCRPCDCHEAGTMASVCDPLTGQC 1601
Score = 261 (96.9 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 54/133 (40%), Positives = 69/133 (51%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T C+ C + GP CD C PGY+G + + P+G C C C GTL T C Q
Sbjct: 746 TQAPCM-CRAHVEGPSCDRCKPGYWGLSASNPEG-CTRCSCDPRGTLGGVT---EC-QGN 799
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC CK HV G C C+ G + + + GC+SC CD G+L + C+P TG C CRP
Sbjct: 800 GQCFCKAHVCGKTCAACKDGFFGLDYADYFGCRSCRCDVGGALGQGCEPKTGACRCRPNT 859
Query: 148 TGTRCELCQPNHY 160
G C +HY
Sbjct: 860 QGPTCSEPAKDHY 872
Score = 251 (93.4 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 55/166 (33%), Positives = 77/166 (46%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C +C G CD C+PG + P CE C+ G P +
Sbjct: 698 TTGQC-RCRPRVTGLHCDMCVPGAYN----FPY--CEAGSCHPAGLAPAN---PALPETQ 747
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCD-PITGQCLCRPG 146
C C+ HV G +CD+C+ G++ + + EGC C CDP G+L + GQC C+
Sbjct: 748 APCMCRAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAH 807
Query: 147 VTGTRCELCQPNHYGFSL-D--GCKPCMCDPIGSNSLQCDP-SGQC 188
V G C C+ +G D GC+ C CD G+ C+P +G C
Sbjct: 808 VCGKTCAACKDGFFGLDYADYFGCRSCRCDVGGALGQGCEPKTGAC 853
Score = 244 (91.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 57/163 (34%), Positives = 73/163 (44%)
Query: 31 TGD-CLKCIYN-TGGPQCDTCLPGY-FGDAL--ALPKGDCEPCQCYIPGTLETETFTPVC 85
TG+ C C T P C LP + D LP G C C GT
Sbjct: 459 TGELCAACAEGYTDFPHCYP-LPSFPHNDTREQVLPAGQIVNCDCNAAGTQGNACRK--- 514
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
D G+C CKP+ G +C+ C G + G C C C G N CDP +GQC+CR
Sbjct: 515 DPRLGRCVCKPNFRGAHCELCAPGFH----GPSCHPCQCSSPGVANSLCDPESGQCMCRT 570
Query: 146 GVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
G G RC+ C ++ F L C+ C C P G+ CD +G+C
Sbjct: 571 GFEGDRCDHCALGYFHFPL--CQLCGCSPAGTLPEGCDEAGRC 611
Score = 240 (89.5 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 57/167 (34%), Positives = 79/167 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C G +CD CL GYFG +G C PC C P +E C +G
Sbjct: 2039 SGRCL-CKAGVTGQRCDRCLEGYFGFEQC--QG-CRPCACG-PAAKGSE-----CHPQSG 2088
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P G C +C G++ + +GC+ C C P G CDP TG C C PG++G
Sbjct: 2089 QCHCQPGTTGPQCLECAPGYWGLPE-KGCRRCQC-PRGH----CDPHTGHCTCPPGLSGE 2142
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAE 197
RC+ C H + G KP G + + C+ C + ++ E
Sbjct: 2143 RCDTCSQQHQ-VPVPG-KP------GGHGIHCEVCDHCVVLLLDDLE 2181
Score = 235 (87.8 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 48/127 (37%), Positives = 65/127 (51%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC C+ G + +P C+ GQC C+ HV+G +C +C G++ C+ CDC
Sbjct: 1442 PCGCHEVGAV-----SPTCEPFGGQCPCRGHVIGRDCSRCATGYWGF---PNCRPCDC-- 1491
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQ---C 182
G+ R CD +TGQC+C P C +CQP +G L GC+ C C G L C
Sbjct: 1492 -GA--RLCDELTGQCICPPRTVPPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTC 1548
Query: 183 D-PSGQC 188
D SGQC
Sbjct: 1549 DMDSGQC 1555
Score = 223 (83.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 63/192 (32%), Positives = 77/192 (40%)
Query: 18 GPPSDILKSVAGTTG--DCLKCIYNTGGP---QCDT-----CLPGYFGDALA-LPKG--- 63
GP D + + G G DC C + G QC C PGY G G
Sbjct: 619 GPHCD--RCLPGYHGYPDCHACACDPRGALDQQCGVGGLCHCRPGYTGATCQECSPGFYG 676
Query: 64 --DCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS 121
C PC C G+L T CD TGQC C+P V G +CD C G YN C++
Sbjct: 677 FPSCIPCHCSADGSLHT-----TCDPTTGQCRCRPRVTGLHCDMCVPGAYNF---PYCEA 728
Query: 122 CDCDPVG--SLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
C P G N C+CR V G C+ C+P ++G S +P G
Sbjct: 729 GSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGYWGLSAS-------NPEGCTR 781
Query: 180 LQCDPSGQCPGV 191
CDP G GV
Sbjct: 782 CSCDPRGTLGGV 793
Score = 220 (82.5 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 58/173 (33%), Positives = 74/173 (42%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C+ C N G C C PGY+ D L G C PCQC+ G + C +G C
Sbjct: 1832 CM-CPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQCH--GHSDR------CLPGSGICV 1882
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEG---CKSCDCD---PVGSLNRTCDPITG--QCLCR 144
C+ + G C++C G + C SC C P + C G QCLCR
Sbjct: 1883 GCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLAVPSNNFADGCVLRNGRTQCLCR 1942
Query: 145 PGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQCPG 190
PG G CE C P +G L C+PC C G ++ CDP +G C G
Sbjct: 1943 PGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMIFSDCDPLTGACRG 1995
Score = 165 (63.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 55/174 (31%), Positives = 75/174 (43%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C ++T G C+ CLPG+F L P C PC C E++ C+ L
Sbjct: 396 GVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHV-CRPCDC------ESDFTDGTCEDL 448
Query: 89 TGQCSCKPHVVGTNCDQCEVGH------YNIISGEGCKSCD-CDPVGSL-NRTCDPITGQ 140
TG+C C+P+ G C C G+ Y + S + + P G + N C+ Q
Sbjct: 449 TGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQ 508
Query: 141 C-LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC--PGV 191
CR RC +C+PN G + C P G + C P QC PGV
Sbjct: 509 GNACRKDPRLGRC-VCKPNFRGAHCELCAP------GFHGPSCHPC-QCSSPGV 554
Score = 154 (59.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 36/113 (31%), Positives = 49/113 (43%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C C+ H G NC++C G + + S C+ CDC+ + TC+ +TG+C C
Sbjct: 396 GVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPCDCES-DFTDGTCEDLTGRCYC 454
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRA 196
RP TG C C + F C P P Q P+GQ N A
Sbjct: 455 RPNFTGELCAACAEGYTDFP--HCYPLPSFPHNDTREQVLPAGQIVNCDCNAA 505
Score = 142 (55.0 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 29/78 (37%), Positives = 40/78 (51%)
Query: 112 NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM 171
++ G C C VG+++ TC+P GQC CR V G C C ++GF C+PC
Sbjct: 1433 SLFYNNGALPCGCHEVGAVSPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFP--NCRPCD 1490
Query: 172 CDPIGSNSLQCDP-SGQC 188
C G+ CD +GQC
Sbjct: 1491 C---GARL--CDELTGQC 1503
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 349 (127.9 bits), Expect = 6.1e-30, P = 6.1e-30
Identities = 64/159 (40%), Positives = 92/159 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C T G C+ C GYFGDA+ +C+PC+C I G+ F+ C TG
Sbjct: 879 SGSCLICKPGTTGRYCELCADGYFGDAVNTK--NCQPCRCDINGS-----FSEDCHTRTG 931
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C+P+V G +CD+C+ + + G GC C+C+ GS + C+ +GQC C+PGV G
Sbjct: 932 QCECRPNVQGRHCDECKPETFGLQLGRGCLPCNCNSFGSKSFDCEA-SGQCWCQPGVAGK 990
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C ++ F GC C C +G+N CDP +GQC
Sbjct: 991 KCDRCAHGYFNFQEGGCIACDCSHLGNN---CDPKTGQC 1026
Score = 331 (121.6 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 66/170 (38%), Positives = 95/170 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
TG+CL C +TGGP C+ CLPG++GD DC+PC C P + + F+P C D+
Sbjct: 766 TGECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCAC--PLNIPSNNFSPTCHLDRS 823
Query: 89 TGQ-CS-CKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC-DPVG-SLNRTCDPITGQCL 142
G C C G C++C G++ + G C+ C C D + S+ +CD ++G CL
Sbjct: 824 LGLICDECPIGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDYSIPGSCDSLSGSCL 883
Query: 143 -CRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDP-SGQC 188
C+PG TG CELC ++G +++ C+PC CD GS S C +GQC
Sbjct: 884 ICKPGTTGRYCELCADGYFGDAVNTKNCQPCRCDINGSFSEDCHTRTGQC 933
Score = 258 (95.9 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 53/136 (38%), Positives = 71/136 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
T C C ++T G C+ C GY+G LP DC+PC C P + F+P C L G
Sbjct: 1429 TSVCQNCQHHTAGDFCERCALGYYGIVRGLPN-DCQPCAC--PLISPSNNFSPSC-VLEG 1484
Query: 91 ----QCSCKPH-VVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ P G C++C G+ S G C+ C+CDP GSL CD +TG C C
Sbjct: 1485 LEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECECDPYGSLPVPCDRVTGLCTC 1544
Query: 144 RPGVTGTRCELCQPNH 159
RPG TG +C+ C+ H
Sbjct: 1545 RPGATGRKCDGCEHWH 1560
Score = 250 (93.1 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 56/156 (35%), Positives = 73/156 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD C GYF +G C C C G CD TG
Sbjct: 978 SGQCW-CQPGVAGKKCDRCAHGYFN----FQEGGCIACDCSHLGNN--------CDPKTG 1024
Query: 91 QCSCKPHVVGTNCDQC---EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
QC C P+ G C +C GH +I++G CK C+C VGSL C+ TGQC C P
Sbjct: 1025 QCICPPNTTGEKCSECLPNTWGH-SIVTG--CKVCNCSTVGSLASQCNVNTGQCSCHPKF 1081
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
+G +C C H+ + L C C C G+++ CD
Sbjct: 1082 SGMKCSECSRGHWNYPL--CTLCDCFLPGTDATTCD 1115
Score = 244 (91.0 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 58/164 (35%), Positives = 75/164 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C NT G +C CLP +G ++ C+ C C G+L ++ C+ TG
Sbjct: 1023 TGQCI-CPPNTTGEKCSECLPNTWGHSIVT---GCKVCNCSTVGSLASQ-----CNVNTG 1073
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD---------PITGQC 141
QCSC P G C +C GH+N C CDC G+ TCD TGQC
Sbjct: 1074 QCSCHPKFSGMKCSECSRGHWNYPL---CTLCDCFLPGTDATTCDLETRKCSCSDQTGQC 1130
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQC 182
C+ V G C+ C+P +G GC C C G S QC
Sbjct: 1131 SCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYC--FGVTS-QC 1171
Score = 238 (88.8 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 55/168 (32%), Positives = 78/168 (46%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTL----- 76
K + G G C+ C +NT G C+TC+ G+F G + P+ C+PC C G+L
Sbjct: 367 KYIGG--GVCINCTHNTAGINCETCVDGFFRPKGVSPNYPR-PCQPCHCDPTGSLSEVCV 423
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
+ E + G C CK G NCD+C G++ C+ C+C +GS N DP
Sbjct: 424 KDEKYAQR-GLKPGSCHCKTGFGGVNCDRCVRGYHGY---PDCQPCNCSGLGSTNE--DP 477
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQ 181
G C C+ V G C C+ + D GC+ C C + SN Q
Sbjct: 478 CVGPCSCKENVEGEDCSRCKSGFFNLQEDNQKGCEECFCSGV-SNRCQ 524
Score = 217 (81.4 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 69/223 (30%), Positives = 100/223 (44%)
Query: 1 MSLD-VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALA 59
+ +D + +S +++ V P+D + +A C +C G C+TC P +
Sbjct: 688 LGMDAIFRLSSVNLESPVPYPTD--RRIATDVEVC-QCPPGYSGSSCETCWPRHRRVNGT 744
Query: 60 LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNII---S 115
+ G CEPCQC+ CD +TG+C +CK H G C++C G Y S
Sbjct: 745 IFGGICEPCQCF--------AHAEACDDITGECLNCKDHTGGPYCNECLPGFYGDPTRGS 796
Query: 116 GEGCKSCDCD---PVGSLNRTC--DPITGQ-C-LCRPGVTGTRCELCQPNHYGF-SLDG- 166
E C+ C C P + + TC D G C C G TG RCE C ++G S+ G
Sbjct: 797 PEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPIGYTGPRCERCAEGYFGQPSVPGG 856
Query: 167 -CKPCMCDPIGSNSL--QCDP-SGQC----PGVFMNRAEMSSD 201
C+PC C+ S+ CD SG C PG E+ +D
Sbjct: 857 SCQPCQCNDNLDYSIPGSCDSLSGSCLICKPGTTGRYCELCAD 899
Score = 207 (77.9 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 63/208 (30%), Positives = 88/208 (42%)
Query: 5 VHHVSVMDILLCVGPPSDILKSV--AGTTGDCLKCIYNTGGPQCDTCLPGYF------GD 56
V + +I + V P +L A C C G C+TC PG++ G
Sbjct: 1345 VRQSRISEISMEVAEPGHVLAGSPPAHLIERC-DCPPGYSGLSCETCAPGFYRLRSEPGG 1403
Query: 57 ALALPK-GDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNII 114
P G C PCQC + CD T C +C+ H G C++C +G+Y I+
Sbjct: 1404 RTPGPTLGTCVPCQC--------NGHSSQCDPETSVCQNCQHHTAGDFCERCALGYYGIV 1455
Query: 115 SG--EGCKSCDC---DPVGSLNRTCDPITG----QCL-CRPGVTGTRCELCQPNHYGF-S 163
G C+ C C P + + +C + G +C C G G CE C P + G S
Sbjct: 1456 RGLPNDCQPCACPLISPSNNFSPSC-VLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPS 1514
Query: 164 LDG--CKPCMCDPIGSNSLQCDP-SGQC 188
G C+ C CDP GS + CD +G C
Sbjct: 1515 SPGGSCQECECDPYGSLPVPCDRVTGLC 1542
Score = 164 (62.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 45/124 (36%), Positives = 56/124 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET----ETFTPVCD 86
TG C C G +C C G++ L C C C++PGT T ET C
Sbjct: 1072 TGQC-SCHPKFSGMKCSECSRGHWNYPL------CTLCDCFLPGTDATTCDLETRKCSCS 1124
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR 144
TGQCSCK +V G +CD+C G + + + GC SC C V S C G L R
Sbjct: 1125 DQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCYCFGVTS---QCSEAKG--LIR 1179
Query: 145 PGVT 148
VT
Sbjct: 1180 TWVT 1183
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 57/193 (29%), Positives = 80/193 (41%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALAL 60
V +SV + +C G A C +C +NT G CD C PG+ + L
Sbjct: 274 VKDISVGGMCICYGHARACPLDPATNKSRC-ECEHNTCGESCDRCCPGFHQKPWRAGTFL 332
Query: 61 PKGDCEPCQCYIPGTLETETF--TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG 118
K +CE C C+ G E + T L+ K ++ G C C +N +G
Sbjct: 333 TKSECEACNCH--GKAEECYYDETVASRNLSLNIHGK-YIGGGVCINCT---HNT-AGIN 385
Query: 119 CKSC-D--CDPVG-SLN--RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP--C 170
C++C D P G S N R C P C C P TG+ E+C + ++ G KP C
Sbjct: 386 CETCVDGFFRPKGVSPNYPRPCQP----CHCDP--TGSLSEVCVKDEK-YAQRGLKPGSC 438
Query: 171 MCDPIGSNSLQCD 183
C G + CD
Sbjct: 439 HCKT-GFGGVNCD 450
Score = 60 (26.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
RC+ C P + G S + C P G L+ +P G+ PG
Sbjct: 1375 RCD-CPPGYSGLSCETCAP------GFYRLRSEPGGRTPG 1407
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 344 (126.2 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 68/168 (40%), Positives = 89/168 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE---TFTPVCDQ 87
+G CL C+Y+T GP+C C PG+ G A + C C C + GT + T CD
Sbjct: 1008 SGQCLHCLYHTEGPRCAHCKPGFHGQAA---RQSCHRCTCNLLGTDARQCPSTDHCNCDP 1064
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+GQC C P+V G +CD+C +N+ SG GC+ C C P + C+ TGQC CR G
Sbjct: 1065 SSGQCPCLPNVQGLSCDRCAPNFWNLTSGRGCQPCACHPSRARGPACNEFTGQCHCRAGF 1124
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGV 191
G C CQ H+G C+ C CDP G ++ QC S G C PGV
Sbjct: 1125 GGRTCSECQELHWGDPGLQCRACDCDPRGIDTPQCHRSTGHCSCRPGV 1172
Score = 308 (113.5 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 68/177 (38%), Positives = 92/177 (51%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFT 82
+V+G G C C +NT G QC+ C P ++ D L P C C C G+ +
Sbjct: 372 NVSG--GVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDP-AVCRSCDCDPMGSQDGGRCD 428
Query: 83 PVCDQ----LTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTC 134
P D ++GQC CK HVVG+ C QC G + + + GC+ C CDP G++ C
Sbjct: 429 PHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSANNPLGCQRCQCDPRGTVPGGTPC 488
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQC-DPSGQC 188
D +G C C+ VTG C C P H+G S D GC+PC CD G+ QC + +GQC
Sbjct: 489 DRNSGACFCKRLVTGQGCNRCLPGHWGLSHDLLGCRPCDCDIGGALDPQCNEATGQC 545
Score = 286 (105.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 58/145 (40%), Positives = 77/145 (53%)
Query: 47 DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQC 106
+ C P + L G PCQC G+L +E C+ GQC CKP VVG CD C
Sbjct: 767 EACAPLLISLSTLLYNGAL-PCQCDPQGSLSSE-----CNPHGGQCRCKPAVVGRRCDLC 820
Query: 107 EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDG 166
G+Y GC++C C P G+L+ CD +GQC CR G G RC+ CQ +GF
Sbjct: 821 APGYYGF-GPTGCQACQCSPEGALSGLCDATSGQCPCRAGAFGLRCDRCQRGQWGFP--S 877
Query: 167 CKPCMCDPIGSNSLQCDPS-GQCPG 190
C+PC+C ++ +CDP+ G C G
Sbjct: 878 CRPCVCH---GHADECDPNTGTCLG 899
Score = 271 (100.5 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 62/172 (36%), Positives = 86/172 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYI-PGTLETETFTPVC--D 86
TG CL C +TGG C+ C+ G+ GD LP G C PC C PG+ F C D
Sbjct: 894 TGTCLGCRDHTGGEHCERCIAGFHGDP-RLPYGGQCRPCPCPEGPGS--RRHFATSCHRD 950
Query: 87 QLTGQ--CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRT----CDPIT 138
+ Q C C+ G C+ C GH+ S G GC+ C+C G+++ T CDP +
Sbjct: 951 GYSQQVVCHCRAGYTGLRCEACAPGHFGDPSRPGGGCQPCECS--GNIDPTDPDACDPHS 1008
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
GQCL C G RC C+P +G + C C C+ +G+++ QC + C
Sbjct: 1009 GQCLHCLYHTEGPRCAHCKPGFHGQAARQSCHRCTCNLLGTDARQCPSTDHC 1060
Score = 262 (97.3 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 52/141 (36%), Positives = 70/141 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
++G C C+ N G CD C P ++ L +G C+PC C+ P P C++ T
Sbjct: 1065 SSGQC-PCLPNVQGLSCDRCAPNFWN--LTSGRG-CQPCACH-PSRARG----PACNEFT 1115
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+ G C +C+ H+ G C++CDCDP G C TG C CRPGV+G
Sbjct: 1116 GQCHCRAGFGGRTCSECQELHWGD-PGLQCRACDCDPRGIDTPQCHRSTGHCSCRPGVSG 1174
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C G C PC
Sbjct: 1175 VRCDQCARGFSGV-FPTCHPC 1194
Score = 261 (96.9 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 54/136 (39%), Positives = 75/136 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C + G +C C G+FG + P G C+ CQC GT+ T P CD+ +G
Sbjct: 439 SGQC-RCKEHVVGSRCQQCRDGFFGLSANNPLG-CQRCQCDPRGTVPGGT--P-CDRNSG 493
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK V G C++C GH+ + GC+ CDCD G+L+ C+ TGQC CR + G
Sbjct: 494 ACFCKRLVTGQGCNRCLPGHWGLSHDLLGCRPCDCDIGGALDPQCNEATGQCRCRQHMVG 553
Query: 150 TRCELCQPNHYGFSLD 165
RCE QP ++ LD
Sbjct: 554 RRCEQVQPGYFRPFLD 569
Score = 239 (89.2 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 61/171 (35%), Positives = 76/171 (44%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P L S G +C G +CD C PGY+G P G C+ CQC
Sbjct: 785 LPCQCDPQGSLSSECNPHGGQCRCKPAVVGRRCDLCAPGYYGFG---PTG-CQACQCSPE 840
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G L + +CD +GQC C+ G CD+C+ G + S C+ C C G +
Sbjct: 841 GAL-----SGLCDATSGQCPCRAGAFGLRCDRCQRGQWGFPS---CRPCVCH--GHADE- 889
Query: 134 CDPITGQCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMCDPIGSNS 179
CDP TG CL CR G CE C +G G C+PC C P G S
Sbjct: 890 CDPNTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPC-PEGPGS 939
Score = 201 (75.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 55/184 (29%), Positives = 83/184 (45%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGTLETETFTPVCD 86
G C+ C +NT G C+ C ++ D P D C+ C+C+ G + F
Sbjct: 312 GACV-CKHNTRGLNCEQC-QDFYHDLPWHPAEDRHSHACKKCECH--GHAHSCHFDMAIY 367
Query: 87 QLTGQCS------CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNR-TC 134
+G S C+ + G C+ C Y ++ C+SCDCDP+GS + C
Sbjct: 368 LASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRC 427
Query: 135 DP--------ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
DP ++GQC C+ V G+RC+ C+ +G S + +P+G QCDP G
Sbjct: 428 DPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSAN-------NPLGCQRCQCDPRG 480
Query: 187 QCPG 190
PG
Sbjct: 481 TVPG 484
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C CDP GSL+ C+P GQC C+P V G RC+LC P +YGF GC+ C
Sbjct: 783 GALPCQCDPQGSLSSECNPHGGQCRCKPAVVGRRCDLCAPGYYGFGPTGCQAC------- 835
Query: 178 NSLQCDPSGQCPGV 191
QC P G G+
Sbjct: 836 ---QCSPEGALSGL 846
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 343 (125.8 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 67/168 (39%), Positives = 89/168 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV---CDQ 87
TG CL+C+++T GP C C PG+ G A + C C C + GT + +P CD
Sbjct: 1004 TGQCLRCLHHTEGPHCAHCKPGFHGQAA---RQSCHRCTCNLLGTNPQQCPSPDQCHCDP 1060
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+GQC C P+V G +CD+C +N+ SG GC+ C C P + TC+ TGQC CR G
Sbjct: 1061 SSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSRARGPTCNEFTGQCHCRAGF 1120
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
G C CQ H+G C C CD G ++ QC +G C PGV
Sbjct: 1121 GGRTCSECQELHWGDPGLQCHACDCDSRGIDTPQCHRFTGHCSCRPGV 1168
Score = 312 (114.9 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 68/177 (38%), Positives = 95/177 (53%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL------ALPKG-DCEPCQCYIPGTLET 78
+V+G G C C +NT G C+ C P ++ D A+ + DC+P G ++
Sbjct: 368 NVSG--GVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRCDS 425
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI-ISGE-GCKSCDCDPVGSL--NRTC 134
P ++GQC CK HVVGT C QC G + + IS GC+ C C+ G++ + C
Sbjct: 426 HD-DPALGLVSGQCRCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVPGSTPC 484
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQCDP-SGQC 188
DP +G C C+ VTG C+ C P H+G S D GC+PC CD G+ QCD +GQC
Sbjct: 485 DPNSGSCYCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEGTGQC 541
Score = 269 (99.8 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 63/172 (36%), Positives = 82/172 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYI-PGTLETETFTPVC--D 86
TG CL C +TGG C+ C+ G+ GD LP G C PC C PG+ F C D
Sbjct: 890 TGACLGCRDHTGGEHCERCIAGFHGDP-RLPYGGQCRPCPCPEGPGS--QRHFATSCHQD 946
Query: 87 QLTGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDC----DPVGSLNRTCDPIT 138
+ + Q C C+ G C+ C GH+ S G C+ C+C DP+ CDP T
Sbjct: 947 EYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDP--DACDPHT 1004
Query: 139 GQCL-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
GQCL C G C C+P +G + C C C+ +G+N QC QC
Sbjct: 1005 GQCLRCLHHTEGPHCAHCKPGFHGQAARQSCHRCTCNLLGTNPQQCPSPDQC 1056
Score = 268 (99.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 51/125 (40%), Positives = 71/125 (56%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PCQC G+L +E C+ GQC CKP VVG CD C G+Y GC++C C
Sbjct: 782 PCQCNPQGSLSSE-----CNPHGGQCLCKPGVVGRRCDLCAPGYYGF-GPTGCQACQCSH 835
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
G+L+ C+ +GQCLCR G G RC+ CQ +GF C+PC+C+ ++ +C+ +
Sbjct: 836 EGALSSLCEKTSGQCLCRTGAFGLRCDRCQRGQWGFP--SCRPCVCN---GHADECNTHT 890
Query: 186 GQCPG 190
G C G
Sbjct: 891 GACLG 895
Score = 266 (98.7 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
Identities = 55/136 (40%), Positives = 74/136 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C + G +C C G+FG +++ G C CQC GT+ T P CD +G
Sbjct: 435 SGQC-RCKEHVVGTRCQQCRDGFFGLSISDRLG-CRRCQCNARGTVPGST--P-CDPNSG 489
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK V G CD+C GH+ + GC+ CDCD G+L+ CD TGQC CR + G
Sbjct: 490 SCYCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCDEGTGQCHCRQHMVG 549
Query: 150 TRCELCQPNHYGFSLD 165
RCE QP ++ LD
Sbjct: 550 RRCEQVQPGYFRPFLD 565
Score = 263 (97.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 52/141 (36%), Positives = 68/141 (48%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
++G C C+ N GP CD C P ++ L G C+PC C+ P P C++ T
Sbjct: 1061 SSGQC-PCLPNVQGPSCDRCAPNFWN--LTSGHG-CQPCACH-PSRARG----PTCNEFT 1111
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+ G C +C+ H+ G C +CDCD G C TG C CRPGV+G
Sbjct: 1112 GQCHCRAGFGGRTCSECQELHWGD-PGLQCHACDCDSRGIDTPQCHRFTGHCSCRPGVSG 1170
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C G C PC
Sbjct: 1171 VRCDQCARGFSGI-FPACHPC 1190
Score = 226 (84.6 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 60/172 (34%), Positives = 78/172 (45%)
Query: 14 LLCVGPPSDILKSVAGTTG-DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
L C P L S G CL C G +CD C PGY+G P G C+ CQC
Sbjct: 781 LPCQCNPQGSLSSECNPHGGQCL-CKPGVVGRRCDLCAPGYYGFG---PTG-CQACQCSH 835
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNR 132
G L + +C++ +GQC C+ G CD+C+ G + S C+ C C+ G +
Sbjct: 836 EGALSS-----LCEKTSGQCLCRTGAFGLRCDRCQRGQWGFPS---CRPCVCN--GHADE 885
Query: 133 TCDPITGQCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMCDPIGSNS 179
C+ TG CL CR G CE C +G G C+PC C P G S
Sbjct: 886 -CNTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPC-PEGPGS 935
Score = 218 (81.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 37/72 (51%), Positives = 46/72 (63%)
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
G C C+P GSL+ C+P GQCLC+PGV G RC+LC P +YGF GC+ C C G+
Sbjct: 779 GALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEGA 838
Query: 178 NSLQCDP-SGQC 188
S C+ SGQC
Sbjct: 839 LSSLCEKTSGQC 850
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/181 (25%), Positives = 73/181 (40%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGTLETETFTPVCD 86
G C+ C +NT G C+ C ++ D P D C C+C+ G + F
Sbjct: 308 GACI-CKHNTRGLNCEQC-QDFYRDLPWRPAEDGHSHACRKCECH--GHTHSCHFDMAVY 363
Query: 87 QLTGQCS------CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNR-TC 134
+G S C+ + G +C+ C Y ++ C+SCDCDP+GS + C
Sbjct: 364 LASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPAVCRSCDCDPMGSQDGGRC 423
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP-----CMCDPIGSNSLQCDPSGQCP 189
D L G+ +C C+ + G C+ + D +G QC+ G P
Sbjct: 424 DSHDDPAL---GLVSGQCR-CKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVP 479
Query: 190 G 190
G
Sbjct: 480 G 480
Score = 85 (35.0 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 153 ELCQPNHYGFSL---DGCKPCMCDPIGSNSLQCDP-SGQC---PGVFMNRAEM 198
E C P S +G PC C+P GS S +C+P GQC PGV R ++
Sbjct: 763 EACAPLLISLSTLIYNGALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDL 815
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 341 (125.1 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 67/170 (39%), Positives = 87/170 (51%)
Query: 20 PSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
P+ I TG CL C +T G C+ C PG++GDA++ DC+ CQC GT
Sbjct: 163 PNLIFNECHNVTGKCLNCWGDTAGDNCERCAPGFYGDAISAK--DCQECQCNKCGTAS-- 218
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG 139
CD +G C CKP V G CD+CE GH + GC+ C+C +L TC P+T
Sbjct: 219 -----CDDRSGVCHCKPGVTGQLCDRCEDGHSGFCTCMGCRRCECASA-ALRATCHPLTH 272
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
C CRPG G CE C P + +S GC+ C C N CD +G+C
Sbjct: 273 SCQCRPGAGGRYCERCLPGFWDYSPSGCRKCDCPE--EN---CDLHTGEC 317
Score = 247 (92.0 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 65/178 (36%), Positives = 84/178 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQL 88
TG C+ C +T G C+ C + + LP G C PC C P +LE+ F CD+
Sbjct: 62 TGICIDCRDHTLGDFCELCEDRFL--PVFLPDGTFMCRPCAC--PLSLESNNFAAHCDR- 116
Query: 89 TGQ---CSCKPHVVGTNCDQCEVGHY-NIIS-GEGCKSCDC----DPVGSLNRTCDPITG 139
G+ C C+ G C++C G+Y N + G CK CDC DP N C +TG
Sbjct: 117 RGEFLRCVCQDGYAGHYCERCAPGYYGNPMELGNSCKKCDCNGNSDPNLIFNE-CHNVTG 175
Query: 140 QCL-CRPGVTGTRCELCQPNHYG--FSLDGCKPCMCDPIGSNSLQCDPSGQC---PGV 191
+CL C G CE C P YG S C+ C C+ G+ S D SG C PGV
Sbjct: 176 KCLNCWGDTAGDNCERCAPGFYGDAISAKDCQECQCNKCGTASCD-DRSGVCHCKPGV 232
Score = 153 (58.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 47/157 (29%), Positives = 72/157 (45%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C GYF L+ + C PC C G ++ C+ +TG C C+ H +G C+ CE
Sbjct: 34 CARGYF---LS-DQETCLPCNC--KGHADS------CEDITGICIDCRDHTLGDFCELCE 81
Query: 108 VGHYNIISGEG---CKSCDCD-PVGSLNRT--CDPITGQ---CLCRPGVTGTRCELCQPN 158
+ +G C+ C C + S N CD G+ C+C+ G G CE C P
Sbjct: 82 DRFLPVFLPDGTFMCRPCACPLSLESNNFAAHCDR-RGEFLRCVCQDGYAGHYCERCAPG 140
Query: 159 HYGFSLD---GCKPCMCDPIGSNSL---QC-DPSGQC 188
+YG ++ CK C C+ +L +C + +G+C
Sbjct: 141 YYGNPMELGNSCKKCDCNGNSDPNLIFNECHNVTGKC 177
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/137 (30%), Positives = 55/137 (40%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G CD C G+ G + C C+C + C LT
Sbjct: 223 SGVC-HCKPGVTGQLCDRCEDGHSGFCTCM---GCRRCEC------ASAALRATCHPLTH 272
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C C+P G C++C G ++ S GC+ CDC P CD TG+CL P
Sbjct: 273 SCQCRPGAGGRYCERCLPGFWDY-SPSGCRKCDC-P----EENCDLHTGECL--P----- 319
Query: 151 RCELCQPNHYGFSLDGC 167
EL Q + S D C
Sbjct: 320 --ELSQISECNISCDAC 334
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 338 (124.0 bits), Expect = 2.4e-29, P = 2.4e-29
Identities = 69/164 (42%), Positives = 85/164 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C G +CD C PG+ G A PKG C C C I G + P C++ TG
Sbjct: 393 TGQCV-CKEYVQGERCDLCKPGFTGLTFANPKG-CHACDCSILGARKD---MP-CEEETG 446
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C P+VVG CDQC H+ + SG GC+ C CDP SL+ C+ TGQC CR G G
Sbjct: 447 RCLCLPNVVGPKCDQCAPSHWKLASGLGCEPCACDPRNSLSSQCNQFTGQCPCREGFGGL 506
Query: 151 RCEL-----CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C C YG GC+ C CD G+ CD SG+C
Sbjct: 507 TCSSAAIRQCPDQTYGHVATGCRACDCDFRGTEGPGCDKASGRC 550
Score = 326 (119.8 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 69/182 (37%), Positives = 100/182 (54%)
Query: 16 CVGPPSDILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDAL-ALPKGD-CEPCQCYI 72
C P+ + + GT G C C +T G C+ C YF + + P + C PC+C
Sbjct: 322 CHFDPA-VFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNRRPSAPIHETCIPCECDP 380
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL 130
G ++ P CD+LTGQC CK +V G CD C+ G + + +GC +CDC +G+
Sbjct: 381 DGAVQG---AP-CDRLTGQCVCKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSILGAR 436
Query: 131 -NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDP-SGQ 187
+ C+ TG+CLC P V G +C+ C P+H+ + GC+PC CDP S S QC+ +GQ
Sbjct: 437 KDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGLGCEPCACDPRNSLSSQCNQFTGQ 496
Query: 188 CP 189
CP
Sbjct: 497 CP 498
Score = 267 (99.0 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 56/134 (41%), Positives = 73/134 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C+ N GP+CD C P ++ LA G CEPC C +L ++ C+Q TG
Sbjct: 445 TGRCL-CLPNVVGPKCDQCAPSHW--KLASGLG-CEPCACDPRNSLSSQ-----CNQFTG 495
Query: 91 QCSCKPHVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
QC C+ G C QC Y ++ GC++CDCD G+ CD +G+CLCRP
Sbjct: 496 QCPCREGFGGLTCSSAAIRQCPDQTYGHVA-TGCRACDCDFRGTEGPGCDKASGRCLCRP 554
Query: 146 GVTGTRCELCQPNH 159
G TG RC+ CQ H
Sbjct: 555 GFTGPRCDQCQRGH 568
Score = 261 (96.9 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 63/175 (36%), Positives = 88/175 (50%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQ-CYIPGTLETETFTPV---CDQL 88
C+ C +NT GP CD C P Y +G D CQ C G ET F P Q
Sbjct: 276 CV-CQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQRCDCNGHSETCHFDPAVFAASQG 334
Query: 89 T--GQC-SCKPHVVGTNCDQCEVGHY------NIISGEGCKSCDCDPVGSLNRT-CDPIT 138
T G C +C+ H G NC++C++ HY + E C C+CDP G++ CD +T
Sbjct: 335 TNGGVCDNCRDHTEGKNCERCQL-HYFRNRRPSAPIHETCIPCECDPDGAVQGAPCDRLT 393
Query: 139 GQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNS-LQCDP-SGQC 188
GQC+C+ V G RC+LC+P G + GC C C +G+ + C+ +G+C
Sbjct: 394 GQCVCKEYVQGERCDLCKPGFTGLTFANPKGCHACDCSILGARKDMPCEEETGRC 448
Score = 238 (88.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 54/142 (38%), Positives = 71/142 (50%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C+ N GP+CD C P ++ LA G CEPC C +L ++ C+Q TGQC C+
Sbjct: 450 CLPNVVGPKCDQCAPSHW--KLASGLG-CEPCACDPRNSLSSQ-----CNQFTGQCPCRE 501
Query: 97 HVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
G C QC Y ++ GC++CDCD G+ CD +G+CLCRPG TG R
Sbjct: 502 GFGGLTCSSAAIRQCPDQTYGHVA-TGCRACDCDFRGTEGPGCDKASGRCLCRPGFTGPR 560
Query: 152 CELCQPNHYGFSLDGCKPCMCD 173
C+ CQ H CD
Sbjct: 561 CDQCQRGH------------CD 570
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 336 (123.3 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 70/170 (41%), Positives = 90/170 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C + G +CD C PG+ G A P+G C C C I G+ P CD+ +G
Sbjct: 396 TGQCV-CKEHVQGERCDLCKPGFTGLTYANPQG-CHRCDCNILGSRRD---MP-CDEESG 449
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C C P+VVG CDQC H+ + SG+GC+ C CDP SL+ C+ TGQC CR G G
Sbjct: 450 RCLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSLSPQCNQFTGQCPCREGFGGL 509
Query: 151 RCEL-----CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
C C YG GC+ C CD G+ CD SG+C PG+
Sbjct: 510 MCSAAAIRQCPDRTYGDVATGCRACDCDFRGTEGPGCDKASGRCLCRPGL 559
Score = 315 (115.9 bits), Expect = 6.9e-27, P = 6.9e-27
Identities = 69/181 (38%), Positives = 92/181 (50%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDAL--ALPKGDCEPCQCYIP 73
C P+ S G C C +T G C+ C YF + A + C C+C
Sbjct: 325 CHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNRRPGASIQETCISCECDPD 384
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL- 130
G + P CD +TGQC CK HV G CD C+ G + + +GC CDC+ +GS
Sbjct: 385 GAVPG---AP-CDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRR 440
Query: 131 NRTCDPITGQCLCRPGVTGTRCELCQPNHYGF-SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+ CD +G+CLC P V G +C+ C P H+ S GC+PC CDP S S QC+ +GQC
Sbjct: 441 DMPCDEESGRCLCLPNVVGPKCDQCAPYHWKLASGQGCEPCACDPHNSLSPQCNQFTGQC 500
Query: 189 P 189
P
Sbjct: 501 P 501
Score = 288 (106.4 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 69/183 (37%), Positives = 92/183 (50%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQ-CYIPGTLETETFTP 83
S A D C +NT GP C+ C P Y +G D CQ C G ET F P
Sbjct: 270 STAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEGQDAHECQRCDCNGHSETCHFDP 329
Query: 84 VCDQLT-----GQC-SCKPHVVGTNCDQCEVGHY--NIISG----EGCKSCDCDPVGSL- 130
+ G C +C+ H G NC++C++ HY N G E C SC+CDP G++
Sbjct: 330 AVFAASQGAYGGVCDNCRDHTEGKNCERCQL-HYFRNRRPGASIQETCISCECDPDGAVP 388
Query: 131 NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSN-SLQCDP-S 185
CDP+TGQC+C+ V G RC+LC+P G + GC C C+ +GS + CD S
Sbjct: 389 GAPCDPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQGCHRCDCNILGSRRDMPCDEES 448
Query: 186 GQC 188
G+C
Sbjct: 449 GRC 451
Score = 270 (100.1 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 60/148 (40%), Positives = 80/148 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C+ N GP+CD C P ++ LA +G CEPC C +L +P C+Q TG
Sbjct: 448 SGRCL-CLPNVVGPKCDQCAPYHW--KLASGQG-CEPCACDPHNSL-----SPQCNQFTG 498
Query: 91 QCSCKPHVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
QC C+ G C QC Y ++ GC++CDCD G+ CD +G+CLCRP
Sbjct: 499 QCPCREGFGGLMCSAAAIRQCPDRTYGDVA-TGCRACDCDFRGTEGPGCDKASGRCLCRP 557
Query: 146 GVTGTRCELCQP---NHYGFSLDGCKPC 170
G+TG RC+ CQ N Y + C PC
Sbjct: 558 GLTGPRCDQCQRGYCNRYPVCV-ACHPC 584
Score = 237 (88.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 57/156 (36%), Positives = 78/156 (50%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C+ N GP+CD C P ++ LA +G CEPC C +L +P C+Q TGQC C+
Sbjct: 453 CLPNVVGPKCDQCAPYHW--KLASGQG-CEPCACDPHNSL-----SPQCNQFTGQCPCRE 504
Query: 97 HVVGTNCD-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
G C QC Y ++ GC++CDCD G+ CD +G+CLCRPG+TG R
Sbjct: 505 GFGGLMCSAAAIRQCPDRTYGDVA-TGCRACDCDFRGTEGPGCDKASGRCLCRPGLTGPR 563
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQ 187
C+ CQ + C P+ + C P Q
Sbjct: 564 CDQCQRGY----------CNRYPV---CVACHPCFQ 586
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 341 (125.1 bits), Expect = 7.7e-29, P = 7.7e-29
Identities = 76/196 (38%), Positives = 101/196 (51%)
Query: 7 HVSVMDILLCVGPPSDILKSVAGT-----TGDCLKCIYNTGGPQCDTCLPGYFGDALALP 61
H +D C D+ S GT TG C+ C N GG +C C+ GYF P
Sbjct: 783 HFYGLDATGCKACDCDVAGSRPGTVCDAWTGQCV-CKPNVGGRRCSECVEGYFYQ----P 837
Query: 62 KGD---CEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG-- 116
+ C PC C GT+ +CD+ TGQC CK V G +C+QCE Y++ G
Sbjct: 838 QNRSFLCLPCNCDRTGTVNGSL---LCDKSTGQCPCKLGVTGLHCNQCESHRYHLTVGSF 894
Query: 117 EGCKSCDCDPVGSLNRT-CDPITGQCLCRPGVTGTRCELCQPNHY--GFSLDGCKPCMCD 173
+GC+ C+CDP+G+L T CDP++GQC C P G RC CQP Y + GC PC C
Sbjct: 895 QGCQMCECDPLGTLPGTICDPLSGQCPCLPNRQGRRCNQCQPGFYISPGNATGCLPCSCH 954
Query: 174 PIGSNSLQCDP-SGQC 188
G+ + C+ +GQC
Sbjct: 955 TTGAVNHICNSLTGQC 970
Score = 331 (121.6 bits), Expect = 8.8e-28, P = 8.8e-28
Identities = 69/170 (40%), Positives = 93/170 (54%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-D-CEPCQCYIPGTLETETFTPVCD 86
G G C C +NT G C+ C +F A P D C PC C GT +F +CD
Sbjct: 600 GGGGVCDDCEHNTAGKNCELCKDYFFRQVGADPSAIDVCRPCDCDKVGT-RNSSF--LCD 656
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNR--TCDPITGQCL 142
Q+ GQC+CK HV G C+QC+ G YN+ + GC C+C+ G+++ TC P +GQC
Sbjct: 657 QIGGQCNCKRHVSGRQCNQCQNGFYNLQEWDPDGCSPCNCNTSGTVDGDITCHPNSGQCK 716
Query: 143 CRPGVTGTRCELCQPNH---YGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ V G RC+ C F+ DGC+PC C+ GS + C+P SGQC
Sbjct: 717 CKANVIGLRCDHCNFGFKFLQSFNDDGCEPCQCNLHGSVNRLCNPLSGQC 766
Score = 321 (118.1 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 61/161 (37%), Positives = 85/161 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C + G QC+ C G++ P G C PC C GT++ + C +GQ
Sbjct: 660 GQC-NCKRHVSGRQCNQCQNGFYNLQEWDPDG-CSPCNCNTSGTVDGDI---TCHPNSGQ 714
Query: 92 CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK +V+G CD C G + S +GC+ C C+ GS+NR C+P++GQC C+ G
Sbjct: 715 CKCKANVIGLRCDHCNFGFKFLQSFNDDGCEPCQCNLHGSVNRLCNPLSGQCECKKEAKG 774
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSN-SLQCDP-SGQC 188
+C+ C+ + YG GCK C CD GS CD +GQC
Sbjct: 775 LQCDTCREHFYGLDATGCKACDCDVAGSRPGTVCDAWTGQC 815
Score = 270 (100.1 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 60/165 (36%), Positives = 82/165 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C G QCDTC ++G L C+ C C + G+ T VCD TG
Sbjct: 763 SGQC-ECKKEAKGLQCDTCREHFYG----LDATGCKACDCDVAGS-RPGT---VCDAWTG 813
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKP+V G C +C G++ C C+CD G++N + CD TGQC C+ G
Sbjct: 814 QCVCKPNVGGRRCSECVEGYFYQPQNRSFLCLPCNCDRTGTVNGSLLCDKSTGQCPCKLG 873
Query: 147 VTGTRCELCQPNHYGFSLDGCKPC-MCDPIGSNSLQCDPSGQCPG 190
VTG C C+ + Y ++ + C MC+ CDP G PG
Sbjct: 874 VTGLHCNQCESHRYHLTVGSFQGCQMCE--------CDPLGTLPG 910
Score = 266 (98.7 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 65/192 (33%), Positives = 95/192 (49%)
Query: 6 HHVSVMDILLCVGPPSDILKSVAGT-----TGDCLKCIYNTGGPQCDTCLPGYF---GDA 57
+H++V C D L ++ GT +G C C+ N G +C+ C PG++ G+A
Sbjct: 887 YHLTVGSFQGCQMCECDPLGTLPGTICDPLSGQC-PCLPNRQGRRCNQCQPGFYISPGNA 945
Query: 58 LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP-HVVGTNCDQCEVGHYNIISG 116
C PC C+ G + +C+ LTGQC C+ + G +CD C+ ++ S
Sbjct: 946 TG-----CLPCSCHTTGAVNH-----ICNSLTGQCVCQDASIAGQSCDYCKDLYFGFDSL 995
Query: 117 EG-CKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
G C+ C+C G+LN TC +TGQC C+ VTG++C+ C PN LD P C
Sbjct: 996 TGRCQPCNCHLSGALNETCHLVTGQCFCKRFVTGSKCDTCVPN--ASHLDISNPLGCSKT 1053
Query: 176 GSNSLQCDPSGQ 187
S Q P GQ
Sbjct: 1054 PSQ--QPPPRGQ 1063
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 339 (124.4 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 67/167 (40%), Positives = 96/167 (57%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C G +CD+C ++G LP CE C C G+ + T VCD TG
Sbjct: 760 SGQCA-CKKEAKGLKCDSCRENFYG----LPWSACEVCDCSKAGS-QPGT---VCDTETG 810
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKP+V G C QC+ G++N+ + C +C+C+ +G++N + CD TGQC C+ G
Sbjct: 811 QCVCKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGTVNGSLRCDKSTGQCPCKLG 870
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGS-NSLQCDP-SGQC 188
VTG RC C+P+ + ++D GC+ C CD +G+ CDP SGQC
Sbjct: 871 VTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQC 917
Score = 334 (122.6 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 71/167 (42%), Positives = 90/167 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCYIPGTLETETFTPVCDQ 87
TG C+ C N GG QC C GYF L + D C C C GT+ CD+
Sbjct: 809 TGQCV-CKPNVGGRQCSQCKAGYFN----LYQNDSHLCLTCNCEKMGTVNGSLR---CDK 860
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL-NRTCDPITGQCLCR 144
TGQC CK V G C QC+ +N+ + +GC++CDCD +G+L CDPI+GQCLC
Sbjct: 861 STGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLPGSMCDPISGQCLCL 920
Query: 145 PGVTGTRCELCQPNHYGF--SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
P G RCE CQP Y + GC PC+C G+ S C+ +GQC
Sbjct: 921 PHRQGRRCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHICNSVTGQC 967
Score = 327 (120.2 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 62/161 (38%), Positives = 86/161 (53%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C G QC C G++ D AL C PC C GT++ + C Q +GQ
Sbjct: 657 GQC-DCKRRVSGRQCLQCQDGFY-DLQALDPDGCRPCNCNPSGTVDGDI---TCHQNSGQ 711
Query: 92 CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
CSCK +V+G C++C G + S G+GC+ C C+ GS+N+ CDP++GQC C+ G
Sbjct: 712 CSCKANVIGLRCNRCNFGFKFLQSFNGDGCEPCQCNLHGSVNQLCDPLSGQCACKKEAKG 771
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSN-SLQCDP-SGQC 188
+C+ C+ N YG C+ C C GS CD +GQC
Sbjct: 772 LKCDSCRENFYGLPWSACEVCDCSKAGSQPGTVCDTETGQC 812
Score = 305 (112.4 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 62/164 (37%), Positives = 86/164 (52%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+TG C C G +C C P F + P+G C+ C C GTL +CD ++
Sbjct: 861 STGQC-PCKLGVTGLRCHQCKPHRFNLTMDNPQG-CQACDCDSLGTLPGS----MCDPIS 914
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCR-PGV 147
GQC C PH G C+QC+ G Y+ S GC C C G+++ C+ +TGQC C P
Sbjct: 915 GQCLCLPHRQGRRCEQCQPGFYSSPSNATGCLPCLCHTAGAVSHICNSVTGQCSCHDPST 974
Query: 148 TGTRCELCQPNHYGFS-LDG-CKPCMCDPIGSNSLQCDP-SGQC 188
TG C CQ +++ F L G C+PC C G+++ CD +GQC
Sbjct: 975 TGRSCHQCQESYFRFDPLTGRCRPCHCHVAGASNGTCDAVTGQC 1018
Score = 292 (107.8 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 62/170 (36%), Positives = 87/170 (51%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCD 86
G G C C ++T G C++C ++ A P C+ C C GT CD
Sbjct: 597 GGGGVCDDCQHHTTGRHCESCQDYFYRPVGADPAAPDACKLCDCNRAGTRNGSLH---CD 653
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNR--TCDPITGQCL 142
+ GQC CK V G C QC+ G Y++ + +GC+ C+C+P G+++ TC +GQC
Sbjct: 654 PIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRPCNCNPSGTVDGDITCHQNSGQCS 713
Query: 143 CRPGVTGTRCELCQPNH---YGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ V G RC C F+ DGC+PC C+ GS + CDP SGQC
Sbjct: 714 CKANVIGLRCNRCNFGFKFLQSFNGDGCEPCQCNLHGSVNQLCDPLSGQC 763
Score = 260 (96.6 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 51/143 (35%), Positives = 80/143 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C+ + G +C+ C PG++ + G C PC C+ G + + +C+ +TG
Sbjct: 914 SGQCL-CLPHRQGRRCEQCQPGFYSSP-SNATG-CLPCLCHTAGAV-----SHICNSVTG 965
Query: 91 QCSCK-PHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
QCSC P G +C QC+ ++ ++G C+ C C G+ N TCD +TGQC C+ V
Sbjct: 966 QCSCHDPSTTGRSCHQCQESYFRFDPLTGR-CRPCHCHVAGASNGTCDAVTGQCFCKEFV 1024
Query: 148 TGTRCELCQP--NHYGFS-LDGC 167
TG++C+ C P +H + L GC
Sbjct: 1025 TGSKCDTCVPGASHLDVNNLLGC 1047
Score = 138 (53.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 48/173 (27%), Positives = 67/173 (38%)
Query: 41 TGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT------- 89
T GPQCD C P Y F + +C+PCQC+ G + + D
Sbjct: 541 TEGPQCDRCSPLYNDKPFRSGDNVNAFNCKPCQCH--GHASSCHYDASVDPFPLEHNRGG 598
Query: 90 -GQCS-CKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDCDPVGSLNRTCDPITGQCL 142
G C C+ H G +C+ C+ Y + + CK CDC+ G+ N G
Sbjct: 599 GGVCDDCQHHTTGRHCESCQDYFYRPVGADPAAPDACKLCDCNRAGTRN-------GSLH 651
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCM-----CDPIGSNSLQCDPSGQCPG 190
C P G +C+ C+ G C+ DP G C+PSG G
Sbjct: 652 CDP--IGGQCD-CKRRVSGRQCLQCQDGFYDLQALDPDGCRPCNCNPSGTVDG 701
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 339 (124.4 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 76/189 (40%), Positives = 98/189 (51%)
Query: 11 MDILLCVGPPSDILKSVAGT-----TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDC 65
+D+ C +I S AGT TG C C N GG QC+ CL GY + C
Sbjct: 786 LDVTGCKACECNIAGSFAGTVCDARTGQCA-CKPNIGGRQCNECLDGYHRIQVN-HSFVC 843
Query: 66 EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCD 123
PC C GT+ +CD+ TGQC CK V+G C+QC + YN+ GC+ CD
Sbjct: 844 LPCDCDKAGTVNGSL---LCDKSTGQCPCKAGVIGLQCNQCMLHTYNLSMRNLLGCQRCD 900
Query: 124 CDPVGSLNRT-CDPITGQCLCRPGVTGTRCELCQPNHY--GFSLDGCKPCMCDPIGSNSL 180
CD G+L T CD ++GQC+C P G RC C+P Y S+ GC PC+C GS +
Sbjct: 901 CDAKGTLAGTVCDHVSGQCVCLPHRQGRRCNECKPGFYFSPSSVTGCLPCLCHTAGSVNQ 960
Query: 181 QCDP-SGQC 188
CD +GQC
Sbjct: 961 VCDKLTGQC 969
Score = 329 (120.9 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 68/173 (39%), Positives = 95/173 (54%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGD-CEPCQCYIPGTLETETFTPVCD 86
G+ G C C +NT G C+ C ++ A A L D C+PC CY GT +CD
Sbjct: 599 GSGGVCDNCQHNTTGRNCELCKDFHYRQAGADLSAIDVCKPCDCYATGTKNKSL---LCD 655
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNR--TCDPITGQCL 142
+ GQC+CK HV G C+QC+ G YN+ +GC C+C+ G++N TC +GQC
Sbjct: 656 NIGGQCNCKRHVSGRQCNQCQEGFYNLQQSNPDGCSPCNCNTSGTVNGDITCHQNSGQCK 715
Query: 143 CRPGVTGTRCELCQPNHYGFSL------DGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ V G RC+ C ++GF DGC+PC C+ GS + C+P +GQC
Sbjct: 716 CKANVIGPRCDSC---NFGFKALRYSNEDGCEPCWCNSHGSVNQFCNPLTGQC 765
Score = 327 (120.2 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 64/161 (39%), Positives = 87/161 (54%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C + G QC+ C G++ + P G C PC C GT+ + C Q +GQ
Sbjct: 659 GQC-NCKRHVSGRQCNQCQEGFYNLQQSNPDG-CSPCNCNTSGTVNGDI---TCHQNSGQ 713
Query: 92 CSCKPHVVGTNCDQCEVGHYNI-ISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK +V+G CD C G + S E GC+ C C+ GS+N+ C+P+TGQC C+ V G
Sbjct: 714 CKCKANVIGPRCDSCNFGFKALRYSNEDGCEPCWCNSHGSVNQFCNPLTGQCNCKEQVKG 773
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNS-LQCDP-SGQC 188
C+ C N YG + GCK C C+ GS + CD +GQC
Sbjct: 774 LLCDTCVDNFYGLDVTGCKACECNIAGSFAGTVCDARTGQC 814
Score = 311 (114.5 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 74/197 (37%), Positives = 102/197 (51%)
Query: 6 HHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTG---------GPQCDTCLPGYFGD 56
H + V +C+ P D K AGT L C +TG G QC+ C+ +
Sbjct: 833 HRIQVNHSFVCL--PCDCDK--AGTVNGSLLCDKSTGQCPCKAGVIGLQCNQCMLHTYNL 888
Query: 57 ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIIS 115
++ G C+ C C GTL VCD ++GQC C PH G C++C+ G Y + S
Sbjct: 889 SMRNLLG-CQRCDCDAKGTLAGT----VCDHVSGQCVCLPHRQGRRCNECKPGFYFSPSS 943
Query: 116 GEGCKSCDCDPVGSLNRTCDPITGQCLCRP-GVTGTRCELCQPNHYGF-SLDG-CKPCMC 172
GC C C GS+N+ CD +TGQC+C+ VTG CE C+ +H+GF S+ G C+ C C
Sbjct: 944 VTGCLPCLCHTAGSVNQVCDKLTGQCICQDVSVTGRTCERCKEHHFGFDSVTGRCQHCNC 1003
Query: 173 DPIGSNSLQCD-PSGQC 188
P G+ S C +GQC
Sbjct: 1004 HPAGAISGTCHLVTGQC 1020
Score = 309 (113.8 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 69/167 (41%), Positives = 89/167 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVCDQLT 89
+G C KC N GP+CD+C G+ AL D CEPC C G++ F C+ LT
Sbjct: 711 SGQC-KCKANVIGPRCDSCNFGF--KALRYSNEDGCEPCWCNSHGSVNQ--F---CNPLT 762
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT-CDPITGQCLCRPGVT 148
GQC+CK V G CD C Y + GCK+C+C+ GS T CD TGQC C+P +
Sbjct: 763 GQCNCKEQVKGLLCDTCVDNFYGL-DVTGCKACECNIAGSFAGTVCDARTGQCACKPNIG 821
Query: 149 GTRCELCQPNHYGFSLDG---CKPCMCDPIGS--NSLQCDPS-GQCP 189
G +C C ++ ++ C PC CD G+ SL CD S GQCP
Sbjct: 822 GRQCNECLDGYHRIQVNHSFVCLPCDCDKAGTVNGSLLCDKSTGQCP 868
Score = 296 (109.3 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 64/167 (38%), Positives = 87/167 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C G CDTC+ ++G L C+ C+C I G+ VCD TG
Sbjct: 762 TGQC-NCKEQVKGLLCDTCVDNFYG----LDVTGCKACECNIAGSFAGT----VCDARTG 812
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC+CKP++ G C++C G++ I C CDCD G++N + CD TGQC C+ G
Sbjct: 813 QCACKPNIGGRQCNECLDGYHRIQVNHSFVCLPCDCDKAGTVNGSLLCDKSTGQCPCKAG 872
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNS-LQCDP-SGQC 188
V G +C C + Y S+ GC+ C CD G+ + CD SGQC
Sbjct: 873 VIGLQCNQCMLHTYNLSMRNLLGCQRCDCDAKGTLAGTVCDHVSGQC 919
Score = 282 (104.3 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 58/179 (32%), Positives = 96/179 (53%)
Query: 3 LDVHHVSVMDILLCVGPPSDILKSVAGT-----TGDCLKCIYNTGGPQCDTCLPGYFGDA 57
L +++S+ ++L C D ++AGT +G C+ C+ + G +C+ C PG++
Sbjct: 883 LHTYNLSMRNLLGCQRCDCDAKGTLAGTVCDHVSGQCV-CLPHRQGRRCNECKPGFYFSP 941
Query: 58 LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP-HVVGTNCDQCEVGHYNIISG 116
++ C PC C+ G++ VCD+LTGQC C+ V G C++C+ H+ S
Sbjct: 942 SSVT--GCLPCLCHTAGSVNQ-----VCDKLTGQCICQDVSVTGRTCERCKEHHFGFDSV 994
Query: 117 EG-CKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDP 174
G C+ C+C P G+++ TC +TGQC+C+ VTG +C+ C PN + C P
Sbjct: 995 TGRCQHCNCHPAGAISGTCHLVTGQCVCKQFVTGLKCDNCVPNASNLDVHNLFGCSKTP 1053
Score = 215 (80.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 59/166 (35%), Positives = 81/166 (48%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGD------CEPCQCYIPGT-----LETETFT 82
C+K Y T G QCD CLP Y D P GD C+PCQCY LE + F
Sbjct: 537 CIKESY-TEGIQCDRCLPLY-NDKPFRP-GDQVHAYNCKPCQCYSHAVSCHYDLEMDPFP 593
Query: 83 PVCDQLTGQ-C-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRT-- 133
+ +G C +C+ + G NC+ C+ HY ++ + + CK CDC G+ N++
Sbjct: 594 QEYYRGSGGVCDNCQHNTTGRNCELCKDFHYRQAGADLSAIDVCKPCDCYATGTKNKSLL 653
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS 179
CD I GQC C+ V+G +C CQ Y +L P C P N+
Sbjct: 654 CDNIGGQCNCKRHVSGRQCNQCQEGFY--NLQQSNPDGCSPCNCNT 697
Score = 50 (22.7 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 156 QP-NHYGFSLDGCKPCMC---DPIGSNSLQCDPSGQCP 189
QP +Y F L C C P+ +LQ P G P
Sbjct: 3657 QPYTNYSFLLTACTSAGCASSQPLSGQTLQAAPHGVWP 3694
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 332 (121.9 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 67/167 (40%), Positives = 93/167 (55%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C G +CD C ++G LP CE C C GT + T VCD TG
Sbjct: 759 SGQCV-CKKEAKGLRCDVCRENFYG----LPWSACEVCDCNRAGT-QAGT---VCDAETG 809
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKP V G C +C+ G++N+ + C C+C+ G++N + CD TGQC C+ G
Sbjct: 810 QCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLG 869
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSN-SLQCDP-SGQC 188
VTG RC C+P+ + ++D GC+ C CD +G+ CDP SGQC
Sbjct: 870 VTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQC 916
Score = 322 (118.4 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 59/161 (36%), Positives = 89/161 (55%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
GD C G +C C G++G AL C PC C GT++ + C +GQ
Sbjct: 655 GDQCDCKRRVSGRRCFRCHIGFYG-LQALDPDCCRPCDCNPSGTVDGDI---TCHHNSGQ 710
Query: 92 CSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
CSCK +V+G CD+C G + ++ +GC+ C C+ GS+N+ CDP++GQC+C+ G
Sbjct: 711 CSCKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKG 770
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNS-LQCDP-SGQC 188
RC++C+ N YG C+ C C+ G+ + CD +GQC
Sbjct: 771 LRCDVCRENFYGLPWSACEVCDCNRAGTQAGTVCDAETGQC 811
Score = 316 (116.3 bits), Expect = 7.8e-27, P = 7.8e-27
Identities = 64/167 (38%), Positives = 89/167 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCYIPGTLETETFTPVCDQ 87
TG C+ C + GG +C C GYF L + D C PC C GT+ +CD+
Sbjct: 808 TGQCV-CKPSVGGRRCSECKEGYFN----LRQNDSHLCLPCNCEKTGTVNGSL---LCDK 859
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSL-NRTCDPITGQCLCR 144
TGQC CK V G C QC+ +N+ + +GC++CDCD +G+L CDP++GQCLC
Sbjct: 860 STGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGCQACDCDSLGTLLGSMCDPVSGQCLCL 919
Query: 145 PGVTGTRCELCQPNHYGF--SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
P RC CQP Y + GC PC+C + + + C+ +G C
Sbjct: 920 PHRQERRCVQCQPGCYSSPSNATGCLPCLCHTVATKNCICNSVTGHC 966
Score = 293 (108.2 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 63/166 (37%), Positives = 83/166 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C C N G +CD C G F +L CEPC C + G++ +CD L+G
Sbjct: 708 SGQC-SCKANVIGLRCDRCSFG-FKFLRSLNADGCEPCHCNLHGSVNQ-----LCDPLSG 760
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT-CDPITGQCLCRPGVTG 149
QC CK G CD C Y + C+ CDC+ G+ T CD TGQC+C+P V G
Sbjct: 761 QCVCKKEAKGLRCDVCRENFYGL-PWSACEVCDCNRAGTQAGTVCDAETGQCVCKPSVGG 819
Query: 150 TRCELCQPNHYGFSLDG---CKPCMCDPIGS--NSLQCDPS-GQCP 189
RC C+ ++ + C PC C+ G+ SL CD S GQCP
Sbjct: 820 RRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCP 865
Score = 282 (104.3 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 64/174 (36%), Positives = 89/174 (51%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD---CEPCQCYIPGTLETETFTPVC 85
G G C C ++T G C++C YF + D C+ C C GT +C
Sbjct: 596 GGGGVCDDCQHHTTGRNCESC-QDYFYRPIGADPADPEVCKHCDCNRDGTRNGSL---LC 651
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNR--TCDPITGQC 141
D + QC CK V G C +C +G Y + + + C+ CDC+P G+++ TC +GQC
Sbjct: 652 DLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSGTVDGDITCHHNSGQC 711
Query: 142 LCRPGVTGTRCELCQPNHYGF----SL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ V G RC+ C +GF SL DGC+PC C+ GS + CDP SGQC
Sbjct: 712 SCKANVIGLRCDRCS---FGFKFLRSLNADGCEPCHCNLHGSVNQLCDPLSGQC 762
Score = 217 (81.4 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C+ + +C C PG + + G C PC C+ T+ T+ +C+ +TG
Sbjct: 913 SGQCL-CLPHRQERRCVQCQPGCYSSP-SNATG-CLPCLCH---TVATKNC--ICNSVTG 964
Query: 91 QCSCK-PHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C C P G + QC+ ++ ++G C+ C C G+ N TCD +TGQC C+ V
Sbjct: 965 HCYCPDPSTTGLSWHQCQDRYFRFDPLTGR-CRPCHCHVAGASNGTCDAVTGQCFCKEFV 1023
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQ 187
TG++C+ C P ++ C P S Q P G+
Sbjct: 1024 TGSKCDTCVPGASHLDVNNLLACSKTP----SQQPPPRGR 1059
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/177 (29%), Positives = 67/177 (37%)
Query: 41 TGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT------- 89
T GPQC C P Y F + +C+PCQC+ G + + D
Sbjct: 540 TEGPQCGRCSPLYNDKPFRSGNKVHAFNCKPCQCH--GHASSCHYDASMDPFPLEYNRGG 597
Query: 90 -GQCS-CKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRTCDPITGQCL 142
G C C+ H G NC+ C+ Y I E CK CDC+ G+ N G L
Sbjct: 598 GGVCDDCQHHTTGRNCESCQDYFYRPIGADPADPEVCKHCDCNRDGTRN-------GSLL 650
Query: 143 CRPGVTGTRCEL--------CQPNHYGF-SLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
C + G +C+ C H GF L P C P C+PSG G
Sbjct: 651 C--DLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRPC-----DCNPSGTVDG 700
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 333 (122.3 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 67/162 (41%), Positives = 88/162 (54%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C KC + G QC+ C G++ AL G C C C GT++ + C Q +GQ
Sbjct: 672 GQC-KCKRHVSGRQCNQCQHGFYKLQSALADG-CRACNCNTAGTVQPDI---TCHQDSGQ 726
Query: 92 CSCKPHVVGTNCDQCEVGH--YNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK +V+G CD+C G N + +GC SC CDP GSL++ C+P TGQC C+ GV G
Sbjct: 727 CQCKANVIGLTCDRCNYGFKFLNHTNPDGCISCGCDPWGSLHQFCNPFTGQCECKAGVRG 786
Query: 150 TRCELCQPNHYGFSLDG-CKPCMCDPIGS-NSLQCDP-SGQC 188
C+ C P+ Y + G C PC C GS CD +GQC
Sbjct: 787 LLCDTCIPHFYSQNSSGVCLPCNCSLNGSVPGTSCDAVTGQC 828
Score = 329 (120.9 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 67/168 (39%), Positives = 89/168 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C G CDTC+P ++ + G C PC C + G++ + CD +TG
Sbjct: 775 TGQC-ECKAGVRGLLCDTCIPHFYSQNSS---GVCLPCNCSLNGSVPGTS----CDAVTG 826
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKPH G CD C G++++ GC C CD G++N + CD TGQCLC+
Sbjct: 827 QCKCKPHTEGRRCDVCRDGYHSLDRSNSLGCLPCQCDLRGTVNGSGVCDKTTGQCLCKNN 886
Query: 147 VTGTRCELCQPNHYGFS----LDGCKPCMCDPIGS-NSLQCDP-SGQC 188
V RC C + Y S GC+PC CD IG+ + CDP SGQC
Sbjct: 887 VESLRCNRCSAHTYNLSSANATHGCQPCYCDHIGTVPATVCDPVSGQC 934
Score = 307 (113.1 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 68/187 (36%), Positives = 94/187 (50%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
S TG C KC +T G +CD C GY + G C PCQC + GT+ + VC
Sbjct: 820 SCDAVTGQC-KCKPHTEGRRCDVCRDGYHSLDRSNSLG-CLPCQCDLRGTVNG---SGVC 874
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE---GCKSCDCDPVGSLNRT-CDPITGQC 141
D+ TGQC CK +V C++C YN+ S GC+ C CD +G++ T CDP++GQC
Sbjct: 875 DKTTGQCLCKNNVESLRCNRCSAHTYNLSSANATHGCQPCYCDHIGTVPATVCDPVSGQC 934
Query: 142 LCRPGVTGTRCELCQPNHY--GFSLDGCKPCMCDPIGSNSLQCDP-SGQC----PGVFMN 194
+C P G C C+P + L C+ C C +G+ C SGQC P + +
Sbjct: 935 ICLPTRYGRDCGTCKPGFFLSEAGLSECEVCECHSVGAMGQVCAAHSGQCVCAHPSLTGH 994
Query: 195 RAEMSSD 201
R + D
Sbjct: 995 RCDQCQD 1001
Score = 305 (112.4 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 63/173 (36%), Positives = 90/173 (52%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGD--ALALPKGDCEPCQCYIPGTLETETFTPVCD 86
G G C C +NT G C+ C ++ + AL C+ C+C+ GT+ C+
Sbjct: 612 GGGGVCDDCTHNTTGRNCERCRSLFYREVGALLWATDVCKACECHSAGTINASLH---CE 668
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNR--TCDPITGQCL 142
+ GQC CK HV G C+QC+ G Y + S +GC++C+C+ G++ TC +GQC
Sbjct: 669 PIGGQCKCKRHVSGRQCNQCQHGFYKLQSALADGCRACNCNTAGTVQPDITCHQDSGQCQ 728
Query: 143 CRPGVTGTRCELCQPNHYGFSL------DGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ V G C+ C +YGF DGC C CDP GS C+P +GQC
Sbjct: 729 CKANVIGLTCDRC---NYGFKFLNHTNPDGCISCGCDPWGSLHQFCNPFTGQC 778
Score = 300 (110.7 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 61/164 (37%), Positives = 88/164 (53%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG CL C N +C+ C + + A C+PC C GT+ VCD ++
Sbjct: 877 TTGQCL-CKNNVESLRCNRCSAHTYNLSSANATHGCQPCYCDHIGTVPAT----VCDPVS 931
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLC-RPGV 147
GQC C P G +C C+ G + +G C+ C+C VG++ + C +GQC+C P +
Sbjct: 932 GQCICLPTRYGRDCGTCKPGFFLSEAGLSECEVCECHSVGAMGQVCAAHSGQCVCAHPSL 991
Query: 148 TGTRCELCQPNHYGF--SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
TG RC+ CQ +GF S+ C+PC CDP+G + C P +GQC
Sbjct: 992 TGHRCDQCQDLFFGFNPSVGRCEPCGCDPVGGFNGTCHPQTGQC 1035
Score = 271 (100.5 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 58/145 (40%), Positives = 75/145 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C+ G C TC PG+F L +CE C+C+ G + VC +G
Sbjct: 931 SGQCI-CLPTRYGRDCGTCKPGFFLSEAGL--SECEVCECHSVGAMGQ-----VCAAHSG 982
Query: 91 QCSCK-PHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
QC C P + G CDQC+ + G C+ C CDPVG N TC P TGQCLC+P VT
Sbjct: 983 QCVCAHPSLTGHRCDQCQDLFFGFNPSVGRCEPCGCDPVGGFNGTCHPQTGQCLCKPFVT 1042
Query: 149 GTRCELC-------QPNHY-GFSLD 165
G +C+ C PN+Y G S D
Sbjct: 1043 GDKCDACVEGASFMDPNNYLGCSKD 1067
Score = 251 (93.4 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 65/168 (38%), Positives = 84/168 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C N G CD C G+ P G C C C G+L F C+ TG
Sbjct: 724 SGQC-QCKANVIGLTCDRCNYGFKFLNHTNPDG-CISCGCDPWGSLHQ--F---CNPFTG 776
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRT-CDPITGQCLCRPGVT 148
QC CK V G CD C + H+ + G C C+C GS+ T CD +TGQC C+P
Sbjct: 777 QCECKAGVRGLLCDTC-IPHFYSQNSSGVCLPCNCSLNGSVPGTSCDAVTGQCKCKPHTE 835
Query: 149 GTRCELCQPNHYGFSLD-----GCKPCMCDPIGS--NSLQCDPS-GQC 188
G RC++C+ ++ SLD GC PC CD G+ S CD + GQC
Sbjct: 836 GRRCDVCRDGYH--SLDRSNSLGCLPCQCDLRGTVNGSGVCDKTTGQC 881
Score = 180 (68.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 52/178 (29%), Positives = 76/178 (42%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD 64
V +++ C G SV+ CL + T G C+ C+P F D P GD
Sbjct: 521 VDEITISGRCECHGHADSCDTSVSPYRCACLPESH-THGANCERCIP-LFNDKPFRP-GD 577
Query: 65 ------CEPCQCYIPGTLETETFTPVCDQLTGQ--------CS-CKPHVVGTNCDQCEVG 109
C PCQCY G + + D G+ C C + G NC++C
Sbjct: 578 QIQAFNCRPCQCY--GHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGRNCERCRSL 635
Query: 110 HYNIISG-----EGCKSCDCDPVGSLNRT--CDPITGQCLCRPGVTGTRCELCQPNHY 160
Y + + CK+C+C G++N + C+PI GQC C+ V+G +C CQ Y
Sbjct: 636 FYREVGALLWATDVCKACECHSAGTINASLHCEPIGGQCKCKRHVSGRQCNQCQHGFY 693
Score = 138 (53.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 35/100 (35%), Positives = 45/100 (45%)
Query: 28 AGTTGDCLKCIY-NTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCD 86
A +G C+ C + + G +CD C +FG ++ G CEPC C G F C
Sbjct: 978 AAHSGQCV-CAHPSLTGHRCDQCQDLFFGFNPSV--GRCEPCGCDPVGG-----FNGTCH 1029
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
TGQC CKP V G CD C G + + C DP
Sbjct: 1030 PQTGQCLCKPFVTGDKCDACVEGA-SFMDPNNYLGCSKDP 1068
Score = 35 (17.4 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 147 VTGTRCELCQPNHYGFSLDGCKPCMC 172
+TGT L + Y +L C C
Sbjct: 2035 LTGTLSGLAPFSSYSITLTACTQAGC 2060
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 330 (121.2 bits), Expect = 7.7e-28, P = 7.7e-28
Identities = 73/180 (40%), Positives = 91/180 (50%)
Query: 26 SVAGTTGD-CLK------CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET 78
+V GT GD CL C GG C+TC GY + G C C C G+
Sbjct: 475 NVNGTIGDVCLPEDGQCPCKAGFGGTFCETCADGYTN----VTAG-CVECVCDATGSEHG 529
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
C TGQC CKP G +CD+C+VG++ G+ CK C+CDP+G+ CD T
Sbjct: 530 N-----CSASTGQCECKPAYAGLSCDKCQVGYF----GDDCKFCNCDPMGTEGGVCDQTT 580
Query: 139 GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQCP--GVFMNR 195
GQCLC+ G G +C+ C YG+ CK C CD G S +CD SGQCP G F R
Sbjct: 581 GQCLCKEGFAGDKCDRCDIAFYGYP--NCKACACDGAGITSPECDATSGQCPCNGNFTGR 638
Score = 312 (114.9 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 57/165 (34%), Positives = 85/165 (51%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV 84
+S +GDC C NT G C++C ++GDA+ +C C+C ++ +
Sbjct: 1949 RSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAK--NCSSCEC-------SQCGSQY 1999
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD +G C CK +V G +CD+C+ H+ +GC+ C C + N C+ GQC CR
Sbjct: 2000 CDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQGCQGCHCG-TAAFNTQCNVENGQCTCR 2058
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
PG TG RCE C+ ++ + GC C C+ S CD +GQC
Sbjct: 2059 PGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVRTGQC 2103
Score = 286 (105.7 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 62/161 (38%), Positives = 77/161 (47%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
+ +TG C +C G CD C GYFGD DC+ C C GT E VCDQ
Sbjct: 532 SASTGQC-ECKPAYAGLSCDKCQVGYFGD-------DCKFCNCDPMGT-EGG----VCDQ 578
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TGQC CK G CD+C++ Y CK+C CD G + CD +GQC C
Sbjct: 579 TTGQCLCKEGFAGDKCDRCDIAFYGY---PNCKACACDGAGITSPECDATSGQCPCNGNF 635
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TG C+ C Y + D C+ C C G+ CD +GQC
Sbjct: 636 TGRTCDKCAAGFYNYP-D-CRGCECLLSGAKGQTCDSNGQC 674
Score = 281 (104.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 60/161 (37%), Positives = 78/161 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C C NT G C+ C GYF G P+ C+ C C + + T C +
Sbjct: 389 GVCKNCRENTEGVNCNKCSFGYFRPEGVTWNEPQ-PCKVCDC------DPDKHTGACAEE 441
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TG+C C P VG +CDQC G+Y+ CK C+C+ G++ C P GQC C+ G
Sbjct: 442 TGKCECLPRFVGEDCDQCASGYYD---APKCKPCECNVNGTIGDVCLPEDGQCPCKAGFG 498
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
GT CE C + + GC C+CD GS C S GQC
Sbjct: 499 GTFCETCADGYTNVTA-GCVECVCDATGSEHGNCSASTGQC 538
Score = 279 (103.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 61/169 (36%), Positives = 89/169 (52%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+ G C C N G +CD C P ++ + CE C C G T F CD+++
Sbjct: 670 SNGQCY-CKGNFEGERCDRCKPNFYNFPI------CEECNCNPSGV--TRDFQG-CDKVS 719
Query: 90 -GQ-CSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLN--RTCDPITGQCLC 143
G+ CSC+ HV G CDQC+ +++ +GC+SCDC+ G+++ TCD TGQC+C
Sbjct: 720 PGELCSCRKHVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMC 779
Query: 144 RPGVTGTRCELCQPNHY---GFSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
+ G RC+ C Y ++ GC+ C CD G+ +CD SGQC
Sbjct: 780 KKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGALRAECDITSGQC 828
Score = 272 (100.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 54/141 (38%), Positives = 75/141 (53%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C N G CD C P ++G + +G C+ C C GT F C+ G
Sbjct: 2004 SGGC-ECKINVEGDSCDRCKPDHWGFSKC--QG-CQGCHC---GTA---AFNTQCNVENG 2053
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
QC+C+P G C+ CE G++N GE GC CDC+ S+ CD TGQC C+ G TG
Sbjct: 2054 QCTCRPGATGMRCEHCEHGYWNY--GEHGCDKCDCEADLSMGTVCDVRTGQCHCQEGATG 2111
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
+RC+ C P++ GC+ C
Sbjct: 2112 SRCDQCLPSYLRIPTYGCRRC 2132
Score = 272 (100.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 61/160 (38%), Positives = 76/160 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C KC G +C+ C PGY+ P +C CQC G CD+ TGQ
Sbjct: 1432 GQC-KCKPGVIGRRCERCAPGYYN----FP--ECIKCQCNA-GQQ--------CDERTGQ 1475
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSL--NRTCDPITGQCLCRPGVTG 149
C C PHV G CD+C + GC+ C C P GS N CDP +GQCLCR + G
Sbjct: 1476 CFCPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDPESGQCLCRESMGG 1535
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG-QC 188
+C+ C YGF C C C+ G+ CD + QC
Sbjct: 1536 RQCDRCLAGFYGFP--HCYGCSCNRAGTTEEICDATNAQC 1573
Score = 269 (99.8 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 64/172 (37%), Positives = 80/172 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCD--- 86
TG C C +NT G C+ C G++G+A DC C C + P T F CD
Sbjct: 1843 TGICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMACACPFAP----TNNFAKSCDVSE 1898
Query: 87 --QLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSL--NRTCDPITGQ 140
QL QC+CKP G CD+C G + ISGE C C C+ +L +R+C P +G
Sbjct: 1899 EGQLL-QCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGD 1957
Query: 141 C-LCRPGVTGTRCELCQPNHYGFSLDG--CKPCMCDPIGSNSLQCD-PSGQC 188
C LC G CE C YG ++ C C C GS CD SG C
Sbjct: 1958 CYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQ--YCDNKSGGC 2007
Score = 267 (99.0 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 57/156 (36%), Positives = 77/156 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG CL C G +CD C ++G P +C+ C C G +P CD +
Sbjct: 579 TTGQCL-CKEGFAGDKCDRCDIAFYG----YP--NCKACACDGAGIT-----SPECDATS 626
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C + G CD+C G YN C+ C+C G+ +TCD GQC C+ G
Sbjct: 627 GQCPCNGNFTGRTCDKCAAGFYNY---PDCRGCECLLSGAKGQTCDS-NGQCYCKGNFEG 682
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIG-SNSLQ-CD 183
RC+ C+PN Y F + C+ C C+P G + Q CD
Sbjct: 683 ERCDRCKPNFYNFPI--CEECNCNPSGVTRDFQGCD 716
Score = 264 (98.0 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 57/151 (37%), Positives = 73/151 (48%)
Query: 16 CVGPPSDILKSVAG----TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
C PS + + G + G+ C + G CD C P ++ D + C C C
Sbjct: 701 CNCNPSGVTRDFQGCDKVSPGELCSCRKHVTGRICDQCKPTFW-DLQYHHEDGCRSCDCN 759
Query: 72 IPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGS 129
+ GT+ CD TGQC CK + G CDQC G Y + S GC+SC CD G+
Sbjct: 760 VNGTISGLN---TCDLKTGQCMCKKNADGRRCDQCADGFYRLNSYNQMGCESCHCDIGGA 816
Query: 130 LNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
L CD +GQC CRP VTG RC+ NHY
Sbjct: 817 LRAECDITSGQCKCRPRVTGLRCDQPIENHY 847
Score = 255 (94.8 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 53/125 (42%), Positives = 67/125 (53%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPV 127
C C G+ E+F C+Q GQC CKP V+G C++C G+YN C C C+
Sbjct: 1415 CDCVAQGS---ESFQ--CEQYGGQCKCKPGVIGRRCERCAPGYYNFPE---CIKCQCNA- 1465
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSN--SLQCDP 184
+ CD TGQC C P V G C+ C N +G+ L GC+ C C P GS +L CDP
Sbjct: 1466 ---GQQCDERTGQCFCPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEGGNLVCDP 1522
Query: 185 -SGQC 188
SGQC
Sbjct: 1523 ESGQC 1527
Score = 238 (88.8 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 60/169 (35%), Positives = 84/169 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T+G C C N G CD C G++ P DC C+C + G + +T CD
Sbjct: 625 TSGQC-PCNGNFTGRTCDKCAAGFYN----YP--DCRGCECLLSGA-KGQT----CDS-N 671
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLN--RTCDPIT-GQ-CLCRP 145
GQC CK + G CD+C+ YN C+ C+C+P G + CD ++ G+ C CR
Sbjct: 672 GQCYCKGNFEGERCDRCKPNFYNFPI---CEECNCNPSGVTRDFQGCDKVSPGELCSCRK 728
Query: 146 GVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNS-LQ-CD-PSGQC 188
VTG C+ C+P + DGC+ C C+ G+ S L CD +GQC
Sbjct: 729 HVTGRICDQCKPTFWDLQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQC 777
Score = 230 (86.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 51/146 (34%), Positives = 66/146 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C C + G CD C+ FG D L G C+ C C+ G+ E VCD +
Sbjct: 1473 TGQCF-CPPHVEGQTCDRCVSNAFGYDPLI---G-CQKCGCHPQGS---EGGNLVCDPES 1524
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+ + G CD+C G Y C C C+ G+ CD QC C+ V G
Sbjct: 1525 GQCLCRESMGGRQCDRCLAGFYGF---PHCYGCSCNRAGTTEEICDATNAQCKCKENVYG 1581
Query: 150 TRCELCQPNHYGFSLD---GCKPCMC 172
RCE C+ + S + GC C C
Sbjct: 1582 GRCEACKAGTFDLSAENPLGCVNCFC 1607
Score = 227 (85.0 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 60/190 (31%), Positives = 86/190 (45%)
Query: 17 VGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL 76
+ P+ + + ++ + +C GP C C GY G C PC+C G
Sbjct: 1779 ISEPNGVDSVIKASSVEQCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECN--GHS 1836
Query: 77 ETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-NIISGE--GCKSCDCD--PVGSL 130
T CD TG C+ C+ + G +C+ C GHY N +G C +C C P +
Sbjct: 1837 AT------CDPDTGICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCMACACPFAPTNNF 1890
Query: 131 NRTCDPIT-GQ---CLCRPGVTGTRCELCQPNHYG---FSLDGCKPCMCDPIGSNSL--- 180
++CD GQ C C+PG TG RC+ C +G S + C PC C+ G+N+L
Sbjct: 1891 AKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCN--GNNNLTDS 1948
Query: 181 -QCDP-SGQC 188
C P SG C
Sbjct: 1949 RSCHPNSGDC 1958
Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/162 (29%), Positives = 64/162 (39%)
Query: 33 DCLKCIYNTGGPQCDT------CLPGYFG---DALALPKGDCEP---CQCYIPGTLETET 80
+C+KC N G QCD C P G D +P CQ +E
Sbjct: 1457 ECIKCQCNAG-QQCDERTGQCFCPPHVEGQTCDRCVSNAFGYDPLIGCQKCGCHPQGSEG 1515
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
VCD +GQC C+ + G CD+C G Y C C C+ G+ CD Q
Sbjct: 1516 GNLVCDPESGQCLCRESMGGRQCDRCLAGFYGF---PHCYGCSCNRAGTTEEICDATNAQ 1572
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQC 182
C C+ V G RCE C+ + S + +P+G C
Sbjct: 1573 CKCKENVYGGRCEACKAGTFDLSAE-------NPLG-----C 1602
Score = 154 (59.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 32/69 (46%), Positives = 38/69 (55%)
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
SCDC GS + C+ GQC C+PGV G RCE C P +Y F C C C+ G
Sbjct: 1414 SCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFP--ECIKCQCNA-GQ--- 1467
Query: 181 QCDP-SGQC 188
QCD +GQC
Sbjct: 1468 QCDERTGQC 1476
Score = 35 (17.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 96 PHVVGTNCDQCEVGHYNII 114
P VV D E G Y I+
Sbjct: 1077 PRVVEAKLDVPETGEYVIV 1095
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 324 (119.1 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 67/168 (39%), Positives = 88/168 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV---CDQ 87
+G CL+C+++T GP C C PG+ G A + C C C + GT + +P CDQ
Sbjct: 1005 SGQCLRCLHHTEGPHCAHCKPGFHGQAA---RQSCHRCNCNLLGTDPQQCPSPDRCNCDQ 1061
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+GQC C +CD+C +N+ SG GC+ C C P S TC+ TGQC CR G
Sbjct: 1062 SSGQCPCLSQR-DLSCDRCAPS-WNLTSGRGCQPCACHPSRSRGPTCNEFTGQCHCRTGF 1119
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGV 191
G C CQ H+G C+ C CDP G ++ QC S G C PGV
Sbjct: 1120 GGRTCSECQELHWGDPGLQCRACDCDPRGIDTPQCHRSTGHCSCRPGV 1167
Score = 303 (111.7 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 67/177 (37%), Positives = 92/177 (51%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFT 82
+V+G G C C +NT G C+ C P ++ D L P G C C C G+ +
Sbjct: 370 NVSG--GVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDP-GVCRSCDCDPMGSQDGGRCD 426
Query: 83 PVCDQ----LTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL--NRTC 134
P D ++GQC CK HVVG+ C QC G + + + + GC+ C CD G++ C
Sbjct: 427 PHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDALGCQRCQCDTRGTVPGGTPC 486
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLD--GCKPCMCDPIGSNSLQC-DPSGQC 188
D +G C C+ VTG C C P H+G S D GC+PC CD G+ QC + +GQC
Sbjct: 487 DRNSGACFCKRLVTGRGCNRCLPGHWGLSHDLLGCRPCDCDIGGALDPQCNEATGQC 543
Score = 271 (100.5 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 56/148 (37%), Positives = 78/148 (52%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC 103
P + C P + L G PCQC G+L +E C+ GQC CKP VVG C
Sbjct: 762 PPSEACDPLLISLSTLLYNGAL-PCQCDPQGSLSSE-----CNPHGGQCLCKPAVVGRRC 815
Query: 104 DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS 163
+ C G+Y GC++C C P G+L+ C+ +GQC CR G G RC+ CQ +GF
Sbjct: 816 NICAPGYYGF-GPTGCQACQCSPEGALSGLCEATSGQCPCRTGAFGLRCDRCQRGQWGFP 874
Query: 164 LDGCKPCMCDPIGSNSLQCDP-SGQCPG 190
C+PC+C+ ++ +CD +G C G
Sbjct: 875 --SCRPCVCN---GHADECDTHTGTCLG 897
Score = 256 (95.2 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 58/169 (34%), Positives = 80/169 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYI-PGTLETETFTPVC--D 86
TG CL C +TGG C+ C+ G+ GD LP G C PC C PG+ F C D
Sbjct: 892 TGTCLGCRDHTGGEHCERCIAGFHGDP-RLPYGGQCRPCPCPEGPGS--QRHFATSCHRD 948
Query: 87 QLTGQ--CSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNR-TCDPITGQC 141
+ Q C C+ G C+ C GH+ S G C+ C+C + + CDP +GQC
Sbjct: 949 GYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQPCECGNIDPTDPDACDPHSGQC 1008
Query: 142 L-CRPGVTGTRCELCQPNHYGFSL-DGCKPCMCDPIGSNSLQCDPSGQC 188
L C G C C+P +G + C C C+ +G++ QC +C
Sbjct: 1009 LRCLHHTEGPHCAHCKPGFHGQAARQSCHRCNCNLLGTDPQQCPSPDRC 1057
Score = 249 (92.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 52/136 (38%), Positives = 74/136 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C + G +C C G+FG + + G C+ CQC GT+ T P CD+ +G
Sbjct: 437 SGQC-RCKEHVVGSRCQQCRDGFFGLSASDALG-CQRCQCDTRGTVPGGT--P-CDRNSG 491
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK V G C++C GH+ + GC+ CDCD G+L+ C+ TGQC CR + G
Sbjct: 492 ACFCKRLVTGRGCNRCLPGHWGLSHDLLGCRPCDCDIGGALDPQCNEATGQCRCRQHMVG 551
Query: 150 TRCELCQPNHYGFSLD 165
CE QP ++ LD
Sbjct: 552 RCCEQVQPGYFRPFLD 567
Score = 241 (89.9 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 50/141 (35%), Positives = 70/141 (49%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
++G C C+ + CD C P + L +G C+PC C+ P + + P C++ T
Sbjct: 1062 SSGQC-PCL-SQRDLSCDRCAPSW---NLTSGRG-CQPCACH-P----SRSRGPTCNEFT 1110
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+ G C +C+ H+ G C++CDCDP G C TG C CRPGV+G
Sbjct: 1111 GQCHCRTGFGGRTCSECQELHWGD-PGLQCRACDCDPRGIDTPQCHRSTGHCSCRPGVSG 1169
Query: 150 TRCELCQPNHYGFSLDGCKPC 170
RC+ C G C PC
Sbjct: 1170 VRCDQCARGFSGI-FPACHPC 1189
Score = 222 (83.2 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 60/172 (34%), Positives = 77/172 (44%)
Query: 14 LLCVGPPSDILKSVAGTTG-DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
L C P L S G CL C G +C+ C PGY+G P G C+ CQC
Sbjct: 783 LPCQCDPQGSLSSECNPHGGQCL-CKPAVVGRRCNICAPGYYGFG---PTG-CQACQCSP 837
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNR 132
G L + +C+ +GQC C+ G CD+C+ G + S C+ C C+ G +
Sbjct: 838 EGAL-----SGLCEATSGQCPCRTGAFGLRCDRCQRGQWGFPS---CRPCVCN--GHADE 887
Query: 133 TCDPITGQCL-CRPGVTGTRCELCQPNHYG---FSLDG-CKPCMCDPIGSNS 179
CD TG CL CR G CE C +G G C+PC C P G S
Sbjct: 888 -CDTHTGTCLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPC-PEGPGS 937
Score = 192 (72.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 55/184 (29%), Positives = 81/184 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-----CEPCQCYIPGTLETETFTPVCD 86
G C+ C +NT G C+ C ++ D P D C+ C+C+ G + F
Sbjct: 310 GACI-CKHNTRGLNCEQC-QDFYHDLPWHPAEDGHSHACKKCECH--GHAHSCHFDMAIY 365
Query: 87 QLTGQCS------CKPHVVGTNCDQCEVGHYNI----ISGEG-CKSCDCDPVGSLNR-TC 134
+G S C+ + G +C+ C Y + G C+SCDCDP+GS + C
Sbjct: 366 LASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRDPGVCRSCDCDPMGSQDGGRC 425
Query: 135 DP--------ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
DP ++GQC C+ V G+RC+ C+ +G S D +G QCD G
Sbjct: 426 DPHDDPALGLVSGQCRCKEHVVGSRCQQCRDGFFGLSAS-------DALGCQRCQCDTRG 478
Query: 187 QCPG 190
PG
Sbjct: 479 TVPG 482
Score = 185 (70.2 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 35/89 (39%), Positives = 45/89 (50%)
Query: 103 CDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
CD + ++ G C CDP GSL+ C+P GQCLC+P V G RC +C P +YGF
Sbjct: 767 CDPLLISLSTLLYN-GALPCQCDPQGSLSSECNPHGGQCLCKPAVVGRRCNICAPGYYGF 825
Query: 163 SLDGCKPCMCDPIGSNSLQCDPSGQCPGV 191
GC+ C QC P G G+
Sbjct: 826 GPTGCQAC----------QCSPEGALSGL 844
Score = 40 (19.1 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 61 PKGDCEPCQCYIPGTLETET-----FTPVC 85
P G P +IPGTL+ T PVC
Sbjct: 655 PCGHVLPKDDHIPGTLQPGTRYMVFLRPVC 684
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 317 (116.6 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 65/164 (39%), Positives = 89/164 (54%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C +C G +CD C GYFG +P G C+PC C G L+ +T CD LTG C
Sbjct: 817 CDRCPPGYTGSRCDRCSNGYFGRP-NIPGGSCQPCVC--SGNLD-QTAPLSCDPLTGACL 872
Query: 93 SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+ G +C++C G++ + + + C++C C GS++ C TGQC CR V G +
Sbjct: 873 RCRKGYGGADCERCADGYFGDALIAKNCQACQCHSNGSVSELCHQETGQCQCRQHVIGRQ 932
Query: 152 CELCQP-NHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC---PGV 191
C+ C +H +L GC PC C+ GS S CD SGQC PGV
Sbjct: 933 CDECMAGSHLQGAL-GCVPCHCNSFGSKSFDCDESGQCRCQPGV 975
Score = 308 (113.5 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 68/173 (39%), Positives = 89/173 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C +T GP C C PGY+GDA DC+PC C P F+P C ++ G
Sbjct: 755 TGHCLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPCAC--PLLSPANNFSPTC-RVDG 811
Query: 91 Q----CS-CKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRT----CDPITG 139
+ C C P G+ CD+C G++ I G C+ C C G+L++T CDP+TG
Sbjct: 812 RGEVICDRCPPGYTGSRCDRCSNGYFGRPNIPGGSCQPCVCS--GNLDQTAPLSCDPLTG 869
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQC-DPSGQC 188
CL CR G G CE C ++G +L C+ C C GS S C +GQC
Sbjct: 870 ACLRCRKGYGGADCERCADGYFGDALIAKNCQACQCHSNGSVSELCHQETGQC 922
Score = 274 (101.5 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 57/159 (35%), Positives = 77/159 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C G +CD C G+F + +G C PCQC G CD TG
Sbjct: 966 SGQC-RCQPGVTGQKCDRCAAGHF----SFQEGGCTPCQCAHVGNN--------CDASTG 1012
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC C P+ VG CD+C H+ GCK C C+ +GS+ + C+ TG C+CR G
Sbjct: 1013 QCICPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQQCNLNTGCCMCREQFRGE 1072
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C+ C+ + F C C C GS+ CD SG C
Sbjct: 1073 KCDECKLGYRDFPQ--CISCQCSAAGSSLDTCDSESGLC 1109
Score = 241 (89.9 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 47/136 (34%), Positives = 67/136 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
T C C +NT G +C+ C G++G DC+PC C P F+P C Q G
Sbjct: 1410 TSICQNCQHNTVGDKCERCAAGFYGVVRGFTD-DCKPCAC--PLLNPENNFSPTC-QTEG 1465
Query: 91 ----QCS-CKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
+C+ C G +C++C G + + G C+ C CDP G+ CD +GQC C
Sbjct: 1466 FNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKCDPYGAFPSACDSHSGQCQC 1525
Query: 144 RPGVTGTRCELCQPNH 159
RPG +G +C+ C H
Sbjct: 1526 RPGASGLKCDQCMERH 1541
Score = 236 (88.1 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 53/156 (33%), Positives = 71/156 (45%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP--KGDCEPCQCYIPGTLETETFTPVCDQLT 89
G CL C NTGG C +C+ G++ + P C PC C + G L + T P Q T
Sbjct: 361 GVCLGCSENTGGINCQSCIDGFYRPSGVSPLEPWPCTPCTCDLRGALHS-TCVPDESQAT 419
Query: 90 -----GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
G C CKP G CD+C G+ C+ C C GS+N+ DP C+C+
Sbjct: 420 TDLPVGSCICKPGYAGERCDRCVFGYAGFPQ---CERCRCSSDGSVNQ--DPCQPPCVCK 474
Query: 145 PGVTGTRCELCQPNHYGFS---LDGCKPCMCDPIGS 177
V G C+ C+ Y S + GC C C + S
Sbjct: 475 EHVEGRDCDRCKQGFYHLSGGRVRGCDKCYCSGVAS 510
Score = 236 (88.1 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 62/179 (34%), Positives = 87/179 (48%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
AG C +C G C+ C GY + +G CE CQC+ G TE CD
Sbjct: 703 AGAVEVC-QCPPGYDGTSCEMCALGYRRVNGTIYQGVCELCQCH--G--HTER----CDD 753
Query: 88 LTGQC-SCKPHVVGTNCDQCEVGHYNIIS---GEGCKSCDC---DPVGSLNRTCDPITGQ 140
LTG C C+ H VG NC QC G+Y + + C+ C C P + + TC + G+
Sbjct: 754 LTGHCLGCRDHTVGPNCGQCAPGYYGDATRGTADDCQPCACPLLSPANNFSPTCR-VDGR 812
Query: 141 ----C-LCRPGVTGTRCELCQPNHYGF-SLDG--CKPCMCDP-IGSNS-LQCDP-SGQC 188
C C PG TG+RC+ C ++G ++ G C+PC+C + + L CDP +G C
Sbjct: 813 GEVICDRCPPGYTGSRCDRCSNGYFGRPNIPGGSCQPCVCSGNLDQTAPLSCDPLTGAC 871
Score = 230 (86.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 52/161 (32%), Positives = 77/161 (47%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+TG C+ C NT G +CD C P ++G ++ C+PC C G++ + C+ T
Sbjct: 1010 STGQCI-CPPNTVGERCDKCAPNHWGHDIST---GCKPCGCNALGSVAQQ-----CNLNT 1060
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG---------Q 140
G C C+ G CD+C++G+ + C SC C GS TCD +G Q
Sbjct: 1061 GCCMCREQFRGEKCDECKLGYRDFPQ---CISCQCSAAGSSLDTCDSESGLCACADRSGQ 1117
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSN 178
C C+ V G +CE C+ +G S GC C C + S+
Sbjct: 1118 CSCKANVEGQKCERCKSGSFGLSHRNPLGCSRCYCFGLSSS 1158
Score = 208 (78.3 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 58/177 (32%), Positives = 79/177 (44%)
Query: 36 KCIYNTG--GPQCDTCLPGYF-------GDALALPKGDCEPCQCYIPGTLETETFTPVCD 86
KC+ G G C+ C G++ G A G C CQC G ++ CD
Sbjct: 1356 KCVCPQGYAGLSCEECAAGFYRLSVLAGGSASRAGFGSCVRCQCN--GHSDS------CD 1407
Query: 87 QLTGQC-SCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDC---DPVGSLNRTCDPITG- 139
T C +C+ + VG C++C G Y ++ G + CK C C +P + + TC G
Sbjct: 1408 PETSICQNCQHNTVGDKCERCAAGFYGVVRGFTDDCKPCACPLLNPENNFSPTCQT-EGF 1466
Query: 140 ---QCL-CRPGVTGTRCELCQPNHYGFS--LDG-CKPCMCDPIGSNSLQCDP-SGQC 188
+C C G G CE C P +G L G C+ C CDP G+ CD SGQC
Sbjct: 1467 NEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKCDPYGAFPSACDSHSGQC 1523
Score = 174 (66.3 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 39/99 (39%), Positives = 45/99 (45%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C G C+ C PG+ GD L G CE C+C G F CD +GQC
Sbjct: 1471 CTACPEGYEGKHCERCAPGFHGDPGVLG-GRCEECKCDPYGA-----FPSACDSHSGQCQ 1524
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNR 132
C+P G CDQC H + EG SCD D G L R
Sbjct: 1525 CRPGASGLKCDQCMERH--VCGPEGIVSCDDDCAGLLIR 1561
Score = 168 (64.2 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 39/108 (36%), Positives = 54/108 (50%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG---EG-CKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
C C P GT+C+ C +G Y ++G +G C+ C C G R CD +TG CL CR
Sbjct: 709 CQCPPGYDGTSCEMCALG-YRRVNGTIYQGVCELCQCH--GHTER-CDDLTGHCLGCRDH 764
Query: 147 VTGTRCELCQPNHYGFSL----DGCKPCMCDPIGSNSLQCDPSGQCPG 190
G C C P +YG + D C+PC C P+ S + P+ + G
Sbjct: 765 TVGPNCGQCAPGYYGDATRGTADDCQPCAC-PLLSPANNFSPTCRVDG 811
Score = 157 (60.3 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 36/101 (35%), Positives = 49/101 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C+ C G +CD C+ GY G P+ CE C+C G++ + P
Sbjct: 425 GSCI-CKPGYAGERCDRCVFGYAG----FPQ--CERCRCSSDGSVNQDPCQP-------P 470
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSL 130
C CK HV G +CD+C+ G Y++ G GC C C V SL
Sbjct: 471 CVCKEHVEGRDCDRCKQGFYHLSGGRVRGCDKCYCSGVASL 511
Score = 149 (57.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 40/116 (34%), Positives = 48/116 (41%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIISGEG------CKSCDCDPVGSLNRTCDPI----- 137
G C C + G NC C G Y SG C C CD G+L+ TC P
Sbjct: 361 GVCLGCSENTGGINCQSCIDGFYRP-SGVSPLEPWPCTPCTCDLRGALHSTCVPDESQAT 419
Query: 138 ----TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS-NSLQCDPSGQC 188
G C+C+PG G RC+ C + GF C+ C C GS N C P C
Sbjct: 420 TDLPVGSCICKPGYAGERCDRCVFGYAGFPQ--CERCRCSSDGSVNQDPCQPPCVC 473
Score = 148 (57.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 40/115 (34%), Positives = 55/115 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG----TLETETFTPVCD 86
TG C+ C G +CD C GY D P+ C CQC G T ++E+ C
Sbjct: 1060 TGCCM-CREQFRGEKCDECKLGY-RD---FPQ--CISCQCSAAGSSLDTCDSESGLCACA 1112
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITG 139
+GQCSCK +V G C++C+ G + + GC C C G L+ +C TG
Sbjct: 1113 DRSGQCSCKANVEGQKCERCKSGSFGLSHRNPLGCSRCYC--FG-LSSSCTEATG 1164
Score = 35 (17.4 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 3 LDVHHVSV-MDI 13
+D+HHV+V +D+
Sbjct: 104 MDLHHVTVTLDL 115
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 318 (117.0 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 68/173 (39%), Positives = 96/173 (55%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG-D-CEPCQCYIPGTLETETFTPVCD 86
G G C C +NT G C+ C +F A P D C+PC C T+ T + +CD
Sbjct: 600 GGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDC---DTVGTRNGSILCD 656
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNR--TCDPITGQCL 142
Q+ GQC+CK HV G C+QC+ G YN+ + +GC C+C+ G+++ TC +GQC
Sbjct: 657 QIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTSGTVDGDITCHQNSGQCK 716
Query: 143 CRPGVTGTRCELCQPNHYGFSL-----D-GCKPCMCDPIGSNSLQCDP-SGQC 188
C+ V G RC+ C ++GF D GC+PC C+ GS + C+P SGQC
Sbjct: 717 CKANVIGLRCDHC---NFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQC 766
Score = 313 (115.2 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 64/167 (38%), Positives = 91/167 (54%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C +C G QCDTC ++G L +C+ C C G+L VC+ TG
Sbjct: 763 SGQC-ECKKEAKGLQCDTCRENFYG----LDVTNCKACDCDTAGSLPGT----VCNAKTG 813
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG--CKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
QC CKP+V G C++C G++ + C C+CD G++N + C+ TGQC C+ G
Sbjct: 814 QCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCPCKLG 873
Query: 147 VTGTRCELCQPNHYGFSLDG---CKPCMCDPIGS-NSLQCDP-SGQC 188
VTG RC C+P+ Y ++D C+ C CD +G+ CDP SGQC
Sbjct: 874 VTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTICDPISGQC 920
Score = 311 (114.5 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 60/161 (37%), Positives = 84/161 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C + G QC+ C G++ P G C PC C GT++ + C Q +GQ
Sbjct: 660 GQC-NCKRHVSGRQCNQCQNGFYNLQELDPDG-CSPCNCNTSGTVDGDI---TCHQNSGQ 714
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C CK +V+G CD C G + S GC+ C C+ GS+N+ C+P +GQC C+ G
Sbjct: 715 CKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECKKEAKG 774
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGS-NSLQCDP-SGQC 188
+C+ C+ N YG + CK C CD GS C+ +GQC
Sbjct: 775 LQCDTCRENFYGLDVTNCKACDCDTAGSLPGTVCNAKTGQC 815
Score = 292 (107.8 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 65/166 (39%), Positives = 84/166 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C KC N G +CD C G F + CEPCQC + G++ F C+ +G
Sbjct: 712 SGQC-KCKANVIGLRCDHCNFG-FKFLRSFNDVGCEPCQCNLHGSVNK--F---CNPHSG 764
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT-CDPITGQCLCRPGVTG 149
QC CK G CD C Y + CK+CDCD GSL T C+ TGQC+C+P V G
Sbjct: 765 QCECKKEAKGLQCDTCRENFYGL-DVTNCKACDCDTAGSLPGTVCNAKTGQCICKPNVEG 823
Query: 150 TRCELCQPNHYGFSLDG---CKPCMCDPIGS--NSLQCDPS-GQCP 189
+C C ++ + C PC CD G+ SL C+ S GQCP
Sbjct: 824 RQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCNKSTGQCP 869
Score = 260 (96.6 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 59/176 (33%), Positives = 88/176 (50%)
Query: 22 DILKSVAGT-----TGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIP 73
D L ++ GT +G CL C+ N G +C+ C PG++ G+A C PC C+
Sbjct: 903 DSLGTLPGTICDPISGQCL-CVPNRQGRRCNQCQPGFYISPGNATG-----CLPCSCHTT 956
Query: 74 GTLETETFTPVCDQLTGQCSCKP-HVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLN 131
G + +C+ LTGQC C+ + G CDQC+ ++ G C+ C+C G+LN
Sbjct: 957 GAVNH-----ICNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSGALN 1011
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQ 187
TC +TGQC C+ VTG++C+ C P+ ++ C P Q P GQ
Sbjct: 1012 ETCHLVTGQCFCKQFVTGSKCDACVPSASHLDVNNLLGCSKTPFQ----QPPPRGQ 1063
Score = 121 (47.7 bits), Expect = 0.00065, P = 0.00065
Identities = 50/188 (26%), Positives = 74/188 (39%)
Query: 30 TTGDCLKCIYN----TGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPG-----TL 76
TT +C+ + T G CD CLP Y F + +C+PCQC +
Sbjct: 529 TTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFNCKPCQCNSHSKSCHYNI 588
Query: 77 ETETFTPVCDQLTGQ---CS-CKPHVVGTNCDQCEVGHYNIISGEG-----CKSCDCDPV 127
+ F P + G C C+ + G NC+ C+ + + + CK CDCD V
Sbjct: 589 SVDPF-PF-EHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDCDTV 646
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM-----CDPIGSNSLQC 182
G+ N G LC G +C C+ + G + C+ DP G + C
Sbjct: 647 GTRN-------GSILCDQ--IGGQCN-CKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNC 696
