BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15481
(708 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/386 (53%), Positives = 278/386 (72%), Gaps = 9/386 (2%)
Query: 7 STNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK 66
++N++W + +LG+GAT VF+G +K G+ A+K FN +S +RP DVQMREFEVLKK+
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 67 HENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGM 126
H+NIVKL AIEEE R KV++ME C GSL+ +L++P N YGL E EFL+VL + GM
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
HLR+N +VHR++KPGNIM+ I +DG ++YKLTDFGAARELE+D+QF+SLYGTEEYLHPD
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY-GGRRNKETMYYITTKKAS 245
MYERAVLRK K +GATVDLWSIGVT YH ATG+LPFRP+ G RRNKE MY I T K S
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 246 GVISGTQTSENGEIDWCTDLPNNCQLSLGLKKLVTPILAGLLEVDSKKIWSFERFFSEVT 305
G ISG Q +ENG IDW D+P +C LS GL+ L+TP+LA +LE D +K W F++FF+E +
Sbjct: 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305
Query: 306 KTLNRKLVHLFHINRLQCIRIYLHPDDAYDQLQDLIQEQTDVTPNKQILLYKN------- 358
L+R ++H+F + ++ +IY+H + +L+ +QT + + Q L+Y+
Sbjct: 306 DILHRMVIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEP 365
Query: 359 THFSHIFPSSHQKNPSSYSVSVENDA 384
+ FP + ++NP + VS E ++
Sbjct: 366 GRLAQHFPKTTEENP-IFVVSREGNS 390
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 236/305 (77%), Gaps = 1/305 (0%)
Query: 7 STNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK 66
++N++W + +LG+GAT VF+G +K G+ A+K FN +S +RP DVQMREFEVLKK+
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65
Query: 67 HENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGM 126
H+NIVKL AIEEE R KV++ME C GSL+ +L++P N YGL E EFL+VL + GM
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
HLR+N +VHR++KPGNIM+ I +DG ++YKLTDFGAARELE+D+QF+ LYGTEEYLHPD
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY-GGRRNKETMYYITTKKAS 245
MYERAVLRK K +GATVDLWSIGVT YH ATG+LPFRP+ G RRNKE MY I T K S
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 246 GVISGTQTSENGEIDWCTDLPNNCQLSLGLKKLVTPILAGLLEVDSKKIWSFERFFSEVT 305
G ISG Q +ENG IDW D+P +C LS GL+ L+TP+LA +LE D +K W F++FF+E +
Sbjct: 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305
Query: 306 KTLNR 310
L+R
Sbjct: 306 DILHR 310
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 26/251 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG G G V + ++++ GE VA+K Q + + E +++KK+ H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 72 KLLAIEEEQEGRGKV-------IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ E +G K+ + ME C GG L L+ EN GL+E +L +++
Sbjct: 77 ---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +NR++HRDLKP NI+ I+K+ D G A+EL++ + GT +YL
Sbjct: 134 ALRYLHENRIIHRDLKPENIV-LQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP-------YGGRRNKETMY 237
P++ E+ K + TVD WS G + TG PF P +G R K +
Sbjct: 193 PELLEQ--------KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEH 244
Query: 238 YITTKKASGVI 248
+ +G +
Sbjct: 245 IVVYDDLTGAV 255
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 26/251 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG G G V + ++++ GE VA+K Q + + E +++KK+ H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 72 KLLAIEEEQEGRGKV-------IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ E +G K+ + ME C GG L L+ EN GL+E +L +++
Sbjct: 76 ---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +NR++HRDLKP NI+ I+K+ D G A+EL++ + GT +YL
Sbjct: 133 ALRYLHENRIIHRDLKPENIV-LQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP-------YGGRRNKETMY 237
P++ E+ K + TVD WS G + TG PF P +G R K +
Sbjct: 192 PELLEQ--------KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEH 243
Query: 238 YITTKKASGVI 248
+ +G +
Sbjct: 244 IVVYDDLTGAV 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 18/209 (8%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLG GA VF + G+ A+K + R ++ E VLKK+KHENIV L I
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE-NEIAVLKKIKHENIVTLEDI 74
Query: 77 EEEQEGRGKVIVMELCTGGSLFN-ILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E +VM+L +GG LF+ IL+ T E++ LV++ + + +K+L +N +V
Sbjct: 75 YESTTHY--YLVMQLVSGGELFDRILERGVYT----EKDASLVIQQVLSAVKYLHENGIV 128
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRDLKP N++ ++ S I +TDFG ++ +E++ + GT Y+ P++ + +K
Sbjct: 129 HRDLKPENLLYLTPEENSKI-MITDFGLSK-MEQNGIMSTACGTPGYVAPEV----LAQK 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P K VD WSIGV Y + G PF
Sbjct: 183 PYSK----AVDCWSIGVITYILLCGYPPF 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 13/223 (5%)
Query: 3 FLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL 62
+ +G+ + ++ LG GA G V +++G +KT N+ P + E EVL
Sbjct: 15 YFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVL 74
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFN-ILDDPENTYGLQEEEFLLVLEH 121
K + H NI+K+ + E+ IVME C GG L I+ L E +++
Sbjct: 75 KSLDHPNIIKIFEVFEDY--HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE 181
+ + + +VH+DLKP NI+ S I K+ DFG A + D+ + GT
Sbjct: 133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPI-KIIDFGLAELFKSDEHSTNAAGTAL 191
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y+ P++++R V K D+WS GV +Y + TG LPF
Sbjct: 192 YMAPEVFKRDVTFK---------CDIWSAGVVMYFLLTGCLPF 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQ--LSHMR---PHDVQMREFEVLKKVKHENIVK 72
LG G V + K G+ A K + LS R + RE +L++++H NI+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L I E + V+++EL +GG LF+ L + E+ L E+E L+ + G+ +L
Sbjct: 80 LHDIFENK--TDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSK 134
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R+ H DLKP NIM + + KL DFG A ++E +F +++GT E++ P++ V
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI----V 190
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+P+ G D+WSIGV Y + +G PF G +ET+ I+
Sbjct: 191 NYEPL----GLEADMWSIGVITYILLSGASPFL---GETKQETLTNISA 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQ--LSHMR---PHDVQMREFEVLKKVKHENIVK 72
LG G V + K G+ A K + LS R + RE +L++++H NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L I E + V+++EL +GG LF+ L + E+ L E+E L+ + G+ +L
Sbjct: 73 LHDIFENKTD--VVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSK 127
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R+ H DLKP NIM + + KL DFG A ++E +F +++GT E++ P++ V
Sbjct: 128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI----V 183
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+P+ G D+WSIGV Y + +G PF G +ET+ I+
Sbjct: 184 NYEPL----GLEADMWSIGVITYILLSGASPFL---GETKQETLTNISA 225
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 16/185 (8%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +L++++H NI+ L I E + V+++EL +GG LF+ L + E+ L E+E
Sbjct: 78 REVNILREIRHPNIITLHDIFENK--TDVVLILELVSGGELFDFLAEKES---LTEDEAT 132
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
L+ + G+ +L R+ H DLKP NIM + + KL DFG A ++E +F ++
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 192
Query: 177 YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
+GT E++ P++ V +P+ G D+WSIGV Y + +G PF G +ET+
Sbjct: 193 FGTPEFVAPEI----VNYEPL----GLEADMWSIGVITYILLSGASPFL---GETKQETL 241
Query: 237 YYITT 241
I+
Sbjct: 242 TNISA 246
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 20/187 (10%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +L++V H N++ L + E + V+++EL +GG LF+ L E+ L EEE
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKES---LSEEEAT 118
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFM 174
++ + G+ +L ++ H DLKP NIM + D I KL DFG A E+E+ +F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIM--LLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 175 SLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
+++GT E++ P++ V +P+ G D+WSIGV Y + +G PF G +E
Sbjct: 177 NIFGTPEFVAPEI----VNYEPL----GLEADMWSIGVITYILLSGASPFL---GDTKQE 225
Query: 235 TMYYITT 241
T+ IT+
Sbjct: 226 TLANITS 232
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +L++V H NI+ L + E + V+++EL +GG LF+ L E+ L EEE
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTD--VVLILELVSGGELFDFLAQKES---LSEEEAT 118
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFM 174
++ + G+ +L ++ H DLKP NIM + D I KL DFG A E+E+ +F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIM--LLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 175 SLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
+++GT E++ P++ L G D+WSIGV Y + +G PF G +E
Sbjct: 177 NIFGTPEFVAPEIVNYEPL--------GLEADMWSIGVITYILLSGASPFL---GDTKQE 225
Query: 235 TMYYITT 241
T+ IT
Sbjct: 226 TLANITA 232
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 20/187 (10%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +L++V H N++ L + E + V+++EL +GG LF+ L E+ L EEE
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKES---LSEEEAT 118
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFM 174
++ + G+ +L ++ H DLKP NIM + D I KL DFG A E+E+ +F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIM--LLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 175 SLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
+++GT E++ P++ V +P+ G D+WSIGV Y + +G PF G +E
Sbjct: 177 NIFGTPEFVAPEI----VNYEPL----GLEADMWSIGVITYILLSGASPFL---GDTKQE 225
Query: 235 TMYYITT 241
T+ IT+
Sbjct: 226 TLANITS 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 20/187 (10%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +L++V H N++ L + E + V+++EL +GG LF+ L E+ L EEE
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKES---LSEEEAT 118
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFM 174
++ + G+ +L ++ H DLKP NIM + D I KL DFG A E+E+ +F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIM--LLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 175 SLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
+++GT E++ P++ V +P+ G D+WSIGV Y + +G PF G +E
Sbjct: 177 NIFGTPEFVAPEI----VNYEPL----GLEADMWSIGVITYILLSGASPFL---GDTKQE 225
Query: 235 TMYYITT 241
T+ IT
Sbjct: 226 TLANITA 232
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 3 FLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHM-RPHDVQMREFEV 61
+ +G+ + +LGKG+ G V + ++ + AVK N+ S + +RE E+