Query: 183 DPSGQCPG 190
+ SG G
Sbjct: 697 NTSGTVDG 704
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 304 (112.1 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 58/154 (37%), Positives = 86/154 (55%)
Query: 22 DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETF 81
++ +S +G G CL C +T GP C+ C ++ + P+ C+PC C+ G+L +
Sbjct: 354 ELFRS-SGHGGRCLHCRAHTAGPHCERCQENFYRWS---PQTPCQPCDCHPAGSLRLQ-- 407
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
CD L G C CKP V+G CD+C G +++ G GC+ C C+PVGSL TCDP +G+C
Sbjct: 408 ---CDDL-GTCVCKPTVMGWKCDRCLSGFHSLSEG-GCRPCTCNPVGSLG-TCDPRSGRC 461
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G+ C+ C+P + GC C C
Sbjct: 462 HCKENVEGSLCDRCRPGAFNLQPHNPAGCSSCFC 495
Score = 293 (108.2 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 65/183 (35%), Positives = 90/183 (49%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD-----ALALPKGDCEPCQC 70
C G S+ G C +C +NT G C+ CLP +F D A +C PC C
Sbjct: 286 CNGHASECGPDEEGRLA-C-RCQHNTTGTDCERCLP-FFQDRPWARGTAEAANECLPCNC 342
Query: 71 YIPGTLETETFTPVCDQLTG---QC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
G E TF + +G +C C+ H G +C++C+ Y C+ CDC P
Sbjct: 343 --SGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYRWSPQTPCQPCDCHP 400
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
GSL CD + G C+C+P V G +C+ C + S GC+PC C+P+GS CDP S
Sbjct: 401 AGSLRLQCDDL-GTCVCKPTVMGWKCDRCLSGFHSLSEGGCRPCTCNPVGSLGT-CDPRS 458
Query: 186 GQC 188
G+C
Sbjct: 459 GRC 461
Score = 168 (64.2 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 39/111 (35%), Positives = 55/111 (49%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P+ L+ G C+ C G +CD CL G+ +L +G C PC C G+
Sbjct: 396 CDCHPAGSLRLQCDDLGTCV-CKPTVMGWKCDRCLSGFH----SLSEGGCRPCTCNPVGS 450
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDC 124
L T CD +G+C CK +V G+ CD+C G +N+ + GC SC C
Sbjct: 451 LGT------CDPRSGRCHCKENVEGSLCDRCRPGAFNLQPHNPAGCSSCFC 495
Score = 150 (57.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 52/171 (30%), Positives = 70/171 (40%)
Query: 37 CIYNTGGPQCDTCLPGYFGDA-LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCK 95
C G C++C PGY + L P C PC C GT CD TG C C
Sbjct: 689 CPQGYTGQFCESCAPGYKRNTPLGGPYASCVPCTCNQHGT---------CDPNTGVCLCG 739
Query: 96 PHVVGTNCDQCEVGHY-NIISGEG--CKSCDCDPVGSLNRTCDPITGQCLCR--P----- 145
H G +C++C G Y N +G+ C+ C C P G T P +G+ +C P
Sbjct: 740 HHTEGPSCERCLPGFYGNPFTGQADDCQPCPC-P-GQSACTTIPESGEVVCTHCPRSQRA 797
Query: 146 ---GVTGTRCEL--CQPNHYGFSLDGCKPCMCDPIGSNSLQ-CDPSGQCPG 190
G G EL + + F +PC +P ++ C P G PG
Sbjct: 798 RAVGCCGFLAELGPLSTSRWEFGNRRIQPCP-NPQSLVAVTPCSPRGHVPG 847
Score = 149 (57.5 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 40/105 (38%), Positives = 48/105 (45%)
Query: 92 CSCKPHVVGTNCDQCEVGHY-NIISG---EGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
CSC G C+ C G+ N G C C C+ G TCDP TG CLC
Sbjct: 687 CSCPQGYTGQFCESCAPGYKRNTPLGGPYASCVPCTCNQHG----TCDPNTGVCLCGHHT 742
Query: 148 TGTRCELCQPNHYG--FS--LDGCKPCMCDPIGSNSLQCDP-SGQ 187
G CE C P YG F+ D C+PC C P G ++ P SG+
Sbjct: 743 EGPSCERCLPGFYGNPFTGQADDCQPCPC-P-GQSACTTIPESGE 785
Score = 132 (51.5 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 46/161 (28%), Positives = 65/161 (40%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C ++T GP C+ CLPG++G+ DC+PC C PG T + +
Sbjct: 733 TGVCL-CGHHTEGPSCERCLPGFYGNPFTGQADDCQPCPC--PGQSACTTIPESGEVVCT 789
Query: 91 QC--SCKPHVVGTNCDQCEVGHYNIISGE-GCKSCD-C-DPVGSLNRT-CDP---ITGQC 141
C S + VG E+G + E G + C +P + T C P + G
Sbjct: 790 HCPRSQRARAVGCCGFLAELGPLSTSRWEFGNRRIQPCPNPQSLVAVTPCSPRGHVPGAL 849
Query: 142 LCRPGVTGTRCELCQPNH-YGFSLDG-----CKPCMCDPIG 176
C + C C+ G + G C C CD G
Sbjct: 850 RCSLNTLYSCCCCCREGQKLGVGVRGRPGSHCSRCSCDGSG 890
>UNIPROTKB|E1B7Q3 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008201 "heparin binding" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:DAAA02043571 IPI:IPI00715486
Ensembl:ENSBTAT00000061289 ArrayExpress:E1B7Q3 Uniprot:E1B7Q3
Length = 1193
Score = 302 (111.4 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 67/174 (38%), Positives = 90/174 (51%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP 83
L + G CL C NTGG C+ C G++ + C PC C G+L +P
Sbjct: 43 LHRLTGNGFRCLHCSDNTGGIHCERCKEGFYRHR---ERDRCLPCNCNSKGSL-----SP 94
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC--------KSCDCDPVGSLNRTCD 135
CD TG+CSCKP V G CD+C G ++ ++ GC CDCDP G + CD
Sbjct: 95 RCDN-TGRCSCKPGVTGDRCDRCLPG-FHTLTDAGCTQDRKLLDSKCDCDPAGIVG-PCD 151
Query: 136 PITGQCLCRPGVTGTRCELCQPNHY---GFSLDGCKPCMCDPIGSNSLQCDPSG 186
TG+C+C+P VTG RC+ C+P +Y G + +GC C C G +S C SG
Sbjct: 152 --TGRCVCKPAVTGERCDRCRPGYYHLDGRNPEGCTQCFC--YG-HSASCQSSG 200
Score = 229 (85.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 45/128 (35%), Positives = 69/128 (53%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALAL--PKGDCEPCQCYIPGTLETETFTPV-CDQLTG 90
C C + G +C+ C GYFGD P C+PCQC + + P CD+LTG
Sbjct: 481 CNNCPHGITGARCELCADGYFGDPFGEHGPVRPCQPCQC----SDNVDPSAPGNCDRLTG 536
Query: 91 QC-SCKPHVVGTNCDQCEVGHY-NIIS---GEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
+C C + G +CDQC+ G+Y + ++ + C++C+C+P+GS C G C+C+P
Sbjct: 537 RCLKCLHNTTGAHCDQCKAGYYGDPLAPNPADKCRACNCNPMGSEPVECRS-DGSCVCKP 595
Query: 146 GVTGTRCE 153
G G C+
Sbjct: 596 GFDGLNCD 603
Score = 222 (83.2 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 59/174 (33%), Positives = 83/174 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQL 88
TGDC N +C+ C G++ D P G C+PC C ++ ET VC+
Sbjct: 428 TGDCYSGDENPD-IECEDCPIGFYNDPHD-P-GSCKPCPCRNGFSCSVMPETEEVVCN-- 482
Query: 89 TGQCSCKPH-VVGTNCDQCEVGHYNIISGE-G----CKSCDC-DPVG-SLNRTCDPITGQ 140
+C PH + G C+ C G++ GE G C+ C C D V S CD +TG+
Sbjct: 483 ----NC-PHGITGARCELCADGYFGDPFGEHGPVRPCQPCQCSDNVDPSAPGNCDRLTGR 537
Query: 141 CL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
CL C TG C+ C+ +YG L D C+ C C+P+GS ++C G C
Sbjct: 538 CLKCLHNTTGAHCDQCKAGYYGDPLAPNPADKCRACNCNPMGSEPVECRSDGSC 591
Score = 194 (73.4 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 58/181 (32%), Positives = 79/181 (43%)
Query: 25 KSVAGTTGDCLK-CIYNTG--GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETET 80
+ V+GT ++ C+ G G C C GY D+ L P G C PC C G
Sbjct: 369 RPVSGTPAPWVEQCVCPVGYKGQFCHECASGYKRDSARLGPFGTCIPCNCQGGGA----- 423
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRTCDPITG 139
CD TG C C+ C +G YN G CK C C + + P T
Sbjct: 424 ----CDPDTGDCYSGDENPDIECEDCPIGFYNDPHDPGSCKPCPCR--NGFSCSVMPETE 477
Query: 140 QCLCR--P-GVTGTRCELCQPNHYG--FSLDG----CKPCMC-DPIGSNSL-QCDP-SGQ 187
+ +C P G+TG RCELC ++G F G C+PC C D + ++ CD +G+
Sbjct: 478 EVVCNNCPHGITGARCELCADGYFGDPFGEHGPVRPCQPCQCSDNVDPSAPGNCDRLTGR 537
Query: 188 C 188
C
Sbjct: 538 C 538
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 34/75 (45%), Positives = 39/75 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CLKC++NT G CD C GY+GD LA P C C C G+ E C +
Sbjct: 535 TGRCLKCLHNTTGAHCDQCKAGYYGDPLAPNPADKCRACNCNPMGSEPVE-----C-RSD 588
Query: 90 GQCSCKPHVVGTNCD 104
G C CKP G NCD
Sbjct: 589 GSCVCKPGFDGLNCD 603
>UNIPROTKB|E5RFQ2 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] GO:GO:0050873 GO:GO:0005605
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0001568 EMBL:Z99289 EMBL:AL590106
HGNC:HGNC:6484 ChiTaRS:LAMA4 IPI:IPI00983822
ProteinModelPortal:E5RFQ2 SMR:E5RFQ2 Ensembl:ENST00000521398
ArrayExpress:E5RFQ2 Bgee:E5RFQ2 Uniprot:E5RFQ2
Length = 331
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 63/184 (34%), Positives = 87/184 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C NT G C+ CL GY GD++ C+PC C +P F C + G
Sbjct: 95 SGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCPLP---HLANFAESCYRKNG 151
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQCL 142
+C C + G NC++C G+Y ++ G CK CDC DP + CD +TGQC
Sbjct: 152 AVRCICNENYAGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDP-NLIFEDCDEVTGQCR 210
Query: 143 -CRPGVTGTRCELCQPNHYGFS--LDGCKPCMCD--PIGSNSLQCDPSGQCPGVFMNRAE 197
C TG +CE C P +YG + C C C P S + +C G P M+
Sbjct: 211 NCLRNTTGFKCERCAPGYYGDARIAKNCAVCNCGGGPCDSVTGECLEEGFEPPTGMDCPT 270
Query: 198 MSSD 201
+S D
Sbjct: 271 ISCD 274
Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/166 (29%), Positives = 71/166 (42%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTN 102
P + C G+F L+ G+C PC C G E C +G C C+ + G +
Sbjct: 62 PAAEKCNAGFF-HTLS---GECVPCDCN--GN-SNE-----CLDGSGYCVHCQRNTTGEH 109
Query: 103 CDQCEVGHY-NIISG--EGCKSCDCD-P-VGSLNRTCDPITG--QCLCRPGVTGTRCELC 155
C++C G+ + I G + C+ C C P + + +C G +C+C G CE C
Sbjct: 110 CEKCLDGYIGDSIRGAPQFCQPCPCPLPHLANFAESCYRKNGAVRCICNENYAGPNCERC 169
Query: 156 QPNHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQCPGVFMN 194
P +YG L CK C C +L CD +GQC N
Sbjct: 170 APGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRN 215
Score = 119 (46.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 16 CVG--PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G P+ I + TG C C+ NT G +C+ C PGY+GDA + K +C C C
Sbjct: 189 CSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDA-RIAK-NCAVCNC--- 243
Query: 74 GTLETETFTPVCDQLTGQC 92
G P CD +TG+C
Sbjct: 244 GG------GP-CDSVTGEC 255
>UNIPROTKB|F1MYX9 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 CTD:3910 KO:K06241
OMA:QLDDYNA EMBL:DAAA02025880 EMBL:DAAA02025869 EMBL:DAAA02025870
EMBL:DAAA02025871 EMBL:DAAA02025872 EMBL:DAAA02025873
EMBL:DAAA02025874 EMBL:DAAA02025875 EMBL:DAAA02025876
EMBL:DAAA02025877 EMBL:DAAA02025878 EMBL:DAAA02025879
IPI:IPI01003454 RefSeq:NP_001192894.1 UniGene:Bt.33367
ProteinModelPortal:F1MYX9 PRIDE:F1MYX9 Ensembl:ENSBTAT00000011612
GeneID:529670 KEGG:bta:529670 NextBio:20875080 Uniprot:F1MYX9
Length = 1824
Score = 294 (108.6 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 65/181 (35%), Positives = 88/181 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C NT G C+ CL GY GDA+ P C+PC C +P F C + G
Sbjct: 95 SGLCVHCQRNTTGEHCEKCLDGYIGDAIRGPPRFCQPCPCPLP---HVANFAESCYRKNG 151
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQCL 142
+C CK + G NC++C G+Y ++ G CK CDC DP + CD +TGQC
Sbjct: 152 AVRCICKENYAGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDP-NLIFEDCDEVTGQCR 210
Query: 143 -CRPGVTGTRCELCQPNHYGFS--LDGCKPCMCD--PIGSNSLQC------DPSG-QCPG 190
C TG +CE C P +YG + C C C P S + +C P+G CP
Sbjct: 211 NCLRNTTGFKCERCAPGYYGDARRAKNCAACNCGGGPCDSITGECLEEGFESPTGTDCPT 270
Query: 191 V 191
+
Sbjct: 271 I 271
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 49/166 (29%), Positives = 69/166 (41%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTN 102
P C G+F A + +C PC C G E C +G C C+ + G +
Sbjct: 62 PAPKKCDAGFF---FAYSE-ECLPCDCN--GN-SNE-----CLDGSGLCVHCQRNTTGEH 109
Query: 103 CDQCEVGHY-NIISGEG--CKSCDCD-P-VGSLNRTCDPITG--QCLCRPGVTGTRCELC 155
C++C G+ + I G C+ C C P V + +C G +C+C+ G CE C
Sbjct: 110 CEKCLDGYIGDAIRGPPRFCQPCPCPLPHVANFAESCYRKNGAVRCICKENYAGPNCERC 169
Query: 156 QPNHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQCPGVFMN 194
P +YG L CK C C +L CD +GQC N
Sbjct: 170 APGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRN 215
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 32/92 (34%), Positives = 43/92 (46%)
Query: 16 CVG--PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G P+ I + TG C C+ NT G +C+ C PGY+GDA +C C C
Sbjct: 189 CSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARRAK--NCAACNC--- 243
Query: 74 GTLETETFTPVCDQLTGQCSCK--PHVVGTNC 103
G P CD +TG+C + GT+C
Sbjct: 244 GG------GP-CDSITGECLEEGFESPTGTDC 268
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 297 (109.6 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 61/159 (38%), Positives = 82/159 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C ++T GP+C+ C PGY+GDA DC+PC C+ T T D G
Sbjct: 1151 TGACQECQHHTEGPRCEQCQPGYYGDAQRGTPHDCQPCPCHGAPAAGQATHTCFLDT-DG 1209
Query: 91 Q--C-SCKPHVVGTNCDQCEVGHY-NIISGEGCK----------SCDCDPVGSLNRTCDP 136
C +C P G +C++C G+Y N G+ C+ C CDP GS++ CDP
Sbjct: 1210 HPTCDACSPGHSGRHCERCAPGYYGNPSQGQPCRRSGGQLPEQIGCGCDPQGSVSNQCDP 1269
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
GQC C+ V G C C+P+H+ S DGC PC C
Sbjct: 1270 -AGQCQCKAQVEGLTCSQCRPHHFHLSASNPDGCLPCFC 1307
Score = 217 (81.4 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 60/169 (35%), Positives = 72/169 (42%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQLT- 89
G CL C +NT GPQC+ C G+FGDA C PC C YI + F+ C T
Sbjct: 757 GHCLNCQHNTEGPQCNKCKAGFFGDATKATATACRPCPCPYIDAS---RRFSDTCFLDTD 813
Query: 90 GQ--C-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDP--ITGQ--- 140
GQ C +C P G C+ C G+ N I G C P+ CD TG
Sbjct: 814 GQATCDACAPGYTGRRCESCAAGYEGNPIQPNG----KCRPINQQIVRCDERGSTGSSGE 869
Query: 141 -CLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQCDPS 185
CLC+ V G C C + S DGC C C + S QC S
Sbjct: 870 ACLCKNNVVGRLCNECVAGSFHLSARNPDGCLKCFCMGV---SRQCTSS 915
Score = 199 (75.1 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 53/164 (32%), Positives = 72/164 (43%)
Query: 9 SVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC 68
S+ + L V P A +C +C G C C PGY L G CE C
Sbjct: 1485 SISGVSLEVAQPGPSEGPRALEVEEC-RCPPGYVGSSCQDCAPGYTRTGSGLYLGHCELC 1543
Query: 69 QCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-NIISG--EGCKSCDC 124
+C + +C TG CS C+ H G C+QC G+Y + +G E C+ C C
Sbjct: 1544 EC--------NGHSDLCHPETGACSQCQHHAAGEFCEQCAPGYYGDATAGTPEDCQPCAC 1595
Query: 125 ---DPVGSLNRTCDPI-TG--QCL-CRPGVTGTRCELCQPNHYG 161
+P +RTC+ + G +C C PG TG CE C P + G
Sbjct: 1596 PLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPGYVG 1639
Score = 188 (71.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 67/203 (33%), Positives = 81/203 (39%)
Query: 10 VMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ 69
V I + V P D + A C C GP C C GY L G CE C
Sbjct: 1081 VSGISMDVAVPEDTGQDPAREVEQCA-CPPGYRGPSCQDCDAGYTRMPSGLYLGTCERCS 1139
Query: 70 CY-IPGTLETETFT-PVCDQLT-G-QCS-CKPHVVGT-------NCDQCEVGHYNIISGE 117
C+ E ET C T G +C C+P G +C C H +G+
Sbjct: 1140 CHGHTEVCEPETGACQECQHHTEGPRCEQCQPGYYGDAQRGTPHDCQPCPC-HGAPAAGQ 1198
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDG--CK------P 169
+C D G + TCD C PG +G CE C P +YG G C+ P
Sbjct: 1199 ATHTCFLDTDG--HPTCDA------CSPGHSGRHCERCAPGYYGNPSQGQPCRRSGGQLP 1250
Query: 170 ----CMCDPIGSNSLQCDPSGQC 188
C CDP GS S QCDP+GQC
Sbjct: 1251 EQIGCGCDPQGSVSNQCDPAGQC 1273
Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 47/138 (34%), Positives = 65/138 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL-T 89
TG C +C ++ G C+ C PGY+GDA A DC+PC C P T F+ C+ L
Sbjct: 1556 TGACSQCQHHAAGEFCEQCAPGYYGDATAGTPEDCQPCAC--PLTNPENMFSRTCESLGA 1613
Query: 90 G--QCS-CKPHVVGTNCDQCE---VGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G +C+ C+P G C+QC VG+ N+ G D P L P T +
Sbjct: 1614 GGYRCTACEPGYTGQYCEQCAPGYVGNPNVPGGRCLPQADQAP---LVVQVHP-TRSVVP 1669
Query: 144 RPGVTGTRCELC-QPNHY 160
+ G RC++ P HY
Sbjct: 1670 QGGPHSLRCQVSGSPPHY 1687
Score = 154 (59.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 48/171 (28%), Positives = 71/171 (41%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPK-GDCEPCQCYIPGTLETETFTPVCD 86
A + +C +C G C++C +F P G C C C G + CD
Sbjct: 704 AHSVEEC-RCPIGYSGLSCESC-DAHFTRVPGGPYLGTCSGCNCN--GHASS------CD 753
Query: 87 QLTGQC-SCKPHVVGTNCDQCEVGHYNIIS---GEGCKSCDCDPVGSLNR---TCDPIT- 138
+ G C +C+ + G C++C+ G + + C+ C C + + R TC T
Sbjct: 754 PVYGHCLNCQHNTEGPQCNKCKAGFFGDATKATATACRPCPCPYIDASRRFSDTCFLDTD 813
Query: 139 GQ--C-LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
GQ C C PG TG RCE C + G + C PI ++CD G
Sbjct: 814 GQATCDACAPGYTGRRCESCAAGYEGNPIQPNGKCR--PINQQIVRCDERG 862
Score = 151 (58.2 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 37/107 (34%), Positives = 50/107 (46%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE--G-CKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
+C C P VG++C C G+ SG G C+ C+C+ L C P TG C C+
Sbjct: 1509 ECRCPPGYVGSSCQDCAPGYTRTGSGLYLGHCELCECNGHSDL---CHPETGACSQCQHH 1565
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC---DPIGSNSLQCDPSG 186
G CE C P +YG + G C+PC C +P S C+ G
Sbjct: 1566 AAGEFCEQCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLG 1612
Score = 63 (27.2 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC 70
G++G+ C N G C+ C+ G F + P G C C C
Sbjct: 865 GSSGEACLCKNNVVGRLCNECVAGSFHLSARNPDG-CLKCFC 905
>MGI|MGI:109321 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IDA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 MGI:MGI:109321
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
eggNOG:NOG247347 GO:GO:0005606 CTD:3910 HOVERGEN:HBG052299
KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB ChiTaRS:LAMA4 EMBL:U58950
EMBL:Y09827 EMBL:U59865 EMBL:BC115942 EMBL:U88352 EMBL:U69176
IPI:IPI00223446 RefSeq:NP_034811.2 UniGene:Mm.258065
ProteinModelPortal:P97927 SMR:P97927 STRING:P97927
PhosphoSite:P97927 PaxDb:P97927 PRIDE:P97927
Ensembl:ENSMUST00000019992 GeneID:16775 KEGG:mmu:16775
UCSC:uc007evq.2 HOGENOM:HOG000113278 InParanoid:Q14BF2
NextBio:290616 Bgee:P97927 CleanEx:MM_LAMA4 Genevestigator:P97927
GermOnline:ENSMUSG00000019846 Uniprot:P97927
Length = 1816
Score = 289 (106.8 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 64/170 (37%), Positives = 84/170 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G CL C NT G C+ CL GY GD++ C+PC C +P F C + G
Sbjct: 95 SGFCLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPCPCPLP---HLANFAESCYRKNG 151
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQCL 142
+C CK + VG NC++C G+Y ++ G CK CDC DP + CD ITGQC
Sbjct: 152 AVRCICKENYVGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDP-NLIFEDCDEITGQCR 210
Query: 143 -CRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCDP-SGQC 188
C TG +CE C P +YG + C C C G CD +G+C
Sbjct: 211 NCLRNTTGFKCERCAPGYYGDARTAKNCAVCNC---GGGP--CDSVTGEC 255
Score = 198 (74.8 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C+ C N GP C+ C PGY+G+ L + C+ C C G + CD++TGQC
Sbjct: 155 CI-CKENYVGPNCERCAPGYYGNPLLIGS-TCKKCDC--SGNSDPNLIFEDCDEITGQCR 210
Query: 93 SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
+C + G C++C G+Y + + + C C+C G CD +TG+CL T
Sbjct: 211 NCLRNTTGFKCERCAPGYYGDARTAKNCAVCNCG--GG---PCDSVTGECLEEGFEVPTG 265
Query: 152 CELC 155
C+ C
Sbjct: 266 CDKC 269
Score = 150 (57.9 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 47/166 (28%), Positives = 68/166 (40%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTN 102
P + C G+F G+C PC C G C +G C C+ + G +
Sbjct: 62 PAAERCDAGFFRTL----SGECAPCDCN--GNSHE------CLDGSGFCLHCQRNTTGEH 109
Query: 103 CDQCEVGHY-NIISGEG--CKSCDCD-P-VGSLNRTCDPITG--QCLCRPGVTGTRCELC 155
C++C G+ + I G C+ C C P + + +C G +C+C+ G CE C
Sbjct: 110 CEKCLDGYIGDSIRGTPRFCQPCPCPLPHLANFAESCYRKNGAVRCICKENYVGPNCERC 169
Query: 156 QPNHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQCPGVFMN 194
P +YG L CK C C +L CD +GQC N
Sbjct: 170 APGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEITGQCRNCLRN 215
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/93 (36%), Positives = 45/93 (48%)
Query: 16 CVG--PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G P+ I + TG C C+ NT G +C+ C PGY+GDA +C C C
Sbjct: 189 CSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKCERCAPGYYGDARTAK--NCAVCNC--- 243
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQC 106
G P CD +TG+C + V T CD+C
Sbjct: 244 GG------GP-CDSVTGECLEEGFEVPTGCDKC 269
>UNIPROTKB|F1PR66 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 OMA:QLDDYNA EMBL:AAEX03008620
Ensembl:ENSCAFT00000006483 Uniprot:F1PR66
Length = 1760
Score = 288 (106.4 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 62/170 (36%), Positives = 84/170 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C NT G C+ CL GY GD++ P C+PC C +P F C + G
Sbjct: 38 SGFCVHCQRNTTGEHCEKCLDGYIGDSIRGPPRFCQPCPCPLP---YVANFAESCYRKNG 94
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQCL 142
+C CK + G NC++C G+Y ++ G CK CDC DP + CD +TGQC
Sbjct: 95 AVRCICKENYAGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDP-NLIFEDCDEVTGQCR 153
Query: 143 -CRPGVTGTRCELCQPNHYGFS--LDGCKPCMCDPIGSNSLQCDP-SGQC 188
C TG +CE C P +YG + C C C G CD +G+C
Sbjct: 154 NCLRNTTGFKCERCAPGYYGDARIAKNCAVCNC---GGGP--CDSVTGEC 198
Score = 196 (74.1 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 41/124 (33%), Positives = 60/124 (48%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C+ C N GP C+ C PGY+G+ L + C+ C C G + CD++TGQC
Sbjct: 98 CI-CKENYAGPNCERCAPGYYGNPLLIGS-TCKKCDC--SGNSDPNLIFEDCDEVTGQCR 153
Query: 93 SCKPHVVGTNCDQCEVGHYNIIS-GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
+C + G C++C G+Y + C C+C G CD +TG+CL T
Sbjct: 154 NCLRNTTGFKCERCAPGYYGDARIAKNCAVCNCG--GG---PCDSVTGECLEEGFEPPTG 208
Query: 152 CELC 155
C+ C
Sbjct: 209 CDKC 212
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 34/93 (36%), Positives = 46/93 (49%)
Query: 16 CVG--PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G P+ I + TG C C+ NT G +C+ C PGY+GDA + K +C C C
Sbjct: 132 CSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDA-RIAK-NCAVCNC--- 186
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQC 106
G P CD +TG+C + T CD+C
Sbjct: 187 GG------GP-CDSVTGECLEEGFEPPTGCDKC 212
>UNIPROTKB|E1BXK1 [details] [associations]
symbol:LAMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] GO:GO:0008201 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610
OMA:DRCLPCN EMBL:AADN02034184 EMBL:AADN02034183 IPI:IPI00588334
Ensembl:ENSGALT00000007372 ArrayExpress:E1BXK1 Uniprot:E1BXK1
Length = 1175
Score = 285 (105.4 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 60/152 (39%), Positives = 83/152 (54%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQC 92
CL C+ NT G C+ C GY+ GDC PC+C+ G+L T+ CD G+C
Sbjct: 51 CLGCLGNTAGAHCERCKEGYYRQQ----DGDCCLPCRCHPQGSLSTQ-----CDS-NGRC 100
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGC-------KS--CDCDPVGSLNRTCDPITGQCLC 143
SC+P V+G CD+C+ G +++ S GC +S C CDP G T D ++G+C+C
Sbjct: 101 SCRPGVMGEKCDRCQPGFHSL-SEAGCCPHCPRCRSQLCACDPAG----TGDCVSGRCIC 155
Query: 144 RPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
+ GVTG RC+ C+ N Y GC PC C
Sbjct: 156 KVGVTGERCDRCKQNFYNLDARNPAGCSPCFC 187
Score = 213 (80.0 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 39/97 (40%), Positives = 53/97 (54%)
Query: 91 QC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
+C C + G +C++C+ G+Y G+ C C C P GSL+ CD G+C CRPGV G
Sbjct: 50 RCLGCLGNTAGAHCERCKEGYYRQQDGDCCLPCRCHPQGSLSTQCDS-NGRCSCRPGVMG 108
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
+C+ CQP + S GC P C S CDP+G
Sbjct: 109 EKCDRCQPGFHSLSEAGCCP-HCPRCRSQLCACDPAG 144
Score = 206 (77.6 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 43/125 (34%), Positives = 64/125 (51%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C C GP+C+ C GYFGD A C PCQC +E CD+ TG+C
Sbjct: 478 CDHCPPGAAGPRCEFCADGYFGDPAA--SQPCRPCQCN--SNVEPNAVGN-CDRRTGECL 532
Query: 93 SCKPHVVGTNCDQCEVGHY-NIIS---GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C + G +C++C+ G + N ++ + C++C+C+ VG+ C G C+C+PG
Sbjct: 533 KCIYNTAGFHCERCKDGFFGNPLAPNPADKCRACNCNSVGAEPLMCRN-DGSCICKPGFG 591
Query: 149 GTRCE 153
G CE
Sbjct: 592 GPNCE 596
Score = 177 (67.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 52/166 (31%), Positives = 73/166 (43%)
Query: 43 GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
G C+ C GY DA + P C PC C+ G +CD TG+C VG
Sbjct: 388 GQFCERCAAGYRRDAPHMGPFSICVPCNCHGGG---------ICDPDTGECYSGDENVG- 437
Query: 102 NCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQ----C-LCRPGVTGTRCELC 155
N C G Y + C++C C G ++C + GQ C C PG G RCE C
Sbjct: 438 NSISCPFGSYRDPRPPHSCRACPC---GH-GQSCSVLPGQEEVVCDHCPPGAAGPRCEFC 493
Query: 156 QPNHYG--FSLDGCKPCMCDP-IGSNSL-QCDP-SGQCPGVFMNRA 196
++G + C+PC C+ + N++ CD +G+C N A
Sbjct: 494 ADGYFGDPAASQPCRPCQCNSNVEPNAVGNCDRRTGECLKCIYNTA 539
Score = 172 (65.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/168 (27%), Positives = 71/168 (42%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG+C N G +C G + D P C C C G ++ + P +++
Sbjct: 426 TGECYSGDENVGNSI--SCPFGSYRDPR--PPHSCRACPC---GHGQSCSVLPGQEEVV- 477
Query: 91 QCS-CKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRT--CDPITGQCL-CRP 145
C C P G C+ C G++ + + + C+ C C+ N CD TG+CL C
Sbjct: 478 -CDHCPPGAAGPRCEFCADGYFGDPAASQPCRPCQCNSNVEPNAVGNCDRRTGECLKCIY 536
Query: 146 GVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
G CE C+ +G L D C+ C C+ +G+ L C G C
Sbjct: 537 NTAGFHCERCKDGFFGNPLAPNPADKCRACNCNSVGAEPLMCRNDGSC 584
Score = 167 (63.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 34/78 (43%), Positives = 41/78 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+CLKCIYNT G C+ C G+FG+ LA P C C C G P+ +
Sbjct: 528 TGECLKCIYNTAGFHCERCKDGFFGNPLAPNPADKCRACNCNSVGA------EPLMCRND 581
Query: 90 GQCSCKPHVVGTNCDQCE 107
G C CKP G NC+Q E
Sbjct: 582 GSCICKPGFGGPNCEQSE 599
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/99 (36%), Positives = 49/99 (49%)
Query: 114 ISGEGCKSCDCDPVGSLNRTC--D----PITG---QCL-CRPGVTGTRCELCQPNHYGFS 163
+S G ++CDC+ ++R C D TG +CL C G CE C+ +Y
Sbjct: 18 LSTSGGEACDCN---GMSRQCVFDWQLLMETGNGYRCLGCLGNTAGAHCERCKEGYYR-Q 73
Query: 164 LDG--CKPCMCDPIGSNSLQCDPSGQC---PGVFMNRAE 197
DG C PC C P GS S QCD +G+C PGV + +
Sbjct: 74 QDGDCCLPCRCHPQGSLSTQCDSNGRCSCRPGVMGEKCD 112
Score = 87 (35.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 28 AGTTGDCL--KCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCY 71
AGT GDC+ +CI G G +CD C ++ P G C PC CY
Sbjct: 143 AGT-GDCVSGRCICKVGVTGERCDRCKQNFYNLDARNPAG-CSPCFCY 188
Score = 77 (32.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 34/126 (26%), Positives = 43/126 (34%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEG----CKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+C C G C++C G+ G C C+C G CDP TG+C
Sbjct: 379 RCQCPDGYQGQFCERCAAGYRRDAPHMGPFSICVPCNCHGGG----ICDPDTGECYSGDE 434
Query: 147 VTGTRCELCQPNHYG-----FSLDGCKPC----MCDPI-GSNSLQCDPSGQCP-GVFMNR 195
G C Y S C PC C + G + CD CP G R
Sbjct: 435 NVGNSIS-CPFGSYRDPRPPHSCRAC-PCGHGQSCSVLPGQEEVVCD---HCPPGAAGPR 489
Query: 196 AEMSSD 201
E +D
Sbjct: 490 CEFCAD 495
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 288 (106.4 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 70/193 (36%), Positives = 91/193 (47%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETF 81
K V G C+ C +NT G C+ C GYF G + G C PC C P +
Sbjct: 378 KGVYAGGGVCINCQHNTAGVNCEKCAKGYFRPHGVPVDALHG-CIPCSCD-PERADD--- 432
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI-------------------ISGEGCKSC 122
CDQ +G C CKP+ G C+ C G+YN ++G K C
Sbjct: 433 ---CDQGSGHCHCKPNFSGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGN-IKGC 488
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQC 182
DC+ G L CD G+CLCRPGV G +C+ C+ Y F + C+ C C IGS + C
Sbjct: 489 DCNLEGVLPEICDD-RGRCLCRPGVEGPQCDSCRSGSYSFPI--CQACQCSTIGSYPVPC 545
Query: 183 DP-SGQC---PGV 191
DP +GQC PG+
Sbjct: 546 DPGNGQCDCLPGI 558
Score = 261 (96.9 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 56/154 (36%), Positives = 76/154 (49%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGT 101
G C C PGY+ D +LP G C PC C + C +G C +C+ + G
Sbjct: 1662 GDSCQGCRPGYYWDNKSLPVGRCVPCNC--------NGHSNRCQDGSGICINCQHNTAGE 1713
Query: 102 NCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPN 158
+C++C+ GHY N I G C+ C C S C G +C C+PG TGT+CE C P
Sbjct: 1714 HCERCQAGHYGNAIHGS-CRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPG 1772
Query: 159 HYGF--SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
++G G C+PC C+ G CDP +G C
Sbjct: 1773 YFGNPQKFGGSCQPCNCNSNGQLG-PCDPLTGDC 1805
Score = 252 (93.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 59/160 (36%), Positives = 75/160 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C +T PQC+ C F P C+ C C GT+E CD+ +G
Sbjct: 1321 TGKCL-CPPHTVRPQCEVCEMNSFNFH---PVAGCDVCNCSRKGTIEAAVSE--CDRDSG 1374
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP V G CD+C G + C C C+ G+ CDP TG C+C+ V G
Sbjct: 1375 QCRCKPRVTGQQCDKCAPGLLPVPLK--CVPCSCNRDGTEPSVCDPETGACMCKENVEGP 1432
Query: 151 RCELCQPNHYGFSLD-----GCKPCMCDPIGSNSLQCDPS 185
+C+LC+ F LD GC C C G N+ C S
Sbjct: 1433 QCQLCREG--SFYLDPTNPKGCTKCFC--FGVNT-DCQSS 1467
Score = 247 (92.0 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 55/149 (36%), Positives = 71/149 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C + P C C P Y+ A P+G C CQC+ GTL C Q G
Sbjct: 594 GYC-QCKQHVASPTCSVCKPLYWNLAKENPRG-CSECQCHEAGTLSG---IGECGQEDGD 648
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
CSCK HV G CD CE G +++ GC+ C CD G+L C +G C CR V G
Sbjct: 649 CSCKAHVTGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVCQCREHVEG 708
Query: 150 TRCELCQPNHYGFSLDGCKPCMCDPIGSN 178
+C+ + N+Y L K + D G N
Sbjct: 709 KQCQRPENNYYFPDLHHMKYEVEDGTGPN 737
Score = 236 (88.1 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 50/141 (35%), Positives = 70/141 (49%)
Query: 52 GYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY 111
GY+G P C+PC C G +C+++TG+C C PH V C+ CE+ +
Sbjct: 1300 GYYG----FPY--CKPCNC---GRR-------LCEEVTGKCLCPPHTVRPQCEVCEMNSF 1343
Query: 112 NIISGEGCKSCDCDPVGSLNRT---CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
N GC C+C G++ CD +GQC C+P VTG +C+ C P L C
Sbjct: 1344 NFHPVAGCDVCNCSRKGTIEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGLLPVPLK-CV 1402
Query: 169 PCMCDPIGSNSLQCDP-SGQC 188
PC C+ G+ CDP +G C
Sbjct: 1403 PCSCNRDGTEPSVCDPETGAC 1423
Score = 231 (86.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 54/162 (33%), Positives = 72/162 (44%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALP-------------KGDCEPCQCYIPGT 75
+G C C N G C+TC GY F L +P G+ + C C + G
Sbjct: 437 SGHC-HCKPNFSGDYCETCADGYYNFPFCLRIPVFPNYTPSPEDPVAGNIKGCDCNLEGV 495
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L +CD G+C C+P V G CD C G Y+ C++C C +GS CD
Sbjct: 496 LPE-----ICDD-RGRCLCRPGVEGPQCDSCRSGSYSFPI---CQACQCSTIGSYPVPCD 546
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
P GQC C PG+TG +C+ C Y F +C P G+
Sbjct: 547 PGNGQCDCLPGITGRQCDRCLSGAYDFPYCQGSGSVCHPAGT 588
Score = 215 (80.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 44/129 (34%), Positives = 66/129 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
+G C+ C +NT G C+ C G++G+A+ G C C C P T +F C D
Sbjct: 1700 SGICINCQHNTAGEHCERCQAGHYGNAI---HGSCRVCPC--P---HTNSFATGCAVDGG 1751
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+C+CKP GT C++C G++ G C+ C+C+ G L CDP+TG C+ +
Sbjct: 1752 AVRCACKPGYTGTQCERCAPGYFGNPQKFGGSCQPCNCNSNGQLG-PCDPLTGDCVNQEP 1810
Query: 147 VTGTRCELC 155
G+ E C
Sbjct: 1811 KDGSPAEEC 1819
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 51/165 (30%), Positives = 68/165 (41%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C+ G QCD CL G + G C+ GTL D G
Sbjct: 550 GQC-DCLPGITGRQCDRCLSGAYDFPYCQGSGSV----CHPAGTL---------DSSLGY 595
Query: 92 CSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPGV 147
C CK HV C C+ ++N+ + GC C C G+L+ C G C C+ V
Sbjct: 596 CQCKQHVASPTCSVCKPLYWNLAKENPRGCSECQCHEAGTLSGIGECGQEDGDCSCKAHV 655
Query: 148 TGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCD-PSGQC 188
TG C+ C+ + GC+ C CD G+ + C PSG C
Sbjct: 656 TGDACDTCEDGFFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGVC 700
Score = 157 (60.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/104 (34%), Positives = 48/104 (46%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHY--NIISGEG-CKSCDCDPVGSLNRTCDPITGQCL-C 143
L C+C P G +C C G+Y N G C C+C+ G NR C +G C+ C
Sbjct: 1650 LVEMCACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCN--GHSNR-CQDGSGICINC 1706
Query: 144 RPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
+ G CE CQ HYG ++ G C+ C C S + C G
Sbjct: 1707 QHNTAGEHCERCQAGHYGNAIHGSCRVCPCPHTNSFATGCAVDG 1750
Score = 153 (58.9 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 35/110 (31%), Positives = 51/110 (46%)
Query: 83 PV-CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
PV CD GQC C P + G CD+C G Y+ +G S C P G+L D G C
Sbjct: 542 PVPCDPGNGQCDCLPGITGRQCDRCLSGAYDFPYCQGSGSV-CHPAGTL----DSSLGYC 596
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGV 191
C+ V C +C+P ++ + + +P G + QC +G G+
Sbjct: 597 QCKQHVASPTCSVCKPLYWNLAKE-------NPRGCSECQCHEAGTLSGI 639
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 30/95 (31%), Positives = 44/95 (46%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+C P ++ + G ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 1733 VCPCPHTNSFATGCAVDGGAVRCACKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNS 1791
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
G L P CD LTG C + G+ ++C+
Sbjct: 1792 NGQLG-----P-CDPLTGDCVNQEPKDGSPAEECD 1820
>MGI|MGI:99913 [details] [associations]
symbol:Lamc2 "laminin, gamma 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISO] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005607 "laminin-2 complex" evidence=ISO]
[GO:0005610 "laminin-5 complex" evidence=IDA] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] MGI:MGI:99913 GO:GO:0008201 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 HOGENOM:HOG000019301 GO:GO:0005610
eggNOG:NOG285700 HOVERGEN:HBG062127 OrthoDB:EOG4ZCT3N EMBL:U43327
IPI:IPI00117115 UniGene:Mm.329272 ProteinModelPortal:Q61092
SMR:Q61092 STRING:Q61092 PhosphoSite:Q61092 PRIDE:Q61092
UCSC:uc007czr.1 InParanoid:Q61092 PMAP-CutDB:Q61092
CleanEx:MM_LAMC2 Genevestigator:Q61092
GermOnline:ENSMUSG00000026479 Uniprot:Q61092
Length = 1191
Score = 280 (103.6 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 55/150 (36%), Positives = 79/150 (52%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
CL C NT G C+ C G++ + C PC C+ G+L CD +GQC
Sbjct: 53 CLNCNDNTAGVHCERCREGFYRHR---DRDRCLPCNCHSKGSLSAG-----CDN-SGQCR 103
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGC--------KSCDCDPVGSLNRTCDPITGQCLCRP 145
CKP V G CD+C+ G +++++ GC CDCDP G ++ CD +G+C+C+P
Sbjct: 104 CKPGVTGQRCDRCQPG-FHMLTDAGCTRDQGQLDSKCDCDPAG-ISGPCD--SGRCVCKP 159
Query: 146 GVTGTRCELCQPNHYGFSL---DGCKPCMC 172
VTG RC+ C+P +Y +GC C C
Sbjct: 160 AVTGERCDRCRPGYYHLDRANPEGCTQCFC 189
Score = 211 (79.3 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ-CYIPGTLETETFTPVCDQLTGQC 92
C C G +C+ C G+FGD +G PCQ C ++ + CDQLTG+C
Sbjct: 481 CNNCPPGVTGARCELCADGFFGDPFG-ERGPVRPCQRCQCNNNVDPNA-SGNCDQLTGRC 538
Query: 93 -SCKPHVVGTNCDQCEVGHY-NIIS---GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C + G CDQC+ G++ + ++ + C++C+C P+GS C G C+C+PG
Sbjct: 539 LKCIYNTAGVYCDQCKAGYFGDPLAPNPADKCRACNCSPMGSEPGECRG-DGSCVCKPGF 597
Query: 148 TGTRCE 153
G C+
Sbjct: 598 GGLNCD 603
Score = 210 (79.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 53/150 (35%), Positives = 70/150 (46%)
Query: 55 GDALALPKGDC----EPCQCYIPGTLETETFTPVCDQLTG---QC-SCKPHVVGTNCDQC 106
G AL LP E C C G F + TG +C +C + G +C++C
Sbjct: 11 GVALLLPAAQATSRREVCDCN--GKSRQCVFDQELHRQTGSGFRCLNCNDNTAGVHCERC 68
Query: 107 EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDG 166
G Y + C C+C GSL+ CD +GQC C+PGVTG RC+ CQP + + G
Sbjct: 69 REGFYRHRDRDRCLPCNCHSKGSLSAGCDN-SGQCRCKPGVTGQRCDRCQPGFHMLTDAG 127
Query: 167 C--------KPCMCDPIGSNSLQCDPSGQC 188
C C CDP G + CD SG+C
Sbjct: 128 CTRDQGQLDSKCDCDPAGISG-PCD-SGRC 155
Score = 206 (77.6 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 57/175 (32%), Positives = 79/175 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQL 88
TGDC N +C C G++ D P+ C+PC C+ ++ ET VC+
Sbjct: 428 TGDCYSGDENPD-IECADCPIGFYNDPHD-PRS-CKPCPCHNGFSCSVMPETEEVVCN-- 482
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGE-G----CKSCDC----DPVGSLNRTCDPITG 139
+C P V G C+ C G + GE G C+ C C DP S N CD +TG
Sbjct: 483 ----NCPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPNASGN--CDQLTG 536
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
+CL C G C+ C+ ++G L D C+ C C P+GS +C G C
Sbjct: 537 RCLKCIYNTAGVYCDQCKAGYFGDPLAPNPADKCRACNCSPMGSEPGECRGDGSC 591
Score = 187 (70.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 59/187 (31%), Positives = 74/187 (39%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
+C+ G G C C GY D+ L P G C PC C G CD TG C
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGACVPCNCQGGGA---------CDPDTGDC 431
Query: 93 SCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR---PGVT 148
C C +G YN CK C C + + P T + +C PGVT
Sbjct: 432 YSGDENPDIECADCPIGFYNDPHDPRSCKPCPCH--NGFSCSVMPETEEVVCNNCPPGVT 489
Query: 149 GTRCELCQPNHYG--FSLDG----CKPCMC----DPIGSNSLQCDP-SGQCPGVFMNRAE 197
G RCELC +G F G C+ C C DP S + CD +G+C N A
Sbjct: 490 GARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPNASGN--CDQLTGRCLKCIYNTAG 547
Query: 198 MSSDDVR 204
+ D +
Sbjct: 548 VYCDQCK 554
Score = 169 (64.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 37/75 (49%), Positives = 39/75 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CLKCIYNT G CD C GYFGD LA P C C C G+ E C +
Sbjct: 535 TGRCLKCIYNTAGVYCDQCKAGYFGDPLAPNPADKCRACNCSPMGSEPGE-----C-RGD 588
Query: 90 GQCSCKPHVVGTNCD 104
G C CKP G NCD
Sbjct: 589 GSCVCKPGFGGLNCD 603
>UNIPROTKB|Q16363 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0031012 "extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0030155
GO:GO:0070062 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:foxm1pathway Pfam:PF02210 GO:GO:0045995
GO:GO:0005201 eggNOG:NOG247347 GO:GO:0005606 EMBL:S78569
EMBL:X91171 EMBL:X70904 EMBL:AB210027 EMBL:BT006690 EMBL:Z99289
EMBL:AL590106 EMBL:BC004241 EMBL:Y14240 EMBL:X76939 IPI:IPI00024406
IPI:IPI00329482 IPI:IPI00735310 PIR:S68960 RefSeq:NP_001098676.2
RefSeq:NP_001098677.2 RefSeq:NP_001098678.1 RefSeq:NP_001098679.1
RefSeq:NP_002281.3 UniGene:Hs.654572 ProteinModelPortal:Q16363
SMR:Q16363 IntAct:Q16363 MINT:MINT-1200879 STRING:Q16363
PhosphoSite:Q16363 DMDM:292495093 PaxDb:Q16363 PRIDE:Q16363
DNASU:3910 Ensembl:ENST00000230538 Ensembl:ENST00000368638
Ensembl:ENST00000389463 Ensembl:ENST00000424408
Ensembl:ENST00000453937 Ensembl:ENST00000455073
Ensembl:ENST00000522006 Ensembl:ENST00000578470
Ensembl:ENST00000584877 Ensembl:ENST00000584945 GeneID:3910
KEGG:hsa:3910 UCSC:uc003pvt.2 UCSC:uc003pvu.2 UCSC:uc010kdz.1
CTD:3910 GeneCards:GC06M112475 HGNC:HGNC:6484 HPA:HPA015693
MIM:600133 neXtProt:NX_Q16363 PharmGKB:PA30273 HOVERGEN:HBG052299
InParanoid:Q16363 KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB
PhylomeDB:Q16363 ChiTaRS:LAMA4 GenomeRNAi:3910 NextBio:15351
ArrayExpress:Q16363 Bgee:Q16363 CleanEx:HS_LAMA4
Genevestigator:Q16363 GermOnline:ENSG00000112769 Uniprot:Q16363
Length = 1823
Score = 281 (104.0 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 63/184 (34%), Positives = 87/184 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C NT G C+ CL GY GD++ C+PC C +P F C + G
Sbjct: 95 SGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCPLP---HLANFAESCYRKNG 151
Query: 91 --QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITGQCL 142
+C C + G NC++C G+Y ++ G CK CDC DP + CD +TGQC
Sbjct: 152 AVRCICNENYAGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDP-NLIFEDCDEVTGQCR 210
Query: 143 -CRPGVTGTRCELCQPNHYGFS--LDGCKPCMCD--PIGSNSLQCDPSGQCPGVFMNRAE 197
C TG +CE C P +YG + C C C P S + +C G P M+
Sbjct: 211 NCLRNTTGFKCERCAPGYYGDARIAKNCAVCNCGGGPCDSVTGECLEEGFEPPTGMDCPT 270
Query: 198 MSSD 201
+S D
Sbjct: 271 ISCD 274
Score = 154 (59.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 49/166 (29%), Positives = 71/166 (42%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTN 102
P + C G+F L+ G+C PC C G E C +G C C+ + G +
Sbjct: 62 PAAEKCNAGFF-HTLS---GECVPCDCN--GN-SNE-----CLDGSGYCVHCQRNTTGEH 109
Query: 103 CDQCEVGHY-NIISG--EGCKSCDCD-P-VGSLNRTCDPITG--QCLCRPGVTGTRCELC 155
C++C G+ + I G + C+ C C P + + +C G +C+C G CE C
Sbjct: 110 CEKCLDGYIGDSIRGAPQFCQPCPCPLPHLANFAESCYRKNGAVRCICNENYAGPNCERC 169
Query: 156 QPNHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQCPGVFMN 194
P +YG L CK C C +L CD +GQC N
Sbjct: 170 APGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRN 215
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 16 CVG--PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G P+ I + TG C C+ NT G +C+ C PGY+GDA + K +C C C
Sbjct: 189 CSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDA-RIAK-NCAVCNC--- 243
Query: 74 GTLETETFTPVCDQLTGQC 92
G P CD +TG+C
Sbjct: 244 GG------GP-CDSVTGEC 255
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 261 (96.9 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 60/148 (40%), Positives = 67/148 (45%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG CL C T PQCD C F P CE C C GT T TP CD
Sbjct: 1226 TTGRCL-CPPLTVRPQCDVCEVHSFSFH---PLAGCEGCNCSRTGT--DGTTTPECDGDH 1279
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
GQC C+P + G CD+C G Y C C C G+ CDP TG CLC+ V G
Sbjct: 1280 GQCRCRPRITGRQCDRCAPGFYRFPE---CLPCHCSRDGTEPGVCDPGTGACLCKENVQG 1336
Query: 150 TRCELCQPNHYGFSLD-----GCKPCMC 172
T C +C+ F LD GC C C
Sbjct: 1337 TECNMCREG--SFYLDPANPKGCTSCFC 1362
Score = 252 (93.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 60/179 (33%), Positives = 79/179 (44%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P+ G C + G QC C G++G P C+PC C
Sbjct: 1168 LPCECHPAGATGHPCSPEGGQCPCRPHVIGRQCTRCQTGFYG----FPH--CKPCSC--- 1218
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
G +C++ TG+C C P V CD CEV ++ GC+ C+C G+ T
Sbjct: 1219 GRR-------LCEETTGRCLCPPLTVRPQCDVCEVHSFSFHPLAGCEGCNCSRTGTDGTT 1271
Query: 134 ---CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CD GQC CRP +TG +C+ C P Y F C PC C G+ CDP +G C
Sbjct: 1272 TPECDGDHGQCRCRPRITGRQCDRCAPGFYRFP--ECLPCHCSRDGTEPGVCDPGTGAC 1328
Score = 244 (91.0 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 51/149 (34%), Positives = 72/149 (48%)
Query: 16 CVGPPS--DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G + D +V + G C +C + P C C P Y+ A P G C C+C++
Sbjct: 483 CQGSSNVCDPAGTVDSSLGHC-QCKLHVESPSCSICKPLYWNLAKENPDG-CSECRCHVA 540
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLN 131
GT+ C QL G C CK HV G +CD CE G++ + GC+ C CD G++
Sbjct: 541 GTMSG---IGECGQLDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGAVT 597
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHY 160
C +G C CR V G C+ + N+Y
Sbjct: 598 PVCSGRSGVCQCREHVVGKACQRPENNYY 626
Score = 229 (85.7 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 49/146 (33%), Positives = 69/146 (47%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C GG QCD C PG++ + C+ CQC G+ +T P C +TGQC C+P
Sbjct: 415 CRPGVGGAQCDACRPGFYSFPI------CQACQCSALGSYQT----P-CSPVTGQCECQP 463
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQ 156
+ G CD+C G + +G + CDP G T D G C C+ V C +C+
Sbjct: 464 GITGQRCDRCLSGASDFPHCQGSSNV-CDPAG----TVDSSLGHCQCKLHVESPSCSICK 518
Query: 157 PNHYGFSL---DGCKPCMCDPIGSNS 179
P ++ + DGC C C G+ S
Sbjct: 519 PLYWNLAKENPDGCSECRCHVAGTMS 544
Score = 227 (85.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 64/198 (32%), Positives = 88/198 (44%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALA-----LP----------KGDC-EPCQCYIPG 74
+G C C N G C+ C GY+ + LP GD + C C + G
Sbjct: 343 SGRCT-CRPNFRGDHCEECAAGYYHFPVCSRIPILPISTPSPEDPVAGDIIKGCDCNLEG 401
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
L +CD G+C C+P V G CD C G Y+ C++C C +GS C
Sbjct: 402 VLPE-----ICDA-QGRCLCRPGVGGAQCDACRPGFYSFPI---CQACQCSALGSYQTPC 452
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS--NSL---QC-----DP 184
P+TGQC C+PG+TG RC+ C F +CDP G+ +SL QC P
Sbjct: 453 SPVTGQCECQPGITGQRCDRCLSGASDFPHCQGSSNVCDPAGTVDSSLGHCQCKLHVESP 512
Query: 185 SGQ-CPGVFMNRAEMSSD 201
S C ++ N A+ + D
Sbjct: 513 SCSICKPLYWNLAKENPD 530
Score = 224 (83.9 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 52/154 (33%), Positives = 74/154 (48%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
G C C PGY+ + L G C PC C + + +C + + + + G +
Sbjct: 1566 GDSCQGCSPGYYRENKGLYTGWCVPCNCNGHSN-RCQDGSGICIECSSGMTIRG---GEH 1621
Query: 103 CDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQ---CLCRPGVTGTRCELCQPN 158
C++C+ G Y N I G C+ C C S C +TG+ C C+PG TGTRCE C P
Sbjct: 1622 CERCKEGSYWNTIHGS-CRVCPCPHSDSFATGC-VVTGENVKCSCKPGYTGTRCERCAPG 1679
Query: 159 HYGF--SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
++G G C+PC C+ G CDP +G C
Sbjct: 1680 YFGNPQKFGGSCQPCNCNSNGQLG-SCDPLNGDC 1712
Score = 204 (76.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 53/176 (30%), Positives = 78/176 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C +NT G C+ C GY+ G + P G C PC C+ P E C+Q
Sbjct: 291 GVCINCQHNTAGVNCEKCAKGYYRPYGIPVHAPDG-CIPCSCH-PEHAED------CEQG 342
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ----CLCR 144
+G+C+C+P+ G +C++C G+Y+ C P+ + + DP+ G C C
Sbjct: 343 SGRCTCRPNFRGDHCEECAAGYYHF---PVCSRIPILPISTPSPE-DPVAGDIIKGCDCN 398
Query: 145 -PGVTGTRCE-----LCQPNHYGFSLDGCKP----------CMCDPIGSNSLQCDP 184
GV C+ LC+P G D C+P C C +GS C P
Sbjct: 399 LEGVLPEICDAQGRCLCRPGVGGAQCDACRPGFYSFPICQACQCSALGSYQTPCSP 454
Score = 182 (69.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 48/166 (28%), Positives = 70/166 (42%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C G +CD CL G A P C GT+ D G
Sbjct: 456 TGQC-ECQPGITGQRCDRCLSG----ASDFPHCQGSSNVCDPAGTV---------DSSLG 501
Query: 91 QCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
C CK HV +C C+ ++N+ + +GC C C G+++ C + G C C+
Sbjct: 502 HCQCKLHVESPSCSICKPLYWNLAKENPDGCSECRCHVAGTMSGIGECGQLDGDCHCKSH 561
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDP-SGQC 188
V G C+ C+ ++ GC+ C CD G+ + C SG C
Sbjct: 562 VGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGAVTPVCSGRSGVC 607
Score = 174 (66.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/136 (30%), Positives = 67/136 (49%)
Query: 31 TGDCLKCIYNT---GGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
+G C++C GG C+ C G + + + G C C C P +++F C
Sbjct: 1604 SGICIECSSGMTIRGGEHCERCKEGSYWNTI---HGSCRVCPC--P---HSDSFATGC-V 1654
Query: 88 LTGQ---CSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCL 142
+TG+ CSCKP GT C++C G++ G C+ C+C+ G L +CDP+ G C+
Sbjct: 1655 VTGENVKCSCKPGYTGTRCERCAPGYFGNPQKFGGSCQPCNCNSNGQLG-SCDPLNGDCI 1713
Query: 143 CR-PGVTGT--RCELC 155
+ P +G C+ C
Sbjct: 1714 NQEPKDSGPGEECDDC 1729
Score = 156 (60.0 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 27/56 (48%), Positives = 30/56 (53%)
Query: 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMC 172
EG C+C P G+ C P GQC CRP V G +C CQ YGF CKPC C
Sbjct: 1165 EGALPCECHPAGATGHPCSPEGGQCPCRPHVIGRQCTRCQTGFYGFP--HCKPCSC 1218
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/98 (34%), Positives = 44/98 (44%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+C P SD + TG+ +KC G G +C+ C PGYFG+ G C+PC C
Sbjct: 1640 VCPCPHSDSFATGCVVTGENVKCSCKPGYTGTRCERCAPGYFGNPQKFG-GSCQPCNCNS 1698
Query: 73 PGTLETETFTPVCDQLTGQC---SCKPHVVGTNCDQCE 107
G L + CD L G C K G CD C+
Sbjct: 1699 NGQLGS------CDPLNGDCINQEPKDSGPGEECDDCD 1730
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 35/109 (32%), Positives = 50/109 (45%)
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EG-CKSCDCDPVGSLNRTCDPITGQCL- 142
Q C+C P G +C C G+Y G G C C+C+ G NR C +G C+
Sbjct: 1553 QSVEMCACPPDYTGDSCQGCSPGYYRENKGLYTGWCVPCNCN--GHSNR-CQDGSGICIE 1609
Query: 143 CRPGVT---GTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSGQ 187
C G+T G CE C+ Y ++ G C+ C C S + C +G+
Sbjct: 1610 CSSGMTIRGGEHCERCKEGSYWNTIHGSCRVCPCPHSDSFATGCVVTGE 1658
Score = 116 (45.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 43/150 (28%), Positives = 63/150 (42%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQC-------YIPGTLETETFTPV 84
+C +NT G CD C GY + A +CE C C Y +E + +
Sbjct: 223 ECQHNTCGDTCDRCCMGYNQRRWRPATGKQSNECEACNCHGHSTDCYYDPDVERQQASLN 282
Query: 85 CDQLT---GQC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
L G C +C+ + G NC++C G+Y G + P G + +C P +
Sbjct: 283 IQGLYAGGGVCINCQHNTAGVNCEKCAKGYYRPY-GIPVHA----PDGCIPCSCHPEHAE 337
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPC 170
C G +G RC C+PN G D C+ C
Sbjct: 338 D-CEQG-SG-RCT-CRPNFRG---DHCEEC 360
Score = 71 (30.1 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 165 DGCKPCMCDPIGSNSLQCDPSG-QCP 189
+G PC C P G+ C P G QCP
Sbjct: 1165 EGALPCECHPAGATGHPCSPEGGQCP 1190
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 271 (100.5 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 51/123 (41%), Positives = 72/123 (58%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDP 126
C C + G+L C+Q TGQC C+P G +C+ C+ G Y N SG C+ CDC P
Sbjct: 204 CNCSVVGSLNVNR----CNQTTGQCECRPGYQGLHCETCKEGFYLNYTSGL-CQPCDCSP 258
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
G+L+ C+ +G+C C+ GV G+ C+ CQ +YGFS +GC PC C+ + S CD +
Sbjct: 259 HGALSIPCNS-SGKCQCKVGVIGSICDRCQDGYYGFSKNGCLPCQCN---NRSASCDALT 314
Query: 186 GQC 188
G C
Sbjct: 315 GAC 317
Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 53/146 (36%), Positives = 74/146 (50%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C +C G C+TC G++ L G C+PC C G L P C+ +
Sbjct: 220 TTGQC-ECRPGYQGLHCETCKEGFY---LNYTSGLCQPCDCSPHGALSI----P-CNS-S 269
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVT 148
G+C CK V+G+ CD+C+ G+Y S GC C C+ + + +CD +TG CL C+
Sbjct: 270 GKCQCKVGVIGSICDRCQDGYYGF-SKNGCLPCQCN---NRSASCDALTGACLNCQENSK 325
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDP 174
G CE C+ Y S D K C+ P
Sbjct: 326 GNHCEECKEGFYQ-SPDATKECLRCP 350
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 55/184 (29%), Positives = 79/184 (42%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT 75
C P L ++G C +C G CD C GY+G K C PCQC
Sbjct: 254 CDCSPHGALSIPCNSSGKC-QCKVGVIGSICDRCQDGYYG----FSKNGCLPCQC----- 303
Query: 76 LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPV---GSL 130
+ CD LTG C +C+ + G +C++C+ G Y + C C C V GS
Sbjct: 304 ---NNRSASCDALTGACLNCQENSKGNHCEECKEGFYQSPDATKECLRCPCSAVTSTGSC 360
Query: 131 NRTCDPITGQC-LCRPGVTGTRCELCQPNHYGFSLDGCKPCMC----DPIGSNSLQCDP- 184
+ + +C C+ G G C C+ +Y F C+ C C DP+ + + C P
Sbjct: 361 SIKSSELEPECDQCKDGYIGPNCNKCENGYYNFD-SICRKCQCHGHVDPVKTPKI-CKPE 418
Query: 185 SGQC 188
SG+C
Sbjct: 419 SGEC 422
Score = 189 (71.6 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 49/146 (33%), Positives = 69/146 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY-IPGT----LETETFTPVC 85
TG CL C N+ G C+ C G++ A +C C C + T +++ P C
Sbjct: 314 TGACLNCQENSKGNHCEECKEGFYQSPDATK--ECLRCPCSAVTSTGSCSIKSSELEPEC 371
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC----DPVGSLNRTCDPITGQC 141
DQ CK +G NC++CE G+YN S C+ C C DPV + + C P +G+C
Sbjct: 372 DQ------CKDGYIGPNCNKCENGYYNFDSI--CRKCQCHGHVDPVKT-PKICKPESGEC 422
Query: 142 L-CRPGVTGTRCELCQPNHYGFSLDG 166
+ C TG CE C Y L+G
Sbjct: 423 INCLHNTTGFWCENCLEG-YVHDLEG 447
>UNIPROTKB|F1LRH4 [details] [associations]
symbol:Lamc2 "Protein Lamc2" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0008201 "heparin binding" evidence=IEA] RGD:621053
GO:GO:0008201 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 GeneTree:ENSGT00690000102103 GO:GO:0005610 CTD:3918
KO:K06246 OMA:DRCLPCN IPI:IPI00393413 RefSeq:NP_001094110.1
UniGene:Rn.9278 ProteinModelPortal:F1LRH4
Ensembl:ENSRNOT00000036947 GeneID:192362 KEGG:rno:192362
NextBio:623057 ArrayExpress:F1LRH4 Uniprot:F1LRH4
Length = 1192
Score = 275 (101.9 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 55/150 (36%), Positives = 79/150 (52%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
CL C NT G C+ C G++ + C PC C+ G+L CD +GQC
Sbjct: 53 CLNCNDNTAGVHCERCREGFYRQR---DRDRCLPCNCHSKGSLGAG-----CDN-SGQCR 103
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGC--------KSCDCDPVGSLNRTCDPITGQCLCRP 145
CKP VVG CD+C+ G +++++ GC CDCDP G ++ CD +G+C+C+P
Sbjct: 104 CKPGVVGQRCDRCQPG-FHMLTDAGCTRDQRQLDSKCDCDPAG-ISGPCD--SGRCVCKP 159
Query: 146 GVTGTRCELCQPNHYGFSL---DGCKPCMC 172
VTG RC+ C+ +Y +GC C C
Sbjct: 160 AVTGERCDRCRAGYYHLDRANPEGCTQCFC 189
Score = 213 (80.0 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ-CYIPGTLETETFTPVCDQLTGQC 92
C C G +C+ C G+FGD +G PCQ C ++ + CDQLTG+C
Sbjct: 481 CNNCPPGVTGARCELCADGFFGDPFG-ERGPVRPCQRCQCNNNVDPSA-SGNCDQLTGRC 538
Query: 93 -SCKPHVVGTNCDQCEVGHY-NIIS---GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
C + G CDQC+ G++ + ++ + C++C+C+PVGS C G C+C+PG
Sbjct: 539 LKCIYNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPVGSEPGECRS-DGSCVCKPGF 597
Query: 148 TGTRC 152
G C
Sbjct: 598 GGLNC 602
Score = 210 (79.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 57/175 (32%), Positives = 80/175 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQL 88
TGDC N +C C G++ D P+ C+PC C+ ++ ET VC+
Sbjct: 428 TGDCYSGDENPD-IECADCPIGFYNDPHD-PRS-CKPCPCHNGFSCSVMPETEEVVCN-- 482
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGE-G----CKSCDC----DPVGSLNRTCDPITG 139
+C P V G C+ C G + GE G C+ C C DP S N CD +TG
Sbjct: 483 ----NCPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPSASGN--CDQLTG 536
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
+CL C G C+ C+ ++G L D C+ C C+P+GS +C G C
Sbjct: 537 RCLKCIYNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPVGSEPGECRSDGSC 591
Score = 204 (76.9 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 52/150 (34%), Positives = 68/150 (45%)
Query: 55 GDALALPKGDC----EPCQCYIPGTLETETFTPVCDQLTG---QC-SCKPHVVGTNCDQC 106
G AL LP E C C G F + TG +C +C + G +C++C
Sbjct: 11 GVALLLPAAQATSRREVCDCN--GKSRQCVFDQELHRQTGNGFRCLNCNDNTAGVHCERC 68
Query: 107 EVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDG 166
G Y + C C+C GSL CD +GQC C+PGV G RC+ CQP + + G
Sbjct: 69 REGFYRQRDRDRCLPCNCHSKGSLGAGCDN-SGQCRCKPGVVGQRCDRCQPGFHMLTDAG 127
Query: 167 C--------KPCMCDPIGSNSLQCDPSGQC 188
C C CDP G + CD SG+C
Sbjct: 128 CTRDQRQLDSKCDCDPAGISG-PCD-SGRC 155
Score = 189 (71.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 59/187 (31%), Positives = 74/187 (39%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
+C+ G G C C GY D+ L P G C PC C G CD TG C
Sbjct: 381 RCVCPAGYKGQFCQECASGYKRDSARLGPFGTCVPCNCQGGGA---------CDPDTGDC 431
Query: 93 SCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR---PGVT 148
C C +G YN CK C C + + P T + +C PGVT
Sbjct: 432 YSGDENPDIECADCPIGFYNDPHDPRSCKPCPCH--NGFSCSVMPETEEVVCNNCPPGVT 489
Query: 149 GTRCELCQPNHYG--FSLDG----CKPCMC----DPIGSNSLQCDP-SGQCPGVFMNRAE 197
G RCELC +G F G C+ C C DP S + CD +G+C N A
Sbjct: 490 GARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPSASGN--CDQLTGRCLKCIYNTAG 547
Query: 198 MSSDDVR 204
+ D +
Sbjct: 548 IYCDQCK 554
Score = 164 (62.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 36/74 (48%), Positives = 38/74 (51%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CLKCIYNT G CD C GYFGD LA P C C C G+ E C +
Sbjct: 535 TGRCLKCIYNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPVGSEPGE-----C-RSD 588
Query: 90 GQCSCKPHVVGTNC 103
G C CKP G NC
Sbjct: 589 GSCVCKPGFGGLNC 602
Score = 138 (53.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 31/98 (31%), Positives = 46/98 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETET--FTPVCDQL 88
+G C +C G +CD C PG+ L C Q + + + + CD
Sbjct: 99 SGQC-RCKPGVVGQRCDRCQPGFH----MLTDAGCTRDQRQLDSKCDCDPAGISGPCD-- 151
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDC 124
+G+C CKP V G CD+C G+Y++ + EGC C C
Sbjct: 152 SGRCVCKPAVTGERCDRCRAGYYHLDRANPEGCTQCFC 189
Score = 64 (27.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFS-----LDGCKPCMCDPIGSNSLQCDP-SGQC 188
P +C+C G G C+ C + S C PC C G+ CDP +G C
Sbjct: 377 PWVERCVCPAGYKGQFCQECASGYKRDSARLGPFGTCVPCNCQGGGA----CDPDTGDC 431
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 279 (103.3 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 60/158 (37%), Positives = 76/158 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C T PQC+ C F P CE C C GT+E P CD+ +G
Sbjct: 1323 TGQC-RCPPRTVRPQCEVCETHSFSFH---PMAGCEGCNCSRRGTIEAAM--PECDRDSG 1376
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP + G CD+C G Y C C+C+ G+ CDP TG CLC+ V GT
Sbjct: 1377 QCRCKPRITGRQCDRCASGFYRFPE---CVPCNCNRDGTEPGVCDPGTGACLCKENVEGT 1433
Query: 151 RCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQCDPS 185
C +C+ + +L GC C C G N+ QC S
Sbjct: 1434 ECNVCREGSFHLDPANLKGCTSCFC--FGVNN-QCHSS 1468
Score = 254 (94.5 bits), Expect = 8.0e-20, P = 8.0e-20
Identities = 53/156 (33%), Positives = 76/156 (48%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C N G QC C G++G P+ C+PC C G +C+++TGQC C P
Sbjct: 1287 CQPNVIGRQCTRCATGHYG----FPR--CKPCSC---GRR-------LCEEMTGQCRCPP 1330
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT---CDPITGQCLCRPGVTGTRCE 153
V C+ CE ++ GC+ C+C G++ CD +GQC C+P +TG +C+
Sbjct: 1331 RTVRPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKPRITGRQCD 1390
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C Y F C PC C+ G+ CDP +G C
Sbjct: 1391 RCASGFYRFP--ECVPCNCNRDGTEPGVCDPGTGAC 1424
Score = 237 (88.5 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 59/165 (35%), Positives = 74/165 (44%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALP-------------KGDCEPCQCYIPGT 75
+G C C N G C+ C GY F L +P GD + C C + G
Sbjct: 440 SGRC-HCKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGDIKGCDCNLEGV 498
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L +CD G+C C+P V G CD C G Y+ C++C C +GS C
Sbjct: 499 LPE-----ICDA-HGRCLCRPGVEGPRCDTCRSGFYSFPI---CQACWCSALGSYQMPCS 549
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS-NS 179
+TGQC CRPGVTG RC+ C Y F CDP G+ NS
Sbjct: 550 SVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACDPAGTINS 594
Score = 231 (86.4 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 51/154 (33%), Positives = 73/154 (47%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGT 101
G C C PGY+ D L G C PC C + C +G C +C+ + G
Sbjct: 1662 GDSCQGCSPGYYRDHKGLYTGRCVPCNC--------NGHSNQCQDGSGICVNCQHNTAGE 1713
Query: 102 NCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPN 158
+C++C+ G+Y N + G C++C C S C G +C C+ G TGT+CE C P
Sbjct: 1714 HCERCQEGYYGNAVHGS-CRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPG 1772
Query: 159 HYGF--SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
++G G C+PC C+ G C P +G C
Sbjct: 1773 YFGNPQKFGGSCQPCSCNSNGQLG-SCHPLTGDC 1805
Score = 230 (86.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 57/183 (31%), Positives = 80/183 (43%)
Query: 12 DILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
DI C +L + G CL C GP+CDTC G++ + C+ C C
Sbjct: 487 DIKGCDCNLEGVLPEICDAHGRCL-CRPGVEGPRCDTCRSGFYSFPI------CQACWCS 539
Query: 72 IPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLN 131
G+ + P C +TGQC C+P V G CD+C G Y+ +G S CDP G++N
Sbjct: 540 ALGSYQM----P-CSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSA-CDPAGTIN 593
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIG--SNSLQC-DPS 185
G C C+ V G C C+ ++ + GC C C G S + +C
Sbjct: 594 SNL----GYCQCKLHVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGD 649
Query: 186 GQC 188
G C
Sbjct: 650 GDC 652
Score = 225 (84.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 51/149 (34%), Positives = 70/149 (46%)
Query: 16 CVGPPS--DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G S D ++ G C +C + GP C C Y+ P G C C+C+
Sbjct: 579 CQGSSSACDPAGTINSNLGYC-QCKLHVEGPTCSRCKLLYWNLDKENPSG-CSECKCHKA 636
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLN 131
GT+ T C Q G C CK HV G +CD CE G++ + GC+ C CD G+L+
Sbjct: 637 GTVSG---TGECRQGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALS 693
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHY 160
C +G C CR V G C+ + N+Y
Sbjct: 694 SMCSGPSGVCQCREHVVGKVCQRPENNYY 722
Score = 220 (82.5 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 45/127 (35%), Positives = 62/127 (48%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC+C+ G P C GQC C+P+V+G C +C GHY CK C C
Sbjct: 1265 PCECHPTGATG-----PHCSPEGGQCPCQPNVIGRQCTRCATGHYGF---PRCKPCSCG- 1315
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGSNSL---QC 182
R C+ +TGQC C P +CE+C+ + + F + GC+ C C G+ +C
Sbjct: 1316 ----RRLCEEMTGQCRCPPRTVRPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPEC 1371
Query: 183 D-PSGQC 188
D SGQC
Sbjct: 1372 DRDSGQC 1378
Score = 210 (79.0 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 57/180 (31%), Positives = 81/180 (45%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C +NT G C+ C GY+ G + P G C PC C + E C+Q
Sbjct: 388 GVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDG-CIPCSC------DPE-HADGCEQG 439
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ---CLCR- 144
+G+C CKP+ G NC++C +G+YN C PV + + DP+ G C C
Sbjct: 440 SGRCHCKPNFHGDNCEKCAIGYYNF---PFCLRIPIFPVSTPSSE-DPVAGDIKGCDCNL 495
Query: 145 PGVTGTRCE-----LCQPNHYG----------FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
GV C+ LC+P G +S C+ C C +GS + C +GQC
Sbjct: 496 EGVLPEICDAHGRCLCRPGVEGPRCDTCRSGFYSFPICQACWCSALGSYQMPCSSVTGQC 555
Score = 208 (78.3 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 51/169 (30%), Positives = 73/169 (43%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
+ TG C +C G +CD CL G A P C GT+ +
Sbjct: 549 SSVTGQC-ECRPGVTGQRCDRCLSG----AYDFPHCQGSSSACDPAGTINSNL------- 596
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRT--CDPITGQCLC 143
G C CK HV G C +C++ ++N+ + GC C C G+++ T C G C C
Sbjct: 597 --GYCQCKLHVEGPTCSRCKLLYWNLDKENPSGCSECKCHKAGTVSGTGECRQGDGDCHC 654
Query: 144 RPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCD-PSGQC 188
+ V G C+ C+ ++ GC+ C CD G+ S C PSG C
Sbjct: 655 KSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSGPSGVC 703
Score = 202 (76.2 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C GY+G+A+ G C C C P T +F C G
Sbjct: 1700 SGICVNCQHNTAGEHCERCQEGYYGNAV---HGSCRACPC--P---HTNSFATGCVVNGG 1751
Query: 91 --QCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+CSCK GT C++C G++ G C+ C C+ G L +C P+TG C+ +
Sbjct: 1752 DVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQLG-SCHPLTGDCINQEP 1810
Query: 147 VTGTRCELC 155
+ E C
Sbjct: 1811 KDSSPAEEC 1819
Score = 153 (58.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 29/72 (40%), Positives = 37/72 (51%)
Query: 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+G C+C P G+ C P GQC C+P V G +C C HYGF CKPC C G
Sbjct: 1261 KGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFPR--CKPCSC---G 1315
Query: 177 SNSLQCDPSGQC 188
+ + +GQC
Sbjct: 1316 RRLCE-EMTGQC 1326
Score = 147 (56.8 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 33/100 (33%), Positives = 48/100 (48%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISG--EG-CKSCDCDPVGSLNRTCDPITGQCL-CRPGV 147
C+C P G +C C G+Y G G C C+C+ G N+ C +G C+ C+
Sbjct: 1654 CACPPAYAGDSCQGCSPGYYRDHKGLYTGRCVPCNCN--GHSNQ-CQDGSGICVNCQHNT 1710
Query: 148 TGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
G CE CQ +YG ++ G C+ C C S + C +G
Sbjct: 1711 AGEHCERCQEGYYGNAVHGSCRACPCPHTNSFATGCVVNG 1750
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 43/150 (28%), Positives = 63/150 (42%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQC-------YIPGTLETETFTPV 84
+C ++T G CD C GY + A +CE C C Y +E + +
Sbjct: 320 ECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASNCYYDPDVERQQASLN 379
Query: 85 CDQLT---GQC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
+ G C +C+ + G NC+QC G+Y D P G + +CDP
Sbjct: 380 TQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYG----VPVDA-PDGCIPCSCDPEHAD 434
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPC 170
C G +G RC C+PN +G D C+ C
Sbjct: 435 G-CEQG-SG-RCH-CKPNFHG---DNCEKC 457
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 30/97 (30%), Positives = 40/97 (41%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C P ++ + G ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 1734 CPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSN 1792
Query: 74 GTLETETFTPVCDQLTGQC---SCKPHVVGTNCDQCE 107
G L + C LTG C K CD C+
Sbjct: 1793 GQLGS------CHPLTGDCINQEPKDSSPAEECDDCD 1823
Score = 72 (30.4 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 148 TGTR-CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG-QCP 189
T +R C+ + F G PC C P G+ C P G QCP
Sbjct: 1243 TASRFCKNSARSLVAFYHKGALPCECHPTGATGPHCSPEGGQCP 1286
Score = 49 (22.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 90 GQCSCKPHVVGTNCD------QCEVGHYNIISGEGCKSC 122
GQC C H N + +CE H+ GE C C
Sbjct: 297 GQCVCNGHAEVCNINNPEKLFRCECQHHTC--GETCDRC 333
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 277 (102.6 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 59/158 (37%), Positives = 79/158 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C C ++T GP+C+ C PGY+GDA DC+ C CY T D G
Sbjct: 1172 TGACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQAAHTCFLDT-DG 1230
Query: 91 Q--C-SCKPHVVGTNCDQCEVGHY-NIISGEGCK---------SCDCDPVGSLNRTCDPI 137
C +C P G +C++C G+Y N G+ C+ C+CDP GS++ CD
Sbjct: 1231 HPTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSSQCDA- 1289
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
GQC C+ V G C C+P+H+ S DGC PC C
Sbjct: 1290 AGQCQCKAQVEGLTCSHCRPHHFHLSASNPDGCLPCFC 1327
Score = 211 (79.3 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 52/152 (34%), Positives = 68/152 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQLT- 89
G CL C +NT GPQC+ C G+FGDA+ C PC C YI + F+ C T
Sbjct: 778 GHCLNCQHNTEGPQCNKCKAGFFGDAMKATATSCRPCPCPYIDAS---RRFSDTCFLDTD 834
Query: 90 GQ--C-SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRTCDPITGQ-CLC 143
GQ C +C P G C+ C G+ I G C+ + + V R +G+ C C
Sbjct: 835 GQATCDACAPGYTGRRCESCAPGYEGNPIQPGGKCRPVNQEIVRCDERGSMGTSGEACRC 894
Query: 144 RPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
+ V G C C + S DGC C C
Sbjct: 895 KNNVVGRLCNECADGSFHLSTRNPDGCLKCFC 926
Score = 186 (70.5 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 55/175 (31%), Positives = 77/175 (44%)
Query: 9 SVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC 68
S+ + L V P + A +C +C G C C PGY L G CE C
Sbjct: 1505 SISAVSLEVAQPGPSNRPRALEVEEC-RCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELC 1563
Query: 69 QCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-NIISG--EGCKSCDC 124
+C + +C TG CS C+ + G C+ C G+Y + +G E C+ C C
Sbjct: 1564 EC--------NGHSDLCHPETGACSQCQHNAAGEFCELCAPGYYGDATAGTPEDCQPCAC 1615
Query: 125 ---DPVGSLNRTCDPI-TG--QCL-CRPGVTGTRCELCQPNHYGF-SLDG--CKP 169
+P +RTC+ + G +C C PG TG CE C P + G S+ G C P
Sbjct: 1616 PLTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCGPGYVGNPSVQGGQCLP 1670
Score = 176 (67.0 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 64/202 (31%), Positives = 81/202 (40%)
Query: 10 VMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ 69
V I + V P + + A C C GP C C GY L G CE C
Sbjct: 1102 VSGISMDVAVPEETGQDPALEVEQC-SCPPGYRGPSCQDCDTGYTRTPSGLYLGTCERCS 1160
Query: 70 CYIPG-TLETETFT-PVCDQLT-G-QCS-CKPHVVGT-------NCDQCEVGHYNIISGE 117
C+ E ET C T G +C C+P G +C C + + +G+
Sbjct: 1161 CHGHSEACEPETGACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPC-YGDPAAGQ 1219
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDG--CK-----P- 169
+C D G + TCD C PG +G CE C P +YG G C+ P
Sbjct: 1220 AAHTCFLDTDG--HPTCDA------CSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPG 1271
Query: 170 ---CMCDPIGSNSLQCDPSGQC 188
C CDP GS S QCD +GQC
Sbjct: 1272 PIGCNCDPQGSVSSQCDAAGQC 1293
Score = 165 (63.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 50/172 (29%), Positives = 74/172 (43%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPK-GDCEPCQCYIPGTLETETFTPVCD 86
A + +C +C G C++C +F P G C C C G + CD
Sbjct: 725 AHSVEEC-RCPIGYSGLSCESC-DAHFTRVPGGPYLGTCSGCNCN--GHASS------CD 774
Query: 87 QLTGQC-SCKPHVVGTNCDQCEVGHYNII---SGEGCKSCDCDPVGSLNR---TCDPIT- 138
+ G C +C+ + G C++C+ G + + C+ C C + + R TC T
Sbjct: 775 PVYGHCLNCQHNTEGPQCNKCKAGFFGDAMKATATSCRPCPCPYIDASRRFSDTCFLDTD 834
Query: 139 GQ--C-LCRPGVTGTRCELCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDPSG 186
GQ C C PG TG RCE C P + G + G K C P+ ++CD G
Sbjct: 835 GQATCDACAPGYTGRRCESCAPGYEGNPIQPGGK---CRPVNQEIVRCDERG 883
Score = 156 (60.0 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 37/107 (34%), Positives = 50/107 (46%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE--G-CKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
+C C P +G +C C G+ SG G C+ C+C+ L C P TG C C+
Sbjct: 1529 ECRCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELCECNGHSDL---CHPETGACSQCQHN 1585
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC---DPIGSNSLQCDPSG 186
G CELC P +YG + G C+PC C +P S C+ G
Sbjct: 1586 AAGEFCELCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLG 1632
Score = 128 (50.1 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 36/117 (30%), Positives = 51/117 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ--CYIPGTLETE-----TFTPVCD 86
C C G C+ C PGY+G+ +G +PCQ +PG + + + CD
Sbjct: 1234 CDACSPGHSGRHCERCAPGYYGNP---SQG--QPCQRDSQVPGPIGCNCDPQGSVSSQCD 1288
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPITGQC 141
GQC CK V G C C H+++ + +GC C C +G IT QC
Sbjct: 1289 A-AGQCQCKAQVEGLTCSHCRPHHFHLSASNPDGCLPCFC--MG--------ITQQC 1334
Score = 69 (29.3 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC 70
GT+G+ +C N G C+ C G F + P G C C C
Sbjct: 886 GTSGEACRCKNNVVGRLCNECADGSFHLSTRNPDG-CLKCFC 926
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 276 (102.2 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 61/164 (37%), Positives = 80/164 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY-IPGT--------LETETF 81
TG C C ++T G C+ C PGY+GDA DC+PC CY P L+T+
Sbjct: 1172 TGACQSCQHHTEGASCEQCQPGYYGDAQRGTPQDCQPCPCYGAPAAGQAAHTCFLDTDGH 1231
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEGCK---------SCDCDPVGSLN 131
P CD SC P G +C++C G+Y N G+ C C CDP GS++
Sbjct: 1232 -PTCD------SCSPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHGSIS 1284
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
CD GQC C+ V G C C+P+H+ S +GC PC C
Sbjct: 1285 SQCDA-AGQCQCKAQVEGRSCSHCRPHHFHLSASNPEGCLPCFC 1327
Score = 225 (84.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 62/184 (33%), Positives = 77/184 (41%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC-YIPGTLETETFTPVCDQLT- 89
G CL C +NT GPQCD C PG+FGDA C PC C YI + F+ C T
Sbjct: 778 GHCLNCQHNTEGPQCDKCKPGFFGDATKATATACRPCPCPYIDAS---RRFSDTCFLDTD 834
Query: 90 GQ--C-SCKPHVVGTNCDQCEVGHYN--IISGEGCKSCD-----CDPVGSLNRTCDPITG 139
GQ C +C P G C+ C G+ I G C+ CD GSL + +
Sbjct: 835 GQATCDACAPGYTGRRCESCAPGYEGNPIQPGGKCRPTTQEIVRCDERGSLGTSGET--- 891
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQCDPSGQCPGVFMNRA 196
C C+ V G C C + S DGC C C + S QC S + +
Sbjct: 892 -CRCKNNVVGRLCNECSDGSFHLSKQNPDGCLKCFCMGV---SRQCSSSSWSRAQVLGAS 947
Query: 197 EMSS 200
E S
Sbjct: 948 EQPS 951
Score = 193 (73.0 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 54/167 (32%), Positives = 76/167 (45%)
Query: 33 DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
+C +C G C C PGY L G CE C+C + +C TG C
Sbjct: 1529 EC-RCPPGYVGLSCQDCAPGYTRTGSGLYLGQCELCEC--------NGHSDLCHPETGAC 1579
Query: 93 S-CKPHVVGTNCDQCEVGHY-NIISG--EGCKSCDC---DPVGSLNRTCDPI-TG--QCL 142
S C+ + G C+ C G+Y + +G E C+ C C +P +RTC+ + G +C
Sbjct: 1580 SRCQHNTAGEFCELCATGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCT 1639
Query: 143 -CRPGVTGTRCELCQPNHYGF-SLDGCKPCMCDPIGSNSL--QCDPS 185
C PG TG CE C P + G ++ G + C P+ SL Q PS
Sbjct: 1640 ACEPGYTGQYCEQCAPGYEGDPNVQGGR---CQPLTKESLEVQIHPS 1683
Score = 181 (68.8 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 46/137 (33%), Positives = 67/137 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL-T 89
TG C +C +NT G C+ C GY+GDA A DC+PC C P T F+ C+ L
Sbjct: 1576 TGACSRCQHNTAGEFCELCATGYYGDATAGTPEDCQPCAC--PLTNPENMFSRTCESLGA 1633
Query: 90 G--QCS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVG--SLNRTCDPITGQCLCR 144
G +C+ C+P G C+QC G+ + +G + C P+ SL P + + +
Sbjct: 1634 GGYRCTACEPGYTGQYCEQCAPGYEGDPNVQGGR---CQPLTKESLEVQIHP-SRSVVPQ 1689
Query: 145 PGVTGTRCELC-QPNHY 160
G RC++ P HY
Sbjct: 1690 GGPHSLRCQVSGSPPHY 1706
Score = 175 (66.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 64/200 (32%), Positives = 77/200 (38%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
I + V P + + A C C GP C C GY L G CE C C+
Sbjct: 1105 ISMDVAVPENTGQDSAREVEQCT-CPPGYRGPSCQDCDTGYTRVPSGLYLGTCERCNCHG 1163
Query: 73 PG-TLETETFT-PVCDQLT--GQCS-CKPHVVGT-------NCDQCEVGHYNI-ISGEGC 119
T E ET C T C C+P G +C C Y +G+
Sbjct: 1164 HSETCEPETGACQSCQHHTEGASCEQCQPGYYGDAQRGTPQDCQPCPC--YGAPAAGQAA 1221
Query: 120 KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG-------FSLDGCKP--- 169
+C D G + TCD C PG +G CE C P +YG DG P
Sbjct: 1222 HTCFLDTDG--HPTCDS------CSPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVL 1273
Query: 170 -CMCDPIGSNSLQCDPSGQC 188
C CDP GS S QCD +GQC
Sbjct: 1274 GCGCDPHGSISSQCDAAGQC 1293
Score = 149 (57.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 37/107 (34%), Positives = 49/107 (45%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE--G-CKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
+C C P VG +C C G+ SG G C+ C+C+ L C P TG C C+
Sbjct: 1529 ECRCPPGYVGLSCQDCAPGYTRTGSGLYLGQCELCECNGHSDL---CHPETGACSRCQHN 1585
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC---DPIGSNSLQCDPSG 186
G CELC +YG + G C+PC C +P S C+ G
Sbjct: 1586 TAGEFCELCATGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLG 1632
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE---G-CKSCDCDPVGSLNRTCDPITGQCL-CRP 145
+C C G +C+ C+ H+ + G G C C+C+ S +CDP+ G CL C+
Sbjct: 730 ECRCPIGYSGLSCESCDA-HFTRVPGGPYLGTCSGCNCNGHAS---SCDPVYGHCLNCQH 785
Query: 146 GVTGTRCELCQPNHYG----FSLDGCKPCMCDPIGSN 178
G +C+ C+P +G + C+PC C I ++
Sbjct: 786 NTEGPQCDKCKPGFFGDATKATATACRPCPCPYIDAS 822
Score = 120 (47.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 36/117 (30%), Positives = 52/117 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGD-ALALP-KGDCE-P----CQCYIPGTLETETFTPVCD 86
C C G C+ C PGY+G+ + P D + P C C G++ ++ CD
Sbjct: 1234 CDSCSPGHSGRHCERCAPGYYGNPSQGQPCHRDGQVPEVLGCGCDPHGSISSQ-----CD 1288
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPITGQC 141
GQC CK V G +C C H+++ + EGC C C +G +T QC
Sbjct: 1289 A-AGQCQCKAQVEGRSCSHCRPHHFHLSASNPEGCLPCFC--MG--------VTQQC 1334
Score = 66 (28.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQC 70
GT+G+ +C N G C+ C G F + P G C C C
Sbjct: 886 GTSGETCRCKNNVVGRLCNECSDGSFHLSKQNPDG-CLKCFC 926
Score = 56 (24.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 140 QCLCRPGVTGTRCELCQPNHYG 161
+CLC PG +G RC+ Q YG
Sbjct: 3480 RCLCLPGFSGPRCQ--QGAGYG 3499
>UNIPROTKB|Q13753 [details] [associations]
symbol:LAMC2 "Laminin subunit gamma-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779 GO:GO:0005938
GO:GO:0048471 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 GO:GO:0005615 GO:GO:0008201
GO:GO:0007155 EMBL:CH471067 PROSITE:PS00022 Reactome:REACT_111155
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0031581 Orphanet:79402
InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052 SMART:SM00281
PROSITE:PS51115 MIM:226700 Orphanet:79404 GO:GO:0005610
GO:GO:0005607 EMBL:AL354953 EMBL:Z15008 EMBL:Z15009 EMBL:X73902
EMBL:U31201 EMBL:U31178 EMBL:U31179 EMBL:U31180 EMBL:U31181
EMBL:U31182 EMBL:U31183 EMBL:U31184 EMBL:U31186 EMBL:U31187
EMBL:U31188 EMBL:U31189 EMBL:U31190 EMBL:U31191 EMBL:U31192
EMBL:U31193 EMBL:U31194 EMBL:U31195 EMBL:U31196 EMBL:U31197
EMBL:U31198 EMBL:U31199 EMBL:U31200 EMBL:BC113378 IPI:IPI00015117
IPI:IPI00220572 PIR:A44018 RefSeq:NP_005553.2 RefSeq:NP_061486.2
UniGene:Hs.591484 ProteinModelPortal:Q13753 SMR:Q13753 DIP:DIP-190N
MINT:MINT-4053464 STRING:Q13753 Allergome:8331 PhosphoSite:Q13753
DMDM:90185107 PaxDb:Q13753 PeptideAtlas:Q13753 PRIDE:Q13753
Ensembl:ENST00000264144 Ensembl:ENST00000493293 GeneID:3918
KEGG:hsa:3918 UCSC:uc001gpz.4 UCSC:uc001gqa.2 CTD:3918
GeneCards:GC01P183155 HGNC:HGNC:6493 HPA:CAB004257 HPA:HPA024638
MIM:150292 neXtProt:NX_Q13753 PharmGKB:PA30281 eggNOG:NOG285700
HOVERGEN:HBG062127 InParanoid:Q13753 KO:K06246 OMA:DRCLPCN
OrthoDB:EOG4ZCT3N PhylomeDB:Q13753 ChiTaRS:LAMC2 GenomeRNAi:3918
NextBio:15391 PMAP-CutDB:Q13753 ArrayExpress:Q13753 Bgee:Q13753
CleanEx:HS_LAMC2 Genevestigator:Q13753 GermOnline:ENSG00000058085
Uniprot:Q13753
Length = 1193
Score = 266 (98.7 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 59/165 (35%), Positives = 83/165 (50%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
CL C NT G C+ C G++ + C PC C G+L CD +G+CS
Sbjct: 53 CLNCNDNTDGIHCEKCKNGFYRHR---ERDRCLPCNCNSKGSLSAR-----CDN-SGRCS 103
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGC--------KSCDCDPVGSLNRTCDPITGQCLCRP 145
CKP V G CD+C G +++++ GC CDCDP G + CD G+C+C+P
Sbjct: 104 CKPGVTGARCDRCLPG-FHMLTDAGCTQDQRLLDSKCDCDPAG-IAGPCD--AGRCVCKP 159
Query: 146 GVTGTRCELCQPNHY---GFSLDGCKPCMCDPIGSNSLQCDPSGQ 187
VTG RC+ C+ +Y G + +GC C C G +S C S +
Sbjct: 160 AVTGERCDRCRSGYYNLDGGNPEGCTQCFC--YG-HSASCRSSAE 201
Score = 221 (82.9 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 48/141 (34%), Positives = 71/141 (50%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALAL--PKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C C G +C+ C GYFGD P C+PCQC ++ + CD+LTG+
Sbjct: 481 CNNCPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCN--NNVDPSA-SGNCDRLTGR 537
Query: 92 C-SCKPHVVGTNCDQCEVGHY-NIIS---GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
C C + G CDQC+ G++ + ++ + C++C+C+P+GS C G C+C+PG
Sbjct: 538 CLKCIHNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPMGSEPVGCRS-DGTCVCKPG 596
Query: 147 VTGTRCELCQPNHYGFSLDGC 167
G CE H FS C
Sbjct: 597 FGGPNCE-----HGAFSCPAC 612
Score = 211 (79.3 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 57/175 (32%), Positives = 81/175 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQL 88
TGDC N +C C G++ D P+ C+PC C+ ++ ET VC+
Sbjct: 428 TGDCYSGDENPD-IECADCPIGFYNDPHD-PRS-CKPCPCHNGFSCSVMPETEEVVCN-- 482
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGE-G----CKSCDC----DPVGSLNRTCDPITG 139
+C P V G C+ C G++ GE G C+ C C DP S N CD +TG
Sbjct: 483 ----NCPPGVTGARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGN--CDRLTG 536
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL-----DGCKPCMCDPIGSNSLQCDPSGQC 188
+CL C G C+ C+ ++G L D C+ C C+P+GS + C G C
Sbjct: 537 RCLKCIHNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPMGSEPVGCRSDGTC 591
Score = 199 (75.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/187 (32%), Positives = 76/187 (40%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
+CI G G C C GY D+ L P G C PC C G CD TG C
Sbjct: 381 QCICPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCNCQGGGA---------CDPDTGDC 431
Query: 93 SCKPHVVGTNCDQCEVGHYNIISG-EGCKSCDCDPVGSLNRTCDPITGQCLCR---PGVT 148
C C +G YN CK C C + + P T + +C PGVT
Sbjct: 432 YSGDENPDIECADCPIGFYNDPHDPRSCKPCPCH--NGFSCSVMPETEEVVCNNCPPGVT 489
Query: 149 GTRCELCQPNHYG--FSLDG----CKPCMC----DPIGSNSLQCDP-SGQCPGVFMNRAE 197
G RCELC ++G F G C+PC C DP S + CD +G+C N A
Sbjct: 490 GARCELCADGYFGDPFGEHGPVRPCQPCQCNNNVDPSASGN--CDRLTGRCLKCIHNTAG 547
Query: 198 MSSDDVR 204
+ D +
Sbjct: 548 IYCDQCK 554
Score = 186 (70.5 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 45/135 (33%), Positives = 65/135 (48%)
Query: 66 EPCQCYIPGTLETETFTPVCDQLTG---QC-SCKPHVVGTNCDQCEVGHYNIISGEGCKS 121
E C C G F + TG +C +C + G +C++C+ G Y + C
Sbjct: 26 EVCDCN--GKSRQCIFDRELHRQTGNGFRCLNCNDNTDGIHCEKCKNGFYRHRERDRCLP 83
Query: 122 CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC--------KPCMCD 173
C+C+ GSL+ CD +G+C C+PGVTG RC+ C P + + GC C CD
Sbjct: 84 CNCNSKGSLSARCDN-SGRCSCKPGVTGARCDRCLPGFHMLTDAGCTQDQRLLDSKCDCD 142
Query: 174 PIGSNSLQCDPSGQC 188
P G CD +G+C
Sbjct: 143 PAGIAG-PCD-AGRC 155
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 35/75 (46%), Positives = 39/75 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CLKCI+NT G CD C GYFGD LA P C C C G+ PV +
Sbjct: 535 TGRCLKCIHNTAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPMGS------EPVGCRSD 588
Query: 90 GQCSCKPHVVGTNCD 104
G C CKP G NC+
Sbjct: 589 GTCVCKPGFGGPNCE 603
Score = 149 (57.5 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 35/105 (33%), Positives = 46/105 (43%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETET--F 81
L + +G C C G +CD CLPG+ L C Q + + +
Sbjct: 92 LSARCDNSGRC-SCKPGVTGARCDRCLPGFH----MLTDAGCTQDQRLLDSKCDCDPAGI 146
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDC 124
CD G+C CKP V G CD+C G+YN+ G EGC C C
Sbjct: 147 AGPCD--AGRCVCKPAVTGERCDRCRSGYYNLDGGNPEGCTQCFC 189
Score = 115 (45.5 bits), Expect = 0.00072, P = 0.00072
Identities = 39/134 (29%), Positives = 54/134 (40%)
Query: 65 CEPCQCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNIISGEGCKSCD 123
C+PC C+ + P +++ C+ C P V G C+ C G++ GE
Sbjct: 459 CKPCPCHNGFSCSV---MPETEEVV--CNNCPPGVTGARCELCADGYFGDPFGEHGPVRP 513
Query: 124 CDPVGSLNRTCDP-ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP-CMCDPIGSN--- 178
C P N DP +G C +TG RC C N G D CK DP+ N
Sbjct: 514 CQPC-QCNNNVDPSASGNC---DRLTG-RCLKCIHNTAGIYCDQCKAGYFGDPLAPNPAD 568
Query: 179 ---SLQCDPSGQCP 189
+ C+P G P
Sbjct: 569 KCRACNCNPMGSEP 582
Score = 66 (28.3 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 19/59 (32%), Positives = 24/59 (40%)
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFS-----LDGCKPCMCDPIGSNSLQCDP-SGQC 188
P QC+C G G C+ C + S C PC C G+ CDP +G C
Sbjct: 377 PWVEQCICPVGYKGQFCQDCASGYKRDSARLGPFGTCIPCNCQGGGA----CDPDTGDC 431
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 263 (97.6 bits), Expect = 8.3e-21, P = 8.3e-21
Identities = 58/158 (36%), Positives = 75/158 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C NT PQC+ C F P CE C C GT+E CD+ +G
Sbjct: 1227 TGKCL-CPPNTVRPQCEVCEMNSFNFH---PVAGCEVCNCSRKGTVEAAVSE--CDRDSG 1280
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP V G CD+C G Y+ C C C+ G+ CDP TG C+C+ V G
Sbjct: 1281 QCRCKPRVTGQQCDKCAPGFYHFPE---CVPCSCNRDGTEPGVCDPGTGACMCKENVEGP 1337
Query: 151 RCELCQPNHY---GFSLDGCKPCMCDPIGSNSLQCDPS 185
+C+ C+ + + +GC C C G N+ C S
Sbjct: 1338 QCQFCREGSFYLDSANPEGCTRCFC--FGVNT-DCRSS 1372
Score = 243 (90.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 58/162 (35%), Positives = 73/162 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALP-------------KGDCEPCQCYIPGT 75
+G C C N G C+TC GY F L +P G+ + C C + G
Sbjct: 343 SGRC-HCKPNFSGDFCETCADGYYNFPFCLRIPVFPDYTLNPEDPMAGNIKGCDCNLEGV 401
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L +CD G+C C+P V G CD C G Y+ C++C C GS CD
Sbjct: 402 LPE-----ICDD-RGRCLCRPGVEGPRCDSCRSGSYSFPI---CQACQCSTSGSYPVPCD 452
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS 177
P TGQC C PGVTG RC+ C Y F +CDP G+
Sbjct: 453 PETGQCECLPGVTGRRCDRCLSGAYDFPYCQGSSSVCDPAGT 494
Score = 242 (90.2 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/153 (32%), Positives = 71/153 (46%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGT 101
G C C PGY+ D + P G C PC C + C +G C +C+ + G
Sbjct: 1566 GDSCQGCRPGYYRDIKSFPAGRCVPCNC--------NGHSNRCQDGSGVCINCQHNTAGE 1617
Query: 102 NCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPNH 159
+C++C+ G+Y C+ C C S C G +C C+PG TG +CE C P +
Sbjct: 1618 HCERCQEGYYGSAIHGSCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGY 1677
Query: 160 YGF--SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
+G G C+PC C+ G CDP +G C
Sbjct: 1678 FGNPQKFGGSCQPCNCNSNGQFGT-CDPLTGDC 1709
Score = 241 (89.9 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 52/153 (33%), Positives = 73/153 (47%)
Query: 12 DILLCVGPPS--DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ 69
D C G S D ++ + G C +C + P C C P Y+ A P+G C CQ
Sbjct: 478 DFPYCQGSSSVCDPAGTMDSSLGYC-QCKLHVTSPTCSVCKPLYWDLAKENPRG-CSECQ 535
Query: 70 CYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPV 127
C+ GT+ C Q G CSCK HV G CD C G++++ GC+ C CD
Sbjct: 536 CHEAGTVSG---IGECGQEDGDCSCKAHVTGDACDTCADGYFSLEKSNYFGCQGCQCDIG 592
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
G+L C +G+C CR + G +C+ + N Y
Sbjct: 593 GALTTMCSGPSGECQCREHIEGKQCQRPESNCY 625
Score = 237 (88.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 46/128 (35%), Positives = 67/128 (52%)
Query: 65 CEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC 124
C+PC C G +C+++TG+C C P+ V C+ CE+ +N GC+ C+C
Sbjct: 1213 CKPCNC---GRR-------LCEEVTGKCLCPPNTVRPQCEVCEMNSFNFHPVAGCEVCNC 1262
Query: 125 DPVGSLNRT---CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQ 181
G++ CD +GQC C+P VTG +C+ C P Y F C PC C+ G+
Sbjct: 1263 SRKGTVEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGFYHFP--ECVPCSCNRDGTEPGV 1320
Query: 182 CDP-SGQC 188
CDP +G C
Sbjct: 1321 CDPGTGAC 1328
Score = 225 (84.3 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 57/172 (33%), Positives = 79/172 (45%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTGQC 92
+C+ G GP+CD+C G + + C+ CQC G+ PV CD TGQC
Sbjct: 411 RCLCRPGVEGPRCDSCRSGSYSFPI------CQACQCSTSGSY------PVPCDPETGQC 458
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
C P V G CD+C G Y+ +G S CDP G T D G C C+ VT C
Sbjct: 459 ECLPGVTGRRCDRCLSGAYDFPYCQGSSSV-CDPAG----TMDSSLGYCQCKLHVTSPTC 513
Query: 153 ELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSD 201
+C+P ++ + + GC C C G+ S GQ G +A ++ D
Sbjct: 514 SVCKPLYWDLAKENPRGCSECQCHEAGTVS-GIGECGQEDGDCSCKAHVTGD 564
Score = 218 (81.8 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 44/129 (34%), Positives = 64/129 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
+G C+ C +NT G C+ C GY+G A+ G C C C P T +F C D
Sbjct: 1604 SGVCINCQHNTAGEHCERCQEGYYGSAI---HGSCRVCPC--P---HTNSFATGCAVDGG 1655
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+C+CKP G C++C G++ G C+ C+C+ G TCDP+TG C+ +
Sbjct: 1656 AVRCACKPGYTGAQCERCAPGYFGNPQKFGGSCQPCNCNSNGQFG-TCDPLTGDCVSQEP 1714
Query: 147 VTGTRCELC 155
G+ E C
Sbjct: 1715 KDGSPAEEC 1723
Score = 203 (76.5 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 48/167 (28%), Positives = 71/167 (42%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD-CEPCQCYIPGTLETETFTPVCDQLT 89
TG C +C+ G +CD CL G + C+P GT+ D
Sbjct: 455 TGQC-ECLPGVTGRRCDRCLSGAYDFPYCQGSSSVCDPA-----GTM---------DSSL 499
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRT--CDPITGQCLCRP 145
G C CK HV C C+ ++++ + GC C C G+++ C G C C+
Sbjct: 500 GYCQCKLHVTSPTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGIGECGQEDGDCSCKA 559
Query: 146 GVTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCD-PSGQC 188
VTG C+ C ++ GC+ C CD G+ + C PSG+C
Sbjct: 560 HVTGDACDTCADGYFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGEC 606
Score = 201 (75.8 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 63/187 (33%), Positives = 80/187 (42%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETF 81
K V G C+ C +NT G C+ C GYF G + G C PC C P +
Sbjct: 284 KGVYTGGGVCIDCQHNTAGVNCEKCAKGYFRPHGVPVEALHG-CIPCSCD-PDRADE--- 338
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ- 140
CDQ +G+C CKP+ G C+ C G+YN C P +LN DP+ G
Sbjct: 339 ---CDQGSGRCHCKPNFSGDFCETCADGYYNF---PFCLRIPVFPDYTLNPE-DPMAGNI 391
Query: 141 --CLCR-PGVTGTRCE-----LCQPNHYGFSLDGCK------P----CMCDPIGSNSLQC 182
C C GV C+ LC+P G D C+ P C C GS + C
Sbjct: 392 KGCDCNLEGVLPEICDDRGRCLCRPGVEGPRCDSCRSGSYSFPICQACQCSTSGSYPVPC 451
Query: 183 DP-SGQC 188
DP +GQC
Sbjct: 452 DPETGQC 458
Score = 158 (60.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 35/104 (33%), Positives = 48/104 (46%)
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISG--EG-CKSCDCDPVGSLNRTCDPITGQCL-C 143
L C+C P G +C C G+Y I G C C+C+ G NR C +G C+ C
Sbjct: 1554 LVEMCTCPPDYTGDSCQGCRPGYYRDIKSFPAGRCVPCNCN--GHSNR-CQDGSGVCINC 1610
Query: 144 RPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
+ G CE CQ +YG ++ G C+ C C S + C G
Sbjct: 1611 QHNTAGEHCERCQEGYYGSAIHGSCRVCPCPHTNSFATGCAVDG 1654
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+C P ++ + G ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 1637 VCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNS 1695
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
G T CD LTG C + G+ ++C+
Sbjct: 1696 NGQFGT------CDPLTGDCVSQEPKDGSPAEECD 1724
Score = 61 (26.5 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 162 FSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
F +G PC C P G+ C P G P
Sbjct: 1164 FYHNGAVPCECHPAGAAVHHCSPEGGAP 1191
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 30 TTGDCLKCIYNTGGPQCD--TCLPGYFGDALALPKGDCEPC 68
T G + CI G D LP + +A AL EPC
Sbjct: 748 TPGTWIACI-QVEGVLLDYLVLLPRDYYEAFALQVPVTEPC 787
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 268 (99.4 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 58/161 (36%), Positives = 79/161 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C C + G QC C GY+G P C+PC C G +CD++TG+
Sbjct: 1286 GQC-PCRPSVIGRQCTRCRMGYYG----FPH--CKPCNC---GPR-------LCDEMTGK 1328
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCD---PVGSLNRTCDPITGQCLCRPGVT 148
C C PH V C+ C+ ++ GC+ C+C VG+ R CD GQC C+P +T
Sbjct: 1329 CLCPPHTVRPQCEVCDTHSFSFHPLAGCEGCNCSRRGTVGAATRECDRDHGQCRCKPRIT 1388
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G +C+ C Y F C PC C+ G+ S CDP +G C
Sbjct: 1389 GRQCDRCASGFYHFP--ECIPCHCNKDGTESGVCDPGTGVC 1427
Score = 260 (96.6 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 64/180 (35%), Positives = 85/180 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALP-------------KGDCEPCQCYIPGT 75
+G C C N G C+ C GY F L +P GD + C C G
Sbjct: 440 SGRCT-CKPNFQGDNCEKCAVGYYNFPFCLRIPIFPVSTPSPEDPVAGDIKGCDCNWEGV 498
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCD 135
L +CD G+C C+P V G CD C VG Y+ C++C C +GS C+
Sbjct: 499 LPE-----ICDAY-GRCLCRPGVEGPRCDACRVGFYSFPI---CQACQCSVLGSYQTPCN 549
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFS-LDGCKPCMCDPIGS--NSL---QCDPSGQCP 189
P+TGQC C+PG+TG RC+ C Y F G + +CDP G+ +SL QC P + P
Sbjct: 550 PVTGQCECQPGITGQRCDRCLSGAYDFPHCQGSRS-VCDPAGTLDSSLGYCQCKPHAESP 608
Score = 258 (95.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 59/153 (38%), Positives = 73/153 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG CL C +T PQC+ C F P CE C C GT+ T CD+ G
Sbjct: 1326 TGKCL-CPPHTVRPQCEVCDTHSFSFH---PLAGCEGCNCSRRGTVGAATRE--CDRDHG 1379
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP + G CD+C G Y+ C C C+ G+ + CDP TG CLC+ V GT
Sbjct: 1380 QCRCKPRITGRQCDRCASGFYHFPE---CIPCHCNKDGTESGVCDPGTGVCLCKENVEGT 1436
Query: 151 RCELCQPNHYGFSLD-----GCKPCMCDPIGSN 178
C +C+ F LD GC C C I S+
Sbjct: 1437 ECNVCREG--SFYLDPANPKGCTSCFCFGINSH 1467
Score = 243 (90.6 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 54/171 (31%), Positives = 84/171 (49%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
+C+ G GP+CD C G++ + C+ CQC + G+ +T P C+ +TGQC
Sbjct: 508 RCLCRPGVEGPRCDACRVGFYSFPI------CQACQCSVLGSYQT----P-CNPVTGQCE 556
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
C+P + G CD+C G Y+ +G +S CDP G+L D G C C+P C
Sbjct: 557 CQPGITGQRCDRCLSGAYDFPHCQGSRSV-CDPAGTL----DSSLGYCQCKPHAESPSCS 611
Query: 154 LCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPSGQCPGVFMNRAEMSSD 201
+C+P ++ + + GC C C G+ S GQ G ++ +S D
Sbjct: 612 ICKPLYWNLAKENPNGCSECQCHVAGTVS-GIGECGQRDGDCHCKSHVSGD 661
Score = 238 (88.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 55/155 (35%), Positives = 74/155 (47%)
Query: 43 GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGT 101
G C C PGY+ D G C PC C + C +G C +C+ + G
Sbjct: 1665 GDSCQGCSPGYYRDNRGSYTGRCVPCNC--------NGHSNRCQDGSGICINCQHNTAGE 1716
Query: 102 NCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITG---QCLCRPGVTGTRCELCQP 157
+C++C+ GHY N I G C C C S C +TG +C C+PG TGT+CE C P
Sbjct: 1717 HCERCKEGHYRNTIHGS-CSVCPCPHSNSFATGC-VVTGGNVRCSCKPGYTGTQCERCAP 1774
Query: 158 NHYGF--SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
++G G C+PC C+ G S C P +G C
Sbjct: 1775 GYFGNPQKFGGSCQPCNCNSNGHLS-SCHPLTGDC 1808
Score = 236 (88.1 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 51/149 (34%), Positives = 71/149 (47%)
Query: 16 CVGPPS--DILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G S D ++ + G C +C + P C C P Y+ A P G C CQC++
Sbjct: 579 CQGSRSVCDPAGTLDSSLGYC-QCKPHAESPSCSICKPLYWNLAKENPNG-CSECQCHVA 636
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLN 131
GT+ C Q G C CK HV G +CD CE G++ + GC+ C CD G++
Sbjct: 637 GTVSG---IGECGQRDGDCHCKSHVSGDSCDTCEDGYFALKKSNYFGCQGCQCDIGGAVT 693
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHY 160
C +G C CR V G C+ + N+Y
Sbjct: 694 PMCSGPSGGCHCREHVVGKACQRPENNYY 722
Score = 230 (86.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 46/127 (36%), Positives = 66/127 (51%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDP 126
PC+C+ G + P C GQC C+P V+G C +C +G+Y CK C+C P
Sbjct: 1268 PCECHPTGAIGR----P-CSPEGGQCPCRPSVIGRQCTRCRMGYYGF---PHCKPCNCGP 1319
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS-LDGCKPCMCD---PIGSNSLQC 182
R CD +TG+CLC P +CE+C + + F L GC+ C C +G+ + +C
Sbjct: 1320 -----RLCDEMTGKCLCPPHTVRPQCEVCDTHSFSFHPLAGCEGCNCSRRGTVGAATREC 1374
Query: 183 DPS-GQC 188
D GQC
Sbjct: 1375 DRDHGQC 1381
Score = 213 (80.0 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 59/180 (32%), Positives = 82/180 (45%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C +NT G C+ C GY+ G + P G C PC C P + C+
Sbjct: 388 GVCINCQHNTAGINCENCAKGYYRPYGVPVDAPHG-CIPCSCN-PEHADD------CEPG 439
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ---CLCR- 144
+G+C+CKP+ G NC++C VG+YN C PV + + DP+ G C C
Sbjct: 440 SGRCTCKPNFQGDNCEKCAVGYYNF---PFCLRIPIFPVSTPSPE-DPVAGDIKGCDCNW 495
Query: 145 PGVTGTRCE-----LCQPNHYGFSLDGCK------P----CMCDPIGSNSLQCDP-SGQC 188
GV C+ LC+P G D C+ P C C +GS C+P +GQC
Sbjct: 496 EGVLPEICDAYGRCLCRPGVEGPRCDACRVGFYSFPICQACQCSVLGSYQTPCNPVTGQC 555
Score = 200 (75.5 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 50/166 (30%), Positives = 70/166 (42%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C +C G +CD CL G A P C GTL D G
Sbjct: 552 TGQC-ECQPGITGQRCDRCLSG----AYDFPHCQGSRSVCDPAGTL---------DSSLG 597
Query: 91 QCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRT--CDPITGQCLCRPG 146
C CKPH +C C+ ++N+ + GC C C G+++ C G C C+
Sbjct: 598 YCQCKPHAESPSCSICKPLYWNLAKENPNGCSECQCHVAGTVSGIGECGQRDGDCHCKSH 657
Query: 147 VTGTRCELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCD-PSGQC 188
V+G C+ C+ ++ GC+ C CD G+ + C PSG C
Sbjct: 658 VSGDSCDTCEDGYFALKKSNYFGCQGCQCDIGGAVTPMCSGPSGGC 703
Score = 193 (73.0 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 41/130 (31%), Positives = 66/130 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C G++ + + G C C C P + +F C +TG
Sbjct: 1703 SGICINCQHNTAGEHCERCKEGHYRNTI---HGSCSVCPC--P---HSNSFATGC-VVTG 1753
Query: 91 ---QCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRP 145
+CSCKP GT C++C G++ G C+ C+C+ G L+ +C P+TG C+ +
Sbjct: 1754 GNVRCSCKPGYTGTQCERCAPGYFGNPQKFGGSCQPCNCNSNGHLS-SCHPLTGDCINQE 1812
Query: 146 GVTGTRCELC 155
+ E C
Sbjct: 1813 PKDDSPAEEC 1822
Score = 166 (63.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 32/73 (43%), Positives = 41/73 (56%)
Query: 117 EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+G C+C P G++ R C P GQC CRP V G +C C+ +YGF CKPC C P
Sbjct: 1264 KGALPCECHPTGAIGRPCSPEGGQCPCRPSVIGRQCTRCRMGYYGFP--HCKPCNCGP-- 1319
Query: 177 SNSLQCDP-SGQC 188
L CD +G+C
Sbjct: 1320 --RL-CDEMTGKC 1329
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 33/100 (33%), Positives = 46/100 (46%)
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGE--G-CKSCDCDPVGSLNRTCDPITGQCL-CRPGV 147
C+C P G +C C G+Y G G C C+C+ G NR C +G C+ C+
Sbjct: 1657 CACPPDYTGDSCQGCSPGYYRDNRGSYTGRCVPCNCN--GHSNR-CQDGSGICINCQHNT 1713
Query: 148 TGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSG 186
G CE C+ HY ++ G C C C S + C +G
Sbjct: 1714 AGEHCERCKEGHYRNTIHGSCSVCPCPHSNSFATGCVVTG 1753
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 32/98 (32%), Positives = 42/98 (42%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+C P S+ + TG ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 1736 VCPCPHSNSFATGCVVTGGNVRCSCKPGYTGTQCERCAPGYFGNPQKFG-GSCQPCNCNS 1794
Query: 73 PGTLETETFTPVCDQLTGQC---SCKPHVVGTNCDQCE 107
G L + C LTG C K CD C+
Sbjct: 1795 NGHLSS------CHPLTGDCINQEPKDDSPAEECDDCD 1826
>UNIPROTKB|F1P3E3 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0007213 "G-protein
coupled acetylcholine receptor signaling pathway" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 IPI:IPI00603573 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 Ensembl:ENSGALT00000003171
Uniprot:F1P3E3
Length = 1952
Score = 263 (97.6 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 55/146 (37%), Positives = 72/146 (49%)
Query: 49 CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
C P AL + C CQC G+ + CD TGQCSCKP V G CD+CE
Sbjct: 656 CCPDNMTLALGVGAAGCPSTCQCNPYGS-----YGGTCDPATGQCSCKPGVGGLKCDRCE 710
Query: 108 VGHYN---II--SGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
G +N I+ S GC C+CDPVGS+ C+ +TG C C+ G+TG +C C PN
Sbjct: 711 PGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQC-PNGSKM 769
Query: 163 SLDGCKPCMCDPIGSNSLQCDPSGQC 188
+ GC+ P + C+ C
Sbjct: 770 GMAGCEKDPSAPKSCEEMSCEFGATC 795
Score = 167 (63.8 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 41/120 (34%), Positives = 57/120 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
TG C C GG +CD C PG+ F + K C PC C G++ + C+Q+
Sbjct: 692 TGQC-SCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDD-----CEQM 745
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TG CSCK + G C+QC G S G C+ DP S ++C+ ++ C G T
Sbjct: 746 TGLCSCKTGITGMKCNQCPNG-----SKMGMAGCEKDP--SAPKSCEEMS----CEFGAT 794
>UNIPROTKB|F1NWQ6 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0043236 "laminin binding" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR000152 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0045944 GO:GO:0007009 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605
GO:GO:0043113 GO:GO:0007213 PROSITE:PS01186 GO:GO:0030548
GO:GO:2000541 GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 EMBL:AADN02040845 EMBL:AADN02040846
EMBL:AADN02040847 EMBL:AADN02040848 EMBL:AADN02040849
EMBL:AADN02040850 EMBL:AADN02077829 IPI:IPI01017232
Ensembl:ENSGALT00000040179 Uniprot:F1NWQ6
Length = 1998
Score = 263 (97.6 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 55/146 (37%), Positives = 72/146 (49%)
Query: 49 CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
C P AL + C CQC G+ + CD TGQCSCKP V G CD+CE
Sbjct: 706 CCPDNMTLALGVGAAGCPSTCQCNPYGS-----YGGTCDPATGQCSCKPGVGGLKCDRCE 760
Query: 108 VGHYN---II--SGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
G +N I+ S GC C+CDPVGS+ C+ +TG C C+ G+TG +C C PN
Sbjct: 761 PGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQC-PNGSKM 819
Query: 163 SLDGCKPCMCDPIGSNSLQCDPSGQC 188
+ GC+ P + C+ C
Sbjct: 820 GMAGCEKDPSAPKSCEEMSCEFGATC 845
Score = 167 (63.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 41/120 (34%), Positives = 57/120 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
TG C C GG +CD C PG+ F + K C PC C G++ + C+Q+
Sbjct: 742 TGQC-SCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDD-----CEQM 795
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TG CSCK + G C+QC G S G C+ DP S ++C+ ++ C G T
Sbjct: 796 TGLCSCKTGITGMKCNQCPNG-----SKMGMAGCEKDP--SAPKSCEEMS----CEFGAT 844
>UNIPROTKB|P31696 [details] [associations]
symbol:AGRN "Agrin" species:9031 "Gallus gallus"
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007171 "activation of transmembrane receptor protein tyrosine
kinase activity" evidence=IDA] [GO:0035374 "chondroitin sulfate
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045202 "synapse" evidence=ISS] [GO:0045887 "positive
regulation of synaptic growth at neuromuscular junction"
evidence=ISS] [GO:0043236 "laminin binding" evidence=IDA]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISS] [GO:0051491 "positive regulation of filopodium
assembly" evidence=ISS] [GO:0033691 "sialic acid binding"
evidence=IDA] [GO:0043395 "heparan sulfate proteoglycan binding"
evidence=IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0002162
"dystroglycan binding" evidence=IDA] [GO:0043113 "receptor
clustering" evidence=ISS;IDA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IDA] [GO:0030297 "transmembrane
receptor protein tyrosine kinase activator activity" evidence=IDA]
[GO:0005605 "basal lamina" evidence=ISS] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 PROSITE:PS50026 PROSITE:PS51121 PROSITE:PS51465
SMART:SM00181 SMART:SM00280 InterPro:IPR000152 GO:GO:0007275
GO:GO:0005615 GO:GO:0009986 GO:GO:0030154 GO:GO:0043525
GO:GO:0045887 GO:GO:0045944 GO:GO:0007009 GO:GO:0008201
GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043236 GO:GO:0043113
GO:GO:0007213 PROSITE:PS01186 GO:GO:0033691 GO:GO:0002162
EMBL:U35613 EMBL:M94271 EMBL:M97371 EMBL:M97372 EMBL:U07271
IPI:IPI00579891 IPI:IPI00590466 IPI:IPI00592771 IPI:IPI00597536
IPI:IPI00603573 IPI:IPI00786263 PIR:JH0591 RefSeq:NP_990858.1
UniGene:Gga.4448 UniGene:Gga.48948 PDB:1JB3 PDB:1JC7 PDB:1PXU
PDB:1PZ7 PDB:1PZ8 PDB:1PZ9 PDB:1Q56 PDB:3I70 PDBsum:1JB3
PDBsum:1JC7 PDBsum:1PXU PDBsum:1PZ7 PDBsum:1PZ8 PDBsum:1PZ9
PDBsum:1Q56 PDBsum:3I70 ProteinModelPortal:P31696 SMR:P31696
IntAct:P31696 STRING:P31696 PRIDE:P31696 GeneID:396538
KEGG:gga:396538 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 OrthoDB:EOG4HQDHD
EvolutionaryTrace:P31696 NextBio:20816574 GO:GO:0030548
GO:GO:0035374 GO:GO:0043395 GO:GO:0030297 GO:GO:0051491
GO:GO:2000541 GO:GO:0032321 GO:GO:0032314 InterPro:IPR002049
InterPro:IPR003645 InterPro:IPR001791 InterPro:IPR000082
InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
SUPFAM:SSF50242 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 Uniprot:P31696
Length = 2081
Score = 263 (97.6 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 55/146 (37%), Positives = 72/146 (49%)
Query: 49 CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
C P AL + C CQC G+ + CD TGQCSCKP V G CD+CE
Sbjct: 773 CCPDNMTLALGVGAAGCPSTCQCNPYGS-----YGGTCDPATGQCSCKPGVGGLKCDRCE 827
Query: 108 VGHYN---II--SGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
G +N I+ S GC C+CDPVGS+ C+ +TG C C+ G+TG +C C PN
Sbjct: 828 PGFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQC-PNGSKM 886
Query: 163 SLDGCKPCMCDPIGSNSLQCDPSGQC 188
+ GC+ P + C+ C
Sbjct: 887 GMAGCEKDPSAPKSCEEMSCEFGATC 912
Score = 167 (63.8 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 41/120 (34%), Positives = 57/120 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
TG C C GG +CD C PG+ F + K C PC C G++ + C+Q+
Sbjct: 809 TGQC-SCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPVGSVRDD-----CEQM 862
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TG CSCK + G C+QC G S G C+ DP S ++C+ ++ C G T
Sbjct: 863 TGLCSCKTGITGMKCNQCPNG-----SKMGMAGCEKDP--SAPKSCEEMS----CEFGAT 911
>UNIPROTKB|F1NSZ5 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0050873 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 OMA:QLDDYNA
EMBL:AADN02002050 EMBL:AADN02002048 EMBL:AADN02002049
IPI:IPI00578400 Ensembl:ENSGALT00000024193 Uniprot:F1NSZ5
Length = 1766
Score = 262 (97.3 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 60/173 (34%), Positives = 82/173 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C NT G C+ C G+ GD + C+PC C +P E F C + G
Sbjct: 29 SGICVDCQRNTTGEHCEQCPDGFVGDVVGGAPTFCQPCPCPLP---EAANFAVSCYRKNG 85
Query: 91 --QCSCKPHVVGTNCDQCE---VGHYN--IISGEGCKSCDC----DPVGSLNRTCDPITG 139
+C CK + G NC+ C G+Y ++ G CK CDC DP + CD +TG
Sbjct: 86 NVRCVCKENYAGPNCESCAGVPPGYYGNPLLIGSTCKKCDCSGNSDP-NLIFEDCDEVTG 144
Query: 140 QCL-CRPGVTGTRCELCQPNHYGFSL--DGCKPCMCDPIGSNSLQCDP-SGQC 188
QC C TG +CE C P +YG ++ C C C G CD +G+C
Sbjct: 145 QCRNCLHHTTGFKCEQCAPGYYGDAIFAKNCTACNC---GGR--MCDSRTGEC 192
Score = 209 (78.6 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 47/126 (37%), Positives = 65/126 (51%)
Query: 34 CLKCIYNTGGPQCDTCL---PGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
C+ C N GP C++C PGY+G+ L + C+ C C G + CD++TG
Sbjct: 89 CV-CKENYAGPNCESCAGVPPGYYGNPLLIGS-TCKKCDC--SGNSDPNLIFEDCDEVTG 144
Query: 91 QC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNRTCDPITGQCLC-RPGV 147
QC +C H G C+QC G+Y + I + C +C+C R CD TG+CL P V
Sbjct: 145 QCRNCLHHTTGFKCEQCAPGYYGDAIFAKNCTACNCG-----GRMCDSRTGECLADSPLV 199
Query: 148 -TGTRC 152
TGT C
Sbjct: 200 STGTDC 205
Score = 132 (51.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 44/158 (27%), Positives = 64/158 (40%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C G++ + G C PC C G C +G C C+ + G +C+QC
Sbjct: 1 CQEGFYRTS----SGKCSPCNCN--GNANR------CLDGSGICVDCQRNTTGEHCEQCP 48
Query: 108 VGHY-NIISGEG--CKSCDCDPVGSLNR--TCDPITG--QCLCRPGVTGTRCELCQ---P 157
G +++ G C+ C C + N +C G +C+C+ G CE C P
Sbjct: 49 DGFVGDVVGGAPTFCQPCPCPLPEAANFAVSCYRKNGNVRCVCKENYAGPNCESCAGVPP 108
Query: 158 NHYGFSL---DGCKPCMCDPIGSNSL---QCDP-SGQC 188
+YG L CK C C +L CD +GQC
Sbjct: 109 GYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQC 146
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/92 (34%), Positives = 46/92 (50%)
Query: 16 CVG--PPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C G P+ I + TG C C+++T G +C+ C PGY+GDA+ K +C C C
Sbjct: 126 CSGNSDPNLIFEDCDEVTGQCRNCLHHTTGFKCEQCAPGYYGDAI-FAK-NCTACNC--G 181
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVV--GTNC 103
G + CD TG+C +V GT+C
Sbjct: 182 GRM--------CDSRTGECLADSPLVSTGTDC 205
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 265 (98.3 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 62/182 (34%), Positives = 87/182 (47%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
G C+ C +NT G C+ C GY+ G P G C C C LE C++
Sbjct: 387 GVCINCQHNTAGVNCEKCAKGYYRPYGVPARAPDG-CISCPC----DLER---AEGCEEG 438
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNI---------------------ISGEGCKSCDCDPV 127
+G+C CK + G NC+ C G Y+ I+G+ C+C+ V
Sbjct: 439 SGRCFCKWNFQGENCEHCADGFYSFPFCIRKDIPVYPFTSPNPRDAIAGD-ITVCECNSV 497
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-G 186
G+ CD G+CLCR GV G +C+ CQP H+ F + C+ C C P+GS C+P+ G
Sbjct: 498 GTQPEVCD-FLGRCLCRSGVVGLQCDSCQPGHHSFPV--CEACQCSPLGSRHSICEPTTG 554
Query: 187 QC 188
QC
Sbjct: 555 QC 556
Score = 256 (95.2 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 56/156 (35%), Positives = 75/156 (48%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKP 96
C N G QC C GY+G P C+ C C G +CD LTG+C C P
Sbjct: 1298 CRPNVIGRQCSRCQTGYYG----FPS--CKLCNC---GQR-------LCDDLTGKCICPP 1341
Query: 97 HVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRT---CDPITGQCLCRPGVTGTRCE 153
V C+ CE +++ GC+SC+C G +N C+ GQC C+PG+ G +C+
Sbjct: 1342 RTVKPKCEVCERYYFSYHPLAGCESCNCSERGVVNAARPECEKNNGQCKCKPGIRGRQCD 1401
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C P Y F C PC C+ G+ CDP +G C
Sbjct: 1402 RCAPGTYDFP--NCIPCKCNRDGTEPDVCDPQTGIC 1435
Score = 255 (94.8 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 55/153 (35%), Positives = 72/153 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TG C+ C T P+C+ C YF P CE C C G + P C++ G
Sbjct: 1334 TGKCI-CPPRTVKPKCEVCERYYFSYH---PLAGCESCNCSERGVVNAAR--PECEKNNG 1387
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
QC CKP + G CD+C G Y+ C C C+ G+ CDP TG CLC+ V G
Sbjct: 1388 QCKCKPGIRGRQCDRCAPGTYDF---PNCIPCKCNRDGTEPDVCDPQTGICLCKENVEGA 1444
Query: 151 RCELCQPNHYGFSLD-----GCKPCMCDPIGSN 178
C++C+P F LD GC C C + S+
Sbjct: 1445 ECDICRPG--SFYLDPSNPKGCTTCFCFGVTSS 1475
Score = 249 (92.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 53/139 (38%), Positives = 71/139 (51%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
SV +G C +C+ + GP C C P Y+ A P+G C CQC + GTL C
Sbjct: 592 SVDSHSGYC-QCLQHVEGPTCSKCKPLYWNLAEENPEG-CTACQCDVSGTLSG---VGEC 646
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITGQCLC 143
Q TG+C CK +V G C+ CE G+Y + + GCK C CD GS++ C +G C C
Sbjct: 647 QQETGRCYCKSNVCGDFCNTCEAGYYALENKNYFGCKGCQCDVGGSISFACAEPSGACQC 706
Query: 144 RPGVTGTRCELCQPNHYGF 162
R V G C+ +Y F
Sbjct: 707 REHVVGKACQERPEKNYFF 725
Score = 240 (89.5 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 56/167 (33%), Positives = 80/167 (47%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C +C N G QCD C+ A P + +C G++++ +
Sbjct: 552 TTGQC-ECQTNVTGRQCDRCISA----APNFPYCEGINSECNPSGSVDSHS--------- 597
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPVGSLNRT--CDPITGQCLCRP 145
G C C HV G C +C+ ++N+ + EGC +C CD G+L+ C TG+C C+
Sbjct: 598 GYCQCLQHVEGPTCSKCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRCYCKS 657
Query: 146 GVTGTRCELCQPNHYGF---SLDGCKPCMCDPIGSNSLQC-DPSGQC 188
V G C C+ +Y + GCK C CD GS S C +PSG C
Sbjct: 658 NVCGDFCNTCEAGYYALENKNYFGCKGCQCDVGGSISFACAEPSGAC 704
Score = 232 (86.7 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 64/191 (33%), Positives = 90/191 (47%)
Query: 16 CVGPPSDILKSVAGT---TGDCLKCIYNTGGPQCDTCLPGYFGDALALPK---------- 62
C+ P D L+ G +G C C +N G C+ C G++ + K
Sbjct: 422 CISCPCD-LERAEGCEEGSGRCF-CKWNFQGENCEHCADGFYSFPFCIRKDIPVYPFTSP 479
Query: 63 -------GDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIIS 115
GD C+C GT + E VCD L G+C C+ VVG CD C+ GH++
Sbjct: 480 NPRDAIAGDITVCECNSVGT-QPE----VCDFL-GRCLCRSGVVGLQCDSCQPGHHSF-- 531
Query: 116 GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
C++C C P+GS + C+P TGQC C+ VTG +C+ C F P C+
Sbjct: 532 -PVCEACQCSPLGSRHSICEPTTGQCECQTNVTGRQCDRCISAAPNF------P-YCE-- 581
Query: 176 GSNSLQCDPSG 186
G NS +C+PSG
Sbjct: 582 GINS-ECNPSG 591
Score = 218 (81.8 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 54/161 (33%), Positives = 80/161 (49%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
+C+ +G G QCD+C PG+ + P CE CQC G+ + +C+ TGQC
Sbjct: 509 RCLCRSGVVGLQCDSCQPGHH----SFPV--CEACQCSPLGSRHS-----ICEPTTGQCE 557
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
C+ +V G CD+C N EG S +C+P GS+ D +G C C V G C
Sbjct: 558 CQTNVTGRQCDRCISAAPNFPYCEGINS-ECNPSGSV----DSHSGYCQCLQHVEGPTCS 612
Query: 154 LCQPNHYGFSLD---GCKPCMCDPIGSNSL--QCDP-SGQC 188
C+P ++ + + GC C CD G+ S +C +G+C
Sbjct: 613 KCKPLYWNLAEENPEGCTACQCDVSGTLSGVGECQQETGRC 653
Score = 206 (77.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 51/170 (30%), Positives = 74/170 (43%)
Query: 26 SVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
S+A C C G C C G++ ++ L G C PC C G C
Sbjct: 1659 SIAYNVETC-SCPPEYAGDSCQDCGLGFYRESKGLFSGRCVPCNCN--GNSNR------C 1709
Query: 86 DQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITG--QCL 142
TG+C +C+ + G C+ C+ G++ + C+ C C C G QCL
Sbjct: 1710 HDGTGKCINCQYNTAGEKCELCKDGYFGDATQGSCRICPCPYTNRFATGCVANGGEIQCL 1769
Query: 143 CRPGVTGTRCELCQPNHYGF--SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
C+ G TG RCE C P ++G G C+ C C+ G + CD +G+C
Sbjct: 1770 CKEGYTGVRCERCAPGYFGNPQKYGGYCQKCNCNNNGQLA-SCDRLTGEC 1818
Score = 169 (64.5 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 54/174 (31%), Positives = 75/174 (43%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPK--G-DCEPCQCYIPG-----TLETETFTP 83
GD C N+ G Q + C + G L G C+ CQ PG E +P
Sbjct: 487 GDITVCECNSVGTQPEVC--DFLGRCLCRSGVVGLQCDSCQ---PGHHSFPVCEACQCSP 541
Query: 84 ------VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
+C+ TGQC C+ +V G CD+C N EG S +C+P GS+ D
Sbjct: 542 LGSRHSICEPTTGQCECQTNVTGRQCDRCISAAPNFPYCEGINS-ECNPSGSV----DSH 596
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGV 191
+G C C V G C C+P ++ + + +P G + QCD SG GV
Sbjct: 597 SGYCQCLQHVEGPTCSKCKPLYWNLAEE-------NPEGCTACQCDVSGTLSGV 643
Score = 164 (62.8 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 40/126 (31%), Positives = 58/126 (46%)
Query: 67 PCQCYIPGTLETETFTPVCDQLTGQCSCKP-HVVGTNCDQ-CEVGHYNIIS--GEGCKSC 122
P Y L+ +T D +T QC H+ C+ ++++ G C
Sbjct: 1219 PADSYSYKILDKKTVDKSFDFIT-QCGGNSFHIDPERSSAFCKDSARSLVAFYNNGAVPC 1277
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQC 182
+C GS++ TC P+ GQC+CRP V G +C CQ +YGF CK C C L
Sbjct: 1278 NCHSEGSMSPTCSPLGGQCICRPNVIGRQCSRCQTGYYGFP--SCKLCNC----GQRLCD 1331
Query: 183 DPSGQC 188
D +G+C
Sbjct: 1332 DLTGKC 1337
Score = 155 (59.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/104 (38%), Positives = 51/104 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C KC G QCD C PG + P +C PC+C GT E + VCD TG
Sbjct: 1387 GQC-KCKPGIRGRQCDRCAPGTYD----FP--NCIPCKCNRDGT-EPD----VCDPQTGI 1434
Query: 92 CSCKPHVVGTNCDQCEVGHYNI--ISGEGCKSCDCDPVGSLNRT 133
C CK +V G CD C G + + + +GC +C C V S R+
Sbjct: 1435 CLCKENVEGAECDICRPGSFYLDPSNPKGCTTCFCFGVTSSCRS 1478
>FB|FBgn0261451 [details] [associations]
symbol:trol "terribly reduced optic lobes" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=NAS] [GO:0005604 "basement membrane" evidence=ISS]
[GO:0055059 "asymmetric neuroblast division" evidence=NAS]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0072347 "response to anesthetic" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005811 EMBL:AE014298 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 GO:GO:0045199 GO:GO:0072347 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF02210 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 UniGene:Dm.14114
GeneID:45320 KEGG:dme:Dmel_CG33950 CTD:45320 FlyBase:FBgn0261451
ChiTaRS:trol GenomeRNAi:45320 NextBio:838006 RefSeq:NP_001027038.2
ProteinModelPortal:Q9W4Y3 SMR:Q9W4Y3 STRING:Q9W4Y3 PRIDE:Q9W4Y3
UCSC:CG33950-RF InParanoid:Q9W4Y3 PhylomeDB:Q9W4Y3
ArrayExpress:Q9W4Y3 Bgee:Q9W4Y3 Uniprot:Q9W4Y3
Length = 4629
Score = 192 (72.6 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 44/116 (37%), Positives = 58/116 (50%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY------IPG--TLETETFT 82
TGDC +C NT GP C+ C GY GDA DC+P + Y PG TLE +
Sbjct: 2476 TGDCEECSDNTEGPSCERCAAGYVGDATRGTIYDCQPDEGYPIPSPPAPGNQTLECTAYC 2535
Query: 83 PV---CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRT 133
+ D +C CK +V+G CDQC G Y + + +GCK C C + S R+
Sbjct: 2536 QIEGIYDCRGNECLCKRNVIGDQCDQCRPGTYGLSAQNQDGCKECYCSGLASQCRS 2591
Score = 162 (62.1 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 54/184 (29%), Positives = 76/184 (41%)
Query: 29 GTTGD-CLKC----IYNTGGP---QC-----DTCLPGYFGDAL-ALPKGDCEPCQCYIPG 74
G GD C C + GGP C D+C G +GD +P C+ C C + G
Sbjct: 2063 GYVGDSCESCASGYVRQPGGPWLGHCVPFIPDSCPSGTYGDPRRGVP---CKECPCPLTG 2119
Query: 75 TLETETFTPVCDQLT-GQ--CSCKPHVVGTNCDQCEVGHY-NIISGEG-CK-----SCDC 124
+ F C Q G C C G C+QC G+ N ++ G C+ SC+
Sbjct: 2120 S---NNFASGCQQSPDGDVVCRCNEGYTGRRCEQCAAGYQGNPLAAGGICRRIPDTSCNV 2176
Query: 125 DPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHY---GFSLDGCKPCMCDPIGSNSLQ 181
D S++ G C C+ V G +C+ C+ + F+ GC C C +G L
Sbjct: 2177 DGTYSVHSN-----GTCQCKDSVIGEQCDTCKSKSFHLNSFTYTGCIECFCSGVG---LD 2228
Query: 182 CDPS 185
CD S
Sbjct: 2229 CDSS 2232
Score = 153 (58.9 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 53/190 (27%), Positives = 74/190 (38%)
Query: 9 SVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALA-LPKGDCEP 67
S+ + L V P+++ A C +C G C+ C PGY D + G C P
Sbjct: 2404 SLRQVTLDVATPTNLGTPRAVEVEQC-RCPEGYLGLSCEQCAPGYARDPEGGIYLGLCRP 2462
Query: 68 CQCYIPGTL---ETETFTPVCDQLTG-QCS-CKPHVVGT----NCDQCEVGH-YNIIS-- 115
C+C +T D G C C VG C+ Y I S
Sbjct: 2463 CECNGHSKYCNSDTGDCEECSDNTEGPSCERCAAGYVGDATRGTIYDCQPDEGYPIPSPP 2522
Query: 116 GEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSL---DGCKPCMC 172
G ++ +C + D +CLC+ V G +C+ C+P YG S DGCK C C
Sbjct: 2523 APGNQTLECTAYCQIEGIYDCRGNECLCKRNVIGDQCDQCRPGTYGLSAQNQDGCKECYC 2582
Query: 173 DPIGSNSLQC 182
+ S QC
Sbjct: 2583 SGLAS---QC 2589
Score = 128 (50.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 40/114 (35%), Positives = 50/114 (43%)
Query: 32 GDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCE--P-CQCYIPGTLETETFTPVCD 86
GD + C N G G +C+ C GY G+ LA G C P C + GT +
Sbjct: 2133 GDVV-CRCNEGYTGRRCEQCAAGYQGNPLAAG-GICRRIPDTSCNVDGTYSVHS------ 2184
Query: 87 QLTGQCSCKPHVVGTNCDQCEVG--HYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
G C CK V+G CD C+ H N + GC C C VG L+ CD T
Sbjct: 2185 --NGTCQCKDSVIGEQCDTCKSKSFHLNSFTYTGCIECFCSGVG-LD--CDSST 2233
Score = 98 (39.6 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
C C G GT CE C P HY + C C CD SN+ CD
Sbjct: 2779 CQCPSGYVGTSCESCAPLHYRDASGSCSLCPCDV--SNTESCD 2819
Score = 60 (26.2 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 119 CKSCDCDPVGSLNRTCDPITGQ---CLCRPGVTGTRCEL----CQPNHYGF----SLDGC 167
C+ C P + + T Q C+C+PG TG C + C P G + +
Sbjct: 4099 CRPCAQGPCQNKGVCLESQTEQAYTCICQPGWTGRDCAIEGTQCTPGVCGAGRCENTEND 4158
Query: 168 KPCMCDPIGSNSLQC 182
C+C P+ + +C
Sbjct: 4159 MECLC-PLNRSGDRC 4172
Score = 49 (22.3 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDP 174
C+ R + G EL + Y + C+PC P
Sbjct: 4073 CISRLTLQGRTVELIREAKYKEGITDCRPCAQGP 4106
>UNIPROTKB|F1LWS0 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
InterPro:IPR000034 Pfam:PF00052 PROSITE:PS51115 GO:GO:0005606
IPI:IPI00566251 Ensembl:ENSRNOT00000051597 ArrayExpress:F1LWS0
Uniprot:F1LWS0
Length = 1728
Score = 251 (93.4 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 58/174 (33%), Positives = 79/174 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G QC+ C PG+ + P C C C P + + F C G
Sbjct: 120 SGTCVGCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPC--PLAVPSNNFADGCILRNG 177
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+ V+ GH+ +GC C C P C+P TGQC CRPG TG
Sbjct: 178 RTQ---RVLE--------GHFGFEQCQGCHPCACGPAAE-GSECNPQTGQCHCRPGTTGP 225
Query: 151 RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFMNRAEMSS 200
+C C P ++G GC+ C C P G CDP +G+C PG+ R + S
Sbjct: 226 QCLECAPGYWGLPEKGCRRCQC-PRG----HCDPHTGRCTCPPGLSGERCDTCS 274
Score = 203 (76.5 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 49/148 (33%), Positives = 72/148 (48%)
Query: 50 LPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVG 109
L G+FG +G C PC C P +E C+ TGQC C+P G C +C G
Sbjct: 183 LEGHFGFEQC--QG-CHPCACG-PAAEGSE-----CNPQTGQCHCRPGTTGPQCLECAPG 233
Query: 110 HYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP 169
++ + +GC+ C C P G CDP TG+C C PG++G RC+ C H + G +P
Sbjct: 234 YWGLPE-KGCRRCQC-PRGH----CDPHTGRCTCPPGLSGERCDTCSQQHQ-VPVPG-RP 285
Query: 170 CMCDPIGSNSLQCDPSGQCPGVFMNRAE 197
GS+ + C+ C + ++ E
Sbjct: 286 ------GSHGIHCEVCDHCVVLLLDDLE 307
Score = 189 (71.6 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 53/161 (32%), Positives = 69/161 (42%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC- 92
C+ C N G C C PGY+ D L G C PCQC+ G + C +G C
Sbjct: 74 CM-CPANYRGDSCQECAPGYYRDTKGLFLGRCVPCQCH--GHSDR------CLPGSGTCV 124
Query: 93 SCKPHVVGTNCDQCEVGHYNIISGEG---CKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C+ + G C++C G + + C SC C N D G C+ R G T
Sbjct: 125 GCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPCPLAVPSNNFAD---G-CILRNGRTQ 180
Query: 150 TRCELCQPNHYGFS-LDGCKPCMCDPIGSNSLQCDP-SGQC 188
E H+GF GC PC C P S +C+P +GQC
Sbjct: 181 RVLE----GHFGFEQCQGCHPCACGPAAEGS-ECNPQTGQC 216
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 244 (91.0 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 59/185 (31%), Positives = 84/185 (45%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCY 71
C G S +K G C +C +NT GP+CD C P ++ A A +C C C
Sbjct: 286 CNGHASKCVKDREGNLV-C-ECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCN 343
Query: 72 IPGT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG-----EGCKSC 122
+ E + + G C +C+ + G +C C+ G+Y +S CK+C
Sbjct: 344 LHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKAISHRRACKAC 403
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGS-NSLQ 181
DC PVG+ +TC+ TGQC C+ GVTG C C Y S PC+ P+ + S
Sbjct: 404 DCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKG-YQQSRSPIAPCIKIPVAAPTSSY 462
Query: 182 CDPSG 186
P G
Sbjct: 463 SSPDG 467
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 244 (91.0 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 58/173 (33%), Positives = 82/173 (47%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCY 71
C G S +K G C +C +NT GP+CD C P ++ A A +C C C
Sbjct: 286 CNGHASRCVKDRDGNLV-C-ECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCN 343
Query: 72 IPGT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISG-----EGCKSC 122
+ E + + G C +C+ + G +C C+ G+Y +S + CK+C
Sbjct: 344 LHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKAC 403
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
DC PVG+ +TC+ TGQC C+ GVTG C C N Y S PC+ PI
Sbjct: 404 DCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCA-NGYQQSRSPIAPCIKIPI 455
>MGI|MGI:1918264 [details] [associations]
symbol:Megf9 "multiple EGF-like-domains 9" species:10090
"Mus musculus" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001368
SMART:SM00208 MGI:MGI:1918264 GO:GO:0016021 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 CTD:1955 eggNOG:NOG302694
HOVERGEN:HBG080442 EMBL:AK035987 EMBL:AK039319 EMBL:AK052434
EMBL:AK122378 IPI:IPI00221701 RefSeq:NP_766282.1 UniGene:Mm.251188
ProteinModelPortal:Q8BH27 SMR:Q8BH27 STRING:Q8BH27
PhosphoSite:Q8BH27 PaxDb:Q8BH27 PRIDE:Q8BH27
Ensembl:ENSMUST00000107359 GeneID:230316 KEGG:mmu:230316
GeneTree:ENSGT00680000100051 HOGENOM:HOG000203602 InParanoid:Q8BH27
OMA:NGCLPCQ NextBio:379877 Bgee:Q8BH27 CleanEx:MM_MEGF9
Genevestigator:Q8BH27 GermOnline:ENSMUSG00000039270 Uniprot:Q8BH27
Length = 600
Score = 242 (90.2 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 49/123 (39%), Positives = 66/123 (53%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDP 126
C C G+L+ + C+Q TGQC C G +CD C+ G Y N G C C C P
Sbjct: 202 CNCSEVGSLDVKR----CNQTTGQCDCHVGYQGLHCDTCKEGFYLNHTVGL-CLPCHCSP 256
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
G+++ C+ +G C C+ GVTG+ C+ CQ HYGF GC PC C+ + S CD +
Sbjct: 257 HGAVSILCNS-SGNCQCKVGVTGSMCDKCQDGHYGFGKTGCLPCQCN---NRSDSCDVHT 312
Query: 186 GQC 188
G C
Sbjct: 313 GAC 315
Score = 213 (80.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 55/162 (33%), Positives = 72/162 (44%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TTG C C G CDTC G++ L G C PC C G + +C+ +
Sbjct: 218 TTGQC-DCHVGYQGLHCDTCKEGFY---LNHTVGLCLPCHCSPHGAVSI-----LCNS-S 267
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVT 148
G C CK V G+ CD+C+ GHY GC C C+ + + +CD TG CL C+
Sbjct: 268 GNCQCKVGVTGSMCDKCQDGHYGF-GKTGCLPCQCN---NRSDSCDVHTGACLNCQENSK 323
Query: 149 GTRCELCQPNHYGFSLDG---CKPCMCDPIGSNSLQCDPSGQ 187
G CE C+ Y S D C C C + S SG+
Sbjct: 324 GEHCEECKEGFYP-SPDAAKQCHRCPCSAVTSTGNCTIESGE 364
Score = 199 (75.1 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 56/187 (29%), Positives = 83/187 (44%)
Query: 14 LLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
L C P + + ++G+C +C G CD C G++G K C PCQC
Sbjct: 250 LPCHCSPHGAVSILCNSSGNC-QCKVGVTGSMCDKCQDGHYG----FGKTGCLPCQC--- 301
Query: 74 GTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLN 131
+ CD TG C +C+ + G +C++C+ G Y + + + C C C V S
Sbjct: 302 -----NNRSDSCDVHTGACLNCQENSKGEHCEECKEGFYPSPDAAKQCHRCPCSAVTSTG 356
Query: 132 RTCDPITGQ----C-LCRPGVTGTRCELCQPNHYGFSLDGCKPCMC----DPIGSNSLQC 182
C +G+ C C+ G TG C C+ +Y S C C C DPI + + C
Sbjct: 357 N-CTIESGELEPTCDQCKDGYTGQNCNKCENGYYN-SDSICTQCECHGHVDPIKTPKI-C 413
Query: 183 DP-SGQC 188
P SG+C
Sbjct: 414 KPESGEC 420
Score = 193 (73.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 47/135 (34%), Positives = 64/135 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI---PG--TLETETFTPVC 85
TG CL C N+ G C+ C G++ A + C C C G T+E+ P C
Sbjct: 312 TGACLNCQENSKGEHCEECKEGFYPSPDAAKQ--CHRCPCSAVTSTGNCTIESGELEPTC 369
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDC----DPVGSLNRTCDPITGQC 141
DQ CK G NC++CE G+YN S C C+C DP+ + + C P +G+C
Sbjct: 370 DQ------CKDGYTGQNCNKCENGYYN--SDSICTQCECHGHVDPIKT-PKICKPESGEC 420
Query: 142 L-CRPGVTGTRCELC 155
+ C TG CE C
Sbjct: 421 INCLHNTTGFWCEKC 435
>UNIPROTKB|O00468 [details] [associations]
symbol:AGRN "Agrin" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0043236 "laminin binding" evidence=TAS]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=TAS] [GO:0045162 "clustering of voltage-gated
sodium channels" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043113 "receptor clustering" evidence=IDA;IMP]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0050808 "synapse organization"
evidence=TAS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=IDA;TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0045202 "synapse"
evidence=ISS] [GO:0045887 "positive regulation of synaptic growth
at neuromuscular junction" evidence=ISS] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=ISS] [GO:0051491
"positive regulation of filopodium assembly" evidence=ISS]
[GO:0035374 "chondroitin sulfate binding" evidence=ISS] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISS] [GO:0005509
"calcium ion binding" evidence=ISS] [GO:0033691 "sialic acid
binding" evidence=ISS] [GO:0002162 "dystroglycan binding"
evidence=ISS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0006024 "glycosaminoglycan biosynthetic
process" evidence=TAS] [GO:0006027 "glycosaminoglycan catabolic
process" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS]
[GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000742 InterPro:IPR002350 InterPro:IPR004850
Pfam:PF00008 Pfam:PF00050 Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026
PROSITE:PS51121 PROSITE:PS51465 SMART:SM00181 SMART:SM00280
GO:GO:0005886 Reactome:REACT_111045 Reactome:REACT_116125
GO:GO:0007411 GO:GO:0005615 GO:GO:0009986 GO:GO:0043525
GO:GO:0005200 GO:GO:0005975 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0050808 GO:GO:0045202
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605 GO:GO:0043236
GO:GO:0043113 Orphanet:98913 GO:GO:0007213 PROSITE:PS01186
GO:GO:0033691 GO:GO:0043202 GO:GO:0002162 CTD:375790
eggNOG:NOG312635 HOGENOM:HOG000033860 HOVERGEN:HBG080471 KO:K06254
OrthoDB:EOG4HQDHD GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 EMBL:U84406 EMBL:AB191264
EMBL:AL645608 EMBL:AF016903 EMBL:BC004220 EMBL:BC007649
EMBL:BC034009 EMBL:BC063620 IPI:IPI00374563 RefSeq:NP_940978.2
UniGene:Hs.273330 ProteinModelPortal:O00468 SMR:O00468
IntAct:O00468 MINT:MINT-4053526 STRING:O00468 PhosphoSite:O00468
PaxDb:O00468 PRIDE:O00468 Ensembl:ENST00000379370 GeneID:375790
KEGG:hsa:375790 UCSC:uc001ack.2 GeneCards:GC01P000946 HGNC:HGNC:329
HPA:HPA040090 MIM:103320 MIM:254300 neXtProt:NX_O00468
PharmGKB:PA24626 InParanoid:O00468 OMA:TNRWLRV GenomeRNAi:375790
NextBio:100617 ArrayExpress:O00468 Bgee:O00468 CleanEx:HS_AGRN
Genevestigator:O00468 GermOnline:ENSG00000188157 GO:GO:0005796
GO:GO:0030204 GO:GO:0045162 GO:GO:0006024 GO:GO:0006027
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 Uniprot:O00468
Length = 2067
Score = 236 (88.1 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 46/126 (36%), Positives = 64/126 (50%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYN----IISGE-GCKSC 122
CQC G+ + CD TGQCSC+P V G CD+CE G +N + G GC C
Sbjct: 793 CQCNPHGS-----YGGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPC 847
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQC 182
CDP G++ C+ +TG C C+PGV G +C C P+ GC+ P ++C
Sbjct: 848 SCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQC-PDGRALGPAGCEADASAPATCAEMRC 906
Query: 183 DPSGQC 188
+ +C
Sbjct: 907 EFGARC 912
Score = 225 (84.3 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 61/177 (34%), Positives = 78/177 (44%)
Query: 32 GDCL---KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ-CYIP--GTLETETFTPVC 85
G C+ C G P C + Y + L K CE + Y+ G TF P+
Sbjct: 701 GPCVCDFSCQSVPGSPVCGSDGVTYSTEC-ELKKARCESQRGLYVAAQGACRGPTFAPLP 759
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCR 144
C+ P+ C Q + + GC S C C+P GS TCDP TGQC CR
Sbjct: 760 PVAPLHCAQTPY----GCCQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCR 815
Query: 145 PGVTGTRCELCQPNHYGF------SLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
PGV G RC+ C+P + F GC PC CDP G+ C+ +G C PGV
Sbjct: 816 PGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGV 872
Score = 41 (19.5 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 63 GDCEPCQCYIP 73
G C+PCQ +P
Sbjct: 315 GPCDPCQGALP 325
>MGI|MGI:1920432 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10090 "Mus musculus" [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IMP;IDA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 MGI:MGI:1920432 GO:GO:0016021
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509 OMA:PPGTWGF
OrthoDB:EOG451DPW EMBL:AF461685 EMBL:AF444274 EMBL:AF440279
EMBL:AK141082 EMBL:AK053551 EMBL:BC042490 EMBL:AK131151
IPI:IPI00283616 IPI:IPI00874618 IPI:IPI00874792 IPI:IPI00874938
RefSeq:NP_001027585.1 RefSeq:NP_001027586.1 RefSeq:NP_082736.1
RefSeq:NP_690012.2 UniGene:Mm.158962 ProteinModelPortal:Q8VIK5
SMR:Q8VIK5 STRING:Q8VIK5 PhosphoSite:Q8VIK5 PaxDb:Q8VIK5
PRIDE:Q8VIK5 Ensembl:ENSMUST00000029714 Ensembl:ENSMUST00000079083
Ensembl:ENSMUST00000090981 Ensembl:ENSMUST00000172621
Ensembl:ENSMUST00000174759 GeneID:73182 KEGG:mmu:73182
UCSC:uc008psq.1 UCSC:uc008psu.1 InParanoid:Q8VIK5 ChiTaRS:PEAR1
NextBio:337625 Bgee:Q8VIK5 CleanEx:MM_PEAR1 Genevestigator:Q8VIK5
Uniprot:Q8VIK5
Length = 1034
Score = 241 (89.9 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 70/191 (36%), Positives = 93/191 (48%)
Query: 18 GPPSDILKSVAGTTGDCLKCIY---NTGGPQ-----CDTCLPGYFGDALALP--KG---- 63
GP ++ S GT G Y N G PQ C +C PG+ G +LP +G
Sbjct: 211 GPSCNVPCS-QGTDGFFCPRTYPCQNGGVPQGSQGSC-SCPPGWMGVICSLPCPEGFHGP 268
Query: 64 DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-K 120
+C + C+C+ G +CD+ TGQC C P +G C ++C VG + G+ C +
Sbjct: 269 NCTQECRCHNGG---------LCDRFTGQCHCAPGYIGDRCQEECPVGRF----GQDCAE 315
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC--ELCQPNHYGFSLDGCKPCMCDPIGSN 178
+CDC P G+ C P G CLC G TG RC LC YG S +PC CDP +
Sbjct: 316 TCDCAP-GA---RCFPANGACLCEHGFTGDRCTERLCPDGRYGLSCQ--EPCTCDP--EH 367
Query: 179 SLQCDPS-GQC 188
SL C P G+C
Sbjct: 368 SLSCHPMHGEC 378
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 53/148 (35%), Positives = 64/148 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C TG QC C PGY GD P G DC E C C PG C
Sbjct: 282 CDRFTG--QCH-CAPGYIGDRCQEECPVGRFGQDCAETCDC-APGAR--------CFPAN 329
Query: 90 GQCSCKPHVVGTNCDQ--CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
G C C+ G C + C G Y G C+ C CDP SL+ C P+ G+C C+PG
Sbjct: 330 GACLCEHGFTGDRCTERLCPDGRY----GLSCQEPCTCDPEHSLS--CHPMHGECSCQPG 383
Query: 147 VTGTRC-ELCQPNHYGFSLDGCKP-CMC 172
G C E C + +G GC+ C+C
Sbjct: 384 WAGLHCNESCPQDTHG---PGCQEHCLC 408
Score = 166 (63.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 53/159 (33%), Positives = 66/159 (41%)
Query: 37 CIYNTGGPQCDTCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG C TC PG+ G L PKG E C + + + CD + GQC
Sbjct: 500 CSPQTGA--C-TCTPGWHGAHCQLPCPKGQFGEGCA----SVCDCD-HSDGCDPVHGQCR 551
Query: 94 CKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+ +GT C C G + G C + C C G TC G C+C PG G
Sbjct: 552 CQAGWMGTRCHLPCPEGFW----GANCSNTCTCKNGG----TCVSENGNCVCAPGFRGPS 603
Query: 152 CEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C+ C P YG C C C+ +N C PS G C
Sbjct: 604 CQRPCPPGRYG---KRCVQCKCN---NNHSSCHPSDGTC 636
Score = 164 (62.8 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 43/109 (39%), Positives = 49/109 (44%)
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
VC TG C+C P G +C C G + GEGC S CDCD CDP+ GQC
Sbjct: 499 VCSPQTGACTCTPGWHGAHCQLPCPKGQF----GEGCASVCDCDHSDG----CDPVHGQC 550
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCK-PCMCDPIGSNSLQC-DPSGQC 188
C+ G GTRC L P GF C C C N C +G C
Sbjct: 551 RCQAGWMGTRCHLPCPE--GFWGANCSNTCTC----KNGGTCVSENGNC 593
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/158 (31%), Positives = 65/158 (41%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT--PVCDQLTGQCSC 94
C+ G C C PG+ G + P C P + Y ++ + C G CSC
Sbjct: 586 CVSENGN--C-VCAPGFRGPSCQRP---CPPGR-YGKRCVQCKCNNNHSSCHPSDGTCSC 638
Query: 95 KPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
G +C + C GH+ G C C C G TC P G C+C PG TG C
Sbjct: 639 LAGWTGPDCSEACPPGHW----GLKCSQLCQCHHGG----TCHPQDGSCICTPGWTGPNC 690
Query: 153 -ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
E C P +G + + C CD +G C P +G C
Sbjct: 691 LEGCPPRMFGVNCS--QLCQCD-LGE---MCHPETGAC 722
Score = 150 (57.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/152 (33%), Positives = 61/152 (40%)
Query: 45 QCDTCLPGYFGDALALPKGDCEPCQCYIPGTL--ETETF-----TPVCDQLTGQCSCKPH 97
QC C PG+ G GDC +C PG + + F CD +G C C
Sbjct: 117 QCQ-CAPGWRG-------GDCSS-EC-APGMWGPQCDKFCHCGNNSSCDPKSGTCFCPSG 166
Query: 98 VVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-C 155
+ NC Q C GHY G C+ DC G+ +CDP G C C PG G C + C
Sbjct: 167 LQPPNCLQPCPAGHY----GPACQF-DCQCYGA---SCDPQDGACFCPPGRAGPSCNVPC 218
Query: 156 QPNHYGFSLDGCKPCMCD--PIGSN-SLQCDP 184
GF PC P GS S C P
Sbjct: 219 SQGTDGFFCPRTYPCQNGGVPQGSQGSCSCPP 250
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 42/136 (30%), Positives = 54/136 (39%)
Query: 34 CLKCIYNTGGPQCD------TCLPGYFGD--ALALPKGD----CEP-CQCYIPGTLETET 80
C++C N C +CL G+ G + A P G C CQC+ GT
Sbjct: 617 CVQCKCNNNHSSCHPSDGTCSCLAGWTGPDCSEACPPGHWGLKCSQLCQCHHGGT----- 671
Query: 81 FTPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPIT 138
C G C C P G NC + C + G C C CD L C P T
Sbjct: 672 ----CHPQDGSCICTPGWTGPNCLEGCPPRMF----GVNCSQLCQCD----LGEMCHPET 719
Query: 139 GQCLCRPGVTGTRCEL 154
G C+C PG +G C++
Sbjct: 720 GACVCPPGHSGADCKM 735
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 55/189 (29%), Positives = 71/189 (37%)
Query: 32 GDCL-KCIYNTGGPQCD---------TCLP--GYFGDALALPKGDC-EPCQC--YIPGT- 75
GDC +C GPQCD +C P G L +C +PC Y P
Sbjct: 127 GDCSSECAPGMWGPQCDKFCHCGNNSSCDPKSGTCFCPSGLQPPNCLQPCPAGHYGPACQ 186
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRT 133
+ + + CD G C C P G +C+ C G G C ++ C G +
Sbjct: 187 FDCQCYGASCDPQDGACFCPPGRAGPSCNVPCSQG----TDGFFCPRTYPCQNGGVPQGS 242
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC--- 188
G C C PG G C L P GF C + C C N CD +GQC
Sbjct: 243 ----QGSCSCPPGWMGVICSLPCPE--GFHGPNCTQECRCH----NGGLCDRFTGQCHCA 292
Query: 189 PGVFMNRAE 197
PG +R +
Sbjct: 293 PGYIGDRCQ 301
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 239 (89.2 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 58/174 (33%), Positives = 81/174 (46%)
Query: 28 AGTTGDCLKCIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGTLETETFTP 83
A T C C +NT GP+C+ C P YF G A +C+ CQC G F
Sbjct: 455 AKLTMTCA-CKHNTAGPECERCKPFYFDRPWGRATDNDANECKMCQCN--GHARRCRFNL 511
Query: 84 VCDQLTGQCS------CKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNR 132
+L+G+ S C+ G C C G+Y + + CK CDC PVGS +
Sbjct: 512 ELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGK 571
Query: 133 TCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
TC+ ++GQC C+ GVTG C C Y + PC+ P +N +Q + +G
Sbjct: 572 TCNHLSGQCPCKEGVTGLTCNRCARG-YQQTRSHVAPCIKVPTNANMIQAESAG 624
>RGD|1305653 [details] [associations]
symbol:Pear1 "platelet endothelial aggregation receptor 1"
species:10116 "Rattus norvegicus" [GO:0001891 "phagocytic cup"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA;ISO] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
RGD:1305653 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 OMA:PPGTWGF
IPI:IPI00914278 Ensembl:ENSRNOT00000019502 UCSC:RGD:1305653
ArrayExpress:E9PTZ1 Uniprot:E9PTZ1
Length = 1033
Score = 240 (89.5 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 71/192 (36%), Positives = 94/192 (48%)
Query: 18 GPPSDILKSVAGTTGDCLKCIY---NTGGPQ-----CDTCLPGYFGDALALP--KG---- 63
GP ++ S GT G Y N G PQ C +C PG+ G +LP +G
Sbjct: 211 GPSCNVPCS-QGTDGFFCPRTYPCQNGGVPQGSQGSC-SCPPGWMGVICSLPCPEGFHGP 268
Query: 64 DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-K 120
+C + C+C+ G +CD+ TGQC C P +G C ++C VG + G+ C +
Sbjct: 269 NCTQECRCHNGG---------LCDRFTGQCHCAPGYIGDRCREECPVGRF----GQDCAE 315
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC--ELCQPNHYGFSLDGCK-PCMCDPIGS 177
+CDC P G+ C P G CLC G TG RC LC YG S C+ PC CDP
Sbjct: 316 TCDCAP-GA---RCFPANGACLCEHGFTGDRCTERLCPDGRYGLS---CQDPCTCDP--E 366
Query: 178 NSLQCDPS-GQC 188
+SL C P G+C
Sbjct: 367 HSLSCHPMHGEC 378
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/159 (33%), Positives = 66/159 (41%)
Query: 37 CIYNTGGPQCDTCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG C TC PG+ G L PKG E C + + + CD + G C
Sbjct: 500 CSPQTGA--C-TCTPGWRGVHCQLPCPKGQFGEGCA----SVCDCD-HSDGCDPVHGHCR 551
Query: 94 CKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+ +GT C C G + G C + C C G TC P G C+C PG G
Sbjct: 552 CQAGWMGTRCHLPCPEGFW----GANCSNACTCKNGG----TCVPENGNCVCAPGFRGPS 603
Query: 152 CEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C+ C P YG C PC C+ N C PS G C
Sbjct: 604 CQRPCPPGRYG---KRCVPCKCN----NHSSCHPSDGTC 635
Score = 170 (64.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 53/148 (35%), Positives = 64/148 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C TG QC C PGY GD P G DC E C C PG C
Sbjct: 282 CDRFTG--QCH-CAPGYIGDRCREECPVGRFGQDCAETCDC-APGAR--------CFPAN 329
Query: 90 GQCSCKPHVVGTNCDQ--CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
G C C+ G C + C G Y G C+ C CDP SL+ C P+ G+C C+PG
Sbjct: 330 GACLCEHGFTGDRCTERLCPDGRY----GLSCQDPCTCDPEHSLS--CHPMHGECSCQPG 383
Query: 147 VTGTRC-ELCQPNHYGFSLDGCKP-CMC 172
G C E C + +G GC+ C+C
Sbjct: 384 WAGLHCNESCPQDTHGA---GCQEHCLC 408
Score = 164 (62.8 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 43/109 (39%), Positives = 49/109 (44%)
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
VC TG C+C P G +C C G + GEGC S CDCD CDP+ G C
Sbjct: 499 VCSPQTGACTCTPGWRGVHCQLPCPKGQF----GEGCASVCDCDHSDG----CDPVHGHC 550
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C+ G GTRC L P GF C C C N C P +G C
Sbjct: 551 RCQAGWMGTRCHLPCPE--GFWGANCSNACTC----KNGGTCVPENGNC 593
Score = 145 (56.1 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 47/150 (31%), Positives = 57/150 (38%)
Query: 49 CLPGYFGDA--LALPKG----DCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
C G+ G L P+G +C C C GT C G C C P G
Sbjct: 552 CQAGWMGTRCHLPCPEGFWGANCSNACTCKNGGT---------CVPENGNCVCAPGFRGP 602
Query: 102 NCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
+C + C G Y G+ C C C+ S C P G C C G TG C E C P H
Sbjct: 603 SCQRPCPPGRY----GKRCVPCKCNNHSS----CHPSDGTCSCLAGWTGPDCSESCPPGH 654
Query: 160 YGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
+G +PC C + C P G C
Sbjct: 655 WGLKCS--QPCQCH----HGATCHPQDGSC 678
Score = 145 (56.1 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 51/158 (32%), Positives = 62/158 (39%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTGQCSCK 95
C+ ++G C C PGY G A C P I + + C + G C CK
Sbjct: 414 CLADSG--LC-RCAPGYTGPHCA---NLCPPNTYGINCSSHCSCENAIACSPVDGTCICK 467
Query: 96 PHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
NC C G + G C SC C G C P TG C C PG G C+
Sbjct: 468 EGWQRGNCSVPCPPGTW----GFSCNASCQCAHEG----VCSPQTGACTCTPGWRGVHCQ 519
Query: 154 L-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
L C +G +GC C CD +S CDP G C
Sbjct: 520 LPCPKGQFG---EGCASVCDCD----HSDGCDPVHGHC 550
Score = 141 (54.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 50/159 (31%), Positives = 64/159 (40%)
Query: 36 KCIYNTG-GPQCDTCLPGYFGDALALPKGDCEPC----QCYIPGTLETETFTPVCDQLTG 90
+C++ P C PG+ GD + +C P QC L + CD +G
Sbjct: 106 ECVHGRCVAPNRCQCAPGWRGDDCS---SECAPGMWGPQC---DRLCLCGNSSSCDPRSG 159
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C C + +C Q C GHY G C+ DC G+ +CDP G C C PG TG
Sbjct: 160 VCFCPSGLQPPDCLQPCPDGHY----GPACQF-DCHCYGA---SCDPRDGACFCPPGRTG 211
Query: 150 TRCEL-CQPNHYGFSLDGCKPCMCD--PIGSN-SLQCDP 184
C + C GF PC P GS S C P
Sbjct: 212 PSCNVPCSQGTDGFFCPRTYPCQNGGVPQGSQGSCSCPP 250
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 41/138 (29%), Positives = 62/138 (44%)
Query: 48 TCLPGYFGD--ALALPKGD----C-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
+CL G+ G + + P G C +PCQC+ T C G C C P G
Sbjct: 636 SCLAGWTGPDCSESCPPGHWGLKCSQPCQCHHGAT---------CHPQDGSCVCIPGRTG 686
Query: 101 TNCDQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
NC + G + + G C C CDP G + C P TG C+C PG +G C++ +
Sbjct: 687 PNCSE---GCPSRMFGVNCSQLCQCDP-GEM---CHPETGACVCPPGHSGAHCKV--GDQ 737
Query: 160 YGFSLDGCKPCMCDPIGS 177
F++ P + + +G+
Sbjct: 738 ESFTIMPTSPVIHNSLGA 755
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Query: 84 VCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
VC +G C C P G +C + C Y I C S C C+ ++ C P+ G C
Sbjct: 413 VCLADSGLCRCAPGYTGPHCANLCPPNTYGI----NCSSHCSCE--NAI--ACSPVDGTC 464
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKPC----MCDPIGSNSLQCDP 184
+C+ G C + C P +GFS + C +C P + + C P
Sbjct: 465 ICKEGWQRGNCSVPCPPGTWGFSCNASCQCAHEGVCSP-QTGACTCTP 511
>UNIPROTKB|A6QP76 [details] [associations]
symbol:PEAR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
GO:GO:0043654 HOVERGEN:HBG108333 CTD:375033 eggNOG:NOG320509
OMA:PPGTWGF OrthoDB:EOG451DPW EMBL:DAAA02007120 EMBL:BC149186
IPI:IPI00712923 RefSeq:NP_001094770.1 UniGene:Bt.27046
Ensembl:ENSBTAT00000033952 GeneID:787112 KEGG:bta:787112
InParanoid:A6QP76 NextBio:20928268 Uniprot:A6QP76
Length = 1040
Score = 238 (88.8 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 61/164 (37%), Positives = 83/164 (50%)
Query: 38 IYNTGGPQCDTCLPGYFGDALALP--KG----DC-EPCQCYIPGTLETETFTPVCDQLTG 90
++ C +C PG+ G +LP +G +C + C+C+ G +CD+ TG
Sbjct: 240 VFQASQDSC-SCPPGWTGTICSLPCPEGFHGPNCSQECRCHNGG---------LCDRFTG 289
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
QC C P G C ++C VG + G+ C ++CDC P G+ C P G CLC G T
Sbjct: 290 QCRCAPGYTGDRCREECPVGRF----GQDCAETCDCAP-GA---RCFPANGACLCEHGFT 341
Query: 149 GTRC--ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
G RC LC YG S C+ PC CDP +SL C P SG+C
Sbjct: 342 GDRCAERLCPDGLYGLS---CQVPCTCDP--EHSLSCHPMSGEC 380
Score = 183 (69.5 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 57/170 (33%), Positives = 69/170 (40%)
Query: 29 GTTGDCLKCIYNTG-GPQCD--TCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFT 82
G C +C + PQ TC PG+ G L PKG E C + +
Sbjct: 489 GCNASC-QCAHEAACSPQTGACTCTPGWHGTNCQLPCPKGQFGEGCA----SRCDCD-HA 542
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQ 140
CD + G C C+ GT C Q C G + G C + C C G TC P G
Sbjct: 543 DGCDPVHGHCQCQAGWTGTRCHQPCPEGFW----GANCSNACACRNGG----TCIPKNGN 594
Query: 141 CLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C+C PG G C+ CQP YG C PC C +N C PS G C
Sbjct: 595 CVCAPGFRGPFCQKSCQPGRYG---KRCVPCKC----ANHSSCHPSNGTC 637
Score = 175 (66.7 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 54/168 (32%), Positives = 74/168 (44%)
Query: 31 TGDCL---KCIYNTGGPQCDTCLPGYFGDALA---LPKGDCEPCQCYIPGTLETETFTPV 84
T DC +C G C C G+ GD A P G C +P T + E +
Sbjct: 318 TCDCAPGARCFPANGA--C-LCEHGFTGDRCAERLCPDG-LYGLSCQVPCTCDPE-HSLS 372
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
C ++G+CSC P G +C++ C + G GC+ C C G C P +G C
Sbjct: 373 CHPMSGECSCLPGWAGLHCNESCPQDTH----GPGCQEHCLCLHGG----VCQPDSGLCR 424
Query: 143 CRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C PG TG C LC P+ YG + + C C+ N++ C P G C
Sbjct: 425 CAPGYTGPHCASLCPPDTYGVNCS--QRCSCE----NAIACSPIDGTC 466
Score = 155 (59.6 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 51/153 (33%), Positives = 66/153 (43%)
Query: 45 QCDTCLPGYFGD--ALALPKG----DCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
QC C+ + GD + A G C+ PC C G + CD +G CSC
Sbjct: 119 QCQ-CVQDWRGDDCSSACAPGVWGPKCDKPCNC---GNSSS------CDPKSGACSCPSG 168
Query: 98 VVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL- 154
+ +C Q C G Y G C+ SC C G+ C+P TG CLC P TG CE+
Sbjct: 169 LQPPHCLQPCSPGLY----GPACQFSCQCH--GA---PCNPQTGACLCPPERTGPTCEVS 219
Query: 155 CQPNHYGFSLDGCKPCMCDPI---GSNSLQCDP 184
C P+ GFS PC + +S C P
Sbjct: 220 CSPSSVGFSCPSTPPCQNGGVFQASQDSCSCPP 252
Score = 136 (52.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 47/160 (29%), Positives = 67/160 (41%)
Query: 35 LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE--TETFTPVCDQLTGQC 92
L C +G +C +CLPG+ G L + P + PG E VC +G C
Sbjct: 371 LSCHPMSG--EC-SCLPGWAG----LHCNESCPQDTHGPGCQEHCLCLHGGVCQPDSGLC 423
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P G +C C Y + + C SC+ ++ C PI G C+C+ G
Sbjct: 424 RCAPGYTGPHCASLCPPDTYGVNCSQRC-SCE----NAI--ACSPIDGTCVCKEGWQRGN 476
Query: 152 CEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C + C P +GF GC C C ++ C P +G C
Sbjct: 477 CSVPCPPGTWGF---GCNASCQC----AHEAACSPQTGAC 509
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 34/107 (31%), Positives = 45/107 (42%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C G C C P G C + C+ G Y G+ C C C + + +C P G C C
Sbjct: 588 CIPKNGNCVCAPGFRGPFCQKSCQPGRY----GKRCVPCKC----ANHSSCHPSNGTCYC 639
Query: 144 RPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
G TG C + C H+G + + C C G+ Q D S CP
Sbjct: 640 LAGWTGPDCSQPCPLGHWGANC--AQLCQCRHGGTCHPQ-DGSCFCP 683
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 58/171 (33%), Positives = 81/171 (47%)
Query: 37 CIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT G +C+ C P ++ G A A C C C + E F ++
Sbjct: 312 CKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSG 371
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIIS-----GEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G NC C+ G S + CKSC C PVGSL ++C+ +GQC+C
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSSGQCVC 431
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCM-----CDPIGSN-SLQCDPSGQC 188
+PGVTGT C C Y S PC+ D IGS+ S + D +C
Sbjct: 432 KPGVTGTTCNRCAKG-YQQSRSTVTPCIKIPTKADFIGSSHSEEQDQCSKC 481
Score = 164 (62.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C PG+ D +LP + C+ C C+ G+L C+Q
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGFVRDT-SLPMTHRKACKSCGCHPVGSLGKS-----CNQS 425
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
+GQC CKP V GT C++C G+
Sbjct: 426 SGQCVCKPGVTGTTCNRCAKGY 447
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 58/171 (33%), Positives = 81/171 (47%)
Query: 37 CIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT G +C+ C P ++ G A A C C C + E F ++
Sbjct: 312 CKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSG 371
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIIS-----GEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G NC C+ G S + CKSC C PVGSL ++C+ +GQC+C
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSSGQCVC 431
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCM-----CDPIGSN-SLQCDPSGQC 188
+PGVTGT C C Y S PC+ D IGS+ S + D +C
Sbjct: 432 KPGVTGTTCNRCAKG-YQQSRSTVTPCIKIPTKADFIGSSHSEEQDQCSKC 481
Score = 164 (62.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C PG+ D +LP + C+ C C+ G+L C+Q
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGFVRDT-SLPMTHRKACKSCGCHPVGSLGKS-----CNQS 425
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
+GQC CKP V GT C++C G+
Sbjct: 426 SGQCVCKPGVTGTTCNRCAKGY 447
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 50/152 (32%), Positives = 72/152 (47%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 305 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 364
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G+Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 365 GVCLNCRHNTAGRHCHYCKEGYYRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 424
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+ GVTG C C Y S PC+ P+
Sbjct: 425 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPV 455
Score = 148 (57.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 31/82 (37%), Positives = 40/82 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C GY+ D L P + C+ C C+ G C+Q
Sbjct: 365 GVCLNCRHNTAGRHCHYCKEGYYRD-LGKPITHRKACKACDCHPVGAAGK-----TCNQT 418
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 419 TGQCPCKDGVTGITCNRCAKGY 440
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 50/152 (32%), Positives = 72/152 (47%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G+Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPV 456
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/82 (36%), Positives = 40/82 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C GY+ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYYRD-MGKPITHRKACKACDCHPVGAAGK-----TCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 50/152 (32%), Positives = 72/152 (47%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G+Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPV 456
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/82 (36%), Positives = 40/82 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C GY+ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYYRD-MGKPITHRKACKACDCHPVGAAGK-----TCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/166 (30%), Positives = 74/166 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 35 CKHNTEGPECDRCKPFHYDRPWQRASAREANECLACNCNLHARRCRFNMELYKLSGRKSG 94
Query: 90 GQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y +I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 95 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQCPC 154
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQ-CDPSGQC 188
+ GVTG C C + S PC+ + + C C
Sbjct: 155 KDGVTGLTCNRCAKG-FQQSRSPVAPCISESCARTTCTLCSSPADC 199
Score = 140 (54.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 36/119 (30%), Positives = 47/119 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALA--LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
G CL C +NT G C C G++ D + C+ C C+ G C+Q T
Sbjct: 95 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGK-----TCNQTT 149
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIIS------GEGCK--SCD-CDPVGSLNRTCDPITG 139
GQC CK V G C++C G S E C +C C + C P G
Sbjct: 150 GQCPCKDGVTGLTCNRCAKGFQQSRSPVAPCISESCARTTCTLCSSPADCDSYCKPAKG 208
>UNIPROTKB|F1Q2Z6 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043113 "receptor clustering" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043236 "laminin
binding" evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine
receptor signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 CTD:375790 KO:K06254 GO:GO:0030548 GO:GO:2000541
GO:GO:0032314 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497
GeneTree:ENSGT00530000063501 GO:GO:0008582 EMBL:AAEX03003837
EMBL:AAEX03003838 RefSeq:XP_536713.3 Ensembl:ENSCAFT00000030741
GeneID:479574 KEGG:cfa:479574 Uniprot:F1Q2Z6
Length = 2046
Score = 240 (89.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 52/155 (33%), Positives = 72/155 (46%)
Query: 44 PQCDTCLPGYFGDALALPKG----DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHV 98
P C G D + +G C CQC G+ ++ CD TGQCSC+P V
Sbjct: 766 PHCTQTPYGCCQDNVTAARGVGLAGCPSSCQCNPHGS-----YSGTCDPTTGQCSCRPGV 820
Query: 99 VGTNCDQCEVGHYN----IISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
G CD+CE G +N + G GC C CDP G++ C+ +TG C C+PGV G +C
Sbjct: 821 GGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGVAGPKCG 880
Query: 154 LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C P+ + GC+ P + C+ C
Sbjct: 881 QC-PDGHALGPGGCETDSLAPETCAEMHCEFGASC 914
Score = 226 (84.6 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 54/152 (35%), Positives = 71/152 (46%)
Query: 54 FGDALALPKGDCEPC-QCYIP--GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGH 110
+G L K CE + Y+ G T P+ + C+ P+ C Q V
Sbjct: 727 YGTECELKKARCESRRELYVTAQGACRGPTLAPLLPAVPPHCTQTPY----GCCQDNVTA 782
Query: 111 YNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF------S 163
+ GC SC C+P GS + TCDP TGQC CRPGV G +C+ C+P + F
Sbjct: 783 ARGVGLAGCPSSCQCNPHGSYSGTCDPTTGQCSCRPGVGGLKCDRCEPGFWNFRGIVTDG 842
Query: 164 LDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
GC PC CDP G+ C+ +G C PGV
Sbjct: 843 RSGCTPCSCDPRGAVRDDCEQMTGLCSCKPGV 874
Score = 179 (68.1 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 47/148 (31%), Positives = 62/148 (41%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGY--FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
TTG C C GG +CD C PG+ F + + C PC C G + + C+Q
Sbjct: 810 TTGQC-SCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRDD-----CEQ 863
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
+TG CSCKP V G C QC GH + GC++ P C+ C+ G
Sbjct: 864 MTGLCSCKPGVAGPKCGQCPDGH--ALGPGGCETDSLAPETCAEMHCE-FGASCVEEAG- 919
Query: 148 TGTRCELCQPNHYGFSLDGCKPCMCDPI 175
RC +C P K C D +
Sbjct: 920 -SARC-VC-PTSTCPGASATKVCGSDGV 944
>MGI|MGI:87961 [details] [associations]
symbol:Agrn "agrin" species:10090 "Mus musculus" [GO:0001932
"regulation of protein phosphorylation" evidence=ISO] [GO:0001934
"positive regulation of protein phosphorylation" evidence=IDA]
[GO:0002162 "dystroglycan binding" evidence=ISO] [GO:0005509
"calcium ion binding" evidence=ISO] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005615 "extracellular space" evidence=IDA;TAS] [GO:0007009
"plasma membrane organization" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007416 "synapse
assembly" evidence=ISO] [GO:0007528 "neuromuscular junction
development" evidence=IGI] [GO:0008582 "regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0010469 "regulation of receptor
activity" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030548 "acetylcholine receptor regulator
activity" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0032314 "regulation of Rac GTPase activity"
evidence=IDA] [GO:0032321 "positive regulation of Rho GTPase
activity" evidence=ISO] [GO:0043113 "receptor clustering"
evidence=IGI;ISO;IMP;IDA] [GO:0043525 "positive regulation of
neuron apoptotic process" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=IDA] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=ISO] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=IMP] Reactome:REACT_112621
InterPro:IPR000742 InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181
SMART:SM00280 MGI:MGI:87961 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045887 GO:GO:0045944
GO:GO:0007009 GO:GO:0045202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416 GO:GO:0005605
GO:GO:0043113 PROSITE:PS01186 Reactome:REACT_118324 GO:GO:0033691
GO:GO:0002162 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 GO:GO:0030548 GO:GO:0035374 GO:GO:0043395
GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
OMA:TNRWLRV GO:GO:0005796 GO:GO:0045213 GO:GO:0001934
InterPro:IPR011497 EMBL:AL928667 EMBL:BC150703 IPI:IPI00378698
IPI:IPI00648938 IPI:IPI00874558 UniGene:Mm.273098 PDB:3PVE
PDBsum:3PVE ProteinModelPortal:A2ASQ1 SMR:A2ASQ1 STRING:A2ASQ1
PaxDb:A2ASQ1 PRIDE:A2ASQ1 Ensembl:ENSMUST00000071248
Ensembl:ENSMUST00000075787 Ensembl:ENSMUST00000105574
Ensembl:ENSMUST00000105575 UCSC:uc008wgf.1
GeneTree:ENSGT00530000063501 InParanoid:A2ASQ1
Reactome:REACT_115433 ChiTaRS:AGRN EvolutionaryTrace:A2ASQ1
Bgee:A2ASQ1 Genevestigator:A2ASQ1 Uniprot:A2ASQ1
Length = 1950
Score = 239 (89.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 54/167 (32%), Positives = 75/167 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKG----DC-EPCQCYIPGTLETETFTPVCD 86
G L + P C G D + +G C C C G+ ++ CD
Sbjct: 647 GPTLAPLLPMASPHCAQTPYGCCQDNVTAAQGVGLAGCPSTCHCNPHGS-----YSGTCD 701
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYN----IISGE-GCKSCDCDPVGSLNRTCDPITGQC 141
+TGQCSC+P V G CD+CE G +N + G GC C CDP G++ C+ +TG C
Sbjct: 702 PVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLC 761
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
CRPGV G +C C P+ GC+ P+ + C+ C
Sbjct: 762 SCRPGVAGPKCGQC-PDGQALGHLGCEADPTTPVTCVEMHCEFGASC 807
Score = 230 (86.0 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 57/146 (39%), Positives = 71/146 (48%)
Query: 60 LPKGDCEPCQ-CYIP--GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG 116
L K CE Q Y+ G T P+ + C+ P+ C Q V +
Sbjct: 626 LKKARCEARQELYVAAQGACRGPTLAPLLPMASPHCAQTPY----GCCQDNVTAAQGVGL 681
Query: 117 EGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQP---NHYGFSLDG---CKP 169
GC S C C+P GS + TCDP+TGQC CRPGV G RC+ C+P N G DG C P
Sbjct: 682 AGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTP 741
Query: 170 CMCDPIGSNSLQCDP-SGQC---PGV 191
C CDP G+ C+ +G C PGV
Sbjct: 742 CSCDPRGAVRDDCEQMTGLCSCRPGV 767
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 52/158 (32%), Positives = 74/158 (46%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 38 CKHNTEGPECDRCKPFHYDRPWQRASAREANECLACNCNLHARRCRFNMELYKLSGRKSG 97
Query: 90 GQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y +I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 98 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQCPC 157
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDP-IGSNSL 180
+ GVTG C C + S PC+ P I SL
Sbjct: 158 KDGVTGLTCNRCAKG-FQQSRSPVAPCIKIPAINPTSL 194
Score = 142 (55.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 36/118 (30%), Positives = 48/118 (40%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALA--LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
G CL C +NT G C C G++ D + C+ C C+ G C+Q T
Sbjct: 98 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGK-----TCNQTT 152
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEG-C-KSCDCDPVGSLNRTCDPITGQCLCRP 145
GQC CK V G C++C G S C K +P + T P C+P
Sbjct: 153 GQCPCKDGVTGLTCNRCAKGFQQSRSPVAPCIKIPAINPTSLVTSTEAPADCDSYCKP 210
>UNIPROTKB|Q5VY43 [details] [associations]
symbol:PEAR1 "Platelet endothelial aggregation receptor 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0043654 "recognition of apoptotic cell" evidence=IEA]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 EMBL:AL356104 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 EMBL:AL158169 HOVERGEN:HBG108333
EMBL:AK074121 IPI:IPI00154858 RefSeq:NP_001073940.1
UniGene:Hs.142003 HSSP:P01133 ProteinModelPortal:Q5VY43 SMR:Q5VY43
IntAct:Q5VY43 STRING:Q5VY43 PhosphoSite:Q5VY43 DMDM:74757035
PRIDE:Q5VY43 DNASU:375033 Ensembl:ENST00000292357
Ensembl:ENST00000338302 GeneID:375033 KEGG:hsa:375033
UCSC:uc001fqj.1 CTD:375033 GeneCards:GC01P156865 H-InvDB:HIX0001178
HGNC:HGNC:33631 HPA:HPA035217 MIM:610278 neXtProt:NX_Q5VY43
PharmGKB:PA162399233 eggNOG:NOG320509 InParanoid:Q5VY43 OMA:PPGTWGF
OrthoDB:EOG451DPW GenomeRNAi:375033 NextBio:100378
ArrayExpress:Q5VY43 Bgee:Q5VY43 CleanEx:HS_PEAR1
Genevestigator:Q5VY43 Uniprot:Q5VY43
Length = 1037
Score = 235 (87.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 68/191 (35%), Positives = 92/191 (48%)
Query: 18 GPPSDILKSVAGTTGDCLKCIYN--TGG----PQ--CDTCLPGYFGDALALP--KG---- 63
GP D+ S GT+G ++ GG PQ C +C PG+ G +LP +G
Sbjct: 213 GPSCDVSCS-QGTSGFFCPSTHSCQNGGVFQTPQGSC-SCPPGWMGTICSLPCPEGFHGP 270
Query: 64 DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-K 120
+C + C+C+ G +CD+ TGQC C P G C ++C VG + G+ C +
Sbjct: 271 NCSQECRCHNGG---------LCDRFTGQCRCAPGYTGDRCREECPVGRF----GQDCAE 317
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC--ELCQPNHYGFSLDGCKPCMCDPIGSN 178
+CDC P + C P G CLC G TG RC LC YG S PC CD +
Sbjct: 318 TCDCAP----DARCFPANGACLCEHGFTGDRCTDRLCPDGFYGLSCQA--PCTCDR--EH 369
Query: 179 SLQCDP-SGQC 188
SL C P +G+C
Sbjct: 370 SLSCHPMNGEC 380
Score = 170 (64.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 54/159 (33%), Positives = 67/159 (42%)
Query: 37 CIYNTGGPQCDTCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG C TC PG+ G L PKG E C + + + CD + G+C
Sbjct: 502 CSPQTGA--C-TCTPGWHGAHCQLPCPKGQFGEGCA----SRCDCD-HSDGCDPVHGRCQ 553
Query: 94 CKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+ +G C C G + G C + C C G TC P G C+C PG G
Sbjct: 554 CQAGWMGARCHLSCPEGLW----GVNCSNTCTCKNGG----TCLPENGNCVCAPGFRGPS 605
Query: 152 CEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C+ CQP YG C PC C +N C PS G C
Sbjct: 606 CQRSCQPGRYG---KRCVPCKC----ANHSFCHPSNGTC 637
Score = 157 (60.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 40/109 (36%), Positives = 49/109 (44%)
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
VC TG C+C P G +C C G + GEGC S CDCD CDP+ G+C
Sbjct: 501 VCSPQTGACTCTPGWHGAHCQLPCPKGQF----GEGCASRCDCDHSDG----CDPVHGRC 552
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ G G RC L C +G + C C N C P +G C
Sbjct: 553 QCQAGWMGARCHLSCPEGLWGVNCSNT--CTC----KNGGTCLPENGNC 595
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 50/160 (31%), Positives = 68/160 (42%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQ----CYIPGTLETETFTPVCDQLTGQC 92
C+ G C C PG+ G + + C+P + C +P +F C G C
Sbjct: 588 CLPENGN--C-VCAPGFRGPSC---QRSCQPGRYGKRC-VPCKCANHSF---CHPSNGTC 637
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C G +C Q C GH+ GE C ++C C G TC P G C+C G TG
Sbjct: 638 YCLAGWTGPDCSQPCPPGHW----GENCAQTCQCHHGG----TCHPQDGSCICPLGWTGH 689
Query: 151 RC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C E C +G + +PC C P G +C P +G C
Sbjct: 690 HCLEGCPLGTFGANCS--QPCQCGP-GE---KCHPETGAC 723
Score = 151 (58.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/148 (35%), Positives = 63/148 (42%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C TG QC C PGY GD P G DC E C C P C
Sbjct: 284 CDRFTG--QC-RCAPGYTGDRCREECPVGRFGQDCAETCDC-APDAR--------CFPAN 331
Query: 90 GQCSCKPHVVGTNC-DQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
G C C+ G C D+ C G Y G C++ C CD SL+ C P+ G+C C PG
Sbjct: 332 GACLCEHGFTGDRCTDRLCPDGFY----GLSCQAPCTCDREHSLS--CHPMNGECSCLPG 385
Query: 147 VTGTRC-ELCQPNHYGFSLDGCKP-CMC 172
G C E C + +G GC+ C+C
Sbjct: 386 WAGLHCNESCPQDTHG---PGCQEHCLC 410
Score = 149 (57.5 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 55/171 (32%), Positives = 67/171 (39%)
Query: 29 GTTGDCLKCIYN-----TGGPQCDTCLPGYFGDALA-LPKGDCEPCQCYIPGTLETETFT 82
G CL C++ T G C C PGY G A L D C + E
Sbjct: 403 GCQEHCL-CLHGGVCQATSG-LCQ-CAPGYTGPHCASLCPPDTYGVNCSARCSCENAI-- 457
Query: 83 PVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQ 140
C + G+C CK NC C G + G C SC C + C P TG
Sbjct: 458 -ACSPIDGECVCKEGWQRGNCSVPCPPGTW----GFSCNASCQC----AHEAVCSPQTGA 508
Query: 141 CLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C C PG G C+L C +G +GC C CD +S CDP G+C
Sbjct: 509 CTCTPGWHGAHCQLPCPKGQFG---EGCASRCDCD----HSDGCDPVHGRC 552
Score = 139 (54.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 48/155 (30%), Positives = 64/155 (41%)
Query: 45 QCDTCLPGYFGDA--LALPKG----DCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
+C C G+ G L+ P+G +C C C GT C G C C P
Sbjct: 551 RCQ-CQAGWMGARCHLSCPEGLWGVNCSNTCTCKNGGT---------CLPENGNCVCAPG 600
Query: 98 VVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELC 155
G +C + C+ G Y G+ C C C + + C P G C C G TG C + C
Sbjct: 601 FRGPSCQRSCQPGRY----GKRCVPCKC----ANHSFCHPSNGTCYCLAGWTGPDCSQPC 652
Query: 156 QPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQCP 189
P H+G + C + C C G+ Q D S CP
Sbjct: 653 PPGHWG---ENCAQTCQCHHGGTCHPQ-DGSCICP 683
Score = 138 (53.6 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 62/193 (32%), Positives = 73/193 (37%)
Query: 16 CVGPPSDILKSVAGTTGD-CL-KCIYNTGGPQCD---------TCLP--GYFGDALALPK 62
CV P + V G GD C +C GPQCD +C P G L
Sbjct: 114 CVAPNQ--CQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQP 171
Query: 63 GDC-EPCQ--CYIPGT-LETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGE 117
+C +PC Y P + CD TG C C G +CD C G SG
Sbjct: 172 PNCLQPCTPGYYGPACQFRCQCHGAPCDPQTGACFCPAERTGPSCDVSCSQG----TSGF 227
Query: 118 GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIG 176
C S G + +T P G C C PG GT C L P GF C + C C
Sbjct: 228 FCPSTHSCQNGGVFQT--P-QGSCSCPPGWMGTICSLPCPE--GFHGPNCSQECRCH--- 279
Query: 177 SNSLQCDP-SGQC 188
N CD +GQC
Sbjct: 280 -NGGLCDRFTGQC 291
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 35/115 (30%), Positives = 47/115 (40%)
Query: 49 CLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
CL G+ G + P G +C + CQC+ GT C G C C G
Sbjct: 639 CLAGWTGPDCSQPCPPGHWGENCAQTCQCHHGGT---------CHPQDGSCICPLGWTGH 689
Query: 102 NC-DQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL 154
+C + C +G + G C C C P C P TG C+C PG +G C +
Sbjct: 690 HCLEGCPLGTF----GANCSQPCQCGP----GEKCHPETGACVCPPGHSGAPCRI 736
>UNIPROTKB|F1RHK7 [details] [associations]
symbol:PEAR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043654 "recognition of apoptotic cell" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 CTD:375033 OMA:PPGTWGF
EMBL:CU151867 RefSeq:XP_001929552.1 UniGene:Ssc.28869
Ensembl:ENSSSCT00000007080 GeneID:100156908 KEGG:ssc:100156908
Uniprot:F1RHK7
Length = 1038
Score = 235 (87.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 60/164 (36%), Positives = 82/164 (50%)
Query: 38 IYNTGGPQCDTCLPGYFGDALALP--KG----DC-EPCQCYIPGTLETETFTPVCDQLTG 90
++ C +C PG+ G +LP +G +C + C+C+ G +CD+ TG
Sbjct: 240 VFQASQGSC-SCPPGWMGTICSLPCPEGFHGPNCSQECRCHNGG---------LCDRFTG 289
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
QC C P G C ++C VG++ G+ C + CDC P G+ C P G CLC G T
Sbjct: 290 QCRCAPGYTGDRCREECPVGYF----GQDCAEMCDCAP-GA---RCFPANGACLCEHGFT 341
Query: 149 GTRC--ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
G RC LC YG S C+ PC CDP +S C P SG+C
Sbjct: 342 GDRCAERLCPDGLYGLS---CQVPCTCDP--EHSFSCHPMSGEC 380
Score = 181 (68.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 55/159 (34%), Positives = 68/159 (42%)
Query: 37 CIYNTGGPQCDTCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG C TC PG+ G L PKG E C + + + + CD + G+C
Sbjct: 502 CSPQTGA--C-TCTPGWHGAHCQLPCPKGQFGEGCASHC----DCD-HSDGCDPVHGRCH 553
Query: 94 CKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+ GT C C G + G C + C C G TC P G C+C PG G
Sbjct: 554 CQAGWTGTRCHLPCPEGFW----GTNCSNTCTCKNGG----TCIPENGNCVCAPGFRGPS 605
Query: 152 CEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C+ CQP YG C PC C +N C PS G C
Sbjct: 606 CQRPCQPGRYG---KRCVPCKC----ANHSSCHPSNGTC 637
Score = 175 (66.7 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 54/167 (32%), Positives = 74/167 (44%)
Query: 33 DCL---KCIYNTGGPQCDTCLPGYFGDALA---LPKGDCEPCQCYIPGTLETE-TFTPVC 85
DC +C G C C G+ GD A P G C +P T + E +F+ C
Sbjct: 320 DCAPGARCFPANGA--C-LCEHGFTGDRCAERLCPDG-LYGLSCQVPCTCDPEHSFS--C 373
Query: 86 DQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLC 143
++G+CSC P G +C++ C + G GC+ C C G C P +G C C
Sbjct: 374 HPMSGECSCLPGWAGLHCNESCPQDTH----GPGCQEHCLCLHGG----VCQPDSGLCRC 425
Query: 144 RPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
PG TG C LC P+ YG + C C+ N++ C P G C
Sbjct: 426 APGYTGPHCASLCPPDSYGVNCSS--RCSCE----NAIACSPVDGAC 466
Score = 159 (61.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/131 (35%), Positives = 57/131 (43%)
Query: 45 QCDTCLPGYFGD--ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
QC C+ + GD + A G P QC P + CD +G CSC P + +
Sbjct: 119 QCQ-CVQDWRGDDCSSACAPGVWGP-QCDKPCNCGNSSS---CDPKSGACSCPPGLQPPH 173
Query: 103 CDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNH 159
C Q C G Y G C+ SC C CDP TG CLC P TG CE C +
Sbjct: 174 CLQPCSPGRY----GPACQYSCQCH-----RAPCDPQTGACLCPPERTGPSCEESCSLST 224
Query: 160 YGFSLDGCKPC 170
+GFS PC
Sbjct: 225 FGFSCPSIPPC 235
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/150 (28%), Positives = 63/150 (42%)
Query: 45 QCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE--TETFTPVCDQLTGQCSCKPHVVGTN 102
+C +CLPG+ G L + P + PG E VC +G C C P G +
Sbjct: 379 EC-SCLPGWAG----LHCNESCPQDTHGPGCQEHCLCLHGGVCQPDSGLCRCAPGYTGPH 433
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNH 159
C C Y G C S C C+ ++ C P+ G C+C+ G C + C P
Sbjct: 434 CASLCPPDSY----GVNCSSRCSCE--NAI--ACSPVDGACICKEGWQRGNCSIPCPPGT 485
Query: 160 YGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+GF+ + C C ++ C P +G C
Sbjct: 486 WGFNCNAS--CQC----AHGAACSPQTGAC 509
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 51/174 (29%), Positives = 69/174 (39%)
Query: 29 GTTGDCLKCIYNTG-GP---QCDTCLPGYFGDA--LALPKG----DCE-PCQCYIPGTLE 77
G C C ++ G P +C C G+ G L P+G +C C C GT
Sbjct: 532 GCASHC-DCDHSDGCDPVHGRCH-CQAGWTGTRCHLPCPEGFWGTNCSNTCTCKNGGT-- 587
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
C G C C P G +C + C+ G Y G+ C C C + + +C P
Sbjct: 588 -------CIPENGNCVCAPGFRGPSCQRPCQPGRY----GKRCVPCKC----ANHSSCHP 632
Query: 137 ITGQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
G C C G TG C + C H+G + + C C G+ Q D S CP
Sbjct: 633 SNGTCYCLAGWTGPDCSQPCPLGHWGANC--AQLCQCRHGGTCHPQ-DGSCFCP 683
>UNIPROTKB|F1LXY9 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005605 "basal lamina" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] RGD:1308889 GO:GO:0007411 GO:GO:0042383
GO:GO:0005605 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
IPI:IPI00781912 Ensembl:ENSRNOT00000061512 ArrayExpress:F1LXY9
Uniprot:F1LXY9
Length = 661
Score = 232 (86.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 53/162 (32%), Positives = 77/162 (47%)
Query: 25 KSVAGTTGDCLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTL----- 76
K + G G C+ C +NT G C+TC+ G+F G + + P+ C+PC C G+L
Sbjct: 333 KYIGG--GVCINCTHNTAGINCETCIDGFFRPKGVSPSYPR-PCQPCHCDPAGSLSEVCI 389
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP 136
+ E T G C CKP G NCD+C G+ C+ C+C +GS N+ DP
Sbjct: 390 KDEKHTRR-GLKPGSCYCKPGFGGMNCDRCVRGYRGY---PDCQPCNCSGLGSTNQ--DP 443
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLD---GCKPCMCDPI 175
G C C+ V G C C+ + + GC+ C C +
Sbjct: 444 CIGPCSCKENVEGEDCSHCKFGFFNLQEENQKGCEECFCSGV 485
Score = 152 (58.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNI--ISGE---GCKSCDCDPVGSLNRTC---DPIT-- 138
G C +C + G NC+ C G + +S C+ C CDP GSL+ C + T
Sbjct: 338 GVCINCTHNTAGINCETCIDGFFRPKGVSPSYPRPCQPCHCDPAGSLSEVCIKDEKHTRR 397
Query: 139 ----GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
G C C+PG G C+ C + G+ C+PC C +GS + DP G C
Sbjct: 398 GLKPGSCYCKPGFGGMNCDRCVRGYRGYP--DCQPCNCSGLGSTNQ--DPCIGPC 448
Score = 128 (50.1 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 56/193 (29%), Positives = 78/193 (40%)
Query: 5 VHHVSVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALAL 60
V +SV + +C G A C +C +NT G CD C PG+ + L
Sbjct: 240 VKDISVGGMCICYGHARACPLDPATNKSRC-ECEHNTCGESCDRCCPGFHQKPWRAGTFL 298
Query: 61 PKGDCEPCQCYIPGTLETETF--TPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEG 118
K +CE C C+ G E + T L+ K ++ G C C +N +G
Sbjct: 299 TKTECEACNCH--GKAEECYYDETVASRNLSLNIHGK-YIGGGVCINCT---HNT-AGIN 351
Query: 119 CKSC-D--CDPVG---SLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP--C 170
C++C D P G S R C P C C P G+ E+C + + G KP C
Sbjct: 352 CETCIDGFFRPKGVSPSYPRPCQP----CHCDPA--GSLSEVCIKDEK-HTRRGLKPGSC 404
Query: 171 MCDPIGSNSLQCD 183
C P G + CD
Sbjct: 405 YCKP-GFGGMNCD 416
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 231 (86.4 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 50/153 (32%), Positives = 71/153 (46%)
Query: 36 KCIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQL 88
+C +NT GP+CD C P ++ A +C PC C + E + +
Sbjct: 299 ECKHNTEGPECDRCKPFHYDRPWQRATGKEANECLPCNCNLHARRCRFNMELYKLSGRKS 358
Query: 89 TGQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
G C +C+ + G +C C+ G Y I CK+CDC PVG+ +TC+ TGQC
Sbjct: 359 GGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRACKACDCHPVGAAGKTCNQTTGQCP 418
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
C+ GVTG C C Y S PC+ P+
Sbjct: 419 CKDGVTGITCNRCAKG-YQQSRSPVAPCIKIPV 450
Score = 148 (57.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 36/118 (30%), Positives = 52/118 (44%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGD-ALALP-KGDCEPCQCYIPGTLETETFTPVCDQLT 89
G C+ C +NT G C C G++ D A+ + C+ C C+ G C+Q T
Sbjct: 360 GVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRACKACDCHPVGAAGK-----TCNQTT 414
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEG-C-KSCDCDPVGSLNRTCDPITGQCLCRP 145
GQC CK V G C++C G+ S C K P ++ T +P C+P
Sbjct: 415 GQCPCKDGVTGITCNRCAKGYQQSRSPVAPCIKIPVIKPTAVISTTEEPADCDSYCKP 472
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 49/152 (32%), Positives = 72/152 (47%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G++ I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYFRDLGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGVTCNRCAKG-YQQSRSPIAPCIKIPV 456
Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 32/82 (39%), Positives = 40/82 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C GYF D L P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGYFRD-LGKPITHRKACKACDCHPVGAAGK-----TCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGVTCNRCAKGY 441
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPV 456
Score = 142 (55.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C G++ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRD-MGKPITHRKACKACDCHPVGAAGK-----TCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPV 456
Score = 142 (55.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C G++ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRD-MGKPITHRKACKACDCHPVGAAGK-----TCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 50/152 (32%), Positives = 71/152 (46%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 306 CRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 365
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPC 425
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+ GVTG C C Y S PC+ P+
Sbjct: 426 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIPV 456
Score = 142 (55.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C G++ D + P + C+ C C+ G C+Q
Sbjct: 366 GVCLNCRHNTAGRHCHYCKEGFYRD-MGKPITHRKACKACDCHPVGAAGK-----TCNQT 419
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 420 TGQCPCKDGVTGITCNRCAKGY 441
>UNIPROTKB|I3LGD9 [details] [associations]
symbol:I3LGD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043236 "laminin binding" evidence=IEA] [GO:0043113
"receptor clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV
InterPro:IPR011497 GeneTree:ENSGT00530000063501 EMBL:FP565685
Ensembl:ENSSSCT00000026215 Uniprot:I3LGD9
Length = 2039
Score = 237 (88.5 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 46/126 (36%), Positives = 64/126 (50%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYN----IISGE-GCKSC 122
CQC G+ ++ CD TGQCSC+P V G CD+CE G +N + G GC C
Sbjct: 796 CQCNPHGS-----YSGTCDPATGQCSCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPC 850
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQC 182
CDP G++ C+ +TG C C+PGV G +C C P+ + GC+ P + C
Sbjct: 851 SCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQC-PDGHALGPAGCETDPSAPKTCAEMPC 909
Query: 183 DPSGQC 188
+ C
Sbjct: 910 EFGASC 915
Score = 222 (83.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 60/178 (33%), Positives = 81/178 (45%)
Query: 32 GDCLKCIYNTGG----PQCDTCLPGYFGDALALPKGDCEPCQ-CYI--PGTLETETFTPV 84
G C+ C ++ G P C + Y G L K C+ Q Y+ G + T P
Sbjct: 704 GPCV-CDFSCQGVLRSPVCGSDGVTY-GTECELKKARCDSRQELYVVAQGACRSPTLAPR 761
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLC 143
+ C+ P+ C Q + + GC SC C+P GS + TCDP TGQC C
Sbjct: 762 PPAVPLHCAQAPY----GCCQDNITAARGVGLAGCPSSCQCNPHGSYSGTCDPATGQCSC 817
Query: 144 RPGVTGTRCELCQPNHYGF------SLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
RPGV G +C+ C+P + F GC PC CDP G+ C+ +G C PGV
Sbjct: 818 RPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGV 875
>RGD|2067 [details] [associations]
symbol:Agrn "agrin" species:10116 "Rattus norvegicus" [GO:0001932
"regulation of protein phosphorylation" evidence=IDA] [GO:0001934
"positive regulation of protein phosphorylation" evidence=ISO]
[GO:0002162 "dystroglycan binding" evidence=IDA] [GO:0005509 "calcium
ion binding" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005578 "proteinaceous extracellular matrix"
evidence=TAS] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=ISO;ISS] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007009 "plasma membrane organization"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007416 "synapse assembly" evidence=IMP] [GO:0007528