Sbjct: 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVEL 74
Query: 62 LKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEH 121
LKK+ H NI+KL I E+ IV EL TGG LF D+ E + +++
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELF---DEIIKRKRFSEHDAARIIKQ 129
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIM----KFICDDGSTIYKLTDFGAARELEEDQQFMSLY 177
+ +G+ ++ + +VHRDLKP NI+ + CD K+ DFG + +++ +
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCD-----IKIIDFGLSTCFQQNTKMKDRI 184
Query: 178 GTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYG 228
GT Y+ P+ VLR T+ D+WS GV LY + +G PF YG
Sbjct: 185 GTAYYIAPE-----VLR----GTYDEKCDVWSAGVILYILLSGTPPF--YG 224
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 20/187 (10%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +L++V H N++ L + E + V+++EL +GG LF+ L E+ L EEE
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKES---LSEEEAT 118
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFM 174
++ + G+ +L ++ H DLKP NIM + D I KL DFG A E+E+ +F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIM--LLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 175 SLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
+++GT E++ P++ V +P+ G D+WSIGV Y + +G PF G +E
Sbjct: 177 NIFGTPEFVAPEI----VNYEPL----GLEADMWSIGVITYILLSGASPFL---GDTKQE 225
Query: 235 TMYYITT 241
T+ IT+
Sbjct: 226 TLANITS 232
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 20/187 (10%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +L++V H N++ L + E + V+++EL +GG LF+ L E+ L EEE
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR--TDVVLILELVSGGELFDFLAQKES---LSEEEAT 118
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFM 174
++ + G+ +L ++ H DLKP NIM + D I KL DFG A E+E+ +F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIM--LLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
Query: 175 SLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
+++GT E++ P++ V +P+ G D+WSIGV Y + +G PF G +E
Sbjct: 177 NIFGTPEFVAPEI----VNYEPL----GLEADMWSIGVITYILLSGASPFL---GDTKQE 225
Query: 235 TMYYITT 241
T+ IT
Sbjct: 226 TLANITA 232
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 18/227 (7%)
Query: 3 FLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHM-RPHDVQMREFEV 61
+ +G+ + +LGKG+ G V + ++ + AVK N+ S + +RE E+
Sbjct: 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVEL 74
Query: 62 LKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEH 121
LKK+ H NI+KL I E+ IV EL TGG LF D+ E + +++
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELF---DEIIKRKRFSEHDAARIIKQ 129
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE 181
+ +G+ ++ + +VHRDLKP NI+ + I K+ DFG + +++ + GT
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYG 228
Y+ P+ VLR T+ D+WS GV LY + +G PF YG
Sbjct: 189 YIAPE-----VLR----GTYDEKCDVWSAGVILYILLSGTPPF--YG 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 18/227 (7%)
Query: 3 FLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHM-RPHDVQMREFEV 61
+ +G+ + +LGKG+ G V + ++ + AVK N+ S + +RE E+
Sbjct: 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVEL 74
Query: 62 LKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEH 121
LKK+ H NI+KL I E+ IV EL TGG LF D+ E + +++
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELF---DEIIKRKRFSEHDAARIIKQ 129
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE 181
+ +G+ ++ + +VHRDLKP NI+ + I K+ DFG + +++ + GT
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDI-KIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYG 228
Y+ P+ VLR T+ D+WS GV LY + +G PF YG
Sbjct: 189 YIAPE-----VLR----GTYDEKCDVWSAGVILYILLSGTPPF--YG 224
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL- 74
LGKGA V + + G+ A K N +LS R H RE + + +KH NIV+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+I EE +V +L TGG LF D Y E + ++ + + H N +
Sbjct: 71 SISEEG---FHYLVFDLVTGGELFE--DIVAREY-YSEADASHCIQQILESVNHCHLNGI 124
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-FMSLYGTEEYLHPDMYERAVL 193
VHRDLKP N++ G+ + KL DFG A E++ DQQ + GT YL P+ VL
Sbjct: 125 VHRDLKPENLLLASKSKGAAV-KLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-----VL 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
RK +G VD+W+ GV LY + G PF
Sbjct: 179 RK---DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL- 74
LGKGA V + + G+ A K N +LS R H RE + + +KH NIV+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+I EE +V +L TGG LF D Y E + ++ + + H N +
Sbjct: 71 SISEEG---FHYLVFDLVTGGELFE--DIVAREY-YSEADASHCIQQILESVNHCHLNGI 124
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-FMSLYGTEEYLHPDMYERAVL 193
VHRDLKP N++ G+ + KL DFG A E++ DQQ + GT YL P+ VL
Sbjct: 125 VHRDLKPENLLLASKSKGAAV-KLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-----VL 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
RK +G VD+W+ GV LY + G PF
Sbjct: 179 RK---DPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL-AI 76
LG GA G V + + G A K F H + +E + + ++H +V L A
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAK-FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
E++ E V++ E +GG LF + D N + E+E + + + G+ H+ +N VH
Sbjct: 118 EDDNE---MVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHENNYVH 172
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DLKP NIM S KL DFG L+ Q GT E+ P++ E
Sbjct: 173 LDLKPENIM--FTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE------- 223
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
GK G D+WS+GV Y + +G P+GG + ET+
Sbjct: 224 -GKPVGYYTDMWSVGVLSYILLSG---LSPFGGENDDETL 259
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL-AI 76
LG GA G V + + G A K F H + +E + + ++H +V L A
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAK-FVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
E++ E V++ E +GG LF + D N + E+E + + + G+ H+ +N VH
Sbjct: 224 EDDNE---MVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHENNYVH 278
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DLKP NIM S KL DFG L+ Q GT E+ P++ E
Sbjct: 279 LDLKPENIM--FTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE------- 329
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
GK G D+WS+GV Y + +G P+GG + ET+
Sbjct: 330 -GKPVGYYTDMWSVGVLSYILLSG---LSPFGGENDDETL 365
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL- 74
LGKGA V + V K + A K N +LS R H RE + + +KH NIV+L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+I EE +V +L TGG LF + E E + + + + H+ + +
Sbjct: 98 SISEEG---FHYLVFDLVTGGELFEDIVAREY---YSEADASHCIHQILESVNHIHQHDI 151
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-FMSLYGTEEYLHPDMYERAVL 193
VHRDLKP N++ G+ + KL DFG A E++ +QQ + GT YL P+ VL
Sbjct: 152 VHRDLKPENLLLASKCKGAAV-KLADFGLAIEVQGEQQAWFGFAGTPGYLSPE-----VL 205
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
RK +G VD+W+ GV LY + G PF
Sbjct: 206 RK---DPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
LGKGA V + V+K G A K N + D Q RE + +K++H NIV+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLH- 71
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ QE +V +L TGG LF +D E + ++ + + + N +V
Sbjct: 72 -DSIQEESFHYLVFDLVTGGELF---EDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HR+LKP N++ G+ + KL DFG A E+ + + + GT YL P++ ++ K
Sbjct: 128 HRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P VD+W+ GV LY + G PF
Sbjct: 187 P--------VDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
LGKGA V + V+K G A K N + D Q RE + +K++H NIV+L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLH- 70
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ QE +V +L TGG LF +D E + ++ + + + N +V
Sbjct: 71 -DSIQEESFHYLVFDLVTGGELF---EDIVAREFYSEADASHCIQQILESIAYCHSNGIV 126
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HR+LKP N++ G+ + KL DFG A E+ + + + GT YL P++ ++ K
Sbjct: 127 HRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P VD+W+ GV LY + G PF
Sbjct: 186 P--------VDIWACGVILYILLVGYPPF 206
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL- 74
LGKGA V + V G+ A K N +LS R H RE + + +KH NIV+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+I EE ++ +L TGG LF D Y E + ++ + + H +
Sbjct: 89 SISEEGH---HYLIFDLVTGGELFE--DIVAREY-YSEADASHCIQQILEAVLHCHQMGV 142
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-FMSLYGTEEYLHPDMYERAVL 193
VHRDLKP N++ G+ + KL DFG A E+E +QQ + GT YL P+ VL
Sbjct: 143 VHRDLKPENLLLASKLKGAAV-KLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-----VL 196
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
RK +G VDLW+ GV LY + G PF
Sbjct: 197 RK---DPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL- 74
+GKGA V + V G A K N +LS R H RE + + +KH NIV+L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLS-ARDHQKLEREARICRLLKHSNIVRLHD 70
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+I EE +V +L TGG LF D Y E + ++ + + H +
Sbjct: 71 SISEEG---FHYLVFDLVTGGELFE--DIVAREY-YSEADASHCIQQILEAVLHCHQMGV 124
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-FMSLYGTEEYLHPDMYERAVL 193
VHRDLKP N++ G+ + KL DFG A E++ DQQ + GT YL P+ VL
Sbjct: 125 VHRDLKPENLLLASKCKGAAV-KLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-----VL 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
RK + +G VD+W+ GV LY + G PF
Sbjct: 179 RK---EAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ L G D+WSIGV Y + +G PF
Sbjct: 187 EIVNYEPL--------GLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
LGKGA V + V+K G A K N + D Q RE + +K++H NIV+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLH- 71
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ QE +V +L TGG LF +D E + ++ + + + N +V
Sbjct: 72 -DSIQEESFHYLVFDLVTGGELF---EDIVAREFYSEADASHCIQQILESIAYCHSNGIV 127
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HR+LKP N++ G+ + KL DFG A E+ + + + GT YL P++ ++ K
Sbjct: 128 HRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P VD+W+ GV LY + G PF
Sbjct: 187 P--------VDIWACGVILYILLVGYPPF 207
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 70
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 71 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 125
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ L G D+WSIGV Y + +G PF
Sbjct: 186 EIVNYEPL--------GLEADMWSIGVITYILLSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 70