"neuromuscular junction development" evidence=ISO;TAS] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0010469
"regulation of receptor activity" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030548 "acetylcholine receptor regulator activity" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] [GO:0032314
"regulation of Rac GTPase activity" evidence=ISO] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IDA]
[GO:0033691 "sialic acid binding" evidence=ISS] [GO:0035374
"chondroitin sulfate binding" evidence=ISS] [GO:0043113 "receptor
clustering" evidence=ISO;ISS;IDA] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=ISS] [GO:0043525 "positive regulation
of neuron apoptotic process" evidence=ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045213 "neurotransmitter receptor metabolic
process" evidence=ISO] [GO:0045887 "positive regulation of synaptic
growth at neuromuscular junction" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0051491 "positive regulation of
filopodium assembly" evidence=IDA] [GO:2000541 "positive regulation
of protein geranylgeranylation" evidence=ISO] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00008 Pfam:PF00050 Pfam:PF07648
PROSITE:PS50026 PROSITE:PS51465 SMART:SM00181 SMART:SM00280 RGD:2067
GO:GO:0005615 GO:GO:0009986 GO:GO:0043525 GO:GO:0007528 GO:GO:0045887
GO:GO:0045944 GO:GO:0007009 GO:GO:0045202 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007416
GO:GO:0005605 GO:GO:0043113 PROSITE:PS01186 GO:GO:0033691
GO:GO:0002162 CTD:375790 eggNOG:NOG312635 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 GO:GO:0030548 GO:GO:0035374
GO:GO:0043395 GO:GO:0051491 GO:GO:2000541 GO:GO:0032321 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054 Pfam:PF01390
SMART:SM00180 SMART:SM00274 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0045213 GO:GO:0001934 InterPro:IPR011497 EMBL:M64780
EMBL:S44194 IPI:IPI00188885 IPI:IPI00231249 IPI:IPI00231250
IPI:IPI00231251 IPI:IPI00231252 PIR:JH0399 RefSeq:NP_786930.1
UniGene:Rn.2163 PDB:3V64 PDB:3V65 PDBsum:3V64 PDBsum:3V65
ProteinModelPortal:P25304 SMR:P25304 IntAct:P25304 STRING:P25304
PRIDE:P25304 GeneID:25592 KEGG:rno:25592 InParanoid:P25304
NextBio:607271 ArrayExpress:P25304 Genevestigator:P25304
GermOnline:ENSRNOG00000020205 GO:GO:0001932 Uniprot:P25304
Length = 1959
Score = 236 (88.1 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 50/146 (34%), Positives = 68/146 (46%)
Query: 49 CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
C F A + C C C G+ ++ CD TGQCSC+P V G CD+CE
Sbjct: 668 CCQDNFTAAQGVGLAGCPSTCHCNPHGS-----YSGTCDPATGQCSCRPGVGGLRCDRCE 722
Query: 108 VGHYN----IISGE-GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
G +N + G GC C CDP G++ C+ +TG C CRPGV G +C C P+
Sbjct: 723 PGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQC-PDGQVL 781
Query: 163 SLDGCKPCMCDPIGSNSLQCDPSGQC 188
GC+ P+ + C+ C
Sbjct: 782 GHLGCEADPMTPVTCVEIHCEFGASC 807
Score = 223 (83.6 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 63/177 (35%), Positives = 80/177 (45%)
Query: 32 GDCLKCIYNTGG-PQCDTC-LPGY-FGDALALPKGDCEPCQ-CYIP--GTLETETFTPVC 85
G C+ C ++ P+ C G +G L K CE Q Y+ G T P+
Sbjct: 596 GPCV-CDFSCQSVPRSPVCGSDGVTYGTECDLKKARCESQQELYVAAQGACRGPTLAPLL 654
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCR 144
C+ P+ C Q + GC S C C+P GS + TCDP TGQC CR
Sbjct: 655 PVAFPHCAQTPY----GCCQDNFTAAQGVGLAGCPSTCHCNPHGSYSGTCDPATGQCSCR 710
Query: 145 PGVTGTRCELCQP---NHYGFSLDG---CKPCMCDPIGSNSLQCDP-SGQC---PGV 191
PGV G RC+ C+P N G DG C PC CDP G+ C+ +G C PGV
Sbjct: 711 PGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLCSCRPGV 767
>UNIPROTKB|I3LV27 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 EMBL:CU993814
Ensembl:ENSSSCT00000024191 Uniprot:I3LV27
Length = 1668
Score = 233 (87.1 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 54/149 (36%), Positives = 76/149 (51%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C PGY+ D G C PC C+ G C +G C +C+ + G +C++C+
Sbjct: 59 CSPGYYRDNKGFYTGRCVPCNCH--GHSNR------CKDGSGICINCQHNTAGEHCERCK 110
Query: 108 VGHY-NIISGEGCKSCDCDPVGSLNRTCDPITG---QCLCRPGVTGTRCELCQPNHYGF- 162
G+Y N I G C++C C S C +TG +CLC+PG TGT CE C P ++G
Sbjct: 111 EGYYGNAIHGS-CQACLCPHSNSFATGCI-VTGGNMRCLCKPGYTGTLCERCAPGYFGNP 168
Query: 163 -SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
G C+PC C+ G + CDP +G C
Sbjct: 169 QKFGGSCQPCNCNSNGQ-LVSCDPLTGDC 196
Score = 207 (77.9 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 45/132 (34%), Positives = 69/132 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C GY+G+A+ G C+ C C P + +F C G
Sbjct: 91 SGICINCQHNTAGEHCERCKEGYYGNAI---HGSCQACLC--P---HSNSFATGCIVTGG 142
Query: 91 --QCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCR-P 145
+C CKP GT C++C G++ G C+ C+C+ G L +CDP+TG C+ + P
Sbjct: 143 NMRCLCKPGYTGTLCERCAPGYFGNPQKFGGSCQPCNCNSNGQLV-SCDPLTGDCMNQEP 201
Query: 146 GVTGT--RCELC 155
+G C+ C
Sbjct: 202 KDSGPGEECDDC 213
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C+ P S+ + TG ++C+ G G C+ C PGYFG+ G C+PC C
Sbjct: 125 CLCPHSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFGNPQKFG-GSCQPCNCNSN 183
Query: 74 GTLETETFTPVCDQLTGQC---SCKPHVVGTNCDQCE 107
G L + CD LTG C K G CD C+
Sbjct: 184 GQLVS------CDPLTGDCMNQEPKDSGPGEECDDCD 214
>UNIPROTKB|F1SBB3 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 EMBL:CU993814 Ensembl:ENSSSCT00000004108 OMA:RAANQSS
Uniprot:F1SBB3
Length = 1724
Score = 233 (87.1 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 54/149 (36%), Positives = 76/149 (51%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C PGY+ D G C PC C+ G C +G C +C+ + G +C++C+
Sbjct: 59 CSPGYYRDNKGFYTGRCVPCNCH--GHSNR------CKDGSGICINCQHNTAGEHCERCK 110
Query: 108 VGHY-NIISGEGCKSCDCDPVGSLNRTCDPITG---QCLCRPGVTGTRCELCQPNHYGF- 162
G+Y N I G C++C C S C +TG +CLC+PG TGT CE C P ++G
Sbjct: 111 EGYYGNAIHGS-CQACLCPHSNSFATGCI-VTGGNMRCLCKPGYTGTLCERCAPGYFGNP 168
Query: 163 -SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
G C+PC C+ G + CDP +G C
Sbjct: 169 QKFGGSCQPCNCNSNGQ-LVSCDPLTGDC 196
Score = 207 (77.9 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 45/132 (34%), Positives = 69/132 (52%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C GY+G+A+ G C+ C C P + +F C G
Sbjct: 91 SGICINCQHNTAGEHCERCKEGYYGNAI---HGSCQACLC--P---HSNSFATGCIVTGG 142
Query: 91 --QCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCR-P 145
+C CKP GT C++C G++ G C+ C+C+ G L +CDP+TG C+ + P
Sbjct: 143 NMRCLCKPGYTGTLCERCAPGYFGNPQKFGGSCQPCNCNSNGQLV-SCDPLTGDCMNQEP 201
Query: 146 GVTGT--RCELC 155
+G C+ C
Sbjct: 202 KDSGPGEECDDC 213
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C+ P S+ + TG ++C+ G G C+ C PGYFG+ G C+PC C
Sbjct: 125 CLCPHSNSFATGCIVTGGNMRCLCKPGYTGTLCERCAPGYFGNPQKFG-GSCQPCNCNSN 183
Query: 74 GTLETETFTPVCDQLTGQC---SCKPHVVGTNCDQCE 107
G L + CD LTG C K G CD C+
Sbjct: 184 GQLVS------CDPLTGDCMNQEPKDSGPGEECDDCD 214
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 226 (84.6 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 50/151 (33%), Positives = 70/151 (46%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 308 CKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSG 367
Query: 90 GQC-SCKPHVVGTNCDQCEVGHYNIISG-----EGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y +S + CK CDC PVG+ +TC+ TGQC C
Sbjct: 368 GVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQTTGQCPC 427
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDP 174
+ GVTG C C Y S PC+ P
Sbjct: 428 KDGVTGITCNRCAKG-YQQSRSPIAPCIKIP 457
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALP---KGDCEPCQCYIPGTLETETFTPVCDQL 88
G CL C +NT G C C G++ D L+ P + C+ C C+ G +T C+Q
Sbjct: 368 GVCLNCRHNTAGRHCHYCKEGFYRD-LSKPISHRKACKECDCHPVGAAG-QT----CNQT 421
Query: 89 TGQCSCKPHVVGTNCDQCEVGH 110
TGQC CK V G C++C G+
Sbjct: 422 TGQCPCKDGVTGITCNRCAKGY 443
>UNIPROTKB|Q9HB63 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0016322 EMBL:CH471054
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AF278532 EMBL:AF297711 EMBL:AF119916 EMBL:AY330211
EMBL:AL137540 EMBL:BC013591 EMBL:BC136798 EMBL:BC136799
EMBL:AL833767 EMBL:AK024691 IPI:IPI00328091 IPI:IPI00385236
IPI:IPI00472613 PIR:T46383 RefSeq:NP_067052.2 UniGene:Hs.201034
ProteinModelPortal:Q9HB63 SMR:Q9HB63 DIP:DIP-46274N IntAct:Q9HB63
MINT:MINT-1463888 STRING:Q9HB63 PhosphoSite:Q9HB63 DMDM:76789662
PaxDb:Q9HB63 PRIDE:Q9HB63 Ensembl:ENST00000343702
Ensembl:ENST00000344911 Ensembl:ENST00000538383
Ensembl:ENST00000553059 GeneID:59277 KEGG:hsa:59277 UCSC:uc001tei.3
UCSC:uc009ztf.3 CTD:59277 GeneCards:GC12M095984 HGNC:HGNC:13658
HPA:HPA049832 MIM:610401 neXtProt:NX_Q9HB63 PharmGKB:PA31815
eggNOG:NOG329215 HOVERGEN:HBG082019 InParanoid:Q9HB63 KO:K06845
OMA:RSQDFGK PhylomeDB:Q9HB63 ChiTaRS:NTN4 GenomeRNAi:59277
NextBio:65162 ArrayExpress:Q9HB63 Bgee:Q9HB63 CleanEx:HS_NTN4
Genevestigator:Q9HB63 GermOnline:ENSG00000074527 GO:GO:0060668
Uniprot:Q9HB63
Length = 628
Score = 226 (84.6 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 48/117 (41%), Positives = 62/117 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGT--LETETFTPVCD 86
G C C +NT G C C PG++ D + P C+PC C+ G+ L + T CD
Sbjct: 357 GVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDA-CKPCSCHPVGSAVLPANSVT-FCD 414
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCL 142
G C CKP V G CD+C VG++ G+ GC+ CDC GS CDPITG C+
Sbjct: 415 PSNGDCPCKPGVAGRRCDRCMVGYWGF--GDYGCRPCDC--AGS----CDPITGDCI 463
Score = 203 (76.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 47/141 (33%), Positives = 66/141 (46%)
Query: 64 DCEPCQCYIPGT---LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNII----- 114
+C C+C + + ++ G C C+ + G C +C+ G Y +
Sbjct: 328 ECRTCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFS 387
Query: 115 SGEGCKSCDCDPVGSL----NRT--CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
+ + CK C C PVGS N CDP G C C+PGV G RC+ C ++GF GC+
Sbjct: 388 APDACKPCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCR 447
Query: 169 PCMCDPIGSNSLQCDP-SGQC 188
PC C GS CDP +G C
Sbjct: 448 PCDC--AGS----CDPITGDC 462
Score = 134 (52.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/176 (27%), Positives = 67/176 (38%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
G C+ C +NT G C C P Y D +C C+C G +T F
Sbjct: 291 GKCM-CKHNTAGSHCQHCAPLYNDRPWEAADGKTGAPNECRTCKCN--GHADTCHFDVNV 347
Query: 86 DQLTGQ-----CS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTC 134
+ +G C C+ + G C +C+ G Y + + + CK C C PVGS
Sbjct: 348 WEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAPDACKPCSCHPVGSAVLPA 407
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
+ +T C P G C C+P G + C CM G C P C G
Sbjct: 408 NSVT---FCDPS-NGD-CP-CKP---GVAGRRCDRCMVGYWGFGDYGCRPC-DCAG 453
Score = 35 (17.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 26 SVAGTTGDCLKCIY--NTG----GPQCDTCLPGY 53
+ G L C Y NT P+CD C Y
Sbjct: 51 TTCGQNATELYCFYSENTDLTCRQPKCDKCNAAY 84
>UNIPROTKB|F1PYQ8 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:AAEX03003878 EMBL:AAEX03003879
Ensembl:ENSCAFT00000030970 Uniprot:F1PYQ8
Length = 1573
Score = 231 (86.4 bits), Expect = 9.3e-18, P = 9.3e-18
Identities = 63/164 (38%), Positives = 81/164 (49%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DCEP-CQCYIPGTLETETFTPVCDQLT 89
C TG +C PG++G A A P G C C+C + CD ++
Sbjct: 1400 CEPTTGACRCG---PGFYGQACQHACPPGFHGAGCRAACECQHGAS---------CDPVS 1447
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC C G C++ CE G + GEGC+ CDC+ + CDPITGQCLC PG
Sbjct: 1448 GQCVCPAGFYGQLCEKGCEPGSF----GEGCREHCDCE----MGAACDPITGQCLCPPGR 1499
Query: 148 TGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
TG C+L C+P+ +G GC C C G + CDP SGQC
Sbjct: 1500 TGATCDLDCRPDFFG---PGCALRCSC---GGGAA-CDPVSGQC 1536
Score = 181 (68.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 53/151 (35%), Positives = 61/151 (40%)
Query: 49 CLPGYFGDALA--LPKG----DCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
C GY G P G CE PC C G+ CD TG C C +G
Sbjct: 1237 CAAGYHGSGCRQRCPPGRFGPGCEQPCGCLNGGS---------CDAATGACLCPAGFLGA 1287
Query: 102 NCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPN 158
+C C GH+ G GC C C TCDP+TG C C PG TGT CE C N
Sbjct: 1288 DCSLSCPQGHF----GPGCAHVCGCGQAV----TCDPVTGSCACPPGTTGTHCEHGCPQN 1339
Query: 159 HYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
+G + + C C N C S G C
Sbjct: 1340 RFGVNCEHV--CSC----RNGGLCHASDGSC 1364
Score = 181 (68.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 53/159 (33%), Positives = 71/159 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTP-VCDQLTGQCSC 94
C TG C C PGY G + C P + PG + +C +TG CSC
Sbjct: 796 CEPGTGA--C-LCRPGYVGSRC---QDTC-PAGWFGPGCQMRCSCANDGLCHPVTGHCSC 848
Query: 95 KPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
P G +C + C+ G + G C C C P G + +CD ++G C+C G TG RC
Sbjct: 849 APGWTGLSCQRACDGGRW----GPDCSHPCTCSP-G--HGSCDAVSGLCVCEAGYTGPRC 901
Query: 153 EL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
E C H+G GC + C C+ + CD SG C
Sbjct: 902 EQRCPQGHFG---PGCGRQCQCE----HGAACDHVSGAC 933
Score = 178 (67.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 43/110 (39%), Positives = 51/110 (46%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQC 141
+C G CSC G NC+Q C GHY G C+ C C N TC+P TG C
Sbjct: 1356 LCHASDGSCSCGLGWTGPNCEQACPPGHY----GAACRLECSCQN----NGTCEPTTGAC 1407
Query: 142 LCRPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C PG G C+ C P +G GC+ C C + CDP SGQC
Sbjct: 1408 RCGPGFYGQACQHACPPGFHGA---GCRAACECQ----HGASCDPVSGQC 1450
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 44/109 (40%), Positives = 52/109 (47%)
Query: 85 CDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
CD +TG C C P V GT C D C G Y G+ C K C C G C + G CL
Sbjct: 577 CDPVTGACRCPPGVGGTRCEDGCPKGFY----GKQCHKKCHCANRGR----CHRLYGACL 628
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
C PG+ G C L C P +G GC + C C+ N+L CD G C
Sbjct: 629 CDPGLYGRFCHLACPPWAFG---PGCSEECQCEQ--QNTLACDRRDGSC 672
Score = 169 (64.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/155 (33%), Positives = 70/155 (45%)
Query: 45 QCDT-CLPGYFGDAL--ALPKG----DCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
QC+ C GY G P G +C CY G P C+++TGQC C P
Sbjct: 714 QCEKQCPAGYQGKGCDQECPAGTFGVNCSG-SCYCGGA-------P-CNRVTGQCLCPPG 764
Query: 98 VVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LC 155
G +C C G + + E C +C+ G+ C+P TG CLCRPG G+RC+ C
Sbjct: 765 KTGDDCGADCPEGRWGLGCQEICPACEH---GA---ACEPGTGACLCRPGYVGSRCQDTC 818
Query: 156 QPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
+G GC+ C C +N C P +G C
Sbjct: 819 PAGWFG---PGCQMRCSC----ANDGLCHPVTGHC 846
Score = 167 (63.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 59/171 (34%), Positives = 75/171 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG C C PG+ G A P G C + CQC PG C +T
Sbjct: 1141 CHHVTGA--C-LCPPGWRGSRCENACPHGWFGEACAQRCQCP-PGA--------ACHHVT 1188
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C C G C+Q C G + GE C + C C P G N+ C P G C+C G
Sbjct: 1189 GECRCPRGFTGPGCEQACPPGTF----GESCGQKCHC-P-GE-NQACHPALGTCVCAAGY 1241
Query: 148 TGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC--PGVFM 193
G+ C + C P +G GC+ PC C GS CD + G C P F+
Sbjct: 1242 HGSGCRQRCPPGRFG---PGCEQPCGCLNGGS----CDAATGACLCPAGFL 1285
Score = 165 (63.1 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 57/163 (34%), Positives = 68/163 (41%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G CL C G C C P FG P G E CQC TL CD+ G
Sbjct: 625 GACL-CDPGLYGRFCHLACPPWAFG-----P-GCSEECQCEQQNTL-------ACDRRDG 670
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC--LCRPG 146
CSCK G C D+C G + G GC ++C C P G CDPI+GQC C G
Sbjct: 671 SCSCKAGFQGERCQDECAPGFF----GPGCLQACTC-PQGV---ACDPISGQCEKQCPAG 722
Query: 147 VTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
G C+ C +G + G C C N + +GQC
Sbjct: 723 YQGKGCDQECPAGTFGVNCSGS--CYCGGAPCNRV----TGQC 759
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 56/160 (35%), Positives = 69/160 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL---ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C + +G C TC G+ G AL A P G C G + P CD ++G C
Sbjct: 926 CDHVSGA--C-TCPAGWRG-ALCERACPAGFFG-LDCR--GVCDCAAGAP-CDSVSGSCL 977
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G CDQ C Y G C ++C C S CDP+ GQC C PG G+
Sbjct: 978 CPAGRQGPRCDQACPAHTY----GHNCSQTCSCFNGAS----CDPVHGQCHCGPGWMGST 1029
Query: 152 C-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C E C YG C+ C+C G+ CDP SG C
Sbjct: 1030 CLEACPTGSYG---QNCQHTCLCQHGGT----CDPVSGHC 1062
Score = 159 (61.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 61/198 (30%), Positives = 82/198 (41%)
Query: 15 LCVGPPSDILKSVAGTTG-DCLK-CIYNTGGPQCD---TCLPGYFG-DALA----LPKGD 64
LC P + G TG C + C GP C TC PG+ DA++ G
Sbjct: 838 LC-HPVTGHCSCAPGWTGLSCQRACDGGRWGPDCSHPCTCSPGHGSCDAVSGLCVCEAGY 896
Query: 65 CEP-CQ--C----YIPGT---LETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNI 113
P C+ C + PG + E CD ++G C+C G C++ C G +
Sbjct: 897 TGPRCEQRCPQGHFGPGCGRQCQCE-HGAACDHVSGACTCPAGWRGALCERACPAGFF-- 953
Query: 114 ISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH-YGFSLDGCKPCM 171
G C+ CDC + CD ++G CLC G G RC+ P H YG + + C
Sbjct: 954 --GLDCRGVCDC----AAGAPCDSVSGSCLCPAGRQGPRCDQACPAHTYGHNCS--QTCS 1005
Query: 172 CDPIGSNSLQCDP-SGQC 188
C N CDP GQC
Sbjct: 1006 C----FNGASCDPVHGQC 1019
Score = 152 (58.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 45/129 (34%), Positives = 55/129 (42%)
Query: 45 QCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE--TETFTPVCDQLTGQCSCKPHVVGTN 102
QC C G++G KG CEP + G E CD +TGQC C P G
Sbjct: 1449 QC-VCPAGFYGQLCE--KG-CEPGS-FGEGCREHCDCEMGAACDPITGQCLCPPGRTGAT 1503
Query: 103 CD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHY 160
CD C + G GC C C G CDP++GQC C G G C+ +P
Sbjct: 1504 CDLDCRPDFF----GPGCALRCSC---GG-GAACDPVSGQCRCVDGYMGPTCQQGEP--- 1552
Query: 161 GFSLDGCKP 169
GF G +P
Sbjct: 1553 GFQGGGPQP 1561
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/113 (37%), Positives = 48/113 (42%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC------KSCDCDPVGSLNR-TCDPI 137
CD +C P + G CD C G +I E C K+C G N TCDP+
Sbjct: 525 CDDCRNGGACLPGLDG--CD-CPEGWTGLICNETCPPDTFGKNCSLS-CGCQNGGTCDPV 580
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGS-----NSLQCDP 184
TG C C PGV GTRCE C YG K C C G + CDP
Sbjct: 581 TGACRCPPGVGGTRCEDGCPKGFYGKQCH--KKCHCANRGRCHRLYGACLCDP 631
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/171 (29%), Positives = 69/171 (40%)
Query: 37 CIYNTGGPQCD------TCLPGYFGDAL---ALPK---GDCE-PCQCYIPGTLETETFTP 83
C+ GG CD TC G+ G A LP C+ C+C G
Sbjct: 1047 CLCQHGGT-CDPVSGHCTCPEGWTGLACEEECLPGRFGAGCKHSCRCLNGGD-------- 1097
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
CD+ +G+C C G C C G + + E C +C TC +TG CL
Sbjct: 1098 -CDRRSGRCLCPAGWTGDQCQSLCAEGTFGVRCEEHC-AC------RRGATCHHVTGACL 1149
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQCPGVF 192
C PG G+RCE P +G+ + C + C C P G+ +CP F
Sbjct: 1150 CPPGWRGSRCENACP--HGWFGEACAQRCQCPP-GAACHHVTGECRCPRGF 1197
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/163 (30%), Positives = 58/163 (35%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G C C GP C+ C PG++G A L C C GT C+ TG
Sbjct: 1362 GSC-SCGLGWTGPNCEQACPPGHYGAACRLE------CSCQNNGT---------CEPTTG 1405
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK---SCDCDPVGSLNRTCDP-ITGQ-CL-- 142
C C P G C C G + C+ CDPV C GQ C
Sbjct: 1406 ACRCGPGFYGQACQHACPPGFHGAGCRAACECQHGASCDPVSG-QCVCPAGFYGQLCEKG 1464
Query: 143 CRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCD 183
C PG G C E C G + D C+C P G CD
Sbjct: 1465 CEPGSFGEGCREHCDCE-MGAACDPITGQCLCPP-GRTGATCD 1505
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/175 (30%), Positives = 69/175 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C G +C DTC G+FG + C C G +C +T
Sbjct: 800 TGACL-CRPGYVGSRCQDTCPAGWFGPGCQMR------CSCANDG---------LCHPVT 843
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCD-----CDPVGSLNRTCDP-ITG-QC 141
G CSC P G +C + C+ G + C +C CD V L C+ TG +C
Sbjct: 844 GHCSCAPGWTGLSCQRACDGGRWGPDCSHPC-TCSPGHGSCDAVSGLC-VCEAGYTGPRC 901
Query: 142 --LCRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
C G G C CQ H G + D C C P G C+ + CP F
Sbjct: 902 EQRCPQGHFGPGCGRQCQCEH-GAACDHVSGACTC-PAGWRGALCERA--CPAGF 952
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 56/174 (32%), Positives = 70/174 (40%)
Query: 31 TGDCLKCIYNTGGPQCDTCLP-GYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C G +C+ P G+FG+A A + CQC PG C +T
Sbjct: 1145 TGACL-CPPGWRGSRCENACPHGWFGEACA------QRCQCP-PGA--------ACHHVT 1188
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC----KSCDCDPVGSLNRTCDPITGQ---- 140
G+C C G C+Q C G + G+ C ++ C P +L TC G
Sbjct: 1189 GECRCPRGFTGPGCEQACPPGTFGESCGQKCHCPGENQACHP--ALG-TCVCAAGYHGSG 1245
Query: 141 CL--CRPGVTGTRCELCQPNHY--GFSLDGCK-PCMCDPIGSNSLQCDPSGQCP 189
C C PG G CE QP G S D C+C P G C S CP
Sbjct: 1246 CRQRCPPGRFGPGCE--QPCGCLNGGSCDAATGACLC-PAGFLGADCSLS--CP 1294
>UNIPROTKB|F1PYQ7 [details] [associations]
symbol:MEGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:RIEMEVI EMBL:AAEX03003878
EMBL:AAEX03003879 Ensembl:ENSCAFT00000030971 Uniprot:F1PYQ7
Length = 1604
Score = 231 (86.4 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 63/164 (38%), Positives = 81/164 (49%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DCEP-CQCYIPGTLETETFTPVCDQLT 89
C TG +C PG++G A A P G C C+C + CD ++
Sbjct: 1435 CEPTTGACRCG---PGFYGQACQHACPPGFHGAGCRAACECQHGAS---------CDPVS 1482
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC C G C++ CE G + GEGC+ CDC+ + CDPITGQCLC PG
Sbjct: 1483 GQCVCPAGFYGQLCEKGCEPGSF----GEGCREHCDCE----MGAACDPITGQCLCPPGR 1534
Query: 148 TGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
TG C+L C+P+ +G GC C C G + CDP SGQC
Sbjct: 1535 TGATCDLDCRPDFFG---PGCALRCSC---GGGAA-CDPVSGQC 1571
Score = 181 (68.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/151 (35%), Positives = 61/151 (40%)
Query: 49 CLPGYFGDALA--LPKG----DCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
C GY G P G CE PC C G+ CD TG C C +G
Sbjct: 1272 CAAGYHGSGCRQRCPPGRFGPGCEQPCGCLNGGS---------CDAATGACLCPAGFLGA 1322
Query: 102 NCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPN 158
+C C GH+ G GC C C TCDP+TG C C PG TGT CE C N
Sbjct: 1323 DCSLSCPQGHF----GPGCAHVCGCGQAV----TCDPVTGSCACPPGTTGTHCEHGCPQN 1374
Query: 159 HYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
+G + + C C N C S G C
Sbjct: 1375 RFGVNCEHV--CSC----RNGGLCHASDGSC 1399
Score = 181 (68.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 53/159 (33%), Positives = 71/159 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTP-VCDQLTGQCSC 94
C TG C C PGY G + C P + PG + +C +TG CSC
Sbjct: 831 CEPGTGA--C-LCRPGYVGSRC---QDTC-PAGWFGPGCQMRCSCANDGLCHPVTGHCSC 883
Query: 95 KPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
P G +C + C+ G + G C C C P G + +CD ++G C+C G TG RC
Sbjct: 884 APGWTGLSCQRACDGGRW----GPDCSHPCTCSP-G--HGSCDAVSGLCVCEAGYTGPRC 936
Query: 153 EL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
E C H+G GC + C C+ + CD SG C
Sbjct: 937 EQRCPQGHFG---PGCGRQCQCE----HGAACDHVSGAC 968
Score = 178 (67.7 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 43/110 (39%), Positives = 51/110 (46%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQC 141
+C G CSC G NC+Q C GHY G C+ C C N TC+P TG C
Sbjct: 1391 LCHASDGSCSCGLGWTGPNCEQACPPGHY----GAACRLECSCQN----NGTCEPTTGAC 1442
Query: 142 LCRPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C PG G C+ C P +G GC+ C C + CDP SGQC
Sbjct: 1443 RCGPGFYGQACQHACPPGFHGA---GCRAACECQ----HGASCDPVSGQC 1485
Score = 171 (65.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 44/109 (40%), Positives = 52/109 (47%)
Query: 85 CDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
CD +TG C C P V GT C D C G Y G+ C K C C G C + G CL
Sbjct: 612 CDPVTGACRCPPGVGGTRCEDGCPKGFY----GKQCHKKCHCANRGR----CHRLYGACL 663
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
C PG+ G C L C P +G GC + C C+ N+L CD G C
Sbjct: 664 CDPGLYGRFCHLACPPWAFG---PGCSEECQCEQ--QNTLACDRRDGSC 707
Score = 169 (64.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 52/155 (33%), Positives = 70/155 (45%)
Query: 45 QCDT-CLPGYFGDAL--ALPKG----DCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
QC+ C GY G P G +C CY G P C+++TGQC C P
Sbjct: 749 QCEKQCPAGYQGKGCDQECPAGTFGVNCSG-SCYCGGA-------P-CNRVTGQCLCPPG 799
Query: 98 VVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LC 155
G +C C G + + E C +C+ G+ C+P TG CLCRPG G+RC+ C
Sbjct: 800 KTGDDCGADCPEGRWGLGCQEICPACEH---GA---ACEPGTGACLCRPGYVGSRCQDTC 853
Query: 156 QPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
+G GC+ C C +N C P +G C
Sbjct: 854 PAGWFG---PGCQMRCSC----ANDGLCHPVTGHC 881
Score = 167 (63.8 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 59/171 (34%), Positives = 75/171 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG C C PG+ G A P G C + CQC PG C +T
Sbjct: 1176 CHHVTGA--C-LCPPGWRGSRCENACPHGWFGEACAQRCQCP-PGA--------ACHHVT 1223
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C C G C+Q C G + GE C + C C P G N+ C P G C+C G
Sbjct: 1224 GECRCPRGFTGPGCEQACPPGTF----GESCGQKCHC-P-GE-NQACHPALGTCVCAAGY 1276
Query: 148 TGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC--PGVFM 193
G+ C + C P +G GC+ PC C GS CD + G C P F+
Sbjct: 1277 HGSGCRQRCPPGRFG---PGCEQPCGCLNGGS----CDAATGACLCPAGFL 1320
Score = 165 (63.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 57/163 (34%), Positives = 68/163 (41%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G CL C G C C P FG P G E CQC TL CD+ G
Sbjct: 660 GACL-CDPGLYGRFCHLACPPWAFG-----P-GCSEECQCEQQNTL-------ACDRRDG 705
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC--LCRPG 146
CSCK G C D+C G + G GC ++C C P G CDPI+GQC C G
Sbjct: 706 SCSCKAGFQGERCQDECAPGFF----GPGCLQACTC-PQGV---ACDPISGQCEKQCPAG 757
Query: 147 VTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
G C+ C +G + G C C N + +GQC
Sbjct: 758 YQGKGCDQECPAGTFGVNCSGS--CYCGGAPCNRV----TGQC 794
Score = 161 (61.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 56/160 (35%), Positives = 69/160 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL---ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C + +G C TC G+ G AL A P G C G + P CD ++G C
Sbjct: 961 CDHVSGA--C-TCPAGWRG-ALCERACPAGFFG-LDCR--GVCDCAAGAP-CDSVSGSCL 1012
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G CDQ C Y G C ++C C S CDP+ GQC C PG G+
Sbjct: 1013 CPAGRQGPRCDQACPAHTY----GHNCSQTCSCFNGAS----CDPVHGQCHCGPGWMGST 1064
Query: 152 C-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C E C YG C+ C+C G+ CDP SG C
Sbjct: 1065 CLEACPTGSYG---QNCQHTCLCQHGGT----CDPVSGHC 1097
Score = 159 (61.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 61/198 (30%), Positives = 82/198 (41%)
Query: 15 LCVGPPSDILKSVAGTTG-DCLK-CIYNTGGPQCD---TCLPGYFG-DALA----LPKGD 64
LC P + G TG C + C GP C TC PG+ DA++ G
Sbjct: 873 LC-HPVTGHCSCAPGWTGLSCQRACDGGRWGPDCSHPCTCSPGHGSCDAVSGLCVCEAGY 931
Query: 65 CEP-CQ--C----YIPGT---LETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNI 113
P C+ C + PG + E CD ++G C+C G C++ C G +
Sbjct: 932 TGPRCEQRCPQGHFGPGCGRQCQCE-HGAACDHVSGACTCPAGWRGALCERACPAGFF-- 988
Query: 114 ISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH-YGFSLDGCKPCM 171
G C+ CDC + CD ++G CLC G G RC+ P H YG + + C
Sbjct: 989 --GLDCRGVCDC----AAGAPCDSVSGSCLCPAGRQGPRCDQACPAHTYGHNCS--QTCS 1040
Query: 172 CDPIGSNSLQCDP-SGQC 188
C N CDP GQC
Sbjct: 1041 C----FNGASCDPVHGQC 1054
Score = 148 (57.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 43/121 (35%), Positives = 51/121 (42%)
Query: 45 QCDTCLPGYFGDALALPKGDCEPCQCYIPGTLE--TETFTPVCDQLTGQCSCKPHVVGTN 102
QC C G++G KG CEP + G E CD +TGQC C P G
Sbjct: 1484 QC-VCPAGFYGQLCE--KG-CEPGS-FGEGCREHCDCEMGAACDPITGQCLCPPGRTGAT 1538
Query: 103 CD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE--LCQPN 158
CD C + G GC C C G CDP++GQC C G G C+ QP
Sbjct: 1539 CDLDCRPDFF----GPGCALRCSC---GG-GAACDPVSGQCRCVDGYMGPTCQQVASQPA 1590
Query: 159 H 159
H
Sbjct: 1591 H 1591
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/113 (37%), Positives = 48/113 (42%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC------KSCDCDPVGSLNR-TCDPI 137
CD +C P + G CD C G +I E C K+C G N TCDP+
Sbjct: 560 CDDCRNGGACLPGLDG--CD-CPEGWTGLICNETCPPDTFGKNCSLS-CGCQNGGTCDPV 615
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGS-----NSLQCDP 184
TG C C PGV GTRCE C YG K C C G + CDP
Sbjct: 616 TGACRCPPGVGGTRCEDGCPKGFYGKQCH--KKCHCANRGRCHRLYGACLCDP 666
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/171 (29%), Positives = 69/171 (40%)
Query: 37 CIYNTGGPQCD------TCLPGYFGDAL---ALPK---GDCE-PCQCYIPGTLETETFTP 83
C+ GG CD TC G+ G A LP C+ C+C G
Sbjct: 1082 CLCQHGGT-CDPVSGHCTCPEGWTGLACEEECLPGRFGAGCKHSCRCLNGGD-------- 1132
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
CD+ +G+C C G C C G + + E C +C TC +TG CL
Sbjct: 1133 -CDRRSGRCLCPAGWTGDQCQSLCAEGTFGVRCEEHC-AC------RRGATCHHVTGACL 1184
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQCPGVF 192
C PG G+RCE P +G+ + C + C C P G+ +CP F
Sbjct: 1185 CPPGWRGSRCENACP--HGWFGEACAQRCQCPP-GAACHHVTGECRCPRGF 1232
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/163 (30%), Positives = 58/163 (35%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G C C GP C+ C PG++G A L C C GT C+ TG
Sbjct: 1397 GSC-SCGLGWTGPNCEQACPPGHYGAACRLE------CSCQNNGT---------CEPTTG 1440
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK---SCDCDPVGSLNRTCDP-ITGQ-CL-- 142
C C P G C C G + C+ CDPV C GQ C
Sbjct: 1441 ACRCGPGFYGQACQHACPPGFHGAGCRAACECQHGASCDPVSG-QCVCPAGFYGQLCEKG 1499
Query: 143 CRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCD 183
C PG G C E C G + D C+C P G CD
Sbjct: 1500 CEPGSFGEGCREHCDCE-MGAACDPITGQCLCPP-GRTGATCD 1540
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/175 (30%), Positives = 69/175 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C G +C DTC G+FG + C C G +C +T
Sbjct: 835 TGACL-CRPGYVGSRCQDTCPAGWFGPGCQMR------CSCANDG---------LCHPVT 878
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCD-----CDPVGSLNRTCDP-ITG-QC 141
G CSC P G +C + C+ G + C +C CD V L C+ TG +C
Sbjct: 879 GHCSCAPGWTGLSCQRACDGGRWGPDCSHPC-TCSPGHGSCDAVSGLC-VCEAGYTGPRC 936
Query: 142 --LCRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
C G G C CQ H G + D C C P G C+ + CP F
Sbjct: 937 EQRCPQGHFGPGCGRQCQCEH-GAACDHVSGACTC-PAGWRGALCERA--CPAGF 987
Score = 127 (49.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 56/174 (32%), Positives = 70/174 (40%)
Query: 31 TGDCLKCIYNTGGPQCDTCLP-GYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C G +C+ P G+FG+A A + CQC PG C +T
Sbjct: 1180 TGACL-CPPGWRGSRCENACPHGWFGEACA------QRCQCP-PGA--------ACHHVT 1223
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC----KSCDCDPVGSLNRTCDPITGQ---- 140
G+C C G C+Q C G + G+ C ++ C P +L TC G
Sbjct: 1224 GECRCPRGFTGPGCEQACPPGTFGESCGQKCHCPGENQACHP--ALG-TCVCAAGYHGSG 1280
Query: 141 CL--CRPGVTGTRCELCQPNHY--GFSLDGCK-PCMCDPIGSNSLQCDPSGQCP 189
C C PG G CE QP G S D C+C P G C S CP
Sbjct: 1281 CRQRCPPGRFGPGCE--QPCGCLNGGSCDAATGACLC-PAGFLGADCSLS--CP 1329
>ZFIN|ZDB-GENE-030131-1033 [details] [associations]
symbol:agrn "agrin" species:7955 "Danio rerio"
[GO:0005605 "basal lamina" evidence=IEA] [GO:0043113 "receptor
clustering" evidence=IEA] [GO:0007213 "G-protein coupled
acetylcholine receptor signaling pathway" evidence=IEA] [GO:0043236
"laminin binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002350
InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050 Pfam:PF03146
Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121 SMART:SM00181
SMART:SM00280 ZFIN:ZDB-GENE-030131-1033 GO:GO:0009952 GO:GO:0007422
GO:GO:0007417 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
GO:GO:0007409 PROSITE:PS01186 HOGENOM:HOG000033860
HOVERGEN:HBG080471 KO:K06254 InterPro:IPR002049 InterPro:IPR003645
InterPro:IPR001791 InterPro:IPR000082 InterPro:IPR008993
Pfam:PF00053 Pfam:PF00054 Pfam:PF01390 SMART:SM00180 SMART:SM00274
SMART:SM00282 SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 InterPro:IPR011497
EMBL:EU716327 IPI:IPI00897584 RefSeq:NP_001170923.1
UniGene:Dr.44162 ProteinModelPortal:B3GQ72 GeneID:565373
KEGG:dre:565373 eggNOG:NOG291045 NextBio:20885851 Uniprot:B3GQ72
Length = 2028
Score = 232 (86.7 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 58/177 (32%), Positives = 82/177 (46%)
Query: 17 VGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTL 76
V PP +++ S C + +Y C+ G LA G CQC G+
Sbjct: 752 VSPPPELVASQ-----HCSQTVYGC----CEDNKTAALGVGLA---GCPSMCQCNHYGS- 798
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYN---IISGE--GCKSCDCDPVGSLN 131
+ CD TGQCSCKP V G CD+CE G +N I++ GC C+CD +GS+
Sbjct: 799 ----YGGTCDPSTGQCSCKPGVGGLKCDRCEPGFWNFRGIVTENMSGCTPCNCDGLGSVR 854
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C+ ++G C C+PGV G +C +C P+ ++GC P L C C
Sbjct: 855 DDCEQMSGLCSCKPGVKGMKCNVC-PDGSKMGVNGCDKGPKAPKSCAELVCHFGSSC 910
Score = 203 (76.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 55/169 (32%), Positives = 71/169 (42%)
Query: 35 LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQLTGQCS 93
L C P C + Y D L K CE + T +L
Sbjct: 705 LNCQIVLHSPVCGSDGNTYSSDC-ELKKTRCEKQIDLSVQSQGPCPTIVSPPPELVASQH 763
Query: 94 CKPHVVGTNCDQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
C V G C+ + + GC S C C+ GS TCDP TGQC C+PGV G +C
Sbjct: 764 CSQTVYGC-CEDNKTAALGV-GLAGCPSMCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKC 821
Query: 153 ELCQPNHYGF------SLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
+ C+P + F ++ GC PC CD +GS C+ SG C PGV
Sbjct: 822 DRCEPGFWNFRGIVTENMSGCTPCNCDGLGSVRDDCEQMSGLCSCKPGV 870
>UNIPROTKB|F1MSI2 [details] [associations]
symbol:AGRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043113 "receptor clustering" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0043236 "laminin binding"
evidence=IEA] [GO:0007213 "G-protein coupled acetylcholine receptor
signaling pathway" evidence=IEA] InterPro:IPR000742
InterPro:IPR002350 InterPro:IPR004850 Pfam:PF00008 Pfam:PF00050
Pfam:PF03146 Pfam:PF07648 PROSITE:PS50026 PROSITE:PS51121
SMART:SM00181 SMART:SM00280 GO:GO:0005615 GO:GO:0009986
GO:GO:0043525 GO:GO:0007528 GO:GO:0045944 GO:GO:0007009
GO:GO:0045202 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 GO:GO:0043113 GO:GO:0007213
PROSITE:PS01186 GO:GO:0030548 GO:GO:2000541 GO:GO:0032314
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
InterPro:IPR000082 InterPro:IPR008993 Pfam:PF00053 Pfam:PF00054
Pfam:PF01390 SMART:SM00180 SMART:SM00274 SMART:SM00282
SMART:SM00200 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 OMA:TNRWLRV GO:GO:0045213
GO:GO:0001934 InterPro:IPR011497 GeneTree:ENSGT00530000063501
GO:GO:0008582 EMBL:DAAA02043249 IPI:IPI00708223
Ensembl:ENSBTAT00000017563 Uniprot:F1MSI2
Length = 2032
Score = 232 (86.7 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 46/126 (36%), Positives = 63/126 (50%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYN----IISGE-GCKSC 122
CQC G+ + CD +TGQCSC+P V G CD+CE G +N + G GC C
Sbjct: 784 CQCNPHGS-----YGGTCDPVTGQCSCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPC 838
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQC 182
CDP G++ C+ +TG C C+PGV G +C C P+ GC+ P + C
Sbjct: 839 SCDPRGAVRDDCEQMTGLCSCKPGVAGPKCGQC-PDGRALGPAGCETDSSPPKTCAEMLC 897
Query: 183 DPSGQC 188
+ C
Sbjct: 898 EFGASC 903
Score = 219 (82.2 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 52/146 (35%), Positives = 69/146 (47%)
Query: 60 LPKGDCEPC-QCYI--PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISG 116
L K CE + Y+ G T P+ + C+ P+ C Q + +
Sbjct: 722 LKKARCESQPELYVVAQGACRGPTLAPLPPAIPLHCAQTPY----GCCQDNITVAQGVGL 777
Query: 117 EGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF------SLDGCKP 169
GC SC C+P GS TCDP+TGQC CRPGV G +C+ C+P + F GC P
Sbjct: 778 AGCPSSCQCNPHGSYGGTCDPVTGQCSCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTP 837
Query: 170 CMCDPIGSNSLQCDP-SGQC---PGV 191
C CDP G+ C+ +G C PGV
Sbjct: 838 CSCDPRGAVRDDCEQMTGLCSCKPGV 863
Score = 170 (64.9 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 45/147 (30%), Positives = 59/147 (40%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGY--FGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
TG C C GG +CD C PG+ F + + C PC C G + + C+Q+
Sbjct: 800 TGQC-SCRPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCSCDPRGAVRDD-----CEQM 853
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
TG CSCKP V G C QC G + GC++ P C+ C+ G
Sbjct: 854 TGLCSCKPGVAGPKCGQCPDGR--ALGPAGCETDSSPPKTCAEMLCE-FGASCVEEAG-- 908
Query: 149 GTRCELCQPNHYGFSLDGCKPCMCDPI 175
C P G D K C D +
Sbjct: 909 SAHCVCPTPTCPG--ADATKVCGSDGV 933
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 224 (83.9 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 62/188 (32%), Positives = 81/188 (43%)
Query: 32 GDCLKCIYNTGGPQCDTC------LPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
G C C ++T G C+ C P D L C C+C G E+ F
Sbjct: 276 GKC-SCRHHTAGDHCERCHRLYNDRPWRAADGLTGEANQCVECKCN--GHAESCHFDESI 332
Query: 86 DQLTGQ-----CSCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCD 135
+GQ C C + G +C C+ G Y + + C C C+ VGS C
Sbjct: 333 WLRSGQQHGGVCDCLHNTTGQHCQHCQSGFYRDPEKPSTAPDSCTPCMCNHVGS--SYCK 390
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQCPGVFMN 194
P G+C+C+PGV G CE C ++G GCKPC C G CDP +G C M
Sbjct: 391 PDNGECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQC--AGD----CDPYTGDC----MI 440
Query: 195 RAEMSSDD 202
R+E SDD
Sbjct: 441 RSE--SDD 446
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 230 (86.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 48/147 (32%), Positives = 69/147 (46%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C PGY+ D + P G C PC C + C +G C +C+ + G +C++C+
Sbjct: 45 CRPGYYRDIKSFPAGRCVPCNC--------NGHSNRCQDGSGVCINCQHNTAGEHCERCQ 96
Query: 108 VGHYNIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPNHYGF--S 163
G+Y C+ C C S C G +C C+PG TG +CE C P ++G
Sbjct: 97 EGYYGSAIHGSCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQK 156
Query: 164 LDG-CKPCMCDPIGSNSLQCDP-SGQC 188
G C+PC C+ G CDP +G C
Sbjct: 157 FGGSCQPCNCNSNGQFGT-CDPLTGDC 182
Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 44/129 (34%), Positives = 64/129 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
+G C+ C +NT G C+ C GY+G A+ G C C C P T +F C D
Sbjct: 77 SGVCINCQHNTAGEHCERCQEGYYGSAI---HGSCRVCPC--P---HTNSFATGCAVDGG 128
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+C+CKP G C++C G++ G C+ C+C+ G TCDP+TG C+ +
Sbjct: 129 AVRCACKPGYTGAQCERCAPGYFGNPQKFGGSCQPCNCNSNGQFG-TCDPLTGDCVSQEP 187
Query: 147 VTGTRCELC 155
G+ E C
Sbjct: 188 KDGSPAEEC 196
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+C P ++ + G ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 110 VCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNS 168
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
G T CD LTG C + G+ ++C+
Sbjct: 169 NGQFGT------CDPLTGDCVSQEPKDGSPAEECD 197
>UNIPROTKB|F1N805 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
EMBL:AADN02014130 EMBL:AADN02014129 IPI:IPI00818986
ProteinModelPortal:F1N805 Ensembl:ENSGALT00000036243
ArrayExpress:F1N805 Uniprot:F1N805
Length = 560
Score = 223 (83.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 58/178 (32%), Positives = 81/178 (45%)
Query: 30 TTGD-CLKC--IYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT---LETETFTP 83
T GD C KC +YN D P GD +C+ C+C+ + +
Sbjct: 244 TAGDHCEKCAPLYN------DQ--PWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLA 295
Query: 84 VCDQLTGQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRT---- 133
+ G C +CK + G C +C+ G+Y + S E CK C C P+GS N T
Sbjct: 296 SGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEVCKPCSCQPMGSANATFSRS 355
Query: 134 --CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C P TG C C+PGV G C+ C ++GF +GC+PC C + CD +G C
Sbjct: 356 WRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC------ARDCDQHTGNC 407
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/173 (28%), Positives = 72/173 (41%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF------GDALALPKGDCEPCQCYIPGT---LETETFT 82
G C+ C +NT G C+ C P Y GD +C+ C+C+ + +
Sbjct: 236 GKCV-CRHNTAGDHCEKCAPLYNDQPWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWL 294
Query: 83 PVCDQLTGQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDP 136
+ G C +CK + G C +C+ G+Y + S E CK C C P+GS N T
Sbjct: 295 ASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEVCKPCSCQPMGSANAT--- 351
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQ-CDPSGQC 188
+ C P TG C C+P G + D C G N + CD + C
Sbjct: 352 FSRSWRCHPK-TGF-C-YCKPGVAGPNCDRCLMGYWG-FGENGCRPCDCARDC 400
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 223 (83.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 52/158 (32%), Positives = 74/158 (46%)
Query: 37 CIYNTGGPQCDTCLPGYFGD----ALALPKGDCEPCQCYIPGT---LETETFTPVCDQLT 89
C +NT GP+CD C P ++ A A +C C C + E + +
Sbjct: 283 CKHNTEGPECDRCKPFHYDRPWQRASAREANECLACNCNLHARRCRFNMELYKLSGRKSG 342
Query: 90 GQC-SCKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C +C+ + G +C C+ G Y +I + CK+CDC PVG+ +TC+ TGQC C
Sbjct: 343 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGKTCNQTTGQCPC 402
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDP-IGSNSL 180
+ GVTG C C + S PC+ P I SL
Sbjct: 403 KDGVTGLTCNRCAKG-FQQSRSPVAPCIKIPAINPTSL 439
Score = 142 (55.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 36/118 (30%), Positives = 48/118 (40%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALA--LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
G CL C +NT G C C G++ D + C+ C C+ G C+Q T
Sbjct: 343 GVCLNCRHNTAGRHCHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGK-----TCNQTT 397
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEG-C-KSCDCDPVGSLNRTCDPITGQCLCRP 145
GQC CK V G C++C G S C K +P + T P C+P
Sbjct: 398 GQCPCKDGVTGLTCNRCAKGFQQSRSPVAPCIKIPAINPTSLVTSTEAPADCDSYCKP 455
>UNIPROTKB|F1P486 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02014130
EMBL:AADN02014129 IPI:IPI00581824 Ensembl:ENSGALT00000010226
OMA:NCTATFG ArrayExpress:F1P486 Uniprot:F1P486
Length = 613
Score = 223 (83.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 58/178 (32%), Positives = 81/178 (45%)
Query: 30 TTGD-CLKC--IYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT---LETETFTP 83
T GD C KC +YN D P GD +C+ C+C+ + +
Sbjct: 277 TAGDHCEKCAPLYN------DQ--PWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWLA 328
Query: 84 VCDQLTGQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRT---- 133
+ G C +CK + G C +C+ G+Y + S E CK C C P+GS N T
Sbjct: 329 SGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEVCKPCSCQPMGSANATFSRS 388
Query: 134 --CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C P TG C C+PGV G C+ C ++GF +GC+PC C + CD +G C
Sbjct: 389 WRCHPKTGFCYCKPGVAGPNCDRCLMGYWGFGENGCRPCDC------ARDCDQHTGNC 440
Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 50/173 (28%), Positives = 72/173 (41%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYF------GDALALPKGDCEPCQCYIPGT---LETETFT 82
G C+ C +NT G C+ C P Y GD +C+ C+C+ + +
Sbjct: 269 GKCV-CRHNTAGDHCEKCAPLYNDQPWKPGDGKTGAPNECKKCRCHNHADSCHFDLSVWL 327
Query: 83 PVCDQLTGQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDP 136
+ G C +CK + G C +C+ G+Y + S E CK C C P+GS N T
Sbjct: 328 ASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDRGKPMSSAEVCKPCSCQPMGSANAT--- 384
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQ-CDPSGQC 188
+ C P TG C C+P G + D C G N + CD + C
Sbjct: 385 FSRSWRCHPK-TGF-C-YCKPGVAGPNCDRCLMGYWG-FGENGCRPCDCARDC 433
>UNIPROTKB|F1M1L0 [details] [associations]
symbol:RGD1565947 "Protein RGD1565947" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0016322
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
PROSITE:PS51117 GO:GO:0060668 IPI:IPI00948933
Ensembl:ENSRNOT00000064724 ArrayExpress:F1M1L0 Uniprot:F1M1L0
Length = 408
Score = 218 (81.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 45/116 (38%), Positives = 60/116 (51%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGT--LETETFTPVCD 86
G C C +NT G C C PG++ D + P C+ C C+ G+ L + T CD
Sbjct: 163 GVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA-CKACSCHPVGSAILPFSSVT-FCD 220
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
G C CKP V G +CD+C VG++ GC+ CDC GS CDP+TG C+
Sbjct: 221 PSNGDCPCKPGVAGPHCDRCMVGYWGF-GDYGCRPCDC--AGS----CDPLTGDCI 269
Score = 201 (75.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 43/112 (38%), Positives = 60/112 (53%)
Query: 90 GQCS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSL-----NRT-CDPI 137
G C+ C+ + G +C +C+ G Y + + + CK+C C PVGS + T CDP
Sbjct: 163 GVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKACSCHPVGSAILPFSSVTFCDPS 222
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G C C+PGV G C+ C ++GF GC+PC C GS CDP +G C
Sbjct: 223 NGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS----CDPLTGDC 268
Score = 139 (54.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 49/176 (27%), Positives = 69/176 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
G C+ C +NT G C C P Y D +C C+C G +T F
Sbjct: 97 GKCM-CKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCN--GHADTCHFDINV 153
Query: 86 DQLTGQ-----CS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTC 134
+ +G C+ C+ + G +C +C+ G Y + + + CK+C C PVGS
Sbjct: 154 WEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKACSCHPVGS---AI 210
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
P + C P G C C+P G + C CM G C P C G
Sbjct: 211 LPFSSVTFCDPS-NGD-CP-CKP---GVAGPHCDRCMVGYWGFGDYGCRPC-DCAG 259
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 210 (79.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 46/117 (39%), Positives = 61/117 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPV--CD 86
G C C +NT G C C PG++ D + P C+ C C+ G+ F+ V CD
Sbjct: 357 GVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDA-CKSCSCHPVGSAVLP-FSSVTFCD 414
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCL 142
G C CKP V G +C++C VG++ G+ GC+ CDC GS CDP TG CL
Sbjct: 415 PSNGDCPCKPGVAGPHCERCMVGYWGF--GDYGCRPCDC--AGS----CDPHTGDCL 463
Score = 205 (77.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 48/141 (34%), Positives = 69/141 (48%)
Query: 64 DCEPCQC--YIPGT-LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NII 114
+C C+C + + + ++ G C+ C+ + G +C +C+ G Y
Sbjct: 328 ECRTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFS 387
Query: 115 SGEGCKSCDCDPVGSL-----NRT-CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
+ + CKSC C PVGS + T CDP G C C+PGV G CE C ++GF GC+
Sbjct: 388 APDACKSCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCERCMVGYWGFGDYGCR 447
Query: 169 PCMCDPIGSNSLQCDP-SGQC 188
PC C GS CDP +G C
Sbjct: 448 PCDC--AGS----CDPHTGDC 462
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 47/174 (27%), Positives = 68/174 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPCQC--YIPGT-LETETFT 82
G C+ C +NT G C C P Y D +C C+C + + +
Sbjct: 291 GKCI-CKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPNECRTCKCNGHADACHFDINVWE 349
Query: 83 PVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-----NIISGEGCKSCDCDPVGSLNRTCDP 136
++ G C+ C+ + G +C +C+ G Y + + CKSC C PVGS P
Sbjct: 350 ASGNRSGGVCNDCQHNTEGQHCQRCKPGFYWDLRRPFSAPDACKSCSCHPVGS---AVLP 406
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
+ C P G C C+P G + C+ CM G C P C G
Sbjct: 407 FSSVTFCDPS-NGD-CP-CKP---GVAGPHCERCMVGYWGFGDYGCRPC-DCAG 453
Score = 35 (17.4 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 138 TGQCLCRPGVTGTRCELC 155
+G+C C+ V G C
Sbjct: 502 SGKCECKEQVLGNSKAFC 519
>RGD|1565947 [details] [associations]
symbol:Ntn4 "netrin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=ISO] InterPro:IPR001134 PROSITE:PS50189 RGD:1565947
GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 PROSITE:PS51117
GeneTree:ENSGT00700000104042 GO:GO:0060668 IPI:IPI00359984
Ensembl:ENSRNOT00000007412 ArrayExpress:F1M4Q9 Uniprot:F1M4Q9
Length = 436
Score = 218 (81.8 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 45/116 (38%), Positives = 60/116 (51%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGT--LETETFTPVCD 86
G C C +NT G C C PG++ D + P C+ C C+ G+ L + T CD
Sbjct: 163 GVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA-CKACSCHPVGSAILPFSSVT-FCD 220
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
G C CKP V G +CD+C VG++ GC+ CDC GS CDP+TG C+
Sbjct: 221 PSNGDCPCKPGVAGPHCDRCMVGYWGF-GDYGCRPCDC--AGS----CDPLTGDCI 269
Score = 201 (75.8 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 43/112 (38%), Positives = 60/112 (53%)
Query: 90 GQCS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSL-----NRT-CDPI 137
G C+ C+ + G +C +C+ G Y + + + CK+C C PVGS + T CDP
Sbjct: 163 GVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKACSCHPVGSAILPFSSVTFCDPS 222
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G C C+PGV G C+ C ++GF GC+PC C GS CDP +G C
Sbjct: 223 NGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGS----CDPLTGDC 268
Score = 139 (54.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/176 (27%), Positives = 69/176 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
G C+ C +NT G C C P Y D +C C+C G +T F
Sbjct: 97 GKCM-CKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCN--GHADTCHFDINV 153
Query: 86 DQLTGQ-----CS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTC 134
+ +G C+ C+ + G +C +C+ G Y + + + CK+C C PVGS
Sbjct: 154 WEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKACSCHPVGS---AI 210
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
P + C P G C C+P G + C CM G C P C G
Sbjct: 211 LPFSSVTFCDPS-NGD-CP-CKP---GVAGPHCDRCMVGYWGFGDYGCRPC-DCAG 259
>UNIPROTKB|E1BGE0 [details] [associations]
symbol:E1BGE0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR011489
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:DAAA02043188
EMBL:DAAA02043189 EMBL:DAAA02043190 IPI:IPI00703880
Ensembl:ENSBTAT00000027771 Uniprot:E1BGE0
Length = 1572
Score = 227 (85.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 71/186 (38%), Positives = 92/186 (49%)
Query: 18 GPPSDILKSVAGTTGD-C-LKC-IYNTGG--PQCDTCL--PGYFGDAL--ALPKG-DCEP 67
GP + L AG G C L+C +N G P C PG++G A + P G
Sbjct: 1372 GPHCE-LACPAGRYGAACSLECSCHNHGACEPTSGACRCGPGFYGQACEHSCPPGFHGAG 1430
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCD 125
CQ T + + P CD ++GQC C + G C++ CE G + GEGC + CDC+
Sbjct: 1431 CQ----QTCQCQHGAP-CDPVSGQCLCPAGLHGQFCERGCEPGSF----GEGCGQQCDCE 1481
Query: 126 PVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCD 183
L CDP+TG CLC PG TGT C+L C+ +G GC C C G + CD
Sbjct: 1482 ----LGVPCDPVTGHCLCPPGRTGTTCDLGCRRGFFG---PGCALHCSC---GGGA-DCD 1530
Query: 184 P-SGQC 188
P SGQC
Sbjct: 1531 PVSGQC 1536
Score = 188 (71.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 61/191 (31%), Positives = 84/191 (43%)
Query: 19 PPSDILKSVAGTTGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEP-CQCYIPGTL 76
PP + + TG CL C G +C D C G+FG C+ C C G
Sbjct: 788 PPCEHGAACVPETGACL-CRPGFMGSRCQDACPAGWFGPG-------CQTQCSCANDG-- 837
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTC 134
+C +TG+CSC P G +C + C+ GH+ G C +C+C G + C
Sbjct: 838 -------LCHPVTGRCSCAPGWTGLSCQRACDSGHW----GPDCSFTCNCS-AG--HGGC 883
Query: 135 DPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC--P 189
D ++G C+C G G RCE C ++G GC + C C+ + CD SG C P
Sbjct: 884 DAVSGLCVCEAGYVGPRCEQRCPQGYFG---PGCGRQCQCE----HGAACDHVSGACTCP 936
Query: 190 ----GVFMNRA 196
G F RA
Sbjct: 937 AGWRGTFCERA 947
Score = 186 (70.5 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 58/175 (33%), Positives = 80/175 (45%)
Query: 31 TGDCLKCIYNTGGPQCDT-CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C G +C++ C P +FG+A A + CQC PG C +T
Sbjct: 1145 TGACL-CPPGWRGSRCESACPPSWFGEACA------QRCQCP-PGA--------ACHHVT 1188
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C C P G +C+Q C G + GE C + C C P G N+ C P +G C C PG
Sbjct: 1189 GECHCPPGFTGPSCEQACPPGTF----GERCGQQCHC-P-GE-NQACHPASGTCACAPGY 1241
Query: 148 TGTRCEL-CQPNHYGFSLD---GC-KPCMCDPIGSNSLQCDPSG--------QCP 189
G C+ C P +G + GC CD + + + +C P+G CP
Sbjct: 1242 HGAGCQQRCPPGRFGPGCELLCGCLNGGSCDAV-TGACRC-PAGFLGTDCSLACP 1294
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 54/158 (34%), Positives = 73/158 (46%)
Query: 49 CLPGYFGDAL--ALPK---GD-C-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
C PG+ G A P G+ C + CQC PG C +TG+C C P G
Sbjct: 1150 CPPGWRGSRCESACPPSWFGEACAQRCQCP-PGA--------ACHHVTGECHCPPGFTGP 1200
Query: 102 NCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPN 158
+C+Q C G + GE C + C C P G N+ C P +G C C PG G C+ C P
Sbjct: 1201 SCEQACPPGTF----GERCGQQCHC-P-GE-NQACHPASGTCACAPGYHGAGCQQRCPPG 1253
Query: 159 HYGFSLDGCKPCMCDPIGSNSLQCDP-SG--QCPGVFM 193
+G GC+ +C + S CD +G +CP F+
Sbjct: 1254 RFG---PGCE-LLCGCLNGGS--CDAVTGACRCPAGFL 1285
Score = 169 (64.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 57/171 (33%), Positives = 72/171 (42%)
Query: 33 DC-LKCIYNTGGPQCDT------CLPGYFGDALALPKGDCEP-C-QCYI-PGT---LETE 79
DC C + G CD C GY G P+ CE C Q Y PG + E
Sbjct: 869 DCSFTCNCSAGHGGCDAVSGLCVCEAGYVG-----PR--CEQRCPQGYFGPGCGRQCQCE 921
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
CD ++G C+C GT C++ C G + + G +CDC S CDP++
Sbjct: 922 -HGAACDHVSGACTCPAGWRGTFCERACPAGFFGVDCGH---ACDC----SAGVPCDPVS 973
Query: 139 GQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G CLC G G RC P H F + + C C N CDP GQC
Sbjct: 974 GSCLCPSGRQGPRCAQTCPAHM-FGHNCSQACSC----FNGASCDPVHGQC 1019
Score = 168 (64.2 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 46/130 (35%), Positives = 58/130 (44%)
Query: 49 CLPGYFGDALA--LPKGDCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD- 104
C PGY G P G P C+ + G L + CD +TG C C +GT+C
Sbjct: 1237 CAPGYHGAGCQQRCPPGRFGPGCEL-LCGCLNGGS----CDAVTGACRCPAGFLGTDCSL 1291
Query: 105 QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGF 162
C G + G GC C C G+ CDP+TG C C PG TG CE C N +G
Sbjct: 1292 ACPHGRF----GPGCAYVCGCGQ-GA---ACDPVTGSCSCPPGRTGVHCEHGCPQNRFGV 1343
Query: 163 SLDGCKPCMC 172
+ + C C
Sbjct: 1344 NCEHA--CSC 1351
Score = 167 (63.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 41/108 (37%), Positives = 53/108 (49%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD++TGQC C P G +C C G + G GC+ C P C P TG CLC
Sbjct: 752 CDRVTGQCLCPPGRTGDDCGADCPEGRW----GLGCQEI-CPPCEH-GAACVPETGACLC 805
Query: 144 RPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
RPG G+RC+ C +G GC+ C C +N C P +G+C
Sbjct: 806 RPGFMGSRCQDACPAGWFG---PGCQTQCSC----ANDGLCHPVTGRC 846
Score = 167 (63.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 57/174 (32%), Positives = 74/174 (42%)
Query: 33 DCLKCIYNTGGPQCDTCLPGYFGDALAL----PKG-DCEPCQCYIP----GTLETET--- 80
+CL ++ G P CL G D + P G + CQ P G L E
Sbjct: 1076 ECLPGVFEVGCPHSCGCLNGGLCDPHTVHCLCPAGWTGDKCQSSCPEGTFGVLCEERCAC 1135
Query: 81 -FTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPI 137
+ C +TG C C P G+ C+ C + GE C + C C P G+ C +
Sbjct: 1136 RWGAACHAVTGACLCPPGWRGSRCESACPPSWF----GEACAQRCQCPP-GA---ACHHV 1187
Query: 138 TGQCLCRPGVTGTRCE-LCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
TG+C C PG TG CE C P +G + C + C C P G N C P SG C
Sbjct: 1188 TGECHCPPGFTGPSCEQACPPGTFG---ERCGQQCHC-P-GENQA-CHPASGTC 1235
Score = 164 (62.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 50/134 (37%), Positives = 57/134 (42%)
Query: 46 CDTCLPGYFGDALALPKGDCEPC--QCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC 103
C L G F + P E C QC + E P CD +TG C C P GT C
Sbjct: 1452 CPAGLHGQFCERGCEPGSFGEGCGQQC------DCELGVP-CDPVTGHCLCPPGRTGTTC 1504
Query: 104 DQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG 161
D C G + G GC C C G + CDP++GQCLC G TG C Q H G
Sbjct: 1505 DLGCRRGFF----GPGCALHCSCG--GGAD--CDPVSGQCLCVDGYTGPTCR--QAVHTG 1554
Query: 162 FSLDGCK---PCMC 172
SL C C C
Sbjct: 1555 TSLLACAHVHTCAC 1568
Score = 163 (62.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 45/123 (36%), Positives = 55/123 (44%)
Query: 85 CDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
CD +TG C C P V G +C D C G Y G+ C K C C G C + G CL
Sbjct: 577 CDPVTGACRCPPGVGGAHCEDGCPKGFY----GKHCRKKCHCANRGR----CHRLYGACL 628
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQCPGVFMNRAEMS 199
C PG+ G C L C P +G GC + C C+ N+ CD G C R E
Sbjct: 629 CDPGLYGRFCHLACPPWAFG---PGCSEECKCEQ--QNTRACDKRDGSCACKAGFRGEWC 683
Query: 200 SDD 202
D+
Sbjct: 684 QDE 686
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 59/181 (32%), Positives = 73/181 (40%)
Query: 35 LKCIYNTGGPQCDT------CLPGYFGD--ALALPKGDCEPCQCYIPGTLETETFTPVCD 86
L C GG CD C G+ G +LA P G P Y+ G + CD
Sbjct: 1261 LLCGCLNGG-SCDAVTGACRCPAGFLGTDCSLACPHGRFGPGCAYVCGCGQGAA----CD 1315
Query: 87 QLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCR 144
+TG CSC P G +C+ C + G C+ +C C G L C G C C
Sbjct: 1316 PVTGSCSCPPGRTGVHCEHGCPQNRF----GVNCEHACSCRN-GGL---CHATNGSCSCG 1367
Query: 145 PGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC---PGVFMNRAEM 198
G TG CEL C YG + C C C G+ C+P SG C PG + E
Sbjct: 1368 LGWTGPHCELACPAGRYGAA---CSLECSCHNHGA----CEPTSGACRCGPGFYGQACEH 1420
Query: 199 S 199
S
Sbjct: 1421 S 1421
Score = 157 (60.3 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 53/161 (32%), Positives = 66/161 (40%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKG----DC-EPCQCYIPGTLETETFTPVCDQLTGQ 91
C + +G C G F + A P G DC C C P CD ++G
Sbjct: 926 CDHVSGACTCPAGWRGTFCER-ACPAGFFGVDCGHACDC--------SAGVP-CDPVSGS 975
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C C G C Q H + G C ++C C S CDP+ GQC C PG TG
Sbjct: 976 CLCPSGRQGPRCAQTCPAH---MFGHNCSQACSCFNGAS----CDPVHGQCRCGPGWTGP 1028
Query: 151 RC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C + C YG + C+ C+C GS CDP SG C
Sbjct: 1029 TCLQACPEGLYG---EDCQHSCLCQNGGS----CDPVSGHC 1062
Score = 153 (58.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 52/162 (32%), Positives = 68/162 (41%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G CL C G C C P FG P G E C+C E + T CD+ G
Sbjct: 625 GACL-CDPGLYGRFCHLACPPWAFG-----P-GCSEECKC------EQQN-TRACDKRDG 670
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQC--LCRPG 146
C+CK G C D+C+ G + G GC+ +C C P CDP++G+C C G
Sbjct: 671 SCACKAGFRGEWCQDECQPGFF----GPGCRQACTCPP----GVACDPVSGECGKQCPAG 722
Query: 147 VTGTRC-ELCQPNHYGFSLDG---CKPCMCDPIGSNSLQCDP 184
G C + C +G + G C CD + L C P
Sbjct: 723 YHGEDCGQECPAGTFGQNCSGSCSCGDAPCDRVTGQCL-CPP 763
Score = 153 (58.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 54/168 (32%), Positives = 67/168 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL 88
T D C G C +TC P FG +C C C GT CD +
Sbjct: 537 TLDSCDCPDGWTGLVCNETCPPDTFGK-------NCSFSCSCQNGGT---------CDPV 580
Query: 89 TGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPG 146
TG C C P V G +C D C G Y G+ C K C C G C + G CLC PG
Sbjct: 581 TGACRCPPGVGGAHCEDGCPKGFY----GKHCRKKCHCANRGR----CHRLYGACLCDPG 632
Query: 147 VTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSL-QCDPSGQCPGVF 192
+ G C L C P + F + C C+ + + + D S C F
Sbjct: 633 LYGRFCHLACPP--WAFGPGCSEECKCEQQNTRACDKRDGSCACKAGF 678
Score = 152 (58.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 38/109 (34%), Positives = 50/109 (45%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
C +L G C C P + G C C + G GC + C C+ + R CD G C
Sbjct: 620 CHRLYGACLCDPGLYGRFCHLACPPWAF----GPGCSEECKCEQQNT--RACDKRDGSCA 673
Query: 143 CRPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C+ G G C+ CQP +G GC+ C C P + CDP SG+C
Sbjct: 674 CKAGFRGEWCQDECQPGFFG---PGCRQACTCPP----GVACDPVSGEC 715
Score = 145 (56.1 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 52/171 (30%), Positives = 69/171 (40%)
Query: 33 DCL-KCIYNTGGPQCD------TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP-V 84
DC C+ GG CD TC G+ G LA K +C P + +
Sbjct: 1042 DCQHSCLCQNGG-SCDPVSGHCTCPEGWAG--LACEK-ECLPGVFEVGCPHSCGCLNGGL 1097
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD T C C G C C G + ++ E C +C G+ C +TG CLC
Sbjct: 1098 CDPHTVHCLCPAGWTGDKCQSSCPEGTFGVLCEERC-ACRW---GA---ACHAVTGACLC 1150
Query: 144 RPGVTGTRCE-LCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQCPGVF 192
PG G+RCE C P+ +G + C + C C P G+ CP F
Sbjct: 1151 PPGWRGSRCESACPPSWFG---EACAQRCQCPP-GAACHHVTGECHCPPGF 1197
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 40/123 (32%), Positives = 49/123 (39%)
Query: 79 ETFTPVCDQLTGQC----SCKPHVVGTNCDQCEVGHYNIISGEGC------KSCDCDPVG 128
+TF P C C +C P + +CD C G ++ E C K+C
Sbjct: 515 DTFGPDCSLTCDDCRNGGTCLPTL--DSCD-CPDGWTGLVCNETCPPDTFGKNCSFSCSC 571
Query: 129 SLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGS-----NSLQ 181
TCDP+TG C C PGV G CE C YG C K C C G +
Sbjct: 572 QNGGTCDPVTGACRCPPGVGGAHCEDGCPKGFYG---KHCRKKCHCANRGRCHRLYGACL 628
Query: 182 CDP 184
CDP
Sbjct: 629 CDP 631
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 218 (81.8 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 46/141 (32%), Positives = 71/141 (50%)
Query: 64 DCEPCQCYIPGT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNII----- 114
+C+ C+C + + + ++ G C +C+ + G +C +C+ G Y +
Sbjct: 261 ECQSCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFS 320
Query: 115 SGEGCKSCDCDPVGSLN-----RT-CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
+ + CK C C P+GS RT CDP TG C C+PGV G RC+ C P ++GF GC+
Sbjct: 321 APDACKPCSCHPLGSAALPLGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGTSGCR 380
Query: 169 PCMCDPIGSNSLQCDP-SGQC 188
PC C + C P +G C
Sbjct: 381 PCDC------ARSCHPLTGDC 395
Score = 213 (80.0 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 45/117 (38%), Positives = 58/117 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGT----LETETFTPV 84
G C C +NT G C C PG++ D + P C+PC C+ G+ L TF
Sbjct: 290 GVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA-CKPCSCHPLGSAALPLGPRTF--- 345
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQC 141
CD TG C CKP V G CD+C G++ GC+ CDC R+C P+TG C
Sbjct: 346 CDPSTGDCPCKPGVAGPRCDRCLPGYWGF-GTSGCRPCDCA------RSCHPLTGDC 395
Score = 149 (57.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 49/174 (28%), Positives = 71/174 (40%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPCQCYIPGTLET-----ET 80
G C+ C +NT GP C C P Y D +C+ C+C G +T +
Sbjct: 224 GKCM-CKHNTAGPHCQHCAPLYNDRPWQAADGKTGAPRECQSCKCN--GHADTCHFDMDA 280
Query: 81 FTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTC 134
+ ++ G C +C+ + G +C +C+ G Y + + + CK C C P+GS
Sbjct: 281 WLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDACKPCSCHPLGSAALPL 340
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
P T C P TG C C+P G D C P S CD + C
Sbjct: 341 GPRT---FCDPS-TGD-CP-CKPGVAGPRCDRCLPGYWGFGTSGCRPCDCARSC 388
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 188 (71.2 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 45/134 (33%), Positives = 65/134 (48%)
Query: 62 KGDCEP-CQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE-- 117
+G P C+CY G ++ + +T C SCK + G +C C +G+Y S E
Sbjct: 411 EGSAGPDCECY--GHSNRCSYIDFLNVVT--CVSCKHNTRGQHCQHCRLGYYRNGSAELD 466
Query: 118 ---GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDP 174
C C+C+ +GS++ C+ TG C CR G G +C+ C P HY GC P +CD
Sbjct: 467 DENVCIECNCNQIGSVHDRCNE-TGFCECREGAAGPKCDDCLPTHYW--RQGCYPNVCD- 522
Query: 175 IGSNSLQCDPSGQC 188
+ L C G C
Sbjct: 523 --DDQLLCQNGGTC 534
Score = 161 (61.7 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 45/132 (34%), Positives = 57/132 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYF--GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C C GY+ G A + C C C G++ C++ TG
Sbjct: 438 CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDR-----CNE-TGF 491
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGC--KSCDCDPVGSLNR-TCDPITGQ-CLCRPGV 147
C C+ G CD C HY +GC CD D + N TC + Q C C G
Sbjct: 492 CECREGAAGPKCDDCLPTHY---WRQGCYPNVCDDDQLLCQNGGTC--VQNQRCACPRGY 546
Query: 148 TGTRCEL--CQP 157
TG RCE C P
Sbjct: 547 TGARCEQPRCDP 558
Score = 54 (24.1 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPC 68
L SV + C +C +NT GP C C + G L LP G C
Sbjct: 295 LCSVREGSLQC-ECEHNTTGPDCGKCKRSFRTRSWRAGSYLPLPHGSPNAC 344
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 218 (81.8 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 46/141 (32%), Positives = 71/141 (50%)
Query: 64 DCEPCQCYIPGT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNII----- 114
+C+ C+C + + + ++ G C +C+ + G +C +C+ G Y +
Sbjct: 302 ECQSCKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFS 361
Query: 115 SGEGCKSCDCDPVGSLN-----RT-CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
+ + CK C C P+GS RT CDP TG C C+PGV G RC+ C P ++GF GC+
Sbjct: 362 APDACKPCSCHPLGSAALPLGPRTFCDPSTGDCPCKPGVAGPRCDRCLPGYWGFGTSGCR 421
Query: 169 PCMCDPIGSNSLQCDP-SGQC 188
PC C + C P +G C
Sbjct: 422 PCDC------ARSCHPLTGDC 436
Score = 214 (80.4 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 56/166 (33%), Positives = 78/166 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGT----LETETFTPV 84
G C C +NT G C C PG++ D + P C+PC C+ G+ L TF
Sbjct: 331 GVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDA-CKPCSCHPLGSAALPLGPRTF--- 386
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
CD TG C CKP V G CD+C G++ GC+ CDC R+C P+TG C
Sbjct: 387 CDPSTGDCPCKPGVAGPRCDRCLPGYWGF-GTSGCRPCDCA------RSCHPLTGDCHSS 439
Query: 145 PGVTGTRCELCQPNHYGFSLDGCKPCMC--DPIGSNSLQCDPSGQC 188
V + + P + +L+ KP D G ++L+ SG+C
Sbjct: 440 SSVDASWQQEVLP--FQPTLNESKPAWGWEDEQGFSALR--HSGKC 481
Score = 149 (57.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 49/174 (28%), Positives = 71/174 (40%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPCQCYIPGTLET-----ET 80
G C+ C +NT GP C C P Y D +C+ C+C G +T +
Sbjct: 265 GKCM-CKHNTAGPHCQHCAPLYNDRPWQAADGKTGAPRECQSCKCN--GHADTCHFDMDA 321
Query: 81 FTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTC 134
+ ++ G C +C+ + G +C +C+ G Y + + + CK C C P+GS
Sbjct: 322 WLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAPDACKPCSCHPLGSAALPL 381
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
P T C P TG C C+P G D C P S CD + C
Sbjct: 382 GPRT---FCDPS-TGD-CP-CKPGVAGPRCDRCLPGYWGFGTSGCRPCDCARSC 429
>MGI|MGI:1888978 [details] [associations]
symbol:Ntn4 "netrin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0016322 "neuron
remodeling" evidence=IDA] [GO:0043237 "laminin-1 binding"
evidence=IDA] [GO:0060668 "regulation of branching involved in
salivary gland morphogenesis by extracellular matrix-epithelial
cell signaling" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
MGI:MGI:1888978 GO:GO:0016322 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 GO:GO:0043237 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:59277 eggNOG:NOG329215
HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK GO:GO:0060668
EMBL:AF268066 EMBL:AF281278 EMBL:AC124585 EMBL:AC151976
IPI:IPI00119840 RefSeq:NP_067295.2 UniGene:Mm.483868
ProteinModelPortal:Q9JI33 SMR:Q9JI33 STRING:Q9JI33
PhosphoSite:Q9JI33 PRIDE:Q9JI33 Ensembl:ENSMUST00000020204
GeneID:57764 KEGG:mmu:57764 HOGENOM:HOG000060085 InParanoid:Q9JI33
OrthoDB:EOG4M0F17 NextBio:313932 Bgee:Q9JI33 CleanEx:MM_NTN4
Genevestigator:Q9JI33 GermOnline:ENSMUSG00000020019 Uniprot:Q9JI33
Length = 628
Score = 218 (81.8 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 46/117 (39%), Positives = 62/117 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGT--LETETFTPVCD 86
G C C +NT G C C PG++ D + P C+ C C+ G+ L + T CD
Sbjct: 357 GVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA-CKACSCHPVGSAILPFSSVT-FCD 414
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCL 142
G C CKP V G +CD+C VG++ G+ GC+ CDC GS CDP+TG C+
Sbjct: 415 PSNGDCPCKPGVAGPHCDRCMVGYWGF--GDYGCRPCDC--AGS----CDPLTGDCI 463
Score = 202 (76.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 46/141 (32%), Positives = 69/141 (48%)
Query: 64 DCEPCQCYIPGT---LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNII----- 114
+C C+C + + ++ G C+ C+ + G +C +C+ G Y +
Sbjct: 328 ECRTCKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFS 387
Query: 115 SGEGCKSCDCDPVGSL-----NRT-CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
+ + CK+C C PVGS + T CDP G C C+PGV G C+ C ++GF GC+
Sbjct: 388 APDACKACSCHPVGSAILPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCR 447
Query: 169 PCMCDPIGSNSLQCDP-SGQC 188
PC C GS CDP +G C
Sbjct: 448 PCDC--AGS----CDPLTGDC 462
Score = 139 (54.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 49/176 (27%), Positives = 69/176 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
G C+ C +NT G C C P Y D +C C+C G +T F
Sbjct: 291 GRCM-CKHNTAGSHCQHCAPLYNDRPWEAADGRTGAPNECRTCKCN--GHADTCHFDVNV 347
Query: 86 DQLTGQ-----CS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTC 134
+ +G C+ C+ + G +C +C+ G Y + + + CK+C C PVGS
Sbjct: 348 WEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKACSCHPVGS---AI 404
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
P + C P G C C+P G + C CM G C P C G
Sbjct: 405 LPFSSVTFCDPS-NGD-CP-CKP---GVAGPHCDRCMVGYWGFGDYGCRPC-DCAG 453
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 219 (82.2 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 54/172 (31%), Positives = 74/172 (43%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYF----GDALALPKGDCEPCQCY 71
C G S +G +C +C +NT G C+ C P +F A A +C+ C C
Sbjct: 315 CNGHASKCSTDASGQL-NC-ECSHNTAGRDCERCKPFHFDRPWARATAKEANECKECNCN 372
Query: 72 IPGT---LETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSC 122
E F G C +C+ G NC QC+ G Y + + CK+C
Sbjct: 373 KHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKAC 432
Query: 123 DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDP 174
DC P+GS + C+ +GQC C+ GVTG C C Y S PC+ P
Sbjct: 433 DCHPIGSSGKICNSTSGQCPCKDGVTGLTCNRCARG-YQQSRSHIAPCIKQP 483
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 185 (70.2 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE-----GCKS 121
C+CY G ++ + +T C SCK + G +C C +G+Y S E C
Sbjct: 355 CECY--GHSNRCSYIDFLNVVT--CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIE 410
Query: 122 CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQ 181
C+C+ +GS++ C+ TG C CR G G +C+ C P HY GC P +CD + L
Sbjct: 411 CNCNQIGSVHDRCNE-TGFCECREGAAGPKCDDCLPTHYW--RQGCYPNVCD---DDQLL 464
Query: 182 CDPSGQC 188
C G C
Sbjct: 465 CQNGGTC 471
Score = 162 (62.1 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 47/140 (33%), Positives = 59/140 (42%)
Query: 34 CLKCIYNTGGPQCDTCLPGYF--GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C C GY+ G A + C C C G++ C++ TG
Sbjct: 375 CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDR-----CNE-TGF 428
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGC--KSCDCDPVGSLNR-TCDPITGQ-CLCRPGV 147
C C+ G CD C HY +GC CD D + N TC + Q C C G
Sbjct: 429 CECREGAAGPKCDDCLPTHY---WRQGCYPNVCDDDQLLCQNGGTC--VQNQRCTCPRGY 483
Query: 148 TGTRCEL--CQPNHYGFSLD 165
TG RCE C P LD
Sbjct: 484 TGVRCEQPRCDPADDDSGLD 503
Score = 54 (24.1 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 24 LKSVAGTTGDCLKCIYNTGGPQCDTCLPGY------FGDALALPKGDCEPC 68
L SV + C +C +NT GP C C + G L LP G C
Sbjct: 232 LCSVREGSLQC-ECDHNTTGPDCGKCKRSFRTRSWRAGSYLPLPHGSPNAC 281
>UNIPROTKB|E2QZY0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277 KO:K06845
OMA:RSQDFGK EMBL:AAEX03009952 EMBL:AAEX03009953 RefSeq:XP_532655.2
Ensembl:ENSCAFT00000010328 GeneID:475431 KEGG:cfa:475431
Uniprot:E2QZY0
Length = 628
Score = 217 (81.4 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 46/117 (39%), Positives = 62/117 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPV--CD 86
G C C +NT G C C PG++ D + P C+ C C+ G+ F+ V CD
Sbjct: 357 GVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA-CKMCSCHPVGSAALP-FSSVTFCD 414
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQCL 142
G C CKP V G +CD+C VG++ G+ GC+ CDC GS CDP+TG C+
Sbjct: 415 PSNGDCPCKPGVAGPHCDRCMVGYWGF--GDYGCRPCDC--AGS----CDPLTGDCI 463
Score = 202 (76.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 48/144 (33%), Positives = 70/144 (48%)
Query: 61 PKGDCEPCQCYIPGT---LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNII-- 114
PK +C C+C + + ++ G C+ C+ + G +C +C+ G Y +
Sbjct: 326 PK-ECRTCKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRR 384
Query: 115 ---SGEGCKSCDCDPVGSL-----NRT-CDPITGQCLCRPGVTGTRCELCQPNHYGFSLD 165
+ + CK C C PVGS + T CDP G C C+PGV G C+ C ++GF
Sbjct: 385 PFSAPDACKMCSCHPVGSAALPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDY 444
Query: 166 GCKPCMCDPIGSNSLQCDP-SGQC 188
GC+PC C GS CDP +G C
Sbjct: 445 GCRPCDC--AGS----CDPLTGDC 462
Score = 137 (53.3 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 51/177 (28%), Positives = 70/177 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDA-LALPKGDCEPCQCYIPGTLETETFTPV 84
G C+ C +NT G C C P Y D PK +C C+C G +T F
Sbjct: 291 GKCM-CKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPK-ECRTCKCN--GHADTCHFDIN 346
Query: 85 CDQLTGQ-----CS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRT 133
+ +G C+ C+ + G +C +C+ G Y + + + CK C C PVGS
Sbjct: 347 VWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKMCSCHPVGS---A 403
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
P + C P G C C+P G + C CM G C P C G
Sbjct: 404 ALPFSSVTFCDPS-NGD-CP-CKP---GVAGPHCDRCMVGYWGFGDYGCRPC-DCAG 453
>UNIPROTKB|F1RIQ1 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:CU929759 Ensembl:ENSSSCT00000003491 Uniprot:F1RIQ1
Length = 489
Score = 214 (80.4 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 51/162 (31%), Positives = 73/162 (45%)
Query: 36 KCIYNTGGPQCDTCLPGY--FGDALALPKGD--CEPCQCYIPGT---LETETFTPVCDQL 88
+C ++T GP C++C P + + A P+ C PC C +E F Q
Sbjct: 176 RCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPCLPCSCNQHARRCRFNSELFRLSGGQS 235
Query: 89 TGQCS-CKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
G C C+ H G +C C+ G + I S + C++C C P+G+ TC+ +GQC
Sbjct: 236 GGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSRKACRACQCHPIGATGGTCNQTSGQCS 295
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
C+ GVTG C C P Y S PC P + L P
Sbjct: 296 CKIGVTGLTCNRCGPG-YQQSHSPRMPCQRIPEATTMLATTP 336
Score = 141 (54.7 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 21 SDILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDALA--LPKGDCEPCQCYIPGTLE 77
S++ + G +G C +C ++T G C C PG++ D + C CQC+ G
Sbjct: 225 SELFRLSGGQSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPITSRKACRACQCHPIGATG 284
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGH 110
C+Q +GQCSCK V G C++C G+
Sbjct: 285 G-----TCNQTSGQCSCKIGVTGLTCNRCGPGY 312
>UNIPROTKB|F1SQR3 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060668 "regulation of branching involved in salivary
gland morphogenesis by extracellular matrix-epithelial cell
signaling" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 EMBL:CU442719 RefSeq:XP_003481795.1
Ensembl:ENSSSCT00000000980 GeneID:100516554 KEGG:ssc:100516554
Uniprot:F1SQR3
Length = 628
Score = 216 (81.1 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 47/116 (40%), Positives = 61/116 (52%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPV--CD 86
G C C +NT G C C PG++ D + P C+ C C+ G+ F+ V CD
Sbjct: 357 GVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA-CKLCSCHPVGSAVLP-FSSVTFCD 414
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGE-GCKSCDCDPVGSLNRTCDPITGQC 141
G C CKP V G +CD+C VG++ GE GC+ CDC GS CDP+TG C
Sbjct: 415 PSNGDCPCKPGVAGPHCDRCMVGYWGF--GEYGCRPCDC--AGS----CDPLTGDC 462
Score = 203 (76.5 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 48/144 (33%), Positives = 71/144 (49%)
Query: 61 PKGDCEPCQC--YIPGT-LETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNII-- 114
PK +C C+C + + + ++ G C+ C+ + G +C +C+ G Y +
Sbjct: 326 PK-ECRTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRR 384
Query: 115 ---SGEGCKSCDCDPVGSL-----NRT-CDPITGQCLCRPGVTGTRCELCQPNHYGFSLD 165
+ + CK C C PVGS + T CDP G C C+PGV G C+ C ++GF
Sbjct: 385 PFSAPDACKLCSCHPVGSAVLPFSSVTFCDPSNGDCPCKPGVAGPHCDRCMVGYWGFGEY 444
Query: 166 GCKPCMCDPIGSNSLQCDP-SGQC 188
GC+PC C GS CDP +G C
Sbjct: 445 GCRPCDC--AGS----CDPLTGDC 462
Score = 135 (52.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 48/175 (27%), Positives = 69/175 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGY------FGDA-LALPKGDCEPCQC--YIPGT-LETETF 81
G C+ C +NT G C C P Y D PK +C C+C + + +
Sbjct: 291 GKCM-CKHNTAGTHCQHCAPLYNDRPWEAADGKTGSPK-ECRTCKCNGHADACHFDINVW 348
Query: 82 TPVCDQLTGQCS-CKPHVVGTNCDQCEVGHYNII-----SGEGCKSCDCDPVGSLNRTCD 135
++ G C+ C+ + G +C +C+ G Y + + + CK C C PVGS
Sbjct: 349 EASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPFSAPDACKLCSCHPVGS---AVL 405
Query: 136 PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPG 190
P + C P G C C+P G + C CM G C P C G
Sbjct: 406 PFSSVTFCDPS-NGD-CP-CKP---GVAGPHCDRCMVGYWGFGEYGCRPC-DCAG 453
>ZFIN|ZDB-GENE-070112-1202 [details] [associations]
symbol:zgc:158328 "zgc:158328" species:7955 "Danio
rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-070112-1202 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 Pfam:PF12661
HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:BC129204
IPI:IPI00829071 RefSeq:NP_001073658.1 UniGene:Dr.95104
ProteinModelPortal:A1L1T4 STRING:A1L1T4 GeneID:567225
KEGG:dre:567225 InParanoid:A1L1T4 NextBio:20888577 Uniprot:A1L1T4
Length = 1339
Score = 220 (82.5 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 69/181 (38%), Positives = 85/181 (46%)
Query: 27 VAGTTG-DC-LKCIYNTGGPQCD------TCLPGYFGDALA--LPKGD----C-EPCQCY 71
V+G G +C KC+ G CD +C GY+G A P G C +PC C
Sbjct: 1150 VSGHYGVNCEQKCVCQNNGT-CDRFTGCCSCPSGYYGPACQHRCPAGFFGELCAQPCVCK 1208
Query: 72 IPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGS 129
G CD +TG+C C P G C++ CE G + G C CDCD G+
Sbjct: 1209 -QGHQ--------CDHVTGKCECPPGYHGNQCEKRCESGRF----GRDCAGVCDCD--GA 1253
Query: 130 LNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQ 187
+CDP TGQCLC PG TG RCE +C +YG D C C G QCDP +G
Sbjct: 1254 ---SCDPTTGQCLCPPGKTGERCEKVCDSRYYG--PDCSFQCECVHGG----QCDPQTGH 1304
Query: 188 C 188
C
Sbjct: 1305 C 1305
Score = 202 (76.2 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 64/185 (34%), Positives = 84/185 (45%)
Query: 23 ILKSVAGTTGD-CLK-CIYNTGGPQCD------TCLPGYFGD--ALALPKG----DC-EP 67
+L+ GT G C K C GG +CD C PGYFG +++ P G DC +
Sbjct: 1017 LLRCREGTYGPYCKKRCSCANGG-RCDFRNGSCICQPGYFGPNCSISCPSGHYGRDCAQV 1075
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCD 125
C C G C TG+C+C P G +C+Q C G Y G C+S C C
Sbjct: 1076 CSCGEKGQ---------CHPETGRCNCAPGTTGLSCEQMCPRGRY----GVQCRSFCTCA 1122
Query: 126 PVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
G CDP+ G C C G TG CE +C HYG + + + C+C G+ CD
Sbjct: 1123 NGG----VCDPVNGTCRCGLGWTGQHCEKVCVSGHYGVNCE--QKCVCQNNGT----CDR 1172
Query: 185 -SGQC 188
+G C
Sbjct: 1173 FTGCC 1177
Score = 198 (74.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/193 (34%), Positives = 87/193 (45%)
Query: 19 PPSDILKSVAGTTG-DCLK-CIYNTGGPQCD------TCLPGYFGDALALPKGDCEPCQC 70
PP IL AGT G +C + C + GG CD +C PG+ GD + C
Sbjct: 883 PPHCILACPAGTFGLNCSQSCDCHNGG-SCDPVSGQCSCAPGWTGDRC---QQTC--ASG 936
Query: 71 YIPGTLETETFTPV---CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCD 125
+ E + PV CD +TG+C C G +C++ C G + G C + C C
Sbjct: 937 WFGKNCEQKCICPVGVACDHVTGRCGCPAGYTGNSCEKMCPQGRF----GLNCSRVCSCS 992
Query: 126 PVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCD 183
G R C ITG+C C+PG G RC L C+ YG CK C C +N +CD
Sbjct: 993 --GDQYR-CHHITGRCSCQPGYNGNRCLLRCREGTYG---PYCKKRCSC----ANGGRCD 1042
Query: 184 -PSGQC---PGVF 192
+G C PG F
Sbjct: 1043 FRNGSCICQPGYF 1055
Score = 195 (73.7 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 60/174 (34%), Positives = 73/174 (41%)
Query: 27 VAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALP--KGDCEP-----CQCYIPGTLETE 79
V +GD +C + TG +C +C PGY G+ L +G P C C G
Sbjct: 988 VCSCSGDQYRCHHITG--RC-SCQPGYNGNRCLLRCREGTYGPYCKKRCSCANGGR---- 1040
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPI 137
CD G C C+P G NC C GHY G C C C G C P
Sbjct: 1041 -----CDFRNGSCICQPGYFGPNCSISCPSGHY----GRDCAQVCSCGEKGQ----CHPE 1087
Query: 138 TGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
TG+C C PG TG CE +C YG C+ C C +N CDP +G C
Sbjct: 1088 TGRCNCAPGTTGLSCEQMCPRGRYGVQ---CRSFCTC----ANGGVCDPVNGTC 1134
Score = 182 (69.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 60/182 (32%), Positives = 80/182 (43%)
Query: 25 KSVAGTTG-DCLKCIYNTGGPQCD------TCLPGYFGDALA--LPKG----DC-EPCQC 70
K G G DC + G +CD TC G+ G P G DC + CQC
Sbjct: 803 KCSEGLYGADCKQVCECENGAECDHVSGACTCAAGWVGSHCEKRCPVGFYGQDCAQMCQC 862
Query: 71 YIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVG 128
E C +TG C C P +C C G + G C +SCDC G
Sbjct: 863 ------RNEA---QCHHITGACRCTPGWAPPHCILACPAGTF----GLNCSQSCDCHNGG 909
Query: 129 SLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SG 186
S CDP++GQC C PG TG RC+ C +G + + + C+C P+G + CD +G
Sbjct: 910 S----CDPVSGQCSCAPGWTGDRCQQTCASGWFGKNCE--QKCIC-PVG---VACDHVTG 959
Query: 187 QC 188
+C
Sbjct: 960 RC 961
Score = 178 (67.7 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 58/174 (33%), Positives = 80/174 (45%)
Query: 36 KCIYNTGGPQCDTCLPGYFGD--ALALPKG----DC-EPCQCYIPGTLETETFTPVCDQL 88
+C + TG C C PG+ LA P G +C + C C+ G+ CD +
Sbjct: 867 QCHHITGA--C-RCTPGWAPPHCILACPAGTFGLNCSQSCDCHNGGS---------CDPV 914
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
+GQCSC P G C Q C G + G+ C+ C C PVG CD +TG+C C G
Sbjct: 915 SGQCSCAPGWTGDRCQQTCASGWF----GKNCEQKCIC-PVGV---ACDHVTGRCGCPAG 966
Query: 147 VTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFMNR 195
TG CE +C +G L+ + C C + +C +G+C PG NR
Sbjct: 967 YTGNSCEKMCPQGRFG--LNCSRVCSCS---GDQYRCHHITGRCSCQPGYNGNR 1015
Score = 166 (63.5 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 60/176 (34%), Positives = 76/176 (43%)
Query: 29 GTTG-DCLK-CIYNTGGPQCDT------CLPGYFGDALALPKGDCEPCQCYIPGTL-ETE 79
GT G +C C+ GG +CD C PG G L G C P Y G L
Sbjct: 587 GTYGAECNSLCVCKNGG-RCDPVTGKCLCPPGVHG--LHCENG-C-PQGFY--GRLCRRR 639
Query: 80 TFTPV---CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTC 134
P C +L G C C P + G C C + G GC + C+C SL+ C
Sbjct: 640 CNCPNNGHCHRLYGGCLCTPGLYGKFCHLPCPKWSH----GAGCSEECECVQENSLS--C 693
Query: 135 DPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
DP G CLC+PG G RC+ C ++G G C C S+ CDP +G+C
Sbjct: 694 DPQMGTCLCKPGYHGDRCQTDCDDGYFGVGCHGL--CNC----SDGKSCDPKTGEC 743
Score = 162 (62.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 56/177 (31%), Positives = 74/177 (41%)
Query: 28 AGTTGDCLKCIYNTG---GPQCDTCL--PGYFGDALALPKGDCEP----CQCYIPGTLET 78
AG + +C +C+ PQ TCL PGY GD + DC+ C+ G
Sbjct: 677 AGCSEEC-ECVQENSLSCDPQMGTCLCKPGYHGDRC---QTDCDDGYFGVGCH--GLCNC 730
Query: 79 ETFTPVCDQLTGQCS--CKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTC 134
CD TG+C C G C CE G + G GC + C C S +C
Sbjct: 731 SDGKS-CDPKTGECQRMCPAGYHGEKCQMVCEAGFW----GAGCANVCQC---ASNAVSC 782
Query: 135 DPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
+ +G+C+C G TG C+ C YG CK C C+ N +CD SG C
Sbjct: 783 ESSSGRCVCESGYTGQHCDKKCSEGLYGAD---CKQVCECE----NGAECDHVSGAC 832
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/81 (41%), Positives = 37/81 (45%)
Query: 84 VCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
VC +C C P G C D C G Y G C S C C G CDP+TG+C
Sbjct: 561 VCAAEKDRCVCPPGWTGLICNDTCPEGTY----GAECNSLCVCKNGGR----CDPVTGKC 612
Query: 142 LCRPGVTGTRCEL-CQPNHYG 161
LC PGV G CE C YG
Sbjct: 613 LCPPGVHGLHCENGCPQGFYG 633
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 39/122 (31%), Positives = 54/122 (44%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY--IPGTLETETFTPVCDQLTGQCS 93
+C + TG +C+ C PGY G+ + CE + G + + + CD TGQC
Sbjct: 1212 QCDHVTG--KCE-CPPGYHGNQC---EKRCESGRFGRDCAGVCDCDGAS--CDPTTGQCL 1263
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P G C++ C+ +Y G C C+C G CDP TG C C G
Sbjct: 1264 CPPGKTGERCEKVCDSRYY----GPDCSFQCECVHGGQ----CDPQTGHCSCPQTWLGPT 1315
Query: 152 CE 153
CE
Sbjct: 1316 CE 1317
>UNIPROTKB|Q8WTR8 [details] [associations]
symbol:NTN5 "Netrin-5" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH471177 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
HOGENOM:HOG000286017 EMBL:BC018654 EMBL:BC018697 EMBL:BC021210
EMBL:BC033207 IPI:IPI00102812 IPI:IPI00645833 RefSeq:NP_665806.1
UniGene:Hs.326217 ProteinModelPortal:Q8WTR8 SMR:Q8WTR8
DMDM:74730628 PaxDb:Q8WTR8 PRIDE:Q8WTR8 Ensembl:ENST00000270235
GeneID:126147 KEGG:hsa:126147 UCSC:uc002pkb.3 UCSC:uc002pkc.3
CTD:126147 GeneCards:GC19M049164 HGNC:HGNC:25208 neXtProt:NX_Q8WTR8
PharmGKB:PA164724232 eggNOG:NOG327968 HOVERGEN:HBG096704
InParanoid:Q8WTR8 OMA:GGPFLLT OrthoDB:EOG402WS1 GenomeRNAi:126147
NextBio:81704 Bgee:Q8WTR8 Genevestigator:Q8WTR8 Uniprot:Q8WTR8
Length = 489
Score = 213 (80.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 50/161 (31%), Positives = 72/161 (44%)
Query: 37 CIYNTGGPQCDTCLPGY--FGDALALPKGD--CEPCQCYIPGT---LETETFTPVCDQLT 89
C ++T GP C++C P + + A P+ C PC C +E F +
Sbjct: 177 CRHHTTGPGCESCRPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSG 236
Query: 90 GQCS-CKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
G C C+ H G +C C+ G + I S C++C C P+G+ TC+ +GQC C
Sbjct: 237 GVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATGGTCNQTSGQCTC 296
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
+ GVTG C C P Y S PC P + +L P
Sbjct: 297 KLGVTGLTCNRCGPG-YQQSRSPRMPCQRIPEATTTLATTP 336
Score = 139 (54.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 21 SDILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYFGDALA--LPKGDCEPCQCYIPGTLE 77
S++ + G +G C +C ++T G C C PG++ D + C CQC+ G
Sbjct: 225 SELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPSQPIFSRRACRACQCHPIGATG 284
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGH 110
C+Q +GQC+CK V G C++C G+
Sbjct: 285 G-----TCNQTSGQCTCKLGVTGLTCNRCGPGY 312
>UNIPROTKB|Q6VU69 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 UniGene:Hs.436367 DNASU:3909
GeneID:3909 KEGG:hsa:3909 CTD:3909 HGNC:HGNC:6483 PharmGKB:PA30272
KO:K06240 ChiTaRS:LAMA3 GenomeRNAi:3909 NextBio:15345
HOVERGEN:HBG100777 EMBL:AY327114 IPI:IPI00895830
RefSeq:NP_001121190.1 ProteinModelPortal:Q6VU69 STRING:Q6VU69
PRIDE:Q6VU69 Ensembl:ENST00000587184 UCSC:uc002kut.4
ArrayExpress:Q6VU69 Bgee:Q6VU69 Uniprot:Q6VU69
Length = 1668
Score = 219 (82.2 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 49/148 (33%), Positives = 71/148 (47%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C PGY+ D L G C PC C + C +G C +C+ + G +C++C+
Sbjct: 59 CSPGYYRDHKGLYTGRCVPCNC--------NGHSNQCQDGSGICVNCQHNTAGEHCERCQ 110
Query: 108 VGHY-NIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPNHYGF-- 162
G+Y N + G C++C C S C G +C C+ G TGT+CE C P ++G
Sbjct: 111 EGYYGNAVHGS-CRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQ 169
Query: 163 SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
G C+PC C+ G C P +G C
Sbjct: 170 KFGGSCQPCSCNSNGQLG-SCHPLTGDC 196
Score = 202 (76.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C GY+G+A+ G C C C P T +F C G
Sbjct: 91 SGICVNCQHNTAGEHCERCQEGYYGNAV---HGSCRACPC--P---HTNSFATGCVVNGG 142
Query: 91 --QCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+CSCK GT C++C G++ G C+ C C+ G L +C P+TG C+ +
Sbjct: 143 DVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQLG-SCHPLTGDCINQEP 201
Query: 147 VTGTRCELC 155
+ E C
Sbjct: 202 KDSSPAEEC 210