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 71 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 125
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 186 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
LGKGA V + V+K G A K N + D Q RE + +K++H NIV+L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLH- 94
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ QE +V +L TGG LF +D E + ++ + + + N +V
Sbjct: 95 -DSIQEESFHYLVFDLVTGGELF---EDIVAREFYSEADASHCIQQILESIAYCHSNGIV 150
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HR+LKP N++ G+ + KL DFG A E+ + + + GT YL P++ ++ K
Sbjct: 151 HRNLKPENLLLASKAKGAAV-KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P VD+W+ GV LY + G PF
Sbjct: 210 P--------VDIWACGVILYILLVGYPPF 230
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ L G D+WSIGV Y + +G PF
Sbjct: 187 EIVNYEPL--------GLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 13/168 (7%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE +LK+++H N++ L + E + ++++EL GG LF+ L + E+ L EEE
Sbjct: 63 REVSILKEIQHPNVITLHEVYENK--TDVILILELVAGGELFDFLAEKES---LTEEEAT 117
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
L+ + G+ +L ++ H DLKP NIM + K+ DFG A +++ +F ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 177 YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+GT E++ P++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 178 FGTPEFVAPEI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 24/239 (10%)
Query: 5 RGSTN--YVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL 62
+G+ N Y T +LG G G V + G +A K + M+ + E V+
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKII-KTRGMKDKEEVKNEISVM 140
Query: 63 KKVKHENIVKLL-AIEEEQEGRGKVIVMELCTGGSLFN-ILDDPENTYGLQEEEFLLVLE 120
++ H N+++L A E + + V+VME GG LF+ I+D+ +Y L E + +L ++
Sbjct: 141 NQLDHANLIQLYDAFESKND---IVLVMEYVDGGELFDRIIDE---SYNLTELDTILFMK 194
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE 180
+ G++H+ ++H DLKP NI+ + D I K+ DFG AR + ++ +GT
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENIL-CVNRDAKQI-KIIDFGLARRYKPREKLKVNFGTP 252
Query: 181 EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
E+L P++ + P D+WS+GV Y + +G P+ G + ET+ I
Sbjct: 253 EFLAPEVVNYDFVSFP--------TDMWSVGVIAYMLLSG---LSPFLGDNDAETLNNI 300
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG+GAT V++ K +P A+K + + + E VL ++ H NI+KL
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK---IVRTEIGVLLRLSHPNIIKLKE 115
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
I E +V+EL TGG LF+ + E Y E + ++ + + +L +N +V
Sbjct: 116 IFETPTEIS--LVLELVTGGELFDRI--VEKGY-YSERDAADAVKQILEAVAYLHENGIV 170
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRDLKP N++ + K+ DFG ++ +E ++ GT Y P+ +LR
Sbjct: 171 HRDLKPENLL-YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPE-----ILR- 223
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMY 237
G +G VD+WS+G+ Y + G F P+ R + M+
Sbjct: 224 --GCAYGPEVDMWSVGIITYILLCG---FEPFYDERGDQFMF 260
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLGKG G V+ G + +N +A+K + + E + K +KH+NIV+ L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGS 87
Query: 77 EEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E G + I ME GGSL +L E+ + + G+K+L DN++V
Sbjct: 88 FSEN---GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVLR 194
HRD+K N++ + S + K++DFG ++ L + GT +Y+ P++ ++
Sbjct: 145 HRDIKGDNVL---INTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG--- 198
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYG 228
P G +G D+WS+G T+ +ATG PF G
Sbjct: 199 -PRG--YGKAADIWSLGCTIIEMATGKPPFYELG 229
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G VAVK ++ + + P +Q RE ++K + H NIVKL
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDK-TQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +VME +GG +F+ L +G ++E+E + + +++ +
Sbjct: 82 VIETE--KTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ DG K+ DFG + E + + G+ Y P++++
Sbjct: 136 VHRDLKAENLLL----DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQ----- 186
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 187 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + ++++EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT ++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLG GA V +K + VA+K + + E VL K+KH NIV L I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
E G ++M+L +GG LF+ + E + + + L+ + L A +K+L D +VH
Sbjct: 85 YES--GGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDA-VKYLHDLGIVH 139
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
RDLKP N++ + D+ S I ++DFG ++ + + GT Y+ P++ + +KP
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLSKMEDPGSVLSTACGTPGYVAPEV----LAQKP 194
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K VD WSIGV Y + G PF
Sbjct: 195 YSK----AVDCWSIGVIAYILLCGYPPF 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 23/218 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVLKKVKHENI 70
W LG+GA G V VN+ E VAVK + + P +++ +E + K + HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEIXINKMLNHENV 66
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
VK +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 67 VKFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDM 187
+ HRD+KP N++ D+ + K++DFG A R ++ + GT Y+ P++
Sbjct: 122 GIGITHRDIKPENLL---LDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 188 YERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 178 LKR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 23/218 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVLKKVKHENI 70
W LG+GA G V VN+ E VAVK + + P +++ +E + K + HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEIXINKMLNHENV 67
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
VK +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 68 VKFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDM 187
+ HRD+KP N++ D+ + K++DFG A R ++ + GT Y+ P++
Sbjct: 123 GIGITHRDIKPENLL---LDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 188 YERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 LKR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLG GA V +K + VA+K + + E VL K+KH NIV L I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
E G ++M+L +GG LF+ + E + + + L+ + L A +K+L D +VH
Sbjct: 85 YES--GGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDA-VKYLHDLGIVH 139
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
RDLKP N++ + D+ S I ++DFG ++ + + GT Y+ P++ + +KP
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLSKMEDPGSVLSTACGTPGYVAPEV----LAQKP 194
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K VD WSIGV Y + G PF
Sbjct: 195 YSK----AVDCWSIGVIAYILLCGYPPF 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVLKKVKHENI 70
W LG+GA G V VN+ E VAVK + + P +++ +E + K + HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEIXINKMLNHENV 66
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
VK +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 67 VKFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDM 187
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 122 GIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 188 YERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 178 LKR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 9 NYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE 68
N VW LG GA G V++ NK G A K S D + E E+L H
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY-IVEIEILATCDHP 76
Query: 69 NIVKLLAIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
IVKLL GK+ I++E C GG++ I+ E GL E + +V + +
Sbjct: 77 YIVKLLGAYYHD---GKLWIMIEFCPGGAVDAIML--ELDRGLTEPQIQVVCRQMLEALN 131
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPD 186
L R++HRDLK GN++ + D +L DFG +A+ L+ Q+ S GT ++ P+
Sbjct: 132 FLHSKRIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ ++ + D+WS+G+TL +A P
Sbjct: 188 VVMCETMKD---TPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 68 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 123 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLGKG G V+ G + +N +A+K + + E + K +KH+NIV+ L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGS 73
Query: 77 EEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E G + I ME GGSL +L E+ + + G+K+L DN++V
Sbjct: 74 FSEN---GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVLR 194
HRD+K N++ + S + K++DFG ++ L + GT +Y+ P++ ++
Sbjct: 131 HRDIKGDNVL---INTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG--- 184
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYG 228
P G +G D+WS+G T+ +ATG PF G
Sbjct: 185 -PRG--YGKAADIWSLGCTIIEMATGKPPFYELG 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLG GA V +K + VA+K + + E VL K+KH NIV L I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
E G ++M+L +GG LF+ + E + + + L+ + L A +K+L D +VH
Sbjct: 85 YES--GGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDA-VKYLHDLGIVH 139
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
RDLKP N++ + D+ S I ++DFG ++ + + GT Y+ P++ + +KP
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLSKMEDPGSVLSTACGTPGYVAPEV----LAQKP 194
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K VD WSIGV Y + G PF
Sbjct: 195 YSK----AVDCWSIGVIAYILLCGYPPF 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 9 NYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE 68
N VW LG GA G V++ NK G A K S D + E E+L H
Sbjct: 10 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY-IVEIEILATCDHP 68
Query: 69 NIVKLLAIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
IVKLL GK+ I++E C GG++ I+ E GL E + +V + +
Sbjct: 69 YIVKLLGAYYHD---GKLWIMIEFCPGGAVDAIML--ELDRGLTEPQIQVVCRQMLEALN 123
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPD 186
L R++HRDLK GN++ + D +L DFG +A+ L+ Q+ S GT ++ P+
Sbjct: 124 FLHSKRIIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ ++ + D+WS+G+TL +A P
Sbjct: 180 VVMCETMKD---TPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLG GA V +K + VA+K + + E VL K+KH NIV L I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
E G ++M+L +GG LF+ + E + + + L+ + L A +K+L D +VH
Sbjct: 85 YES--GGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDA-VKYLHDLGIVH 139