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 30/97 (30%), Positives = 40/97 (41%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C P ++ + G ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 125 CPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSN 183
Query: 74 GTLETETFTPVCDQLTGQC---SCKPHVVGTNCDQCE 107
G L + C LTG C K CD C+
Sbjct: 184 GQLGS------CHPLTGDCINQEPKDSSPAEECDDCD 214
>UNIPROTKB|B0YJ33 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 IPI:IPI00790908 RefSeq:NP_000218.2
UniGene:Hs.436367 DNASU:3909 GeneID:3909 KEGG:hsa:3909 CTD:3909
HGNC:HGNC:6483 PharmGKB:PA30272 KO:K06240 ChiTaRS:LAMA3
GenomeRNAi:3909 NextBio:15345 HOGENOM:HOG000048708 EMBL:EF444992
STRING:B0YJ33 Ensembl:ENST00000269217 UCSC:uc002kus.4
HOVERGEN:HBG100777 Uniprot:B0YJ33
Length = 1724
Score = 219 (82.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 49/148 (33%), Positives = 71/148 (47%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C PGY+ D L G C PC C + C +G C +C+ + G +C++C+
Sbjct: 59 CSPGYYRDHKGLYTGRCVPCNC--------NGHSNQCQDGSGICVNCQHNTAGEHCERCQ 110
Query: 108 VGHY-NIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPNHYGF-- 162
G+Y N + G C++C C S C G +C C+ G TGT+CE C P ++G
Sbjct: 111 EGYYGNAVHGS-CRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQ 169
Query: 163 SLDG-CKPCMCDPIGSNSLQCDP-SGQC 188
G C+PC C+ G C P +G C
Sbjct: 170 KFGGSCQPCSCNSNGQLG-SCHPLTGDC 196
Score = 202 (76.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
+G C+ C +NT G C+ C GY+G+A+ G C C C P T +F C G
Sbjct: 91 SGICVNCQHNTAGEHCERCQEGYYGNAV---HGSCRACPC--P---HTNSFATGCVVNGG 142
Query: 91 --QCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+CSCK GT C++C G++ G C+ C C+ G L +C P+TG C+ +
Sbjct: 143 DVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQLG-SCHPLTGDCINQEP 201
Query: 147 VTGTRCELC 155
+ E C
Sbjct: 202 KDSSPAEEC 210
Score = 118 (46.6 bits), Expect = 0.00048, P = 0.00048
Identities = 30/97 (30%), Positives = 40/97 (41%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIP 73
C P ++ + G ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 125 CPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFG-GSCQPCSCNSN 183
Query: 74 GTLETETFTPVCDQLTGQC---SCKPHVVGTNCDQCE 107
G L + C LTG C K CD C+
Sbjct: 184 GQLGS------CHPLTGDCINQEPKDSSPAEECDDCD 214
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 218 (81.8 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 47/147 (31%), Positives = 68/147 (46%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCE 107
C PGY+ D + P G PC C + C +G C +C+ + G +C++C+
Sbjct: 59 CRPGYYRDIKSFPAGRSVPCNC--------NGHSNRCQDGSGVCINCQHNTAGEHCERCK 110
Query: 108 VGHYNIISGEGCKSCDCDPVGSLNRTCDPITG--QCLCRPGVTGTRCELCQPNHYGF--S 163
G+Y C+ C C S C G +C C+PG TG +CE C P ++G
Sbjct: 111 RGYYGSAIHGSCRVCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQK 170
Query: 164 LDG-CKPCMCDPIGSNSLQCDP-SGQC 188
G C+PC C+ G CDP +G C
Sbjct: 171 FGGSCQPCNCNSNGQFGT-CDPLTGDC 196
Score = 217 (81.4 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 44/129 (34%), Positives = 64/129 (49%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC--DQL 88
+G C+ C +NT G C+ C GY+G A+ G C C C P T +F C D
Sbjct: 91 SGVCINCQHNTAGEHCERCKRGYYGSAI---HGSCRVCPC--P---HTNSFATGCAVDGG 142
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIIS--GEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+C+CKP G C++C G++ G C+ C+C+ G TCDP+TG C+ +
Sbjct: 143 AVRCACKPGYTGAQCERCAPGYFGNPQKFGGSCQPCNCNSNGQFG-TCDPLTGDCVSQEP 201
Query: 147 VTGTRCELC 155
G+ E C
Sbjct: 202 KDGSPAEEC 210
Score = 133 (51.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 15 LCVGPPSDILKSVAGTTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYI 72
+C P ++ + G ++C G G QC+ C PGYFG+ G C+PC C
Sbjct: 124 VCPCPHTNSFATGCAVDGGAVRCACKPGYTGAQCERCAPGYFGNPQKFG-GSCQPCNCNS 182
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
G T CD LTG C + G+ ++C+
Sbjct: 183 NGQFGT------CDPLTGDCVSQEPKDGSPAEECD 211
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 211 (79.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 53/176 (30%), Positives = 77/176 (43%)
Query: 25 KSVAGTTGDCL-KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGTLETE 79
K + T G + C + T GP C C P Y + A A C C C G
Sbjct: 263 KCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAHACLACSCN--GHARRC 320
Query: 80 TFTPVCDQLTGQ-----C-SCKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVG 128
F +L+G+ C +C+ + G +C C G Y + C++CDC PVG
Sbjct: 321 RFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVG 380
Query: 129 SLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
+ +TC+ TGQC C+ GVTG C C P + S PC+ P+ + + +P
Sbjct: 381 AAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGPTEESNP 435
>FB|FBgn0027594 [details] [associations]
symbol:drpr "draper" species:7227 "Drosophila melanogaster"
[GO:0007155 "cell adhesion" evidence=ISS] [GO:0008345 "larval
locomotory behavior" evidence=IMP] [GO:0006909 "phagocytosis"
evidence=IMP;TAS] [GO:0031224 "intrinsic to membrane" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016322 "neuron
remodeling" evidence=IMP] [GO:0035212 "cell competition in a
multicellular organism" evidence=IMP] [GO:0048190 "wing disc
dorsal/ventral pattern formation" evidence=IGI] [GO:0043277
"apoptotic cell clearance" evidence=IMP] [GO:0035071 "salivary
gland cell autophagic cell death" evidence=IMP] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0048190 EMBL:AE014296 GO:GO:0016322 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0008345 GO:GO:0035071
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0031224
GO:GO:0043277 Pfam:PF12661 GO:GO:0035212
GeneTree:ENSGT00690000101914 RefSeq:NP_728660.2 UniGene:Dm.3167
ProteinModelPortal:Q9W0A0 SMR:Q9W0A0 DIP:DIP-19640N
MINT:MINT-7555415 STRING:Q9W0A0 EnsemblMetazoa:FBtr0072799
GeneID:38218 KEGG:dme:Dmel_CG2086 UCSC:CG2086-RB CTD:38218
FlyBase:FBgn0027594 InParanoid:Q9W0A0 OMA:ALCDHIS OrthoDB:EOG4RXWF6
ChiTaRS:drpr GenomeRNAi:38218 NextBio:807575 Bgee:Q9W0A0
Uniprot:Q9W0A0
Length = 1031
Score = 214 (80.4 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 58/160 (36%), Positives = 76/160 (47%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET-ETFTPV-CDQLTGQCS 93
KC TG C+ PG+ GD A C P Y PG E+ E + C +TGQC
Sbjct: 238 KCQPETGACMCN---PGWTGDVCA---NKC-PVGSYGPGCQESCECYKGAPCHHITGQCE 290
Query: 94 CKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P G C D+C++ Y G C +CDC + + CD G C+C PG TG +
Sbjct: 291 CPPGYRGERCFDECQLNTY----GFNCSMTCDC----ANDAMCDRANGTCICNPGWTGAK 342
Query: 152 C--ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C +C+ N YG LD + C CD + L C P +G C
Sbjct: 343 CAERICEANKYG--LDCNRTCECD-MEHTDL-CHPETGNC 378
Score = 181 (68.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 61/197 (30%), Positives = 82/197 (41%)
Query: 15 LCVGPPSDILKSVAGTTGDCLK-CIYNTGGPQCD---TCLPG-----YFGDALALP--KG 63
LC + S+ ++ C + C + GP C+ C G G L P +G
Sbjct: 370 LCHPETGNCQCSIGWSSAQCTRPCTFLRYGPNCELTCNCKNGAKCSPVNGTCLCAPGWRG 429
Query: 64 D-CEPCQCYIPGTLETETFTPV-------CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNII 114
CE C PGT + C+ TGQC C CD+ C++ H+
Sbjct: 430 PTCEE-SCE-PGTFGQDCALRCDCQNGAKCEPETGQCLCTAGWKNIKCDRPCDLNHF--- 484
Query: 115 SGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMC 172
G+ C K CDC N C+P G C C G TG RCE C +G D + C C
Sbjct: 485 -GQDCAKVCDCHN----NAACNPQNGSCTCAAGWTGERCERKCDTGKFGH--DCAQKCQC 537
Query: 173 DPIGSNSLQCDPS-GQC 188
D +NSL CD + G+C
Sbjct: 538 D--FNNSLACDATNGRC 552
Score = 175 (66.7 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 58/168 (34%), Positives = 70/168 (41%)
Query: 33 DCLK---CIYNTG-GPQ---CDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLET 78
DC K C N PQ C TC G+ G+ G DC + CQC +L
Sbjct: 487 DCAKVCDCHNNAACNPQNGSC-TCAAGWTGERCERKCDTGKFGHDCAQKCQCDFNNSL-- 543
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDP 136
CD G+C CK G +C+ C G+Y GE C K C C N +CDP
Sbjct: 544 -----ACDATNGRCVCKQDWGGVHCETNCRSGYY----GENCDKVCRC----LNNSSCDP 590
Query: 137 ITGQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
+G C+C G TG C E C P YG CK C I + CD
Sbjct: 591 DSGNCICSAGWTGADCAEPCPPGFYGME---CKE-RCPEILHGNKSCD 634
Score = 167 (63.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 49/150 (32%), Positives = 67/150 (44%)
Query: 36 KCIYNTG-GPQCDTCL--PGYFGDALALPKGDCEP------CQCYIPGTLETETFTPVCD 86
+C+ N+ P C+ G+ G A P C P C+ P L CD
Sbjct: 581 RCLNNSSCDPDSGNCICSAGWTGADCAEP---CPPGFYGMECKERCPEILHGNKS---CD 634
Query: 87 QLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCR 144
+TG+ C+ +G C+ C G Y G GCK C+C+ G C+ +TGQC C
Sbjct: 635 HITGEILCRTGYIGLTCEHPCPAGLY----GPGCKLKCNCEHGGE----CNHVTGQCQCL 686
Query: 145 PGVTGTRC-ELCQPNHYGFSLDGC-KPCMC 172
PG TG+ C E C + YG GC + C C
Sbjct: 687 PGWTGSNCNESCPTDTYG---QGCAQRCRC 713
Score = 165 (63.1 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 53/158 (33%), Positives = 70/158 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-LETET-FTPVCDQLTGQCSC 94
C + TG C T GY G P C P Y PG L+ C+ +TGQC C
Sbjct: 633 CDHITGEILCRT---GYIGLTCEHP---C-PAGLYGPGCKLKCNCEHGGECNHVTGQCQC 685
Query: 95 KPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
P G+NC++ C Y G+GC + C C ++ C G C+C G +GTRC
Sbjct: 686 LPGWTGSNCNESCPTDTY----GQGCAQRCRCVH----HKVCRKADGMCICETGWSGTRC 737
Query: 153 -ELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQC 188
E+C YG + C C C P S + QC + C
Sbjct: 738 DEVCPEGFYG---EHCMNTCAC-P--SANFQCHAAHGC 769
Score = 147 (56.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/108 (37%), Positives = 51/108 (47%)
Query: 85 CDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD +G C C G +C + C G Y G CK C + N++CD ITG+ LC
Sbjct: 588 CDPDSGNCICSAGWTGADCAEPCPPGFY----GMECKE-RCPEILHGNKSCDHITGEILC 642
Query: 144 RPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
R G G CE C YG GCK C C+ G +C+ +GQC
Sbjct: 643 RTGYIGLTCEHPCPAGLYG---PGCKLKCNCEHGG----ECNHVTGQC 683
Score = 147 (56.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/165 (30%), Positives = 71/165 (43%)
Query: 31 TGDCLK-CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIP--GTLETET-FTPVCD 86
T DC + + C C PG+ G A + CE + + T E + T +C
Sbjct: 316 TCDCANDAMCDRANGTC-ICNPGWTGAKCA--ERICEANKYGLDCNRTCECDMEHTDLCH 372
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRP 145
TG C C +G + QC + G C+ +C+C G+ C P+ G CLC P
Sbjct: 373 PETGNCQCS---IGWSSAQCTRPCTFLRYGPNCELTCNCKN-GA---KCSPVNGTCLCAP 425
Query: 146 GVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G G CE C+P +G D C C N +C+P +GQC
Sbjct: 426 GWRGPTCEESCEPGTFG--QDCALRCDCQ----NGAKCEPETGQC 464
Score = 143 (55.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/165 (26%), Positives = 67/165 (40%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT-PVCDQLTGQCSCKPHVVGTN 102
P+ C GY G A + +C P +++ + VC+ +G C C G
Sbjct: 114 PEKCKCDHGYGGPACDI---NCPPGWYGRNCSMQCDCLNNAVCEPFSGDCECAKGYTGAR 170
Query: 103 C-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNH 159
C D C G + G C + C C+ G C ++G+C C PG TG C++ C
Sbjct: 171 CADICPEGFF----GANCSEKCRCENGGK----CHHVSGECQCAPGFTGPLCDMRCPDGK 222
Query: 160 YGFSLDGCKPCM----CDPIGSNSLQCDPSGQCPGVFMNRAEMSS 200
+G PC C P + + C+P G V N+ + S
Sbjct: 223 HGAQCQQDCPCQNDGKCQP-ETGACMCNP-GWTGDVCANKCPVGS 265
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/122 (35%), Positives = 53/122 (43%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT--PVCDQLTGQCS 93
+C + TG QC CLPG+ G C P Y G + VC + G C
Sbjct: 675 ECNHVTG--QCQ-CLPGWTGSNC---NESC-PTDTYGQGCAQRCRCVHHKVCRKADGMCI 727
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+ GT CD+ C G Y GE C +C C P S N C G C+CR G TG
Sbjct: 728 CETGWSGTRCDEVCPEGFY----GEHCMNTCAC-P--SANFQCHAAHG-CVCRSGYTGDN 779
Query: 152 CE 153
C+
Sbjct: 780 CD 781
Score = 130 (50.8 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 48/165 (29%), Positives = 64/165 (38%)
Query: 36 KCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSC 94
KC + GGP CD C PG++G ++ C C L VC+ +G C C
Sbjct: 118 KCDHGYGGPACDINCPPGWYGRNCSMQ------CDC-----LNNA----VCEPFSGDCEC 162
Query: 95 KPHVVGTNC-DQCEVGHYNIISGEGCKSCD----CDPVGSLNRTCDP-ITGQ-C--LCRP 145
G C D C G + E C+ C+ C V C P TG C C
Sbjct: 163 AKGYTGARCADICPEGFFGANCSEKCR-CENGGKCHHVSG-ECQCAPGFTGPLCDMRCPD 220
Query: 146 GVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
G G +C+ C + G CMC+P G C + +CP
Sbjct: 221 GKHGAQCQQDCPCQNDGKCQPETGACMCNP-GWTGDVC--ANKCP 262
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 47/175 (26%), Positives = 71/175 (40%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G+C+ C G C + C PG++G +C+ +C P L CD +T
Sbjct: 592 SGNCI-CSAGWTGADCAEPCPPGFYGM-------ECKE-RC--PEILHGNKS---CDHIT 637
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRT---CDPITG----Q 140
G+ C+ +G C+ C G Y G GCK C+C+ G N C + G
Sbjct: 638 GEILCRTGYIGLTCEHPCPAGLY----GPGCKLKCNCEHGGECNHVTGQCQCLPGWTGSN 693
Query: 141 C--LCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCPGVF 192
C C G C + C+ H+ C+C+ G + +CD CP F
Sbjct: 694 CNESCPTDTYGQGCAQRCRCVHHKVCRKADGMCICET-GWSGTRCDEV--CPEGF 745
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 209 (78.6 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 56/174 (32%), Positives = 78/174 (44%)
Query: 36 KCIYNTGGPQCDTCLPGY------FGDALALPKGD---CEP------CQCYIPGTLETET 80
+C +NT GP C C + G L LP G C C+CY G +
Sbjct: 306 ECEHNTTGPDCGKCKKNFRTRSWRAGSYLPLPHGSPNACATAGSFGNCECY--GHSNRCS 363
Query: 81 FTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDCDPVGSLNRTC 134
+ + +T C SCK + G +C C +G+Y S E C C+C+ +GS++ C
Sbjct: 364 YIDFLNVVT--CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDRC 421
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+ TG C CR G G +C+ C P HY GC P +CD + L C G C
Sbjct: 422 NE-TGFCECREGAAGPKCDDCLPTHYW--RQGCYPNVCD---DDQLLCQNGGTC 469
Score = 160 (61.4 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/132 (34%), Positives = 57/132 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYF--GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C C GY+ G A + C C C G++ C++ TG
Sbjct: 373 CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDR-----CNE-TGF 426
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGC--KSCDCDPVGSLNR-TCDPITGQ-CLCRPGV 147
C C+ G CD C HY +GC CD D + N TC + Q C C G
Sbjct: 427 CECREGAAGPKCDDCLPTHY---WRQGCYPNVCDDDQLLCQNGGTC--LQNQRCACPRGY 481
Query: 148 TGTRCEL--CQP 157
TG RCE C P
Sbjct: 482 TGVRCEQPRCDP 493
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 209 (78.6 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 56/184 (30%), Positives = 77/184 (41%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCY 71
C G S L G C C + T GP C C P Y + A A C C C
Sbjct: 257 CNGHASRCLLDPQGHL-TC-DCRHGTEGPDCSRCKPFYCDRPWQRATAREAHACLACSCN 314
Query: 72 IPGTLETETFTPVCDQLTGQ-----C-SCKPHVVGTNCDQCEVGHYN-----IISGEGCK 120
G F +L+G+ C +C+ + G +C C G Y + C+
Sbjct: 315 --GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACR 372
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
+CDC PVG+ +TC+ TGQC C+ GVTG C C P + S PC+ P+ +
Sbjct: 373 ACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGPTE 431
Query: 181 QCDP 184
+ P
Sbjct: 432 ESSP 435
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 209 (78.6 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 56/184 (30%), Positives = 77/184 (41%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGD----CEPCQCY 71
C G S L G C C + T GP C C P Y G C C C
Sbjct: 257 CNGHSSRCLMDTHGHLV-C-DCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACSCN 314
Query: 72 IPGTLETETFTPVCDQLTGQ-----C-SCKPHVVGTNCDQCEVGHYN----IISGE-GCK 120
G F +L+G+ C +C+ + G +C C G Y ++S C+
Sbjct: 315 --GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACR 372
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
+CDC PVG+ +TC+ TGQC C+ GVTG C C P + S PC+ P+ +
Sbjct: 373 ACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGPTE 431
Query: 181 QCDP 184
+ P
Sbjct: 432 ESSP 435
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 208 (78.3 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 56/184 (30%), Positives = 77/184 (41%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCY 71
C G S L G C C + T GP C C P Y + A A C C C
Sbjct: 257 CNGHASRCLLDTQGHL-IC-DCQHGTEGPDCGRCKPFYCDRPWQRATAREAHACLACSCN 314
Query: 72 IPGTLETETFTPVCDQLTGQ-----C-SCKPHVVGTNCDQCEVGHYN-----IISGEGCK 120
G F +L+G+ C +C+ + G +C C G Y + C+
Sbjct: 315 --GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACR 372
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
+CDC PVG+ +TC+ TGQC C+ GVTG C C P + S PC+ P+ +
Sbjct: 373 ACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGPTE 431
Query: 181 QCDP 184
+ P
Sbjct: 432 ESSP 435
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 208 (78.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 50/163 (30%), Positives = 71/163 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGD----CEPCQCYIPGTLETETFTPVCDQLTGQ- 91
C + T GP C C P Y G C C C G F +L+G+
Sbjct: 276 CQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLACSCN--GHARRCRFNMELYRLSGRR 333
Query: 92 ----C-SCKPHVVGTNCDQCEVGHYN----IISGE-GCKSCDCDPVGSLNRTCDPITGQC 141
C +C+ + G +C C G Y ++S C++CDC PVG+ +TC+ TGQC
Sbjct: 334 SGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVGAAGKTCNQTTGQC 393
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
C+ GVTG C C P + S PC+ P+ + + P
Sbjct: 394 PCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPVPGPTEESSP 435
Score = 149 (57.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 40/128 (31%), Positives = 50/128 (39%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDA--LALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
G CL C +NT G C C G++ D + + C C C+ G C+Q T
Sbjct: 336 GVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVGAAGK-----TCNQTT 390
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ-CL--CRPG 146
GQC CK V G C++C G S C PV P+ Q C CRP
Sbjct: 391 GQCPCKDGVTGLTCNRCAPGFQQ--SRSPVAPCVKTPVPGPTEESSPVEPQDCESHCRPA 448
Query: 147 VTGTRCEL 154
R L
Sbjct: 449 RGSYRISL 456
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 208 (78.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 56/175 (32%), Positives = 74/175 (42%)
Query: 16 CVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCY 71
C G S L G C C + T GP C C P Y + A A C C C
Sbjct: 257 CNGHASRCLLDTQGHL-IC-DCRHGTEGPDCGRCKPFYCDRPWQRATARESHACLACSCN 314
Query: 72 IPGTLETETFTPVCDQLTGQ-----C-SCKPHVVGTNCDQCEVGHYN-----IISGEGCK 120
G F +L+G+ C +C+ + G +C C G Y + C+
Sbjct: 315 --GHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACR 372
Query: 121 SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPI 175
+CDC PVG+ +TC+ TGQC C+ GVTG C C P + S PC+ PI
Sbjct: 373 ACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPG-FQQSRSPVAPCVKTPI 426
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 216 (81.1 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 50/154 (32%), Positives = 72/154 (46%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC----- 85
+G CL C + T G QC+ C PG+FGD DC+PC C P T + F+ C
Sbjct: 701 SGHCLSCQHKTEGAQCEKCKPGFFGDPSRGQYDDCKPCPC--PYTETSRRFSDTCFLDHD 758
Query: 86 DQLTGQC-SCKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSL-NR-TCDPITGQC 141
+Q T C +C+ G C++C G+ N + G P+ NR T +PI+ C
Sbjct: 759 NQAT--CDACREGYTGRRCEKCAPGYVGNPLQPNGKCIPAASPISKCDNRGTINPISKPC 816
Query: 142 LCRPGVTGTRCELCQPNHYGFSLD---GCKPCMC 172
C+ V G C+ C+ + + D GC C C
Sbjct: 817 YCKSNVAGALCDECKTGAFHLTADNPEGCLQCFC 850
Score = 200 (75.5 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 54/168 (32%), Positives = 71/168 (42%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
TGDCL C++NT G +C+ C+ GY+G+ C PC C G + + G
Sbjct: 1094 TGDCLNCLHNTIGRRCENCISGYYGNPKTGDPQACRPCPCL--GQTSNQPSSCYLGS-DG 1150
Query: 91 Q--CSCKPHVVGTNCDQCEVGHY-NIISGEGCK------SC-DCDPVGSLNRTCDPITGQ 140
Q C C G C++C G+ N G+ C C CD GS C TG
Sbjct: 1151 QPVCECPAGYTGRRCERCAPGYIGNPQLGQRCTPGSNNGDCYRCDQSGS--EGCSG-TGV 1207
Query: 141 CLCRPGVTGTRCELCQPNHYGFS---LDGCKPCMCDPIGSNSLQCDPS 185
C C+ V G C C+ + S DGC C C +G QC S
Sbjct: 1208 CRCKMNVEGPTCSSCKQGTFHLSPANKDGCLSCFC--MGVTQ-QCTSS 1252
Score = 196 (74.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 63/204 (30%), Positives = 88/204 (43%)
Query: 9 SVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC 68
S+ +I + + P A +C C GP C C GY L G CE C
Sbjct: 1024 SLSNIQMDIAVPHSTGNERAMEVEECA-CPQGYSGPSCQDCDVGYTRTP-GLYLGTCEKC 1081
Query: 69 QCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHY-NIISGE--GCKSCDC 124
+C+ G + CD TG C +C + +G C+ C G+Y N +G+ C+ C C
Sbjct: 1082 ECH--GHASS------CDSETGDCLNCLHNTIGRRCENCISGYYGNPKTGDPQACRPCPC 1133
Query: 125 -DPVGSLNRTCD-PITGQ--CLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNS- 179
+ +C GQ C C G TG RCE C P + G G + C P GSN+
Sbjct: 1134 LGQTSNQPSSCYLGSDGQPVCECPAGYTGRRCERCAPGYIGNPQLGQR---CTP-GSNNG 1189
Query: 180 --LQCDPSGQ--CPGVFMNRAEMS 199
+CD SG C G + R +M+
Sbjct: 1190 DCYRCDQSGSEGCSGTGVCRCKMN 1213
Score = 179 (68.1 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 52/164 (31%), Positives = 72/164 (43%)
Query: 9 SVMDILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC 68
S+ + + V P + A C +C G C C GY L G CEPC
Sbjct: 1423 SISGVHMDVAVPEYTSLAQALEVEQC-QCPPGYSGLSCQDCASGYTRTGGGLYLGHCEPC 1481
Query: 69 QCYIPGTLETETFTPVCDQLTGQCS-CKPHVVGTNCDQCEVGHY-NIISG--EGCKSCDC 124
+C G +T C TG C+ C+ + G C+QC G + + +G E C+ C C
Sbjct: 1482 ECN--GHSDT------CHPETGICTNCQHNTKGELCEQCVDGFFGDPTAGTPEDCQPCAC 1533
Query: 125 ---DPVGSLNRTCDPI-TG--QCL-CRPGVTGTRCELCQPNHYG 161
DP +RTC+ + G QC C+PG G CE C P + G
Sbjct: 1534 PGTDPENQFSRTCESLGNGGYQCTACQPGYLGQYCERCAPGYVG 1577
Score = 165 (63.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 50/166 (30%), Positives = 69/166 (41%)
Query: 33 DCLKCIYNTGGPQCDTCLPGYFGDALALPK-GDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
+C +C G C++C PG+ + + P G C C C CD ++G
Sbjct: 655 EC-RCPAGYSGLSCESCSPGF--ERVPGPYLGICAGCNC--------NGHASACDPVSGH 703
Query: 92 C-SCKPHVVGTNCDQCEVGHYNIIS-GE--GCKSCDCDPVGSLNR---TC---DPITGQC 141
C SC+ G C++C+ G + S G+ CK C C + R TC C
Sbjct: 704 CLSCQHKTEGAQCEKCKPGFFGDPSRGQYDDCKPCPCPYTETSRRFSDTCFLDHDNQATC 763
Query: 142 -LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
CR G TG RCE C P + G L C+ P S +CD G
Sbjct: 764 DACREGYTGRRCEKCAPGYVGNPLQPNGKCI--PAASPISKCDNRG 807
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 36/118 (30%), Positives = 51/118 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C G +C+ C PGY G+ L P G C P I T P+ + C
Sbjct: 763 CDACREGYTGRRCEKCAPGYVGNPLQ-PNGKCIPAASPISKCDNRGTINPI----SKPCY 817
Query: 94 CKPHVVGTNCDQCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
CK +V G CD+C+ G +++ + EGC C C +G + + R GV G
Sbjct: 818 CKSNVAGALCDECKTGAFHLTADNPEGCLQCFC--MGVTKQCASSTWSRDQVRGGVNG 873
Score = 136 (52.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 36/107 (33%), Positives = 46/107 (42%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGE--G-CKSCDCDPVGSLNRTCDPITGQCL-CRPG 146
QC C P G +C C G+ G G C+ C+C+ G + TC P TG C C+
Sbjct: 1447 QCQCPPGYSGLSCQDCASGYTRTGGGLYLGHCEPCECN--GHSD-TCHPETGICTNCQHN 1503
Query: 147 VTGTRCELCQPNHYGFSLDG----CKPCMC---DPIGSNSLQCDPSG 186
G CE C +G G C+PC C DP S C+ G
Sbjct: 1504 TKGELCEQCVDGFFGDPTAGTPEDCQPCACPGTDPENQFSRTCESLG 1550
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 5/9 (55%), Positives = 6/9 (66%)
Query: 63 GDCEPCQCY 71
G C PC C+
Sbjct: 440 GHCMPCFCF 448
>RGD|621188 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
CTD:1953 HOGENOM:HOG000097840 HOVERGEN:HBG079790 EMBL:AB011532
IPI:IPI00207575 PIR:T13954 RefSeq:NP_075244.1 UniGene:Rn.195598
ProteinModelPortal:O88281 PRIDE:O88281 GeneID:65049 KEGG:rno:65049
UCSC:RGD:621188 InParanoid:O88281 NextBio:613892
Genevestigator:O88281 Uniprot:O88281
Length = 1574
Score = 211 (79.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 66/175 (37%), Positives = 84/175 (48%)
Query: 28 AGTTGD-CL-KCIYNTGG---PQCDTCL--PGYFGDAL--ALPKGDCEP-CQCYIPGTLE 77
AG G CL +C G P CL PG++G A + P G P CQ E
Sbjct: 1384 AGRYGAACLLECFCQNNGSCEPTTGACLCGPGFYGQACEHSCPSGFHGPGCQ----RVCE 1439
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCD 135
+ P CD ++GQC C G C++ CE G + G+GC + C+C G CD
Sbjct: 1440 CQQGAP-CDPVSGQCLCPAGFHGQFCEKGCESGSF----GDGCLQQCNCH-TGV---PCD 1490
Query: 136 PITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
PI+G CLC PG TG C+L C+ +G GC CD G + CDP SGQC
Sbjct: 1491 PISGLCLCPPGRTGAACDLDCRRGRFG---PGCA-LRCD-CGGGA-DCDPISGQC 1539
Score = 197 (74.4 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/163 (37%), Positives = 73/163 (44%)
Query: 31 TGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG+C +C G C+ C PG FG DCE CQC PG ET+ CD
Sbjct: 1191 TGEC-RCPPGFTGLSCEQACQPGTFGK-------DCEHLCQC--PG----ETWA--CDPA 1234
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
+G C+C GT C Q C G Y G GC+ C C G TCDP TG C C G
Sbjct: 1235 SGVCTCAAGYHGTGCLQRCPSGRY----GPGCEHICKCLNGG----TCDPATGACYCPAG 1286
Query: 147 VTGTRCEL-CQPNHYGFS---LDGCKP-CMCDPIGSNSLQCDP 184
G C L C +G S + C+ CDP+ S + C P
Sbjct: 1287 FLGADCSLACPQGRFGPSCAHVCACRQGAACDPV-SGACICSP 1328
Score = 178 (67.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 61/177 (34%), Positives = 73/177 (41%)
Query: 33 DC-LKCIYNTGGPQCD---TCL--PGY--FGDALALPKGDCEPCQCYIP-GT--LETETF 81
DC +C T G C +C+ P + G+ L P E C P G L +
Sbjct: 730 DCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWGLGCQEI 789
Query: 82 TPVCDQ------LTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNRT 133
P C+ TG C C P VG+ C D C G Y G GC+ C C G
Sbjct: 790 CPACEHGASCNPETGTCLCLPGFVGSRCQDTCSAGWY----GTGCQIRCACANDGH---- 841
Query: 134 CDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CDP TG+C C PG TG C+ C H+G D PC C N CD SG C
Sbjct: 842 CDPTTGRCSCAPGWTGLSCQRACDSGHWG--PDCIHPCNCSAGHGN---CDAVSGLC 893
Score = 176 (67.0 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 45 QCDT-CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPV---CDQLTGQCSCKPHVV 99
+C T C PGY G+ DC + C G + + + V C ++TG+C C P
Sbjct: 717 ECRTQCPPGYQGE-------DCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKT 769
Query: 100 GTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQP 157
G +C C G + + E C +C+ G+ +C+P TG CLC PG G+RC+ C
Sbjct: 770 GEDCGADCPEGRWGLGCQEICPACEH---GA---SCNPETGTCLCLPGFVGSRCQDTCSA 823
Query: 158 NHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
YG GC+ C C +N CDP+ G+C
Sbjct: 824 GWYG---TGCQIRCAC----ANDGHCDPTTGRC 849
Score = 176 (67.0 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 52/163 (31%), Positives = 70/163 (42%)
Query: 34 CLKCIYNTG-GPQCDTCL--PGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
C C + P+ TCL PG+ G C I + CD T
Sbjct: 790 CPACEHGASCNPETGTCLCLPGFVGSRCQDTCSAGWYGTGCQIRCACANDGH---CDPTT 846
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+CSC P G +C + C+ GH+ G C C+C G N CD ++G CLC G
Sbjct: 847 GRCSCAPGWTGLSCQRACDSGHW----GPDCIHPCNCS-AGHGN--CDAVSGLCLCEAGY 899
Query: 148 TGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RCE C+ +YG S + + C C+ + CD SG C
Sbjct: 900 EGPRCEQSCRQGYYGPSCE--QKCRCE----HGAACDHVSGAC 936
Score = 173 (66.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/158 (36%), Positives = 67/158 (42%)
Query: 28 AGTTG-DC-LKCIYNTGGPQCDT------CLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
AG G DC C + G P CD C G +G A C P + +
Sbjct: 953 AGFFGLDCDSACNCSAGAP-CDAVTGSCICPAGRWGPRCAQ---SCPPLTFGLNCSQICT 1008
Query: 80 TFTPV-CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDP 136
F CD +TGQC C P +G C Q C G Y G+ C+ SC C G CDP
Sbjct: 1009 CFNGASCDSVTGQCHCAPGWMGPTCLQACPPGLY----GKNCQHSCLCRNGGR----CDP 1060
Query: 137 ITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMC 172
I GQC C G TG CE C P HY GC+ C C
Sbjct: 1061 ILGQCTCPEGWTGLACENECLPGHYAA---GCQLNCSC 1095
Score = 165 (63.1 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 42/108 (38%), Positives = 53/108 (49%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
C +TG C C P G +C+Q C G + GE C + C C P N +C +TG+C
Sbjct: 1144 CHHVTGACFCPPGWRGPHCEQACPRGWF----GEACAQRCLC-PT---NASCHHVTGECR 1195
Query: 143 CRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C PG TG CE CQP +G + C C P + CDP SG C
Sbjct: 1196 CPPGFTGLSCEQACQPGTFGKDCEHL--CQC-P--GETWACDPASGVC 1238
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/136 (34%), Positives = 58/136 (42%)
Query: 48 TCLPGYFGDALA--LPKG----DCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
TC GY G P G CE C+C GT CD TG C C +G
Sbjct: 1239 TCAAGYHGTGCLQRCPSGRYGPGCEHICKCLNGGT---------CDPATGACYCPAGFLG 1289
Query: 101 TNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQP 157
+C C G + G C C C G+ CDP++G C+C PG TG RCE C
Sbjct: 1290 ADCSLACPQGRF----GPSCAHVCACRQ-GA---ACDPVSGACICSPGKTGVRCEHGCPQ 1341
Query: 158 NHYGFSLDGCK-PCMC 172
+ +G GC+ C C
Sbjct: 1342 DRFG---KGCELKCAC 1354
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/170 (31%), Positives = 69/170 (40%)
Query: 37 CIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLETETFTP 83
C GG CD C PG G PKG C + C C G
Sbjct: 572 CTCQNGGT-CDPVLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGR-------- 622
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC 141
C +L G C C P + G C C + G GC + C C+ S R+C+P G C
Sbjct: 623 -CHRLYGACLCDPGLYGRFCHLACPPWAF----GPGCSEDCLCEQ--SHTRSCNPKDGSC 675
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C+ G G RC+ C+ +G GC+ C C P + CDP SG+C
Sbjct: 676 SCKAGFQGERCQAECESGFFG---PGCRHRCTCQP----GVACDPVSGEC 718
Score = 150 (57.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 48/146 (32%), Positives = 63/146 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DCE-PCQCYIPGTLETETFTPVCDQLT 89
C TG QC C PG+ G A P G +C+ C C G CD +
Sbjct: 1015 CDSVTG--QCH-CAPGWMGPTCLQACPPGLYGKNCQHSCLCRNGGR---------CDPIL 1062
Query: 90 GQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC+C G C+ +C GHY GC+ +C C G CD +TG CLC G
Sbjct: 1063 GQCTCPEGWTGLACENECLPGHY----AAGCQLNCSCLHGG----ICDRLTGHCLCPAGW 1114
Query: 148 TGTRCEL-CQPNHYGFSLDGCKPCMC 172
TG +C+ C +G + + C C
Sbjct: 1115 TGDKCQSSCVSGTFGVHCE--EHCAC 1138
Score = 146 (56.5 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 55/174 (31%), Positives = 74/174 (42%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C+ G +C DTC G++G + C C G CD T
Sbjct: 803 TGTCL-CLPGFVGSRCQDTCSAGWYGTGCQIR------CACANDGH---------CDPTT 846
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHY--NIISGEGCKSC--DCDPVGSLNRTCDP-ITG-QC- 141
G+CSC P G +C + C+ GH+ + I C + +CD V L C+ G +C
Sbjct: 847 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPRCE 905
Query: 142 -LCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
CR G G CE C+ H G + D C C P G C+ + CP F
Sbjct: 906 QSCRQGYYGPSCEQKCRCEH-GAACDHVSGACTC-PAGWRGSFCEHA--CPAGF 955
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/172 (29%), Positives = 71/172 (41%)
Query: 31 TGDCLKCIYNTGGPQCD------TCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFT 82
TG ++C G CD +C PG+ G + A G P C P
Sbjct: 828 TGCQIRCACANDG-HCDPTTGRCSCAPGWTGLSCQRACDSGHWGP-DCIHPCNCSAGHGN 885
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQ 140
CD ++G C C+ G C+Q C G+Y G C+ C C+ G+ CD ++G
Sbjct: 886 --CDAVSGLCLCEAGYEGPRCEQSCRQGYY----GPSCEQKCRCEH-GA---ACDHVSGA 935
Query: 141 CLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCM----CDPIGSNSLQCDPSGQ 187
C C G G+ CE C +G D C CD + + S C P+G+
Sbjct: 936 CTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAV-TGSCIC-PAGR 985
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 50/166 (30%), Positives = 70/166 (42%)
Query: 37 CIYNTGGPQCD------TCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTP-VCDQL 88
C+ GG +CD TC G+ G LA + +C P Y G L +CD+L
Sbjct: 1050 CLCRNGG-RCDPILGQCTCPEGWTG--LAC-ENECLPGH-YAAGCQLNCSCLHGGICDRL 1104
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TG C C G C C G + + E C +C G+ +C +TG C C PG
Sbjct: 1105 TGHCLCPAGWTGDKCQSSCVSGTFGVHCEEHC-ACR---KGA---SCHHVTGACFCPPGW 1157
Query: 148 TGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQCPGVF 192
G CE P G+ + C + C+C P ++ +CP F
Sbjct: 1158 RGPHCEQACPR--GWFGEACAQRCLC-PTNASCHHVTGECRCPPGF 1200
Score = 141 (54.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 53/176 (30%), Positives = 70/176 (39%)
Query: 36 KCIYN-TGGPQCDTCL-P-GYFG-D-ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
KC+ T P C P G+ G D +LA P+G P ++ + CD ++G
Sbjct: 1267 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCACRQGAA----CDPVSG 1322
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C C P G C+ C + G+GC+ C C G L C G C C G
Sbjct: 1323 ACICSPGKTGVRCEHGCPQDRF----GKGCELKCACRN-GGL---CHATNGSCSCPLGWM 1374
Query: 149 GTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAEMS 199
G CE C YG + C C GS C+P+ G C PG + E S
Sbjct: 1375 GPHCEHACPAGRYGAAC--LLECFCQNNGS----CEPTTGACLCGPGFYGQACEHS 1424
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/112 (36%), Positives = 49/112 (43%)
Query: 45 QCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET-ETFTPV-CDQLTGQCSCKPHVVGTN 102
QC C G+ G KG CE + G L+ T V CD ++G C C P G
Sbjct: 1452 QC-LCPAGFHGQFCE--KG-CESGS-FGDGCLQQCNCHTGVPCDPISGLCLCPPGRTGAA 1506
Query: 103 CD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
CD C G + G GC CDC G + CDPI+GQC C G C
Sbjct: 1507 CDLDCRRGRF----GPGCALRCDCG--GGAD--CDPISGQCHCVDSYMGPTC 1550
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 39/113 (34%), Positives = 44/113 (38%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC------KSCDCDPVGSLNRTCDPIT 138
CD +C P G CD C G II E C K+C TCDP+
Sbjct: 528 CDDCRNGGTCFPGQDG--CD-CPEGWTGIICNETCPPDTFGKNCSSPCTCQNGGTCDPVL 584
Query: 139 GQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGS-----NSLQCDP 184
G C C PGV+G CE C YG C K C C G + CDP
Sbjct: 585 GACRCPPGVSGAHCEDGCPKGFYG---KHCRKKCHCANRGRCHRLYGACLCDP 634
>UNIPROTKB|O88281 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621188 GO:GO:0005576 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR026823 Pfam:PF12662 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:AB011532 IPI:IPI00207575 PIR:T13954
RefSeq:NP_075244.1 UniGene:Rn.195598 ProteinModelPortal:O88281
PRIDE:O88281 GeneID:65049 KEGG:rno:65049 UCSC:RGD:621188
InParanoid:O88281 NextBio:613892 Genevestigator:O88281
Uniprot:O88281
Length = 1574
Score = 211 (79.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 66/175 (37%), Positives = 84/175 (48%)
Query: 28 AGTTGD-CL-KCIYNTGG---PQCDTCL--PGYFGDAL--ALPKGDCEP-CQCYIPGTLE 77
AG G CL +C G P CL PG++G A + P G P CQ E
Sbjct: 1384 AGRYGAACLLECFCQNNGSCEPTTGACLCGPGFYGQACEHSCPSGFHGPGCQ----RVCE 1439
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCD 135
+ P CD ++GQC C G C++ CE G + G+GC + C+C G CD
Sbjct: 1440 CQQGAP-CDPVSGQCLCPAGFHGQFCEKGCESGSF----GDGCLQQCNCH-TGV---PCD 1490
Query: 136 PITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
PI+G CLC PG TG C+L C+ +G GC CD G + CDP SGQC
Sbjct: 1491 PISGLCLCPPGRTGAACDLDCRRGRFG---PGCA-LRCD-CGGGA-DCDPISGQC 1539
Score = 197 (74.4 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/163 (37%), Positives = 73/163 (44%)
Query: 31 TGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG+C +C G C+ C PG FG DCE CQC PG ET+ CD
Sbjct: 1191 TGEC-RCPPGFTGLSCEQACQPGTFGK-------DCEHLCQC--PG----ETWA--CDPA 1234
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
+G C+C GT C Q C G Y G GC+ C C G TCDP TG C C G
Sbjct: 1235 SGVCTCAAGYHGTGCLQRCPSGRY----GPGCEHICKCLNGG----TCDPATGACYCPAG 1286
Query: 147 VTGTRCEL-CQPNHYGFS---LDGCKP-CMCDPIGSNSLQCDP 184
G C L C +G S + C+ CDP+ S + C P
Sbjct: 1287 FLGADCSLACPQGRFGPSCAHVCACRQGAACDPV-SGACICSP 1328
Score = 178 (67.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 61/177 (34%), Positives = 73/177 (41%)
Query: 33 DC-LKCIYNTGGPQCD---TCL--PGY--FGDALALPKGDCEPCQCYIP-GT--LETETF 81
DC +C T G C +C+ P + G+ L P E C P G L +
Sbjct: 730 DCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWGLGCQEI 789
Query: 82 TPVCDQ------LTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNRT 133
P C+ TG C C P VG+ C D C G Y G GC+ C C G
Sbjct: 790 CPACEHGASCNPETGTCLCLPGFVGSRCQDTCSAGWY----GTGCQIRCACANDGH---- 841
Query: 134 CDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CDP TG+C C PG TG C+ C H+G D PC C N CD SG C
Sbjct: 842 CDPTTGRCSCAPGWTGLSCQRACDSGHWG--PDCIHPCNCSAGHGN---CDAVSGLC 893
Score = 176 (67.0 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 45 QCDT-CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPV---CDQLTGQCSCKPHVV 99
+C T C PGY G+ DC + C G + + + V C ++TG+C C P
Sbjct: 717 ECRTQCPPGYQGE-------DCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKT 769
Query: 100 GTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQP 157
G +C C G + + E C +C+ G+ +C+P TG CLC PG G+RC+ C
Sbjct: 770 GEDCGADCPEGRWGLGCQEICPACEH---GA---SCNPETGTCLCLPGFVGSRCQDTCSA 823
Query: 158 NHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
YG GC+ C C +N CDP+ G+C
Sbjct: 824 GWYG---TGCQIRCAC----ANDGHCDPTTGRC 849
Score = 176 (67.0 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 52/163 (31%), Positives = 70/163 (42%)
Query: 34 CLKCIYNTG-GPQCDTCL--PGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
C C + P+ TCL PG+ G C I + CD T
Sbjct: 790 CPACEHGASCNPETGTCLCLPGFVGSRCQDTCSAGWYGTGCQIRCACANDGH---CDPTT 846
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+CSC P G +C + C+ GH+ G C C+C G N CD ++G CLC G
Sbjct: 847 GRCSCAPGWTGLSCQRACDSGHW----GPDCIHPCNCS-AGHGN--CDAVSGLCLCEAGY 899
Query: 148 TGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RCE C+ +YG S + + C C+ + CD SG C
Sbjct: 900 EGPRCEQSCRQGYYGPSCE--QKCRCE----HGAACDHVSGAC 936
Score = 173 (66.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/158 (36%), Positives = 67/158 (42%)
Query: 28 AGTTG-DC-LKCIYNTGGPQCDT------CLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
AG G DC C + G P CD C G +G A C P + +
Sbjct: 953 AGFFGLDCDSACNCSAGAP-CDAVTGSCICPAGRWGPRCAQ---SCPPLTFGLNCSQICT 1008
Query: 80 TFTPV-CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDP 136
F CD +TGQC C P +G C Q C G Y G+ C+ SC C G CDP
Sbjct: 1009 CFNGASCDSVTGQCHCAPGWMGPTCLQACPPGLY----GKNCQHSCLCRNGGR----CDP 1060
Query: 137 ITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMC 172
I GQC C G TG CE C P HY GC+ C C
Sbjct: 1061 ILGQCTCPEGWTGLACENECLPGHYAA---GCQLNCSC 1095
Score = 165 (63.1 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 42/108 (38%), Positives = 53/108 (49%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
C +TG C C P G +C+Q C G + GE C + C C P N +C +TG+C
Sbjct: 1144 CHHVTGACFCPPGWRGPHCEQACPRGWF----GEACAQRCLC-PT---NASCHHVTGECR 1195
Query: 143 CRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C PG TG CE CQP +G + C C P + CDP SG C
Sbjct: 1196 CPPGFTGLSCEQACQPGTFGKDCEHL--CQC-P--GETWACDPASGVC 1238
Score = 161 (61.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/136 (34%), Positives = 58/136 (42%)
Query: 48 TCLPGYFGDALA--LPKG----DCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
TC GY G P G CE C+C GT CD TG C C +G
Sbjct: 1239 TCAAGYHGTGCLQRCPSGRYGPGCEHICKCLNGGT---------CDPATGACYCPAGFLG 1289
Query: 101 TNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQP 157
+C C G + G C C C G+ CDP++G C+C PG TG RCE C
Sbjct: 1290 ADCSLACPQGRF----GPSCAHVCACRQ-GA---ACDPVSGACICSPGKTGVRCEHGCPQ 1341
Query: 158 NHYGFSLDGCK-PCMC 172
+ +G GC+ C C
Sbjct: 1342 DRFG---KGCELKCAC 1354
Score = 154 (59.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/170 (31%), Positives = 69/170 (40%)
Query: 37 CIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLETETFTP 83
C GG CD C PG G PKG C + C C G
Sbjct: 572 CTCQNGGT-CDPVLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGR-------- 622
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC 141
C +L G C C P + G C C + G GC + C C+ S R+C+P G C
Sbjct: 623 -CHRLYGACLCDPGLYGRFCHLACPPWAF----GPGCSEDCLCEQ--SHTRSCNPKDGSC 675
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C+ G G RC+ C+ +G GC+ C C P + CDP SG+C
Sbjct: 676 SCKAGFQGERCQAECESGFFG---PGCRHRCTCQP----GVACDPVSGEC 718
Score = 150 (57.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 48/146 (32%), Positives = 63/146 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DCE-PCQCYIPGTLETETFTPVCDQLT 89
C TG QC C PG+ G A P G +C+ C C G CD +
Sbjct: 1015 CDSVTG--QCH-CAPGWMGPTCLQACPPGLYGKNCQHSCLCRNGGR---------CDPIL 1062
Query: 90 GQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC+C G C+ +C GHY GC+ +C C G CD +TG CLC G
Sbjct: 1063 GQCTCPEGWTGLACENECLPGHY----AAGCQLNCSCLHGG----ICDRLTGHCLCPAGW 1114
Query: 148 TGTRCEL-CQPNHYGFSLDGCKPCMC 172
TG +C+ C +G + + C C
Sbjct: 1115 TGDKCQSSCVSGTFGVHCE--EHCAC 1138
Score = 146 (56.5 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 55/174 (31%), Positives = 74/174 (42%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C+ G +C DTC G++G + C C G CD T
Sbjct: 803 TGTCL-CLPGFVGSRCQDTCSAGWYGTGCQIR------CACANDGH---------CDPTT 846
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHY--NIISGEGCKSC--DCDPVGSLNRTCDP-ITG-QC- 141
G+CSC P G +C + C+ GH+ + I C + +CD V L C+ G +C
Sbjct: 847 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPRCE 905
Query: 142 -LCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
CR G G CE C+ H G + D C C P G C+ + CP F
Sbjct: 906 QSCRQGYYGPSCEQKCRCEH-GAACDHVSGACTC-PAGWRGSFCEHA--CPAGF 955
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/172 (29%), Positives = 71/172 (41%)
Query: 31 TGDCLKCIYNTGGPQCD------TCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFT 82
TG ++C G CD +C PG+ G + A G P C P
Sbjct: 828 TGCQIRCACANDG-HCDPTTGRCSCAPGWTGLSCQRACDSGHWGP-DCIHPCNCSAGHGN 885
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQ 140
CD ++G C C+ G C+Q C G+Y G C+ C C+ G+ CD ++G
Sbjct: 886 --CDAVSGLCLCEAGYEGPRCEQSCRQGYY----GPSCEQKCRCEH-GA---ACDHVSGA 935
Query: 141 CLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCM----CDPIGSNSLQCDPSGQ 187
C C G G+ CE C +G D C CD + + S C P+G+
Sbjct: 936 CTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAV-TGSCIC-PAGR 985
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 50/166 (30%), Positives = 70/166 (42%)
Query: 37 CIYNTGGPQCD------TCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTP-VCDQL 88
C+ GG +CD TC G+ G LA + +C P Y G L +CD+L
Sbjct: 1050 CLCRNGG-RCDPILGQCTCPEGWTG--LAC-ENECLPGH-YAAGCQLNCSCLHGGICDRL 1104
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TG C C G C C G + + E C +C G+ +C +TG C C PG
Sbjct: 1105 TGHCLCPAGWTGDKCQSSCVSGTFGVHCEEHC-ACR---KGA---SCHHVTGACFCPPGW 1157
Query: 148 TGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQCPGVF 192
G CE P G+ + C + C+C P ++ +CP F
Sbjct: 1158 RGPHCEQACPR--GWFGEACAQRCLC-PTNASCHHVTGECRCPPGF 1200
Score = 141 (54.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 53/176 (30%), Positives = 70/176 (39%)
Query: 36 KCIYN-TGGPQCDTCL-P-GYFG-D-ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
KC+ T P C P G+ G D +LA P+G P ++ + CD ++G
Sbjct: 1267 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCACRQGAA----CDPVSG 1322
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C C P G C+ C + G+GC+ C C G L C G C C G
Sbjct: 1323 ACICSPGKTGVRCEHGCPQDRF----GKGCELKCACRN-GGL---CHATNGSCSCPLGWM 1374
Query: 149 GTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAEMS 199
G CE C YG + C C GS C+P+ G C PG + E S
Sbjct: 1375 GPHCEHACPAGRYGAAC--LLECFCQNNGS----CEPTTGACLCGPGFYGQACEHS 1424
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/112 (36%), Positives = 49/112 (43%)
Query: 45 QCDTCLPGYFGDALALPKGDCEPCQCYIPGTLET-ETFTPV-CDQLTGQCSCKPHVVGTN 102
QC C G+ G KG CE + G L+ T V CD ++G C C P G
Sbjct: 1452 QC-LCPAGFHGQFCE--KG-CESGS-FGDGCLQQCNCHTGVPCDPISGLCLCPPGRTGAA 1506
Query: 103 CD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
CD C G + G GC CDC G + CDPI+GQC C G C
Sbjct: 1507 CDLDCRRGRF----GPGCALRCDCG--GGAD--CDPISGQCHCVDSYMGPTC 1550
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 39/113 (34%), Positives = 44/113 (38%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC------KSCDCDPVGSLNRTCDPIT 138
CD +C P G CD C G II E C K+C TCDP+
Sbjct: 528 CDDCRNGGTCFPGQDG--CD-CPEGWTGIICNETCPPDTFGKNCSSPCTCQNGGTCDPVL 584
Query: 139 GQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGS-----NSLQCDP 184
G C C PGV+G CE C YG C K C C G + CDP
Sbjct: 585 GACRCPPGVSGAHCEDGCPKGFYG---KHCRKKCHCANRGRCHRLYGACLCDP 634
>UNIPROTKB|E1C393 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0014719 "satellite cell activation" evidence=IEA] [GO:0014816
"satellite cell differentiation" evidence=IEA] [GO:0014841
"satellite cell proliferation" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0043654 "recognition of
apoptotic cell" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0051147 "regulation of
muscle cell differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0034109
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0051147 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AADN02073828 EMBL:AADN02073829
EMBL:AADN02073830 IPI:IPI00580976 ProteinModelPortal:E1C393
Ensembl:ENSGALT00000023694 Uniprot:E1C393
Length = 1132
Score = 209 (78.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 59/165 (35%), Positives = 74/165 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALAL----PKG----DC-EPCQCYIPGTLETETFTPVCDQ 87
C + TG +C C PG+ + P+G +C + CQC+ G +CD
Sbjct: 246 CHHVTG--EC-ACPPGWMTQGMVCGQPCPEGRYGNNCSQECQCHNGG---------ICDS 293
Query: 88 LTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
TGQC C P G C D+C VG Y + E +C C G C I+G CLC PG
Sbjct: 294 ATGQCHCSPGYTGERCQDECPVGTYGVRCAE---TCQCMNGGK----CYHISGACLCEPG 346
Query: 147 VTGTRCE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
TG CE LC YG D K C C N+ C P SG+C
Sbjct: 347 YTGEHCETRLCPEGVYGLKCD--KKCPCHL--HNTWSCHPMSGEC 387
Score = 173 (66.0 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 58/167 (34%), Positives = 73/167 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKGD----C-EPCQCYIPGTLETETFTPVCDQLT 89
C TG QC C PGY G+ P G C E CQC G C ++
Sbjct: 291 CDSATG--QCH-CSPGYTGERCQDECPVGTYGVRCAETCQCMNGGK---------CYHIS 338
Query: 90 GQCSCKPHVVGTNCDQ--CEVGHYNIISGEGC-KSCDCDPVGSLNRT--CDPITGQCLCR 144
G C C+P G +C+ C G Y G C K C C L+ T C P++G+C C+
Sbjct: 339 GACLCEPGYTGEHCETRLCPEGVY----GLKCDKKCPCH----LHNTWSCHPMSGECSCK 390
Query: 145 PGVTGTRC-ELCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
PG +G C E C P YG S C+ C C N CD +G+C
Sbjct: 391 PGWSGLYCNETCSPGFYGKS---CQQICSCQ----NGADCDSVTGKC 430
Score = 170 (64.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 55/171 (32%), Positives = 71/171 (41%)
Query: 31 TGDCLKCIYNTGGPQCDT-CLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG C+ C G C T CLPG +G +C C C + E +C +
Sbjct: 427 TGKCI-CASGFKGADCGTPCLPGTYGV-------NCSSVCNC------KNEA---ICSSV 469
Query: 89 TGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPG 146
G C+CK G +C C G + G GC +C C G+ C+ + G C C PG
Sbjct: 470 DGSCTCKAGWHGVDCSINCPSGTW----GLGCNLTCQCLNGGA----CNALDGTCTCAPG 521
Query: 147 VTGTRCEL-CQPNHYGFSL---------DGCKP----CMCDPIGSNSLQCD 183
G +CEL CQ YG DGC P C C P G + + CD
Sbjct: 522 WRGEKCELPCQDGTYGMDCAERCDCSHADGCHPTTGYCRCLP-GWSGIHCD 571
Score = 168 (64.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 51/162 (31%), Positives = 72/162 (44%)
Query: 36 KCIYNTGGPQCDTCLPGYFGD---ALALPKG----DCEP-CQCYIPGTLETETFTPVCDQ 87
KC + +G C C PGY G+ P+G C+ C C++ T C
Sbjct: 333 KCYHISGA--C-LCEPGYTGEHCETRLCPEGVYGLKCDKKCPCHLHNTWS-------CHP 382
Query: 88 LTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRP 145
++G+CSCKP G C++ C G Y G+ C+ C C G+ CD +TG+C+C
Sbjct: 383 MSGECSCKPGWSGLYCNETCSPGFY----GKSCQQICSCQN-GA---DCDSVTGKCICAS 434
Query: 146 GVTGTRCEL-CQPNHYGF---SLDGCK-PCMCDPIGSNSLQC 182
G G C C P YG S+ CK +C + S C
Sbjct: 435 GFKGADCGTPCLPGTYGVNCSSVCNCKNEAICSSV-DGSCTC 475
Score = 164 (62.8 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 67/198 (33%), Positives = 82/198 (41%)
Query: 29 GTTG-DC-LKCIYNTGGPQCD------TCLPGYFG---DALALP--KG-DCEP-CQCYIP 73
GT G DC KC G CD C PGY G + L P G CE C C
Sbjct: 185 GTYGNDCHQKCQCQNGAT-CDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEERCPCQNG 243
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVV--GTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGS 129
G +C +TG+C+C P + G C Q C G Y G C + C C G
Sbjct: 244 G---------ICHHVTGECACPPGWMTQGMVCGQPCPEGRY----GNNCSQECQCHNGG- 289
Query: 130 LNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFS-------LDGCK------PCMCDPI 175
CD TGQC C PG TG RC+ C YG ++G K C+C+P
Sbjct: 290 ---ICDSATGQCHCSPGYTGERCQDECPVGTYGVRCAETCQCMNGGKCYHISGACLCEP- 345
Query: 176 GSNSLQCDPSGQCP-GVF 192
G C+ + CP GV+
Sbjct: 346 GYTGEHCE-TRLCPEGVY 362
Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD ++GQC+C+ +G +C+Q C G Y G GC+ CDC N TCD ITG C
Sbjct: 769 CDHISGQCTCRTGFMGKHCEQKCPQGTY----GYGCRQICDC----LNNSTCDHITGTCY 820
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 821 CSPGWKGARCD 831
Score = 161 (61.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/171 (30%), Positives = 72/171 (42%)
Query: 36 KCIYNTG-GPQCDTCLPGYFG-DALALPKGD-----CEP-CQCYIPGTLETETFTPVCDQ 87
KC++ P C PG+ G + + D C CQC G L C+
Sbjct: 112 KCVHGRCIAPNTCQCEPGWGGPNCSSACDSDHWGPHCSSRCQCK-NGAL--------CNP 162
Query: 88 LTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRP 145
+TG C C G C++ C+ G Y G C + C C G+ TCD +TG+C C P
Sbjct: 163 ITGACHCASGFKGWRCEERCDQGTY----GNDCHQKCQCQN-GA---TCDHVTGECRCPP 214
Query: 146 GVTGTRCE-LCQPNHYGFSLDGCKPC----MCDPIGSNSLQCDPSGQCPGV 191
G TG CE LC P +G + PC +C + + C P G+
Sbjct: 215 GYTGAFCEDLCPPGKHGPQCEERCPCQNGGICHHV-TGECACPPGWMTQGM 264
Score = 155 (59.6 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 55/163 (33%), Positives = 65/163 (39%)
Query: 28 AGTTG-DC-LKCIYNTGGPQCD------TCLPGYFGDALALP--KG----DC-EPCQCYI 72
+GT G C L C GG C+ TC PG+ G+ LP G DC E C C
Sbjct: 490 SGTWGLGCNLTCQCLNGGA-CNALDGTCTCAPGWRGEKCELPCQDGTYGMDCAERCDC-- 546
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSL 130
+ C TG C C P G +CD C G + G C SC C S
Sbjct: 547 -------SHADGCHPTTGYCRCLPGWSGIHCDSVCAEGQW----GPNCSLSCYCKNGAS- 594
Query: 131 NRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDG-CKPCM 171
C P G C C PG GT C+ +C P YG C C+
Sbjct: 595 ---CSPDDGICECAPGYRGTTCQRICSPGFYGHRCSQTCPQCV 634
Score = 153 (58.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/166 (31%), Positives = 71/166 (42%)
Query: 34 CLKCIYNTGGPQ-----CDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCD 86
C +C++++G CD CLPG+ G AL C P + + T T C+
Sbjct: 630 CPQCVHSSGPCHHITGLCD-CLPGFTG---ALCNEVC-PSGRFGKNCIGICTCTNNGTCN 684
Query: 87 QLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCR 144
+ C C P +G++C Q C H+ G C +C+C G+ C G+C C
Sbjct: 685 PIDRSCQCYPGWIGSDCSQPCPPSHW----GPNCIHTCNCHN-GAY---CSAYDGECKCT 736
Query: 145 PGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
PG TG C + C YG D C C N CD SGQC
Sbjct: 737 PGWTGLYCTQRCPLGFYG--KDCALICQC----RNGADCDHISGQC 776
Score = 146 (56.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 46/151 (30%), Positives = 62/151 (41%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PGY G + P C P + + P C +TG C C P G
Sbjct: 602 CE-CAPGYRGTTCQRICSPGFYGHRCSQTCPQCVHSSG--P-CHHITGLCDCLPGFTGAL 657
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G + G+ C C C + N TC+PI C C PG G+ C + C P+H
Sbjct: 658 CNEVCPSGRF----GKNCIGICTC----TNNGTCNPIDRSCQCYPGWIGSDCSQPCPPSH 709
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 710 WG---PNCIHTCNCH----NGAYCSAYDGEC 733
Score = 142 (55.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/152 (30%), Positives = 59/152 (38%)
Query: 48 TCLPGYFG-D-ALALPKGD----CE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
TC G+ G D ++ P G C CQC G C+ L G C+C P G
Sbjct: 474 TCKAGWHGVDCSINCPSGTWGLGCNLTCQCLNGGA---------CNALDGTCTCAPGWRG 524
Query: 101 TNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPN 158
C+ C+ G Y + E CDC C P TG C C PG +G C+ +C
Sbjct: 525 EKCELPCQDGTYGMDCAE---RCDCSHADG----CHPTTGYCRCLPGWSGIHCDSVCAEG 577
Query: 159 HYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
+G C C C N C P G C
Sbjct: 578 QWG---PNCSLSCYC----KNGASCSPDDGIC 602
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 38/124 (30%), Positives = 51/124 (41%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD +TG+C C G +C C G Y G C S C+C C + G C
Sbjct: 423 CDSVTGKCICASGFKGADCGTPCLPGTY----GVNCSSVCNCKN----EAICSSVDGSCT 474
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGS-NSLQCDPSGQC-PGVFMNRAEM 198
C+ G G C + C +G GC C C G+ N+L D + C PG + E+
Sbjct: 475 CKAGWHGVDCSINCPSGTWGL---GCNLTCQCLNGGACNAL--DGTCTCAPGWRGEKCEL 529
Query: 199 SSDD 202
D
Sbjct: 530 PCQD 533
>WB|WBGene00006432 [details] [associations]
symbol:tag-53 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR000742 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0018991
GO:GO:0040011 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AF339882 EMBL:Z69790 PIR:T21694 RefSeq:NP_001024625.2
RefSeq:NP_510443.4 UniGene:Cel.8097 ProteinModelPortal:Q19981
SMR:Q19981 MINT:MINT-1127971 STRING:Q19981 PaxDb:Q19981
PRIDE:Q19981 EnsemblMetazoa:F33C8.1a GeneID:181566
KEGG:cel:CELE_F33C8.1 UCSC:F33C8.1b CTD:181566 WormBase:F33C8.1a
WormBase:F33C8.1b HOGENOM:HOG000018337 InParanoid:Q19981
OMA:MVVIFGH NextBio:914466 Uniprot:Q19981
Length = 1329
Score = 194 (73.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 42/112 (37%), Positives = 57/112 (50%)
Query: 64 DCEPCQCYIPGTLETE--TFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGEG-C 119
DC CQC T T +F PV + +C SC+ H G +C++C G Y G C
Sbjct: 941 DCPACQCNGHSTCFTSVGSFPPVTIE---KCQSCQNHTTGAHCERCAPGFYGDARNGGVC 997
Query: 120 KSCDCDPVGSLNRTCDPITGQCLCRP-GVTGTRCELCQPNHYGFSLDGCKPC 170
CDC + CDP++GQC C+ GVTG RC+ C+ + G +G PC
Sbjct: 998 SPCDCHHQADM---CDPVSGQCFCKTKGVTGDRCDKCEAKYVGNPRNGT-PC 1045
Score = 149 (57.5 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 33/92 (35%), Positives = 44/92 (47%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T C C +T G C+ C PG++GDA G C PC C+ + CD ++
Sbjct: 964 TIEKCQSCQNHTTGAHCERCAPGFYGDARN--GGVCSPCDCHHQADM--------CDPVS 1013
Query: 90 GQCSCKPH-VVGTNCDQCEVGHY-NIISGEGC 119
GQC CK V G CD+CE + N +G C
Sbjct: 1014 GQCFCKTKGVTGDRCDKCEAKYVGNPRNGTPC 1045
Score = 106 (42.4 bits), Expect = 0.00073, Sum P(2) = 0.00072
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 119 CKSCDCDPVGSLNRTCD---PIT-GQCL-CRPGVTGTRCELCQPNHYGFSLDG--CKPCM 171
C +C C+ + + P+T +C C+ TG CE C P YG + +G C PC
Sbjct: 942 CPACQCNGHSTCFTSVGSFPPVTIEKCQSCQNHTTGAHCERCAPGFYGDARNGGVCSPCD 1001
Query: 172 CDPIGSNSLQCDP-SGQC 188
C + CDP SGQC
Sbjct: 1002 CH---HQADMCDPVSGQC 1016
Score = 52 (23.4 bits), Expect = 0.00073, Sum P(2) = 0.00072
Identities = 30/112 (26%), Positives = 39/112 (34%)
Query: 16 CVGPPSDI-LKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYI-P 73
C P + LK+ T DC+ C +G C C G LP +C P
Sbjct: 652 CTNTPLRLALKTCEEQT-DCVSCASKSG---CGWCSSG----EQCLPNEQ----ECVDGP 699
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVG-H---YNIISGEGCKS 121
G L T C Q + +P + NC C + H Y I C S
Sbjct: 700 GML---TSWEKCPQRNSVATMRPCNMENNCGSCRISPHCTWYPIDKASPCVS 748
Score = 42 (19.8 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 32 GDCLK--CIYNTG--GPQCDTC 49
G CL C+ + G G QCD C
Sbjct: 73 GVCLNKACVCSKGWYGSQCDHC 94
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 199 (75.1 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 46/148 (31%), Positives = 67/148 (45%)
Query: 36 KCIYNTGGPQCDTCLPGY--FGDALALPKGD--CEPCQCYIPGT---LETETFTPVCDQL 88
+C ++T GP C++C P + + A P+ C PC C +E F +
Sbjct: 176 RCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRS 235
Query: 89 TGQCS-CKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
G C C+ H G +C C+ G + I S + C++C C P+G+ C+ GQC
Sbjct: 236 GGVCERCRHHTAGRHCHYCQPGFWRDPGQPISSRKACRACQCHPIGATGGACNQTNGQCS 295
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPC 170
C+ GVTG C C P Y S PC
Sbjct: 296 CKLGVTGLTCNRCGPG-YQQSRSPRMPC 322
Score = 142 (55.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 21 SDILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTL 76
S++ + G +G C +C ++T G C C PG++ G ++ K C CQC+ G
Sbjct: 225 SELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPISSRKA-CRACQCHPIGAT 283
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGH 110
C+Q GQCSCK V G C++C G+
Sbjct: 284 GG-----ACNQTNGQCSCKLGVTGLTCNRCGPGY 312
>RGD|735084 [details] [associations]
symbol:Megf10 "multiple EGF-like domains 10" species:10116
"Rattus norvegicus" [GO:0001891 "phagocytic cup" evidence=ISO]
[GO:0014719 "satellite cell activation" evidence=ISO] [GO:0014816
"satellite cell differentiation" evidence=ISO] [GO:0014841
"satellite cell proliferation" evidence=ISO] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042552 "myelination"
evidence=NAS] [GO:0043654 "recognition of apoptotic cell"
evidence=ISO] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:735084 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HOGENOM:HOG000294130 Pfam:PF12661
HSSP:P01132 OrthoDB:EOG42JNQJ IPI:IPI00371424 UniGene:Rn.224926
EMBL:L41686 ProteinModelPortal:Q63404 PhosphoSite:Q63404
UCSC:RGD:735084 HOVERGEN:HBG072163 InParanoid:Q63404
Genevestigator:Q63404 Uniprot:Q63404
Length = 220
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 56/163 (34%), Positives = 72/163 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG +C +C G+ G P+G +C + CQC+ G CD T
Sbjct: 48 CHHVTG--EC-SCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGA---------CDAAT 95
Query: 90 GQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
GQC C P G C D+C VG Y + E C+ C G C ++G CLC G +
Sbjct: 96 GQCHCSPGYTGERCQDECPVGTYGVRCAETCR---CVNGGK----CYHVSGTCLCEAGFS 148
Query: 149 GTRCE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G CE LC YG D PC D N+ C P SG+C
Sbjct: 149 GEFCEARLCPEGLYGIKCDKRCPCHLD----NTHSCHPMSGEC 187
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 58/163 (35%), Positives = 71/163 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFG---DALALP--KG-DCEP-CQCYIPGTLETETFTPVCDQLT 89
C + TG +C C PGY G + L P G CE C C G VC +T
Sbjct: 5 CDHITG--EC-RCSPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGG---------VCHHVT 52
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+CSC +GT C Q C G + G+ C + C C G+ CD TGQC C PG
Sbjct: 53 GECSCPSGWMGTVCGQPCPEGRF----GKNCSQECQCHNGGA----CDAATGQCHCSPGY 104
Query: 148 TGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQC-DPSGQC 188
TG RC+ C YG + C C N +C SG C
Sbjct: 105 TGERCQDECPVGTYGVRC--AETCRC----VNGGKCYHVSGTC 141
Score = 147 (56.8 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 48/144 (33%), Positives = 63/144 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV----CDQLTGQC 92
C TG QC C PGY G+ + +C P Y G ET V C ++G C
Sbjct: 91 CDAATG--QCH-CSPGYTGERC---QDEC-PVGTY--GVRCAETCRCVNGGKCYHVSGTC 141
Query: 93 SCKPHVVGTNCDQ--CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C+ G C+ C G Y I + C C D S C P++G+C C+PG +G
Sbjct: 142 LCEAGFSGEFCEARLCPEGLYGIKCDKRCP-CHLDNTHS----CHPMSGECGCKPGWSGL 196
Query: 151 RC-ELCQPNHYGFSLDGCKP-CMC 172
C E C P YG + C+ C C
Sbjct: 197 YCNETCSPGFYG---EACQQICSC 217
Score = 128 (50.1 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 54/175 (30%), Positives = 75/175 (42%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG+C +C G C D C PG G P+ CE C C G VC +
Sbjct: 9 TGEC-RCSPGYTGAFCEDLCPPGKHG-----PQ--CEQRCPCQNGG---------VCHHV 51
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCD---CDPV-GSLNRTCDP-ITGQ-C 141
TG+CSC +GT C Q C G + + C+ + CD G + C P TG+ C
Sbjct: 52 TGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGACDAATGQCH--CSPGYTGERC 109
Query: 142 L--CRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP-GVF 192
C G G RC E C+ + G C+C+ G + C+ + CP G++
Sbjct: 110 QDECPVGTYGVRCAETCRCVNGGKCYHVSGTCLCEA-GFSGEFCE-ARLCPEGLY 162
Score = 109 (43.4 bits), Expect = 0.00025, P = 0.00025
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 133 TCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPC----MCDPIGSNSLQCDPSG 186
TCD ITG+C C PG TG CE LC P +G + PC +C + + C PSG
Sbjct: 4 TCDHITGECRCSPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHV-TGECSC-PSG 60
Score = 109 (43.4 bits), Expect = 0.00025, P = 0.00025
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTG 90
KC + +G C+ G F +A P+G C+ C C++ T C ++G
Sbjct: 133 KCYHVSGTCLCEAGFSGEFCEARLCPEGLYGIKCDKRCPCHLDNTHS-------CHPMSG 185
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDC 124
+C CKP G C++ C G Y GE C+ C C
Sbjct: 186 ECGCKPGWSGLYCNETCSPGFY----GEACQQICSC 217
>UNIPROTKB|F1P0Z5 [details] [associations]
symbol:Gga.39688 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005520 "insulin-like growth factor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR000742
InterPro:IPR000867 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51323
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
GO:GO:0001558 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 OMA:QGAACDP EMBL:AADN02040897
EMBL:AADN02040898 EMBL:AADN02040899 EMBL:AADN02040900
EMBL:AADN02040901 IPI:IPI00584500 ProteinModelPortal:F1P0Z5
Ensembl:ENSGALT00000001544 Uniprot:F1P0Z5
Length = 1296
Score = 204 (76.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 63/159 (39%), Positives = 73/159 (45%)
Query: 37 CIYNTGGPQCDTCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C + TG QC C PG+ G A A P+G E C + T CD +TG+C
Sbjct: 804 CDHITG--QCH-CHPGWTGPRCAHACPQGRFGEGCS-QVCSCSNNAT----CDHITGRCL 855
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C +G C Q C G Y G GC + C C G TCDP TG C+C G TG
Sbjct: 856 CTAGWMGPTCQQACPEGFY----GTGCHQHCLCQNGG----TCDPTTGHCICPMGWTGLA 907
Query: 152 CEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQC 188
CEL C H G DGC + C C N CDP GQC
Sbjct: 908 CELACAEGH-G---DGCGQRCAC----LNGGVCDPQGQC 938
Score = 192 (72.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 65/176 (36%), Positives = 79/176 (44%)
Query: 32 GD-C-LKCIYNTGG---PQ--CDTCLPGYFGDALALP-------KGDCEPCQCYIPGTLE 77
GD C +C GG PQ C C PG+ G + P K E C C PG
Sbjct: 917 GDGCGQRCACLNGGVCDPQGQCQ-CPPGWSGSSCESPCLPGAFGKSCAERCACP-PGA-- 972
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCD 135
P CD +TGQCSC P G C+ C G + GE C + C C VG + C
Sbjct: 973 -----P-CDHITGQCSCPPGFTGAACETPCPPGTF----GERCAQRCRC--VGP-TQDCH 1019
Query: 136 PITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCD-PSGQC 188
PI+G C+C PG G CEL C YG GC +PC C N +C+ +G C
Sbjct: 1020 PISGVCVCAPGRHGPDCELECPVGWYG---PGCERPCEC----KNGARCERTTGTC 1068
Score = 179 (68.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 55/166 (33%), Positives = 72/166 (43%)
Query: 34 CLKCIYNTG-GPQCDTCL--PGYFGDAL--ALPKGDC-EPCQCYIPGTLETETFTPVCDQ 87
C +C N P C+ PG+ G P G + C C G C
Sbjct: 626 CPECANNGSCDPATGACVCPPGFTGSRCQDVCPPGWFGQSCSCGNEGH---------CHP 676
Query: 88 LTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRP 145
+TG CSC P G +C + C VG + G GC + C+C S +CD +TGQC C
Sbjct: 677 VTGTCSCAPGWTGHDCRRGCAVGRW----GPGCANVCECS---SSTGSCDAVTGQCACDA 729
Query: 146 GVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
G TG+RCE C +G GC+ C C+ + CD SG C
Sbjct: 730 GYTGSRCEERCPAGWFGL---GCRRRCQCE----HGAMCDHVSGAC 768
Score = 168 (64.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 49/153 (32%), Positives = 72/153 (47%)
Query: 36 KCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTGQCS 93
+C + TG +C C GY G+ +C P + G L + CD ++ +C
Sbjct: 546 RCDHITG--RCWKECPQGYHGENC---DQEC-PAGRFGAGCLLLCSCGGAPCDAVSRRCV 599
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
C P G +C Q C G + G GC+ C P + N +CDP TG C+C PG TG+RC
Sbjct: 600 CAPGWTGHDCAQACPEGRW----GLGCQEL-C-PECANNGSCDPATGACVCPPGFTGSRC 653
Query: 153 E-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
+ +C P +G S C P+ + + C P
Sbjct: 654 QDVCPPGWFGQSCSCGNEGHCHPV-TGTCSCAP 685
Score = 168 (64.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 62/175 (35%), Positives = 76/175 (43%)
Query: 31 TGDCLKCIYNTGGPQCDT------CLPGYFGDALALP----KGD-C-EPCQCYIPGTLET 78
TG C+ GG CD C G+ G A L GD C + C C G
Sbjct: 876 TGCHQHCLCQNGGT-CDPTTGHCICPMGWTGLACELACAEGHGDGCGQRCACLNGG---- 930
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDP 136
VCD GQC C P G++C+ C G + G+ C + C C P G+ CD
Sbjct: 931 -----VCDP-QGQCQCPPGWSGSSCESPCLPGAF----GKSCAERCACPP-GA---PCDH 976
Query: 137 ITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
ITGQC C PG TG CE C P +G + C + C C +G C P SG C
Sbjct: 977 ITGQCSCPPGFTGAACETPCPPGTFG---ERCAQRCRC--VGPTQ-DCHPISGVC 1025
Score = 167 (63.8 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 59/181 (32%), Positives = 81/181 (44%)
Query: 17 VGPPSDILKSVA-GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG- 74
V PP +S + G G C TG C +C PG+ G +G C + + PG
Sbjct: 656 VCPPGWFGQSCSCGNEGHCHPV---TG--TC-SCAPGWTGHDCR--RG-CAVGR-WGPGC 705
Query: 75 --TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSL 130
E + T CD +TGQC+C G+ C++ C G + G GC+ C C+ G++
Sbjct: 706 ANVCECSSSTGSCDAVTGQCACDAGYTGSRCEERCPAGWF----GLGCRRRCQCEH-GAM 760
Query: 131 NRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQ 187
CD ++G C C G GT CE C YG C+ C C N CD +GQ
Sbjct: 761 ---CDHVSGACTCAEGWRGTFCEHPCPDGFYGIE---CQHACNCQ----NGAHCDHITGQ 810
Query: 188 C 188
C
Sbjct: 811 C 811
Score = 166 (63.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 36/72 (50%), Positives = 40/72 (55%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ--CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
CD TG C C + G C + CE G Y GEGC+ CDC VG N CD ITG C
Sbjct: 1231 CDPATGHCHCPVGLRGHRCQEAGCEEGTY----GEGCRQRCDC--VG--NAPCDRITGHC 1282
Query: 142 LCRPGVTGTRCE 153
LC PG TG RC+
Sbjct: 1283 LCPPGKTGPRCD 1294
Score = 156 (60.0 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 56/178 (31%), Positives = 73/178 (41%)
Query: 29 GTTG-DCLK-CIYNTGG---PQCDTCL--PGYFGDAL--ALPKG----DC-EPCQCYIPG 74
GT G +C + C+ GG P TC PG G PKG C + C C G
Sbjct: 398 GTFGKNCSQLCLCQNGGTCEPATGTCRCPPGVAGIHCEDGCPKGFFGKQCRKKCNCANRG 457
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRT 133
C ++ G C C P + G C C + G GC +C V +
Sbjct: 458 R---------CHRIYGACLCDPGLYGRYCHLACPKWAF----GPGCSE-ECLCVQPNTQH 503
Query: 134 CDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
CD G C C+PG +G CE C+ YG +GCK C C P +CD +G+C
Sbjct: 504 CDKRDGSCSCKPGYSGVHCETKCEAGRYG---EGCKKKCSCPP----DARCDHITGRC 554
Score = 141 (54.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 56/179 (31%), Positives = 71/179 (39%)
Query: 30 TTGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV---- 84
T + C+ +T GP C TC G + CE C G L +T P
Sbjct: 344 TLSETFVCLEDTFGPDCSLTCEDCQNGGTCNVEGTGCE-CPAGWSGLLCNQTCPPGTFGK 402
Query: 85 -CDQLTGQC----SCKPHVVGT-NCD------QCEVGHYNIISGEGC-KSCDCDPVGSLN 131
C QL C +C+P GT C CE G G+ C K C+C G
Sbjct: 403 NCSQLC-LCQNGGTCEP-ATGTCRCPPGVAGIHCEDGCPKGFFGKQCRKKCNCANRGR-- 458
Query: 132 RTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
C I G CLC PG+ G C L P + F GC + C+C + N+ CD G C
Sbjct: 459 --CHRIYGACLCDPGLYGRYCHLACPK-WAFG-PGCSEECLC--VQPNTQHCDKRDGSC 511
Score = 129 (50.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 42/127 (33%), Positives = 58/127 (45%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPK-----GD-C-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG QC +C PG+ G A P G+ C + C+C P T C ++
Sbjct: 974 CDHITG--QC-SCPPGFTGAACETPCPPGTFGERCAQRCRCVGP--------TQDCHPIS 1022
Query: 90 GQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G C C P G +C+ +C VG Y G GC + C+C G+ C+ TG C C G
Sbjct: 1023 GVCVCAPGRHGPDCELECPVGWY----GPGCERPCECKN-GA---RCERTTGTCHCPAGY 1074
Query: 148 TGTRCEL 154
G C +
Sbjct: 1075 IGADCSI 1081
Score = 60 (26.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPSGQCPGVF 192
C PG GT C+ C H G + D C C P+G +C +G G +
Sbjct: 1210 CPPGFHGTDCQQHCDCAH-GAACDPATGHCHC-PVGLRGHRCQEAGCEEGTY 1259
>WB|WBGene00018304 [details] [associations]
symbol:agr-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0005605 "basal lamina" evidence=IDA] InterPro:IPR000742
InterPro:IPR002350 Pfam:PF00050 Pfam:PF07648 SMART:SM00181
SMART:SM00280 GO:GO:0009792 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 KO:K06254
InterPro:IPR002049 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00274 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR011497
GeneTree:ENSGT00530000063501 Pfam:PF02210 EMBL:AM773423
EMBL:FO081361 RefSeq:NP_001022152.3 UniGene:Cel.24197
ProteinModelPortal:G5EG68 SMR:G5EG68 EnsemblMetazoa:F41G3.12
GeneID:3565243 KEGG:cel:CELE_F41G3.12 CTD:3565243 WormBase:F41G3.12
OMA:SARICGE NextBio:955733 Uniprot:G5EG68
Length = 1473
Score = 204 (76.9 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 45/129 (34%), Positives = 63/129 (48%)
Query: 66 EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNI-ISGEG---CKS 121
+ CQC G+ F CD+ TGQC C+P V G CD C + I + +G C+
Sbjct: 669 DSCQCNRVGS-----FGHTCDE-TGQCKCRPGVAGIKCDHCLPSFWGIHLIAQGALSCRP 722
Query: 122 CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC-KPCMCD-PIGSNS 179
C C GS C+ TG+C C+ G G +C+LC PN + GC P + P +S
Sbjct: 723 CGCSAFGSSRSDCEQTTGKCECKNGALGDKCDLC-PNGSMMTAGGCVSPAVYKTPRDCHS 781
Query: 180 LQCDPSGQC 188
L+C +C
Sbjct: 782 LRCFHGAKC 790
Score = 157 (60.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 44/139 (31%), Positives = 63/139 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKG--DCEPCQCYIPGTLETETFTPVCDQL 88
TG C KC G +CD CLP ++G L + +G C PC C G+ ++ C+Q
Sbjct: 686 TGQC-KCRPGVAGIKCDHCLPSFWGIHL-IAQGALSCRPCGCSAFGSSRSD-----CEQT 738
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT----GQCLCR 144
TG+C CK +G CD C G ++++ GC S V R C + +C+
Sbjct: 739 TGKCECKNGALGDKCDLCPNG--SMMTAGGCVS---PAVYKTPRDCHSLRCFHGAKCVPS 793
Query: 145 PG-VTGTRC-ELCQPNHYG 161
P C + C NH G
Sbjct: 794 PSSFPDCICPQSCNMNHLG 812
>UNIPROTKB|A0JM12 [details] [associations]
symbol:megf10 "Multiple epidermal growth factor-like
domains protein 10" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014816
"satellite cell differentiation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
GO:GO:0016021 GO:GO:0005886 GO:GO:0007155 GO:GO:0006909
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 CTD:84466
HOVERGEN:HBG108333 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:BC125696 RefSeq:NP_001072726.1 UniGene:Str.46279
ProteinModelPortal:A0JM12 Ensembl:ENSXETT00000034579 GeneID:780183
KEGG:xtr:780183 Xenbase:XB-GENE-491974 Bgee:A0JM12 Uniprot:A0JM12
Length = 1114
Score = 202 (76.2 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 59/163 (36%), Positives = 76/163 (46%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG +C +C G+ G P+G +C + CQC+ GT CD T
Sbjct: 245 CHHVTG--EC-SCPAGWMGTVCGQPCPEGRYGRNCSQECQCHNGGT---------CDSAT 292
Query: 90 GQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
GQC C P G C ++C VG Y + + ++C C G C I+G CLC PG T
Sbjct: 293 GQCYCSPGYNGERCQEECPVGLYGV---KCAQTCQCLNGGK----CYHISGACLCEPGYT 345
Query: 149 GTRCE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RCE LC YG D K C C + S C P SG+C
Sbjct: 346 GERCETPLCSEGTYGMKCD--KKCPCHLQYTQS--CHPMSGEC 384
Score = 201 (75.8 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 58/170 (34%), Positives = 80/170 (47%)
Query: 31 TGDCL---KCIYNTGGPQCDTCLPGYFGDALALP---KGD----CEP-CQCYIPGTLETE 79
T CL KC + +G C C PGY G+ P +G C+ C C++
Sbjct: 322 TCQCLNGGKCYHISGA--C-LCEPGYTGERCETPLCSEGTYGMKCDKKCPCHLQ------ 372
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPI 137
+T C ++G+C+CKP G C++ C +G Y GE C+ C C G+ CD +
Sbjct: 373 -YTQSCHPMSGECACKPGRSGLYCNETCSLGFY----GEFCQQICSCQN-GA---DCDSV 423
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGF---SLDGCKP-CMCDPIGSNSLQC 182
TG+C+C PG TG C C P YG SL CK +C P+ S C
Sbjct: 424 TGKCICAPGFTGVDCSTACPPGTYGVNCSSLCNCKNNAVCSPV-DGSCTC 472
Score = 184 (69.8 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 67/190 (35%), Positives = 75/190 (39%)
Query: 29 GTTG-DCLKCIYNTGGPQCD------TCLPGYFG---DALALPK---GDCEP-CQCYIPG 74
GT G DC + G CD C PGY G + L P CE C C G
Sbjct: 184 GTYGNDCQQKCQCQNGASCDHVTGECRCPPGYTGAFCEDLCPPGKHGSQCEERCPCQNGG 243
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNR 132
VC +TG+CSC +GT C Q C G Y G C + C C G
Sbjct: 244 ---------VCHHVTGECSCPAGWMGTVCGQPCPEGRY----GRNCSQECQCHNGG---- 286
Query: 133 TCDPITGQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQC-DPSGQC-- 188
TCD TGQC C PG G RC E C YG + C C N +C SG C
Sbjct: 287 TCDSATGQCYCSPGYNGERCQEECPVGLYGVKC--AQTCQC----LNGGKCYHISGACLC 340
Query: 189 -PGVFMNRAE 197
PG R E
Sbjct: 341 EPGYTGERCE 350
Score = 164 (62.8 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 54/172 (31%), Positives = 72/172 (41%)
Query: 34 CLKCIYNTGG-----PQCDTCLPGYFGDAL--ALPKG----DCEP-CQCYIPGTLETETF 81
C +C+++ G QCD CL G+ G P G +C C C GT
Sbjct: 627 CPQCVHSNGPCHHVTGQCD-CLAGFMGSLCNEVCPSGRYGKNCAGVCACTNNGT------ 679
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITG 139
C+ + G C C P +G +C Q C GH+ G C +C+C G+ C G
Sbjct: 680 ---CNPIDGTCQCYPGWIGNDCSQACPPGHW----GPNCIHTCNCHN-GAY---CSAYDG 728
Query: 140 QCLCRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
+C C PG TG C + C +YG C C C N CD +GQC
Sbjct: 729 ECKCSPGWTGLYCTQRCPLGYYGKE---CTLVCQCQ----NGADCDHITGQC 773
Score = 161 (61.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 59/187 (31%), Positives = 76/187 (40%)
Query: 29 GTTGD-CLKCIYNTGGPQCDT------CLPGYFG-D-ALALPKGDCEPCQCYIPGTLETE 79
G G+ C + G CD+ C PG+ G D + A P G C +L
Sbjct: 402 GFYGEFCQQICSCQNGADCDSVTGKCICAPGFTGVDCSTACPPGTYG-VNC---SSLCNC 457
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPI 137
VC + G C+CK G +C C G + G GC +C C G+ C+P+
Sbjct: 458 KNNAVCSPVDGSCTCKAGWHGVDCSINCPRGSW----GLGCNLTCQCLNGGA----CNPL 509
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGFSL---------DGCKP----CMCDPIGSNSLQCD 183
G C C PG G +CEL CQ YG + DGC P C C G + CD
Sbjct: 510 DGTCTCAPGWRGLKCELPCQDGTYGMNCIERCDCSHADGCHPATGYCRC-LAGWAGMHCD 568
Query: 184 PSGQCPG 190
CPG
Sbjct: 569 --SVCPG 573
Score = 159 (61.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 51/152 (33%), Positives = 59/152 (38%)
Query: 48 TCLPGYFGDALALPKGD------C-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
TC PG+ G LP D C E C C + C TG C C G
Sbjct: 514 TCAPGWRGLKCELPCQDGTYGMNCIERCDC---------SHADGCHPATGYCRCLAGWAG 564
Query: 101 TNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQP 157
+CD C GH+ G C SCDC S C P G C C PG GT C+ +C P
Sbjct: 565 MHCDSVCPGGHW----GPNCSLSCDCKNGAS----CSPDDGICECAPGYRGTTCQRICSP 616
Query: 158 NHYGFSLD-GCKPCMCDPIGSNSLQCDPSGQC 188
YG C C + SN +GQC
Sbjct: 617 GFYGHRCSQACPQC----VHSNGPCHHVTGQC 644
Score = 158 (60.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 48/151 (31%), Positives = 63/151 (41%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PGY G + P C P + + P C +TGQC C +G+
Sbjct: 599 CE-CAPGYRGTTCQRICSPGFYGHRCSQACPQCVHSNG--P-CHHVTGQCDCLAGFMGSL 654
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G Y G+ C C C + N TC+PI G C C PG G C + C P H
Sbjct: 655 CNEVCPSGRY----GKNCAGVCAC----TNNGTCNPIDGTCQCYPGWIGNDCSQACPPGH 706
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 707 WG---PNCIHTCNCH----NGAYCSAYDGEC 730
Score = 157 (60.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 32/71 (45%), Positives = 39/71 (54%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD +TGQC+C+ +G C+Q C Y G GC+ CDC N TCD ITG C
Sbjct: 766 CDHITGQCTCRTGFMGKFCEQKCPSASY----GYGCRQVCDC----LNNSTCDHITGTCY 817
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 818 CSPGWKGARCD 828
Score = 147 (56.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/134 (36%), Positives = 61/134 (45%)
Query: 69 QCYIPGTLET-ETFTPVC-DQLT-GQC------SCKPHVVGTNCDQ-CEVGHYNIISGEG 118
QC PG E+ E P C D+ G+C C+P G NC C+V H+ G
Sbjct: 92 QC-CPGFYESREMCVPHCADKCVHGRCIAPNTCQCEPGWGGPNCSSACDVDHW----GPH 146
Query: 119 CKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPI 175
C S C C G+L C+PITG C C G G RCE C YG + C+ C C
Sbjct: 147 CSSRCQCKN-GAL---CNPITGACHCSSGYKGWRCEERCDQGTYG---NDCQQKCQCQ-- 197
Query: 176 GSNSLQCDP-SGQC 188
N CD +G+C
Sbjct: 198 --NGASCDHVTGEC 209
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 47/162 (29%), Positives = 69/162 (42%)
Query: 36 KCIYNTGGPQCDTCLPGY----FGDALALPKGDCEPCQCYIPGT---LETETFTPVCDQL 88
+C ++T G C++C P + + A C PC C +E F +
Sbjct: 176 RCRHHTTGLGCESCRPSHRDWPWRPATPWHPHPCLPCSCNQHARRCRFNSELFRLSGGRS 235
Query: 89 TGQCS-CKPHVVGTNCDQCEVGHYN-----IISGEGCKSCDCDPVGSLNRTCDPITGQCL 142
G C C+ H G +C C+ G + I S + C++C C P+G+ C+ +GQC
Sbjct: 236 GGVCERCRHHTAGRHCHYCQPGFWRDPGQPITSRKACRACQCHPIGATGGICNQTSGQCS 295
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
C+ GVTG C C P Y S PC P + L P
Sbjct: 296 CKLGVTGLTCNRCGPG-YQQSRSPWMPCQRIPEATTPLVTTP 336
Score = 145 (56.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/94 (32%), Positives = 48/94 (51%)
Query: 21 SDILKSVAGTTGD-CLKCIYNTGGPQCDTCLPGYF---GDALALPKGDCEPCQCYIPGTL 76
S++ + G +G C +C ++T G C C PG++ G + K C CQC+ G
Sbjct: 225 SELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDPGQPITSRKA-CRACQCHPIGAT 283
Query: 77 ETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGH 110
+C+Q +GQCSCK V G C++C G+
Sbjct: 284 GG-----ICNQTSGQCSCKLGVTGLTCNRCGPGY 312
>UNIPROTKB|F1NQC4 [details] [associations]
symbol:F1NQC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
GeneTree:ENSGT00700000104042 EMBL:AADN02026516 IPI:IPI00578210
Ensembl:ENSGALT00000005827 OMA:ALADCEC Uniprot:F1NQC4
Length = 175
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 44/127 (34%), Positives = 62/127 (48%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE-----GCKS 121
C+CY G ++ + +T C SCK + G +C C +G Y S E C
Sbjct: 2 CECY--GHSNRCSYIDFLNVVT--CVSCKHNTRGQHCQHCRLGFYRNSSAELDDENVCIE 57
Query: 122 CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQ 181
C+C+ +GSL+ C+ TG C C+ G TG +C+ C PN+Y GC P +CD L
Sbjct: 58 CNCNQIGSLHDRCNE-TGYCECKEGATGPKCDDCLPNYYW--RQGCFPNVCD---DELLL 111
Query: 182 CDPSGQC 188
C G C
Sbjct: 112 CQNGGTC 118
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 37/125 (29%), Positives = 54/125 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C C G++ ++ A + C C C G+L C++ TG
Sbjct: 22 CVSCKHNTRGQHCQHCRLGFYRNSSAELDDENVCIECNCNQIGSLHDR-----CNE-TGY 75
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGC--KSCDCDPVGSLNR-TCDPITGQCLCRPGVT 148
C CK G CD C +Y +GC CD + + N TC +C+C G
Sbjct: 76 CECKEGATGPKCDDCLPNYY---WRQGCFPNVCDDELLLCQNGGTCYQ-NQRCICPVGFK 131
Query: 149 GTRCE 153
G C+
Sbjct: 132 GVLCQ 136
>MGI|MGI:2685177 [details] [associations]
symbol:Megf10 "multiple EGF-like-domains 10" species:10090
"Mus musculus" [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0014719 "satellite cell activation"
evidence=IMP] [GO:0014816 "satellite cell differentiation"
evidence=ISO;IMP] [GO:0014841 "satellite cell proliferation"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IMP;IDA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0051147 "regulation of muscle cell
differentiation" evidence=ISO] [GO:0055001 "muscle cell
development" evidence=ISO] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 MGI:MGI:2685177
GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654 HSSP:P01132
GO:GO:0051147 CTD:84466 HOVERGEN:HBG108333 OMA:FGCNLTC
GO:GO:0014719 GO:GO:0014841 EMBL:AK147238 EMBL:AK148084
EMBL:AK166316 EMBL:BC075647 IPI:IPI00453778 RefSeq:NP_001001979.1
UniGene:Mm.297863 ProteinModelPortal:Q6DIB5 SMR:Q6DIB5
STRING:Q6DIB5 PhosphoSite:Q6DIB5 PRIDE:Q6DIB5
Ensembl:ENSMUST00000075770 Ensembl:ENSMUST00000139892 GeneID:70417
KEGG:mmu:70417 UCSC:uc008eyz.2 InParanoid:Q6DIB5 OrthoDB:EOG42JNQJ
ChiTaRS:MEGF10 NextBio:331567 Bgee:Q6DIB5 CleanEx:MM_MEGF10
Genevestigator:Q6DIB5 Uniprot:Q6DIB5
Length = 1147
Score = 200 (75.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/163 (34%), Positives = 73/163 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG +C +C G+ G P+G +C + CQC+ GT CD T
Sbjct: 246 CHHVTG--EC-SCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGT---------CDAAT 293
Query: 90 GQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
GQC C P G C D+C VG Y + E C+ C G C ++G CLC G +
Sbjct: 294 GQCHCSPGYTGERCQDECPVGSYGVRCAEACR---CVNGGK----CYHVSGTCLCEAGFS 346
Query: 149 GTRCE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G CE LC YG D PC D N+ C P SG+C
Sbjct: 347 GELCEARLCPEGLYGIKCDKRCPCHLD----NTHSCHPMSGEC 385
Score = 185 (70.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 50/155 (32%), Positives = 70/155 (45%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTG 90
KC + +G C+ G +A P+G C+ C C++ T C ++G
Sbjct: 331 KCYHVSGTCLCEAGFSGELCEARLCPEGLYGIKCDKRCPCHLDNTHS-------CHPMSG 383
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVT 148
+C CKP G C++ C G Y GE C+ C C G+ CD +TG+C C PG
Sbjct: 384 ECGCKPGWSGLYCNETCSPGFY----GEACQQICSCQN-GA---DCDSVTGRCACAPGFK 435
Query: 149 GTRCEL-CQPNHYGFSLD---GCK-PCMCDPI-GS 177
GT C C YG + GCK +C P+ GS
Sbjct: 436 GTDCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGS 470
Score = 176 (67.0 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 63/178 (35%), Positives = 74/178 (41%)
Query: 29 GTTG-DCLKCIYNTGGPQCD------TCLPGYFG---DALALP--KGD-CEP-CQCYIPG 74
GT G DC + G CD C PGY G + L P G CE C C G
Sbjct: 185 GTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPHCEQRCPCQNGG 244
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNR 132
VC +TG+CSC +GT C Q C G + G+ C + C C G
Sbjct: 245 ---------VCHHVTGECSCPSGWMGTVCGQPCPEGRF----GKNCSQECQCHNGG---- 287
Query: 133 TCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQC-DPSGQC 188
TCD TGQC C PG TG RC+ C YG + C C N +C SG C
Sbjct: 288 TCDAATGQCHCSPGYTGERCQDECPVGSYGVRC--AEACRC----VNGGKCYHVSGTC 339
Score = 169 (64.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 52/160 (32%), Positives = 70/160 (43%)
Query: 36 KCIYNTG-GPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
KC++ P C PG+ G + + GD C + +C+ +TG C
Sbjct: 112 KCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRA---LCNPITGACH 168
Query: 94 CKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G C D+CE G Y G C + C C G+ TCD ITG+C C PG TG
Sbjct: 169 CAAGYRGWRCEDRCEQGTY----GNDCHQRCQCQN-GA---TCDHITGECRCSPGYTGAF 220
Query: 152 CE-LCQPNHYGFSLDGCKPC----MCDPIGSNSLQCDPSG 186
CE LC P +G + PC +C + + C PSG
Sbjct: 221 CEDLCPPGKHGPHCEQRCPCQNGGVCHHV-TGECSC-PSG 258
Score = 164 (62.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD ++GQC+C+ +G +C+Q C G Y G GC+ CDC N TCD ITG C
Sbjct: 767 CDHISGQCTCRTGFMGRHCEQKCPAGTY----GYGCRQICDC----LNNSTCDHITGTCY 818
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 819 CSPGWKGARCD 829
Score = 157 (60.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 40/111 (36%), Positives = 53/111 (47%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD +TG+C+C P GT+C C +G Y I C C D V C P+ G C+C
Sbjct: 421 CDSVTGRCACAPGFKGTDCSTPCPLGRYGINCSSRC-GCKNDAV------CSPVDGSCIC 473
Query: 144 RPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGS-NSLQCDPSGQC-PG 190
+ G G C + C +GF GC C C G+ N+L D + C PG
Sbjct: 474 KAGWHGVDCSIRCPSGTWGF---GCNLTCQCLNGGACNTL--DGTCTCAPG 519
Score = 157 (60.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 55/172 (31%), Positives = 73/172 (42%)
Query: 34 CLKCIYNTGGPQ-----CDTCLPGYFGDALA---LPKG----DCEP-CQCYIPGTLETET 80
C +C++++G CD CLPG+ G AL P G +C C C GT
Sbjct: 628 CPQCVHSSGPCHHITGLCD-CLPGFTG-ALCNEVCPSGRFGKNCAGVCTCTNNGT----- 680
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPIT 138
C+ + C C P +G++C Q C H+ G C +C+C G+ C
Sbjct: 681 ----CNPIDRSCQCYPGWIGSDCSQPCPPAHW----GPNCIHTCNCHN-GAF---CSAYD 728
Query: 139 GQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C PG TG C + C YG D C C N CD SGQC
Sbjct: 729 GECKCTPGWTGLYCTQRCPLGFYG--KDCALICQCQ----NGADCDHISGQC 774
Score = 150 (57.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 47/151 (31%), Positives = 59/151 (39%)
Query: 49 CLPGYFG-D-ALALPKGD----CE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
C G+ G D ++ P G C CQC G C+ L G C+C P G
Sbjct: 473 CKAGWHGVDCSIRCPSGTWGFGCNLTCQCLNGGA---------CNTLDGTCTCAPGWRGA 523
Query: 102 NCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNH 159
C+ C+ G Y + E CDC C P TG C C PG +G C+ +C
Sbjct: 524 KCEFPCQDGTYGLNCAE---RCDCSHADG----CHPTTGHCRCLPGWSGVHCDSVCAEGR 576
Query: 160 YGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
+G C PC C N C P G C
Sbjct: 577 WG---PNCSLPCYC----KNGASCSPDDGIC 600
Score = 144 (55.7 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 52/159 (32%), Positives = 62/159 (38%)
Query: 24 LKSVAGTTG-DC-LKCIYNTGGPQCDTCLPGYFGDALALPKGDCE-PCQCYIPGTLETE- 79
++ +GT G C L C GG C+T L G A CE PCQ G E
Sbjct: 484 IRCPSGTWGFGCNLTCQCLNGGA-CNT-LDGTCTCAPGWRGAKCEFPCQDGTYGLNCAER 541
Query: 80 ---TFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTC 134
+ C TG C C P G +CD C G + G C C C S C
Sbjct: 542 CDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRW----GPNCSLPCYCKNGAS----C 593
Query: 135 DPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDG-CKPCM 171
P G C C PG GT C+ +C P YG C C+
Sbjct: 594 SPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCV 632
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 39/103 (37%), Positives = 48/103 (46%)
Query: 92 CSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRT-CDPITGQCLCRPGVT 148
C C+P GTNC C+ H+ G C S C C NR C+PITG C C G
Sbjct: 124 CQCEPGWGGTNCSSACDGDHW----GPHCSSRCQCK-----NRALCNPITGACHCAAGYR 174
Query: 149 GTRCE-LCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
G RCE C+ YG + C + C C N CD +G+C
Sbjct: 175 GWRCEDRCEQGTYG---NDCHQRCQCQ----NGATCDHITGEC 210
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 46/144 (31%), Positives = 59/144 (40%)
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQC 141
VC + G C CK G +C +C G + G GC +C C G+ C+ + G C
Sbjct: 463 VCSPVDGSCICKAGWHGVDCSIRCPSGTW----GFGCNLTCQCLNGGA----CNTLDGTC 514
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSL---------DGCKP----CMCDPIGSNSLQCD---- 183
C PG G +CE CQ YG + DGC P C C P G + + CD
Sbjct: 515 TCAPGWRGAKCEFPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLP-GWSGVHCDSVCA 573
Query: 184 -----PSGQCPGVFMNRAEMSSDD 202
P+ P N A S DD
Sbjct: 574 EGRWGPNCSLPCYCKNGASCSPDD 597
Score = 139 (54.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 45/151 (29%), Positives = 61/151 (40%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PG+ G + P C P + + P C +TG C C P G
Sbjct: 600 CE-CAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSG--P-CHHITGLCDCLPGFTGAL 655
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G + G+ C C C + N TC+PI C C PG G+ C + C P H
Sbjct: 656 CNEVCPSGRF----GKNCAGVCTC----TNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAH 707
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 708 WG---PNCIHTCNCH----NGAFCSAYDGEC 731
>ZFIN|ZDB-GENE-090312-12 [details] [associations]
symbol:megf6a "multiple EGF-like-domains 6a"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-090312-12 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR026823 Pfam:PF12662 Pfam:PF12661
GeneTree:ENSGT00690000101691 EMBL:CR354562 EMBL:CT027543
EMBL:CT027552 IPI:IPI00901902 ProteinModelPortal:E7FFP9
Ensembl:ENSDART00000112424 Bgee:E7FFP9 Uniprot:E7FFP9
Length = 1513
Score = 200 (75.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 54/146 (36%), Positives = 73/146 (50%)
Query: 49 CLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD-Q 105
C PG++G A P G +C + + P CD TG+C C G C+ +
Sbjct: 1358 CSPGFYGHLCQHACPVG-FHGHRCQL--LCDCGANAP-CDPETGRCLCPAGYQGLRCERE 1413
Query: 106 CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFS 163
CE+G + G C CDCD G + CDPI G+CLC PG TG+RC++ C N +G
Sbjct: 1414 CELGTF----GADCVHRCDCD--G--DTPCDPINGRCLCAPGKTGSRCDIGCGVNRFG-- 1463
Query: 164 LDGCKPCMCDPIGSNSLQCDP-SGQC 188
D + C C N QCDP +G+C
Sbjct: 1464 PDCSQRCEC----LNGGQCDPRNGRC 1485
Score = 187 (70.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 65/180 (36%), Positives = 81/180 (45%)