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
RDLKP N++ + D+ S I ++DFG ++ + + GT Y+ P++ + +KP
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLSKMEDPGSVLSTACGTPGYVAPEV----LAQKP 194
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K VD WSIGV Y + G PF
Sbjct: 195 YSK----AVDCWSIGVIAYILLCGYPPF 218
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 23/218 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN---------QLSHMRPHDVQMREFEVLKKVK- 66
V+G+G + V + V++ G AVK QL +R + RE +L++V
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR--EATRRETHILRQVAG 158
Query: 67 HENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGM 126
H +I+ L I+ + +V +L G LF+ L + L E+E ++ L +
Sbjct: 159 HPHIITL--IDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAV 213
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
L N +VHRDLKP NI+ DD I +L+DFG + LE ++ L GT YL P+
Sbjct: 214 SFLHANNIVHRDLKPENIL---LDDNMQI-RLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + ++ G +G VDLW+ GV L+ + G+ PF
Sbjct: 270 ILKCSMDETHPG--YGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK------TFNQLSHMRPHDVQMREFEVLKKV 65
+ T LG G V + K+ G A K T + + D++ RE +LK++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEI 71
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+H N++ L + E + +++ EL GG LF+ L + E+ L EEE L+ + G
Sbjct: 72 QHPNVITLHEVYENK--TDVILIGELVAGGELFDFLAEKES---LTEEEATEFLKQILNG 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+ +L ++ H DLKP NIM + K+ DFG A +++ +F +++GT E++ P
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ V +P+ G D+WSIGV Y + +G PF
Sbjct: 187 EI----VNYEPL----GLEADMWSIGVITYILLSGASPF 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVLKKVKHENI 70
W LG+GA G V VN+ E VAVK + + P +++ +E + K + HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEICINKMLNHENV 66
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
VK +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 67 VKFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDM 187
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 122 GIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 188 YERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 178 LKR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 23/218 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVLKKVKHENI 70
W LG+GA G V VN+ E VAVK + + P +++ +E + K + HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEICINKMLNHENV 66
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
VK +EG + + +E C+GG LF D E G+ E + L AG+ +L
Sbjct: 67 VKFYG--HRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDM 187
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 122 GIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 188 YERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 178 LKR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 23/218 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVLKKVKHENI 70
W LG+GA G V VN+ E VAVK + + P +++ +E + K + HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-KEICINKMLNHENV 66
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
VK +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 67 VKFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDM 187
+ HRD+KP N++ D+ + K++DFG A R ++ + GT Y+ P++
Sbjct: 122 GIGITHRDIKPENLL---LDERDNL-KISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 188 YERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 178 LKR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF D E G+ E + L AG+ +L
Sbjct: 68 KFYG--HRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 123 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF D E G+ E + L AG+ +L
Sbjct: 68 KFYG--HRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 123 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF D E G+ E + L AG+ +L
Sbjct: 69 KFYG--HRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 124 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 180 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
VLGKG+ G V +K G+ AVK + Q+ + +RE ++LK++ H NI+KL
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+ +G +V E+ TGG LF D+ + E + ++ + +G+ ++ N+
Sbjct: 99 EFFED---KGYFYLVGEVYTGGELF---DEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+VHRDLKP N++ + I ++ DFG + E ++ GT Y+ P++
Sbjct: 153 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEV------ 205
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ T+ D+WS GV LY + +G PF
Sbjct: 206 ---LHGTYDEKCDVWSTGVILYILLSGCPPF 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 67 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 122 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 178 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 22/221 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL-AI 76
LG GA G V + V K G K N + + V+ E ++ ++ H ++ L A
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK-NEISIMNQLHHPKLINLHDAF 117
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
E++ E V+++E +GG LF+ + Y + E E + + G+KH+ ++ +VH
Sbjct: 118 EDKYE---MVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172
Query: 137 RDLKPGNIMKFICD-DGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
D+KP NIM C+ ++ K+ DFG A +L D+ T E+ P++ V R+
Sbjct: 173 LDIKPENIM---CETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI----VDRE 225
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
PV G D+W+IGV Y + +G P+ G + ET+
Sbjct: 226 PV----GFYTDMWAIGVLGYVLLSG---LSPFAGEDDLETL 259
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 68 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 123 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 9 NYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVK 66
NY T +GKG V + G VA+K ++ + + P +Q RE ++K +
Sbjct: 16 NYRLLKT--IGKGNFAKVKLARHILTGREVAIKIIDK-TQLNPTSLQKLFREVRIMKILN 72
Query: 67 HENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAG 125
H NIVKL + E + + ++ME +GG +F+ L +G ++E+E + +
Sbjct: 73 HPNIVKLFEVIETE--KTLYLIMEYASGGEVFDYL----VAHGRMKEKEARSKFRQIVSA 126
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+++ R+VHRDLK N++ D K+ DFG + E + + G Y P
Sbjct: 127 VQYCHQKRIVHRDLKAENLLL----DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAP 182
Query: 186 DMYERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
++++ GK + G VD+WS+GV LY + +G+LPF
Sbjct: 183 ELFQ--------GKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF D E G+ E + L AG+ +L
Sbjct: 68 KFYG--HRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 123 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 25/220 (11%)
Query: 9 NYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVK 66
NY T +GKG V + G VA+K ++ + + P +Q RE ++K +
Sbjct: 13 NYRLLKT--IGKGNFAKVKLARHILTGREVAIKIIDK-TQLNPTSLQKLFREVRIMKILN 69
Query: 67 HENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAG 125
H NIVKL + E + + ++ME +GG +F+ L +G ++E+E + +
Sbjct: 70 HPNIVKLFEVIETE--KTLYLIMEYASGGEVFDYL----VAHGRMKEKEARSKFRQIVSA 123
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
+++ R+VHRDLK N++ D K+ DFG + E + + G+ Y P
Sbjct: 124 VQYCHQKRIVHRDLKAENLLL----DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAP 179
Query: 186 DMYERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
++++ GK + G VD+WS+GV LY + +G+LPF
Sbjct: 180 ELFQ--------GKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 69 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 124 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 180 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF D E G+ E + L AG+ +L
Sbjct: 68 KFYG--HRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 123 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 68 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 123 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 179 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ----LSHMRPHDVQMR---EFEVLKK 64
+ + LG GA G V + + VA+K ++ + R D + E E+LKK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H I+K I+ + IV+EL GG LF D L+E L +
Sbjct: 72 LNHPCIIK---IKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLL 125
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +N ++HRDLKP N++ + + K+TDFG ++ L E +L GT YL
Sbjct: 126 AVQYLHENGIIHRDLKPENVL-LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P+ VL + VD WS+GV L+ +G PF
Sbjct: 185 PE-----VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 69 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 124 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 180 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 69 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 124 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 180 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 69 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 124 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 180 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ----LSHMRPHDVQMR---EFEVLKK 64
+ + LG GA G V + + VA+K ++ + R D + E E+LKK
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H I+K I+ + IV+EL GG LF D L+E L +
Sbjct: 71 LNHPCIIK---IKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLL 124
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +N ++HRDLKP N++ + + K+TDFG ++ L E +L GT YL
Sbjct: 125 AVQYLHENGIIHRDLKPENVL-LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P+ VL + VD WS+GV L+ +G PF
Sbjct: 184 PE-----VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + K + HEN+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF+ + E G+ E + L AG+ +L
Sbjct: 69 KFYG--HRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 124 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 180 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ----LSHMRPHDVQMR---EFEVLKK 64
+ + LG GA G V + + VA+K ++ + R D + E E+LKK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H I+K I+ + IV+EL GG LF D L+E L +
Sbjct: 72 LNHPCIIK---IKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLL 125
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +N ++HRDLKP N++ + + K+TDFG ++ L E +L GT YL
Sbjct: 126 AVQYLHENGIIHRDLKPENVL-LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P+ VL + VD WS+GV L+ +G PF
Sbjct: 185 PE-----VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ----LSHMRPHDVQMR---EFEVLKK 64
+ + LG GA G V + + VA+K ++ + R D + E E+LKK
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H I+K I+ + IV+EL GG LF D L+E L +
Sbjct: 72 LNHPCIIK---IKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLL 125
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +N ++HRDLKP N++ + + K+TDFG ++ L E +L GT YL
Sbjct: 126 AVQYLHENGIIHRDLKPENVL-LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P+ VL + VD WS+GV L+ +G PF
Sbjct: 185 PE-----VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
VLGKG+ G V +K G+ AVK + Q+ + +RE ++LK++ H NI+KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+ +G +V E+ TGG LF D+ + E + ++ + +G+ ++ N+
Sbjct: 93 EFFED---KGYFYLVGEVYTGGELF---DEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+VHRDLKP N++ + I ++ DFG + E ++ GT Y+ P++
Sbjct: 147 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEV------ 199
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ T+ D+WS GV LY + +G PF
Sbjct: 200 ---LHGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 19/240 (7%)
Query: 5 RGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLK 63
+G + ++ LG GA G V +K A+K + S + ++ E VLK
Sbjct: 32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91
Query: 64 KVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLT 123
+ H NI+KL E++ R +VME GG LF D+ + E + ++++ +
Sbjct: 92 LLDHPNIMKLYDFFEDK--RNYYLVMECYKGGELF---DEIIHRMKFNEVDAAVIIKQVL 146
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYL 183
+G+ +L + +VHRDLKP N++ + + K+ DFG + E ++ GT Y+
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLL-LESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI 205
Query: 184 HPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
P+ VLR K + D+WSIGV L+ + G + P+GG+ ++E + + K
Sbjct: 206 APE-----VLR----KKYDEKCDVWSIGVILFILLAG---YPPFGGQTDQEILRKVEKGK 253
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 29/234 (12%)
Query: 17 VLGKGATGAVF---QGVNKNNGEPVAVKTFNQLSHMRPHDVQMR-EFEVLKKVKHENIVK 72
VLG+G+ G VF + ++G A+K + + V+ + E ++L V H +VK
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 73 L-LAIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
L A + E GK+ ++++ GG LF L EE+ L L G+ HL
Sbjct: 95 LHYAFQTE----GKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYE 189
+++RDLKP NI+ D+ I KLTDFG ++E ++ +++ S GT EY+ P++
Sbjct: 148 SLGIIYRDLKPENIL---LDEEGHI-KLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
R + + D WS GV ++ + TG+LPF+ G+ KETM I K
Sbjct: 204 R--------QGHSHSADWWSYGVLMFEMLTGSLPFQ---GKDRKETMTLILKAK 246
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ----LSHMRPHDVQMR---EFEVLKK 64
+ + LG GA G V + + VA++ ++ + R D + E E+LKK
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H I+K I+ + IV+EL GG LF D L+E L +
Sbjct: 211 LNHPCIIK---IKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLL 264
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +N ++HRDLKP N++ + + K+TDFG ++ L E +L GT YL
Sbjct: 265 AVQYLHENGIIHRDLKPENVL-LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P+ VL + VD WS+GV L+ +G PF
Sbjct: 324 PE-----VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 16/227 (7%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+GKG+ G V + + A+K N+ + ++V+ +E ++++ ++H +V L
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+++E +V++L GG L L + +EE L + L + +L++ R+
Sbjct: 82 YSFQDEEDM--FMVVDLLLGGDLRYHL---QQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
+HRD+KP NI+ D+ ++ +TDF A L + Q ++ GT+ Y+ P+M+ R
Sbjct: 137 IHRDMKPDNIL---LDEHGHVH-ITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS---R 189
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
K G +F VD WS+GVT Y + G P+ +KE ++ T
Sbjct: 190 KGAGYSFA--VDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ----LSHMRPHDVQMR---EFEVLKK 64
+ + LG GA G V + + VA+K ++ + R D + E E+LKK
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H I+K I+ + IV+EL GG LF D L+E L +
Sbjct: 78 LNHPCIIK---IKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLL 131
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+++L +N ++HRDLKP N++ + + K+TDFG ++ L E +L GT YL
Sbjct: 132 AVQYLHENGIIHRDLKPENVL-LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P+ VL + VD WS+GV L+ +G PF
Sbjct: 191 PE-----VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL- 74
LGKGA V + V G+ A N +LS R H RE + + +KH NIV+L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+I EE ++ +L TGG LF D Y E + ++ + + H +
Sbjct: 78 SISEEGH---HYLIFDLVTGGELFE--DIVAREY-YSEADASHCIQQILEAVLHCHQMGV 131
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-FMSLYGTEEYLHPDMYERAVL 193
VHR+LKP N++ G+ + KL DFG A E+E +QQ + GT YL P+ VL
Sbjct: 132 VHRNLKPENLLLASKLKGAAV-KLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-----VL 185
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
RK +G VDLW+ GV LY + G PF
Sbjct: 186 RK---DPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 15 TSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ----LSHMRPHDVQMR---EFEVLKKVKH 67
+ LG GA G V + + VA++ ++ + R D + E E+LKK+ H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
I+K I+ + IV+EL GG LF D L+E L + ++
Sbjct: 200 PCIIK---IKNFFDAEDYYIVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
+L +N ++HRDLKP N++ + + K+TDFG ++ L E +L GT YL P+
Sbjct: 254 YLHENGIIHRDLKPENVL-LSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE- 311
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
VL + VD WS+GV L+ +G PF
Sbjct: 312 ----VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
VLGKG+ G V +K G+ AVK + Q+ + +RE ++LK++ H NI+KL
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+ +G +V E+ TGG LF D+ + E + ++ + +G+ ++ N+
Sbjct: 116 EFFED---KGYFYLVGEVYTGGELF---DEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+VHRDLKP N++ + I ++ DFG + E ++ GT Y+ P++
Sbjct: 170 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEV------ 222
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ T+ D+WS GV LY + +G PF
Sbjct: 223 ---LHGTYDEKCDVWSTGVILYILLSGCPPF 250
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
VLGKG+ G V +K G+ AVK + Q+ + +RE ++LK++ H NI+KL
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+ +G +V E+ TGG LF D+ + E + ++ + +G+ ++ N+
Sbjct: 117 EFFED---KGYFYLVGEVYTGGELF---DEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+VHRDLKP N++ + I ++ DFG + E ++ GT Y+ P++
Sbjct: 171 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEV------ 223
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ T+ D+WS GV LY + +G PF
Sbjct: 224 ---LHGTYDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHD--VQMREFEVLKKVKHENIVKLLA 75
LG GA G V +K G A+K + S + + E VLK++ H NI+KL
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E++ R +VME+ GG LF D+ E + ++++ + +G +L + +V
Sbjct: 89 FFEDK--RNYYLVMEVYRGGELF---DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIV 143
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRDLKP N++ + K+ DFG + E + GT Y+ P+ VLR
Sbjct: 144 HRDLKPENLL-LESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE-----VLR- 196
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKAS 245
K + D+WS GV LY + G + P+GG+ ++E + + K S
Sbjct: 197 ---KKYDEKCDVWSCGVILYILLCG---YPPFGGQTDQEILKRVEKGKFS 240
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 20/230 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHD--VQMREFEVLKKVKHENIVKLLA 75
LG GA G V +K G A+K + S + + E VLK++ H NI+KL
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E++ R +VME+ GG LF D+ E + ++++ + +G +L + +V
Sbjct: 72 FFEDK--RNYYLVMEVYRGGELF---DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIV 126
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRDLKP N++ + K+ DFG + E + GT Y+ P+ VLRK
Sbjct: 127 HRDLKPENLL-LESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE-----VLRK 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKAS 245
+ D+WS GV LY + G + P+GG+ ++E + + K S
Sbjct: 181 K----YDEKCDVWSCGVILYILLCG---YPPFGGQTDQEILKRVEKGKFS 223
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG+GA G V VN+ E VAVK + + + +E + + HEN+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
K +EG + + +E C+GG LF D E G+ E + L AG+ +L
Sbjct: 69 KFYG--HRREGNIQYLFLEYCSGGELF---DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMY 188
+ HRD+KP N++ D K++DFG A R ++ + GT Y+ P++
Sbjct: 124 IGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 189 ERAVLRKPVGKTFGA-TVDLWSIGVTLYHVATGNLPF 224
+R + F A VD+WS G+ L + G LP+
Sbjct: 180 KR--------REFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG GA G V++ NK A K + S D M E ++L H NIV
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILASCDHPNIV 97
Query: 72 KLL-AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
KLL A E I++E C GG++ ++ + E L E + +V + + +L
Sbjct: 98 KLLDAFYYEN---NLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLH 152
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYE 189
DN+++HRDLK GNI+ + DG KL DFG +A+ Q+ S GT ++ P E
Sbjct: 153 DNKIIHRDLKAGNILFTL--DGDI--KLADFGVSAKNTRXIQRRDSFIGTPYWMAP---E 205
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + + D+WS+G+TL +A P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 34/237 (14%)
Query: 1 MSFLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQ---LSHMRPHDVQMR 57
++ G + + T S LG GA G V+ V+K + V VK + L D ++
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG 74
Query: 58 ----EFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNI------LDDPENT 107
E +L +V+H NI+K+L I E Q G ++++ + +G LF LD+P +
Sbjct: 75 KVTLEIAILSRVEHANIIKVLDIFENQ-GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 108 YGLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL 167
Y + L + + +LR ++HRD+K NI+ I +D + KL DFG+A L
Sbjct: 134 Y---------IFRQLVSAVGYLRLKDIIHRDIKDENIV--IAEDFTI--KLIDFGSAAYL 180
Query: 168 EEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
E + F + GT EY P++ R P +++WS+GVTLY + PF
Sbjct: 181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGP-------ELEMWSLGVTLYTLVFEENPF 230
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHM--RPHDVQMREFEVLKKVKHENIVKLLA 75