Query: 28 AGTTG-DCLK-CIYNTGGPQCD------TCLPGYFGDALALP--KG----DCE-PCQCYI 72
AG G C + C+ GG CD TC+ G+ G A L G DC+ C+C
Sbjct: 985 AGLYGVGCNQHCLCQNGG-SCDRISGHCTCVSGWTGVACELECAAGHFGMDCQHKCECVN 1043
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSL 130
G VCD+ +G+C C GT+C+ C G Y G GCK C CD
Sbjct: 1044 GG---------VCDRHSGRCLCPAGWTGTHCETACTQGFY----GPGCKERCRCDH---- 1086
Query: 131 NRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
N C ITG CLC G GT CE +C P YG C C P G++ C+ +GQC
Sbjct: 1087 NAACHHITGTCLCPAGWRGTHCEKVCLPGSYGKRC--AHRCQC-PHGTS---CNHVTGQC 1140
Score = 182 (69.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 45/108 (41%), Positives = 55/108 (50%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
VCD LTG CSC G C++ C G Y G C CDC N TCD +TG C
Sbjct: 1305 VCDALTGHCSCTLGWTGDTCEEVCPRGRY----GSDCSEVCDCKN----NSTCDRVTGVC 1356
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
LC PG G C+ P GF C+ +CD G+N+ CDP +G+C
Sbjct: 1357 LCSPGFYGHLCQHACP--VGFHGHRCQ-LLCD-CGANA-PCDPETGRC 1399
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 60/172 (34%), Positives = 74/172 (43%)
Query: 30 TTGDCLKCIY-NTGGPQCDTCLPGYFGDAL--ALPKG----DCE-PCQCYIPGTLETETF 81
T DC Y N G CD C G+ G P+G +C C+C GT
Sbjct: 473 TCDDCSNGGYCNAEGDACD-CPDGWTGILCNQTCPEGTFGKNCSFTCKCRNGGT------ 525
Query: 82 TPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITG 139
CD ++G+C C P V G C D C G Y G+ C K C+C G +RT G
Sbjct: 526 ---CDPISGKCRCPPGVNGDLCQDGCPKGMY----GKHCNKKCNCANNGRCHRTY----G 574
Query: 140 QCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQC 188
CLC PG+ G C L C YG GC C C + N+L+C G C
Sbjct: 575 ACLCDPGLYGRFCHLPCPKWSYG---SGCSSECQC--VQQNTLECHRRHGTC 621
Score = 170 (64.9 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/142 (30%), Positives = 65/142 (45%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPC--QCYIP-GTLETETFTPVCDQLTGQCS 93
C + TG C G + + LP + C +C P GT C+ +TGQC
Sbjct: 1090 CHHITGTCLCPAGWRGTHCEKVCLPGSYGKRCAHRCQCPHGTS--------CNHVTGQCG 1141
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C + G+ C++ C+ G + G C C C LN+ C P+TG C C PG G++
Sbjct: 1142 CPAGLTGSGCERMCQSGTF----GVNCNQVCQCS---ELNQLCHPVTGVCYCAPGYYGSK 1194
Query: 152 CEL-CQPNHYGFSLDGCKPCMC 172
CE C+ YG + + + C C
Sbjct: 1195 CETECEAGRYGPNCE--QECQC 1214
Score = 169 (64.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 55/163 (33%), Positives = 73/163 (44%)
Query: 31 TGDCLKCIYNTGGPQCDT-CLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG C C G +C+T C G +G P +CE CQC G VC
Sbjct: 1181 TGVCY-CAPGYYGSKCETECEAGRYG-----P--NCEQECQCLNNG---------VCKSS 1223
Query: 89 TGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
TG CSC P +G NC+ C +G Y G+ C G+ + DP+TG+C+CR G
Sbjct: 1224 TGTCSCPPGFIGPNCNITCPLGRY----GQDCAGVSLCGEGARS---DPLTGRCVCRAGQ 1276
Query: 148 TGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G C + C +G + D + C C SN CD +G C
Sbjct: 1277 RGRDCGKGCAEGWFGENCD--QRCNC----SNGGVCDALTGHC 1313
Score = 163 (62.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 57/164 (34%), Positives = 71/164 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DCEP-CQCYIPGTLETETFTPVCDQLT 89
C + +G C TCL G+ G P+G +C+ CQC G C +T
Sbjct: 875 CEHVSGA--C-TCLAGWTGTYCEKPCPEGFHGLECQQKCQCLNGGR---------CHPVT 922
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G C C VG C+ CE G + G C ++C C N TCDP G+C C G
Sbjct: 923 GGCQCPSGWVGPVCNATCEAGTF----GPACSQTCRCHN----NGTCDPADGRCECGAGW 974
Query: 148 TGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
TG+ CE C YG GC C+C GS CD SG C
Sbjct: 975 TGSSCEQECSAGLYGV---GCNQHCLCQNGGS----CDRISGHC 1011
Score = 162 (62.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 56/173 (32%), Positives = 73/173 (42%)
Query: 29 GTTGDCLKCIYNTGGPQCD----TCL--PGYFGDAL--ALPKGDCEPCQCYIPGTLETET 80
G C C + GG CD TC+ PG+ G+ P G C + + + E
Sbjct: 731 GCAESCPSC--DNGGV-CDRQNGTCVCSPGFMGNLCQNVCPDGHFG-LSCLLRCSCQNEG 786
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDC-DPVGSLNRTCDPI 137
C +TG C CK +G NC + C G + G C + CDC VGS CDP+
Sbjct: 787 ---KCHHVTGLCVCKDGWMGPNCAKACVAGRW----GPNCANQCDCRSSVGS----CDPV 835
Query: 138 TGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
G C C G G RC+ P GF C+ C C+ N C+ SG C
Sbjct: 836 IGLCHCEAGYMGPRCDQKCPQ--GFFGQSCQHRCQCE----NGAVCEHVSGAC 882
Score = 153 (58.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 60/180 (33%), Positives = 69/180 (38%)
Query: 29 GTTG-DC-LKCIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIP 73
GT G +C C GG CD C PG GD PKG C + C C
Sbjct: 508 GTFGKNCSFTCKCRNGGT-CDPISGKCRCPPGVNGDLCQDGCPKGMYGKHCNKKCNCANN 566
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLN 131
G C + G C C P + G C C Y G GC S C C +L
Sbjct: 567 GR---------CHRTYGACLCDPGLYGRFCHLPCPKWSY----GSGCSSECQCVQQNTLE 613
Query: 132 RTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C G C+C+PG G C C YG GC+ C C P G + C P SGQC
Sbjct: 614 --CHRRHGTCVCKPGYQGKTCNRECDSGFYG---PGCRLKCQC-PAG---VSCHPMSGQC 664
Score = 151 (58.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 57/170 (33%), Positives = 76/170 (44%)
Query: 35 LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTPV-CDQLTGQC 92
L+C G C C PGY G +C+ Y PG L+ + V C ++GQC
Sbjct: 612 LECHRRHG--TC-VCKPGYQGKTC---NRECDS-GFYGPGCRLKCQCPAGVSCHPMSGQC 664
Query: 93 S--CKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVT 148
C + G +CD +C +G + G GC CDC G+ C+ +TG+C C G T
Sbjct: 665 QRQCPAGLHGEHCDRECPMGQF----GVGCTQFCDCK--GA---PCNSVTGKCHCPAGQT 715
Query: 149 GTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCD-PSGQC---PGVFM 193
G CE C+ +G GC C P N CD +G C PG FM
Sbjct: 716 GQHCEKECEEGRWGL---GCAES-C-PSCDNGGVCDRQNGTCVCSPG-FM 759
Score = 145 (56.1 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 47/152 (30%), Positives = 67/152 (44%)
Query: 43 GPQCDT-CLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
GP+CD C G+FG + C+ CQC E VC+ ++G C+C G
Sbjct: 847 GPRCDQKCPQGFFGQS-------CQHRCQC------ENGA---VCEHVSGACTCLAGWTG 890
Query: 101 TNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPN 158
T C++ C G + + E + C C G C P+TG C C G G C C+
Sbjct: 891 TYCEKPCPEGFHGL---ECQQKCQCLNGGR----CHPVTGGCQCPSGWVGPVCNATCEAG 943
Query: 159 HYGFSLDGC-KPCMCDPIGSNSLQCDPS-GQC 188
+G C + C C G+ CDP+ G+C
Sbjct: 944 TFG---PACSQTCRCHNNGT----CDPADGRC 968
Score = 139 (54.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 40/114 (35%), Positives = 53/114 (46%)
Query: 86 DQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLC 143
D LTG+C C+ G +C + C G + GE C + C+C G CD +TG C C
Sbjct: 1264 DPLTGRCVCRAGQRGRDCGKGCAEGWF----GENCDQRCNCSNGG----VCDALTGHCSC 1315
Query: 144 RPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVF 192
G TG CE +C YG D + C C N+ CD +G C PG +
Sbjct: 1316 TLGWTGDTCEEVCPRGRYGS--DCSEVCDC----KNNSTCDRVTGVCLCSPGFY 1363
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCL 142
C+ C C G C+Q C G + G+ C +C C G TCDPI+G+C
Sbjct: 483 CNAEGDACDCPDGWTGILCNQTCPEGTF----GKNCSFTCKCRNGG----TCDPISGKCR 534
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVF 192
C PGV G C+ C YG + K C C +N+ +C + G C PG++
Sbjct: 535 CPPGVNGDLCQDGCPKGMYGKHCN--KKCNC----ANNGRCHRTYGACLCDPGLY 583
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 27/74 (36%), Positives = 34/74 (45%)
Query: 82 TPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITG 139
TP CD + G+C C P G+ CD C V + G C C+C G CDP G
Sbjct: 1433 TP-CDPINGRCLCAPGKTGSRCDIGCGVNRF----GPDCSQRCECLNGGQ----CDPRNG 1483
Query: 140 QCLCRPGVTGTRCE 153
+C C G G C+
Sbjct: 1484 RCTCLNGWIGPSCQ 1497
>UNIPROTKB|O75095 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR011489 InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS00010 EMBL:AL512413
EMBL:AB011539 EMBL:AB231860 EMBL:AL513320 IPI:IPI00306850
IPI:IPI00788209 RefSeq:NP_001400.3 UniGene:Hs.593645
ProteinModelPortal:O75095 SMR:O75095 IntAct:O75095
MINT:MINT-2797336 STRING:O75095 PhosphoSite:O75095 PaxDb:O75095
PRIDE:O75095 DNASU:1953 Ensembl:ENST00000294599
Ensembl:ENST00000356575 GeneID:1953 KEGG:hsa:1953 UCSC:uc001akk.3
UCSC:uc001akl.3 CTD:1953 GeneCards:GC01M003396 H-InvDB:HIX0000066
HGNC:HGNC:3232 HPA:HPA052129 MIM:604266 neXtProt:NX_O75095
PharmGKB:PA27665 HOGENOM:HOG000097840 HOVERGEN:HBG079790
OMA:QGAACDP GenomeRNAi:1953 NextBio:7915 Bgee:O75095
CleanEx:HS_MEGF6 Genevestigator:O75095 GermOnline:ENSG00000162591
Uniprot:O75095
Length = 1541
Score = 200 (75.5 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 63/167 (37%), Positives = 80/167 (47%)
Query: 33 DCLKCIYN-TGGPQCDTCL--PGYFGDALALPKGDCEP----CQCYIPGTLETETFTPVC 85
+C C N T P TC PG++G A P C P C G + P C
Sbjct: 1347 EC-SCHNNSTCEPATGTCRCGPGFYGQACEHP---CPPGFHGAGCQ--GLCWCQHGAP-C 1399
Query: 86 DQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLC 143
D ++G+C C G C++ CE G + GEGC + CDCD G+ CDP+TG CLC
Sbjct: 1400 DPISGRCLCPAGFHGHFCERGCEPGSF----GEGCHQRCDCDG-GA---PCDPVTGLCLC 1451
Query: 144 RPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
PG +G C L C+ +G S C CD G + CDP SGQC
Sbjct: 1452 PPGRSGATCNLDCRRGQFGPS---CT-LHCD-CGGGA-DCDPVSGQC 1492
Score = 181 (68.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 54/160 (33%), Positives = 69/160 (43%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
+C TG C CLPG+ G P G P C + + C TG CS
Sbjct: 794 RCDPETGA--C-LCLPGFVGSRCQDVCPAGWYGP-SCQTRCSCANDGH---CHPATGHCS 846
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P G +C + C+ GH+ G C C+C G + +CD I+G CLC G G R
Sbjct: 847 CAPGWTGFSCQRACDTGHW----GPDCSHPCNCS-AG--HGSCDAISGLCLCEAGYVGPR 899
Query: 152 CEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
CE C H+G GC+ C C + CD SG C
Sbjct: 900 CEQQCPQGHFG---PGCEQRCQCQ----HGAACDHVSGAC 932
Score = 180 (68.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 57/163 (34%), Positives = 70/163 (42%)
Query: 33 DCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQLTG 90
D C G C +TC P FG +C C C GT CD +TG
Sbjct: 538 DGCDCPEGWTGLICNETCPPDTFGK-------NCSFSCSCQNGGT---------CDSVTG 581
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C C P V GTNC D C G+Y G+ C K C+C G C + G CLC PG+
Sbjct: 582 ACRCPPGVSGTNCEDGCPKGYY----GKHCRKKCNCANRGR----CHRLYGACLCDPGLY 633
Query: 149 GTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
G C L C P +G GC + C C + ++ CD G C
Sbjct: 634 GRFCHLTCPPWAFG---PGCSEECQC--VQPHTQSCDKRDGSC 671
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/176 (33%), Positives = 74/176 (42%)
Query: 29 GTTG-DCLKCIYNTG-GPQCD------TCLPGYFGDALA--LPKGDCEP-CQCYIPGTLE 77
G+ G DC + G P C +C GY G + P G P C+ + G L
Sbjct: 1165 GSFGEDCAQMCQCPGENPACHPATGTCSCAAGYHGPSCQQRCPPGRYGPGCE-QLCGCLN 1223
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCD 135
+ CD TG C C +GT+C+ C G + G C C C G+ CD
Sbjct: 1224 GGS----CDAATGACRCPTGFLGTDCNLTCPQGRF----GPNCTHVCGCGQ-GA---ACD 1271
Query: 136 PITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
P+TG CLC PG G RCE C N +G GC+ C C N C S G C
Sbjct: 1272 PVTGTCLCPPGRAGVRCERGCPQNRFGV---GCEHTCSC----RNGGLCHASNGSC 1320
Score = 166 (63.5 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 62/184 (33%), Positives = 78/184 (42%)
Query: 20 PSDILKSVAGTTGD-CL-KCIYNTGGPQCD------TCLPGYFGDAL---ALPKGDCEPC 68
PS + AG GD C C+ GG CD C G+ G A LP+ C
Sbjct: 1027 PSCLQACPAGLYGDNCRHSCLCQNGGT-CDPVSGHCACPEGWAGLACEKECLPRDVRAGC 1085
Query: 69 QCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDP 126
+ + G L +CD TG+C C G C C G + GE C + C C P
Sbjct: 1086 R-HSGGCLNGG----LCDPHTGRCLCPAGWTGDKCQSPCLRGWF----GEACAQRCSCPP 1136
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS 185
G+ C +TG C C PG TG+ CE C P +G D + C C P G N C P+
Sbjct: 1137 -GA---ACHHVTGACRCPPGFTGSGCEQACPPGSFGE--DCAQMCQC-P-GENPA-CHPA 1187
Query: 186 -GQC 188
G C
Sbjct: 1188 TGTC 1191
Score = 162 (62.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 41/108 (37%), Positives = 52/108 (48%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C +TGQC C P G +C+ C G + G GC+ C P CDP TG CLC
Sbjct: 751 CHGVTGQCRCPPGRTGEDCEADCPEGRW----GLGCQEI-C-PACQHAARCDPETGACLC 804
Query: 144 RPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQC 188
PG G+RC+ +C YG S C+ C C +N C P+ G C
Sbjct: 805 LPGFVGSRCQDVCPAGWYGPS---CQTRCSC----ANDGHCHPATGHC 845
Score = 159 (61.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 55/171 (32%), Positives = 72/171 (42%)
Query: 37 CIYNTGGPQCDTCLPGYFG-DA-LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSC 94
C TG +C T G+ G D L P+G P ++ G + CD +TG C C
Sbjct: 1227 CDAATGACRCPT---GFLGTDCNLTCPQGRFGPNCTHVCGCGQGAA----CDPVTGTCLC 1279
Query: 95 KPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
P G C++ C + G GC+ +C C G L C G C C G TG C
Sbjct: 1280 PPGRAGVRCERGCPQNRF----GVGCEHTCSCRN-GGL---CHASNGSCSCGLGWTGRHC 1331
Query: 153 EL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC---PGVFMNRAE 197
EL C P YG + C C C N+ C+P+ G C PG + E
Sbjct: 1332 ELACPPGRYGAA---CHLECSCH----NNSTCEPATGTCRCGPGFYGQACE 1375
Score = 150 (57.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 52/162 (32%), Positives = 64/162 (39%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTGQ 91
C + +G C G F + A P G DC C C T CD + G
Sbjct: 925 CDHVSGACTCPAGWRGTFCEH-ACPAGFFGLDCRSACNC---------TAGAACDAVNGS 974
Query: 92 CSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C C G C + C Y G C ++C C S CDP+ GQC C PG G
Sbjct: 975 CLCPAGRRGPRCAETCPAHTY----GHNCSQACACFNGAS----CDPVHGQCHCAPGWMG 1026
Query: 150 TRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C + C YG D C+ C+C G+ CDP SG C
Sbjct: 1027 PSCLQACPAGLYG---DNCRHSCLCQNGGT----CDPVSGHC 1061
Score = 145 (56.1 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 53/174 (30%), Positives = 71/174 (40%)
Query: 33 DC-LKCIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLET 78
+C C GG CD+ C PG G PKG C + C C G
Sbjct: 563 NCSFSCSCQNGGT-CDSVTGACRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGR--- 618
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
C +L G C C P + G C C + G GC +C V ++CD
Sbjct: 619 ------CHRLYGACLCDPGLYGRFCHLTCPPWAF----GPGCSE-ECQCVQPHTQSCDKR 667
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
G C C+ G G RC+ C+ ++G GC + C C P+G + CD SG+C
Sbjct: 668 DGSCSCKAGFRGERCQAECELGYFG---PGCWQACTC-PVG---VACDSVSGEC 714
Score = 139 (54.0 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 49/157 (31%), Positives = 70/157 (44%)
Query: 45 QCDTCLPGYFGDAL--ALPKG----DCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
QC C PG+ G + A P G +C C C GT CD ++G C+C
Sbjct: 1017 QCH-CAPGWMGPSCLQACPAGLYGDNCRHSCLCQNGGT---------CDPVSGHCACPEG 1066
Query: 98 VVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNR-TCDPITGQCLCRPGVTGTRCELCQ 156
G C++ E ++ +G C+ G LN CDP TG+CLC G TG +C+
Sbjct: 1067 WAGLACEK-ECLPRDVRAG--CRHSG----GCLNGGLCDPHTGRCLCPAGWTGDKCQ--S 1117
Query: 157 PNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQCPGVF 192
P G+ + C + C C P G+ + +CP F
Sbjct: 1118 PCLRGWFGEACAQRCSCPP-GAACHHVTGACRCPPGF 1153
Score = 132 (51.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 52/176 (29%), Positives = 70/176 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG CL C+ G +C D C G++G + C+ C C G C
Sbjct: 799 TGACL-CLPGFVGSRCQDVCPAGWYGPS-------CQTRCSCANDGH---------CHPA 841
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCD-----CDPVGSLNRTCDP--ITGQ 140
TG CSC P G +C + C+ GH+ C +C CD + L C+ + +
Sbjct: 842 TGHCSCAPGWTGFSCQRACDTGHWGPDCSHPC-NCSAGHGSCDAISGLC-LCEAGYVGPR 899
Query: 141 C--LCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
C C G G CE CQ H G + D C C P G C+ + CP F
Sbjct: 900 CEQQCPQGHFGPGCEQRCQCQH-GAACDHVSGACTC-PAGWRGTFCEHA--CPAGF 951
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 47/137 (34%), Positives = 59/137 (43%)
Query: 28 AGTTGDCLKCIYNTGGPQCDT----CL-P-GYFGDALALPKGDCEPCQ----CYIPGTLE 77
AG G C C + G P CD CL P G+ G +G CEP C+ +
Sbjct: 1385 AGCQGLCW-CQH--GAP-CDPISGRCLCPAGFHGHFCE--RG-CEPGSFGEGCH--QRCD 1435
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCD 135
+ P CD +TG C C P G C+ C G + G C CDC G + CD
Sbjct: 1436 CDGGAP-CDPVTGLCLCPPGRSGATCNLDCRRGQF----GPSCTLHCDCG--GGAD--CD 1486
Query: 136 PITGQCLCRPGVTGTRC 152
P++GQC C G G C
Sbjct: 1487 PVSGQCHCVDGYMGPTC 1503
>UNIPROTKB|F1S575 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 OMA:YCECFGH
EMBL:CU179665 EMBL:CU407227 Ensembl:ENSSSCT00000007505
Uniprot:F1S575
Length = 469
Score = 192 (72.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 57/173 (32%), Positives = 81/173 (46%)
Query: 30 TTG-DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETF--TPVCD 86
TTG DC KC N G PG + L +PKG C I E F + C
Sbjct: 244 TTGPDCGKCKKNYQGRPWS---PGSY---LPIPKGTANTCIPSISSIGNCECFGHSNRCS 297
Query: 87 QL----TGQC-SCKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDCDPVGSLNRTCDP 136
+ T C SCK + G +C+ C +G++ S E C C C+P+GS++ C+
Sbjct: 298 YIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAELDDENVCIECYCNPLGSVHDRCNG 357
Query: 137 ITGQCLCRPGVTGTRCELCQP-NHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+G C C+ G TG +C+ C P N + + GC+P +CD + L C G C
Sbjct: 358 -SGFCECKTGTTGPKCDECLPGNSWHY---GCQPNVCD---NELLHCQNGGTC 403
Score = 141 (54.7 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 42/128 (32%), Positives = 56/128 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C+ C GYF +A A + C C C G++ C+ +G
Sbjct: 307 CVSCKHNTRGQHCELCRLGYFRNASAELDDENVCIECYCNPLGSVHDR-----CNG-SGF 360
Query: 92 CSCKPHVVGTNCDQCEVG---HYNIISGEGCKS--CDCDPVGSLNR-TCDPITGQCLCRP 145
C CK G CD+C G HY GC+ CD + + N TC +CLC
Sbjct: 361 CECKTGTTGPKCDECLPGNSWHY------GCQPNVCDNELLHCQNGGTCHNNV-RCLCPA 413
Query: 146 GVTGTRCE 153
TG CE
Sbjct: 414 AYTGILCE 421
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 191 (72.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 55/172 (31%), Positives = 80/172 (46%)
Query: 30 TTG-DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETF--TPVCD 86
TTG DC KC N G PG + L +PKG C I E F + C
Sbjct: 239 TTGPDCGKCKKNYQGRPWS---PGSY---LPIPKGTANTCIPSISSIGNCECFGHSNRCS 292
Query: 87 QL----TGQC-SCKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDCDPVGSLNRTCDP 136
+ T C SCK + G +C+ C +G++ S + C C C+P+GS++ C+
Sbjct: 293 YIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNG 352
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+G C C+ G TG +C+ C P + + GC+P +CD + L C G C
Sbjct: 353 -SGFCECKTGTTGPKCDECLPGNSWYY--GCQPNVCD---NELLHCQNGGTC 398
Score = 137 (53.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 39/125 (31%), Positives = 55/125 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C+ C GYF +A A + C C C G++ C+ +G
Sbjct: 302 CVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDR-----CNG-SGF 355
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKS--CDCDPVGSLNR-TCDPITGQCLCRPGVT 148
C CK G CD+C G+ GC+ CD + + N TC +C+C T
Sbjct: 356 CECKTGTTGPKCDECLPGNSWYY---GCQPNVCDNELLHCQNGGTCHNNV-RCVCPDAYT 411
Query: 149 GTRCE 153
G CE
Sbjct: 412 GILCE 416
>ZFIN|ZDB-GENE-050208-475 [details] [associations]
symbol:lama3 "laminin, alpha 3" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-050208-475 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 EMBL:BX465190 Pfam:PF02210 GO:GO:0045995
GO:GO:0005606 GeneTree:ENSGT00700000104042 IPI:IPI00994085
Ensembl:ENSDART00000126827 Bgee:F1QV32 Uniprot:F1QV32
Length = 1681
Score = 199 (75.1 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 50/155 (32%), Positives = 70/155 (45%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC------SCKPHVVGTN 102
C GY+ + KG C PC C L + CD TG+C +C+ G +
Sbjct: 10 CDRGYYRERSGPYKGRCVPCNC---NGLSGD-----CDPHTGKCLLKYFTACQHKYAGDH 61
Query: 103 CDQCEVGHYNIISGEGCKSCDC---DPVGSLNRTCDPITGQ--CLCRPGVTGTRCELCQP 157
C++C G+Y C+ C C DP S C + + CLC+PG +G RCE C
Sbjct: 62 CERCMEGYYGSAILRTCRMCPCPLTDPAKSFAVGCLGVGDEFECLCKPGYSGVRCERCAL 121
Query: 158 NHYGFSL---DGCKPCMCDPIGSNSLQCDP-SGQC 188
+YG L C+PC C+ + CDP +G C
Sbjct: 122 GYYGSPLAERGSCQPCDCE----HGYVCDPLTGDC 152
Score = 171 (65.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 41/122 (33%), Positives = 58/122 (47%)
Query: 31 TGDCL-----KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVC 85
TG CL C + G C+ C+ GY+G A+ C C C P T ++F C
Sbjct: 42 TGKCLLKYFTACQHKYAGDHCERCMEGYYGSAILRT---CRMCPC--PLTDPAKSFAVGC 96
Query: 86 ----DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGE--GCKSCDCDPVGSLNRTCDPITG 139
D+ +C CKP G C++C +G+Y E C+ CDC+ G + CDP+TG
Sbjct: 97 LGVGDEF--ECLCKPGYSGVRCERCALGYYGSPLAERGSCQPCDCEH-GYV---CDPLTG 150
Query: 140 QC 141
C
Sbjct: 151 DC 152
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 35/99 (35%), Positives = 46/99 (46%)
Query: 15 LCVGPPSDILKSVA-GT--TGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQ 69
+C P +D KS A G GD +C+ G G +C+ C GY+G LA +G C+PC
Sbjct: 80 MCPCPLTDPAKSFAVGCLGVGDEFECLCKPGYSGVRCERCALGYYGSPLA-ERGSCQPCD 138
Query: 70 CYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEV 108
C G VCD LTG C NC C++
Sbjct: 139 CE-HGY--------VCDPLTGDCYEADDPDTDNCFDCDI 168
>WB|WBGene00013416 [details] [associations]
symbol:Y64G10A.7 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF00008 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
InterPro:IPR009030 SUPFAM:SSF57184 InterPro:IPR026823 Pfam:PF12662
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:AL110498
EMBL:AL117206 GeneID:178377 KEGG:cel:CELE_Y64G10A.7 CTD:178377
RefSeq:NP_001255802.1 ProteinModelPortal:G5EFX3 SMR:G5EFX3
EnsemblMetazoa:Y64G10A.7b WormBase:Y64G10A.7b OMA:RIEMEVI
Uniprot:G5EFX3
Length = 1714
Score = 198 (74.8 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 61/178 (34%), Positives = 78/178 (43%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G+C+ C G +CD TC G FG KG C CQ G CD +TG
Sbjct: 1022 GECI-CPPGKKGHKCDETCDSGLFGAGC---KGICS-CQ---NGA--------TCDSVTG 1065
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNR------TCDPITGQCL 142
C C+P G CD+ C G + GEGC + CDC + CD +TG+C
Sbjct: 1066 SCECRPGWRGKKCDRPCPDGRF----GEGCNAICDCTTTNDTSMYNPFVARCDHVTGECR 1121
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SG--QCPGVFMNR 195
C G TG C+ C +G +GC+ C C SN CD +G CP FM +
Sbjct: 1122 CPAGWTGPDCQTSCPLGRHG---EGCRHSCQC----SNGASCDRVTGFCDCPSGFMGK 1172
Score = 185 (70.2 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 55/164 (33%), Positives = 81/164 (49%)
Query: 31 TGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG C +C+ G C+ +C+ G++G CE C+C G L CD +
Sbjct: 1246 TGRC-ECLPGWSGEHCEKSCVSGHYG-------AKCEETCECE-NGAL--------CDPI 1288
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPG 146
+G CSC+P G C++ C G++ G C +SC C + +++CD I+G+C C G
Sbjct: 1289 SGHCSCQPGWRGKKCNRPCLKGYF----GRHCSQSCRC----ANSKSCDHISGRCQCPKG 1340
Query: 147 VTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G C ELC +G + C CD G NS+ CD SG+C
Sbjct: 1341 YAGHSCTELCPDGTFG---ESCSQ-KCD-CGENSM-CDAISGKC 1378
Score = 184 (69.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 55/178 (30%), Positives = 77/178 (43%)
Query: 31 TGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C C+ GP CD +C P +G A C C + G CD+
Sbjct: 892 TGTCT-CLPGKTGPLCDQSCAPNTYGPNCA------HTCSC-VNGAK--------CDESD 935
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G C C P G C + C G + I + CK C G++ CD G C C PG +
Sbjct: 936 GSCHCTPGFYGATCSEVCPTGRFGIDCMQLCK---CQN-GAI---CDTSNGSCECAPGWS 988
Query: 149 GTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAEMSSD 201
G +C+ C P +G D K C C ++ + CDPS G+C PG ++ + + D
Sbjct: 989 GKKCDKACAPGTFG--KDCSKKCDC----ADGMHCDPSDGECICPPGKKGHKCDETCD 1040
Score = 182 (69.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 59/175 (33%), Positives = 74/175 (42%)
Query: 31 TGDCLKCIYNTGGPQCDT-CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C +C G C C PG FG A+ C C P + CD +T
Sbjct: 798 TGKC-RCKPGYYGHHCKRMCSPGLFGAGCAMK------CSC--PAGIR-------CDPVT 841
Query: 90 GQCS--CKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRT--CDPITGQCLC 143
G C+ C G CDQ C G++ G C+ C C V S +++ C +TG C C
Sbjct: 842 GDCTKKCPAGYQGNLCDQPCPAGYF----GYDCEQKCSCADVASPHKSKVCHHVTGTCTC 897
Query: 144 RPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC---PGVF 192
PG TG C+ C PN YG C C C N +CD S G C PG +
Sbjct: 898 LPGKTGPLCDQSCAPNTYG---PNCAHTCSC----VNGAKCDESDGSCHCTPGFY 945
Score = 178 (67.7 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 59/180 (32%), Positives = 77/180 (42%)
Query: 33 DCLKCIYNTGGPQCDT------CLPGYFG---DALALPK--G-DC-EPCQCYIPGTLETE 79
DC++ G CDT C PG+ G D P G DC + C C G
Sbjct: 961 DCMQLCKCQNGAICDTSNGSCECAPGWSGKKCDKACAPGTFGKDCSKKCDC-ADGMH--- 1016
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPI 137
CD G+C C P G CD+ C+ G + G GCK C C G+ TCD +
Sbjct: 1017 -----CDPSDGECICPPGKKGHKCDETCDSGLF----GAGCKGICSCQN-GA---TCDSV 1063
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSL------QCDP-SGQC 188
TG C CRPG G +C+ C +G +GC C C S+ +CD +G+C
Sbjct: 1064 TGSCECRPGWRGKKCDRPCPDGRFG---EGCNAICDCTTTNDTSMYNPFVARCDHVTGEC 1120
Score = 177 (67.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 43/110 (39%), Positives = 56/110 (50%)
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC 141
VCD TG C C P +GT C+ C+ + G C K C+C+ G TCD +TGQC
Sbjct: 1413 VCDSSTGSCVCPPGYIGTKCEIACQSDRF----GPTCEKICNCENGG----TCDRLTGQC 1464
Query: 142 LCRPGVTGTRC-ELCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQC 188
C PG TG C ++C +G GCK C C +N C+ S G+C
Sbjct: 1465 RCLPGFTGMTCNQVCPEGRFGA---GCKEKCRC----ANG-HCNASSGEC 1506
Score = 169 (64.5 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 50/160 (31%), Positives = 73/160 (45%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C C +TG +C+ P D P G QC + ++ CD + G C+
Sbjct: 704 CKLCDPSTGSCRCED--PEKCSDG-PCPDG-FYGSQCNLKCRMDCPNGR--CDPVFGYCT 757
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C + G +C++ C H+ G+ C+ C C S CD ITG+C C+PG G
Sbjct: 758 CPDGLYGQSCEKPCP--HFTF--GKNCRFPCKCARENS--EGCDEITGKCRCKPGYYGHH 811
Query: 152 CE-LCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C+ +C P +G GC C C P G ++CDP +G C
Sbjct: 812 CKRMCSPGLFGA---GCAMKCSC-PAG---IRCDPVTGDC 844
Score = 162 (62.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 63/196 (32%), Positives = 80/196 (40%)
Query: 16 CVGPPSDI-LKSVAGTTGD-----CLK-CIYNTGGPQCDT------CLPGYFGDAL--AL 60
CV PP I K D C K C GG CD CLPG+ G
Sbjct: 1421 CVCPPGYIGTKCEIACQSDRFGPTCEKICNCENGGT-CDRLTGQCRCLPGFTGMTCNQVC 1479
Query: 61 PKG----DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNII 114
P+G C E C+C G C+ +G+C C G +C+Q C G Y
Sbjct: 1480 PEGRFGAGCKEKCRC-ANGH---------CNASSGECKCNLGFTGPSCEQSCPSGKY--- 1526
Query: 115 SGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPN-HYGFSLDGCKPCMCD 173
G C + DC+ G CDP+ G C C PG G+RC+ PN YG+ + C C
Sbjct: 1527 -GLNC-TLDCECYGQAR--CDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCS--QSCSCQ 1580
Query: 174 PIGSNSLQCDPS-GQC 188
N CD + G+C
Sbjct: 1581 ----NGAHCDGADGRC 1592
Score = 160 (61.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 59/199 (29%), Positives = 85/199 (42%)
Query: 27 VAGTTG-DCLKCIYNTGGPQCD------TCLPGYFGDALALP--KG----DC-EPCQCYI 72
V+G G C + G CD +C PG+ G P KG C + C+C
Sbjct: 1265 VSGHYGAKCEETCECENGALCDPISGHCSCQPGWRGKKCNRPCLKGYFGRHCSQSCRC-- 1322
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSL 130
+ CD ++G+C C G +C + C G + GE C + CDC G
Sbjct: 1323 -------ANSKSCDHISGRCQCPKGYAGHSCTELCPDGTF----GESCSQKCDC---GE- 1367
Query: 131 NRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
N CD I+G+C C+PG +G+ C+ C +G D + C C+ N CD S G C
Sbjct: 1368 NSMCDAISGKCFCKPGHSGSDCKSGCVQGRFG--PDCNQLCSCE----NGGVCDSSTGSC 1421
Query: 189 ---PGVFMNRAEMSSDDVR 204
PG + E++ R
Sbjct: 1422 VCPPGYIGTKCEIACQSDR 1440
Score = 148 (57.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 51/163 (31%), Positives = 67/163 (41%)
Query: 31 TGDCLKCIYNTGGPQCDTCLP-GYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+C +C GP C T P G G+ G CQC + CD++T
Sbjct: 1117 TGEC-RCPAGWTGPDCQTSCPLGRHGE------GCRHSCQCSNGAS---------CDRVT 1160
Query: 90 GQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G C C +G NC+ +C G + G C K C C G N+ G C C G
Sbjct: 1161 GFCDCPSGFMGKNCESECPEGLW----GSNCMKHCLCMHGGECNKE----NGDCECIDGW 1212
Query: 148 TGTRCELCQPNHYG-FSLDGCKPCMCDPIGSNSLQCD-PSGQC 188
TG CE P +G F + + C C N CD +G+C
Sbjct: 1213 TGPSCEFLCP--FGQFGRNCAQRCNC----KNGASCDRKTGRC 1249
Score = 145 (56.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 37/108 (34%), Positives = 49/108 (45%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
C++ G C C G +C+ C G + G C + C+C S CD TG+C
Sbjct: 1199 CNKENGDCECIDGWTGPSCEFLCPFGQF----GRNCAQRCNCKNGAS----CDRKTGRCE 1250
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C PG +G CE C HYG + + C C+ N CDP SG C
Sbjct: 1251 CLPGWSGEHCEKSCVSGHYGAKCE--ETCECE----NGALCDPISGHC 1292
Score = 137 (53.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 49/154 (31%), Positives = 61/154 (39%)
Query: 46 CDTCLPGYFGDA--LALPKGD----C-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHV 98
CD C PG +G + P G C + C C G CD G+C C
Sbjct: 1549 CD-CPPGRYGSRCQFSCPNGFYGWYCSQSCSCQ-NGAH--------CDGADGRCLCPAGF 1598
Query: 99 VGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-C 155
G C+Q C G + G C + C+C G CD G+C+C G G CE C
Sbjct: 1599 QGDKCEQKCSEGSF----GPACSQQCNC---GKYK--CDATDGKCICPVGRHGPLCEEEC 1649
Query: 156 QPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+P YG S C C N CD +GQC
Sbjct: 1650 RPGRYGQSCQN--KCQC----FNGATCDARTGQC 1677
Score = 130 (50.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 45/155 (29%), Positives = 64/155 (41%)
Query: 40 NTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTGQCSCKPHV 98
N +C C G+ G + + C + + TL+ E + CD + G C C P
Sbjct: 1500 NASSGECK-CNLGFTGPSC---EQSCPSGKYGLNCTLDCECYGQARCDPVQGCCDCPPGR 1555
Query: 99 VGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-C 155
G+ C C G Y G C +SC C G+ CD G+CLC G G +CE C
Sbjct: 1556 YGSRCQFSCPNGFY----GWYCSQSCSCQN-GA---HCDGADGRCLCPAGFQGDKCEQKC 1607
Query: 156 QPNHYGFSLDGC-KPCMCDPIGSNSLQCDPS-GQC 188
+G C + C C +CD + G+C
Sbjct: 1608 SEGSFG---PACSQQCNC-----GKYKCDATDGKC 1634
Score = 121 (47.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/79 (37%), Positives = 39/79 (49%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD G+C C G C++ C G Y G+ C++ C C G+ TCD TGQC
Sbjct: 1627 CDATDGKCICPVGRHGPLCEEECRPGRY----GQSCQNKCQCFN-GA---TCDARTGQCS 1678
Query: 143 CRPGVTGTRC--ELCQPNH 159
C PG G C E+ PN+
Sbjct: 1679 CSPGWLGPTCQIEMMDPNN 1697
Score = 41 (19.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 24 LKSVAGTTGDCLK-CIYNTGGPQCDTCLPGY 53
+ + G C + C GG C +C PG+
Sbjct: 506 ISECSSNNGGCEQICSNQEGGYMC-SCEPGF 535
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 191 (72.3 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 55/172 (31%), Positives = 80/172 (46%)
Query: 30 TTG-DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETF--TPVCD 86
TTG DC KC N G PG + L +PKG C I E F + C
Sbjct: 321 TTGPDCGKCKKNYQGRPWS---PGSY---LPIPKGTANTCIPSISSIGNCECFGHSNRCS 374
Query: 87 QL----TGQC-SCKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDCDPVGSLNRTCDP 136
+ T C SCK + G +C+ C +G++ S + C C C+P+GS++ C+
Sbjct: 375 YIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNG 434
Query: 137 ITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+G C C+ G TG +C+ C P + + GC+P +CD + L C G C
Sbjct: 435 -SGFCECKTGTTGPKCDECLPGNSWYY--GCQPNVCD---NELLHCQNGGTC 480
Score = 136 (52.9 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 39/125 (31%), Positives = 54/125 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C+ C GYF +A A + C C C G++ C+ +G
Sbjct: 384 CVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDR-----CNG-SGF 437
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKS--CDCDPVGSLNR-TCDPITGQCLCRPGVT 148
C CK G CD+C G+ GC+ CD + + N TC +C C T
Sbjct: 438 CECKTGTTGPKCDECLPGNSWYY---GCQPNVCDNELLHCQNGGTCQNNV-RCACPDAYT 493
Query: 149 GTRCE 153
G CE
Sbjct: 494 GILCE 498
>RGD|1582797 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10116
"Rattus norvegicus" [GO:0010842 "retina layer formation"
evidence=ISO] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISO] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 RGD:1582797 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS50027 Pfam:PF12661
GeneTree:ENSGT00690000101691 IPI:IPI00959176
Ensembl:ENSRNOT00000050649 Uniprot:F1M370
Length = 1094
Score = 195 (73.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 65/189 (34%), Positives = 84/189 (44%)
Query: 29 GTTG-DCLK-CIYNTGGPQCDT------CLPGYFGDALA--LPKGD----C-EPCQCYIP 73
GT G +C + C + GG QCD C GY GD P G C + C C+
Sbjct: 263 GTFGQNCSQDCPCHHGG-QCDHVTGQCHCTAGYMGDRCQEECPFGTFGFRCSQRCDCHNG 321
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ--CEVGHYNIISGEGCKS-CDCDPVGSL 130
G C TG C C+P G +C + C G + G GC S C CD ++
Sbjct: 322 GQ---------CSPATGACECEPGYKGPSCQERLCPEG----LHGPGCTSPCPCDTENTI 368
Query: 131 NRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQ 187
+ C P+TG C C+PG +G C E C +YG +GC+ PC C N C +G
Sbjct: 369 S--CHPVTGACTCQPGWSGHYCNESCPAGYYG---NGCQLPCTCQ----NGADCHSITGS 419
Query: 188 C---PGVFM 193
C PG FM
Sbjct: 420 CTCAPG-FM 427
Score = 180 (68.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 54/164 (32%), Positives = 68/164 (41%)
Query: 28 AGTTG-DCLKCIYNTGGPQCD------TCLPGYFGDALALPKGD------C-EPCQCYIP 73
+GT G +C + G C C PG+ GD+ LP D C E C C
Sbjct: 480 SGTWGLNCNESCVCANGAACSPFDGSCACTPGWLGDSCELPCPDGTFGLNCSEHCDC--- 536
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLN 131
+ CD +TG C C G CD C G + G C SC C+ GS
Sbjct: 537 ------SHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRW----GPNCSVSCSCENGGS-- 584
Query: 132 RTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGC-KPC-MC 172
C P+ G C C PG G C+ +C P YG GC +PC +C
Sbjct: 585 --CSPVDGSCECAPGFRGPLCQRICPPGFYGH---GCAQPCPLC 623
Score = 175 (66.7 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 61/176 (34%), Positives = 75/176 (42%)
Query: 29 GTTG-DCL-KCIYNTGGPQCDT------CLPGYFGDALA---LPKGDCEPCQCYIPGTLE 77
GT G C +C + GG QC C PGY G + P+G P C P +
Sbjct: 306 GTFGFRCSQRCDCHNGG-QCSPATGACECEPGYKGPSCQERLCPEGLHGP-GCTSPCPCD 363
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCD 135
TE T C +TG C+C+P G C++ C G+Y G GC+ C C G+ C
Sbjct: 364 TEN-TISCHPVTGACTCQPGWSGHYCNESCPAGYY----GNGCQLPCTCQN-GA---DCH 414
Query: 136 PITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
ITG C C PG G C + C YG C C C SN C P G C
Sbjct: 415 SITGSCTCAPGFMGEVCAVPCAAGTYG---PNCSSVCSC----SNGGTCSPVDGSC 463
Score = 169 (64.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 62/182 (34%), Positives = 78/182 (42%)
Query: 28 AGTTG-DCLK-CIYNTGG---P---QCDTCLPGYFG-D-ALALPKG----DC-EPCQCYI 72
AGT G +C C + GG P C TC G+ G D +L P G +C E C C
Sbjct: 437 AGTYGPNCSSVCSCSNGGTCSPVDGSC-TCREGWQGLDCSLPCPSGTWGLNCNESCVC-A 494
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLN 131
G C G C+C P +G +C+ C G + + E CDC
Sbjct: 495 NGA--------ACSPFDGSCACTPGWLGDSCELPCPDGTFGLNCSE---HCDCSHADG-- 541
Query: 132 RTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQC- 188
CDP+TG C C G TG RC+ C P +G C C C+ GS S D S +C
Sbjct: 542 --CDPVTGHCCCLAGWTGIRCDSTCPPGRWG---PNCSVSCSCENGGSCS-PVDGSCECA 595
Query: 189 PG 190
PG
Sbjct: 596 PG 597
Score = 167 (63.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 47/146 (32%), Positives = 67/146 (45%)
Query: 31 TGDCL--KCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYIPGTLETETFTPVCDQ 87
T +C+ +C+ P C PG+ G + G D E + + + +C+
Sbjct: 102 TEECMHGRCV----SPDTCHCEPGWGGPDCS--SGCDSEHWGPHCSNRCQCQNGA-LCNP 154
Query: 88 LTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRP 145
+TG C C P G C++ C G + G+GC+ C C S CDP TG+CLC P
Sbjct: 155 ITGACVCAPGFRGWRCEEFCAPGTH----GKGCQLLCQCHHGAS----CDPRTGECLCAP 206
Query: 146 GVTGTRCE-LCQPNHYGFSLDGCKPC 170
G TG CE LC P +G + PC
Sbjct: 207 GYTGVYCEELCPPGSHGAHCELRCPC 232
Score = 158 (60.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 52/153 (33%), Positives = 67/153 (43%)
Query: 49 CLPGYFG---DALALP----KGDCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
C PG+ G + P KG C+ CQC+ + CD TG+C C P G
Sbjct: 161 CAPGFRGWRCEEFCAPGTHGKG-CQLLCQCHHGAS---------CDPRTGECLCAPGYTG 210
Query: 101 TNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQP 157
C++ C G + G C+ C C G TC ITG+C C PG TG C + C P
Sbjct: 211 VYCEELCPPGSH----GAHCELRCPCQNGG----TCHHITGECACPPGWTGAVCAQPCPP 262
Query: 158 NHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C + C C G QCD +GQC
Sbjct: 263 GTFG---QNCSQDCPCHHGG----QCDHVTGQC 288
Score = 158 (60.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 56/168 (33%), Positives = 73/168 (43%)
Query: 6 HHVSVMDILLCV-GPPSDILKSVA--GTTG-DCLK---CIYN-TGGP---QCDTCLPGYF 54
HHVS I C+ G + V G G DC + C N T P C C PG+
Sbjct: 631 HHVS--GICECLPGFSGALCNQVCAGGHFGQDCAQLCSCANNGTCSPIDGSCQ-CFPGWT 687
Query: 55 GD--ALALPKG----DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-C 106
G + P DC CQC + CD +TG+C+C+ G +C+Q C
Sbjct: 688 GKDCSQGCPAAFFGKDCGHICQCQNGAS---------CDHITGKCTCRTGFSGRHCEQRC 738
Query: 107 EVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE 153
G + G GC+ C+C N TCD +TG C C PG G RC+
Sbjct: 739 APGTF----GYGCQQLCEC----MNNATCDHVTGTCYCSPGFKGIRCD 778
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/149 (32%), Positives = 64/149 (42%)
Query: 49 CLPGYFG---DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ 105
CL G+ G D+ P G P C + + E C + G C C P G C +
Sbjct: 551 CLAGWTGIRCDSTC-PPGRWGP-NCSVSCSCENGGS---CSPVDGSCECAPGFRGPLCQR 605
Query: 106 -CEVGHYNIISGEGCKSCDCDPVGSLNR-TCDPITGQCLCRPGVTGTRC-ELCQPNHYGF 162
C G Y G GC C P+ +R C ++G C C PG +G C ++C H+G
Sbjct: 606 ICPPGFY----GHGCAQ-PC-PLCVHSRGPCHHVSGICECLPGFSGALCNQVCAGGHFG- 658
Query: 163 SLDGCKPCMCDPIGSNSLQCDPSGQC-PG 190
D + C C G+ S D S QC PG
Sbjct: 659 -QDCAQLCSCANNGTCS-PIDGSCQCFPG 685
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 53/186 (28%), Positives = 73/186 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQL 88
TG+C C G C C PG FG +C + C C+ G CD +
Sbjct: 242 TGECA-CPPGWTGAVCAQPCPPGTFGQ-------NCSQDCPCHHGGQ---------CDHV 284
Query: 89 TGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSC----DCDPV-GSLNRTCDP-ITG-Q 140
TGQC C +G C ++C G + + C C C P G+ C+P G
Sbjct: 285 TGQCHCTAGYMGDRCQEECPFGTFGFRCSQRC-DCHNGGQCSPATGACE--CEPGYKGPS 341
Query: 141 C---LCRPGVTGTRCELCQPNHYGFSLDGCKP----CMCDPIGSNSLQCDPSGQCP-GVF 192
C LC G+ G C P ++ C P C C P G + C+ S CP G +
Sbjct: 342 CQERLCPEGLHGPGCTSPCPCDTENTIS-CHPVTGACTCQP-GWSGHYCNES--CPAGYY 397
Query: 193 MNRAEM 198
N ++
Sbjct: 398 GNGCQL 403
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 48/182 (26%), Positives = 65/182 (35%)
Query: 29 GTTGD-C-LKCIYNTGGPQCDTCLPGYFGDALALPKGDC------EPCQCYIPGTLETET 80
G G+ C + C T GP C + G + G C + C +P + T
Sbjct: 425 GFMGEVCAVPCAAGTYGPNCSSVCSCSNGGTCSPVDGSCTCREGWQGLDCSLP--CPSGT 482
Query: 81 FTPVCDQ---LTGQCSCKPHVVGTNC------DQCEVGHYNIISGEGCKS-CDCDPVGSL 130
+ C++ +C P C D CE+ + G C CDC
Sbjct: 483 WGLNCNESCVCANGAACSPFDGSCACTPGWLGDSCELPCPDGTFGLNCSEHCDCSHADG- 541
Query: 131 NRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQCP 189
CDP+TG C C G TG RC+ C P +G P S S C+ G C
Sbjct: 542 ---CDPVTGHCCCLAGWTGIRCDSTCPPGRWG------------PNCSVSCSCENGGSCS 586
Query: 190 GV 191
V
Sbjct: 587 PV 588
>UNIPROTKB|F1NXF9 [details] [associations]
symbol:Gga.18391 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179
SMART:SM00181 InterPro:IPR000152 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 EMBL:AADN02021036 EMBL:AADN02021034
EMBL:AADN02021035 IPI:IPI00587188 ProteinModelPortal:F1NXF9
Ensembl:ENSGALT00000015394 OMA:YECACKE Uniprot:F1NXF9
Length = 1371
Score = 196 (74.1 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 57/151 (37%), Positives = 74/151 (49%)
Query: 49 CLPGYFGDALALP-KGD-----C-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
CLPG+ G+ P +GD C C C+ G L CD +TG C+C P G
Sbjct: 820 CLPGWRGETCEQPCQGDRFGQGCAHTCNCH-NGAL--------CDHITGTCACTPGWGGA 870
Query: 102 NCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPN 158
C + C G + G GC + C C P G CDP+TG+C C G TGT CEL C P
Sbjct: 871 TCQEACPPGWH----GAGCLQRCIC-P-GQT--ACDPVTGKCQCSKGGTGTSCELACPPG 922
Query: 159 HYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+G + C+ CD I +S+ C P +G C
Sbjct: 923 FFG---ERCEE-QCDCI--HSVSCHPQTGAC 947
Score = 181 (68.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 45/115 (39%), Positives = 62/115 (53%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCL 142
CD + GQC C G +C++ C G + GE C + CDC G+ CDP TG+CL
Sbjct: 1240 CDAVMGQCICPSGYHGIHCEKGCASGRF----GERCQRQCDCG--GA---PCDPATGKCL 1290
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC--PGVFM 193
C PG TG +C++ C+ + YG D C C S S QC+P +G+C P +M
Sbjct: 1291 CPPGKTGDKCDIGCRSDQYG--PDCSLRCQC---ASKS-QCNPYNGKCVCPATWM 1339
Score = 180 (68.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 55/165 (33%), Positives = 72/165 (43%)
Query: 33 DCL---KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPC--QCYIPGTLETETFTPVCDQ 87
DC+ C TG +C G D LP C +C+ P TP C
Sbjct: 933 DCIHSVSCHPQTGACRCAKGWRGRHCDKPCLPGHYGMGCARRCHCPAG------TP-CHH 985
Query: 88 LTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRP 145
LTG+CSC P G C++ C Y G+ C ++C C C PITG+C+CR
Sbjct: 986 LTGECSCPPGFTGHGCEKTCPPNTY----GQSCSQACRC----RAEEDCHPITGRCVCRL 1037
Query: 146 GVTGTRCEL-CQPNHYGFSLD-GCKPCM----CDPIGSNSLQCDP 184
G G +C+ C YG + CK CM CDP+ S + C P
Sbjct: 1038 GYHGAQCDRRCPEGTYGSNCQKSCK-CMNGGHCDPV-SGTCDCAP 1080
Score = 174 (66.3 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 41/123 (33%), Positives = 59/123 (47%)
Query: 70 CYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPV 127
C +P + ++ +C +TG+C+C P G +C C G + G+ C+ SC C+
Sbjct: 669 CQLPCSCSSDA---LCHHITGECTCPPGWTGHDCKHPCNSGRW----GQHCENSCACN-- 719
Query: 128 GSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-S 185
+ + +CDP+TG C C PG TG CE C +G S C C N CD S
Sbjct: 720 -NSDGSCDPVTGSCFCEPGFTGKHCEQRCPEGSFGPSC--MHSCQCQ----NGAACDHVS 772
Query: 186 GQC 188
G C
Sbjct: 773 GAC 775
Score = 171 (65.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 53/158 (33%), Positives = 63/158 (39%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSC 94
C TG C TC PG G P+G P C + + + +CD + G C+C
Sbjct: 1111 CDPRTGS--C-TCPPGQMGPGCQQVCPQGRFGP-SCRLTCSCQNGA---ICDHVDGSCTC 1163
Query: 95 KPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
G +C+ +C G Y G C C C N TCD TG CLC G G C
Sbjct: 1164 GLGWTGKSCEKECLPGKY----GPNCSLDCSCQH----NGTCDRFTGCCLCPAGFYGRSC 1215
Query: 153 EL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
E C P YG S C C N CD GQC
Sbjct: 1216 EHGCPPGFYGLSC--LHACAC----KNGASCDAVMGQC 1247
Score = 166 (63.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 54/167 (32%), Positives = 69/167 (41%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG +C +C PG+ G P C + C+C E + C +T
Sbjct: 983 CHHLTG--EC-SCPPGFTGHGCEKTCPPNTYGQSCSQACRC----RAEED-----CHPIT 1030
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C C+ G CD+ C G Y G C KSC C G CDP++G C C PG
Sbjct: 1031 GRCVCRLGYHGAQCDRRCPEGTY----GSNCQKSCKCMNGGH----CDPVSGTCDCAPGF 1082
Query: 148 TGTRC-ELCQPNHYGFSLD---GCKPCMCDPIGSNSLQCDPSGQCPG 190
G C + C N YG C CDP + S C P PG
Sbjct: 1083 IGADCSKTCPENRYGKDCALFCACGKGHCDP-RTGSCTCPPGQMGPG 1128
Score = 165 (63.1 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 54/167 (32%), Positives = 72/167 (43%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCE-PCQC-----YIPGTLETETFTPV 84
+ D L C + TG +C TC PG+ G DC+ PC + +
Sbjct: 676 SSDAL-CHHITG--EC-TCPPGWTGH-------DCKHPCNSGRWGQHCENSCACNNSDGS 724
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCL 142
CD +TG C C+P G +C+Q C G + G C SC C G+ CD ++G C
Sbjct: 725 CDPVTGSCFCEPGFTGKHCEQRCPEGSF----GPSCMHSCQCQN-GA---ACDHVSGACT 776
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
C G TGT C P + F LD + C C N+ CD G C
Sbjct: 777 CSAGWTGTFCRKACPEGF-FGLDCHQVCNC----KNAEGCDHVLGTC 818
Score = 159 (61.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 47/115 (40%), Positives = 53/115 (46%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
C+ C C P G C+Q C G Y G+GC S C C GS CDPITG C
Sbjct: 377 CNSENSGCVCSPGWTGIICNQTCAQGTY----GDGCASICMCQNGGS----CDPITGLCH 428
Query: 143 CRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPS-GQC---PGVF 192
C PGV G CE P GF C KPC C +NS C G C PG++
Sbjct: 429 CPPGVQGPFCEDGCPR--GFFGKNCNKPCNC----ANSGHCHRLYGACLCDPGLY 477
Score = 153 (58.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 58/180 (32%), Positives = 72/180 (40%)
Query: 29 GTTGD-CLK-CIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIP 73
GT GD C C+ GG CD C PG G P+G +C +PC C
Sbjct: 402 GTYGDGCASICMCQNGG-SCDPITGLCHCPPGVQGPFCEDGCPRGFFGKNCNKPCNCANS 460
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLN 131
G C +L G C C P + G C C + G GC + C C +L
Sbjct: 461 GH---------CHRLYGACLCDPGLYGRFCHLTCPRWAF----GVGCSQECQCVKEHTLG 507
Query: 132 RTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCK-PCMCDPIGSNSLQCD-PSGQC 188
C G C C+PG G +C+ C P YG GCK C C S + CD +G C
Sbjct: 508 --CSARNGTCSCKPGYHGKKCQKACTPGFYGA---GCKLRCNC----STDVLCDHETGAC 558
Score = 151 (58.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/170 (32%), Positives = 73/170 (42%)
Query: 33 DCL---KCIYNTGGPQCDTCLPGYFG----DALALPK-GD-CEP-CQCYIPGTLETETFT 82
DC+ +C N+ C C PG+ G A GD C C C G+
Sbjct: 370 DCMNGGRC--NSENSGC-VCSPGWTGIICNQTCAQGTYGDGCASICMCQNGGS------- 419
Query: 83 PVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQ 140
CD +TG C C P V G C D C G + G+ C K C+C G C + G
Sbjct: 420 --CDPITGLCHCPPGVQGPFCEDGCPRGFF----GKNCNKPCNCANSGH----CHRLYGA 469
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
CLC PG+ G C L P + F + GC + C C + ++L C +G C
Sbjct: 470 CLCDPGLYGRFCHLTCPR-WAFGV-GCSQECQC--VKEHTLGCSARNGTC 515
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/147 (31%), Positives = 65/147 (44%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPG-TLETET-FTPVCDQLTGQCSCKPHVVGTNCDQ 105
TC G+ G + + +C P + Y P +L+ CD+ TG C C G +C+
Sbjct: 1162 TCGLGWTGKSC---EKECLPGK-YGPNCSLDCSCQHNGTCDRFTGCCLCPAGFYGRSCEH 1217
Query: 106 -CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGF 162
C G Y G C +C C S CD + GQC+C G G CE C +G
Sbjct: 1218 GCPPGFY----GLSCLHACACKNGAS----CDAVMGQCICPSGYHGIHCEKGCASGRFG- 1268
Query: 163 SLDGCKPCMCDPIGSNSLQCDPS-GQC 188
+ C+ CD G+ CDP+ G+C
Sbjct: 1269 --ERCQR-QCDCGGA---PCDPATGKC 1289
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/165 (29%), Positives = 61/165 (36%)
Query: 37 CIYNTGGPQCDT------CLPGYFGDALA--LPKGDCEPCQCYIPGTLETETFTPVCDQL 88
C N CD C PG+ G P+G P C + CD +
Sbjct: 716 CACNNSDGSCDPVTGSCFCEPGFTGKHCEQRCPEGSFGP-SCMHSCQCQNGA---ACDHV 771
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
+G C+C GT C + C G + G C C+C CD + G C C PG
Sbjct: 772 SGACTCSAGWTGTFCRKACPEGFF----GLDCHQVCNCKNAEG----CDHVLGTCRCLPG 823
Query: 147 VTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
G CE CQ + +G GC C C N CD +G C
Sbjct: 824 WRGETCEQPCQGDRFG---QGCAHTCNCH----NGALCDHITGTC 861
Score = 132 (51.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 46/125 (36%), Positives = 52/125 (41%)
Query: 35 LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGT-LETETFTPV-CDQLTGQC 92
L C G C +C PGY G K C P Y G L T V CD TG C
Sbjct: 506 LGCSARNG--TC-SCKPGYHGKKCQ--KA-CTP-GFYGAGCKLRCNCSTDVLCDHETGAC 558
Query: 93 S--CKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C P G C C+ G + G C+ SC C G+ CDP TG+C C G T
Sbjct: 559 KRPCPPGFHGEKCHSSCQPGSF----GVDCRQSCSCG--GA---PCDPETGRCFCPAGKT 609
Query: 149 GTRCE 153
G CE
Sbjct: 610 GAMCE 614
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 51/183 (27%), Positives = 71/183 (38%)
Query: 31 TGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG C +C G C+ C PG+FG+ E C C + C T
Sbjct: 901 TGKC-QCSKGGTGTSCELACPPGFFGERCE------EQCDCI---------HSVSCHPQT 944
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNR--TCDP-ITGQ-C--L 142
G C C G +CD+ C GHY + C P L +C P TG C
Sbjct: 945 GACRCAKGWRGRHCDKPCLPGHYGMGCARRCHCPAGTPCHHLTGECSCPPGFTGHGCEKT 1004
Query: 143 CRPGVTGTRC-ELCQPNHYGFSLDGCKP----CMCDPIGSNSLQCDPSGQCP-GVFMNRA 196
C P G C + C+ + + C P C+C +G + QCD +CP G + +
Sbjct: 1005 CPPNTYGQSCSQACRCR----AEEDCHPITGRCVCR-LGYHGAQCDR--RCPEGTYGSNC 1057
Query: 197 EMS 199
+ S
Sbjct: 1058 QKS 1060
>UNIPROTKB|Q9Y2I2 [details] [associations]
symbol:NTNG1 "Netrin-G1" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0046658 "anchored to plasma
membrane" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 Orphanet:3095 PDB:3ZYJ
PDBsum:3ZYJ EMBL:AB023193 EMBL:AY358365 EMBL:BX538348 EMBL:AL590427
EMBL:AL513187 EMBL:AC114491 EMBL:BC030220 IPI:IPI00412988
IPI:IPI00412989 IPI:IPI00477903 IPI:IPI00478407 IPI:IPI00478746
IPI:IPI00479203 RefSeq:NP_001106697.1 RefSeq:NP_001106699.1
RefSeq:NP_055732.2 UniGene:Hs.732535 ProteinModelPortal:Q9Y2I2
SMR:Q9Y2I2 STRING:Q9Y2I2 PhosphoSite:Q9Y2I2 DMDM:57015420
PRIDE:Q9Y2I2 DNASU:22854 Ensembl:ENST00000294649
Ensembl:ENST00000370065 Ensembl:ENST00000370066
Ensembl:ENST00000370067 Ensembl:ENST00000370068
Ensembl:ENST00000370071 Ensembl:ENST00000370073
Ensembl:ENST00000370074 Ensembl:ENST00000370076 GeneID:22854
KEGG:hsa:22854 UCSC:uc001dvc.4 UCSC:uc001dvd.1 UCSC:uc001dvf.4
UCSC:uc001dvh.4 CTD:22854 GeneCards:GC01P107682 HGNC:HGNC:23319
MIM:608818 neXtProt:NX_Q9Y2I2 PharmGKB:PA164742200 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 OMA:YCECFGH ChiTaRS:NTNG1
GenomeRNAi:22854 NextBio:43337 ArrayExpress:Q9Y2I2 Bgee:Q9Y2I2
CleanEx:HS_NTNG1 Genevestigator:Q9Y2I2 GermOnline:ENSG00000162631
Uniprot:Q9Y2I2
Length = 539
Score = 190 (71.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 56/173 (32%), Positives = 81/173 (46%)
Query: 30 TTG-DCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETF--TPVCD 86
TTG DC KC N G PG + L +PKG C I E F + C
Sbjct: 321 TTGPDCGKCKKNYQGRPWS---PGSY---LPIPKGTANTCIPSISSIGNCECFGHSNRCS 374
Query: 87 QL----TGQC-SCKPHVVGTNCDQCEVGHYNIISGE-----GCKSCDCDPVGSLNRTCDP 136
+ T C SCK + G +C+ C +G++ S + C C C+P+GS++ C+
Sbjct: 375 YIDLLNTVICVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNG 434
Query: 137 ITGQCLCRPGVTGTRCELCQP-NHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
+G C C+ G TG +C+ C P N + + GC+P +CD + L C G C
Sbjct: 435 -SGFCECKTGTTGPKCDECLPGNSWHY---GCQPNVCD---NELLHCQNGGTC 480
Score = 143 (55.4 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 42/128 (32%), Positives = 56/128 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C+ C GYF +A A + C C C G++ C+ +G
Sbjct: 384 CVSCKHNTRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDR-----CNG-SGF 437
Query: 92 CSCKPHVVGTNCDQCEVG---HYNIISGEGCKS--CDCDPVGSLNR-TCDPITGQCLCRP 145
C CK G CD+C G HY GC+ CD + + N TC +CLC
Sbjct: 438 CECKTGTTGPKCDECLPGNSWHY------GCQPNVCDNELLHCQNGGTCHNNV-RCLCPA 490
Query: 146 GVTGTRCE 153
TG CE
Sbjct: 491 AYTGILCE 498
>RGD|1307089 [details] [associations]
symbol:Ntng2 "netrin G2" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 RGD:1307089 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 EMBL:CH474001
GeneTree:ENSGT00700000104042 CTD:84628 KO:K16359 IPI:IPI00561682
RefSeq:NP_001101295.1 UniGene:Rn.218540 Ensembl:ENSRNOT00000045919
GeneID:311836 KEGG:rno:311836 UCSC:RGD:1307089 NextBio:664255
Uniprot:D4A9F4
Length = 564
Score = 190 (71.9 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 60 LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE- 117
+P + + C+CY G ++ + +T C SCK + G +C C +G+Y S E
Sbjct: 380 IPIEEFQDCECY--GHSNRCSYIDFLNVVT--CVSCKHNTRGQHCQHCRLGYYRNGSAEL 435
Query: 118 ----GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCD 173
C C+C+ +GS++ C+ TG C CR G G +C+ C P HY GC P +CD
Sbjct: 436 DDENVCIECNCNQIGSVHDRCNE-TGFCECREGAVGPKCDDCLPTHYW--RQGCYPNVCD 492
Query: 174 PIGSNSLQCDPSGQC 188
+ L C G C
Sbjct: 493 ---DDQLLCQNGGTC 504
Score = 168 (64.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/129 (34%), Positives = 57/129 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYF--GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C C GY+ G A + C C C G++ C++ TG
Sbjct: 408 CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDR-----CNE-TGF 461
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGC--KSCDCDPVGSLNR-TCDPITGQCLCRPGVT 148
C C+ VG CD C HY +GC CD D + N TC +C C PG
Sbjct: 462 CECREGAVGPKCDDCLPTHY---WRQGCYPNVCDDDQLLCQNGGTCQQ-NQRCACPPGYA 517
Query: 149 GTRCELCQP 157
G RCE QP
Sbjct: 518 GIRCE--QP 524
>MGI|MGI:2159341 [details] [associations]
symbol:Ntng2 "netrin G2" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 MGI:MGI:2159341 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 EMBL:CH466542
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
eggNOG:NOG286598 HOVERGEN:HBG052676 CTD:84628 HOGENOM:HOG000231614
KO:K16359 OrthoDB:EOG47D9FR EMBL:AB052336 EMBL:AB052337
EMBL:AB052338 EMBL:AF475079 EMBL:AF475080 EMBL:AL772379
IPI:IPI00311068 IPI:IPI00311069 IPI:IPI00625609 RefSeq:NP_598007.1
RefSeq:NP_598008.1 UniGene:Mm.442448 ProteinModelPortal:Q8R4F1
SMR:Q8R4F1 STRING:Q8R4F1 PRIDE:Q8R4F1 Ensembl:ENSMUST00000048455
Ensembl:ENSMUST00000091153 Ensembl:ENSMUST00000102873 GeneID:171171
KEGG:mmu:171171 InParanoid:A2AKX0 OMA:QPRCDPA ChiTaRS:NTNG2
NextBio:370580 Bgee:Q8R4F1 CleanEx:MM_NTNG2 Genevestigator:Q8R4F1
GermOnline:ENSMUSG00000035513 Uniprot:Q8R4F1
Length = 589
Score = 190 (71.9 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 60 LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQCEVGHYNIISGE- 117
+P + + C+CY G ++ + +T C SCK + G +C C +G+Y S E
Sbjct: 405 IPIEEFQDCECY--GHSNRCSYIDFLNVVT--CVSCKHNTRGQHCQHCRLGYYRNGSAEL 460
Query: 118 ----GCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCD 173
C C+C+ +GS++ C+ TG C CR G G +C+ C P HY GC P +CD
Sbjct: 461 DDENVCIECNCNQIGSVHDRCNE-TGFCECREGAVGPKCDDCLPTHYW--RQGCYPNVCD 517
Query: 174 PIGSNSLQCDPSGQC 188
+ L C G C
Sbjct: 518 ---DDQLLCQNGGTC 529
Score = 173 (66.0 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 46/129 (35%), Positives = 58/129 (44%)
Query: 34 CLKCIYNTGGPQCDTCLPGYF--GDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
C+ C +NT G C C GY+ G A + C C C G++ C++ TG
Sbjct: 433 CVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDR-----CNE-TGF 486
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGC--KSCDCDPVGSLNR-TCDPITGQCLCRPGVT 148
C C+ VG CD C HY +GC CD D + N TC +C C PG T
Sbjct: 487 CECREGAVGPKCDDCLPTHY---WRQGCYPNVCDDDQLLCQNGGTCQQ-NQRCACPPGYT 542
Query: 149 GTRCELCQP 157
G RCE QP
Sbjct: 543 GIRCE--QP 549
>UNIPROTKB|A6BM72 [details] [associations]
symbol:MEGF11 "Multiple epidermal growth factor-like
domains protein 11" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0034109 "homotypic cell-cell adhesion"
evidence=ISS] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0016323
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0010842
GO:GO:0034109 HOGENOM:HOG000294130 Pfam:PF12661 HOVERGEN:HBG108333
OrthoDB:EOG42JNQJ EMBL:AB058677 EMBL:AB300051 EMBL:AY358226
EMBL:AC011847 EMBL:AC084854 EMBL:AC087382 EMBL:BC117419
EMBL:BC126313 EMBL:AL834326 IPI:IPI00064606 IPI:IPI00432703
IPI:IPI00796004 IPI:IPI00872029 RefSeq:NP_115821.2
UniGene:Hs.712886 ProteinModelPortal:A6BM72 SMR:A6BM72
IntAct:A6BM72 MINT:MINT-2877220 STRING:A6BM72 PhosphoSite:A6BM72
PRIDE:A6BM72 Ensembl:ENST00000288745 Ensembl:ENST00000360698
Ensembl:ENST00000395614 Ensembl:ENST00000395625
Ensembl:ENST00000409699 Ensembl:ENST00000422354 GeneID:84465
KEGG:hsa:84465 UCSC:uc002apl.2 UCSC:uc002apm.2 CTD:84465
GeneCards:GC15M066187 H-InvDB:HIX0018384 HGNC:HGNC:29635
HPA:HPA017982 MIM:612454 neXtProt:NX_A6BM72 PharmGKB:PA144596411
InParanoid:A6BM72 OMA:ECMNNST ChiTaRS:MEGF11 GenomeRNAi:84465
NextBio:74270 ArrayExpress:A6BM72 Bgee:A6BM72 CleanEx:HS_MEGF11
Genevestigator:A6BM72 Uniprot:A6BM72
Length = 1044
Score = 193 (73.0 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 65/189 (34%), Positives = 82/189 (43%)
Query: 29 GTTG-DCLK-CIYNTGGPQCDT------CLPGYFGDALA--LPKGD----C-EPCQCYIP 73
GT G +C + C + GG QCD C GY GD P G C + C C+
Sbjct: 265 GTFGQNCSQDCPCHHGG-QCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNG 323
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ--CEVGHYNIISGEGCK-SCDCDPVGSL 130
G C TG C C+P G C + C G + G GC C CD ++
Sbjct: 324 GQ---------CSPTTGACECEPGYKGPRCQERLCPEG----LHGPGCTLPCPCDADNTI 370
Query: 131 NRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQ 187
+ C P+TG C C+PG +G C E C +YG DGC+ PC C N C +G
Sbjct: 371 S--CHPVTGACTCQPGWSGHHCNESCPVGYYG---DGCQLPCTCQ----NGADCHSITGG 421
Query: 188 C---PGVFM 193
C PG FM
Sbjct: 422 CTCAPG-FM 429
Score = 179 (68.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 64/182 (35%), Positives = 78/182 (42%)
Query: 28 AGTTG-DCLK-CIYNTGG---P---QCDTCLPGYFG-DA-LALPKG----DC-EPCQCYI 72
AGT G +C C N GG P C TC G+ G D L P G +C E C C
Sbjct: 439 AGTYGPNCSSICSCNNGGTCSPVDGSC-TCKEGWQGLDCTLPCPSGTWGLNCNESCTC-A 496
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLN 131
G C + G CSC P +G C+ C G + + E CDC
Sbjct: 497 NGA--------ACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSE---HCDCSHADG-- 543
Query: 132 RTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQC- 188
CDP+TG C C G TG RC+ C P +G C C C+ GS S + D S +C
Sbjct: 544 --CDPVTGHCCCLAGWTGIRCDSTCPPGRWG---PNCSVSCSCENGGSCSPE-DGSCECA 597
Query: 189 PG 190
PG
Sbjct: 598 PG 599
Score = 174 (66.3 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 53/161 (32%), Positives = 73/161 (45%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALA---LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
+C TG +C+ PGY G P+G P C +P + + T C +TG C
Sbjct: 325 QCSPTTGACECE---PGYKGPRCQERLCPEGLHGP-GCTLPCPCDADN-TISCHPVTGAC 379
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C+P G +C++ C VG+Y G+GC+ C C G+ C ITG C C PG G
Sbjct: 380 TCQPGWSGHHCNESCPVGYY----GDGCQLPCTCQN-GA---DCHSITGGCTCAPGFMGE 431
Query: 151 RCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C + C YG C C C+ G+ C P G C
Sbjct: 432 VCAVSCAAGTYG---PNCSSICSCNNGGT----CSPVDGSC 465
Score = 173 (66.0 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 54/164 (32%), Positives = 67/164 (40%)
Query: 28 AGTTG-DCLKCIYNTGGPQCD------TCLPGYFGDALALPKGD------C-EPCQCYIP 73
+GT G +C + G C +C PG+ GD LP D C E C C
Sbjct: 482 SGTWGLNCNESCTCANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDC--- 538
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLN 131
+ CD +TG C C G CD C G + G C SC C+ GS
Sbjct: 539 ------SHADGCDPVTGHCCCLAGWTGIRCDSTCPPGRW----GPNCSVSCSCENGGS-- 586
Query: 132 RTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGC-KPC-MC 172
C P G C C PG G C+ +C P YG GC +PC +C
Sbjct: 587 --CSPEDGSCECAPGFRGPLCQRICPPGFYGH---GCAQPCPLC 625
Score = 166 (63.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 48/134 (35%), Positives = 66/134 (49%)
Query: 69 QCYIPGTLETETFT-PVCDQ--LTGQC------SCKPHVVGTNCDQ-CEVGHYNIISGEG 118
QC PG E+ F P+C + + G+C C+P G +C C+ H+ G
Sbjct: 87 QC-CPGYYESGDFCIPLCTEECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHW----GPH 141
Query: 119 CKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCK-PCMCDPI 175
C + C C G+L C+PITG C+C G G RCE LC P +G GC+ PC C
Sbjct: 142 CSNRCQCQN-GAL---CNPITGACVCAAGFRGWRCEELCAPGTHG---KGCQLPCQC--- 191
Query: 176 GSNSLQCDP-SGQC 188
+ CDP +G+C
Sbjct: 192 -RHGASCDPRAGEC 204
Score = 159 (61.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 53/158 (33%), Positives = 67/158 (42%)
Query: 41 TGGPQCDTCLPGYFGDALALP----KGDCE-PCQCYIPGTLETETFTPVCDQLTGQCSCK 95
TG C G+ + L P KG C+ PCQC + CD G+C C
Sbjct: 158 TGACVCAAGFRGWRCEELCAPGTHGKG-CQLPCQCRHGAS---------CDPRAGECLCA 207
Query: 96 PHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC- 152
P G C++ C G + G C+ C C G TC ITG+C C PG TG C
Sbjct: 208 PGYTGVYCEELCPPGSH----GAHCELRCPCQNGG----TCHHITGECACPPGWTGAVCA 259
Query: 153 ELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+ C P +G C + C C G QCD +GQC
Sbjct: 260 QPCPPGTFG---QNCSQDCPCHHGG----QCDHVTGQC 290
Score = 157 (60.3 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 62/200 (31%), Positives = 83/200 (41%)
Query: 6 HHVSVMDILLCV-GPPSDILKSVA--GTTG-DCLK---CIYN-TGGP---QCDTCLPGYF 54
HH+S I C+ G + V G G DC + C N T P C C PG+
Sbjct: 633 HHIS--GICECLPGFSGALCNQVCAGGYFGQDCAQLCSCANNGTCSPIDGSCQ-CFPGWI 689
Query: 55 GD--ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHY 111
G + A P G P C+ + C G C C P G C Q C +
Sbjct: 690 GKDCSQACPPGFWGPA-CFHACSCHNGAS---CSAEDGACHCTPGWTGLFCTQRCPAAFF 745
Query: 112 NIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP 169
G+ C + C C S CD I+G+C CR G TG CE C P +G+ GC+
Sbjct: 746 ----GKDCGRVCQCQNGAS----CDHISGKCTCRTGFTGQHCEQRCAPGTFGY---GCQQ 794
Query: 170 CMCDPIGSNSLQCDP-SGQC 188
+C+ + N+ CD +G C
Sbjct: 795 -LCECM--NNSTCDHVTGTC 811
Score = 152 (58.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/90 (37%), Positives = 45/90 (50%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQC 141
+C+ +TG C C G C++ C G + G+GC+ C C S CDP G+C
Sbjct: 153 LCNPITGACVCAAGFRGWRCEELCAPGTH----GKGCQLPCQCRHGAS----CDPRAGEC 204
Query: 142 LCRPGVTGTRCE-LCQPNHYGFSLDGCKPC 170
LC PG TG CE LC P +G + PC
Sbjct: 205 LCAPGYTGVYCEELCPPGSHGAHCELRCPC 234
Score = 149 (57.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD ++G+C+C+ G +C+Q C G + G GC+ C+C N TCD +TG C
Sbjct: 761 CDHISGKCTCRTGFTGQHCEQRCAPGTF----GYGCQQLCEC----MNNSTCDHVTGTCY 812
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 813 CSPGFKGIRCD 823
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 47/148 (31%), Positives = 61/148 (41%)
Query: 49 CLPGYFG---DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ 105
CL G+ G D+ P G P C + + E C G C C P G C +
Sbjct: 553 CLAGWTGIRCDSTC-PPGRWGP-NCSVSCSCENGGS---CSPEDGSCECAPGFRGPLCQR 607
Query: 106 -CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGFS 163
C G Y G GC C +R C I+G C C PG +G C ++C ++G
Sbjct: 608 ICPPGFY----GHGCAQ-PCPLCVHSSRPCHHISGICECLPGFSGALCNQVCAGGYFG-- 660
Query: 164 LDGCKPCMCDPIGSNSLQCDPSGQC-PG 190
D + C C G+ S D S QC PG
Sbjct: 661 QDCAQLCSCANNGTCS-PIDGSCQCFPG 687
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/176 (29%), Positives = 70/176 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQL 88
TG+C C G C C PG FG +C + C C+ G CD +
Sbjct: 244 TGECA-CPPGWTGAVCAQPCPPGTFGQ-------NCSQDCPCHHGGQ---------CDHV 286
Query: 89 TGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSC----DCDPV-GSLNRTCDP-ITG-Q 140
TGQC C +G C ++C G + + C C C P G+ C+P G +
Sbjct: 287 TGQCHCTAGYMGDRCQEECPFGSFGFQCSQHC-DCHNGGQCSPTTGACE--CEPGYKGPR 343
Query: 141 C---LCRPGVTGTRCELCQPNHYGFSLDGCKP----CMCDPIGSNSLQCDPSGQCP 189
C LC G+ G C L P ++ C P C C P G + C+ S CP
Sbjct: 344 CQERLCPEGLHGPGCTLPCPCDADNTIS-CHPVTGACTCQP-GWSGHHCNES--CP 395
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 197 (74.4 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 55/155 (35%), Positives = 76/155 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTG 90
G CL C +NT G QC+ C PG+ GDA DC+P P +P CD G
Sbjct: 969 GYCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAP--CHCNNHSPRGCDSF-G 1025
Query: 91 QCS-CKPHVVGTNCDQCEVGHY-NIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR-- 144
+C C+ + GT+C++C+ G+Y + G C C C P G+ + D GQ CR
Sbjct: 1026 RCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC-P-GASDCYLDN-EGQVACRIC 1082
Query: 145 P-GVTGTRCELCQPNHYGFSLDGCKPC--MCDPIG 176
P G+ G C C P G++ KP +C+PIG
Sbjct: 1083 PAGLQGRLCNECAP---GYTRSN-KPAGRVCEPIG 1113
Score = 175 (66.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 57/188 (30%), Positives = 76/188 (40%)
Query: 30 TTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
T + +CI G G C+ C PGY L G CE C+C CD+
Sbjct: 915 TAAEVEQCICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCEC--------NGHASQCDK 966
Query: 88 LTGQC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGS-----LN----RTCDPI 137
G C C+ + G C++C+ G + G + DC P + N R CD
Sbjct: 967 EYGYCLDCQHNTEGDQCERCKPGFVGD-ARRGTPN-DCQPEATRAPCHCNNHSPRGCDSF 1024
Query: 138 TGQCL-CRPGVTGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPSGQ----- 187
G+CL C GT CE C+ +YG + G C PC C P G++ D GQ
Sbjct: 1025 -GRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC-P-GASDCYLDNEGQVACRI 1081
Query: 188 CPGVFMNR 195
CP R
Sbjct: 1082 CPAGLQGR 1089
Score = 154 (59.3 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 35/106 (33%), Positives = 48/106 (45%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP--------ITGQCL 142
QC C P +GT+C+ C G+ SG G C P+ ++ C P GQC
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYER--SGYGPYLGTCVPIQPRHQQCGPGAVAPTAPAQGQCQ 690
Query: 143 CRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQCDPS 185
C+ V G C+ C PN +G + GC PC C + + QC S
Sbjct: 691 CKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCSGV---TQQCSAS 733
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G CL C +NT G C+ C GY+GDA DC PC C PG + D GQ
Sbjct: 1025 GRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC--PGASDC-----YLDN-EGQ 1076
Query: 92 CSCK--PH-VVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
+C+ P + G C++C G+ G C+P+G + T + IT
Sbjct: 1077 VACRICPAGLQGRLCNECAPGYTRSNKPAGRV---CEPIGQV--TNEDIT 1121
Score = 120 (47.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 32/101 (31%), Positives = 42/101 (41%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQ-----CYIPGTLETETFTPVCDQL 88
+C+ G G C+ C PGY G C P Q C PG + P
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYERSGYGPYLGTCVPIQPRHQQCG-PGAV-----APTAPA- 685
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPV 127
GQC CK V+G NCD+C + + + +GC C C V
Sbjct: 686 QGQCQCKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCSGV 726
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDC 124
G C CK V G NCDQC+ G +++ S EGC C C
Sbjct: 398 GTCECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
Score = 96 (38.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM--CDPIGSNSLQCDPSGQCP 189
QC+C PG GT CE C P G+ G P + C PI QC P P
Sbjct: 633 QCVCPPGYLGTSCEDCAP---GYERSGYGPYLGTCVPIQPRHQQCGPGAVAP 681
Score = 76 (31.8 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
G C +C GP CD C PG F + P+G C C C+
Sbjct: 398 GTC-ECKSQVTGPNCDQCKPGAFHLSEKSPEG-CLKCFCF 435
Score = 45 (20.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 153 ELCQPNHYGFSLDGCKPCMCDP--IGSNSLQCDP 184
E +P G + + C+C P +G++ C P
Sbjct: 905 EFAEPYGQGLTAAEVEQCICPPGYVGTSCEDCAP 938
Score = 42 (19.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 119 CKSCDCDPVGSLNRTCDP--ITGQ-CLCRPGVTGTRCELCQPNHYGFSLDG 166
C + C +N C P +T C C+ G C L +P + DG
Sbjct: 3141 CANSTC----GMNGQCVPRNMTHYTCECKLYYDGPTCSLFKPIEHAARFDG 3187
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 197 (74.4 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 55/155 (35%), Positives = 76/155 (49%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTG 90
G CL C +NT G QC+ C PG+ GDA DC+P P +P CD G
Sbjct: 969 GYCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAP--CHCNNHSPRGCDSF-G 1025
Query: 91 QCS-CKPHVVGTNCDQCEVGHY-NIISGE--GCKSCDCDPVGSLNRTCDPITGQCLCR-- 144
+C C+ + GT+C++C+ G+Y + G C C C P G+ + D GQ CR
Sbjct: 1026 RCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC-P-GASDCYLDN-EGQVACRIC 1082
Query: 145 P-GVTGTRCELCQPNHYGFSLDGCKPC--MCDPIG 176
P G+ G C C P G++ KP +C+PIG
Sbjct: 1083 PAGLQGRLCNECAP---GYTRSN-KPAGRVCEPIG 1113
Score = 175 (66.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 57/188 (30%), Positives = 76/188 (40%)
Query: 30 TTGDCLKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
T + +CI G G C+ C PGY L G CE C+C CD+
Sbjct: 915 TAAEVEQCICPPGYVGTSCEDCAPGYSRTGGGLYLGLCEKCEC--------NGHASQCDK 966
Query: 88 LTGQC-SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGS-----LN----RTCDPI 137
G C C+ + G C++C+ G + G + DC P + N R CD
Sbjct: 967 EYGYCLDCQHNTEGDQCERCKPGFVGD-ARRGTPN-DCQPEATRAPCHCNNHSPRGCDSF 1024
Query: 138 TGQCL-CRPGVTGTRCELCQPNHYGFSLDG----CKPCMCDPIGSNSLQCDPSGQ----- 187
G+CL C GT CE C+ +YG + G C PC C P G++ D GQ
Sbjct: 1025 -GRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC-P-GASDCYLDNEGQVACRI 1081
Query: 188 CPGVFMNR 195
CP R
Sbjct: 1082 CPAGLQGR 1089
Score = 154 (59.3 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 35/106 (33%), Positives = 48/106 (45%)
Query: 91 QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDP--------ITGQCL 142
QC C P +GT+C+ C G+ SG G C P+ ++ C P GQC
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYER--SGYGPYLGTCVPIQPRHQQCGPGAVAPTAPAQGQCQ 690
Query: 143 CRPGVTGTRCELCQPNHYGFSL---DGCKPCMCDPIGSNSLQCDPS 185
C+ V G C+ C PN +G + GC PC C + + QC S
Sbjct: 691 CKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCSGV---TQQCSAS 733
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G CL C +NT G C+ C GY+GDA DC PC C PG + D GQ
Sbjct: 1025 GRCLLCEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPC--PGASDC-----YLDN-EGQ 1076
Query: 92 CSCK--PH-VVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPIT 138
+C+ P + G C++C G+ G C+P+G + T + IT
Sbjct: 1077 VACRICPAGLQGRLCNECAPGYTRSNKPAGRV---CEPIGQV--TNEDIT 1121
Score = 120 (47.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 32/101 (31%), Positives = 42/101 (41%)
Query: 36 KCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQ-----CYIPGTLETETFTPVCDQL 88
+C+ G G C+ C PGY G C P Q C PG + P
Sbjct: 633 QCVCPPGYLGTSCEDCAPGYERSGYGPYLGTCVPIQPRHQQCG-PGAV-----APTAPA- 685
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDCDPV 127
GQC CK V+G NCD+C + + + +GC C C V
Sbjct: 686 QGQCQCKASVIGPNCDRCAPNSFGLAPTNPQGCIPCFCSGV 726
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 90 GQCSCKPHVVGTNCDQCEVGHYNII--SGEGCKSCDC 124
G C CK V G NCDQC+ G +++ S EGC C C
Sbjct: 398 GTCECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
Score = 96 (38.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGCKPCM--CDPIGSNSLQCDPSGQCP 189
QC+C PG GT CE C P G+ G P + C PI QC P P
Sbjct: 633 QCVCPPGYLGTSCEDCAP---GYERSGYGPYLGTCVPIQPRHQQCGPGAVAP 681
Score = 76 (31.8 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY 71
G C +C GP CD C PG F + P+G C C C+
Sbjct: 398 GTC-ECKSQVTGPNCDQCKPGAFHLSEKSPEG-CLKCFCF 435
Score = 45 (20.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 153 ELCQPNHYGFSLDGCKPCMCDP--IGSNSLQCDP 184
E +P G + + C+C P +G++ C P
Sbjct: 905 EFAEPYGQGLTAAEVEQCICPPGYVGTSCEDCAP 938
Score = 42 (19.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 119 CKSCDCDPVGSLNRTCDP--ITGQ-CLCRPGVTGTRCELCQPNHYGFSLDG 166
C + C +N C P +T C C+ G C L +P + DG
Sbjct: 3141 CANSTC----GMNGQCVPRNMTHYTCECKLYYDGPTCSLFKPIEHAARFDG 3187
>MGI|MGI:1919351 [details] [associations]
symbol:Megf6 "multiple EGF-like-domains 6" species:10090
"Mus musculus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR011489 InterPro:IPR018097
Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1919351
GO:GO:0005576 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 EMBL:AL627123 InterPro:IPR013111
Pfam:PF07974 InterPro:IPR026823 Pfam:PF12662
GeneTree:ENSGT00690000101691 CTD:1953 HOGENOM:HOG000097840
HOVERGEN:HBG079790 EMBL:BC031402 EMBL:BC039980 EMBL:BC058571
IPI:IPI00676714 RefSeq:NP_001156449.1 UniGene:Mm.275216
ProteinModelPortal:Q80V70 SMR:Q80V70 STRING:Q80V70
PhosphoSite:Q80V70 PRIDE:Q80V70 Ensembl:ENSMUST00000030897
GeneID:230971 KEGG:mmu:230971 UCSC:uc008wbp.2 InParanoid:Q80V70
OrthoDB:EOG4CZBF1 ChiTaRS:MEGF6 NextBio:380326 Bgee:Q80V70
CleanEx:MM_MEGF6 Genevestigator:Q80V70
GermOnline:ENSMUSG00000057751 Uniprot:Q80V70
Length = 1572
Score = 194 (73.4 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 64/175 (36%), Positives = 83/175 (47%)
Query: 28 AGTTGD-CL-KC-IYNTGG--PQCDTCL--PGYFGDAL--ALPKG-DCEPCQCYIPGTLE 77
AG G CL +C N G P CL PG++G A P G CQ E
Sbjct: 1382 AGRYGAACLLECSCQNNGSCEPTSGACLCGPGFYGQACEDTCPAGFHGSGCQ----RVCE 1437
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCD 135
+ P CD ++G+C C G C++ C+ G + G+GC + C+ P G CD
Sbjct: 1438 CQQGAP-CDPVSGRCLCPAGFRGQFCERGCKPGFF----GDGCLQQCN-SPTGV---PCD 1488
Query: 136 PITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
PI+G CLC PG GT C+L C+ +G GC CD G + CDP SGQC
Sbjct: 1489 PISGLCLCPPGRAGTTCDLDCRRGRFG---PGCA-LRCD-CGGGA-DCDPISGQC 1537
Score = 177 (67.4 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 63/175 (36%), Positives = 74/175 (42%)
Query: 28 AGTTG-DC-LKCIYNTGGPQCDT------CLPGYFGDALALPKGDCEPCQCYIPGTLETE 79
AG G DC C + G P CD C G +G A C P + +
Sbjct: 951 AGFFGLDCGSACNCSAGAP-CDAVTGSCICPAGRWGPHCAQT---CPPLTFGLNCSQICT 1006
Query: 80 TFTPV-CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDP 136
F CD + GQC C P +G C Q C G Y G+ C+ SC C GS CDP
Sbjct: 1007 CFNGASCDPVLGQCHCAPGWMGPTCLQACPAGLY----GKNCQHSCLCRNGGS----CDP 1058
Query: 137 ITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
I GQC C G TG CE C P H+G GC+ C C N CD +G C
Sbjct: 1059 ILGQCTCPEGWTGLACENECLPGHHGA---GCRLNCSC----LNGGTCDRLTGHC 1106
Score = 173 (66.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 55/170 (32%), Positives = 74/170 (43%)
Query: 34 CLKCIYNTG-GPQCDTCL--PGYFGDAL--ALPKG----DCEP-CQCYIPGTLETETFTP 83
C C + P+ TCL PG+ G A P G C+ C C G
Sbjct: 788 CPACEHGASCDPETGTCLCLPGFVGSRCQDACPAGWFGTGCQMRCACANDGH-------- 839
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC 141
C TG+CSC P G +C + C+ GH+ G C C+C G N CD ++G C
Sbjct: 840 -CHPATGRCSCAPGWTGLSCQRACDSGHW----GPDCIHPCNCS-AGHGN--CDAVSGLC 891
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
LC G G +CE C+ ++G GC+ C C+ + CD SG C
Sbjct: 892 LCEAGYEGPQCEQWCRQGYFG---PGCEQKCRCE----HGATCDHVSGAC 934
Score = 169 (64.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 50/153 (32%), Positives = 73/153 (47%)
Query: 45 QCDT-CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPV---CDQLTGQCSCKPHVV 99
+C T C PGY G+ DC + C G + + + V C ++TG+C C P
Sbjct: 715 ECRTQCPPGYQGE-------DCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKT 767
Query: 100 GTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQP 157
G +C C G + + E C +C+ G+ +CDP TG CLC PG G+RC+ C
Sbjct: 768 GEDCGADCPEGRWGLGCQEICPACEH---GA---SCDPETGTCLCLPGFVGSRCQDACPA 821
Query: 158 NHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQC 188
+G GC+ C C +N C P+ G+C
Sbjct: 822 GWFG---TGCQMRCAC----ANDGHCHPATGRC 847
Score = 169 (64.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 56/159 (35%), Positives = 66/159 (41%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALAL--PKGDCE-PCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG +C C PG G+ P+G CQ P + CD TG C
Sbjct: 753 CHRVTG--EC-LCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGAS----CDPETGTCL 805
Query: 94 CKPHVVGTNC-DQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P VG+ C D C G + G GC+ C C G C P TG+C C PG TG
Sbjct: 806 CLPGFVGSRCQDACPAGWF----GTGCQMRCACANDGH----CHPATGRCSCAPGWTGLS 857
Query: 152 CE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C+ C H+G D PC C N CD SG C
Sbjct: 858 CQRACDSGHWG--PDCIHPCNCSAGHGN---CDAVSGLC 891
Score = 169 (64.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/171 (33%), Positives = 71/171 (41%)
Query: 35 LKCIYNTGGPQCDT------CLPGYFGDALALP--KG----DCEP-CQCYIPGTLETETF 81
L C GG CD C G+ GD P G CE C C T
Sbjct: 1089 LNCSCLNGGT-CDRLTGHCRCPAGWTGDKCQSPCVSGMFGVHCEEHCACRKGAT------ 1141
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITG 139
C +TG C C P G++C+Q C G + GE C + C C P S C ++G
Sbjct: 1142 ---CHHVTGACLCPPGWRGSHCEQACPRGWF----GEACAQRCHCPPGAS----CHHVSG 1190
Query: 140 QCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C C PG TG CE CQP +G + PC C P + C P SG C
Sbjct: 1191 ECHCPPGFTGPGCEQACQPGTFGKDCE--HPCQC-P--GETWACHPASGAC 1236
Score = 160 (61.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 56/170 (32%), Positives = 70/170 (41%)
Query: 37 CIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLETETFTP 83
CI GG CD C PG G PKG C + C C G
Sbjct: 570 CICQNGGT-CDPVSGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGR-------- 620
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC 141
C +L G C C P + G C C + G GC + C C+ S R+C+ G C
Sbjct: 621 -CHRLYGACLCDPGLYGRFCHLACPPWAF----GPGCSEDCLCEQ--SHTRSCNSKDGSC 673
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C+ G G RCE C+P +G GC+ C C P + CDP SG+C
Sbjct: 674 SCKAGFQGERCEAECEPGSFG---PGCRNRCTCRP----GVACDPVSGEC 716
Score = 152 (58.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 50/152 (32%), Positives = 63/152 (41%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFG-DALA-LPKG----DCEP-CQCYIPGTLETETFTPV 84
G+ C +G C C GY G D P G CE C+C GT
Sbjct: 1224 GETWACHPASGA--C-VCAAGYHGTDCQQRCPSGRYGPGCEQICKCLNGGT--------- 1271
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD TG C C +G +C C G + G C C C G+ CDP++G C+
Sbjct: 1272 CDPATGACYCPAGFLGADCSLACPQGRF----GPSCAHVCTCGQ-GA---ACDPVSGTCI 1323
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMC 172
C PG TG CE C + +G GC+ C C
Sbjct: 1324 CPPGKTGGHCERGCPQDRFG---KGCEHKCAC 1352
Score = 152 (58.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 56/184 (30%), Positives = 75/184 (40%)
Query: 20 PSDILKSVAGTTG-DCL-KCIYNTGGPQCD------TCLPGYFGDALALPKGDCEPCQCY 71
P+ + AG G +C C+ GG CD TC G+ G LA + +C P
Sbjct: 1029 PTCLQACPAGLYGKNCQHSCLCRNGG-SCDPILGQCTCPEGWTG--LAC-ENECLPGHHG 1084
Query: 72 IPGTLETETFTP-VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGS 129
L CD+LTG C C G C C G + + E C +C G+
Sbjct: 1085 AGCRLNCSCLNGGTCDRLTGHCRCPAGWTGDKCQSPCVSGMFGVHCEEHC-ACR---KGA 1140
Query: 130 LNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQC 188
TC +TG CLC PG G+ CE P G+ + C + C C P G++ C
Sbjct: 1141 ---TCHHVTGACLCPPGWRGSHCEQACPR--GWFGEACAQRCHCPP-GASCHHVSGECHC 1194
Query: 189 PGVF 192
P F
Sbjct: 1195 PPGF 1198
Score = 148 (57.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 50/157 (31%), Positives = 68/157 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSC 94
C TG +C +C PG+ G + A G P C P CD ++G C C
Sbjct: 840 CHPATG--RC-SCAPGWTGLSCQRACDSGHWGP-DCIHPCNCSAGHGN--CDAVSGLCLC 893
Query: 95 KPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
+ G C+Q C G++ G GC+ C C+ G+ TCD ++G C C G G+ C
Sbjct: 894 EAGYEGPQCEQWCRQGYF----GPGCEQKCRCEH-GA---TCDHVSGACTCPAGWRGSFC 945
Query: 153 ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
E P + F LD C C S CD +G C
Sbjct: 946 EHACPAGF-FGLDCGSACNC----SAGAPCDAVTGSC 977
Score = 145 (56.1 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 50/137 (36%), Positives = 61/137 (44%)
Query: 28 AGTTGD-CLK-CIYNTGGPQCDT----CL-PGYFGDALALPKGDCEPCQCYIPGTLE--- 77
AG G C + C G P CD CL P F +G C+P + G L+
Sbjct: 1425 AGFHGSGCQRVCECQQGAP-CDPVSGRCLCPAGFRGQFC-ERG-CKP-GFFGDGCLQQCN 1480
Query: 78 TETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCD 135
+ T P CD ++G C C P GT CD C G + G GC CDC G + CD
Sbjct: 1481 SPTGVP-CDPISGLCLCPPGRAGTTCDLDCRRGRF----GPGCALRCDCG--GGAD--CD 1531
Query: 136 PITGQCLCRPGVTGTRC 152
PI+GQC C TG C
Sbjct: 1532 PISGQCHCVDSYTGPTC 1548
Score = 139 (54.0 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 55/174 (31%), Positives = 72/174 (41%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C+ G +C D C G+FG + C C G C T
Sbjct: 801 TGTCL-CLPGFVGSRCQDACPAGWFGTGCQMR------CACANDGH---------CHPAT 844
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHY--NIISGEGCKSC--DCDPVGSLNRTCDP-ITG-QC- 141
G+CSC P G +C + C+ GH+ + I C + +CD V L C+ G QC
Sbjct: 845 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPQCE 903
Query: 142 -LCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
CR G G CE C+ H G + D C C P G C+ + CP F
Sbjct: 904 QWCRQGYFGPGCEQKCRCEH-GATCDHVSGACTC-PAGWRGSFCEHA--CPAGF 953
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 54/174 (31%), Positives = 71/174 (40%)
Query: 36 KCIYN-TGGPQCDTCL-P-GYFG-D-ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
KC+ T P C P G+ G D +LA P+G P ++ T CD ++G
Sbjct: 1265 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVC----TCGQGAACDPVSG 1320
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C C P G +C++ C + G+GC+ C C G L C G C C G
Sbjct: 1321 TCICPPGKTGGHCERGCPQDRF----GKGCEHKCACRN-GGL---CHATNGSCSCPLGWM 1372
Query: 149 GTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFMNRAE 197
G CE C YG + C C GS C+P SG C PG + E
Sbjct: 1373 GPHCEHACPAGRYGAAC--LLECSCQNNGS----CEPTSGACLCGPGFYGQACE 1420
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/113 (34%), Positives = 47/113 (41%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC------KSCDCDPVGSLNRTCDPIT 138
CD +C P + G CD C G II E C K+C + TCDP++
Sbjct: 526 CDDCRNGGTCFPGLDG--CD-CPEGWTGIICNETCPPDTFGKNCSSPCICQNGGTCDPVS 582
Query: 139 GQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGS-----NSLQCDP 184
G C C PGV+G CE C YG C K C C G + CDP
Sbjct: 583 GACRCPPGVSGAHCEDGCPKGFYG---KHCRKKCHCANRGRCHRLYGACLCDP 632
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 49/164 (29%), Positives = 58/164 (35%)
Query: 30 TTGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
T G C C GP C+ C G +G A L C C G+ C+
Sbjct: 1361 TNGSC-SCPLGWMGPHCEHACPAGRYGAACLLE------CSCQNNGS---------CEPT 1404
Query: 89 TGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCK---SCDCDPVGSLNRTCDPITGQ-CL- 142
+G C C P G C D C G + C+ CDPV GQ C
Sbjct: 1405 SGACLCGPGFYGQACEDTCPAGFHGSGCQRVCECQQGAPCDPVSGRCLCPAGFRGQFCER 1464
Query: 143 -CRPGVTGTRCELCQPNH-YGFSLDGCKP-CMCDPIGSNSLQCD 183
C+PG G C L Q N G D C+C P G CD
Sbjct: 1465 GCKPGFFGDGC-LQQCNSPTGVPCDPISGLCLCPP-GRAGTTCD 1506
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 54/191 (28%), Positives = 75/191 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQ-L 88
+G C +C G C D C G++G K + C C G +CD L
Sbjct: 582 SGAC-RCPPGVSGAHCEDGCPKGFYG------KHCRKKCHCANRGRCHRLYGACLCDPGL 634
Query: 89 TGQ-C--SCKPHVVGTNCDQ---CEVGHYNII-SGEG---CKS------CD--CDPVGSL 130
G+ C +C P G C + CE H S +G CK+ C+ C+P GS
Sbjct: 635 YGRFCHLACPPWAFGPGCSEDCLCEQSHTRSCNSKDGSCSCKAGFQGERCEAECEP-GSF 693
Query: 131 NRTCDPITGQCLCRPGVT----GTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP 184
C +C CRPGV C C P + G + C + C P+G+ + C
Sbjct: 694 GPGC---RNRCTCRPGVACDPVSGECRTQCPPGYQG---EDCGQEC---PVGTFGVNCSG 744
Query: 185 SGQCPGVFMNR 195
S C G +R
Sbjct: 745 SCSCVGAPCHR 755
>UNIPROTKB|F1MAP4 [details] [associations]
symbol:Megf10 "Protein Megf10" species:10116 "Rattus
norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0014719
"satellite cell activation" evidence=IEA] [GO:0014816 "satellite
cell differentiation" evidence=IEA] [GO:0014841 "satellite cell
proliferation" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0055001 "muscle cell
development" evidence=IEA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 RGD:735084
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147 CTD:84466
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AC095558
IPI:IPI00371424 RefSeq:NP_001094127.1 UniGene:Rn.224926
Ensembl:ENSRNOT00000037901 GeneID:291445 KEGG:rno:291445
NextBio:632612 Uniprot:F1MAP4
Length = 1145
Score = 191 (72.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 56/163 (34%), Positives = 72/163 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKG----DC-EPCQCYIPGTLETETFTPVCDQLT 89
C + TG +C +C G+ G P+G +C + CQC+ G CD T
Sbjct: 246 CHHVTG--EC-SCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGA---------CDAAT 293
Query: 90 GQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
GQC C P G C D+C VG Y + E C+ C G C ++G CLC G +
Sbjct: 294 GQCHCSPGYTGERCQDECPVGTYGVRCAETCR---CVNGGK----CYHVSGTCLCEAGFS 346
Query: 149 GTRCE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G CE LC YG D PC D N+ C P SG+C
Sbjct: 347 GEFCEARLCPEGLYGIKCDKRCPCHLD----NTHSCHPMSGEC 385
Score = 187 (70.9 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 50/155 (32%), Positives = 71/155 (45%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTG 90
KC + +G C+ G F +A P+G C+ C C++ T C ++G
Sbjct: 331 KCYHVSGTCLCEAGFSGEFCEARLCPEGLYGIKCDKRCPCHLDNTHS-------CHPMSG 383
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVT 148
+C CKP G C++ C G Y GE C+ C C G+ CD ++G+C C PG
Sbjct: 384 ECGCKPGWSGLYCNETCSPGFY----GEACQQICSCQN-GA---DCDSVSGRCACAPGFK 435
Query: 149 GTRCEL-CQPNHYGFSLD---GCK-PCMCDPI-GS 177
GT C C YG + GCK +C P+ GS
Sbjct: 436 GTDCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGS 470
Score = 172 (65.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 62/178 (34%), Positives = 74/178 (41%)
Query: 29 GTTG-DCLKCIYNTGGPQCD------TCLPGYFG---DALALP--KG-DCEP-CQCYIPG 74
GT G DC + G CD C PGY G + L P G CE C C G
Sbjct: 185 GTYGNDCHQRCQCQNGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGG 244
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNR 132
VC +TG+CSC +GT C Q C G + G+ C + C C G+
Sbjct: 245 ---------VCHHVTGECSCPSGWMGTVCGQPCPEGRF----GKNCSQECQCHNGGA--- 288
Query: 133 TCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQC-DPSGQC 188
CD TGQC C PG TG RC+ C YG + C C N +C SG C
Sbjct: 289 -CDAATGQCHCSPGYTGERCQDECPVGTYGVRC--AETCRC----VNGGKCYHVSGTC 339
Score = 170 (64.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 52/160 (32%), Positives = 70/160 (43%)
Query: 36 KCIYNTG-GPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
KC++ P C PG+ G + + GD C + +C+ +TG C
Sbjct: 112 KCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRA---LCNPITGACH 168
Query: 94 CKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G C D+CE G Y G C + C C G+ TCD ITG+C C PG TG
Sbjct: 169 CAAGYRGWRCEDRCEQGTY----GNDCHQRCQCQN-GA---TCDHITGECRCSPGYTGAF 220
Query: 152 CE-LCQPNHYGFSLDGCKPC----MCDPIGSNSLQCDPSG 186
CE LC P +G + PC +C + + C PSG
Sbjct: 221 CEDLCPPGKHGPQCEQRCPCQNGGVCHHV-TGECSC-PSG 258
Score = 164 (62.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD ++GQC+C+ +G +C+Q C G Y G GC+ CDC N TCD ITG C
Sbjct: 767 CDHISGQCTCRTGFMGRHCEQKCPAGTY----GYGCRQICDC----LNNSTCDHITGTCY 818
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 819 CSPGWKGARCD 829
Score = 158 (60.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 55/172 (31%), Positives = 73/172 (42%)
Query: 34 CLKCIYNTGGPQ-----CDTCLPGYFGDALA---LPKG----DCEP-CQCYIPGTLETET 80
C +C++++G CD CLPG+ G AL P G +C C C GT
Sbjct: 628 CPQCVHSSGPCHHITGLCD-CLPGFTG-ALCNEVCPSGRFGKNCAGVCTCTNNGT----- 680
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPIT 138
C+ + C C P +G++C Q C H+ G C +C+C G+ C
Sbjct: 681 ----CNPIDRSCQCYPGWIGSDCSQPCPPAHW----GPNCIHTCNCHN-GAF---CSAYD 728
Query: 139 GQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C PG TG C + C YG D C C N CD SGQC
Sbjct: 729 GECKCTPGWTGLYCTQRCPLGFYG--KDCALVCQCQ----NGADCDHISGQC 774
Score = 155 (59.6 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 41/123 (33%), Positives = 56/123 (45%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD ++G+C+C P GT+C C +G Y I C C D V C P+ G C+C
Sbjct: 421 CDSVSGRCACAPGFKGTDCSTPCPLGRYGINCSSRC-GCKNDAV------CSPVDGSCIC 473
Query: 144 RPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGS-NSLQCDPSGQC-PGVFMNRAEMS 199
+ G G C + C +GF GC C C G+ N+L D + C PG + E
Sbjct: 474 KAGWHGVDCSISCPSGTWGF---GCNLTCQCLNGGACNTL--DGTCTCAPGWRGEKCEFP 528
Query: 200 SDD 202
D
Sbjct: 529 CQD 531
Score = 151 (58.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 47/151 (31%), Positives = 60/151 (39%)
Query: 49 CLPGYFG-D-ALALPKGD----CE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
C G+ G D +++ P G C CQC G C+ L G C+C P G
Sbjct: 473 CKAGWHGVDCSISCPSGTWGFGCNLTCQCLNGGA---------CNTLDGTCTCAPGWRGE 523
Query: 102 NCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNH 159
C+ C+ G Y + E CDC C P TG C C PG +G C+ +C
Sbjct: 524 KCEFPCQDGTYGLNCAE---RCDCSHADG----CHPTTGHCRCLPGWSGVHCDSVCAEGR 576
Query: 160 YGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
+G C PC C N C P G C
Sbjct: 577 WG---PNCSLPCYC----KNGASCSPDDGIC 600
Score = 145 (56.1 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 46/143 (32%), Positives = 54/143 (37%)
Query: 40 NTGGPQCDTCLPGYFGDALALPKGD------C-EPCQCYIPGTLETETFTPVCDQLTGQC 92
NT C TC PG+ G+ P D C E C C + C TG C
Sbjct: 508 NTLDGTC-TCAPGWRGEKCEFPCQDGTYGLNCAERCDC---------SHADGCHPTTGHC 557