+G+G+ G + +G +K N +S M + + RE VL +KH NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEIN-ISRMSSKEREESRREVAVLANMKHPNIVQYR- 89
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E +E IVM+ C GG LF ++ + QE++ L + +KH+ D +++
Sbjct: 90 -ESFEENGSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLALKHVHDRKIL 147
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM-SLYGTEEYLHPDMYERAVLR 194
HRD+K NI F+ DG+ +L DFG AR L + + GT YL P++ E
Sbjct: 148 HRDIKSQNI--FLTKDGTV--QLGDFGIARVLNSTVELARACIGTPYYLSPEICE----- 198
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT 219
K + D+W++G LY + T
Sbjct: 199 ---NKPYNNKSDIWALGCVLYELCT 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG GA G V++ NK A K + S D M E ++L H NIV
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILASCDHPNIV 97
Query: 72 KLL-AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
KLL A E I++E C GG++ ++ + E L E + +V + + +L
Sbjct: 98 KLLDAFYYEN---NLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLH 152
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYE 189
DN+++HRDLK GNI+ + DG KL DFG +A+ Q+ S GT ++ P E
Sbjct: 153 DNKIIHRDLKAGNILFTL--DGDI--KLADFGVSAKNTRTIQRRDSFIGTPYWMAP---E 205
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + + D+WS+G+TL +A P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+GA+G V+ ++ G+ VA++ N L ++ + E V+++ K+ NIV L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILVMRENKNPNIVNYL--D 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GGSL +++ + + E + V ++ L N+++HR
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS-LYGTEEYLHPDMYERAVLRKP 196
D+K NI+ + DGS KLTDFG ++ +Q S + GT ++ P++ R
Sbjct: 141 DIKSDNIL--LGMDGSV--KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR------ 190
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K +G VD+WS+G+ + G P+
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN--QLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
VLGKG+ G V +K G+ AVK + Q+ + +RE ++LK++ H NI KL
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+ +G +V E+ TGG LF D+ + E + ++ + +G+ + N+
Sbjct: 93 EFFED---KGYFYLVGEVYTGGELF---DEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+VHRDLKP N++ + I ++ DFG + E ++ GT Y+ P++
Sbjct: 147 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKXKDKIGTAYYIAPEV------ 199
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ T+ D+WS GV LY + +G PF
Sbjct: 200 ---LHGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+GA+G V+ ++ G+ VA++ N L ++ + E V+++ K+ NIV L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILVMRENKNPNIVNYL--D 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GGSL +++ + + E + V ++ L N+++HR
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS-LYGTEEYLHPDMYERAVLRKP 196
D+K NI+ + DGS KLTDFG ++ +Q S + GT ++ P++ R
Sbjct: 141 DIKSDNIL--LGMDGSV--KLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR------ 190
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K +G VD+WS+G+ + G P+
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+GA+G V+ ++ G+ VA++ N L ++ + E V+++ K+ NIV L +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILVMRENKNPNIVNYL--D 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GGSL +++ + + E + V ++ L N+++HR
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS-LYGTEEYLHPDMYERAVLRKP 196
D+K NI+ + DGS KLTDFG ++ +Q S + GT ++ P++ R
Sbjct: 141 DIKSDNIL--LGMDGSV--KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR------ 190
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K +G VD+WS+G+ + G P+
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+GA+G V+ ++ G+ VA++ N L ++ + E V+++ K+ NIV L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILVMRENKNPNIVNYL--D 85
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GGSL +++ + + E + V ++ L N+++HR
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS-LYGTEEYLHPDMYERAVLRKP 196
D+K NI+ + DGS KLTDFG ++ +Q S + GT ++ P++ R
Sbjct: 142 DIKSDNIL--LGMDGSV--KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR------ 191
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K +G VD+WS+G+ + G P+
Sbjct: 192 --KAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 31/241 (12%)
Query: 9 NYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ---MREFEVLKKV 65
N+ T+ LG+G V Q ++K+ G+ A K + R D + + E VL+
Sbjct: 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKK--RRRGQDCRAEILHEIAVLELA 85
Query: 66 KHENIVKLLAIEEEQEGRGKVI-VMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
K + +++ + E E ++I ++E GG +F+ L PE + E + + +++ +
Sbjct: 86 K--SCPRVINLHEVYENTSEIILILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILE 142
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIY-----KLTDFGAARELEEDQQFMSLYGT 179
G+ +L N +VH DLKP NI+ S+IY K+ DFG +R++ + + GT
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILL------SSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
EYL P++ P+ D+W+IG+ Y + T PF G N+ET I
Sbjct: 197 PEYLAPEILN----YDPI----TTATDMWNIGIIAYMLLTHTSPFV---GEDNQETYLNI 245
Query: 240 T 240
+
Sbjct: 246 S 246
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
W LG GA G V++ NK A K + S D M E ++L H NIV
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILASCDHPNIV 97
Query: 72 KLL-AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
KLL A E I++E C GG++ ++ + E L E + +V + + +L
Sbjct: 98 KLLDAFYYEN---NLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLH 152
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYE 189
DN+++HRDLK GNI+ + DG KL DFG +A+ Q+ GT ++ P E
Sbjct: 153 DNKIIHRDLKAGNILFTL--DGDI--KLADFGVSAKNTRXIQRRDXFIGTPYWMAP---E 205
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + + D+WS+G+TL +A P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVK--------TFNQLSHMRPHDVQMREFEVLKKVK-H 67
+LG+G + V + ++K + AVK +F+ + ++E ++L+KV H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
NI++L E +V +L G LF+ L + L E+E ++ L +
Sbjct: 84 PNIIQLKDTYETNTFF--FLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVIC 138
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
L +VHRDLKP NI+ DD I KLTDFG + +L+ ++ S+ GT YL P++
Sbjct: 139 ALHKLNIVHRDLKPENIL---LDDDMNI-KLTDFGFSCQLDPGEKLRSVCGTPSYLAPEI 194
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
E ++ G +G VD+WS GV +Y + G+ PF
Sbjct: 195 IECSMNDNHPG--YGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 117/235 (49%), Gaps = 31/235 (13%)
Query: 17 VLGKGATGAVFQGVNKNNGEPV----AVKTFNQLS-HMRPHDVQMREFEVLKKVKHENIV 71
VLG+G+ G VF V K +G A+K + + +R E ++L +V H IV
Sbjct: 32 VLGQGSFGKVFL-VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 72 KL-LAIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
KL A + E GK+ ++++ GG LF L EE+ L L + HL
Sbjct: 91 KLHYAFQTE----GKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDHL 143
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMY 188
+++RDLKP NI+ D+ I KLTDFG ++E ++ +++ S GT EY+ P++
Sbjct: 144 HSLGIIYRDLKPENIL---LDEEGHI-KLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
R G T + D WS GV ++ + TG LPF+ G+ KETM I K
Sbjct: 200 NRR------GHT--QSADWWSFGVLMFEMLTGTLPFQ---GKDRKETMTMILKAK 243
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 117/235 (49%), Gaps = 31/235 (13%)
Query: 17 VLGKGATGAVFQGVNKNNGEPV----AVKTFNQLS-HMRPHDVQMREFEVLKKVKHENIV 71
VLG+G+ G VF V K +G A+K + + +R E ++L +V H IV
Sbjct: 31 VLGQGSFGKVFL-VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 72 KL-LAIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
KL A + E GK+ ++++ GG LF L EE+ L L + HL
Sbjct: 90 KLHYAFQTE----GKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDHL 142
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMY 188
+++RDLKP NI+ D+ I KLTDFG ++E ++ +++ S GT EY+ P++
Sbjct: 143 HSLGIIYRDLKPENIL---LDEEGHI-KLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
R G T + D WS GV ++ + TG LPF+ G+ KETM I K
Sbjct: 199 NRR------GHT--QSADWWSFGVLMFEMLTGTLPFQ---GKDRKETMTMILKAK 242
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 5 RGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKK 64
+G N + + +G+G+ G V V K A K + + D +E E++K
Sbjct: 4 KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDVDRFKQEIEIMKS 62
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H NI++L E ++ +VMELCTGG LF + + +E + +++ + +
Sbjct: 63 LDHPNIIRLY--ETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLS 117
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+ + + HRDLKP N + F+ D + KL DFG A + + + GT Y+
Sbjct: 118 AVAYCHKLNVAHRDLKPENFL-FLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P + E +G D WS GV +Y + G PF
Sbjct: 177 PQVLE---------GLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 117/235 (49%), Gaps = 31/235 (13%)
Query: 17 VLGKGATGAVFQGVNKNNGEPV----AVKTFNQLS-HMRPHDVQMREFEVLKKVKHENIV 71
VLG+G+ G VF V K +G A+K + + +R E ++L +V H IV
Sbjct: 31 VLGQGSFGKVFL-VKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 72 KL-LAIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
KL A + E GK+ ++++ GG LF L EE+ L L + HL
Sbjct: 90 KLHYAFQTE----GKLYLILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDHL 142
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMY 188
+++RDLKP NI+ D+ I KLTDFG ++E ++ +++ S GT EY+ P++
Sbjct: 143 HSLGIIYRDLKPENIL---LDEEGHI-KLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
R G T + D WS GV ++ + TG LPF+ G+ KETM I K
Sbjct: 199 NRR------GHT--QSADWWSFGVLMFEMLTGTLPFQ---GKDRKETMTMILKAK 242
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G+ VAVK ++ + + +Q RE ++K + H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +VME +GG +F+ L +G ++E+E + + +++ +
Sbjct: 81 VIETE--KTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ D K+ DFG + E + + G+ Y P++++
Sbjct: 135 VHRDLKAENLLL----DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ----- 185
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 186 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 16/220 (7%)
Query: 5 RGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKK 64
+G N + + +G+G+ G V V K A K + + D +E E++K
Sbjct: 21 KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDVDRFKQEIEIMKS 79
Query: 65 VKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+ H NI++L E ++ +VMELCTGG LF + + +E + +++ + +
Sbjct: 80 LDHPNIIRLY--ETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLS 134
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+ + + HRDLKP N + F+ D + KL DFG A + + + GT Y+
Sbjct: 135 AVAYCHKLNVAHRDLKPENFL-FLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 193
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P + E +G D WS GV +Y + G PF
Sbjct: 194 PQVLE---------GLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G+ VAVK ++ + + +Q RE ++K + H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +VME +GG +F+ L +G ++E+E + + +++ +
Sbjct: 81 VIETE--KTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ D K+ DFG + E + + G+ Y P++++
Sbjct: 135 VHRDLKAENLLL----DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ----- 185
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 186 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG GA V K G+ AVK + + E VL+K+KHENIV L I
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E +VM+L +GG LF+ + E + +++ L+ + L A + +L +VHR
Sbjct: 90 ESPNHL--YLVMQLVSGGELFDRI--VEKGFYTEKDASTLIRQVLDA-VYYLHRMGIVHR 144
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKPV 197
DLKP N++ + D+ S I ++DFG ++ + + GT Y+ P++ + +KP
Sbjct: 145 DLKPENLLYYSQDEESKIM-ISDFGLSKMEGKGDVMSTACGTPGYVAPEV----LAQKPY 199
Query: 198 GKTFGATVDLWSIGVTLYHVATGNLPF 224
K VD WSIGV Y + G PF
Sbjct: 200 SK----AVDCWSIGVIAYILLCGYPPF 222
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G+ VAVK ++ + + +Q RE ++K + H NIVKL
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +VME +GG +F+ L +G ++E+E + + +++ +
Sbjct: 74 VIETE--KTLYLVMEYASGGEVFDYL----VAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ D K+ DFG + E + + G+ Y P++++
Sbjct: 128 VHRDLKAENLLL----DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ----- 178
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 179 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G+ VAVK ++ + + +Q RE ++K + H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +VME +GG +F+ L +G ++E+E + + +++ +
Sbjct: 81 VIETE--KTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ D K+ DFG + E + + G Y P++++
Sbjct: 135 VHRDLKAENLLL----DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ----- 185
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 186 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 33/248 (13%)
Query: 11 VWCTTSVLGKGATGAVFQGVNKNNGEPVAVKT-----FNQLSHMRPHDVQMREFEVLKKV 65
V+ V+GKGA V + +N+ G+ AVK F + D++ RE + +
Sbjct: 25 VYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHML 83
Query: 66 KHENIVKLLAIEEEQEGRGKV-IVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLT 123
KH +IV+LL E G + +V E G L F I+ + + E + +
Sbjct: 84 KHPHIVELL---ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM-SLYGTEEY 182
+++ DN ++HRD+KP N++ + S KL DFG A +L E GT +
Sbjct: 141 EALRYCHDNNIIHRDVKPENVL-LASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHF 199
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTK 242
+ P++ V R+P GK VD+W GV L+ + +G LPF YG KE ++
Sbjct: 200 MAPEV----VKREPYGK----PVDVWGCGVILFILLSGCLPF--YG---TKERLF----- 241
Query: 243 KASGVISG 250
G+I G
Sbjct: 242 --EGIIKG 247
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+GA+G V+ ++ G+ VA++ N L ++ + E V+++ K+ NIV L +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILVMRENKNPNIVNYL--D 85
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GGSL +++ + + E + V ++ L N+++HR
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS-LYGTEEYLHPDMYERAVLRKP 196
++K NI+ + DGS KLTDFG ++ +Q S + GT ++ P++ R
Sbjct: 142 NIKSDNIL--LGMDGSV--KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR------ 191
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
K +G VD+WS+G+ + G P+
Sbjct: 192 --KAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G+ VAV+ ++ + + +Q RE ++K + H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +VME +GG +F+ L +G ++E+E + + +++ +
Sbjct: 81 VIETE--KTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ D K+ DFG + E + + G+ Y P++++
Sbjct: 135 VHRDLKAENLLL----DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ----- 185
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 186 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 86 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E + G + L
Sbjct: 144 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 197
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 198 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 246
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 84 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E + G + L
Sbjct: 142 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 195
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 196 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 244
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 86 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E + G + L
Sbjct: 144 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 197
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 198 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 246
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 87 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E + G + L
Sbjct: 145 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 198
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 199 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 247
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 115 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E + G + L
Sbjct: 173 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 226
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 227 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 275
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 93 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E + G + L
Sbjct: 151 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 204
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 205 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 253
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 22/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ---MREFEVLKKVKHENIVKLL 74
LG G G V G ++ G VAVK N+ +R DV RE + LK +H +I+KL
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ +VME +GG LF+ + L E+E + + + +G+ + + +
Sbjct: 83 QVISTPSD--IFMVMEYVSGGELFDYI---CKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLKP N++ D K+ DFG + + + + G+ Y P++
Sbjct: 138 VHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS----- 188
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
G+ + G VD+WS GV LY + G LPF
Sbjct: 189 ---GRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVK--------TFNQLSHMRPHDVQMREFEVLKKVK-H 67
+LG+G + V + ++K + AVK +F+ + ++E ++L+KV H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
NI++L E +V +L G LF+ L + L E+E ++ L +
Sbjct: 84 PNIIQLKDTYETNTFF--FLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVIC 138
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
L +VHRDLKP NI+ DD I KLTDFG + +L+ ++ + GT YL P++
Sbjct: 139 ALHKLNIVHRDLKPENIL---LDDDMNI-KLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
E ++ G +G VD+WS GV +Y + G+ PF
Sbjct: 195 IECSMNDNHPG--YGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVK--------TFNQLSHMRPHDVQMREFEVLKKVK-H 67
+LG+G + V + ++K + AVK +F+ + ++E ++L+KV H
Sbjct: 11 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 70
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
NI++L E +V +L G LF+ L + L E+E ++ L +
Sbjct: 71 PNIIQLKDTYETNTFF--FLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVIC 125
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
L +VHRDLKP NI+ DD I KLTDFG + +L+ ++ + GT YL P++
Sbjct: 126 ALHKLNIVHRDLKPENIL---LDDDMNI-KLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 181
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
E ++ G +G VD+WS GV +Y + G+ PF
Sbjct: 182 IECSMNDNHPG--YGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 80 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E + G + L
Sbjct: 138 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 191
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 192 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 240
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G+ VAV+ ++ + + +Q RE ++K + H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDK-TQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +VME +GG +F+ L +G ++E+E + + +++ +
Sbjct: 81 VIETE--KTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ D K+ DFG + E + G+ Y P++++
Sbjct: 135 VHRDLKAENLLL----DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQ----- 185
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 186 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G + K++G+ + K + S M + QM E +L+++KH NIV+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMK--HLRDN 132
++ IVME C GG L +++ +EEF+L V+ LT +K H R +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 133 ---RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMY 188
++HRDLKP N+ F+ DG KL DFG AR L D F + GT Y+ P+
Sbjct: 133 GGHTVLHRDLKPANV--FL--DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
R ++ D+WS+G LY + PF +
Sbjct: 189 NRM--------SYNEKSDIWSLGCLLYELCALMPPFTAF 219
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 21/224 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKL- 73
VLG+G G VF K G+ A K N+ + Q M E ++L KV IV L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 74 LAIEEEQEGRGKVIVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
A E + + +VM + GG + ++I + E+ G QE + + +G++HL
Sbjct: 252 YAFETKTD---LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERA 191
+++RDLKP N++ + DDG+ +++D G A EL+ Q Y GT ++ P++
Sbjct: 309 NIIYRDLKPENVL--LDDDGNV--RISDLGLAVELKAGQTKTKGYAGTPGFMAPELL--- 361
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGR-RNKE 234
+G+ + +VD +++GVTLY + PFR G + NKE
Sbjct: 362 -----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I+MEL GG L + L + P L + L V + G ++
Sbjct: 98 CIGVSLQSLPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 156 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 215 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 260