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C P G +CD C G + G C C C S C P G C C PG GT
Sbjct: 558 RCLPGWSGVHCDSVCAEGRW----GPNCSLPCYCKNGAS----CSPDDGICECAPGFRGT 609
Query: 151 RCE-LCQPNHYGFSLDG-CKPCM 171
C+ +C P YG C C+
Sbjct: 610 TCQRICSPGFYGHRCSQTCPQCV 632
Score = 140 (54.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 46/144 (31%), Positives = 58/144 (40%)
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQC 141
VC + G C CK G +C C G + G GC +C C G+ C+ + G C
Sbjct: 463 VCSPVDGSCICKAGWHGVDCSISCPSGTW----GFGCNLTCQCLNGGA----CNTLDGTC 514
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSL---------DGCKP----CMCDPIGSNSLQCD---- 183
C PG G +CE CQ YG + DGC P C C P G + + CD
Sbjct: 515 TCAPGWRGEKCEFPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLP-GWSGVHCDSVCA 573
Query: 184 -----PSGQCPGVFMNRAEMSSDD 202
P+ P N A S DD
Sbjct: 574 EGRWGPNCSLPCYCKNGASCSPDD 597
Score = 139 (54.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 45/151 (29%), Positives = 61/151 (40%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PG+ G + P C P + + P C +TG C C P G
Sbjct: 600 CE-CAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSG--P-CHHITGLCDCLPGFTGAL 655
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G + G+ C C C + N TC+PI C C PG G+ C + C P H
Sbjct: 656 CNEVCPSGRF----GKNCAGVCTC----TNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAH 707
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 708 WG---PNCIHTCNCH----NGAFCSAYDGEC 731
>MGI|MGI:1920951 [details] [associations]
symbol:Megf11 "multiple EGF-like-domains 11" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
MGI:MGI:1920951 GO:GO:0016021 GO:GO:0016323 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 GO:GO:0010842 GO:GO:0034109
HOGENOM:HOG000294130 Pfam:PF12661 GeneTree:ENSGT00690000101691
HSSP:P01132 HOVERGEN:HBG108333 OrthoDB:EOG42JNQJ CTD:84465
EMBL:AK122555 EMBL:AK048840 EMBL:AK051642 EMBL:AK160406
IPI:IPI00654415 IPI:IPI00752960 IPI:IPI00756127 IPI:IPI00986520
RefSeq:NP_001127871.1 RefSeq:NP_766110.3 UniGene:Mm.127721
UniGene:Mm.405602 ProteinModelPortal:Q80T91 SMR:Q80T91
STRING:Q80T91 PhosphoSite:Q80T91 PRIDE:Q80T91
Ensembl:ENSMUST00000068967 Ensembl:ENSMUST00000093829
Ensembl:ENSMUST00000118485 GeneID:214058 KEGG:mmu:214058
UCSC:uc009qby.2 UCSC:uc009qbz.2 UCSC:uc009qca.2 InParanoid:Q80T91
NextBio:374170 Bgee:Q80T91 CleanEx:MM_MEGF11 Genevestigator:Q80T91
Uniprot:Q80T91
Length = 1091
Score = 190 (71.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 64/189 (33%), Positives = 83/189 (43%)
Query: 29 GTTG-DCLK-CIYNTGGPQCDT------CLPGYFGDALA--LPKGD----C-EPCQCYIP 73
GT G +C + C + GG QCD C GY GD P G C + C C+
Sbjct: 264 GTFGQNCSQDCPCHHGG-QCDHVTGQCHCTAGYMGDRCQEECPFGTFGFLCSQRCDCHNG 322
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ--CEVGHYNIISGEGCK-SCDCDPVGSL 130
G C TG C C+P G +C + C G + G GC C CD ++
Sbjct: 323 GQ---------CSPATGACECEPGYKGPSCQERLCPEG----LHGPGCTLPCPCDTENTI 369
Query: 131 NRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQ 187
+ C P+TG C C+PG +G C E C +YG +GC+ PC C N C +G
Sbjct: 370 S--CHPVTGACTCQPGWSGHYCNESCPAGYYG---NGCQLPCTCQ----NGADCHSITGS 420
Query: 188 C---PGVFM 193
C PG FM
Sbjct: 421 CTCAPG-FM 428
Score = 178 (67.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 55/161 (34%), Positives = 71/161 (44%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALA---LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
+C TG +C+ PGY G + P+G P C +P +TE T C +TG C
Sbjct: 324 QCSPATGACECE---PGYKGPSCQERLCPEGLHGP-GCTLPCPCDTEN-TISCHPVTGAC 378
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
+C+P G C++ C G+Y G GC+ C C G+ C ITG C C PG G
Sbjct: 379 TCQPGWSGHYCNESCPAGYY----GNGCQLPCTCQN-GA---DCHSITGSCTCAPGFMGE 430
Query: 151 RCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C + C YG C C C SN C P G C
Sbjct: 431 VCAVPCAAGTYG---PNCSSVCSC----SNGGTCSPVDGSC 464
Score = 169 (64.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 62/182 (34%), Positives = 79/182 (43%)
Query: 28 AGTTG-DCLK-CIYNTGG---P---QCDTCLPGYFG-D-ALALPKG----DC-EPCQCYI 72
AGT G +C C + GG P C TC G+ G D +L P G +C E C C
Sbjct: 438 AGTYGPNCSSVCSCSNGGTCSPVDGSC-TCREGWQGLDCSLPCPSGTWGLNCNETCIC-A 495
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLN 131
G C G C+C P +G +C+ C G + + E CDC
Sbjct: 496 NGA--------ACSPFDGSCACTPGWLGDSCELPCPDGTFGLNCSE---HCDCSHADG-- 542
Query: 132 RTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQC- 188
CDP+TG C C G TG RC+ C P +G C C C+ GS S + D S +C
Sbjct: 543 --CDPVTGHCCCLAGWTGIRCDSTCPPGRWG---PNCSVSCSCENGGSCSPE-DGSCECA 596
Query: 189 PG 190
PG
Sbjct: 597 PG 598
Score = 167 (63.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 47/146 (32%), Positives = 67/146 (45%)
Query: 31 TGDCL--KCIYNTGGPQCDTCLPGYFGDALALPKG-DCEPCQCYIPGTLETETFTPVCDQ 87
T +C+ +C+ P C PG+ G + G D E + + + +C+
Sbjct: 103 TEECMHGRCV----SPDTCHCEPGWGGPDCS--SGCDSEHWGPHCSNRCQCQNGA-LCNP 155
Query: 88 LTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRP 145
+TG C C P G C++ C G + G+GC+ C C S CDP TG+CLC P
Sbjct: 156 ITGACVCAPGFRGWRCEELCAPGTH----GKGCQLLCQCHHGAS----CDPRTGECLCAP 207
Query: 146 GVTGTRCE-LCQPNHYGFSLDGCKPC 170
G TG CE LC P +G + PC
Sbjct: 208 GYTGVYCEELCPPGSHGAHCELRCPC 233
Score = 162 (62.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/153 (34%), Positives = 68/153 (44%)
Query: 49 CLPGYFG---DALALP----KGDCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
C PG+ G + L P KG C+ CQC+ + CD TG+C C P G
Sbjct: 162 CAPGFRGWRCEELCAPGTHGKG-CQLLCQCHHGAS---------CDPRTGECLCAPGYTG 211
Query: 101 TNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQP 157
C++ C G + G C+ C C G TC ITG+C C PG TG C + C P
Sbjct: 212 VYCEELCPPGSH----GAHCELRCPCQNGG----TCHHITGECACPPGWTGAVCAQPCPP 263
Query: 158 NHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C + C C G QCD +GQC
Sbjct: 264 GTFG---QNCSQDCPCHHGG----QCDHVTGQC 289
Score = 151 (58.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD +TG+C+C+ G +C+Q C G + G GC+ C+C N TCD +TG C
Sbjct: 760 CDHITGKCTCRTGFSGRHCEQRCAPGTF----GYGCQQLCEC----MNNATCDHVTGTCY 811
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 812 CSPGFKGIRCD 822
Score = 150 (57.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 56/173 (32%), Positives = 72/173 (41%)
Query: 33 DC-LKCIYNTGG---PQ---CDTCLPGYFGDALALPKGDCEPC----QCYIPGTLETETF 81
+C + C GG P+ C+ C PG+ G L + C P C P L +
Sbjct: 573 NCSVSCSCENGGSCSPEDGSCE-CAPGFRGP---LCQRICPPGFYGHGCAQPCPLCVHSR 628
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITG 139
P C ++G C C P G C+Q C GH+ G+ C C C + N TC PI G
Sbjct: 629 GP-CHHISGICECLPGFSGALCNQVCAGGHF----GQDCAQLCSC----ANNGTCSPIDG 679
Query: 140 QCLCRPGVTGTRCELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQC-PG 190
C C PG G C P+ GF C C C S S + D + C PG
Sbjct: 680 SCQCFPGWIGKDCSQACPS--GFWGSACFHTCSCHNGASCSAE-DGACHCTPG 729
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 53/176 (30%), Positives = 69/176 (39%)
Query: 29 GTTGDCLKCIYNTGGPQ-----CDTCLPGYFGDALA--LPKG-----DC-EPCQCYIPGT 75
G C C+++ G C+ CLPG+ G AL + G DC + C C GT
Sbjct: 616 GCAQPCPLCVHSRGPCHHISGICE-CLPGFSG-ALCNQVCAGGHFGQDCAQLCSCANNGT 673
Query: 76 LETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRT 133
C + G C C P +G +C Q C G + G C +C C S
Sbjct: 674 ---------CSPIDGSCQCFPGWIGKDCSQACPSGFW----GSACFHTCSCHNGAS---- 716
Query: 134 CDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C G C C PG TG C P+ + F D C C N CD +G+C
Sbjct: 717 CSAEDGACHCTPGWTGLFCTQRCPSAF-FGKDCGHICQCQ----NGASCDHITGKC 767
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 54/186 (29%), Positives = 75/186 (40%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQL 88
TG+C C G C C PG FG +C + C C+ G CD +
Sbjct: 243 TGECA-CPPGWTGAVCAQPCPPGTFGQ-------NCSQDCPCHHGGQ---------CDHV 285
Query: 89 TGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSC----DCDPV-GSLNRTCDP-ITG-Q 140
TGQC C +G C ++C G + + + C C C P G+ C+P G
Sbjct: 286 TGQCHCTAGYMGDRCQEECPFGTFGFLCSQRC-DCHNGGQCSPATGACE--CEPGYKGPS 342
Query: 141 C---LCRPGVTGTRCELCQPNHYGFSLDGCKP----CMCDPIGSNSLQCDPSGQCP-GVF 192
C LC G+ G C L P ++ C P C C P G + C+ S CP G +
Sbjct: 343 CQERLCPEGLHGPGCTLPCPCDTENTIS-CHPVTGACTCQP-GWSGHYCNES--CPAGYY 398
Query: 193 MNRAEM 198
N ++
Sbjct: 399 GNGCQL 404
>UNIPROTKB|F1MET4 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 GO:GO:0055001 GO:GO:0034109 GO:GO:0014816
Pfam:PF12661 GeneTree:ENSGT00690000101691 GO:GO:0043654
GO:GO:0051147 OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841
EMBL:DAAA02019789 EMBL:DAAA02019790 EMBL:DAAA02019791
EMBL:DAAA02019792 IPI:IPI00742600 UniGene:Bt.64852
Ensembl:ENSBTAT00000000434 NextBio:20877803 ArrayExpress:F1MET4
Uniprot:F1MET4
Length = 1136
Score = 190 (71.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 51/160 (31%), Positives = 74/160 (46%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTG 90
KC + +G C+ G +A P+G C+ C C++ TL C ++G
Sbjct: 331 KCYHVSGSCLCEAGFSGDRCEARLCPEGLYGIRCDKRCPCHVDNTLS-------CHPMSG 383
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVT 148
+C+CKP G C++ C G Y GE C+ C C G+ CD +TG+C+C PG
Sbjct: 384 ECACKPGWSGLYCNETCSPGFY----GEACQQICSCQN-GA---DCDSVTGKCICAPGFK 435
Query: 149 GTRCEL-CQPNHYGF---SLDGCK-PCMCDPIGSNSLQCD 183
G C + C YG SL CK +C P+ S C+
Sbjct: 436 GIDCSIPCPLGTYGINCSSLCSCKNDAVCSPV-DGSCTCN 474
Score = 185 (70.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 64/178 (35%), Positives = 75/178 (42%)
Query: 29 GTTG-DCLKCIYNTGGPQCD------TCLPGYFG---DALALP--KG-DCEP-CQCYIPG 74
GT G DC + G CD C PGY G + L P G CE C C G
Sbjct: 185 GTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGG 244
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNR 132
VC +TG+CSC P +GT C Q C G + G+ C + C C G
Sbjct: 245 ---------VCHHVTGECSCPPGWLGTVCGQPCPEGRF----GKNCSQECQCHNGG---- 287
Query: 133 TCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQC-DPSGQC 188
TCD TGQC C PG TG RC+ C YG + C C N +C SG C
Sbjct: 288 TCDAATGQCHCSPGYTGERCQDECPVGTYGVHC--AETCQC----INGGKCYHVSGSC 339
Score = 164 (62.8 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD ++GQC+C+ +G +C+Q C G Y G GC+ CDC N TCD ITG C
Sbjct: 767 CDHISGQCTCRTGFMGKHCEQKCPAGTY----GYGCRQICDC----LNNSTCDHITGTCY 818
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 819 CSPGWKGARCD 829
Score = 158 (60.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 55/172 (31%), Positives = 73/172 (42%)
Query: 34 CLKCIYNTGGPQ-----CDTCLPGYFGDALA---LPKG----DCEP-CQCYIPGTLETET 80
C +C++++G CD CLPG+ G AL P G +C C C GT
Sbjct: 628 CPQCVHSSGPCHHITGLCD-CLPGFTG-ALCNEVCPSGRFGKNCAGICTCTNNGT----- 680
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPIT 138
C+ + C C P +G++C Q C H+ G C +C+C G+ C
Sbjct: 681 ----CNPIDRSCQCYPGWIGSDCSQPCPPAHW----GPNCIHTCNCHN-GAF---CSAYD 728
Query: 139 GQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C PG TG C + C YG D C C N CD SGQC
Sbjct: 729 GECKCTPGWTGLYCTQRCPLGFYG--KDCALVCQCQ----NGADCDHISGQC 774
Score = 146 (56.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 49/134 (36%), Positives = 62/134 (46%)
Query: 69 QCYIPGTLET-ETFTPVC-DQLT-GQC------SCKPHVVGTNCDQ-CEVGHYNIISGEG 118
QC PG E+ E P C D+ G+C C+P GTNC C+ H+ G
Sbjct: 93 QC-CPGFYESREMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHW----GPH 147
Query: 119 CKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGC-KPCMCDPI 175
C S C C G+L C+PITG C C G G RCE C+ YG + C + C C
Sbjct: 148 CSSRCQCKN-GAL---CNPITGACHCAAGFRGWRCEERCEQGTYG---NDCHQRCQCQ-- 198
Query: 176 GSNSLQCDP-SGQC 188
N CD +G+C
Sbjct: 199 --NGATCDHVTGEC 210
Score = 146 (56.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 46/143 (32%), Positives = 54/143 (37%)
Query: 40 NTGGPQCDTCLPGYFGDALALPKGD------C-EPCQCYIPGTLETETFTPVCDQLTGQC 92
NT C TC PG+ G+ P D C E C C + C TG C
Sbjct: 508 NTLDGTC-TCAPGWRGEKCEFPCQDGTYGLNCAERCDC---------SHADGCHSTTGHC 557
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C P G +CD C G + G C C C S C P G C C PG GT
Sbjct: 558 RCLPGWSGVHCDSVCAEGRW----GPNCSLPCYCKNGAS----CSPDDGICECAPGFRGT 609
Query: 151 RCE-LCQPNHYGFSLDG-CKPCM 171
C+ +C P YG C C+
Sbjct: 610 TCQRICSPGFYGHRCSQTCPQCV 632
Score = 139 (54.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 45/151 (29%), Positives = 61/151 (40%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PG+ G + P C P + + P C +TG C C P G
Sbjct: 600 CE-CAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSG--P-CHHITGLCDCLPGFTGAL 655
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G + G+ C C C + N TC+PI C C PG G+ C + C P H
Sbjct: 656 CNEVCPSGRF----GKNCAGICTC----TNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAH 707
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 708 WG---PNCIHTCNCH----NGAFCSAYDGEC 731
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 53/180 (29%), Positives = 73/180 (40%)
Query: 29 GTTGD-CLKCIYNTGGPQCDT------CLPGYFGDALALPKGDCEPCQCY-IP-GTLETE 79
G G+ C + G CD+ C PG+ G ++P C P Y I +L +
Sbjct: 403 GFYGEACQQICSCQNGADCDSVTGKCICAPGFKGIDCSIP---C-PLGTYGINCSSLCSC 458
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPI 137
VC + G C+C G +C C G + G GC +C C G+ C+ +
Sbjct: 459 KNDAVCSPVDGSCTCNAGWHGVDCSISCPSGTW----GFGCNLTCQCLNGGA----CNTL 510
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGFSL---------DGCKP----CMCDPIGSNSLQCD 183
G C C PG G +CE CQ YG + DGC C C P G + + CD
Sbjct: 511 DGTCTCAPGWRGEKCEFPCQDGTYGLNCAERCDCSHADGCHSTTGHCRCLP-GWSGVHCD 569
>MGI|MGI:2446294 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO;IMP] [GO:0071907 "determination
of digestive tract left/right asymmetry" evidence=ISO;IMP]
[GO:1900164 "nodal signaling pathway involved in determination of
lateral mesoderm left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:2446294 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:1954 eggNOG:NOG304142
HOVERGEN:HBG108128 OMA:GHSMVFH EMBL:EU723517 EMBL:BC031185
EMBL:BC036727 EMBL:BC051121 EMBL:BC060277 EMBL:AK122377
EMBL:AK030408 IPI:IPI00930841 RefSeq:NP_001153872.1
UniGene:Mm.38527 ProteinModelPortal:P60882 SMR:P60882
PhosphoSite:P60882 PaxDb:P60882 PRIDE:P60882
Ensembl:ENSMUST00000128119 GeneID:269878 KEGG:mmu:269878
UCSC:uc009fsj.2 InParanoid:B3GR00 OrthoDB:EOG4JHCDR NextBio:393077
Bgee:P60882 CleanEx:MM_MEGF8 Genevestigator:P60882
GermOnline:ENSMUSG00000045039 Uniprot:P60882
Length = 2789
Score = 155 (59.6 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 35/93 (37%), Positives = 45/93 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C T G C+ C PG FG+A G C PCQC G + CD LTG
Sbjct: 1177 GYCDECQDWTWGEHCERCRPGSFGNATG--SGGCRPCQCNGHG----DPRRGHCDNLTGL 1230
Query: 92 CSCKPHVVGTNCDQCEVGHY-NIISGEGC-KSC 122
C C+ H G +C C G+Y + +G C + C
Sbjct: 1231 CFCQDHTEGAHCQICSPGYYGDPRAGGSCFREC 1263
Score = 152 (58.6 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 90 GQCS-CKPHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRT-CDPITGQCLCRPG 146
G C C+ G +C++C G + +G G C+ C C+ G R CD +TG C C+
Sbjct: 1177 GYCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLTGLCFCQDH 1236
Query: 147 VTGTRCELCQPNHYG 161
G C++C P +YG
Sbjct: 1237 TEGAHCQICSPGYYG 1251
Score = 70 (29.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 141 CL-CRPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSGQCP 189
C+ C+ G RCE C H F LDG C C C+ + D +G CP
Sbjct: 2295 CVNCQNNSYGDRCESCL--HGYFLLDGKCTKCQCNGHADTCNEQDGTG-CP 2342
Score = 44 (20.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPC 170
+P V GT LC P FS D PC
Sbjct: 1313 QPCVPGT---LCPPLTLTFSPDSSTPC 1336
Score = 42 (19.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 139 GQCLCRPGVTGTRCE--LCQPN---HYGFSL--DGCKPCMC 172
G C C G G C LC N H G + C+C
Sbjct: 1431 GLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSLGVCIC 1471
>UNIPROTKB|E2RQ32 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055001 "muscle cell development"
evidence=IEA] [GO:0051147 "regulation of muscle cell
differentiation" evidence=IEA] [GO:0048641 "regulation of skeletal
muscle tissue development" evidence=IEA] [GO:0043654 "recognition
of apoptotic cell" evidence=IEA] [GO:0034109 "homotypic cell-cell
adhesion" evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891 GO:GO:0048641
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
OMA:FGCNLTC GO:GO:0014719 GO:GO:0014841 EMBL:AAEX03007755
ProteinModelPortal:E2RQ32 Ensembl:ENSCAFT00000000947 Uniprot:E2RQ32
Length = 1150
Score = 186 (70.5 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 50/159 (31%), Positives = 73/159 (45%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTG 90
KC + +G C+ G +A P+G C+ C C++ T C ++G
Sbjct: 331 KCYHVSGSCLCEAGFAGEHCEARLCPEGLYGIKCDKRCPCHLDNTHS-------CHPMSG 383
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVT 148
+C+CKP G C++ C G + GE C+ C C G+ CD +TG+C+C PG
Sbjct: 384 ECACKPGWSGLYCNETCSPGFF----GEACQQICSCHN-GA---DCDSVTGKCICAPGFK 435
Query: 149 GTRCEL-CQPNHYGF---SLDGCK-PCMCDPIGSNSLQC 182
G C + C YG SL GCK +C P+ S C
Sbjct: 436 GIDCSIPCPLETYGINCSSLCGCKNDAVCSPV-DGSCTC 473
Score = 176 (67.0 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 62/178 (34%), Positives = 74/178 (41%)
Query: 29 GTTG-DCLKCIYNTGGPQCD------TCLPGYFG---DALALP--KG-DCEP-CQCYIPG 74
GT G DC + G CD C PGY G + L P G CE C C G
Sbjct: 185 GTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGG 244
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNR 132
+C +TG+CSC +GT C Q C G + G+ C + C C G
Sbjct: 245 ---------ICHHVTGECSCPSGWLGTVCGQPCPEGRF----GKNCSQECQCHNGG---- 287
Query: 133 TCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQC-DPSGQC 188
TCD TGQC C PG TG RC+ C YG + C C N +C SG C
Sbjct: 288 TCDAATGQCHCSPGYTGERCQDECPVGTYGVRC--AETCQC----VNGGKCYHVSGSC 339
Score = 164 (62.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD ++GQC+C+ +G +C+Q C G Y G GC+ CDC N TCD ITG C
Sbjct: 767 CDHISGQCTCRTGFMGKHCEQKCPAGTY----GYGCRQICDC----LNNSTCDHITGTCY 818
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 819 CSPGWKGARCD 829
Score = 157 (60.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 53/163 (32%), Positives = 64/163 (39%)
Query: 28 AGTTG-DC---LKCIY----NTGGPQCDTCLPGYFGDALALPKGD------C-EPCQCYI 72
+GT G C +C++ NT C TC PG+ GD LP D C E C C
Sbjct: 488 SGTWGFSCNLTCQCLHGGACNTQDGTC-TCAPGWRGDKCELPCQDGTYGLNCAERCDC-- 544
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSL 130
+ C TG C C P G +CD C G + G C C C S
Sbjct: 545 -------SHADGCHSTTGHCRCLPGWSGVHCDSVCAEGRW----GPNCSLPCYCKNGAS- 592
Query: 131 NRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDG-CKPCM 171
C P G C C PG GT C+ +C P YG C C+
Sbjct: 593 ---CSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCV 632
Score = 157 (60.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 55/172 (31%), Positives = 73/172 (42%)
Query: 34 CLKCIYNTGGPQ-----CDTCLPGYFGDALA---LPKG----DCEP-CQCYIPGTLETET 80
C +C++++G CD CLPG+ G AL P G +C C C GT
Sbjct: 628 CPQCVHSSGPCHHITGLCD-CLPGFTG-ALCNEVCPSGRFGKNCAGVCTCTNNGT----- 680
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPIT 138
C+ + C C P +G++C Q C H+ G C +C+C G+ C
Sbjct: 681 ----CNPIDRSCQCYPGWIGSDCSQPCPPAHW----GPNCIHTCNCHN-GAF---CSAYD 728
Query: 139 GQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C PG TG C + C YG D C C N CD SGQC
Sbjct: 729 GECKCTPGWTGLYCTQRCPLGFYG--KDCALICQCQ----NGADCDHISGQC 774
Score = 146 (56.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 49/134 (36%), Positives = 62/134 (46%)
Query: 69 QCYIPGTLET-ETFTPVC-DQLT-GQC------SCKPHVVGTNCDQ-CEVGHYNIISGEG 118
QC PG E+ E P C D+ G+C C+P GTNC C+ H+ G
Sbjct: 93 QC-CPGFYESREMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHW----GPH 147
Query: 119 CKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGC-KPCMCDPI 175
C S C C G+L C+PITG C C G G RCE C+ YG + C + C C
Sbjct: 148 CSSRCQCKN-GAL---CNPITGACHCAAGFRGWRCEDRCEQGTYG---NDCHQRCQCQ-- 198
Query: 176 GSNSLQCDP-SGQC 188
N CD +G+C
Sbjct: 199 --NGATCDHVTGEC 210
Score = 139 (54.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 38/122 (31%), Positives = 54/122 (44%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD +TG+C C P G +C C + Y I C S C C + C P+ G C
Sbjct: 421 CDSVTGKCICAPGFKGIDCSIPCPLETYGI----NCSSLCGCKN----DAVCSPVDGSCT 472
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC-PGVFMNRAEMSS 200
C+ G G C + C +GFS + C C G+ + Q D + C PG ++ E+
Sbjct: 473 CKAGWHGVDCSISCPSGTWGFSCN--LTCQCLHGGACNTQ-DGTCTCAPGWRGDKCELPC 529
Query: 201 DD 202
D
Sbjct: 530 QD 531
Score = 139 (54.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 45/151 (29%), Positives = 61/151 (40%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PG+ G + P C P + + P C +TG C C P G
Sbjct: 600 CE-CAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSG--P-CHHITGLCDCLPGFTGAL 655
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G + G+ C C C + N TC+PI C C PG G+ C + C P H
Sbjct: 656 CNEVCPSGRF----GKNCAGVCTC----TNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAH 707
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 708 WG---PNCIHTCNCH----NGAFCSAYDGEC 731
>RGD|621190 [details] [associations]
symbol:Megf8 "multiple EGF-like-domains 8" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=ISO] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002165
InterPro:IPR015915 InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645
PROSITE:PS01187 PROSITE:PS50026 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:621190 GO:GO:0016021 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 eggNOG:NOG304142 HOGENOM:HOG000113554
HOVERGEN:HBG108128 OrthoDB:EOG4JHCDR EMBL:AABR03001918
EMBL:AABR03001941 EMBL:AABR03004237 EMBL:AB011534 IPI:IPI00766905
UniGene:Rn.21378 ProteinModelPortal:Q9QYP0 IntAct:Q9QYP0
STRING:Q9QYP0 PhosphoSite:Q9QYP0 PRIDE:Q9QYP0
Ensembl:ENSRNOT00000027831 UCSC:RGD:621190 InParanoid:Q9QYP0
Genevestigator:Q9QYP0 Uniprot:Q9QYP0
Length = 2788
Score = 151 (58.2 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 34/93 (36%), Positives = 45/93 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C T G C+ C PG FG+A G C PCQC G + CD L+G
Sbjct: 1177 GYCDECQDWTWGEHCERCRPGSFGNATG--SGGCRPCQCNGHG----DPRRGHCDNLSGL 1230
Query: 92 CSCKPHVVGTNCDQCEVGHY-NIISGEGC-KSC 122
C C+ H G +C C G+Y + +G C + C
Sbjct: 1231 CFCQDHTEGAHCQICSPGYYGDPRAGGSCFREC 1263
Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 90 GQCS-CKPHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRT-CDPITGQCLCRPG 146
G C C+ G +C++C G + +G G C+ C C+ G R CD ++G C C+
Sbjct: 1177 GYCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDH 1236
Query: 147 VTGTRCELCQPNHYG 161
G C++C P +YG
Sbjct: 1237 TEGAHCQICSPGYYG 1251
Score = 70 (29.7 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 141 CL-CRPGVTGTRCELCQPNHYGFSLDG-CKPCMCDPIGSNSLQCDPSGQCP 189
C+ C+ G RCE C H F LDG C C C+ + D +G CP
Sbjct: 2294 CVNCQNNSYGDRCESCL--HGYFLLDGKCTKCQCNGHADTCNEQDGTG-CP 2341
Score = 42 (19.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 139 GQCLCRPGVTGTRCE--LCQPN---HYGFSL--DGCKPCMC 172
G C C G G C LC N H G + C+C
Sbjct: 1431 GLCRCPQGWAGPHCRMALCPENCNAHTGAGICNQSLGVCIC 1471
Score = 40 (19.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPC 170
+P GT LC P FS D PC
Sbjct: 1313 QPCAPGT---LCPPLTLTFSPDSSTPC 1336
>WB|WBGene00000415 [details] [associations]
symbol:ced-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0043652
"engulfment of apoptotic cell" evidence=IMP] [GO:0043654
"recognition of apoptotic cell" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=ISS;IPI] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0031260 "pseudopodium membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0001891 "phagocytic
cup" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 183 (69.5 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 58/174 (33%), Positives = 77/174 (44%)
Query: 21 SDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD--ALALPKGDCEPCQCYIPGTLET 78
+D K+ + L C NTG C C PG++GD LA K P C +
Sbjct: 378 ADCSKTCTCVRENTLMCAPNTGF--C-RCKPGFYGDNCELACSKDSYGP-NCEKQAMCDW 433
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDP 136
+ C+ TG C CKP G NC + C + Y G C C C+ G CD
Sbjct: 434 NHASE-CNPETGSCVCKPGRTGKNCSEPCPLDFY----GPNCAHQCQCNQRGV---GCDG 485
Query: 137 ITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C G TG RCE C + +G + + K C C P G + CDP +G+C
Sbjct: 486 ADGKCQCDRGWTGHRCEHHCPADTFGANCE--KRCKC-PKG---IGCDPITGEC 533
Score = 180 (68.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 53/174 (30%), Positives = 75/174 (43%)
Query: 36 KCIYNTG--GPQCDT-CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
KCI +G G C+ C G+FG G + C C L + CD +G+C
Sbjct: 263 KCICKSGYHGALCENECSVGFFGS------GCTQKCDC-----LNNQN----CDSSSGEC 307
Query: 93 SCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G +CD C G + + + C +C N +CD TGQC C G G +
Sbjct: 308 KCIGWT-GKHCDIGCSRGRFGLQCKQNC-TCPGLEFSDSNASCDAKTGQCQCESGYKGPK 365
Query: 152 CE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAEMS 199
C+ C YG D K C C + N+L C P+ G C PG + + E++
Sbjct: 366 CDERKCDAEQYG--ADCSKTCTC--VRENTLMCAPNTGFCRCKPGFYGDNCELA 415
Score = 174 (66.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 44/124 (35%), Positives = 58/124 (46%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCL 142
CD +TG+C+C + G NCD C G Y G GCK C C +N CD TG+C
Sbjct: 526 CDPITGECTCPAGLQGANCDIGCPEGSY----GPGCKLHCKC-----VNGKCDKETGECT 576
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLD--------GCKP----CMCDPIGSNSLQCDPSGQC- 188
C+PG G+ C C YG S + C C+C P+G+ + CD +C
Sbjct: 577 CQPGFFGSDCSTTCSKGKYGESCELSCPCSDASCSKQTGKCLC-PLGTKGVSCDQ--KCD 633
Query: 189 PGVF 192
P F
Sbjct: 634 PNTF 637
Score = 166 (63.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 52/169 (30%), Positives = 68/169 (40%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDC-EPCQCYIPGT-----LETETFT 82
G DC KC G CD + G L C PC G +
Sbjct: 727 GCALDCPKC---ASGSTCDH-INGLCICPAGLEGALCTRPCSAGFWGNGCRQVCRCTSEY 782
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQ 140
C+ TG+CSC G CD+ CE G+Y G C K C C G+ +C+ ++G
Sbjct: 783 KQCNAQTGECSCPAGFQGDRCDKPCEDGYY----GPDCIKKCKCQ--GTATSSCNRVSGA 836
Query: 141 CLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C C PG TG C LC + +G K C D G + +CD + C
Sbjct: 837 CHCHPGFTGEFCHALCPESTFGLKCS--KECPKDGCG-DGYECDAAIGC 882
Score = 165 (63.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 55/142 (38%), Positives = 65/142 (45%)
Query: 62 KG-DCEP-CQCYIPGTLETETFTPV-C---DQLTGQC-SCKPHVVGTNCDQ-CEVGHYNI 113
KG C+ C G L ET TP C D G C SC P G +C+ C G Y
Sbjct: 624 KGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSY-- 681
Query: 114 ISGEGCKS-CDC-DPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGF--SLDGCK 168
G+GC+ C C D G CDP TG+C+C PG G C E C YG+ +LD C
Sbjct: 682 --GDGCQQVCSCADGHG-----CDPTTGECICEPGYHGKTCSEKCPDGKYGYGCALD-CP 733
Query: 169 PCM----CDPIGSNSLQCDPSG 186
C CD I N L P+G
Sbjct: 734 KCASGSTCDHI--NGLCICPAG 753
Score = 162 (62.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/161 (32%), Positives = 71/161 (44%)
Query: 36 KCIYNTGGPQCDTCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQC 92
KC TG +C TC PG+FG + KG E C+ P + + C + TG+C
Sbjct: 567 KCDKETG--EC-TCQPGFFGSDCSTTCSKGKYGESCELSCPCSDAS------CSKQTGKC 617
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGT 150
C G +CDQ C+ + + E C + DP G CL C PG +G
Sbjct: 618 LCPLGTKGVSCDQKCDPNTFGFLCQETVTPSPC-------ASTDPKNGVCLSCPPGSSGI 670
Query: 151 RCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQC 188
CE C YG DGC+ C C ++ CDP+ G+C
Sbjct: 671 HCEHNCPAGSYG---DGCQQVCSC----ADGHGCDPTTGEC 704
Score = 156 (60.0 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 40/103 (38%), Positives = 49/103 (47%)
Query: 90 GQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C C P G C C VG + G GC KSCDC+ G+ CDP G C+C G
Sbjct: 134 GKCECDPGYGGKYCASSCSVGTW----GLGCSKSCDCEN-GA---NCDPELGTCICTSGF 185
Query: 148 TGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQC 188
G RCE C N +G C K C C N +C+ G+C
Sbjct: 186 QGERCEKPCPDNKWG---PNCVKSCPCQ----NGGKCNKEGKC 221
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 65/209 (31%), Positives = 84/209 (40%)
Query: 14 LLCVGPPSDILKSVAGTTGD-C-LKCIYNTGGPQCDT-----------CLPGYFGDALAL 60
L+C P + + G GD C L C ++ GP C+ C P G +
Sbjct: 392 LMCA-PNTGFCRCKPGFYGDNCELACSKDSYGPNCEKQAMCDWNHASECNPET-GSCVCK 449
Query: 61 P--KG-DC-EPCQC--YIPGTL---ETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGH 110
P G +C EPC Y P + CD G+C C G C+ C
Sbjct: 450 PGRTGKNCSEPCPLDFYGPNCAHQCQCNQRGVGCDGADGKCQCDRGWTGHRCEHHCPADT 509
Query: 111 YNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK 168
+ G C K C C P G CDPITG+C C G+ G C++ C YG GCK
Sbjct: 510 F----GANCEKRCKC-PKGI---GCDPITGECTCPAGLQGANCDIGCPEGSYG---PGCK 558
Query: 169 -PCMCDPIGSNSLQCDP-SGQC---PGVF 192
C C N +CD +G+C PG F
Sbjct: 559 LHCKC----VNG-KCDKETGECTCQPGFF 582
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 55/178 (30%), Positives = 72/178 (40%)
Query: 29 GTTG-DCLKCIYNTGGPQCD----TCL--PGYFGDALALPKGD------C-EPCQCYIPG 74
GT G C K G CD TC+ G+ G+ P D C + C C G
Sbjct: 154 GTWGLGCSKSCDCENGANCDPELGTCICTSGFQGERCEKPCPDNKWGPNCVKSCPCQNGG 213
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNR 132
E G+C C G C ++CE G + G CK C+C G+
Sbjct: 214 KCNKE----------GKCVCSDGWGGEFCLNKCEEGKF----GAECKFECNCQN-GA--- 255
Query: 133 TCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
TCD G+C+C+ G G CE C +G GC CD + N+ CD S G+C
Sbjct: 256 TCDNTNGKCICKSGYHGALCENECSVGFFG---SGCTQ-KCDCL--NNQNCDSSSGEC 307
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 45/163 (27%), Positives = 60/163 (36%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G CL C + G C+ C G +GD G + C C G CD TG
Sbjct: 658 GVCLSCPPGSSGIHCEHNCPAGSYGD------GCQQVCSC-ADGH--------GCDPTTG 702
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSC----DCDPVGSLNRTCDPITGQCLCRP 145
+C C+P G C ++C G Y C C CD + L + G RP
Sbjct: 703 ECICEPGYHGKTCSEKCPDGKYGYGCALDCPKCASGSTCDHINGLCICPAGLEGALCTRP 762
Query: 146 ---GVTGTRC-ELCQ-PNHYGFSLDGCKPCMCDPIGSNSLQCD 183
G G C ++C+ + Y C C P G +CD
Sbjct: 763 CSAGFWGNGCRQVCRCTSEYKQCNAQTGECSC-PAGFQGDRCD 804
>UNIPROTKB|Q9XWD6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6239 "Caenorhabditis elegans" [GO:0001845 "phagolysosome
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IDA;IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0034620 "cellular response to unfolded protein"
evidence=IDA] [GO:0045184 "establishment of protein localization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IDA]
[GO:0012501 "programmed cell death" evidence=IMP] [GO:0009986 "cell
surface" evidence=IDA] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
GO:GO:0001891 PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 HSSP:P46531 GO:GO:0043652 GO:GO:0012501
GO:GO:0034620 InterPro:IPR006212 SMART:SM00261 GO:GO:0005044
HOGENOM:HOG000294130 GO:GO:0001845 EMBL:AF332568 EMBL:AL032657
PIR:T26972 RefSeq:NP_001021772.1 RefSeq:NP_001021773.1
RefSeq:NP_001076621.1 RefSeq:NP_740922.1 UniGene:Cel.7093
ProteinModelPortal:Q9XWD6 SMR:Q9XWD6 IntAct:Q9XWD6 MINT:MINT-223151
STRING:Q9XWD6 PaxDb:Q9XWD6 PRIDE:Q9XWD6 EnsemblMetazoa:Y47H9C.4a
GeneID:173064 KEGG:cel:CELE_Y47H9C.4 UCSC:Y47H9C.4a CTD:173064
WormBase:Y47H9C.4a WormBase:Y47H9C.4b WormBase:Y47H9C.4c
WormBase:Y47H9C.4d GeneTree:ENSGT00690000101691 InParanoid:Q9XWD6
OMA:VYNDTEQ NextBio:878121 GO:GO:0031260 GO:GO:0043654
Uniprot:Q9XWD6
Length = 1111
Score = 183 (69.5 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 58/174 (33%), Positives = 77/174 (44%)
Query: 21 SDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD--ALALPKGDCEPCQCYIPGTLET 78
+D K+ + L C NTG C C PG++GD LA K P C +
Sbjct: 378 ADCSKTCTCVRENTLMCAPNTGF--C-RCKPGFYGDNCELACSKDSYGP-NCEKQAMCDW 433
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDP 136
+ C+ TG C CKP G NC + C + Y G C C C+ G CD
Sbjct: 434 NHASE-CNPETGSCVCKPGRTGKNCSEPCPLDFY----GPNCAHQCQCNQRGV---GCDG 485
Query: 137 ITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C G TG RCE C + +G + + K C C P G + CDP +G+C
Sbjct: 486 ADGKCQCDRGWTGHRCEHHCPADTFGANCE--KRCKC-PKG---IGCDPITGEC 533
Score = 180 (68.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 53/174 (30%), Positives = 75/174 (43%)
Query: 36 KCIYNTG--GPQCDT-CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
KCI +G G C+ C G+FG G + C C L + CD +G+C
Sbjct: 263 KCICKSGYHGALCENECSVGFFGS------GCTQKCDC-----LNNQN----CDSSSGEC 307
Query: 93 SCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G +CD C G + + + C +C N +CD TGQC C G G +
Sbjct: 308 KCIGWT-GKHCDIGCSRGRFGLQCKQNC-TCPGLEFSDSNASCDAKTGQCQCESGYKGPK 365
Query: 152 CE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAEMS 199
C+ C YG D K C C + N+L C P+ G C PG + + E++
Sbjct: 366 CDERKCDAEQYG--ADCSKTCTC--VRENTLMCAPNTGFCRCKPGFYGDNCELA 415
Score = 174 (66.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 44/124 (35%), Positives = 58/124 (46%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCL 142
CD +TG+C+C + G NCD C G Y G GCK C C +N CD TG+C
Sbjct: 526 CDPITGECTCPAGLQGANCDIGCPEGSY----GPGCKLHCKC-----VNGKCDKETGECT 576
Query: 143 CRPGVTGTRCEL-CQPNHYGFSLD--------GCKP----CMCDPIGSNSLQCDPSGQC- 188
C+PG G+ C C YG S + C C+C P+G+ + CD +C
Sbjct: 577 CQPGFFGSDCSTTCSKGKYGESCELSCPCSDASCSKQTGKCLC-PLGTKGVSCDQ--KCD 633
Query: 189 PGVF 192
P F
Sbjct: 634 PNTF 637
Score = 166 (63.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 52/169 (30%), Positives = 68/169 (40%)
Query: 29 GTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDC-EPCQCYIPGT-----LETETFT 82
G DC KC G CD + G L C PC G +
Sbjct: 727 GCALDCPKC---ASGSTCDH-INGLCICPAGLEGALCTRPCSAGFWGNGCRQVCRCTSEY 782
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQ 140
C+ TG+CSC G CD+ CE G+Y G C K C C G+ +C+ ++G
Sbjct: 783 KQCNAQTGECSCPAGFQGDRCDKPCEDGYY----GPDCIKKCKCQ--GTATSSCNRVSGA 836
Query: 141 CLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C C PG TG C LC + +G K C D G + +CD + C
Sbjct: 837 CHCHPGFTGEFCHALCPESTFGLKCS--KECPKDGCG-DGYECDAAIGC 882
Score = 165 (63.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 55/142 (38%), Positives = 65/142 (45%)
Query: 62 KG-DCEP-CQCYIPGTLETETFTPV-C---DQLTGQC-SCKPHVVGTNCDQ-CEVGHYNI 113
KG C+ C G L ET TP C D G C SC P G +C+ C G Y
Sbjct: 624 KGVSCDQKCDPNTFGFLCQETVTPSPCASTDPKNGVCLSCPPGSSGIHCEHNCPAGSY-- 681
Query: 114 ISGEGCKS-CDC-DPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGF--SLDGCK 168
G+GC+ C C D G CDP TG+C+C PG G C E C YG+ +LD C
Sbjct: 682 --GDGCQQVCSCADGHG-----CDPTTGECICEPGYHGKTCSEKCPDGKYGYGCALD-CP 733
Query: 169 PCM----CDPIGSNSLQCDPSG 186
C CD I N L P+G
Sbjct: 734 KCASGSTCDHI--NGLCICPAG 753
Score = 162 (62.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/161 (32%), Positives = 71/161 (44%)
Query: 36 KCIYNTGGPQCDTCLPGYFGD--ALALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQC 92
KC TG +C TC PG+FG + KG E C+ P + + C + TG+C
Sbjct: 567 KCDKETG--EC-TCQPGFFGSDCSTTCSKGKYGESCELSCPCSDAS------CSKQTGKC 617
Query: 93 SCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGT 150
C G +CDQ C+ + + E C + DP G CL C PG +G
Sbjct: 618 LCPLGTKGVSCDQKCDPNTFGFLCQETVTPSPC-------ASTDPKNGVCLSCPPGSSGI 670
Query: 151 RCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQC 188
CE C YG DGC+ C C ++ CDP+ G+C
Sbjct: 671 HCEHNCPAGSYG---DGCQQVCSC----ADGHGCDPTTGEC 704
Score = 156 (60.0 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 40/103 (38%), Positives = 49/103 (47%)
Query: 90 GQCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C C P G C C VG + G GC KSCDC+ G+ CDP G C+C G
Sbjct: 134 GKCECDPGYGGKYCASSCSVGTW----GLGCSKSCDCEN-GA---NCDPELGTCICTSGF 185
Query: 148 TGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQC 188
G RCE C N +G C K C C N +C+ G+C
Sbjct: 186 QGERCEKPCPDNKWG---PNCVKSCPCQ----NGGKCNKEGKC 221
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 65/209 (31%), Positives = 84/209 (40%)
Query: 14 LLCVGPPSDILKSVAGTTGD-C-LKCIYNTGGPQCDT-----------CLPGYFGDALAL 60
L+C P + + G GD C L C ++ GP C+ C P G +
Sbjct: 392 LMCA-PNTGFCRCKPGFYGDNCELACSKDSYGPNCEKQAMCDWNHASECNPET-GSCVCK 449
Query: 61 P--KG-DC-EPCQC--YIPGTL---ETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGH 110
P G +C EPC Y P + CD G+C C G C+ C
Sbjct: 450 PGRTGKNCSEPCPLDFYGPNCAHQCQCNQRGVGCDGADGKCQCDRGWTGHRCEHHCPADT 509
Query: 111 YNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCK 168
+ G C K C C P G CDPITG+C C G+ G C++ C YG GCK
Sbjct: 510 F----GANCEKRCKC-PKGI---GCDPITGECTCPAGLQGANCDIGCPEGSYG---PGCK 558
Query: 169 -PCMCDPIGSNSLQCDP-SGQC---PGVF 192
C C N +CD +G+C PG F
Sbjct: 559 LHCKC----VNG-KCDKETGECTCQPGFF 582
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 55/178 (30%), Positives = 72/178 (40%)
Query: 29 GTTG-DCLKCIYNTGGPQCD----TCL--PGYFGDALALPKGD------C-EPCQCYIPG 74
GT G C K G CD TC+ G+ G+ P D C + C C G
Sbjct: 154 GTWGLGCSKSCDCENGANCDPELGTCICTSGFQGERCEKPCPDNKWGPNCVKSCPCQNGG 213
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNR 132
E G+C C G C ++CE G + G CK C+C G+
Sbjct: 214 KCNKE----------GKCVCSDGWGGEFCLNKCEEGKF----GAECKFECNCQN-GA--- 255
Query: 133 TCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
TCD G+C+C+ G G CE C +G GC CD + N+ CD S G+C
Sbjct: 256 TCDNTNGKCICKSGYHGALCENECSVGFFG---SGCTQ-KCDCL--NNQNCDSSSGEC 307
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 45/163 (27%), Positives = 60/163 (36%)
Query: 32 GDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
G CL C + G C+ C G +GD G + C C G CD TG
Sbjct: 658 GVCLSCPPGSSGIHCEHNCPAGSYGD------GCQQVCSC-ADGH--------GCDPTTG 702
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGCKSC----DCDPVGSLNRTCDPITGQCLCRP 145
+C C+P G C ++C G Y C C CD + L + G RP
Sbjct: 703 ECICEPGYHGKTCSEKCPDGKYGYGCALDCPKCASGSTCDHINGLCICPAGLEGALCTRP 762
Query: 146 ---GVTGTRC-ELCQ-PNHYGFSLDGCKPCMCDPIGSNSLQCD 183
G G C ++C+ + Y C C P G +CD
Sbjct: 763 CSAGFWGNGCRQVCRCTSEYKQCNAQTGECSC-PAGFQGDRCD 804
>UNIPROTKB|A8XMW6 [details] [associations]
symbol:ced-1 "Cell death abnormality protein 1"
species:6238 "Caenorhabditis briggsae" [GO:0001845 "phagolysosome
assembly" evidence=ISS] [GO:0009986 "cell surface" evidence=ISS]
[GO:0012501 "programmed cell death" evidence=ISS] [GO:0031532
"actin cytoskeleton reorganization" evidence=ISS] [GO:0034620
"cellular response to unfolded protein" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=ISS] [GO:0043652
"engulfment of apoptotic cell" evidence=ISS] [GO:0045184
"establishment of protein localization" evidence=ISS]
InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 GO:GO:0016021 GO:GO:0005886
GO:GO:0006915 GO:GO:0009986 GO:GO:0030670 GO:GO:0042742
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0045184 GO:GO:0031532
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0043652 GO:GO:0012501 GO:GO:0034620
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
EMBL:HE600911 ProteinModelPortal:A8XMW6 STRING:A8XMW6
EnsemblMetazoa:CBG15845 WormBase:CBG15845 HOGENOM:HOG000294130
GO:GO:0001845 Pfam:PF12661 Uniprot:A8XMW6
Length = 1134
Score = 183 (69.5 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 57/180 (31%), Positives = 78/180 (43%)
Query: 30 TTGDCLKCIYNTGGPQCDT-CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
T G CL C G C+ C G+FG G + CQC L + CD
Sbjct: 260 TNGKCL-CKSGFHGALCEKPCSEGFFG------AGCTQKCQC-----LNNQD----CDSE 303
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS-CDCDPVG--SLNRTCDPITGQCLCRP 145
TG+C C +G QC++G G CK C C + N +CD TG+C C
Sbjct: 304 TGECKC----IGWTGKQCDIGCARGRFGLQCKQKCTCPGLEFQDSNASCDAKTGECQCES 359
Query: 146 GVTGTRCE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAEMS 199
G G C+ C + YG D K C C + SN++ C P+ G C PG + + E++
Sbjct: 360 GYKGANCDERKCSADTYG--ADCSKQCSC--VMSNTVMCAPNTGFCRCKPGFYGDNCELA 415
Score = 177 (67.4 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 60/187 (32%), Positives = 76/187 (40%)
Query: 21 SDILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGD--ALALPKGDCEPCQCYIPGTLET 78
+D K + + + C NTG C C PG++GD LA K P C +
Sbjct: 378 ADCSKQCSCVMSNTVMCAPNTGF--C-RCKPGFYGDNCELACSKDSYGP-NCEKQAMCDW 433
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDP 136
T D G+C CK G NC Q C + Y G C C+C+ G C
Sbjct: 434 -THASEADPANGKCVCKSGRSGANCSQPCPIDFY----GPNCALQCECNGRGI---GCHG 485
Query: 137 ITGQCLCRPGVTGTRCEL-CQPNHYGFSLD---------GCKP----CMCDPIGSNSLQC 182
G+C C PG TG RCE C +G + + GC P C C P G L+C
Sbjct: 486 FDGKCNCAPGYTGHRCEHHCPALTFGANCEKRCQCPAGVGCNPITGECEC-PAGRQGLKC 544
Query: 183 DPSGQCP 189
D S CP
Sbjct: 545 DIS--CP 549
Score = 176 (67.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 55/172 (31%), Positives = 72/172 (41%)
Query: 33 DCLKCIYNTGGPQCD------TCLPGYFGDALALPKG------DC-EPCQCYIPGTLETE 79
+C KC G CD C G G P G C + C+C T
Sbjct: 732 NCPKC---AAGSSCDHISGQCVCPAGLEGATCTRPCGVGFWGNGCRQVCRC-------TS 781
Query: 80 TFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPI 137
F C+ TG+CSC G CD+ CE G+Y G C K C C G+ +C+ +
Sbjct: 782 EFKQ-CNAQTGECSCPAGFQGDRCDKPCEDGYY----GPDCIKKCKCQ--GTATASCNRV 834
Query: 138 TGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TG C+C PG TG C LC + +G K C D G + +CD + C
Sbjct: 835 TGVCICHPGFTGEFCHALCPESTFGLRCS--KECPKDGCG-DGYECDAAIGC 883
Score = 167 (63.8 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 53/158 (33%), Positives = 69/158 (43%)
Query: 41 TGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
TG +C G D ++ P+G P +C L + CD TG+CSC+P G
Sbjct: 530 TGECECPAGRQGLKCD-ISCPEGSYGP-EC----KLHCKCVNGKCDPETGECSCEPGFGG 583
Query: 101 TNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQP 157
+C C G Y G+ C+ SCDC + C TG+C+C G GT C+ C+
Sbjct: 584 ADCSTSCPKGKY----GDACELSCDCS-----DSYCSRQTGKCICPLGKKGTLCDQPCEA 634
Query: 158 NHYGFSLD-GCKPCMC---DPIGSNSLQCDP--SG-QC 188
N YG P C DP L C P SG QC
Sbjct: 635 NTYGPQCQLTTTPSQCASTDPRNGVCLTCPPGSSGHQC 672
Score = 164 (62.8 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 54/154 (35%), Positives = 67/154 (43%)
Query: 45 QCDTCLPGYFGDAL-----ALPKG-DCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
+C+ C PGY G AL G +CE CQC P + C+ +TG+C C
Sbjct: 489 KCN-CAPGYTGHRCEHHCPALTFGANCEKRCQC--PAGVG-------CNPITGECECPAG 538
Query: 98 VVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL- 154
G CD C G Y G CK C C +N CDP TG+C C PG G C
Sbjct: 539 RQGLKCDISCPEGSY----GPECKLHCKC-----VNGKCDPETGECSCEPGFGGADCSTS 589
Query: 155 CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C YG D C+ CD S+S +G+C
Sbjct: 590 CPKGKYG---DACE-LSCDC--SDSYCSRQTGKC 617
Score = 157 (60.3 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 51/139 (36%), Positives = 61/139 (43%)
Query: 62 KGD-CE-PCQCYIPGTLETETFTPV-C---DQLTGQC-SCKPHVVGTNCDQ-CEVGHYNI 113
KG C+ PC+ G T TP C D G C +C P G C+Q C G Y
Sbjct: 624 KGTLCDQPCEANTYGPQCQLTTTPSQCASTDPRNGVCLTCPPGSSGHQCEQNCPQGTY-- 681
Query: 114 ISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGFSL-DGCKPC 170
G C S C C G CDP TG+C+C PG G C E C +G++ C C
Sbjct: 682 --GTDCASKCACADGG---HGCDPTTGECICEPGYHGATCSEKCPDGKFGYACAQNCPKC 736
Query: 171 MCDPIGSNSLQCDP-SGQC 188
GS+ CD SGQC
Sbjct: 737 AA---GSS---CDHISGQC 749
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 51/166 (30%), Positives = 70/166 (42%)
Query: 32 GDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQLT 89
G C+ C GG C + C G FG DC+ C C T CD
Sbjct: 219 GKCV-CTDGWGGEYCLNKCEEGKFG-------ADCKFECTCQNGAT---------CDNTN 261
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C CK G C++ C G + G GC + C C N+ CD TG+C C G
Sbjct: 262 GKCLCKSGFHGALCEKPCSEGFF----GAGCTQKCQC----LNNQDCDSETGECKCI-GW 312
Query: 148 TGTRCEL-CQPNHYGFSLDGCKP-CMCDPIG--SNSLQCDP-SGQC 188
TG +C++ C +G CK C C + ++ CD +G+C
Sbjct: 313 TGKQCDIGCARGRFGLQ---CKQKCTCPGLEFQDSNASCDAKTGEC 355
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 58/178 (32%), Positives = 75/178 (42%)
Query: 31 TGDCLKCIYNTGGPQCDTCLP-GYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL 88
TG+C C GG C T P G +GDA CE C C ++++ C +
Sbjct: 572 TGEC-SCEPGFGGADCSTSCPKGKYGDA-------CELSCDC-------SDSY---CSRQ 613
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNI---ISGEGCKSCDCDPVGSLNRTCDP-ITG-QCL 142
TG+C C GT CDQ CE Y ++ + DP + TC P +G QC
Sbjct: 614 TGKCICPLGKKGTLCDQPCEANTYGPQCQLTTTPSQCASTDPRNGVCLTCPPGSSGHQCE 673
Query: 143 --CRPGVTGTRC-ELCQPNHYGFSLDGCKP----CMCDPIGSNSLQCDPSGQCP-GVF 192
C G GT C C G GC P C+C+P G + C S +CP G F
Sbjct: 674 QNCPQGTYGTDCASKCACADGGH---GCDPTTGECICEP-GYHGATC--SEKCPDGKF 725
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 61/197 (30%), Positives = 82/197 (41%)
Query: 29 GTTGDCLKCIYNTGGPQCD-TCLPGYF-------GDALALPKGDC-EPCQCYIP-GTLET 78
GT D C NT GPQC T P G L P G C+ P GT T
Sbjct: 625 GTLCD-QPCEANTYGPQCQLTTTPSQCASTDPRNGVCLTCPPGSSGHQCEQNCPQGTYGT 683
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK------SC--DCDPVGSL 130
+ + C G C P G C CE G++ E C +C +C P +
Sbjct: 684 DCASK-CACADGGHGCDP-TTG-ECI-CEPGYHGATCSEKCPDGKFGYACAQNC-PKCAA 738
Query: 131 NRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
+CD I+GQC+C G+ G C +P GF +GC+ C C S QC+ +G+C
Sbjct: 739 GSSCDHISGQCVCPAGLEGATCT--RPCGVGFWGNGCRQVCRCT---SEFKQCNAQTGEC 793
Query: 189 --PGVFM-NRAEMSSDD 202
P F +R + +D
Sbjct: 794 SCPAGFQGDRCDKPCED 810
Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 37/103 (35%), Positives = 48/103 (46%)
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C C P G C C +G + G GC K CDC+ G+ CDP G C+C G
Sbjct: 134 GKCECDPGFGGKICSSSCSIGTW----GLGCSKKCDCEN-GA---NCDPELGDCICPSGF 185
Query: 148 TGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDPSGQC 188
G RCE C + +G C K C C N +C+ G+C
Sbjct: 186 QGKRCEEECPIDKWG---PNCVKSCPCQ----NGGKCNHEGKC 221
>RGD|621787 [details] [associations]
symbol:Celsr3 "cadherin, EGF LAG seven-pass G-type receptor 3"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=ISO]
[GO:0042384 "cilium assembly" evidence=ISO] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 RGD:621787 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 CTD:1951 KO:K04602
OrthoDB:EOG4C87RG EMBL:AB011528 IPI:IPI00207551 RefSeq:NP_112610.1
UniGene:Rn.14558 ProteinModelPortal:O88278 STRING:O88278
PhosphoSite:O88278 PRIDE:O88278 GeneID:83466 KEGG:rno:83466
UCSC:RGD:621787 InParanoid:O88278 NextBio:615859
ArrayExpress:O88278 Genevestigator:O88278
GermOnline:ENSRNOG00000034005 Uniprot:O88278
Length = 3313
Score = 188 (71.2 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 48/142 (33%), Positives = 61/142 (42%)
Query: 37 CIYNTGGPQ---CDTCLPGYFGDALA------LPKGDCEPCQCYIPGTLETET-FTPVCD 86
C + GGP CD C GYFG P+G C P + F P C+
Sbjct: 1987 CRHLQGGPHGYTCD-CASGYFGQHCEHRMDQQCPRGWWGSPTCG-PCNCDVHKGFDPNCN 2044
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+ +GQC CK HY + C CDC PVGS +R+C P +GQC CRPG
Sbjct: 2045 KTSGQCHCKEF------------HYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPG 2092
Query: 147 VTGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2093 ALGRQCNSCDSPFAEVTASGCR 2114
Score = 137 (53.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 47/149 (31%), Positives = 59/149 (39%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD--- 104
TC PGY+G + PCQ G+ P T C C G +C+
Sbjct: 1962 TCWPGYYGPG-CVDACLLNPCQNQ--GSCRHLQGGP--HGYT--CDCASGYFGQHCEHRM 2014
Query: 105 --QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG- 161
QC G + C C+CD + C+ +GQC C+ E HY
Sbjct: 2015 DQQCPRGWWG---SPTCGPCNCDVHKGFDPNCNKTSGQCHCK--------EF----HYRP 2059
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
D C PC C P+GS S C P SGQCP
Sbjct: 2060 RGSDSCLPCDCYPVGSTSRSCAPHSGQCP 2088
Score = 39 (18.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 43 GPQCDTCLPGYFGDAL 58
GP CLPG G L
Sbjct: 223 GPLRRDCLPGSLGSGL 238
>UNIPROTKB|O88278 [details] [associations]
symbol:Celsr3 "Cadherin EGF LAG seven-pass G-type receptor
3" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00181
SMART:SM00303 RGD:621787 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 CTD:1951 KO:K04602
OrthoDB:EOG4C87RG EMBL:AB011528 IPI:IPI00207551 RefSeq:NP_112610.1
UniGene:Rn.14558 ProteinModelPortal:O88278 STRING:O88278
PhosphoSite:O88278 PRIDE:O88278 GeneID:83466 KEGG:rno:83466
UCSC:RGD:621787 InParanoid:O88278 NextBio:615859
ArrayExpress:O88278 Genevestigator:O88278
GermOnline:ENSRNOG00000034005 Uniprot:O88278
Length = 3313
Score = 188 (71.2 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 48/142 (33%), Positives = 61/142 (42%)
Query: 37 CIYNTGGPQ---CDTCLPGYFGDALA------LPKGDCEPCQCYIPGTLETET-FTPVCD 86
C + GGP CD C GYFG P+G C P + F P C+
Sbjct: 1987 CRHLQGGPHGYTCD-CASGYFGQHCEHRMDQQCPRGWWGSPTCG-PCNCDVHKGFDPNCN 2044
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+ +GQC CK HY + C CDC PVGS +R+C P +GQC CRPG
Sbjct: 2045 KTSGQCHCKEF------------HYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPG 2092
Query: 147 VTGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2093 ALGRQCNSCDSPFAEVTASGCR 2114
Score = 137 (53.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 47/149 (31%), Positives = 59/149 (39%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD--- 104
TC PGY+G + PCQ G+ P T C C G +C+
Sbjct: 1962 TCWPGYYGPG-CVDACLLNPCQNQ--GSCRHLQGGP--HGYT--CDCASGYFGQHCEHRM 2014
Query: 105 --QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG- 161
QC G + C C+CD + C+ +GQC C+ E HY
Sbjct: 2015 DQQCPRGWWG---SPTCGPCNCDVHKGFDPNCNKTSGQCHCK--------EF----HYRP 2059
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
D C PC C P+GS S C P SGQCP
Sbjct: 2060 RGSDSCLPCDCYPVGSTSRSCAPHSGQCP 2088
Score = 39 (18.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 43 GPQCDTCLPGYFGDAL 58
GP CLPG G L
Sbjct: 223 GPLRRDCLPGSLGSGL 238
>UNIPROTKB|H7C557 [details] [associations]
symbol:MEGF6 "Multiple epidermal growth factor-like domains
protein 6" species:9606 "Homo sapiens" [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
EMBL:AL512413 Pfam:PF12661 EMBL:AL513320 HGNC:HGNC:3232
ProteinModelPortal:H7C557 Ensembl:ENST00000485002 Uniprot:H7C557
Length = 1156
Score = 181 (68.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 54/160 (33%), Positives = 69/160 (43%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
+C TG C CLPG+ G P G P C + + C TG CS
Sbjct: 634 RCDPETGA--C-LCLPGFVGSRCQDVCPAGWYGP-SCQTRCSCANDGH---CHPATGHCS 686
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P G +C + C+ GH+ G C C+C G + +CD I+G CLC G G R
Sbjct: 687 CAPGWTGFSCQRACDTGHW----GPDCSHPCNCS-AG--HGSCDAISGLCLCEAGYVGPR 739
Query: 152 CEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
CE C H+G GC+ C C + CD SG C
Sbjct: 740 CEQQCPQGHFG---PGCEQRCQCQ----HGAACDHVSGAC 772
Score = 180 (68.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 57/163 (34%), Positives = 70/163 (42%)
Query: 33 DCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQLTG 90
D C G C +TC P FG +C C C GT CD +TG
Sbjct: 378 DGCDCPEGWTGLICNETCPPDTFGK-------NCSFSCSCQNGGT---------CDSVTG 421
Query: 91 QCSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C C P V GTNC D C G+Y G+ C K C+C G C + G CLC PG+
Sbjct: 422 ACRCPPGVSGTNCEDGCPKGYY----GKHCRKKCNCANRGR----CHRLYGACLCDPGLY 473
Query: 149 GTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
G C L C P +G GC + C C + ++ CD G C
Sbjct: 474 GRFCHLTCPPWAFG---PGCSEECQC--VQPHTQSCDKRDGSC 511
Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 41/108 (37%), Positives = 52/108 (48%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
C +TGQC C P G +C+ C G + G GC+ C P CDP TG CLC
Sbjct: 591 CHGVTGQCRCPPGRTGEDCEADCPEGRW----GLGCQEI-C-PACQHAARCDPETGACLC 644
Query: 144 RPGVTGTRCE-LCQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQC 188
PG G+RC+ +C YG S C+ C C +N C P+ G C
Sbjct: 645 LPGFVGSRCQDVCPAGWYGPS---CQTRCSC----ANDGHCHPATGHC 685
Score = 150 (57.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/162 (32%), Positives = 64/162 (39%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTGQ 91
C + +G C G F + A P G DC C C T CD + G
Sbjct: 765 CDHVSGACTCPAGWRGTFCEH-ACPAGFFGLDCRSACNC---------TAGAACDAVNGS 814
Query: 92 CSCKPHVVGTNC-DQCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C C G C + C Y G C ++C C S CDP+ GQC C PG G
Sbjct: 815 CLCPAGRRGPRCAETCPAHTY----GHNCSQACACFNGAS----CDPVHGQCHCAPGWMG 866
Query: 150 TRC-ELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C + C YG D C+ C+C G+ CDP SG C
Sbjct: 867 PSCLQACPAGLYG---DNCRHSCLCQNGGT----CDPVSGHC 901
Score = 145 (56.1 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 53/174 (30%), Positives = 71/174 (40%)
Query: 33 DC-LKCIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLET 78
+C C GG CD+ C PG G PKG C + C C G
Sbjct: 403 NCSFSCSCQNGGT-CDSVTGACRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGR--- 458
Query: 79 ETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPI 137
C +L G C C P + G C C + G GC +C V ++CD
Sbjct: 459 ------CHRLYGACLCDPGLYGRFCHLTCPPWAF----GPGCSE-ECQCVQPHTQSCDKR 507
Query: 138 TGQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
G C C+ G G RC+ C+ ++G GC + C C P+G + CD SG+C
Sbjct: 508 DGSCSCKAGFRGERCQAECELGYFG---PGCWQACTC-PVG---VACDSVSGEC 554
Score = 138 (53.6 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 51/164 (31%), Positives = 72/164 (43%)
Query: 45 QCDTCLPGYFGDAL--ALPKG----DCE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
QC C PG+ G + A P G +C C C GT CD ++G C+C
Sbjct: 857 QCH-CAPGWMGPSCLQACPAGLYGDNCRHSCLCQNGGT---------CDPVSGHCACPEG 906
Query: 98 VVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNR-TCDPITGQCLCRPGVTGTRCEL-C 155
G C++ E ++ +G C+ G LN CDP TG+CLC G TG +C+ C
Sbjct: 907 WAGLACEK-ECLPRDVRAG--CRHSG----GCLNGGLCDPHTGRCLCPAGWTGDKCQSPC 959
Query: 156 QPNHYGFSLDGCKPCMC---DP--IGSNSLQCDPSGQ-CPGVFM 193
+G +G C C P + + + C P + PGV M
Sbjct: 960 AKGTFGPHCEG--RCACRWGGPCHLATGACLCPPGWRGAPGVRM 1001
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 52/176 (29%), Positives = 70/176 (39%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
TG CL C+ G +C D C G++G + C+ C C G C
Sbjct: 639 TGACL-CLPGFVGSRCQDVCPAGWYGPS-------CQTRCSCANDGH---------CHPA 681
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCD-----CDPVGSLNRTCDP--ITGQ 140
TG CSC P G +C + C+ GH+ C +C CD + L C+ + +
Sbjct: 682 TGHCSCAPGWTGFSCQRACDTGHWGPDCSHPC-NCSAGHGSCDAISGLC-LCEAGYVGPR 739
Query: 141 C--LCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
C C G G CE CQ H G + D C C P G C+ + CP F
Sbjct: 740 CEQQCPQGHFGPGCEQRCQCQH-GAACDHVSGACTC-PAGWRGTFCEHA--CPAGF 791
>UNIPROTKB|Q9NYQ6 [details] [associations]
symbol:CELSR1 "Cadherin EGF LAG seven-pass G-type receptor
1" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007266 "Rho protein signal
transduction" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=IEA] [GO:0042060 "wound
healing" evidence=IEA] [GO:0042249 "establishment of planar
polarity of embryonic epithelium" evidence=IEA] [GO:0042472 "inner
ear morphogenesis" evidence=IEA] [GO:0045176 "apical protein
localization" evidence=IEA] [GO:0048105 "establishment of body hair
planar orientation" evidence=IEA] [GO:0060488 "orthogonal
dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060489 "planar
dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060490 "lateral
sprouting involved in lung morphogenesis" evidence=IEA] [GO:0090179
"planar cell polarity pathway involved in neural tube closure"
evidence=IEA] [GO:0090251 "protein localization involved in
establishment of planar polarity" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007417
"central nervous system development" evidence=NAS;TAS] [GO:0004930
"G-protein coupled receptor activity" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0046983
"protein dimerization activity" evidence=NAS] [GO:0001736
"establishment of planar polarity" evidence=ISS] [GO:0001843
"neural tube closure" evidence=ISS] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0001764 GO:GO:0005887 GO:GO:0009952
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 GO:GO:0007626
GO:GO:0007417 GO:GO:0046983 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 PROSITE:PS01186
GO:GO:0007266 GO:GO:0001843 eggNOG:NOG12793 GO:GO:0042060
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0032956 GO:GO:0001736 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 MIM:182940
Gene3D:2.60.40.60 GO:GO:0045176 Pfam:PF02210 EMBL:AF231024
EMBL:AL031588 EMBL:AL031597 EMBL:AL021392 EMBL:BC000059
IPI:IPI00003384 IPI:IPI00874160 RefSeq:NP_055061.1
UniGene:Hs.252387 ProteinModelPortal:Q9NYQ6 SMR:Q9NYQ6
IntAct:Q9NYQ6 MINT:MINT-1413345 STRING:Q9NYQ6 PhosphoSite:Q9NYQ6
DMDM:22095551 PaxDb:Q9NYQ6 PRIDE:Q9NYQ6 Ensembl:ENST00000262738
GeneID:9620 KEGG:hsa:9620 UCSC:uc003bhw.1 CTD:9620
GeneCards:GC22M046755 HGNC:HGNC:1850 MIM:604523 neXtProt:NX_Q9NYQ6
PharmGKB:PA26393 HOGENOM:HOG000231346 HOVERGEN:HBG050887 KO:K04600
OMA:NKPNIGH OrthoDB:EOG4KKZ23 ChiTaRS:CELSR1 GenomeRNAi:9620
NextBio:36101 ArrayExpress:Q9NYQ6 Bgee:Q9NYQ6 CleanEx:HS_CELSR1
Genevestigator:Q9NYQ6 GermOnline:ENSG00000075275 GO:GO:0048105
GO:GO:0042249 GO:GO:0060490 GO:GO:0060488 GO:GO:0090179
GO:GO:0060489 GO:GO:0090251 Uniprot:Q9NYQ6
Length = 3014
Score = 184 (69.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 45/141 (31%), Positives = 66/141 (46%)
Query: 37 CIYNTGGPQ---CDTCLPGYFGDA------LALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
C+ + G PQ C+ C P ++G L P+G C ++ F P C++
Sbjct: 1922 CVRSPGSPQGYVCE-CGPSHYGPYCENKLDLPCPRGWWGNPVCGPCHCAVSKGFDPDCNK 1980
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC CK + +Y +++ + C CDC P GS +RTCD TGQC C+PGV
Sbjct: 1981 TNGQCQCKEN------------YYKLLAQDTCLPCDCFPHGSHSRTCDMATGQCACKPGV 2028
Query: 148 TGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2029 IGRQCNRCDNPFAEVTTLGCE 2049
>ZFIN|ZDB-GENE-060503-252 [details] [associations]
symbol:megf11 "multiple EGF-like-domains 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR007527
InterPro:IPR011489 PROSITE:PS50026 PROSITE:PS50966 PROSITE:PS51041
SMART:SM00181 ZFIN:ZDB-GENE-060503-252 GO:GO:0008270
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
InterPro:IPR006212 InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:BX890618
EMBL:BX908395 EMBL:CR788229 IPI:IPI00785724
Ensembl:ENSDART00000090855 Uniprot:F1Q4V3
Length = 1114
Score = 179 (68.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 45/126 (35%), Positives = 60/126 (47%)
Query: 32 GDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPVCDQLT 89
G+C +C G C C G++G DC E C+C CD +T
Sbjct: 729 GEC-RCSLGWTGLYCTQRCPSGFYGR-------DCAEVCRCQNGAD---------CDHIT 771
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC+C+ +GTNC+Q C G + G GC+ C+C N TCD +TG C C PG
Sbjct: 772 GQCACRTGFIGTNCEQKCPPGTF----GYGCQQLCEC----MNNATCDYVTGTCYCSPGY 823
Query: 148 TGTRCE 153
G RC+
Sbjct: 824 KGIRCD 829
Score = 174 (66.3 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 53/164 (32%), Positives = 66/164 (40%)
Query: 33 DC---LKCIYNTGGPQCDTCLPGYFGDALALPKGDCEP-CQCYIPGTLETETFTPVCDQL 88
DC KC + G CDT G+ P G C Y P T T + C L
Sbjct: 325 DCQNGAKCYHINGACLCDTGFKGHHCQDRFCPPGLYGLICDKYCPCN-STNTIS--CHPL 381
Query: 89 TGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPG 146
TG+CSC G C++ C G+Y GEGC C C + C +TG C+C PG
Sbjct: 382 TGECSCTAGWTGLYCNETCPPGYY----GEGCGVPCQC----ANGADCHSLTGACICAPG 433
Query: 147 VTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
TG C + C +G + C C N C P G C
Sbjct: 434 YTGDDCSQTCPSGLFGTNCTSI--CHCH----NQASCSPIDGSC 471
Score = 168 (64.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 52/135 (38%), Positives = 58/135 (42%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKGD----CEP-CQCYIPGTLETETFTPVCDQLT 89
C + TG +C C PGY G P G CE C C GT C +T
Sbjct: 203 CHHETG--EC-ICAPGYMGPICGERCPSGSHGPQCEQRCPCQNGGT---------CHHIT 250
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+CSC G+ C Q C G Y I C K C C G L CD ITGQC C G
Sbjct: 251 GECSCPAGWTGSVCAQPCPFGKYGI----NCSKECSCRN-GGL---CDHITGQCQCMAGY 302
Query: 148 TGTRC-ELCQPNHYG 161
+G RC E C YG
Sbjct: 303 SGHRCQEECPVGTYG 317
Score = 161 (61.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/147 (34%), Positives = 65/147 (44%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQL 88
TG C+ C G +C D C PGY+G KG C+ CQC T C
Sbjct: 164 TGACV-CTDGYQGWRCEDLCEPGYYG------KG-CQLQCQCLNGAT---------CHHE 206
Query: 89 TGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPG 146
TG+C C P +G C ++C G + G C+ C C G TC ITG+C C G
Sbjct: 207 TGECICAPGYMGPICGERCPSGSH----GPQCEQRCPCQNGG----TCHHITGECSCPAG 258
Query: 147 VTGTRC-ELCQPNHYGFSLDGCKPCMC 172
TG+ C + C YG + K C C
Sbjct: 259 WTGSVCAQPCPFGKYGINCS--KECSC 283
Score = 160 (61.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 54/171 (31%), Positives = 71/171 (41%)
Query: 34 CLKCIYNTGG-----PQCDTCLPGYFGDAL--ALPKGD----C-EPCQCYIPGTLETETF 81
C +C+++TG C+ CL G+FG P G C E C C GT
Sbjct: 628 CPQCVHSTGPCHHVTGHCE-CLAGFFGSLCNQVCPSGKFGKACAEICLCTNNGT------ 680
Query: 82 TPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITG 139
C+ + G C C P G +C Q C +G + G C SC+C G+ C G
Sbjct: 681 ---CNPIDGSCQCFPGWTGDDCSQICPIGQW----GPDCLNSCNCHN-GA---QCSAYDG 729
Query: 140 QCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
+C C G TG C + C YG D + C C N CD +GQC
Sbjct: 730 ECRCSLGWTGLYCTQRCPSGFYG--RDCAEVCRCQ----NGADCDHITGQC 774
Score = 157 (60.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 53/169 (31%), Positives = 71/169 (42%)
Query: 33 DC-LKCIYNTGG---PQCDTCL--PGYFGDALA--LPKGDC-EPCQCYIPGTLETETFTP 83
+C + C GG P+ TC+ PGY G + P G C P + + T
Sbjct: 580 NCSMTCSCQNGGSCSPEDGTCVCAPGYRGTSCKRICPPGFYGHRCSQLCPQCVHS---TG 636
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
C +TG C C G+ C+Q C G + G+ C C C + N TC+PI G C
Sbjct: 637 PCHHVTGHCECLAGFFGSLCNQVCPSGKF----GKACAEICLC----TNNGTCNPIDGSC 688
Query: 142 LCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C PG TG C ++C +G D C C N QC G+C
Sbjct: 689 QCFPGWTGDDCSQICPIGQWG--PDCLNSCNCH----NGAQCSAYDGEC 731
Score = 155 (59.6 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 39/102 (38%), Positives = 52/102 (50%)
Query: 92 CSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C C+P G +C CE G++ G C + C C G+L C+PITG C+C G G
Sbjct: 124 CQCEPGWGGLDCSSGCESGYW----GPHCSNRCQCKN-GAL---CNPITGACVCTDGYQG 175
Query: 150 TRCE-LCQPNHYGFSLDGCK-PCMCDPIGSNSLQCD-PSGQC 188
RCE LC+P +YG GC+ C C N C +G+C
Sbjct: 176 WRCEDLCEPGYYG---KGCQLQCQC----LNGATCHHETGEC 210
Score = 141 (54.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 34/91 (37%), Positives = 44/91 (48%)
Query: 84 VCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLN-RTCDPITGQ 140
+C+ +TG C C G C D CE G+Y G+GC+ C C LN TC TG+
Sbjct: 159 LCNPITGACVCTDGYQGWRCEDLCEPGYY----GKGCQLQCQC-----LNGATCHHETGE 209
Query: 141 CLCRPGVTGTRC-ELCQPNHYGFSLDGCKPC 170
C+C PG G C E C +G + PC
Sbjct: 210 CICAPGYMGPICGERCPSGSHGPQCEQRCPC 240
Score = 141 (54.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 38/109 (34%), Positives = 49/109 (44%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCL 142
+CD +TGQC C G C + E G C CDC G+ C I G CL
Sbjct: 288 LCDHITGQCQCMAGYSGHRCQE-ECPVGTY--GPQCTLHCDCQN-GA---KCYHINGACL 340
Query: 143 CRPGVTGTRCE--LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C G G C+ C P YG D K C C+ +N++ C P +G+C
Sbjct: 341 CDTGFKGHHCQDRFCPPGLYGLICD--KYCPCN--STNTISCHPLTGEC 385
Score = 139 (54.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 37/107 (34%), Positives = 45/107 (42%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLC 143
CD + G C+C G C Q C G Y + E + CDC+ CD ++G C C
Sbjct: 507 CDPIDGSCTCSSGWRGERCQQPCPDGTYEL---ECRERCDCNHADG----CDHVSGLCRC 559
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
PG TG C+ P GF C C C GS C P G C
Sbjct: 560 LPGWTGIHCDSICPQ--GFWGSNCSMTCSCQNGGS----CSPEDGTC 600
Score = 131 (51.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 47/151 (31%), Positives = 62/151 (41%)
Query: 49 CLPGYFGD--ALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGT 101
C PGY GD + P G +C C C+ + C + G C CK G
Sbjct: 430 CAPGYTGDDCSQTCPSGLFGTNCTSICHCHNQAS---------CSPIDGSCICKEGWQGV 480
Query: 102 NCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
+C C G + G GC ++C C + CDPI G C C G G RC+ QP
Sbjct: 481 DCSILCSSGTW----GLGCNQTCLC----ANGAACDPIDGSCTCSSGWRGERCQ--QPCP 530
Query: 160 YG-FSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G + L+ + C C+ CD SG C
Sbjct: 531 DGTYELECRERCDCNHADG----CDHVSGLC 557
Score = 130 (50.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 44/162 (27%), Positives = 67/162 (41%)
Query: 31 TGDCLKCIYNTGGPQCDTCLP-GYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
+G C +C+ G CD+ P G++G ++ C C G+ C
Sbjct: 554 SGLC-RCLPGWTGIHCDSICPQGFWGSNCSMT------CSCQNGGS---------CSPED 597
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G C C P GT+C + C G Y + C C V S C +TG C C G
Sbjct: 598 GTCVCAPGYRGTSCKRICPPGFYGHRCSQLCPQC----VHSTG-PCHHVTGHCECLAGFF 652
Query: 149 GTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+ C ++C +G + + C+C +N+ C+P G C
Sbjct: 653 GSLCNQVCPSGKFGKAC--AEICLC----TNNGTCNPIDGSC 688
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 50/167 (29%), Positives = 61/167 (36%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+C C G C +TC PGY+G+ +P CQC G C LT
Sbjct: 382 TGEC-SCTAGWTGLYCNETCPPGYYGEGCGVP------CQC-ANGA--------DCHSLT 425
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHY--NIISGEGCKS-CDCDPV-GSL--NRTCDPITGQCL 142
G C C P G +C Q C G + N S C + C P+ GS + L
Sbjct: 426 GACICAPGYTGDDCSQTCPSGLFGTNCTSICHCHNQASCSPIDGSCICKEGWQGVDCSIL 485
Query: 143 CRPGVTGTRCE---LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSG 186
C G G C LC +DG C G Q P G
Sbjct: 486 CSSGTWGLGCNQTCLCANGAACDPIDGSCTCSSGWRGERCQQPCPDG 532
>ZFIN|ZDB-GENE-080506-1 [details] [associations]
symbol:megf10 "multiple EGF-like-domains 10"
species:7955 "Danio rerio" [GO:0030239 "myofibril assembly"
evidence=IMP] InterPro:IPR000742 InterPro:IPR011489 PROSITE:PS50026
PROSITE:PS51041 SMART:SM00181 ZFIN:ZDB-GENE-080506-1
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030239 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS50027
Pfam:PF12661 GeneTree:ENSGT00690000101691 EMBL:CR396586
IPI:IPI00512925 Ensembl:ENSDART00000043936 Uniprot:E9QJQ6
Length = 1119
Score = 178 (67.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 61/164 (37%), Positives = 72/164 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFG---DALALP--KGD-CEP-CQCYIPGTLETETFTPVCDQLT 89
C + TG +C C PGY G + L P G CE C C G VC +T
Sbjct: 200 CHHITG--EC-VCSPGYTGAFCEDLCPPGKHGQQCEERCPCQNGG---------VCHHVT 247
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+CSC P G C Q C G + G+ C + C C G C P TGQC+C G
Sbjct: 248 GECSC-PAGWGMVCGQPCPTGRF----GKNCSQECQCHNGG----ICSPSTGQCVCSSGY 298
Query: 148 TGTRCE-LCQPNHYGFSLDGC-KPCMCDPIGSNSLQC-DPSGQC 188
TG RC+ CQ YG GC + C C N QC SG C
Sbjct: 299 TGERCQDQCQVGTYGI---GCSQACRC----VNGAQCYHVSGAC 335
Score = 167 (63.8 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 62/189 (32%), Positives = 82/189 (43%)
Query: 29 GTTG-DCLKCIYNTGGPQC----DTCL--PGYFGDALA---LPKGD----CE-PCQCYIP 73
GT G C + G QC CL GY G++ P G C+ C C
Sbjct: 310 GTYGIGCSQACRCVNGAQCYHVSGACLCEQGYTGESCEERICPDGQYGLKCDRKCPC--- 366
Query: 74 GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLN 131
T T + C ++G+CSC+ G C++ C G Y GE C+ C C G+
Sbjct: 367 NTNNTRS----CHPMSGECSCQSGWSGLYCNETCAPGFY----GEACQEVCRCQN-GA-- 415
Query: 132 RTCDPITGQCLCRPGVTGTRCEL-CQPNHYGF---SLDGCKP-CMCDPI-GSNSLQC--- 182
C ++G+C+C PG G+ C + C P YG SL CK +C PI GS S Q
Sbjct: 416 -DCHSVSGECICAPGYKGSDCAIACPPGTYGINCTSLCSCKNGAICSPIDGSCSCQAGWH 474
Query: 183 --DPSGQCP 189
D S CP
Sbjct: 475 GVDCSINCP 483
Score = 163 (62.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 46/140 (32%), Positives = 60/140 (42%)
Query: 36 KCIYNTG-GPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
KC++ P C PG+ G D + D C + E +C+ +TG C
Sbjct: 109 KCVHGRCVAPNTCQCEPGWGGADCSSACDRDHWGPHCSSRCQCKNEA---LCNPITGACI 165
Query: 94 CKPHVVGTNC-DQCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P G C D C+ Y G C+ C C N TC ITG+C+C PG TG
Sbjct: 166 CAPGYHGWRCEDLCDHSTY----GNNCQQKCLCQN----NATCHHITGECVCSPGYTGAF 217
Query: 152 CE-LCQPNHYGFSLDGCKPC 170
CE LC P +G + PC
Sbjct: 218 CEDLCPPGKHGQQCEERCPC 237
Score = 159 (61.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
C+ ++GQC+C+ +G +C+ +C G Y G GC+ CDC N TCD +TG C
Sbjct: 763 CNHISGQCTCRTGFMGRHCETKCPAGSY----GYGCRQVCDC----LNNSTCDHMTGTCY 814
Query: 143 CRPGVTGTRCE 153
C PG GTRC+
Sbjct: 815 CNPGWKGTRCD 825
Score = 157 (60.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 53/155 (34%), Positives = 69/155 (44%)
Query: 45 QCDTCLPGYFGD--ALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTGQCSCKPH 97
+C C PGY G A+A P G +C C C G +C + G CSC+
Sbjct: 423 EC-ICAPGYKGSDCAIACPPGTYGINCTSLCSCK-NGA--------ICSPIDGSCSCQAG 472
Query: 98 VVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL- 154
G +C C G + G GC SC C G+ C+ + G+C C PG G RC+
Sbjct: 473 WHGVDCSINCPSGTW----GLGCNLSCVCGNGGA----CNALDGKCTCTPGWRGDRCDQH 524
Query: 155 CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
CQ YG LD + C C S++ C PS G C
Sbjct: 525 CQDGTYG--LDCRERCDC----SHADGCHPSTGHC 553
Score = 155 (59.6 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 57/180 (31%), Positives = 70/180 (38%)
Query: 28 AGTTG-DC-LKCIYNTGGPQCD------TCLPGYFGDALA--LPKG----DC-EPCQCYI 72
+GT G C L C+ GG C+ TC PG+ GD G DC E C C
Sbjct: 484 SGTWGLGCNLSCVCGNGGA-CNALDGKCTCTPGWRGDRCDQHCQDGTYGLDCRERCDC-- 540
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSL 130
+ C TG C C G +CD C G + G C SC+C S
Sbjct: 541 -------SHADGCHPSTGHCRCLAGWTGIHCDSVCAEGRW----GPNCSLSCNCKNSAS- 588
Query: 131 NRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLD-GCKPCMCDPIGSNSLQCDPSGQC 188
C P G C C PG GT C+ +C P +G C C + SN +GQC
Sbjct: 589 ---CSPDEGACECAPGFRGTTCQHICSPGVFGHRCSQACPHC----VHSNGPCHHVTGQC 641
Score = 154 (59.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/159 (33%), Positives = 69/159 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA---LPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C + TG QC+ CLPG+ G AL P G C G T T C + G C
Sbjct: 634 CHHVTG--QCE-CLPGFKG-ALCNEVCPSGKFGK-NC---GGSCTCTNNGTCSPMDGSCQ 685
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P +G++C Q C G + G C +C+C G+ C G+C C G TG
Sbjct: 686 CYPGWIGSDCSQPCPPGQW----GPNCIHTCNCHN-GAF---CSAYDGECKCTAGWTGLY 737
Query: 152 C-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
C + C YG D + C C+ N C+ SGQC
Sbjct: 738 CTQRCPLGFYG--KDCVQACQCE----NGADCNHISGQC 770
Score = 143 (55.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 46/151 (30%), Positives = 62/151 (41%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PG+ G + P C P + + P C +TGQC C P G
Sbjct: 596 CE-CAPGFRGTTCQHICSPGVFGHRCSQACPHCVHSNG--P-CHHVTGQCECLPGFKGAL 651
Query: 103 CDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G + G+ C SC C + N TC P+ G C C PG G+ C + C P
Sbjct: 652 CNEVCPSGKF----GKNCGGSCTC----TNNGTCSPMDGSCQCYPGWIGSDCSQPCPPGQ 703
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 704 WG---PNCIHTCNCH----NGAFCSAYDGEC 727
>UNIPROTKB|Q96KG7 [details] [associations]
symbol:MEGF10 "Multiple epidermal growth factor-like
domains protein 10" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043654 "recognition of apoptotic cell"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0048641
"regulation of skeletal muscle tissue development" evidence=IMP]
[GO:0014719 "satellite cell activation" evidence=ISS] [GO:0014841
"satellite cell proliferation" evidence=ISS] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IDA] [GO:0051147 "regulation of muscle
cell differentiation" evidence=IMP] [GO:0014816 "satellite cell
differentiation" evidence=IMP] [GO:0055001 "muscle cell
development" evidence=IMP] InterPro:IPR000742 InterPro:IPR011489
PROSITE:PS50026 PROSITE:PS51041 SMART:SM00181 GO:GO:0016021
EMBL:CH471062 GO:GO:0016323 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042995 GO:GO:0001891 GO:GO:0048641 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 HOGENOM:HOG000294130
Pfam:PF12661 GO:GO:0043654 HSSP:P01132 GO:GO:0051147 EMBL:AB058676
EMBL:CR749437 EMBL:BC020198 EMBL:BC152478 IPI:IPI00064607
IPI:IPI00873983 RefSeq:NP_001243474.1 RefSeq:NP_115822.1
UniGene:Hs.438709 ProteinModelPortal:Q96KG7 SMR:Q96KG7
IntAct:Q96KG7 STRING:Q96KG7 PhosphoSite:Q96KG7 DMDM:74716908
PaxDb:Q96KG7 PRIDE:Q96KG7 Ensembl:ENST00000274473
Ensembl:ENST00000418761 Ensembl:ENST00000503335
Ensembl:ENST00000508365 GeneID:84466 KEGG:hsa:84466 UCSC:uc003kuh.4
UCSC:uc010jdc.1 CTD:84466 GeneCards:GC05P126654 HGNC:HGNC:29634
HPA:HPA026876 MIM:612453 MIM:614399 neXtProt:NX_Q96KG7
Orphanet:98920 PharmGKB:PA144596410 HOVERGEN:HBG108333
InParanoid:Q96KG7 OMA:FGCNLTC PhylomeDB:Q96KG7 GenomeRNAi:84466
NextBio:74274 Bgee:Q96KG7 CleanEx:HS_MEGF10 Genevestigator:Q96KG7
GO:GO:0014719 GO:GO:0014841 Uniprot:Q96KG7
Length = 1140
Score = 178 (67.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 49/159 (30%), Positives = 70/159 (44%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKG----DCEP-CQCYIPGTLETETFTPVCDQLTG 90
KC + +G C+ G +A P+G C+ C C++ T C ++G
Sbjct: 331 KCYHVSGACLCEAGFAGERCEARLCPEGLYGIKCDKRCPCHLENTHS-------CHPMSG 383
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVT 148
+C+CKP G C++ C G Y GE C+ C C G+ CD +TG+C C PG
Sbjct: 384 ECACKPGWSGLYCNETCSPGFY----GEACQQICSCQN-GA---DCDSVTGKCTCAPGFK 435
Query: 149 GTRCEL-CQPNHYGFSLD---GCK-PCMCDPIGSNSLQC 182
G C C YG + GCK +C P+ S C
Sbjct: 436 GIDCSTPCPLGTYGINCSSRCGCKNDAVCSPV-DGSCTC 473
Score = 175 (66.7 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 63/178 (35%), Positives = 74/178 (41%)
Query: 29 GTTG-DCLKCIYNTGGPQCD------TCLPGYFG---DALALP--KG-DCEP-CQCYIPG 74
GT G DC + G CD C PGY G + L P G CE C C G
Sbjct: 185 GTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGG 244
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNR 132
VC +TG+CSC +GT C Q C G + G+ C + C C G
Sbjct: 245 ---------VCHHVTGECSCPSGWMGTVCGQPCPEGRF----GKNCSQECQCHNGG---- 287
Query: 133 TCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQC-DPSGQC 188
TCD TGQC C PG TG RC+ C YG + C C N +C SG C
Sbjct: 288 TCDAATGQCHCSPGYTGERCQDECPVGTYGVLC--AETCQC----VNGGKCYHVSGAC 339
Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 32/71 (45%), Positives = 41/71 (57%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCL 142
CD ++GQC+C+ +G +C+Q C G Y G GC+ CDC N TCD ITG C
Sbjct: 767 CDHISGQCTCRTGFMGRHCEQKCPSGTY----GYGCRQICDC----LNNSTCDHITGTCY 818
Query: 143 CRPGVTGTRCE 153
C PG G RC+
Sbjct: 819 CSPGWKGARCD 829
Score = 157 (60.3 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 55/172 (31%), Positives = 73/172 (42%)
Query: 34 CLKCIYNTGGPQ-----CDTCLPGYFGDALA---LPKG----DCEP-CQCYIPGTLETET 80
C +C++++G CD CLPG+ G AL P G +C C C GT
Sbjct: 628 CPQCVHSSGPCHHITGLCD-CLPGFTG-ALCNEVCPSGRFGKNCAGICTCTNNGT----- 680
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPIT 138
C+ + C C P +G++C Q C H+ G C +C+C G+ C
Sbjct: 681 ----CNPIDRSCQCYPGWIGSDCSQPCPPAHW----GPNCIHTCNCHN-GAF---CSAYD 728
Query: 139 GQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G+C C PG TG C + C YG D C C N CD SGQC
Sbjct: 729 GECKCTPGWTGLYCTQRCPLGFYG--KDCALICQCQ----NGADCDHISGQC 774
Score = 154 (59.3 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 48/152 (31%), Positives = 60/152 (39%)
Query: 48 TCLPGYFG-D-ALALPKGD----CE-PCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVG 100
TC G+ G D ++ P G C CQC G C+ L G C+C P G
Sbjct: 472 TCKAGWHGVDCSIRCPSGTWGFGCNLTCQCLNGGA---------CNTLDGTCTCAPGWRG 522
Query: 101 TNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPN 158
C+ C+ G Y + E CDC C P TG C C PG +G C+ +C
Sbjct: 523 EKCELPCQDGTYGLNCAE---RCDCSHADG----CHPTTGHCRCLPGWSGVHCDSVCAEG 575
Query: 159 HYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
+G C PC C N C P G C
Sbjct: 576 RWG---PNCSLPCYC----KNGASCSPDDGIC 600
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 61/193 (31%), Positives = 79/193 (40%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCY-IPGTLETETFTP-VCDQLTGQCSC 94
C TG +C TC PG+ G + P C P Y I + VC + G C+C
Sbjct: 421 CDSVTG--KC-TCAPGFKGIDCSTP---C-PLGTYGINCSSRCGCKNDAVCSPVDGSCTC 473
Query: 95 KPHVVGTNCD-QCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTRC 152
K G +C +C G + G GC +C C G+ C+ + G C C PG G +C
Sbjct: 474 KAGWHGVDCSIRCPSGTW----GFGCNLTCQCLNGGA----CNTLDGTCTCAPGWRGEKC 525
Query: 153 EL-CQPNHYGFSL---------DGCKP----CMCDPIGSNSLQCD---------PSGQCP 189
EL CQ YG + DGC P C C P G + + CD P+ P
Sbjct: 526 ELPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLP-GWSGVHCDSVCAEGRWGPNCSLP 584
Query: 190 GVFMNRAEMSSDD 202
N A S DD
Sbjct: 585 CYCKNGASCSPDD 597
Score = 150 (57.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 53/167 (31%), Positives = 65/167 (38%)
Query: 24 LKSVAGTTG-DC-LKCIYNTGGPQCDT------CLPGYFGDALALPKGD------C-EPC 68
++ +GT G C L C GG C+T C PG+ G+ LP D C E C
Sbjct: 484 IRCPSGTWGFGCNLTCQCLNGGA-CNTLDGTCTCAPGWRGEKCELPCQDGTYGLNCAERC 542
Query: 69 QCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDP 126
C + C TG C C P G +CD C G + G C C C
Sbjct: 543 DC---------SHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRW----GPNCSLPCYCKN 589
Query: 127 VGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDG-CKPCM 171
S C P G C C PG GT C+ +C P YG C C+
Sbjct: 590 GAS----CSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCV 632
Score = 145 (56.1 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 49/134 (36%), Positives = 62/134 (46%)
Query: 69 QCYIPGTLET-ETFTPVC-DQLT-GQC------SCKPHVVGTNCDQ-CEVGHYNIISGEG 118
QC PG E+ E P C D+ G+C C+P GTNC C+ H+ G
Sbjct: 93 QC-CPGFYESGEMCVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHW----GPH 147
Query: 119 CKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGC-KPCMCDPI 175
C S C C G+L C+PITG C C G G RCE C+ YG + C + C C
Sbjct: 148 CTSRCQCKN-GAL---CNPITGACHCAAGFRGWRCEDRCEQGTYG---NDCHQRCQCQ-- 198
Query: 176 GSNSLQCDP-SGQC 188
N CD +G+C
Sbjct: 199 --NGATCDHVTGEC 210
Score = 139 (54.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 45/151 (29%), Positives = 61/151 (40%)
Query: 46 CDTCLPGYFGDA---LALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTN 102
C+ C PG+ G + P C P + + P C +TG C C P G
Sbjct: 600 CE-CAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSG--P-CHHITGLCDCLPGFTGAL 655
Query: 103 CDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNH 159
C++ C G + G+ C C C + N TC+PI C C PG G+ C + C P H
Sbjct: 656 CNEVCPSGRF----GKNCAGICTC----TNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAH 707
Query: 160 YGFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
+G C C C N C G+C
Sbjct: 708 WG---PNCIHTCNCH----NGAFCSAYDGEC 731
>MGI|MGI:1858236 [details] [associations]
symbol:Celsr3 "cadherin, EGF LAG seven-pass G-type receptor
3 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IGI] [GO:0042384 "cilium assembly"
evidence=IGI] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR017983
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
MGI:MGI:1858236 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 HOGENOM:HOG000231346
HOVERGEN:HBG050887 CTD:1951 KO:K04602 OMA:DGRRVDM OrthoDB:EOG4C87RG
EMBL:AF427498 EMBL:AC168054 EMBL:AF188752 IPI:IPI00284505
RefSeq:NP_536685.2 UniGene:Mm.39945 ProteinModelPortal:Q91ZI0
IntAct:Q91ZI0 STRING:Q91ZI0 PhosphoSite:Q91ZI0 PaxDb:Q91ZI0
PRIDE:Q91ZI0 Ensembl:ENSMUST00000024238 GeneID:107934
KEGG:mmu:107934 UCSC:uc009rrb.1 InParanoid:Q91ZI0 NextBio:359739
Bgee:Q91ZI0 Genevestigator:Q91ZI0 GermOnline:ENSMUSG00000023473
Uniprot:Q91ZI0
Length = 3301
Score = 183 (69.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 47/142 (33%), Positives = 60/142 (42%)
Query: 37 CIYNTGGPQ---CDTCLPGYFGDALA------LPKGDCEPCQCYIPGTLETET-FTPVCD 86
C + G P CD C+ GYFG P+G C P + F P C+
Sbjct: 1985 CRHLQGAPHGYTCD-CVSGYFGQHCEHRVDQQCPRGWWGSPTCG-PCNCDVHKGFDPNCN 2042
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+ GQC CK HY + C CDC PVGS +R+C P +GQC CRPG
Sbjct: 2043 KTNGQCHCKEF------------HYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPG 2090
Query: 147 VTGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2091 ALGRQCNSCDSPFAEVTASGCR 2112
Score = 137 (53.3 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 47/149 (31%), Positives = 58/149 (38%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD--- 104
TC PGY+G + PCQ G+ P T C C G +C+
Sbjct: 1960 TCRPGYYGPG-CVDACLLNPCQNQ--GSCRHLQGAP--HGYT--CDCVSGYFGQHCEHRV 2012
Query: 105 --QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG- 161
QC G + C C+CD + C+ GQC C+ E HY
Sbjct: 2013 DQQCPRGWWG---SPTCGPCNCDVHKGFDPNCNKTNGQCHCK--------EF----HYRP 2057
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
D C PC C P+GS S C P SGQCP
Sbjct: 2058 RGSDSCLPCDCYPVGSTSRSCAPHSGQCP 2086
Score = 38 (18.4 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 43 GPQCDTCLPGYFGDAL 58
GP CLPG G L
Sbjct: 223 GPFRRDCLPGSLGSGL 238
>UNIPROTKB|D4AA94 [details] [associations]
symbol:Megf6 "Multiple epidermal growth factor-like domains
protein 6" species:10116 "Rattus norvegicus" [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 RGD:621188
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
OrthoDB:EOG4CZBF1 IPI:IPI00776570 ProteinModelPortal:D4AA94
Ensembl:ENSRNOT00000055386 Uniprot:D4AA94
Length = 1193
Score = 178 (67.7 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 61/177 (34%), Positives = 73/177 (41%)
Query: 33 DC-LKCIYNTGGPQCD---TCL--PGY--FGDALALPKGDCEPCQCYIP-GT--LETETF 81
DC +C T G C +C+ P + G+ L P E C P G L +
Sbjct: 621 DCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGEDCGADCPEGRWGLGCQEI 680
Query: 82 TPVCDQ------LTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCK-SCDCDPVGSLNRT 133
P C+ TG C C P VG+ C D C G Y G GC+ C C G
Sbjct: 681 CPACEHGASCNPETGTCLCLPGFVGSRCQDTCSAGWY----GTGCQIRCACANDGH---- 732
Query: 134 CDPITGQCLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
CDP TG+C C PG TG C+ C H+G D PC C N CD SG C
Sbjct: 733 CDPTTGRCSCAPGWTGLSCQRACDSGHWG--PDCIHPCNCSAGHGN---CDAVSGLC 784
Score = 176 (67.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 51/153 (33%), Positives = 74/153 (48%)
Query: 45 QCDT-CLPGYFGDALALPKGDC-EPCQCYIPGTLETETFTPV---CDQLTGQCSCKPHVV 99
+C T C PGY G+ DC + C G + + + V C ++TG+C C P
Sbjct: 608 ECRTQCPPGYQGE-------DCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKT 660
Query: 100 GTNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-LCQP 157
G +C C G + + E C +C+ G+ +C+P TG CLC PG G+RC+ C
Sbjct: 661 GEDCGADCPEGRWGLGCQEICPACEH---GA---SCNPETGTCLCLPGFVGSRCQDTCSA 714
Query: 158 NHYGFSLDGCK-PCMCDPIGSNSLQCDPS-GQC 188
YG GC+ C C +N CDP+ G+C
Sbjct: 715 GWYG---TGCQIRCAC----ANDGHCDPTTGRC 740
Score = 176 (67.0 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 52/163 (31%), Positives = 70/163 (42%)
Query: 34 CLKCIYNTG-GPQCDTCL--PGYFGDALA-LPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
C C + P+ TCL PG+ G C I + CD T
Sbjct: 681 CPACEHGASCNPETGTCLCLPGFVGSRCQDTCSAGWYGTGCQIRCACANDGH---CDPTT 737
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+CSC P G +C + C+ GH+ G C C+C G N CD ++G CLC G
Sbjct: 738 GRCSCAPGWTGLSCQRACDSGHW----GPDCIHPCNCS-AGHGN--CDAVSGLCLCEAGY 790
Query: 148 TGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQC 188
G RCE C+ +YG S + + C C+ + CD SG C
Sbjct: 791 EGPRCEQSCRQGYYGPSCE--QKCRCE----HGAACDHVSGAC 827
Score = 172 (65.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 64/188 (34%), Positives = 77/188 (40%)
Query: 28 AGTTG-DC-LKCIYNTGGPQCDT------CLPGYFGDALA---LP---KGDCE-PCQCYI 72
AG G DC C + G P CD C G +G A LP C+ C C
Sbjct: 844 AGFFGLDCDSACNCSAGAP-CDAVTGSCICPAGRWGPRCAQKCLPGHYAAGCQLNCSCLH 902
Query: 73 PGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSL 130
G +CD+LTG C C G C C G + GE C + C C P
Sbjct: 903 GG---------ICDRLTGHCLCPAGWTGDKCQSSCPRGWF----GEACAQRCLCPP---- 945
Query: 131 NRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDPS-GQ 187
N +C +TG+C C PG TG CE C YG GC+ C C N CDP+ G
Sbjct: 946 NASCHHVTGECRCPPGFTGLSCEQGCPSGRYG---PGCEHICKC----LNGGTCDPATGA 998
Query: 188 C--PGVFM 193
C P F+
Sbjct: 999 CYCPAGFL 1006
Score = 162 (62.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 50/147 (34%), Positives = 65/147 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKG----DCEP-CQCYIPGTLETETFTPVCDQLT 89
C + TG +C C PG+ G + P G CE C+C GT CD T
Sbjct: 949 CHHVTG--EC-RCPPGFTGLSCEQGCPSGRYGPGCEHICKCLNGGT---------CDPAT 996
Query: 90 GQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGV 147
G C C +G +C C G + G C C C G+ CDP++G C+C PG
Sbjct: 997 GACYCPAGFLGADCSLACPQGRF----GPSCAHVCACRQ-GA---ACDPVSGACICSPGK 1048
Query: 148 TGTRCEL-CQPNHYGFSLDGCK-PCMC 172
TG RCE C + +G GC+ C C
Sbjct: 1049 TGVRCEHGCPQDRFG---KGCELKCAC 1072
Score = 154 (59.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/170 (31%), Positives = 69/170 (40%)
Query: 37 CIYNTGGPQCDT------CLPGYFGDAL--ALPKG----DC-EPCQCYIPGTLETETFTP 83
C GG CD C PG G PKG C + C C G
Sbjct: 463 CTCQNGGT-CDPVLGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGR-------- 513
Query: 84 VCDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQC 141
C +L G C C P + G C C + G GC + C C+ S R+C+P G C
Sbjct: 514 -CHRLYGACLCDPGLYGRFCHLACPPWAF----GPGCSEDCLCEQ--SHTRSCNPKDGSC 566
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKP-CMCDPIGSNSLQCDP-SGQC 188
C+ G G RC+ C+ +G GC+ C C P + CDP SG+C
Sbjct: 567 SCKAGFQGERCQAECESGFFG---PGCRHRCTCQP----GVACDPVSGEC 609
Score = 153 (58.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/116 (37%), Positives = 52/116 (44%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQC 141
+C G CSC +G +C+ C G Y G C C C GS C+P TG C
Sbjct: 1077 LCHATNGSCSCPLGWMGPHCEHACPAGRY----GAACLLECFCQNNGS----CEPTTGAC 1128
Query: 142 LCRPGVTGTRCELCQ---PNHY----GFSLDGC-KPCMCDPIGSNSLQCDP-SGQC 188
LC PG G CE C+ P GF GC + C C G+ CDP SGQC
Sbjct: 1129 LCGPGFYGQACEHCEWGCPLPLSCPSGFHGPGCQRVCECQQ-GA---PCDPVSGQC 1180
Score = 150 (57.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 45/132 (34%), Positives = 56/132 (42%)
Query: 30 TTGDCLKCIYNTGGPQCD-TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL 88
T G C C GP C+ C G +G A L C C G+ C+
Sbjct: 1081 TNGSC-SCPLGWMGPHCEHACPAGRYGAACLLE------CFCQNNGS---------CEPT 1124
Query: 89 TGQCSCKPHVVGTNCDQCEVGHYNIIS------GEGCKS-CDCDPVGSLNRTCDPITGQC 141
TG C C P G C+ CE G +S G GC+ C+C G+ CDP++GQC
Sbjct: 1125 TGACLCGPGFYGQACEHCEWGCPLPLSCPSGFHGPGCQRVCECQQ-GA---PCDPVSGQC 1180
Query: 142 LCRPGVTGTRCE 153
LC G G CE
Sbjct: 1181 LCPAGFHGQFCE 1192
Score = 146 (56.5 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 55/174 (31%), Positives = 74/174 (42%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C+ G +C DTC G++G + C C G CD T
Sbjct: 694 TGTCL-CLPGFVGSRCQDTCSAGWYGTGCQIR------CACANDGH---------CDPTT 737
Query: 90 GQCSCKPHVVGTNCDQ-CEVGHY--NIISGEGCKSC--DCDPVGSLNRTCDP-ITG-QC- 141
G+CSC P G +C + C+ GH+ + I C + +CD V L C+ G +C
Sbjct: 738 GRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLC-LCEAGYEGPRCE 796
Query: 142 -LCRPGVTGTRCEL-CQPNHYGFSLDGCK-PCMCDPIGSNSLQCDPSGQCPGVF 192
CR G G CE C+ H G + D C C P G C+ + CP F
Sbjct: 797 QSCRQGYYGPSCEQKCRCEH-GAACDHVSGACTC-PAGWRGSFCEHA--CPAGF 846
Score = 144 (55.7 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 50/172 (29%), Positives = 71/172 (41%)
Query: 31 TGDCLKCIYNTGGPQCD------TCLPGYFGDAL--ALPKGDCEPCQCYIPGTLETETFT 82
TG ++C G CD +C PG+ G + A G P C P
Sbjct: 719 TGCQIRCACANDG-HCDPTTGRCSCAPGWTGLSCQRACDSGHWGP-DCIHPCNCSAGHGN 776
Query: 83 PVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQ 140
CD ++G C C+ G C+Q C G+Y G C+ C C+ G+ CD ++G
Sbjct: 777 --CDAVSGLCLCEAGYEGPRCEQSCRQGYY----GPSCEQKCRCEH-GA---ACDHVSGA 826
Query: 141 CLCRPGVTGTRCE-LCQPNHYGFSLDGCKPCM----CDPIGSNSLQCDPSGQ 187
C C G G+ CE C +G D C CD + + S C P+G+
Sbjct: 827 CTCPAGWRGSFCEHACPAGFFGLDCDSACNCSAGAPCDAV-TGSCIC-PAGR 876
Score = 139 (54.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 52/174 (29%), Positives = 69/174 (39%)
Query: 36 KCIYN-TGGPQCDTCL-P-GYFG-D-ALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG 90
KC+ T P C P G+ G D +LA P+G P ++ + CD ++G
Sbjct: 985 KCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCACRQGAA----CDPVSG 1040
Query: 91 QCSCKPHVVGTNCDQ-CEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVT 148
C C P G C+ C + G+GC+ C C G L C G C C G
Sbjct: 1041 ACICSPGKTGVRCEHGCPQDRF----GKGCELKCACRN-GGL---CHATNGSCSCPLGWM 1092
Query: 149 GTRCE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC---PGVFMNRAE 197
G CE C YG + C C GS C+P+ G C PG + E
Sbjct: 1093 GPHCEHACPAGRYGAAC--LLECFCQNNGS----CEPTTGACLCGPGFYGQACE 1140
Score = 123 (48.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 39/113 (34%), Positives = 44/113 (38%)
Query: 85 CDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGC------KSCDCDPVGSLNRTCDPIT 138
CD +C P G CD C G II E C K+C TCDP+
Sbjct: 419 CDDCRNGGTCFPGQDG--CD-CPEGWTGIICNETCPPDTFGKNCSSPCTCQNGGTCDPVL 475
Query: 139 GQCLCRPGVTGTRCEL-CQPNHYGFSLDGC-KPCMCDPIGS-----NSLQCDP 184
G C C PGV+G CE C YG C K C C G + CDP
Sbjct: 476 GACRCPPGVSGAHCEDGCPKGFYG---KHCRKKCHCANRGRCHRLYGACLCDP 525
>UNIPROTKB|D4ABC1 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR017981
Pfam:PF00002 Pfam:PF00008 Pfam:PF01825 PRINTS:PR00249
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
SMART:SM00008 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 RGD:69237 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624 Pfam:PF12003
Pfam:PF02210 OrthoDB:EOG4KKZ23 IPI:IPI00779219
ProteinModelPortal:D4ABC1 Ensembl:ENSRNOT00000055873
ArrayExpress:D4ABC1 Uniprot:D4ABC1
Length = 1553
Score = 179 (68.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 43/129 (33%), Positives = 59/129 (45%)
Query: 46 CDTCLPGYFGDALAL------PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVV 99
C+ CLP Y G P+G C ++ F P C++ +G+C CK +
Sbjct: 720 CE-CLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKEN-- 776
Query: 100 GTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
HY S C CDC P GSL+R CDP GQC C+PGV G +C+ C
Sbjct: 777 ----------HYRPPSSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF 826
Query: 160 YGFSLDGCK 168
+ +GC+
Sbjct: 827 AEVTTNGCE 835
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 47/150 (31%), Positives = 61/150 (40%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ-CSCKPHVVGTNC--- 103
+C PGY+GD D PC+ T + P G C C P+ +G C
Sbjct: 683 SCDPGYYGDNCT-NVCDLNPCEHQSVCTRKPSA--P-----HGYICECLPNYLGPYCETR 734
Query: 104 -DQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG 161
DQ C G + + C C+CD + C+ +G+C C+ NHY
Sbjct: 735 IDQPCPRGWWGHPT---CGPCNCDVSKGFDPDCNKTSGECHCKE------------NHYR 779
Query: 162 F-SLDGCKPCMCDPIGSNSLQCDPS-GQCP 189
S C C C P GS S CDP GQCP
Sbjct: 780 PPSSPTCLLCDCYPTGSLSRVCDPEDGQCP 809
>UNIPROTKB|Q9NYQ7 [details] [associations]
symbol:CELSR3 "Cadherin EGF LAG seven-pass G-type receptor
3" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0007413 "axonal fasciculation"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 Pfam:PF02793
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649
PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 eggNOG:NOG12793 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210 HOGENOM:HOG000231346
HOVERGEN:HBG050887 EMBL:AF231023 EMBL:AC121252 EMBL:AB011536
IPI:IPI00015345 IPI:IPI00798152 PIR:T00250 RefSeq:NP_001398.2
UniGene:Hs.631926 ProteinModelPortal:Q9NYQ7 SMR:Q9NYQ7
IntAct:Q9NYQ7 MINT:MINT-1381104 STRING:Q9NYQ7 PhosphoSite:Q9NYQ7
DMDM:229462826 PaxDb:Q9NYQ7 PRIDE:Q9NYQ7 Ensembl:ENST00000164024
Ensembl:ENST00000544264 GeneID:1951 KEGG:hsa:1951 UCSC:uc003cul.3
CTD:1951 GeneCards:GC03M048673 H-InvDB:HIX0200467 HGNC:HGNC:3230
MIM:604264 neXtProt:NX_Q9NYQ7 PharmGKB:PA26395 KO:K04602
OMA:DGRRVDM OrthoDB:EOG4C87RG PhylomeDB:Q9NYQ7 ChiTaRS:CELSR3
GenomeRNAi:1951 NextBio:7907 ArrayExpress:Q9NYQ7 Bgee:Q9NYQ7
CleanEx:HS_CELSR3 Genevestigator:Q9NYQ7 GermOnline:ENSG00000008300
Uniprot:Q9NYQ7
Length = 3312
Score = 181 (68.8 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 47/142 (33%), Positives = 60/142 (42%)
Query: 37 CIYNTGGPQ---CDTCLPGYFGDALA------LPKGDCEPCQCYIPGTLETET-FTPVCD 86
C + G P CD C+ GYFG P+G C P + F P C+
Sbjct: 1996 CRHLPGAPHGYTCD-CVGGYFGHHCEHRMDQQCPRGWWGSPTCG-PCNCDVHKGFDPNCN 2053
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+ GQC CK HY + C CDC PVGS +R+C P +GQC CRPG
Sbjct: 2054 KTNGQCHCKEF------------HYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPG 2101
Query: 147 VTGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2102 ALGRQCNSCDSPFAEVTASGCR 2123
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 47/149 (31%), Positives = 58/149 (38%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD--- 104
TC PGY+G + PCQ G+ P T C C G +C+
Sbjct: 1971 TCQPGYYGPG-CVDACLLNPCQNQ--GSCRHLPGAP--HGYT--CDCVGGYFGHHCEHRM 2023
Query: 105 --QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG- 161
QC G + C C+CD + C+ GQC C+ E HY
Sbjct: 2024 DQQCPRGWWG---SPTCGPCNCDVHKGFDPNCNKTNGQCHCK--------EF----HYRP 2068
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
D C PC C P+GS S C P SGQCP
Sbjct: 2069 RGSDSCLPCDCYPVGSTSRSCAPHSGQCP 2097
>UNIPROTKB|J9NZ15 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR017983
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00181 SMART:SM00303 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 OMA:DGRRVDM EMBL:AAEX03012233
Ensembl:ENSCAFT00000042870 Uniprot:J9NZ15
Length = 3323
Score = 181 (68.8 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 47/142 (33%), Positives = 60/142 (42%)
Query: 37 CIYNTGGPQ---CDTCLPGYFGDALA------LPKGDCEPCQCYIPGTLETET-FTPVCD 86
C + G P CD C+ GYFG P+G C P + F P C+
Sbjct: 1996 CRHLPGAPHGYTCD-CVGGYFGHHCEHRMDQQCPRGWWGSPTCG-PCNCDVHKGFDPNCN 2053
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+ GQC CK HY + C CDC PVGS +R+C P +GQC CRPG
Sbjct: 2054 KTNGQCHCKEF------------HYRPQGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPG 2101
Query: 147 VTGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2102 ALGRQCNSCDSPFAEVTASGCR 2123
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 47/149 (31%), Positives = 58/149 (38%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD--- 104
TC PGY+G + PCQ G+ P T C C G +C+
Sbjct: 1971 TCWPGYYGPG-CVDACLLNPCQNQ--GSCRHLPGAP--HGYT--CDCVGGYFGHHCEHRM 2023
Query: 105 --QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG- 161
QC G + C C+CD + C+ GQC C+ E HY
Sbjct: 2024 DQQCPRGWWG---SPTCGPCNCDVHKGFDPNCNKTNGQCHCK--------EF----HYRP 2068
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
D C PC C P+GS S C P SGQCP
Sbjct: 2069 QGSDSCLPCDCYPVGSTSRSCAPHSGQCP 2097
>RGD|69237 [details] [associations]
symbol:Celsr2 "cadherin, EGF LAG seven-pass G-type receptor 2"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=ISO] [GO:0003341 "cilium movement" evidence=ISO]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=IEA;ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016055 "Wnt
receptor signaling pathway" evidence=ISO] [GO:0021591 "ventricular
system development" evidence=ISO] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=ISO] [GO:0022407
"regulation of cell-cell adhesion" evidence=IMP] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0033326
"cerebrospinal fluid secretion" evidence=ISO] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 RGD:69237
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 GO:GO:0007283 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186
GO:GO:0022407 eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
Pfam:PF02210 HOGENOM:HOG000231346 HOVERGEN:HBG050887 EMBL:AB011529
IPI:IPI00373409 UniGene:Rn.222746 ProteinModelPortal:Q9QYP2
STRING:Q9QYP2 PhosphoSite:Q9QYP2 PRIDE:Q9QYP2 UCSC:RGD:69237
InParanoid:Q9QYP2 ArrayExpress:Q9QYP2 Genevestigator:Q9QYP2
GermOnline:ENSRNOG00000020058 Uniprot:Q9QYP2
Length = 2144
Score = 179 (68.1 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 43/129 (33%), Positives = 59/129 (45%)
Query: 46 CDTCLPGYFGDALAL------PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVV 99
C+ CLP Y G P+G C ++ F P C++ +G+C CK +
Sbjct: 1080 CE-CLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKEN-- 1136
Query: 100 GTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
HY S C CDC P GSL+R CDP GQC C+PGV G +C+ C
Sbjct: 1137 ----------HYRPPSSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF 1186
Query: 160 YGFSLDGCK 168
+ +GC+
Sbjct: 1187 AEVTTNGCE 1195
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/150 (31%), Positives = 61/150 (40%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ-CSCKPHVVGTNC--- 103
+C PGY+GD D PC+ T + P G C C P+ +G C
Sbjct: 1043 SCDPGYYGDNCT-NVCDLNPCEHQSACTRKPSA--P-----HGYICECLPNYLGPYCETR 1094
Query: 104 -DQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG 161
DQ C G + + C C+CD + C+ +G+C C+ NHY
Sbjct: 1095 IDQPCPRGWWGHPT---CGPCNCDVSKGFDPDCNKTSGECHCKE------------NHYR 1139
Query: 162 F-SLDGCKPCMCDPIGSNSLQCDPS-GQCP 189
S C C C P GS S CDP GQCP
Sbjct: 1140 PPSSPTCLLCDCYPTGSLSRVCDPEDGQCP 1169
>UNIPROTKB|F1ML32 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048680 "positive regulation of axon regeneration"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 GO:GO:0048680 GO:GO:0030169 InterPro:IPR009030
SUPFAM:SSF57184 GO:GO:0005044 GeneTree:ENSGT00690000101691
OMA:GWWGPEC EMBL:DAAA02048662 IPI:IPI00711101
Ensembl:ENSBTAT00000015261 Uniprot:F1ML32
Length = 841
Score = 174 (66.3 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 56/159 (35%), Positives = 69/159 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C +TG C+ C PG+ G P G E C P E C TG C
Sbjct: 285 CSADTGS--CEACKPGWNGTQCHQPCPPGTFGENCSQQCPHCRLGEA----CQPDTGHCQ 338
Query: 94 -CKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C+P G C D C +G + GEGC S C P + CD +TG+C+C G G
Sbjct: 339 RCEPGWRGPRCEDPCLIGTF----GEGCGST-C-PT-CVQGACDAVTGECVCNAGYWGPS 391
Query: 152 CELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C P+ GF + C PC C P G+ CDP SG C
Sbjct: 392 CNTSCPS--GFHGNNCSVPCEC-PEGN----CDPVSGAC 423
Score = 153 (58.9 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 57/182 (31%), Positives = 70/182 (38%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCK 95
+C TG +C+ PG++ PCQC P CDQ TG C C+
Sbjct: 151 RCNPETGACRCE---PGWWSPTCR------RPCQCN-PAAAR-------CDQATGSCLCE 193
Query: 96 PHVVGTNCD-QCEVGHYNIISGEGCKSC-------DC-DPVGSLNRTCDPITGQCLCRPG 146
P G C +C G +C +C P + C ++GQC C PG
Sbjct: 194 PGWWGRRCSFRCACHGSPCAQESGRCACRPGWWGPECRQPCECVRGRCSAVSGQCSCPPG 253
Query: 147 VTGTRCEL-CQPNHYGFSL-DGC------KPCMCDPIGSNSLQCDP--SG-QC-----PG 190
G RCEL C YG D C KPC D GS C P +G QC PG
Sbjct: 254 FQGVRCELPCPAGQYGLRCRDSCGHCKQNKPCSADT-GSCEA-CKPGWNGTQCHQPCPPG 311
Query: 191 VF 192
F
Sbjct: 312 TF 313
Score = 144 (55.7 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 56/188 (29%), Positives = 73/188 (38%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPG-YFGDALALPKGDC-EPCQC 70
I +C G + V G C +C G QC++ PG Y+G P DC E C C
Sbjct: 65 IPICEGLDACREDEVCVKPGLC-RCKPGFFGAQCNSRCPGQYWG-----P--DCREVCAC 116
Query: 71 YIPGTLETETFTPVC------DQLTGQCSCKPHV---VGTNCDQCEVGHYNIISGEGCKS 121
+ G E T C D+ C+C PH T +CE G ++ C+
Sbjct: 117 HPHGQCEPATGVCHCQPDRWGDRCEFPCACGPHGRCNPETGACRCEPGWWS----PTCRR 172
Query: 122 -CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSL 180
C C+P + CD TG CLC PG G RC H C C P G
Sbjct: 173 PCQCNPAAA---RCDQATGSCLCEPGWWGRRCSFRCACHGSPCAQESGRCACRP-GWWGP 228
Query: 181 QCDPSGQC 188
+C +C
Sbjct: 229 ECRQPCEC 236
Score = 137 (53.3 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 42/124 (33%), Positives = 51/124 (41%)
Query: 69 QCYIP--GTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS-CDCD 125
+C IP L+ VC + G C CKP G C+ G Y G C+ C C
Sbjct: 62 ECTIPICEGLDACREDEVCVK-PGLCRCKPGFFGAQCNSRCPGQY---WGPDCREVCACH 117
Query: 126 PVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
P G C+P TG C C+P G RCE C +G C C+P G S C
Sbjct: 118 PHGQ----CEPATGVCHCQPDRWGDRCEFPCACGPHGRCNPETGACRCEP-GWWSPTCRR 172
Query: 185 SGQC 188
QC
Sbjct: 173 PCQC 176
>UNIPROTKB|F1MHH5 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007413 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM
EMBL:DAAA02054431 IPI:IPI00728856 Ensembl:ENSBTAT00000029126
Uniprot:F1MHH5
Length = 3300
Score = 180 (68.4 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 47/142 (33%), Positives = 60/142 (42%)
Query: 37 CIYNTGGPQ---CDTCLPGYFGDALA------LPKGDCEPCQCYIPGTLETET-FTPVCD 86
C + G P CD C+ GYFG P+G C P + F P C+
Sbjct: 1978 CRHLPGAPHGYTCD-CVGGYFGHHCEHRMDQQCPRGWWGSPTCG-PCNCDVHKGFDPNCN 2035
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+ GQC CK HY + C CDC PVGS +R+C P +GQC CRPG
Sbjct: 2036 KTDGQCHCKEF------------HYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCRPG 2083
Query: 147 VTGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2084 ALGRQCNSCDSPFAEVTASGCR 2105
Score = 134 (52.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 47/149 (31%), Positives = 58/149 (38%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD--- 104
TC PGY+G + PCQ G+ P T C C G +C+
Sbjct: 1953 TCWPGYYGPG-CVDACLLNPCQNQ--GSCRHLPGAP--HGYT--CDCVGGYFGHHCEHRM 2005
Query: 105 --QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG- 161
QC G + C C+CD + C+ GQC C+ E HY
Sbjct: 2006 DQQCPRGWWG---SPTCGPCNCDVHKGFDPNCNKTDGQCHCK--------EF----HYRP 2050
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
D C PC C P+GS S C P SGQCP
Sbjct: 2051 RGSDSCLPCDCYPVGSTSRSCAPHSGQCP 2079
>UNIPROTKB|F1RKL7 [details] [associations]
symbol:MEGF10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055001 "muscle cell development" evidence=IEA]
[GO:0051147 "regulation of muscle cell differentiation"
evidence=IEA] [GO:0048641 "regulation of skeletal muscle tissue
development" evidence=IEA] [GO:0043654 "recognition of apoptotic
cell" evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0014841 "satellite cell proliferation"
evidence=IEA] [GO:0014816 "satellite cell differentiation"
evidence=IEA] [GO:0014719 "satellite cell activation" evidence=IEA]
[GO:0001891 "phagocytic cup" evidence=IEA] InterPro:IPR000742
InterPro:IPR011489 Pfam:PF07546 PROSITE:PS50026 PROSITE:PS51041
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001891
GO:GO:0048641 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0055001 GO:GO:0034109 GO:GO:0014816 Pfam:PF12661
GeneTree:ENSGT00690000101691 GO:GO:0043654 GO:GO:0051147
GO:GO:0014719 GO:GO:0014841 EMBL:AEMK01186990 EMBL:CU582932
EMBL:CU914445 Ensembl:ENSSSCT00000015571 OMA:EDCAKEC
ArrayExpress:F1RKL7 Uniprot:F1RKL7
Length = 305
Score = 165 (63.1 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 50/160 (31%), Positives = 69/160 (43%)
Query: 36 KCIYNTG-GPQCDTCLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
KC++ P C PG+ G + + GD C + +C+ +TG C
Sbjct: 112 KCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCSSRCQCKNRA---LCNPITGACH 168
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G C++ CE G Y G C + C C G+ TCD +TG+C C PG TG
Sbjct: 169 CAAGFRGWRCEERCEQGTY----GNDCHQRCQCQN-GA---TCDHVTGECRCPPGYTGAF 220
Query: 152 CE-LCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
CE LC P +G + PC N C +G+CP
Sbjct: 221 CEDLCPPGKHGPQCEQRCPCQ------NGGVCHHVTGECP 254
Score = 154 (59.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 51/137 (37%), Positives = 59/137 (43%)
Query: 29 GTTG-DCLKCIYNTGGPQCD------TCLPGYFG---DALALP--KG-DCEP-CQCYIPG 74
GT G DC + G CD C PGY G + L P G CE C C G
Sbjct: 185 GTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGAFCEDLCPPGKHGPQCEQRCPCQNGG 244
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGC-KSCDCDPVGSLNR 132
VC +TG+C C P +GT C Q C G + G+ C + C C G
Sbjct: 245 ---------VCHHVTGECPCPPGWLGTVCGQPCPEGRF----GKNCSQECQCHNGG---- 287
Query: 133 TCDPITGQCLCRPGVTG 149
TCD TGQC C PG TG
Sbjct: 288 TCDAATGQCHCSPGYTG 304
Score = 146 (56.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 43/130 (33%), Positives = 56/130 (43%)
Query: 64 DC-EPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC-DQCEVGHYNIISGEGCKS 121
DC + CQC T CD +TG+C C P G C D C G + G C+
Sbjct: 190 DCHQRCQCQNGAT---------CDHVTGECRCPPGYTGAFCEDLCPPGKH----GPQCEQ 236
Query: 122 -CDCDPVGSLNRTCDPITGQCLCRPGVTGTRC-ELCQPNHYGFSLDGCKPCMCDPIGSNS 179
C C G C +TG+C C PG GT C + C +G + + C C G+
Sbjct: 237 RCPCQNGG----VCHHVTGECPCPPGWLGTVCGQPCPEGRFGKNCS--QECQCHNGGT-- 288
Query: 180 LQCDPS-GQC 188
CD + GQC
Sbjct: 289 --CDAATGQC 296
>FB|FBgn0024836 [details] [associations]
symbol:stan "starry night" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=IEA;ISS]
[GO:0007156 "homophilic cell adhesion" evidence=ISS;IDA;TAS]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA;ISS]
[GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=ISS;IMP] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEP;IMP;NAS] [GO:0007409 "axonogenesis" evidence=IMP;NAS]
[GO:0005911 "cell-cell junction" evidence=IDA] [GO:0005057
"receptor signaling protein activity" evidence=ISM;IMP] [GO:0016358
"dendrite development" evidence=IEP] [GO:0007367 "segment polarity
determination" evidence=IEP;IMP] [GO:0016021 "integral to membrane"
evidence=IEA;ISM;ISS;NAS] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;TAS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0004872 "receptor activity" evidence=ISS]
[GO:0016318 "ommatidial rotation" evidence=IMP;NAS] [GO:0048057
"R3/R4 development" evidence=IMP] [GO:0042067 "establishment of
ommatidial planar polarity" evidence=IMP;TAS] [GO:0007164
"establishment of tissue polarity" evidence=NAS] [GO:0016319
"mushroom body development" evidence=IMP] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=NAS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=NAS] [GO:0001736 "establishment of planar polarity"
evidence=IMP;TAS] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0001738 "morphogenesis of a polarized epithelium" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0050770 "regulation
of axonogenesis" evidence=IDA] [GO:0051963 "regulation of synapse
assembly" evidence=IDA] [GO:0035159 "regulation of tube length,
open tracheal system" evidence=IMP] [GO:0070593 "dendrite
self-avoidance" evidence=IMP] [GO:0090175 "regulation of
establishment of planar polarity" evidence=IGI] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
EMBL:AE013599 GO:GO:0007411 GO:GO:0005887 GO:GO:0016055
GO:GO:0004930 GO:GO:0007218 GO:GO:0007464 GO:GO:0005509
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 GO:GO:0050770 GO:GO:0051963
GO:GO:0016319 GO:GO:0005057 PROSITE:PS01186 eggNOG:NOG12793
GO:GO:0050839 GO:GO:0007367 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0016339 GO:GO:0007156
GO:GO:0004888 GO:GO:0030178 GO:GO:0030177 GO:GO:0035159
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 KO:K04600 OMA:YILRAYA
GO:GO:0070593 EMBL:AF172329 EMBL:AB028498 RefSeq:NP_001188903.1
RefSeq:NP_724962.3 UniGene:Dm.4360 ProteinModelPortal:Q9V5N8
SMR:Q9V5N8 IntAct:Q9V5N8 STRING:Q9V5N8 PaxDb:Q9V5N8
EnsemblMetazoa:FBtr0088214 EnsemblMetazoa:FBtr0303223 GeneID:36125
KEGG:dme:Dmel_CG11895 CTD:36125 FlyBase:FBgn0024836
InParanoid:Q9V5N8 OrthoDB:EOG4X69Q2 PhylomeDB:Q9V5N8
GenomeRNAi:36125 NextBio:796977 Bgee:Q9V5N8 GermOnline:CG11895
GO:GO:0048057 Uniprot:Q9V5N8
Length = 3579
Score = 180 (68.4 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
+ P C++ TGQC CK TN HY + C SCDC +GS + C+P+TGQ
Sbjct: 2066 YHPDCNKTTGQCYCK-----TN-------HYQPPNETACLSCDCYSIGSFSGACNPLTGQ 2113
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCK 168
C CR GV G RC+ C + +L GC+
Sbjct: 2114 CECREGVIGRRCDSCSNPYAEVTLSGCE 2141
>UNIPROTKB|G3V8P3 [details] [associations]
symbol:Celsr2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0021591 "ventricular system development"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 RGD:69237 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 EMBL:CH473952 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 CTD:1952 KO:K04601
OMA:YILRAYA UniGene:Rn.222746 RefSeq:NP_001178039.1
Ensembl:ENSRNOT00000027263 GeneID:83465 KEGG:rno:83465
NextBio:615853 Uniprot:G3V8P3
Length = 2919
Score = 179 (68.1 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 43/129 (33%), Positives = 59/129 (45%)
Query: 46 CDTCLPGYFGDALAL------PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVV 99
C+ CLP Y G P+G C ++ F P C++ +G+C CK +
Sbjct: 1855 CE-CLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKEN-- 1911
Query: 100 GTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
HY S C CDC P GSL+R CDP GQC C+PGV G +C+ C
Sbjct: 1912 ----------HYRPPSSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF 1961
Query: 160 YGFSLDGCK 168
+ +GC+
Sbjct: 1962 AEVTTNGCE 1970
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 47/150 (31%), Positives = 61/150 (40%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ-CSCKPHVVGTNC--- 103
+C PGY+GD D PC+ T + P G C C P+ +G C
Sbjct: 1818 SCDPGYYGDNCT-NVCDLNPCEHQSVCTRKPSA--P-----HGYICECLPNYLGPYCETR 1869
Query: 104 -DQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG 161
DQ C G + + C C+CD + C+ +G+C C+ NHY
Sbjct: 1870 IDQPCPRGWWGHPT---CGPCNCDVSKGFDPDCNKTSGECHCKE------------NHYR 1914
Query: 162 F-SLDGCKPCMCDPIGSNSLQCDPS-GQCP 189
S C C C P GS S CDP GQCP
Sbjct: 1915 PPSSPTCLLCDCYPTGSLSRVCDPEDGQCP 1944
>ZFIN|ZDB-GENE-050823-4 [details] [associations]
symbol:celsr1b "cadherin EGF LAG seven-pass G-type
receptor 1b" species:7955 "Danio rerio" [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0042074 "cell migration
involved in gastrulation" evidence=IGI;IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 ZFIN:ZDB-GENE-050823-4 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0042074 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 KO:K04600 EMBL:CU929369
EMBL:CU041386 IPI:IPI00614991 RefSeq:XP_001920772.2
UniGene:Dr.134446 Ensembl:ENSDART00000128852 GeneID:556520
KEGG:dre:556520 CTD:556520 NextBio:20881525 Bgee:F1QBS8
Uniprot:F1QBS8
Length = 3006
Score = 179 (68.1 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 46/139 (33%), Positives = 63/139 (45%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLT 89
T C++ G CD C Y+G KGD +PC G T P CD
Sbjct: 1897 TSSCVRKPSTKRGYSCD-CGHNYYGQYCE-HKGD-QPCA---HGWWGNPTCGPCNCDLSK 1950
Query: 90 G-QCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVT 148
G + C G C C+ ++ + G+ C CDC +GS +R CDP+TGQC C+ GV
Sbjct: 1951 GFKRDCNK-TTG-ECS-CKDNYFRPLGGDTCYPCDCFHLGSHSRVCDPVTGQCSCKTGVV 2007
Query: 149 GTRCELCQPNHYGFSLDGC 167
G +C C ++ GC
Sbjct: 2008 GRQCNRCDNPFAEVTVTGC 2026
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 44/147 (29%), Positives = 56/147 (38%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTG-QCSCKPHVVGTNC---- 103
C PGYFG DC C + T + G C C + G C
Sbjct: 1876 CQPGYFGR-------DCVDA-CLLNPCEHTSSCVRKPSTKRGYSCDCGHNYYGQYCEHKG 1927
Query: 104 DQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
DQ C G + C C+CD R C+ TG+C C+ +P
Sbjct: 1928 DQPCAHGWWG---NPTCGPCNCDLSKGFKRDCNKTTGECSCKDNYF-------RP----L 1973
Query: 163 SLDGCKPCMCDPIGSNSLQCDP-SGQC 188
D C PC C +GS+S CDP +GQC
Sbjct: 1974 GGDTCYPCDCFHLGSHSRVCDPVTGQC 2000
>ZFIN|ZDB-GENE-030131-230 [details] [associations]
symbol:si:ch211-241e1.3 "si:ch211-241e1.3"
species:7955 "Danio rerio" [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 ZFIN:ZDB-GENE-030131-230 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 EMBL:AL935300 GO:GO:0005606
GeneTree:ENSGT00700000104042 IPI:IPI00484822
Ensembl:ENSDART00000058281 ArrayExpress:F1R4X8 Bgee:F1R4X8
Uniprot:F1R4X8
Length = 1368
Score = 175 (66.7 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/152 (30%), Positives = 70/152 (46%)
Query: 49 CLPGYFGDALAL-PKGDCEPCQCYIPGTLETETFTPVCDQLTGQC-SCKPHVVGTNCDQC 106
C G++ D L P+ C PC C + C++ TG+C +C + G C+ C
Sbjct: 108 CPAGHYLDRSGLFPR--CVPCSC--------NGHSNECEENTGRCLNCADNTAGQRCELC 157
Query: 107 EVGHYNIISGEGCKSCDCDPVGSLNRT----CDPITG--QCLCRPGVTGTRCELCQPNHY 160
+ G Y + C +C C P+G+ + C QC+C+ G G RCE C +Y
Sbjct: 158 KEGFYWSEARRKCTACPC-PLGNQDNNFAVGCTETQSRIQCVCKTGHAGERCERCASGYY 216
Query: 161 GFSL---DGCKPCMCDPIGSNSLQCDP-SGQC 188
G L GC+PC C + +L CD +G C
Sbjct: 217 GDPLVYGGGCRPCRC----AGNL-CDSKTGAC 243
Score = 168 (64.2 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 40/116 (34%), Positives = 55/116 (47%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPG-YFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG CL C NT G +C+ C G Y+ +A + C C C + G + F C +
Sbjct: 139 TGRCLNCADNTAGQRCELCKEGFYWSEA----RRKCTACPCPL-GN-QDNNFAVGCTETQ 192
Query: 90 G--QCSCKPHVVGTNCDQCEVGHYN--IISGEGCKSCDCDPVGSLNRTCDPITGQC 141
QC CK G C++C G+Y ++ G GC+ C C G+L CD TG C
Sbjct: 193 SRIQCVCKTGHAGERCERCASGYYGDPLVYGGGCRPCRC--AGNL---CDSKTGAC 243
Score = 117 (46.2 bits), Expect = 0.00048, P = 0.00048
Identities = 29/77 (37%), Positives = 37/77 (48%)
Query: 105 QCEVGHYNIISG--EGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGTRCELCQPNHY- 160
+C GHY SG C C C+ G N C+ TG+CL C G RCELC+ Y
Sbjct: 107 RCPAGHYLDRSGLFPRCVPCSCN--GHSNE-CEENTGRCLNCADNTAGQRCELCKEGFYW 163
Query: 161 GFSLDGCKPCMCDPIGS 177
+ C C C P+G+
Sbjct: 164 SEARRKCTACPC-PLGN 179
Score = 115 (45.5 bits), Expect = 0.00084, P = 0.00084
Identities = 28/76 (36%), Positives = 37/76 (48%)
Query: 35 LKCIYNTG--GPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQC 92
++C+ TG G +C+ C GY+GD L G C PC+C G L CD TG C
Sbjct: 195 IQCVCKTGHAGERCERCASGYYGDPLVYG-GGCRPCRC--AGNL--------CDSKTGAC 243
Query: 93 SCKPHVVGTNCD-QCE 107
+ TN + QCE
Sbjct: 244 RNSLELQDTNTEEQCE 259
>UNIPROTKB|I3LNG4 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048680 "positive regulation of axon regeneration"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 GO:GO:0048680 GO:GO:0030169
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 OMA:GWWGPEC EMBL:FP312656
Ensembl:ENSSSCT00000032386 Uniprot:I3LNG4
Length = 834
Score = 172 (65.6 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 52/159 (32%), Positives = 69/159 (43%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQC- 92
C +TG +C++C PG+ G P G E C+ P E C TG C
Sbjct: 278 CSADTG--RCESCEPGWNGTQCHQPCPPGTFGESCRQQCPHCRLGEA----CQPDTGHCQ 331
Query: 93 SCKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
SC P +G C D C G + G C +C + CD +TG+C+C G G
Sbjct: 332 SCDPGRLGLRCEDPCPTGTFGEDCGSTCPTC-------VQGACDAVTGECVCNTGYWGPS 384
Query: 152 CELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C + P+ GF + C PC C P G+ C P SG C
Sbjct: 385 CNISCPS--GFHGNNCSLPCEC-PEGT----CHPVSGAC 416
Score = 160 (61.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 50/157 (31%), Positives = 62/157 (39%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP--VCDQLTGQCSCKPHVVGTNCD-Q 105
C PG+FG A C P Q + P ET T P C+ TG C C+P G+ C+
Sbjct: 81 CKPGFFG---AQCNSRC-PGQYWGPDCRETCTCHPHGQCEPATGVCRCQPDRWGSRCEFP 136
Query: 106 CEVGHYNIISGE--GC------------KSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C G + E C + C C+P + CDP TG CLC PG G R
Sbjct: 137 CACGPHGRCDPETGACHCEPGWWSSTCRRPCQCNPAAA---RCDPATGSCLCEPGWWGRR 193
Query: 152 CELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C P H C C P G +C +C
Sbjct: 194 CSFRCPCHGSPCAQESGRCACRP-GWWGPECRQPCEC 229
Score = 152 (58.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 46/160 (28%), Positives = 63/160 (39%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCK 95
+C TG C+ PG++ PCQC P CD TG C C+
Sbjct: 144 RCDPETGACHCE---PGWWSSTCR------RPCQCN-PAAAR-------CDPATGSCLCE 186
Query: 96 PHVVGTNCD-QCEVGHYNIISGEGCKSC-------DC-DPVGSLNRTCDPITGQCLCRPG 146
P G C +C G +C +C P + C +GQC+C PG
Sbjct: 187 PGWWGRRCSFRCPCHGSPCAQESGRCACRPGWWGPECRQPCECVRGRCSAASGQCICPPG 246
Query: 147 VTGTRCEL-CQPNHYGFSL-DGCKPC-MCDPIGSNSLQCD 183
G RCEL C P YG D C C +P +++ +C+
Sbjct: 247 FRGARCELPCAPGRYGPQCRDSCGHCKQNEPCSADTGRCE 286
Score = 145 (56.1 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 42/123 (34%), Positives = 55/123 (44%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCL 142
VC + G C CKP G C+ G Y G C+ +C C P G C+P TG C
Sbjct: 72 VCVK-PGLCRCKPGFFGAQCNSRCPGQY---WGPDCRETCTCHPHGQ----CEPATGVCR 123
Query: 143 CRPGVTGTRCEL---------CQPN----HY--GFSLDGCK-PCMCDPIGSNSLQCDPS- 185
C+P G+RCE C P H G+ C+ PC C+P + +CDP+
Sbjct: 124 CQPDRWGSRCEFPCACGPHGRCDPETGACHCEPGWWSSTCRRPCQCNPAAA---RCDPAT 180
Query: 186 GQC 188
G C
Sbjct: 181 GSC 183
>UNIPROTKB|G3MXZ5 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PRINTS:PR00249 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 SMART:SM00008 SMART:SM00179
SMART:SM00181 SMART:SM00208 SMART:SM00303 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:DAAA02007576 Ensembl:ENSBTAT00000063317
Uniprot:G3MXZ5
Length = 1482
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
F P C++ +G+C CK + HY C CDC P GSL+R CDP GQ
Sbjct: 760 FDPDCNKTSGECHCKEN------------HYRPPGSPACLLCDCYPTGSLSRVCDPEEGQ 807
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCK 168
C C+PGV G +C+ C + +GC+
Sbjct: 808 CPCKPGVIGRQCDRCDNPFAEVTTNGCE 835
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 46/149 (30%), Positives = 59/149 (39%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC---- 103
+C PGY+GD D PC+ T + P T C C P +G C
Sbjct: 683 SCDPGYYGDNCT-NVCDLNPCEHQSMCTRKPSA--P--HGYT--CECPPSYLGPYCETRI 735
Query: 104 DQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
DQ C G + + C C+CD + C+ +G+C C+ NHY
Sbjct: 736 DQPCPRGWWGHPT---CGPCNCDVSKGFDPDCNKTSGECHCKE------------NHYRP 780
Query: 163 -SLDGCKPCMCDPIGSNSLQCDPS-GQCP 189
C C C P GS S CDP GQCP
Sbjct: 781 PGSPACLLCDCYPTGSLSRVCDPEEGQCP 809
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 43/143 (30%), Positives = 58/143 (40%)
Query: 30 TTGDCLKCIYNTG-GPQCD-TCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVC 85
T G C C + G P C+ T + + P G C C CY G+L VC
Sbjct: 748 TCGPC-NCDVSKGFDPDCNKTSGECHCKENHYRPPGSPACLLCDCYPTGSLSR-----VC 801
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK----SCDCDPVGSL--NRTCDPITG 139
D GQC CKP V+G CD+C+ + ++ GC+ SC + RT +
Sbjct: 802 DPEEGQCPCKPGVIGRQCDRCD-NPFAEVTTNGCEVNYDSCPRAIEAGIWWPRTRFGLPA 860
Query: 140 QCLCRPGVTGTRCELCQPNHYGF 162
C G GT C H G+
Sbjct: 861 AAPCPKGSFGTAVRHCD-EHRGW 882
>UNIPROTKB|F1SKK7 [details] [associations]
symbol:CELSR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR017983 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00181 SMART:SM00303
GO:GO:0016021 GO:GO:0005886 GO:GO:0001764 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007413
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:CU861514 EMBL:CU633242 Ensembl:ENSSSCT00000012437 OMA:PLYAPRW
Uniprot:F1SKK7
Length = 3307
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 47/142 (33%), Positives = 60/142 (42%)
Query: 37 CIYNTGGP---QCDTCLPGYFGDALA------LPKGDCEPCQCYIPGTLETET-FTPVCD 86
C + G P CD C+ GYFG P+G C P + F P C+
Sbjct: 1990 CRHLPGAPLGYTCD-CVGGYFGHHCEHRMDQQCPRGWWGSPTCG-PCNCDVHKGFDPNCN 2047
Query: 87 QLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPG 146
+ GQC CK HY + C CDC PVGS +R+C P +GQC CRPG
Sbjct: 2048 KTNGQCHCKEF------------HYRPRGSDLCLPCDCYPVGSTSRSCAPHSGQCPCRPG 2095
Query: 147 VTGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2096 ALGRQCNSCDSPFAEVTASGCQ 2117
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 47/149 (31%), Positives = 58/149 (38%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD--- 104
TC PGY+G + PCQ G+ P L C C G +C+
Sbjct: 1965 TCWPGYYGPG-CVDACLLNPCQNQ--GSCRHLPGAP----LGYTCDCVGGYFGHHCEHRM 2017
Query: 105 --QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYG- 161
QC G + C C+CD + C+ GQC C+ E HY
Sbjct: 2018 DQQCPRGWWG---SPTCGPCNCDVHKGFDPNCNKTNGQCHCK--------EF----HYRP 2062
Query: 162 FSLDGCKPCMCDPIGSNSLQCDP-SGQCP 189
D C PC C P+GS S C P SGQCP
Sbjct: 2063 RGSDLCLPCDCYPVGSTSRSCAPHSGQCP 2091
>UNIPROTKB|I3LI99 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
EMBL:CU856114 Ensembl:ENSSSCT00000026983 Uniprot:I3LI99
Length = 959
Score = 169 (64.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 41/113 (36%), Positives = 54/113 (47%)
Query: 68 CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQ-----CEVGHYNIISGEGCKS- 121
C C P L + P Q TGQC C+ G C C Y ++ GC++
Sbjct: 359 CHCD-PERL-AKARGPTHPQFTGQCPCREGFGGLTCSTAAIRLCPDRTYEDVAA-GCRAL 415
Query: 122 -CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH---YGFSLDGCKPC 170
CDCD G+ CD +G+CLCRPG+TG RC+ CQ + Y + C PC
Sbjct: 416 ACDCDFRGTEGPGCDKASGRCLCRPGLTGPRCDQCQRGYCDRYPVCV-ACHPC 467
>UNIPROTKB|F1RGK2 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:FP102452
Ensembl:ENSSSCT00000003355 Uniprot:F1RGK2
Length = 2789
Score = 152 (58.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 34/93 (36%), Positives = 45/93 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C T G C+ C PG FG+A G C PCQC G + CD L+G
Sbjct: 1177 GFCDECQDWTWGEHCERCRPGSFGNATG--SGGCRPCQCNGHG----DPRRGHCDNLSGL 1230
Query: 92 CSCKPHVVGTNCDQCEVGHY-NIISGEGC-KSC 122
C C+ H G +C C G+Y + +G C + C
Sbjct: 1231 CFCQDHTEGAHCQLCSPGYYGDPRAGGSCFREC 1263
Score = 148 (57.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 90 GQCS-CKPHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRT-CDPITGQCLCRPG 146
G C C+ G +C++C G + +G G C+ C C+ G R CD ++G C C+
Sbjct: 1177 GFCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDH 1236
Query: 147 VTGTRCELCQPNHYG 161
G C+LC P +YG
Sbjct: 1237 TEGAHCQLCSPGYYG 1251
Score = 52 (23.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 133 TCDPITGQCLCRPGVTGTRCELCQ-PNHYGFSLDGCKPCMCDPIGSNS 179
+C P+ +C+ + GVTG LCQ P G++ C+ +C P N+
Sbjct: 1414 SC-PVPQECVPQDGVTGAG--LCQCPQ--GWAGPHCRMALC-PENCNA 1455
Score = 40 (19.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPC 170
+P GT LC P FS D PC
Sbjct: 1313 QPCAPGT---LCPPLTLTFSPDSSTPC 1336
>UNIPROTKB|Q14162 [details] [associations]
symbol:SCARF1 "Scavenger receptor class F member 1"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=IDA] [GO:0006898 "receptor-mediated endocytosis"
evidence=TAS] [GO:0004888 "transmembrane signaling receptor
activity" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=IDA] [GO:0005044 "scavenger receptor activity"
evidence=IDA] [GO:0006707 "cholesterol catabolic process"
evidence=IC] [GO:0010976 "positive regulation of neuron projection
development" evidence=ISS] [GO:0016322 "neuron remodeling"
evidence=ISS] [GO:0048680 "positive regulation of axon
regeneration" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 EMBL:CH471108 GO:GO:0006707
EMBL:AC130343 GO:GO:0016358 GO:GO:0016322 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 GO:GO:0048680 GO:GO:0004888
GO:GO:0030169 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
Pfam:PF12661 eggNOG:NOG284054 HOGENOM:HOG000015093 EMBL:D86864
EMBL:AB052946 EMBL:AB052947 EMBL:AB052948 EMBL:AB052949
EMBL:AB052950 EMBL:D63483 EMBL:BC039735 IPI:IPI00066367
IPI:IPI00169257 IPI:IPI00169258 IPI:IPI00337750 IPI:IPI00337751
RefSeq:NP_003684.2 RefSeq:NP_663325.1 RefSeq:NP_663327.2
UniGene:Hs.647430 ProteinModelPortal:Q14162 SMR:Q14162
STRING:Q14162 PhosphoSite:Q14162 DMDM:311033530 PaxDb:Q14162
PRIDE:Q14162 Ensembl:ENST00000263071 Ensembl:ENST00000348987
Ensembl:ENST00000434376 Ensembl:ENST00000571272 GeneID:8578
KEGG:hsa:8578 UCSC:uc002fsy.1 UCSC:uc002fsz.1 UCSC:uc010cjv.1
CTD:8578 GeneCards:GC17M001537 H-InvDB:HIX0013404 HGNC:HGNC:16820
HPA:HPA035108 MIM:607873 neXtProt:NX_Q14162 PharmGKB:PA38420
HOVERGEN:HBG099941 InParanoid:Q14162 OMA:GWWGPEC OrthoDB:EOG4S1T6G
GenomeRNAi:8578 NextBio:32179 ArrayExpress:Q14162 Bgee:Q14162
CleanEx:HS_SCARF1 Genevestigator:Q14162 GermOnline:ENSG00000074660
Uniprot:Q14162
Length = 830
Score = 167 (63.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 53/162 (32%), Positives = 67/162 (41%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL---ALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCS 93
C +TG C++C PG+ G LP E C+ P E C+ TG C
Sbjct: 274 CSPDTGS--CESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEA----CEPDTGHCQ 327
Query: 94 -CKPHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P +G C D C G + G C +C + +CD +TG C+C G G
Sbjct: 328 RCDPGWLGPRCEDPCPTGTFGEDCGSTCPTC-------VQGSCDTVTGDCVCSAGYWGPS 380
Query: 152 CELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC-PG 190
C P GF + C PC C P G C P SG C PG
Sbjct: 381 CNASCPA--GFHGNNCSVPCEC-PEGL----CHPVSGSCQPG 415
Score = 141 (54.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 59/203 (29%), Positives = 73/203 (35%)
Query: 31 TGDCLKCIYNTGGPQCD-TCLPGYFGDA-LALPKGDCEP----CQCYIPGTLETETFTPV 84
TG C +C + G +C+ C G G A CEP C P + T
Sbjct: 115 TGAC-QCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRP--CQCNTAAAR 171
Query: 85 CDQLTGQCSCKPHVVGTNCD---QCEVGHYNIISGE-GCK----SCDCDPVGSLNR-TCD 135
C+Q TG C CKP G C C SG C+ +C R C
Sbjct: 172 CEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRGRCS 231
Query: 136 PITGQCLCRPGVTGTRCEL-CQPNHYGFSL-DGCKPCM----CDPIGSNSLQCDP--SG- 186
+G+C C PG G RCEL C +G C C C P + C+P +G
Sbjct: 232 AASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWNGT 291
Query: 187 QC-----PGVFMNRAEMSSDDVR 204
QC PG F E R
Sbjct: 292 QCQQPCLPGTFGESCEQQCPHCR 314
Score = 139 (54.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 54/189 (28%), Positives = 75/189 (39%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPG-YFGDALALPKGDC-EPCQC 70
I +C GP + V G C +C G C + PG Y+G P DC E C C
Sbjct: 54 IPICEGPDACQKDEVCVKPGLC-RCKPGFFGAHCSSRCPGQYWG-----P--DCRESCPC 105
Query: 71 YIPGTLETETFTPVC--DQLTGQC----SCKPHV---VGTNCDQCEVGHYNIISGEGCKS 121
+ G E T C D+ +C +C PH T CE G ++ C+
Sbjct: 106 HPHGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWS----STCRR 161
Query: 122 -CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNS 179
C C+ + C+ TG C+C+PG G RC C + D + C C P G
Sbjct: 162 PCQCNTAAA---RCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGR-CACRP-GWWG 216
Query: 180 LQCDPSGQC 188
+C +C
Sbjct: 217 PECQQQCEC 225
>UNIPROTKB|E1BJ11 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021591 "ventricular system development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001368
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00208
SMART:SM00303 InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886
GO:GO:0001764 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:YILRAYA
EMBL:DAAA02007576 IPI:IPI00711984 Ensembl:ENSBTAT00000025033
Uniprot:E1BJ11
Length = 2918
Score = 173 (66.0 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
F P C++ +G+C CK + HY C CDC P GSL+R CDP GQ
Sbjct: 1890 FDPDCNKTSGECHCKEN------------HYRPPGSPACLLCDCYPTGSLSRVCDPEEGQ 1937
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCK 168
C C+PGV G +C+ C + +GC+
Sbjct: 1938 CPCKPGVIGRQCDRCDNPFAEVTTNGCE 1965
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 46/149 (30%), Positives = 59/149 (39%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC---- 103
+C PGY+GD D PC+ T + P T C C P +G C
Sbjct: 1813 SCDPGYYGDNCT-NVCDLNPCEHQSMCTRKPSA--P--HGYT--CECPPSYLGPYCETRI 1865
Query: 104 DQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
DQ C G + + C C+CD + C+ +G+C C+ NHY
Sbjct: 1866 DQPCPRGWWGHPT---CGPCNCDVSKGFDPDCNKTSGECHCKE------------NHYRP 1910
Query: 163 -SLDGCKPCMCDPIGSNSLQCDPS-GQCP 189
C C C P GS S CDP GQCP
Sbjct: 1911 PGSPACLLCDCYPTGSLSRVCDPEEGQCP 1939
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 43/143 (30%), Positives = 58/143 (40%)
Query: 30 TTGDCLKCIYNTG-GPQCD-TCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVC 85
T G C C + G P C+ T + + P G C C CY G+L VC
Sbjct: 1878 TCGPC-NCDVSKGFDPDCNKTSGECHCKENHYRPPGSPACLLCDCYPTGSLSR-----VC 1931
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK----SCDCDPVGSL--NRTCDPITG 139
D GQC CKP V+G CD+C+ + ++ GC+ SC + RT +
Sbjct: 1932 DPEEGQCPCKPGVIGRQCDRCD-NPFAEVTTNGCEVNYDSCPRAIEAGIWWPRTRFGLPA 1990
Query: 140 QCLCRPGVTGTRCELCQPNHYGF 162
C G GT C H G+
Sbjct: 1991 AAPCPKGSFGTAVRHCD-EHRGW 2012
>MGI|MGI:1858235 [details] [associations]
symbol:Celsr2 "cadherin, EGF LAG seven-pass G-type receptor
2 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0003341 "cilium
movement" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IDA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IDA] [GO:0021591 "ventricular system
development" evidence=IMP] [GO:0021999 "neural plate
anterior/posterior regionalization" evidence=IDA] [GO:0022407
"regulation of cell-cell adhesion" evidence=ISO] [GO:0032880
"regulation of protein localization" evidence=IGI;IMP] [GO:0033326
"cerebrospinal fluid secretion" evidence=IGI] [GO:0042384 "cilium
assembly" evidence=IGI;IMP] [GO:0048813 "dendrite morphogenesis"
evidence=ISO] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232
PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 MGI:MGI:1858235 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 GO:GO:0001764 GO:GO:0006355 GO:GO:0016055
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 eggNOG:NOG12793
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0021591 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
GO:GO:0021999 EMBL:AB028499 EMBL:AF031573 EMBL:BC005499
IPI:IPI00313878 IPI:IPI00850704 UniGene:Mm.39728
ProteinModelPortal:Q9R0M0 SMR:Q9R0M0 STRING:Q9R0M0 MEROPS:S63.009
PhosphoSite:Q9R0M0 PaxDb:Q9R0M0 PRIDE:Q9R0M0 InParanoid:Q9R0M0
Genevestigator:Q9R0M0 GermOnline:ENSMUSG00000068740 Uniprot:Q9R0M0
Length = 2920
Score = 173 (66.0 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 42/129 (32%), Positives = 57/129 (44%)
Query: 46 CDTCLPGYFGDALAL------PKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVV 99
C+ CLP Y G P+G C ++ F P C++ +G+C CK
Sbjct: 1856 CE-CLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGECHCKEK-- 1912
Query: 100 GTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNH 159
HY C CDC P GSL+R CDP GQC C+PGV G +C+ C
Sbjct: 1913 ----------HYRPPGSPTCLLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF 1962
Query: 160 YGFSLDGCK 168
+ +GC+
Sbjct: 1963 AEVTTNGCE 1971
>ZFIN|ZDB-GENE-070122-3 [details] [associations]
symbol:celsr3 "cadherin, EGF LAG seven-pass G-type
receptor 3" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IMP] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 ZFIN:ZDB-GENE-070122-3 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007214 GO:GO:0007218
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 EMBL:CR847503
EMBL:CR382331 EMBL:CT027605 IPI:IPI00773917
Ensembl:ENSDART00000078334 Bgee:F1R8J2 Uniprot:F1R8J2
Length = 2916
Score = 171 (65.3 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 82 TPVCDQLTGQCSCKPHV-VGTNCDQ------CEVGHYNIISGEGCKSCDCDPVGSLNRTC 134
+P C G C C T+C++ C+ HY + C CDC PVGS +R+C
Sbjct: 1707 SPTC----GPCHCDASKGFDTDCNKTTGHCHCKEFHYRRRGSDICLPCDCYPVGSFSRSC 1762
Query: 135 DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCK 168
DP +GQC CRPGV G +C +C + GC+
Sbjct: 1763 DPESGQCQCRPGVIGRQCNMCDNPFAEVTQTGCE 1796
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 47/160 (29%), Positives = 59/160 (36%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD---- 104
C PG++G K + CQ P + + C C+ G C
Sbjct: 1645 CEPGFYG------KSCMDACQLN-PCENQAKCHRKPSSSHGYICDCEDSHYGQYCQHRIE 1697
Query: 105 -QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF- 162
QC G + C C CD + C+ TG C C+ E HY
Sbjct: 1698 QQCPRGWWG---SPTCGPCHCDASKGFDTDCNKTTGHCHCK--------EF----HYRRR 1742
Query: 163 SLDGCKPCMCDPIGSNSLQCDP-SGQC---PGVFMNRAEM 198
D C PC C P+GS S CDP SGQC PGV + M
Sbjct: 1743 GSDICLPCDCYPVGSFSRSCDPESGQCQCRPGVIGRQCNM 1782
>UNIPROTKB|Q9HCU4 [details] [associations]
symbol:CELSR2 "Cadherin EGF LAG seven-pass G-type receptor
2" species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0021591 "ventricular system development" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0021999 "neural plate anterior/posterior regionalization"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0022407 "regulation of cell-cell
adhesion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0007156 "homophilic
cell adhesion" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=ISS] [GO:0048813 "dendrite morphogenesis"
evidence=ISS] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS00649 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00008 SMART:SM00112 SMART:SM00179 SMART:SM00181
SMART:SM00208 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0005737 GO:GO:0001764 GO:GO:0006355
GO:GO:0016055 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007283 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0048813 PROSITE:PS01186 GO:GO:0022407
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23
EMBL:AF234887 EMBL:AB065955 EMBL:AL390252 EMBL:D87469
IPI:IPI00015346 RefSeq:NP_001399.1 UniGene:Hs.57652
ProteinModelPortal:Q9HCU4 SMR:Q9HCU4 IntAct:Q9HCU4
MINT:MINT-1395407 STRING:Q9HCU4 MEROPS:I63.002 PhosphoSite:Q9HCU4
DMDM:22095550 PaxDb:Q9HCU4 PRIDE:Q9HCU4 Ensembl:ENST00000271332
GeneID:1952 KEGG:hsa:1952 UCSC:uc001dxa.4 CTD:1952
GeneCards:GC01P109792 HGNC:HGNC:3231 HPA:HPA013952 MIM:604265
neXtProt:NX_Q9HCU4 PharmGKB:PA26394 InParanoid:Q9HCU4 KO:K04601
OMA:YILRAYA ChiTaRS:CELSR2 GenomeRNAi:1952 NextBio:7911 Bgee:Q9HCU4
CleanEx:HS_CELSR2 Genevestigator:Q9HCU4 GermOnline:ENSG00000143126
GO:GO:0021999 Uniprot:Q9HCU4
Length = 2923
Score = 171 (65.3 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
F P C++ +G+C CK + HY C CDC P GSL+R CDP GQ
Sbjct: 1895 FDPDCNKTSGECHCKEN------------HYRPPGSPTCLLCDCYPTGSLSRVCDPEDGQ 1942
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCK 168
C C+PGV G +C+ C + +GC+
Sbjct: 1943 CPCKPGVIGRQCDRCDNPFAEVTTNGCE 1970
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 46/149 (30%), Positives = 60/149 (40%)
Query: 48 TCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNC---- 103
+C PGY+GD D PC+ T + P T C C P+ +G C
Sbjct: 1818 SCDPGYYGDNCT-NVCDLNPCEHQSVCTRKPSA--P--HGYT--CECPPNYLGPYCETRI 1870
Query: 104 DQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGF 162
DQ C G + + C C+CD + C+ +G+C C+ NHY
Sbjct: 1871 DQPCPRGWWGHPT---CGPCNCDVSKGFDPDCNKTSGECHCKE------------NHYRP 1915
Query: 163 -SLDGCKPCMCDPIGSNSLQCDPS-GQCP 189
C C C P GS S CDP GQCP
Sbjct: 1916 PGSPTCLLCDCYPTGSLSRVCDPEDGQCP 1944
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 43/143 (30%), Positives = 58/143 (40%)
Query: 30 TTGDCLKCIYNTG-GPQCD-TCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVC 85
T G C C + G P C+ T + + P G C C CY G+L VC
Sbjct: 1883 TCGPC-NCDVSKGFDPDCNKTSGECHCKENHYRPPGSPTCLLCDCYPTGSLSR-----VC 1936
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK----SCDCDPVGSL--NRTCDPITG 139
D GQC CKP V+G CD+C+ + ++ GC+ SC + RT +
Sbjct: 1937 DPEDGQCPCKPGVIGRQCDRCD-NPFAEVTTNGCEVNYDSCPRAIEAGIWWPRTRFGLPA 1995
Query: 140 QCLCRPGVTGTRCELCQPNHYGF 162
C G GT C H G+
Sbjct: 1996 AAPCPKGSFGTAVRHCD-EHRGW 2017
>UNIPROTKB|E2R4F0 [details] [associations]
symbol:CELSR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0021591 "ventricular system development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001368 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 PRINTS:PR00205 PRINTS:PR00249
PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00179 SMART:SM00181 SMART:SM00208 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
Pfam:PF02210 CTD:1952 KO:K04601 OMA:YILRAYA EMBL:AAEX03004736
RefSeq:XP_537042.2 ProteinModelPortal:E2R4F0
Ensembl:ENSCAFT00000031564 GeneID:479916 KEGG:cfa:479916
NextBio:20855025 Uniprot:E2R4F0
Length = 2926
Score = 171 (65.3 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 33/88 (37%), Positives = 45/88 (51%)
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
F P C++ +G+C CK + HY C CDC P GSL+R CDP GQ
Sbjct: 1898 FDPDCNKTSGECHCKEN------------HYRPPGSPTCLLCDCYPTGSLSRVCDPEDGQ 1945
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCK 168
C C+PGV G +C+ C + +GC+
Sbjct: 1946 CPCKPGVIGRQCDRCDNPFAEVTTNGCE 1973
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 43/143 (30%), Positives = 58/143 (40%)
Query: 30 TTGDCLKCIYNTG-GPQCD-TCLPGYFGDALALPKGD--CEPCQCYIPGTLETETFTPVC 85
T G C C + G P C+ T + + P G C C CY G+L VC
Sbjct: 1886 TCGPC-NCDVSKGFDPDCNKTSGECHCKENHYRPPGSPTCLLCDCYPTGSLSR-----VC 1939
Query: 86 DQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCK----SCDCDPVGSL--NRTCDPITG 139
D GQC CKP V+G CD+C+ + ++ GC+ SC + RT +
Sbjct: 1940 DPEDGQCPCKPGVIGRQCDRCD-NPFAEVTTNGCEVNYDSCPRAIEAGIWWPRTRFGLPA 1998
Query: 140 QCLCRPGVTGTRCELCQPNHYGF 162
C G GT C H G+
Sbjct: 1999 AAPCPRGSFGTAVRHCD-EHRGW 2020
>MGI|MGI:1100883 [details] [associations]
symbol:Celsr1 "cadherin, EGF LAG seven-pass G-type receptor
1 (flamingo homolog, Drosophila)" species:10090 "Mus musculus"
[GO:0001702 "gastrulation with mouth forming second" evidence=NAS]
[GO:0001736 "establishment of planar polarity" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001843 "neural
tube closure" evidence=IGI;IMP] [GO:0001942 "hair follicle
development" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=NAS] [GO:0004930 "G-protein coupled receptor
activity" evidence=NAS] [GO:0005509 "calcium ion binding"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=NAS] [GO:0007166 "cell
surface receptor signaling pathway" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=NAS]
[GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0007266 "Rho protein signal transduction" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=NAS] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0042060 "wound healing" evidence=IGI] [GO:0042249
"establishment of planar polarity of embryonic epithelium"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0045176 "apical protein localization" evidence=IMP] [GO:0046928
"regulation of neurotransmitter secretion" evidence=NAS]
[GO:0046983 "protein dimerization activity" evidence=NAS]
[GO:0048105 "establishment of body hair planar orientation"
evidence=IMP] [GO:0060488 "orthogonal dichotomous subdivision of
terminal units involved in lung branching morphogenesis"
evidence=IMP] [GO:0060489 "planar dichotomous subdivision of
terminal units involved in lung branching morphogenesis"
evidence=IMP] [GO:0060490 "lateral sprouting involved in lung
morphogenesis" evidence=IMP] [GO:0090179 "planar cell polarity
pathway involved in neural tube closure" evidence=IGI] [GO:0090251
"protein localization involved in establishment of planar polarity"
evidence=IDA] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR002126
InterPro:IPR015919 InterPro:IPR017981 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF01825 Pfam:PF02793
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00649
PROSITE:PS00650 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008 SMART:SM00112
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 MGI:MGI:1100883
GO:GO:0001764 GO:GO:0005887 GO:GO:0009952 GO:GO:0004930
GO:GO:0046928 GO:GO:0007218 GO:GO:0005509 GO:GO:0007267
GO:GO:0007626 GO:GO:0007417 GO:GO:0046983 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942
GO:GO:0001702 PROSITE:PS01186 GO:GO:0007266 GO:GO:0001843
eggNOG:NOG12793 GO:GO:0042060 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0032956
GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003
Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170 GO:GO:0045176
Pfam:PF02210 CTD:9620 HOGENOM:HOG000231346 HOVERGEN:HBG050887
KO:K04600 OMA:NKPNIGH OrthoDB:EOG4KKZ23 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 EMBL:AF031572 EMBL:AC116764 EMBL:AC139513
IPI:IPI00127701 PIR:T14119 RefSeq:NP_034016.2 UniGene:Mm.22680
STRING:O35161 PhosphoSite:O35161 PaxDb:O35161 PRIDE:O35161
Ensembl:ENSMUST00000016172 GeneID:12614 KEGG:mmu:12614
UCSC:uc007xdt.1 InParanoid:O35161 NextBio:281774 Bgee:O35161
Genevestigator:O35161 GermOnline:ENSMUSG00000016028 Uniprot:O35161
Length = 3034
Score = 170 (64.9 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 44/141 (31%), Positives = 62/141 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDA------LALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
C++ G C+ C PG++G L PKG C ++ F P C++
Sbjct: 1937 CVRSPNTPRGYSCE-CGPGHYGQYCENKVDLPCPKGWWGNPVCGPCHCAVSQGFDPDCNK 1995
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC CK + +Y + + C CDC P GS +R CD TGQC C+PGV
Sbjct: 1996 TNGQCQCKEN------------YYKPPAQDACLPCDCFPHGSHSRACDMDTGQCACKPGV 2043
Query: 148 TGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2044 IGRQCNRCDNPFAEVTSLGCE 2064
>UNIPROTKB|F1MAS4 [details] [associations]
symbol:F1MAS4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR002126 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008
Pfam:PF00028 Pfam:PF01825 Pfam:PF02793 PRINTS:PR00205
PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS50026 PROSITE:PS50221
PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268 SMART:SM00008
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
InterPro:IPR000152 GO:GO:0016021 GO:GO:0005886 GO:GO:0001764
GO:GO:0009952 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
GO:GO:0007626 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0001942 PROSITE:PS01186
GO:GO:0007266 GO:GO:0001843 GO:GO:0042060 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0032956 GO:GO:0007156 SUPFAM:SSF49313 InterPro:IPR022624
Pfam:PF12003 Gene3D:2.60.40.60 GeneTree:ENSGT00700000104170
GO:GO:0045176 Pfam:PF02210 GO:GO:0048105 GO:GO:0042249
GO:GO:0060490 GO:GO:0060488 GO:GO:0090179 GO:GO:0060489
GO:GO:0090251 IPI:IPI00361486 ProteinModelPortal:F1MAS4
Ensembl:ENSRNOT00000036025 Uniprot:F1MAS4
Length = 3064
Score = 170 (64.9 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 44/141 (31%), Positives = 62/141 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDA------LALPKGDCEPCQCYIPGTLETETFTPVCDQ 87
C++ G C+ C PG++G L PKG C ++ F P C++
Sbjct: 1937 CVRSPNTPRGYSCE-CGPGHYGQYCENKVDLPCPKGWWGNPVCGPCHCAVSQGFDPDCNK 1995
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
GQC CK + +Y + + C CDC P GS +R CD TGQC C+PGV
Sbjct: 1996 TNGQCQCKEN------------YYKPPAQDACLPCDCFPHGSHSRACDMDTGQCACKPGV 2043
Query: 148 TGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 2044 IGRQCNRCDNPFAEVTSLGCE 2064
>MGI|MGI:2449455 [details] [associations]
symbol:Scarf1 "scavenger receptor class F, member 1"
species:10090 "Mus musculus" [GO:0005044 "scavenger receptor
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IDA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=ISO] [GO:0048680 "positive regulation of axon
regeneration" evidence=IMP] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:2449455 GO:GO:0016021 GO:GO:0016358
GO:GO:0016322 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
GO:GO:0048680 GO:GO:0030169 InterPro:IPR009030 SUPFAM:SSF57184
GO:GO:0005044 Pfam:PF12661 GeneTree:ENSGT00690000101691
EMBL:AL591496 eggNOG:NOG284054 HOGENOM:HOG000015093 CTD:8578
HOVERGEN:HBG099941 OMA:GWWGPEC OrthoDB:EOG4S1T6G EMBL:AK220215
EMBL:AK133477 IPI:IPI00380906 RefSeq:NP_001004157.2
UniGene:Mm.10486 ProteinModelPortal:Q5ND28 SMR:Q5ND28 STRING:Q5ND28
PRIDE:Q5ND28 Ensembl:ENSMUST00000042808 GeneID:380713
KEGG:mmu:380713 UCSC:uc007kea.1 InParanoid:Q5ND28 NextBio:401151
Bgee:Q5ND28 Genevestigator:Q5ND28 Uniprot:Q5ND28
Length = 820
Score = 163 (62.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 58/166 (34%), Positives = 71/166 (42%)
Query: 34 CLKCIYN-TGGP---QCDTCLPGYFGDALA--LPKGDC-EPCQCYIPGTLETETFTPVCD 86
C C N T P C++C PG+ G P G E C P E P C
Sbjct: 267 CGHCELNATCSPVTGNCESCKPGWNGTQCKQPCPAGTFGERCTGQCPRCRLGE---P-CQ 322
Query: 87 QLTGQCS-CKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCR 144
TG C C P +G C+ C +G + G+GC S C P + TCD +TG+C+C
Sbjct: 323 AETGHCQHCDPGWLGHRCENPCPLGTF----GKGCSST-C-PACAQG-TCDAVTGECVCS 375
Query: 145 PGVTGTRCELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
G GT C P GF + C PC C P G C P SG C
Sbjct: 376 AGYWGTSCNSSCPA--GFHGNNCSMPCQC-PEGL----CHPVSGTC 414
Score = 163 (62.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 62/184 (33%), Positives = 72/184 (39%)
Query: 31 TGDCLKCIYNTGGPQCD-TCLPGYFGDALALPK-G--DCEPCQCYIPGTLETETFTPV-- 84
TGDC +C N G C+ C G G PK G C+P + P P
Sbjct: 118 TGDC-QCQPNYWGRLCEFPCTCGPHGQCD--PKTGLCHCDP-GWWSPTCRRPCQCNPASR 173
Query: 85 CDQLTGQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSCDCDPV--G-SLNRTCDPITGQ 140
CDQ TG C C P G C C + G C C P G +R C + GQ
Sbjct: 174 CDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSG--RCVCLPGWWGPECSRKCQCVRGQ 231
Query: 141 CL-------CRPGVTGTRCEL-CQPNHYGFSL-DGCKPC----MCDPIGSNSLQCDP--S 185
C C PG G RCEL C P HYG + C C C P+ N C P +
Sbjct: 232 CSVTSGHCSCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWN 291
Query: 186 G-QC 188
G QC
Sbjct: 292 GTQC 295
Score = 153 (58.9 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 58/192 (30%), Positives = 74/192 (38%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPG-YFGDALALPKGDC-EPCQC 70
I +C GP + + V G C +C G QC + PG Y+G DC E C C
Sbjct: 57 IPICEGPDACRKEEVCVKPGLC-RCKPGFFGAQCSSRCPGQYWGH-------DCRETCPC 108
Query: 71 YIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD-QCEVG-HYNIISGEGCKSCDCDPVG 128
+ G C+ TG C C+P+ G C+ C G H G C CDP G
Sbjct: 109 HPRGQ---------CEPATGDCQCQPNYWGRLCEFPCTCGPHGQCDPKTGL--CHCDP-G 156
Query: 129 SLNRTC------------DPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIG 176
+ TC D TG C+C PG G RC H + C+C P G
Sbjct: 157 WWSPTCRRPCQCNPASRCDQATGTCVCPPGWWGRRCSFSCNCHTSPCMQDSGRCVCLP-G 215
Query: 177 SNSLQCDPSGQC 188
+C QC
Sbjct: 216 WWGPECSRKCQC 227
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 55/185 (29%), Positives = 75/185 (40%)
Query: 30 TTGDCLKCIYNTGGPQCDT-CLPGYFGDALALPKGDCE------P----CQCYIPGTLET 78
T+G C C G +C+ C PG++G G CE P C+ PG T
Sbjct: 235 TSGHC-SCPPGFHGIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGT 293
Query: 79 ETFTPVC------DQLTGQCS-CKPHVVGTNCDQCEVGHYNIIS----GEGCKSCDCDPV 127
+ P C ++ TGQC C+ +G C Q E GH G C++ C P+
Sbjct: 294 QCKQP-CPAGTFGERCTGQCPRCR---LGEPC-QAETGHCQHCDPGWLGHRCEN-PC-PL 346
Query: 128 GSLNRTCD---PITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCDP 184
G+ + C P Q C VTG C +C ++G S C C P G + C
Sbjct: 347 GTFGKGCSSTCPACAQGTC-DAVTG-EC-VCSAGYWGTS---CNSS-C-PAGFHGNNCSM 398
Query: 185 SGQCP 189
QCP
Sbjct: 399 PCQCP 403
>UNIPROTKB|E2RM39 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:AAEX03000913
EMBL:AAEX03000914 Ensembl:ENSCAFT00000007776 Uniprot:E2RM39
Length = 2787
Score = 151 (58.2 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 34/93 (36%), Positives = 45/93 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C T G C+ C PG FG+A G C PCQC G + CD L+G
Sbjct: 1176 GFCDECQDWTWGEHCERCRPGSFGNATG--SGGCRPCQCNGHG----DPRRGHCDNLSGL 1229
Query: 92 CSCKPHVVGTNCDQCEVGHY-NIISGEGC-KSC 122
C C+ H G +C C G+Y + +G C + C
Sbjct: 1230 CFCQDHTEGAHCQFCSPGYYGDPRAGGSCFREC 1262
Score = 144 (55.7 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 90 GQCS-CKPHVVGTNCDQCEVGHYNIISGEG-CKSCDCDPVGSLNRT-CDPITGQCLCRPG 146
G C C+ G +C++C G + +G G C+ C C+ G R CD ++G C C+
Sbjct: 1176 GFCDECQDWTWGEHCERCRPGSFGNATGSGGCRPCQCNGHGDPRRGHCDNLSGLCFCQDH 1235
Query: 147 VTGTRCELCQPNHYG 161
G C+ C P +YG
Sbjct: 1236 TEGAHCQFCSPGYYG 1250
Score = 48 (22.0 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 133 TCDPITGQCLCRPGVTGTRC 152
TC+ G C+C G G C
Sbjct: 1460 TCNQSLGVCICAEGFGGPDC 1479
Score = 45 (20.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 133 TCDPITGQCLCRPGVTGTRCELCQ-PNHYGFSLDGCKPCMCDPIGSNS 179
+C P+ +C+ + G TG LC+ P G++ C+ +C P N+
Sbjct: 1413 SC-PVPQECIPQDGATGAG--LCRCPQ--GWAGPHCRMALC-PENCNA 1454
Score = 41 (19.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 14/41 (34%), Positives = 15/41 (36%)
Query: 139 GQCLCRPGVTGTRCE--LCQPNHYGFSLDG-CKP----CMC 172
G C C G G C LC N S G C C+C
Sbjct: 1430 GLCRCPQGWAGPHCRMALCPENCNAHSGAGTCNQSLGVCIC 1470
Score = 40 (19.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 144 RPGVTGTRCELCQPNHYGFSLDGCKPC 170
+P GT LC P FS D PC
Sbjct: 1312 QPCAPGT---LCPPLTLTFSPDSSTPC 1335
Score = 35 (17.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 9/34 (26%), Positives = 11/34 (32%)
Query: 44 PQCDTCLPG-YFGDALALPKGDCEPCQCYIPGTL 76
P+C C P G+C C G L
Sbjct: 574 PECSWCQGACQAAPPPGTPSGECPAASCLGLGRL 607
>RGD|1309330 [details] [associations]
symbol:Scarf1 "scavenger receptor class F, member 1"
species:10116 "Rattus norvegicus" [GO:0005044 "scavenger receptor
activity" evidence=IEA;ISO] [GO:0010976 "positive regulation of
neuron projection development" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA;ISO] [GO:0016322 "neuron remodeling"
evidence=IEA;ISO] [GO:0016358 "dendrite development"
evidence=IEA;ISO] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA;ISO] [GO:0048680 "positive regulation of axon
regeneration" evidence=IEA;ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:1309330 GO:GO:0016021 GO:GO:0016358 GO:GO:0016322
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0048680 GO:GO:0030169 EMBL:CH473948
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 CTD:8578 OrthoDB:EOG4S1T6G
IPI:IPI00781660 RefSeq:NP_001100492.1 UniGene:Rn.224782
Ensembl:ENSRNOT00000056339 GeneID:303313 KEGG:rno:303313
NextBio:651128 Uniprot:D3ZPE8
Length = 823
Score = 162 (62.1 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 55/159 (34%), Positives = 71/159 (44%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALA--LPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG C++C PG+ G P G E C P E P C TG C
Sbjct: 276 CSPVTGN--CESCKPGWNGTQCKQPCPPGTFGERCTGKCPRCRLEE---P-CQVETGHCQ 329
Query: 94 -CKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
C P +G C++ C +G + G+GC S C P + TC+ +TG+C+C G GT
Sbjct: 330 RCDPGWLGHRCEKPCPLGTF----GKGCSST-C-PA-CVQGTCNAVTGECVCSAGYWGTS 382
Query: 152 CELCQPNHYGFSLDGCK-PCMCDPIGSNSLQCDP-SGQC 188
C P+ GF + C PC C P G C P SG C
Sbjct: 383 CNSSCPS--GFHGNNCSMPCQC-PEGL----CHPESGAC 414
Score = 161 (61.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 53/168 (31%), Positives = 70/168 (41%)
Query: 31 TGDCLKCIYNTGGPQC-DTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
TG+C C G QC C PG FG+ G C C+ P C T
Sbjct: 280 TGNCESCKPGWNGTQCKQPCPPGTFGERCT---GKCPRCRLEEP-----------CQVET 325
Query: 90 GQCS-CKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G C C P +G C++ C +G + G+GC S C P + TC+ +TG+C+C G
Sbjct: 326 GHCQRCDPGWLGHRCEKPCPLGTF----GKGCSST-C-PA-CVQGTCNAVTGECVCSAGY 378
Query: 148 TGTRCELCQPNHYGFSLDGCK-PCMCD--------------PIGSNSL 180
GT C P+ GF + C PC C P G N+L
Sbjct: 379 WGTSCNSSCPS--GFHGNNCSMPCQCPEGLCHPESGACQLGPHGKNAL 424
Score = 143 (55.4 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 58/189 (30%), Positives = 69/189 (36%)
Query: 30 TTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLT 89
T G KC TG CD PG++ PCQC L CDQ+T
Sbjct: 137 TCGPHGKCDPKTGLCHCD---PGWWSPTCR------RPCQC---NPLAR------CDQVT 178
Query: 90 GQCSCKPHVVGTNCD-QCEVGHYNIISGEGCKSC-------DCDPVGSLNR-TCDPITGQ 140
G C C G C C + G +C +C R C +G
Sbjct: 179 GACICPTGWWGHRCSFSCNCHTSPCLQDSGRCTCLQGWWGPECSRRCQCVRGQCSVTSGH 238
Query: 141 CLCRPGVTGTRCEL-CQPNHYGF----SLDGCKP-CMCDPIGSNSLQCDP--SG-QC--- 188
C C PG G CEL C+P YG S C+P C P+ N C P +G QC
Sbjct: 239 CSCPPGFQGALCELPCKPGRYGAQCKESCGHCEPNATCSPVTGNCESCKPGWNGTQCKQP 298
Query: 189 --PGVFMNR 195
PG F R
Sbjct: 299 CPPGTFGER 307
Score = 140 (54.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 58/198 (29%), Positives = 77/198 (38%)
Query: 13 ILLCVGPPSDILKSVAGTTGDCLKCIYNTGGPQCDTCLPG-YFG-DALAL----PKGDCE 66
I +C GP + V G C +C G C + PG Y+G D P+G CE
Sbjct: 57 IPICEGPDACKKDEVCVKPGLC-RCKPGFFGAHCSSRCPGQYWGPDCRETCPCHPRGQCE 115
Query: 67 P----CQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCD------QCEVGHYNIISG 116
P CQC + + +C+ C+C PH G CD C+ G ++
Sbjct: 116 PATGVCQC------QPNYWGKLCEF---PCTCGPH--G-KCDPKTGLCHCDPGWWS---- 159
Query: 117 EGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGCKPCMC--- 172
C+ C C+P+ CD +TG C+C G G RC H L C C
Sbjct: 160 PTCRRPCQCNPLAR----CDQVTGACICPTGWWGHRCSFSCNCHTSPCLQDSGRCTCLQG 215
Query: 173 --DPIGSNSLQCDPSGQC 188
P S QC GQC
Sbjct: 216 WWGPECSRRCQC-VRGQC 232
>UNIPROTKB|F1NQD4 [details] [associations]
symbol:F1NQD4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=IEA] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007157 InterPro:IPR002049
Pfam:PF00053 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 EMBL:AADN02043160 EMBL:AADN02043161
IPI:IPI00681360 ProteinModelPortal:F1NQD4
Ensembl:ENSGALT00000033644 OMA:KCENGAS Uniprot:F1NQD4
Length = 342
Score = 155 (59.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 59/179 (32%), Positives = 77/179 (43%)
Query: 31 TGDCLKCIYNTGGPQCDT---CLPGYF----GDALALP--KGD-C-EPCQC--YIPGTL- 76
TG C +C T GP+CD C G G P +G C EPC Y G
Sbjct: 168 TGRC-QCRERTFGPRCDRYCQCYKGKCNQVDGTCTCEPGYRGKYCREPCPAGFYGQGCRR 226
Query: 77 ---ETETFTPVCDQLTGQC-SCKPHVVGTNCDQ-CEVGHYNIISGEGCKSCDCDPVGSLN 131
+ ++ P C G+C +C+ GT CDQ C G Y GEGC+ C P
Sbjct: 227 RCGQCKSLQP-CTVADGRCLTCEAGWNGTKCDQPCSAGFY----GEGCEKL-CPPCKD-G 279
Query: 132 RTCDPITGQCL-CRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
TC+ I G+C C PG G RCE C+ YG + C +C S + +G+C
Sbjct: 280 HTCNHINGKCSHCNPGWIGDRCETKCRNGTYG---ENCA-FVCSDCVSGECHFE-TGRC 333
Score = 133 (51.9 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 42/127 (33%), Positives = 57/127 (44%)
Query: 85 CDQLTGQCSCKPHVVGTNCD---------QCEVGHYNIIS-----GEGCKS-CDCDPVGS 129
CDQ TG+C+C+P+ G C QC+ N + G GC + C C+
Sbjct: 105 CDQKTGKCTCEPNWWGPQCSSSCYCSHNSQCDQQTGNCLCQPGWWGRGCNNQCSCN---- 160
Query: 130 LNRTCDPITGQCLCRPGVTGTRCE-LCQPNHYGF--SLDGCKPCMCDPIGSNSLQC-DPS 185
N C+ TG+C CR G RC+ CQ + G +DG C C+P G C +P
Sbjct: 161 -NSPCEQFTGRCQCRERTFGPRCDRYCQC-YKGKCNQVDGT--CTCEP-GYRGKYCREP- 214
Query: 186 GQCPGVF 192
CP F
Sbjct: 215 --CPAGF 219
Score = 118 (46.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 48/167 (28%), Positives = 62/167 (37%)
Query: 31 TGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPG------TLETETFTPV 84
TG C C N GPQC + G+C CQ PG +
Sbjct: 109 TGKCT-CEPNWWGPQCSSSCYCSHNSQCDQQTGNCL-CQ---PGWWGRGCNNQCSCNNSP 163
Query: 85 CDQLTGQCSCKPHVVGTNCD---QCEVGHYNIISGEGCKSCDCDPVGSLNRTC-DPITGQ 140
C+Q TG+C C+ G CD QC G N + G +C C+P G + C +P
Sbjct: 164 CEQFTGRCQCRERTFGPRCDRYCQCYKGKCNQVDG----TCTCEP-GYRGKYCREP---- 214
Query: 141 CLCRPGVTGT----RCELCQPNHYGFSLDGCKPCMCDPIGSNSLQCD 183
C G G RC C+ DG C+ G N +CD
Sbjct: 215 --CPAGFYGQGCRRRCGQCKSLQPCTVADG--RCLTCEAGWNGTKCD 257
Score = 112 (44.5 bits), Expect = 0.00030, P = 0.00030
Identities = 37/111 (33%), Positives = 48/111 (43%)
Query: 45 QCDTCLPGYFGDALALP--KGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS-CKPHVVG 100
+C TC G+ G P G E C+ P + T C+ + G+CS C P +G
Sbjct: 243 RCLTCEAGWNGTKCDQPCSAGFYGEGCEKLCPPCKDGHT----CNHINGKCSHCNPGWIG 298
Query: 101 TNCD-QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGT 150
C+ +C G Y GE C D V C TG+CLCR G GT
Sbjct: 299 DRCETKCRNGTY----GENCAFVCSDCVSG---ECHFETGRCLCRAGSHGT 342
>ZFIN|ZDB-GENE-050208-404 [details] [associations]
symbol:celsr2l "cadherin, EGF LAG seven-pass G-type
receptor 2, like" species:7955 "Danio rerio" [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR001881 InterPro:IPR017981 Pfam:PF00002 Pfam:PF00008
Pfam:PF01825 PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227
PROSITE:PS50261 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-050208-404 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 InterPro:IPR022624
Pfam:PF12003 GeneTree:ENSGT00700000104170 Pfam:PF02210
EMBL:AL645789 IPI:IPI00502412 Ensembl:ENSDART00000082453
Bgee:F1QT64 Uniprot:F1QT64
Length = 1478
Score = 164 (62.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/139 (33%), Positives = 61/139 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTG-Q 91
C + + G C +C YFG K D PC G ++ P CD G
Sbjct: 449 CSRRSSSAHGYTC-SCPSNYFGQYCE-KKTDL-PCP---RGWWGEKSCGPCNCDTTKGFD 502
Query: 92 CSCKPHVVGTN--CDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C TN C +C+ H+ S + C CDC VGSL+R CD GQC C+PGV G
Sbjct: 503 ADCNK----TNGAC-RCKDNHFRPPSSDTCVLCDCYAVGSLSRVCDRAVGQCQCKPGVIG 557
Query: 150 TRCELCQPNHYGFSLDGCK 168
+C+ C S GC+
Sbjct: 558 RQCDRCDNPFAEVSSSGCE 576
>FB|FBgn0031981 [details] [associations]
symbol:CG7466 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
EMBL:AE014134 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR009030 SUPFAM:SSF57184
HSSP:P35555 Pfam:PF12661 InterPro:IPR011043 SUPFAM:SSF50965
OMA:GHSMVFH FlyBase:FBgn0031981 RefSeq:NP_609180.2 UniGene:Dm.2153
ProteinModelPortal:Q9VLT6 SMR:Q9VLT6 MINT:MINT-1329221
EnsemblMetazoa:FBtr0079541 GeneID:34099 KEGG:dme:Dmel_CG7466
UCSC:CG7466-RA InParanoid:Q9VLT6 PhylomeDB:Q9VLT6 GenomeRNAi:34099
NextBio:786863 ArrayExpress:Q9VLT6 Bgee:Q9VLT6 Uniprot:Q9VLT6
Length = 2898
Score = 159 (61.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 85 CDQLTGQCS-CKPHVVGTNCDQCEVGHY-NIISGEGCKSCDCDPVGSLNR-TCDPITGQC 141
C++ G+C C+ G C++C G Y N + GC C+C+ G+ + C+ G+C
Sbjct: 1272 CNERLGKCDQCQDWSEGEKCERCRQGSYGNATAPHGCLPCECNGHGNQDLGVCNVSNGEC 1331
Query: 142 LCRPGVTGTRCELCQPNHYGFSLDGCKPC--MCDPIG 176
C+ G CELC P +YG G K C C+ G
Sbjct: 1332 YCKDNTQGLNCELCAPGYYGDPRGGGK-CYYQCESRG 1367
Score = 145 (56.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 32 GDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ 91
G C +C + G +C+ C G +G+A A P G C PC+C G + VC+ G+
Sbjct: 1277 GKCDQCQDWSEGEKCERCRQGSYGNATA-PHG-CLPCECNGHGNQDLG----VCNVSNGE 1330
Query: 92 CSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSL 130
C CK + G NC+ C G+Y G G C+ G L
Sbjct: 1331 CYCKDNTQGLNCELCAPGYYGDPRGGGKCYYQCESRGIL 1369
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 23 ILKSVAGTTGDCLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT 82
IL+ CL+C +T G +CD+CL GYF + L K +C PCQC+ G
Sbjct: 2385 ILQEGPAYNATCLRCGNHTAGDRCDSCLTGYFRGSEDLHK-ECRPCQCHGHGN------- 2436
Query: 83 PVCDQLTGQ-CSC 94
+CD +TG+ C+C
Sbjct: 2437 -ICDPVTGEKCNC 2448
Score = 49 (22.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 134 CDPITGQCLCRPGVTGTRCEL--CQPNHYGFSLDG-CKP----CMCDPIGSNSLQC 182
CD +C+C G G CE+ C N + G C C+C C
Sbjct: 1504 CDA-QQRCVCPAGYVGASCEIEICPSNCNAKRMQGFCDTEYGRCICSNANYAGADC 1558
Score = 38 (18.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCEPC 68
C T G C T L + GDC C
Sbjct: 683 CYGRTIGANCTTNLQTTRCPGICPSLGDCHSC 714
>UNIPROTKB|F1NB08 [details] [associations]
symbol:SCARF1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0030169 "low-density lipoprotein
particle binding" evidence=IEA] [GO:0048680 "positive regulation of
axon regeneration" evidence=IEA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 GO:GO:0030169
InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0005044
GeneTree:ENSGT00690000101691 OMA:GWWGPEC EMBL:AADN02025906
IPI:IPI00811359 Ensembl:ENSGALT00000004467 Uniprot:F1NB08
Length = 766
Score = 160 (61.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/159 (32%), Positives = 68/159 (42%)
Query: 37 CIYNTGGPQCDTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQLTGQCSCK 95
C TG C C G++G A C+ C C + G+ C+ L G CSC+
Sbjct: 202 CAQETGN--CK-CKAGFWGSA-------CQWHCNC-VHGS---------CNPLNGYCSCE 241
Query: 96 PHVVGTNC-DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCL-CRPGVTGTRC- 152
P G +C D C G Y C +C ++ C P+ G CL C+PG GT C
Sbjct: 242 PGFQGRSCQDPCPAGTYGSQCVHSCGNC------KHSQPCSPVDGFCLACQPGWNGTLCK 295
Query: 153 ELCQPNHYGFSLDGC-KPCMCDPIGSNSLQCDP-SGQCP 189
E C P +G GC +PC P CD +G CP
Sbjct: 296 ERCTPGFHG---QGCLQPC---PQCRQGDICDAETGSCP 328
Score = 150 (57.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 51/170 (30%), Positives = 71/170 (41%)
Query: 36 KCIYNTGGPQCDTCLPGYFGDALALPKGDCE-PCQCYIPGTLETETFTPVCDQLTGQCSC 94
+C TG +C+ PG++G P DC+ CQC + T CD LTG C C
Sbjct: 141 RCDPTTGACRCE---PGWWG-----P--DCKRQCQCNLA--------TSRCDTLTGHCHC 182
Query: 95 KPHVVGTNCD-QC---------EVGHYNIISG---EGCK-SCDCDPVGSLNRTCDPITGQ 140
+P G C +C E G+ +G C+ C+C ++ +C+P+ G
Sbjct: 183 RPGWWGRKCRFKCSCNLSPCAQETGNCKCKAGFWGSACQWHCNC-----VHGSCNPLNGY 237
Query: 141 CLCRPGVTGTRCE-LCQPNHYG----FSLDGCKPCM-CDPIGSNSLQCDP 184
C C PG G C+ C YG S CK C P+ L C P
Sbjct: 238 CSCEPGFQGRSCQDPCPAGTYGSQCVHSCGNCKHSQPCSPVDGFCLACQP 287
Score = 148 (57.2 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 49/151 (32%), Positives = 68/151 (45%)
Query: 46 CDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFT---PVCDQLTGQCS-CKPHVVGT 101
C C PG+ G L K C P + G L+ +CD TG C C+P G
Sbjct: 282 CLACQPGWNG---TLCKERCTP-GFHGQGCLQPCPQCRQGDICDAETGSCPRCEPGWTGP 337
Query: 102 NCDQ-CEVGHYNIISGEGCKS-C-DCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPN 158
+C+ C G + G+GC+ C +C GS CDP++G CLC+ G G C P
Sbjct: 338 SCNSSCPAGTF----GDGCQLLCPEC-VWGS----CDPVSGDCLCQAGYWGASCNNTCPE 388
Query: 159 HYGFSLDGCKPCMCDPIGSNSLQCDPS-GQC 188
+ F ++ PC C G+ C P+ G C
Sbjct: 389 GF-FGVNCSSPCQCSR-GT----CHPAQGDC 413
Score = 139 (54.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 44/128 (34%), Positives = 57/128 (44%)
Query: 49 CLPGYFGDALALPK-----G-DCEP-CQCYIPGTLETETFTPVCD-QLTGQ-----CSCK 95
C PG+FG + P G DC+ C C+ GT E E+ C+ + G+ C C
Sbjct: 78 CKPGFFGADCSSPCPAQYWGHDCKRRCPCHPGGTCEAESGRCTCNPERWGELCQFRCPCG 137
Query: 96 PHV---VGTNCDQCEVGHYNIISGEGCK-SCDCDPVGSLNRTCDPITGQCLCRPGVTGTR 151
PH T +CE G + G CK C C+ S CD +TG C CRPG G +
Sbjct: 138 PHGRCDPTTGACRCEPGWW----GPDCKRQCQCNLATS---RCDTLTGHCHCRPGWWGRK 190
Query: 152 CEL-CQPN 158
C C N
Sbjct: 191 CRFKCSCN 198
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 34/108 (31%), Positives = 44/108 (40%)
Query: 84 VCDQLTGQCSCKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQC 141
VC + G C CKP G +C C ++ G CK C C P G TC+ +G+C
Sbjct: 69 VCVR-PGLCRCKPGFFGADCSSPCPAQYW----GHDCKRRCPCHPGG----TCEAESGRC 119
Query: 142 LCRPGVTGTRCEL-CQPNHYGFSLDGCKPCMCDPIGSNSLQCDPSGQC 188
C P G C+ C +G C C+P G C QC
Sbjct: 120 TCNPERWGELCQFRCPCGPHGRCDPTTGACRCEP-GWWGPDCKRQCQC 166
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 35/117 (29%), Positives = 47/117 (40%)
Query: 37 CIYNTGGPQCDTCLPGYFGDAL--ALPKGDC-EPCQCYIPGTLETETFTPVCDQLTGQCS 93
C TG C C PG+ G + + P G + CQ P E CD ++G C
Sbjct: 320 CDAETGS--CPRCEPGWTGPSCNSSCPAGTFGDGCQLLCP-----ECVWGSCDPVSGDCL 372
Query: 94 CKPHVVGTNCDQ-CEVGHYNIISGEGCKS-CDCDPVGSLNRTCDPITGQCLCRPGVT 148
C+ G +C+ C G + G C S C C TC P G C+ G+T
Sbjct: 373 CQAGYWGASCNNTCPEGFF----GVNCSSPCQCS-----RGTCHPAQGDCILNTGLT 420
>UNIPROTKB|F1NW88 [details] [associations]
symbol:F1NW88 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005041 "low-density
lipoprotein receptor activity" evidence=IEA] [GO:0005044 "scavenger
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0030169 "low-density lipoprotein particle
binding" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IEA] [GO:0051636 "Gram-negative bacterial cell surface
binding" evidence=IEA] InterPro:IPR000538 InterPro:IPR000742
Pfam:PF00193 PROSITE:PS50026 PROSITE:PS50963 SMART:SM00181
SMART:SM00445 Pfam:PF02469 InterPro:IPR000782 GO:GO:0005737
GO:GO:0005887 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 PROSITE:PS01248
GO:GO:0030169 Gene3D:2.30.180.10 SMART:SM00554 SUPFAM:SSF82153
PROSITE:PS50213 InterPro:IPR009030 SUPFAM:SSF57184 GO:GO:0051636
GO:GO:0005044 GO:GO:0005540 GO:GO:0005041 InterPro:IPR024731
Pfam:PF12947 Gene3D:2.40.155.10 InterPro:IPR023413
GeneTree:ENSGT00690000101914 OMA:IPKCCKG EMBL:AADN02006314
EMBL:AADN02006315 EMBL:AADN02006316 IPI:IPI00592078
Ensembl:ENSGALT00000020806 Uniprot:F1NW88
Length = 2517
Score = 160 (61.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 48/154 (31%), Positives = 65/154 (42%)
Query: 49 CLPGYFG-DALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQCSCKPHVVGTNCDQCE 107
C GYFG D A P G PC + G + + +T TG+C C GT+C+ C
Sbjct: 1920 CCKGYFGPDCQACPGGPETPCNSH--GYCD-DGYTG-----TGECHCYSGFNGTSCELCL 1971
Query: 108 VGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFSLDGC 167
G Y G CK C+C G TG+C C G TG CE N + C
Sbjct: 1972 PGRY----GSSCKPCECKNNGQCEEGYSG-TGRCFCETGWTGRLCE----NKLALT-PVC 2021
Query: 168 KP-CMCDPI--GSNSLQCDPSGQCPGVFMNRAEM 198
P C + + +N+ QC P G+ A++
Sbjct: 2022 SPSCSANAVCMENNTCQCKPLYNGDGITCTAADL 2055
Score = 127 (49.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 44/145 (30%), Positives = 54/145 (37%)
Query: 46 CDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQL--TGQCSCKPHVVGTNC 103
C +C G PK C Y L + C + T +C CK + G +C
Sbjct: 1873 CASCFSGAKCPPGTKPKEGIYRCT-YDSYGLRRDGCRRNCSMVIHTAKC-CKGYF-GPDC 1929
Query: 104 DQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPNHYGFS 163
C G + G CD G TG+C C G GT CELC P YG S
Sbjct: 1930 QACPGGPETPCNSHGY--CDDGYTG---------TGECHCYSGFNGTSCELCLPGRYGSS 1978
Query: 164 LDGCKPCMCDPIGSNSLQCDPSGQC 188
CKPC C G +G+C
Sbjct: 1979 ---CKPCECKNNGQCEEGYSGTGRC 2000
Score = 35 (17.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 18 GPPSDILKSVAGTTGDCLKCIY 39
GP + G +GD +C Y
Sbjct: 1508 GPNQAACNCLKGYSGDGKRCTY 1529
>UNIPROTKB|F1N812 [details] [associations]
symbol:SLC26A6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0007218
"neuropeptide signaling pathway" evidence=IEA] [GO:0008271
"secondary active sulfate transmembrane transporter activity"
evidence=IEA] [GO:0008272 "sulfate transport" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
InterPro:IPR000203 InterPro:IPR000742 InterPro:IPR000832
InterPro:IPR001879 InterPro:IPR001881 InterPro:IPR001902
InterPro:IPR002126 InterPro:IPR011547 InterPro:IPR015919
InterPro:IPR017981 InterPro:IPR017983 InterPro:IPR020894
Pfam:PF00002 Pfam:PF00008 Pfam:PF00028 Pfam:PF00916 Pfam:PF01825
PRINTS:PR00205 PRINTS:PR00249 PROSITE:PS00232 PROSITE:PS00650
PROSITE:PS50026 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50268 SMART:SM00008 SMART:SM00112 SMART:SM00179
SMART:SM00181 SMART:SM00303 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005886 GO:GO:0004930 GO:GO:0007218 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS00010 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0008272 GO:GO:0007156
SUPFAM:SSF49313 InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60
GeneTree:ENSGT00700000104170 Pfam:PF02210 OMA:DGRRVDM GO:GO:0008271
Gene3D:3.30.750.24 InterPro:IPR002645 SUPFAM:SSF52091
PROSITE:PS50801 Pfam:PF01740 TIGRFAMs:TIGR00815 EMBL:AADN02014037
EMBL:AADN02014038 EMBL:AADN02014039 EMBL:AADN02014040
IPI:IPI00594732 Ensembl:ENSGALT00000009205 ArrayExpress:F1N812
Uniprot:F1N812
Length = 3737
Score = 166 (63.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 34/88 (38%), Positives = 43/88 (48%)
Query: 81 FTPVCDQLTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQ 140
F P C++ GQC CK HY + C CDC PVGS +R+C+ TG+
Sbjct: 1707 FDPDCNKTNGQCHCKDF------------HYRPKGSDTCLPCDCYPVGSSSRSCNKETGR 1754
Query: 141 CLCRPGVTGTRCELCQPNHYGFSLDGCK 168
C CRPGV G +C C + GCK
Sbjct: 1755 CHCRPGVIGRQCNSCDSPFAEVTPSGCK 1782
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 44/158 (27%), Positives = 64/158 (40%)
Query: 49 CLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPVCDQLTGQ-----CSCKPHVVGTNC 103
C PGY+G G+C C++ + ++ VC + G C C + G C
Sbjct: 1631 CQPGYYG-------GECVDA-CHL-NPCKNKS---VCRRKPGSPLGYVCECGGNFFGQYC 1678
Query: 104 D-----QCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTGTRCELCQPN 158
+ QC G + C C+CD + C+ GQC C+
Sbjct: 1679 EHRMDQQCPKGWWG---NPSCGPCNCDVSKGFDPDCNKTNGQCHCKDF------------ 1723
Query: 159 HYG-FSLDGCKPCMCDPIGSNSLQCDP-SGQC---PGV 191
HY D C PC C P+GS+S C+ +G+C PGV
Sbjct: 1724 HYRPKGSDTCLPCDCYPVGSSSRSCNKETGRCHCRPGV 1761
>ZFIN|ZDB-GENE-070122-2 [details] [associations]
symbol:celsr2 "cadherin, EGF LAG seven-pass G-type
receptor 2" species:7955 "Danio rerio" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;IDA] [GO:0007166 "cell surface receptor signaling
pathway" evidence=IEA] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IGI;IDA;IMP] [GO:0055113 "epiboly involved in gastrulation
with mouth forming second" evidence=IGI] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=IGI] InterPro:IPR000203 InterPro:IPR000742
InterPro:IPR000832 InterPro:IPR001879 InterPro:IPR001881
InterPro:IPR002126 InterPro:IPR015919 InterPro:IPR017981
InterPro:IPR020894 Pfam:PF00002 Pfam:PF00008 Pfam:PF00028
Pfam:PF01825 PRINTS:PR00205 PROSITE:PS00232 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 PROSITE:PS50268
SMART:SM00112 SMART:SM00179 SMART:SM00181 SMART:SM00303
ZFIN:ZDB-GENE-070122-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0008104
GO:GO:0004930 GO:GO:0007218 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0016337 PROSITE:PS01186
eggNOG:NOG12793 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007156 GO:GO:0055113 SUPFAM:SSF49313
InterPro:IPR022624 Pfam:PF12003 Gene3D:2.60.40.60 Pfam:PF02210
HOGENOM:HOG000231346 HOVERGEN:HBG050887 OrthoDB:EOG4KKZ23 CTD:1952
KO:K04601 GO:GO:0021754 EMBL:AB246774 IPI:IPI00502412
RefSeq:NP_001074046.1 UniGene:Dr.110394 ProteinModelPortal:A0JBX1
STRING:A0JBX1 GeneID:560426 KEGG:dre:560426 InParanoid:A0JBX1
NextBio:20883440 Uniprot:A0JBX1
Length = 2941
Score = 164 (62.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 47/139 (33%), Positives = 61/139 (43%)
Query: 34 CLKCIYNTGGPQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTPV-CDQLTG-Q 91
C + + G C +C YFG K D PC G ++ P CD G
Sbjct: 1911 CSRRSSSAHGYTC-SCPSNYFGQYCE-KKTDL-PCP---RGWWGEKSCGPCNCDTTKGFD 1964
Query: 92 CSCKPHVVGTN--CDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGVTG 149
C TN C +C+ H+ S + C CDC VGSL+R CD GQC C+PGV G
Sbjct: 1965 ADCNK----TNGAC-RCKDNHFRPPSSDTCVLCDCYAVGSLSRVCDRAVGQCQCKPGVIG 2019
Query: 150 TRCELCQPNHYGFSLDGCK 168
+C+ C S GC+
Sbjct: 2020 RQCDRCDNPFAEVSSSGCE 2038
>UNIPROTKB|H9L033 [details] [associations]
symbol:CELSR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007266 "Rho protein signal transduction" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IEA] [GO:0042060 "wound healing" evidence=IEA] [GO:0042249
"establishment of planar polarity of embryonic epithelium"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0045176 "apical protein localization" evidence=IEA] [GO:0048105
"establishment of body hair planar orientation" evidence=IEA]
[GO:0060488 "orthogonal dichotomous subdivision of terminal units
involved in lung branching morphogenesis" evidence=IEA] [GO:0060489
"planar dichotomous subdivision of terminal units involved in lung
branching morphogenesis" evidence=IEA] [GO:0060490 "lateral
sprouting involved in lung morphogenesis" evidence=IEA] [GO:0090179
"planar cell polarity pathway involved in neural tube closure"
evidence=IEA] [GO:0090251 "protein localization involved in
establishment of planar polarity" evidence=IEA] InterPro:IPR000203
InterPro:IPR000742 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR017981 InterPro:IPR017983 Pfam:PF00002 Pfam:PF01825
Pfam:PF02793 PRINTS:PR00249 PROSITE:PS00650 PROSITE:PS50026
PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261 SMART:SM00008
SMART:SM00181 SMART:SM00303 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 GO:GO:0007218 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
InterPro:IPR022624 Pfam:PF12003 GeneTree:ENSGT00700000104170
Pfam:PF02210 EMBL:AADN02048668 EMBL:AADN02048669 EMBL:AADN02048670
EMBL:AADN02048671 EMBL:AADN02048672 EMBL:AADN02048673
Ensembl:ENSGALT00000021853 OMA:SERRWEL Uniprot:H9L033
Length = 1289
Score = 160 (61.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/141 (31%), Positives = 60/141 (42%)
Query: 37 CIYNTGGPQCDTCLPG--YFGDA------LALPKGDCEPCQCYIPGTLETET-FTPVCDQ 87
C++ TC G Y+G L P+G C P ET F P C++
Sbjct: 178 CVHKPSSSHGYTCECGQSYYGQYCESKIDLPCPRGWWGNPICG-PCNCETSKGFDPDCNK 236
Query: 88 LTGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTCDPITGQCLCRPGV 147
G+C CK + +Y S + C CDC P GS R+CD TGQC C+PGV
Sbjct: 237 TNGECHCKAN------------YYRPQSSDTCYPCDCFPSGSHTRSCDMETGQCPCKPGV 284
Query: 148 TGTRCELCQPNHYGFSLDGCK 168
G +C C + GC+
Sbjct: 285 IGRQCNRCDNPFAEVTARGCE 305
>ZFIN|ZDB-GENE-041210-336 [details] [associations]
symbol:stab2 "stabilin 2" species:7955 "Danio
rerio" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR000538
InterPro:IPR000742 Pfam:PF00008 Pfam:PF00193 PROSITE:PS01241
PROSITE:PS50026 PROSITE:PS50963 SMART:SM00181 SMART:SM00445
Pfam:PF02469 InterPro:IPR000782 ZFIN:ZDB-GENE-041210-336
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 PROSITE:PS01248
Gene3D:2.30.180.10 SMART:SM00554 SUPFAM:SSF82153 PROSITE:PS50213
GO:GO:0005540 InterPro:IPR024731 Pfam:PF12947 Gene3D:2.40.155.10
InterPro:IPR023413 GeneTree:ENSGT00690000101914 OrthoDB:EOG4QNMV8
EMBL:CT025718 EMBL:CR383662 IPI:IPI00944354
Ensembl:ENSDART00000136000 Bgee:F6P8Y7 Uniprot:F6P8Y7
Length = 2543
Score = 163 (62.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 58/197 (29%), Positives = 79/197 (40%)
Query: 9 SVMDILLC---VGPPSDILK-SVAGTTGDCLK-CIYNTGGPQCDTCLPGYFG-DALALPK 62
S+MD L VG +L SV C C P+C C GY+G D LA P
Sbjct: 1898 SIMDCPLGSKPVGEQECVLPDSVISRGSKCQSTCKVVVWKPKC--C-SGYYGRDCLACPG 1954
Query: 63 GDCEPCQCYIPGTLETETFTPVCDQL-TGQCSCKPHVVGTNCDQCEVGHYNIISGEGCKS 121
G PC + G + D L G C+C G C+ C GH+ G C +
Sbjct: 1955 GPQSPCSNH--GKCDE-------DHLGNGTCTCDTGFTGVACESCLDGHF----GPDCNA 2001
Query: 122 CDCDPVGSLNRTCDPITGQCLCRPGVTGTRCE-------LCQP--NHYGFSLDGCKPCMC 172
C+C GS + TG C C G TG +CE +C P + G ++ C+C
Sbjct: 2002 CNCTEHGSCDEGLQG-TGSCFCEEGWTGPQCENKLADGPVCNPACHEKGVCMEN-NTCVC 2059
Query: 173 DPI-GSNSLQCDPSGQC 188
P + + C + C
Sbjct: 2060 KPFYEGDGITCTVANMC 2076
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 54/168 (32%), Positives = 68/168 (40%)
Query: 44 PQCDTCLPGYFGDALALPKGDCEPCQCYIPGTLETETFTP-VCDQL---TGQCSCKPHVV 99
PQC C G+FG P DC PC PG T + C + G C C+P
Sbjct: 717 PQC--C-KGFFG-----P--DCSPC----PGGFTTPCSSHGTCSEGIDGNGTCQCEPKFK 762
Query: 100 GTNCDQC-EVGHYNIISGEGC-KSCDCDPVGSLNRTCD--P-ITGQCL---CRPGVTGTR 151
G+ C C + Y G C K+C C ++ TCD P +G+C C+ G TG
Sbjct: 763 GSRCQYCADSNKY----GPNCDKTCWC-----IHGTCDNHPEASGKCKQGSCKDGYTGEY 813
Query: 152 CEL----CQPN-----HYG-FSLDGCKPCMCDP-IGSNSLQCDPSGQC 188
CEL C PN H S G C+C P + C S C
Sbjct: 814 CELQTQPCGPNQPCHAHANCVSNKGAFTCVCKPGFQGDGYMCMESDPC 861
Score = 125 (49.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 44/107 (41%), Positives = 49/107 (45%)
Query: 88 LTGQC--SCKPHVVGTNCDQCEVGHYNIISGEGCKSCDCDPVGSLNRTC-DPI--TGQCL 142
LT C SC+ + C C GHY I + E C + D N C D I TG CL
Sbjct: 1308 LTIGCKFSCEKMTIERIC--CS-GHYGI-NCEKCPGSE-DQSCFGNGICKDGINGTGVCL 1362
Query: 143 CRPGVTGTRCELCQPNHYGFSLDG-CKPCM---C-DPI-GSNSLQCD 183
C G GT CE CQP YG D CK C+ C D I G S CD
Sbjct: 1363 CNQGFNGTACESCQPGKYGIHCDQECK-CVHGRCKDGIDGDGSCACD 1408
Score = 57 (25.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 20 PSDILKSVAGT-TGDCLKCIYN-TGGPQCDTCLPGY--FGDALALPKGD-CEPCQCYIPG 74
P D ++ G T +C+Y+ G C+ CL G+ F + D C+P C+
Sbjct: 270 PIDPCQTNLGNCTSGSTRCVYDGPGKAHCE-CLEGFEKFVEGQGCSIIDLCKPDSCHKYA 328
Query: 75 TLETETFTPVCDQLTGQCSCKPHVVG 100
T T + T +C+C+ +G
Sbjct: 329 TCAT------AEPGTVECNCREGFIG 348
Score = 47 (21.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 37 CIYNTGGPQCD-TCLPGYFGDALALPKGDCEPC-QC 70
CIY G Q D C GY G+ +CEP QC
Sbjct: 918 CIY-VGPGQIDCACKSGYHGNGR-----ECEPVNQC 947
WARNING: HSPs involving 205 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.141 0.494 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 204 204 0.00094 111 3 12 22 0.48 32
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 455
No. of states in DFA: 546 (58 KB)
Total size of DFA: 148 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.28u 0.14s 16.42t Elapsed: 00:00:01
Total cpu time: 16.44u 0.14s 16.58t Elapsed: 00:00:02
Start: Thu Aug 15 12:44:28 2013 End: Thu Aug 15 12:44:30 2013
WARNINGS ISSUED: 2