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G + K++G+ + K + S M + QM E +L+++KH NIV+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMK--HLRDN 132
++ IVME C GG L +++ +EEF+L V+ LT +K H R +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 133 ---RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMY 188
++HRDLKP N+ F+ DG KL DFG AR L D F + GT Y+ P+
Sbjct: 133 GGHTVLHRDLKPANV--FL--DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
R ++ D+WS+G LY + PF +
Sbjct: 189 NRM--------SYNEKSDIWSLGCLLYELCALMPPFTAF 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G + K++G+ + K + S M + QM E +L+++KH NIV+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMK--HLRDN 132
++ IVME C GG L +++ +EEF+L V+ LT +K H R +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 133 ---RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMY 188
++HRDLKP N+ F+ DG KL DFG AR L D+ F + GT Y+ P+
Sbjct: 133 GGHTVLHRDLKPANV--FL--DGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
R ++ D+WS+G LY + PF +
Sbjct: 189 NRM--------SYNEKSDIWSLGCLLYELCALMPPFTAF 219
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 21/224 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKL- 73
VLG+G G VF K G+ A K N+ + Q M E ++L KV IV L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 74 LAIEEEQEGRGKVIVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
A E + + +VM + GG + ++I + E+ G QE + + +G++HL
Sbjct: 252 YAFETKTD---LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERA 191
+++RDLKP N++ + DDG+ +++D G A EL+ Q Y GT ++ P++
Sbjct: 309 NIIYRDLKPENVL--LDDDGNV--RISDLGLAVELKAGQTKTKGYAGTPGFMAPELL--- 361
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGR-RNKE 234
+G+ + +VD +++GVTLY + PFR G + NKE
Sbjct: 362 -----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 21/224 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKL- 73
VLG+G G VF K G+ A K N+ + Q M E ++L KV IV L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 74 LAIEEEQEGRGKVIVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
A E + + +VM + GG + ++I + E+ G QE + + +G++HL
Sbjct: 252 YAFETKTD---LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERA 191
+++RDLKP N++ + DDG+ +++D G A EL+ Q Y GT ++ P++
Sbjct: 309 NIIYRDLKPENVL--LDDDGNV--RISDLGLAVELKAGQTKTKGYAGTPGFMAPELL--- 361
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGR-RNKE 234
+G+ + +VD +++GVTLY + PFR G + NKE
Sbjct: 362 -----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 21/224 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKL- 73
VLG+G G VF K G+ A K N+ + Q M E ++L KV IV L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 74 LAIEEEQEGRGKVIVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
A E + + +VM + GG + ++I + E+ G QE + + +G++HL
Sbjct: 252 YAFETKTD---LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERA 191
+++RDLKP N++ + DDG+ +++D G A EL+ Q Y GT ++ P++
Sbjct: 309 NIIYRDLKPENVL--LDDDGNV--RISDLGLAVELKAGQTKTKGYAGTPGFMAPELL--- 361
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGR-RNKE 234
+G+ + +VD +++GVTLY + PFR G + NKE
Sbjct: 362 -----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I+MEL GG L + L + P L + L V + G ++
Sbjct: 113 CIGVSLQSLPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 171 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 230 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 275
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 87 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E G + L
Sbjct: 145 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIXETDXXRK--GGKGLLPV 198
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 199 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 78 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N M + +D + K+ DFG R++ E G + L
Sbjct: 136 MAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIXETDXXRK--GGKGLLPV 189
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 190 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 238
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K+ H+NIV+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 99 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 157 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 216 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 261
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 105 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 163 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 222 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 267
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 66 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 119
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 120 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 179 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 236
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 237 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K+ H+NIV+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 113 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 171 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 230 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 275
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL--- 73
V+G GAT V E VA+K N D ++E + + + H NIV
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILD----DPENTYG-LQEEEFLLVLEHLTAGMKH 128
+++E +VM+L +GGS+ +I+ E+ G L E +L + G+++
Sbjct: 82 FVVKDEL-----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAR------ELEEDQQFMSLYGTEEY 182
L N +HRD+K GNI+ + +DGS ++ DFG + ++ ++ + GT +
Sbjct: 137 LHKNGQIHRDVKAGNIL--LGEDGSV--QIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+ P++ E+ + + D+WS G+T +ATG P+ Y
Sbjct: 193 MAPEVMEQV-------RGYDFKADIWSFGITAIELATGAAPYHKY 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK-HENIVKLLAI 76
LG+G+ + V+K + + AVK ++ R +E LK + H NIVKL +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK----RMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+Q +VMEL GG LF + ++ E E ++ L + + H+ D +VH
Sbjct: 75 FHDQ--LHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ------FMSLYGTEEYLHPDMYER 190
RDLKP N++ F ++ + K+ DFG AR D Q F Y E L+ + Y+
Sbjct: 130 RDLKPENLL-FTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDE 188
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+ DLWS+GV LY + +G +PF+ +
Sbjct: 189 -------------SCDLWSLGVILYTMLSGQVPFQSH 212
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 125 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 183 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 242 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 287
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 75
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 135 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 192
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 193 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 115 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 173 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 232 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 277
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 21 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 74
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 75 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 134 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 191
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 192 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 99 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 157 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 216 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 261
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 72 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 125
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 126 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 185 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 242
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 243 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 75
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 135 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 192
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 193 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 20 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 73
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 133 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 190
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 191 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 90 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 148 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 207 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 252
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 27 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 80
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 81 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 140 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 197
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 198 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 20 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 73
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE-----DQQFMSLYGTEEYLHP 185
+ HRD+KP N++ + + I KLTDFG A+E + + Y E L P
Sbjct: 133 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGP 191
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ Y++ + D+WS+GV +Y + G PF
Sbjct: 192 EKYDK-------------SCDMWSLGVIMYILLCGYPPF 217
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL--- 73
V+G GAT V E VA+K N D ++E + + + H NIV
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILD----DPENTYG-LQEEEFLLVLEHLTAGMKH 128
+++E +VM+L +GGS+ +I+ E+ G L E +L + G+++
Sbjct: 77 FVVKDEL-----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAR------ELEEDQQFMSLYGTEEY 182
L N +HRD+K GNI+ + +DGS ++ DFG + ++ ++ + GT +
Sbjct: 132 LHKNGQIHRDVKAGNIL--LGEDGSV--QIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+ P++ E+ + + D+WS G+T +ATG P+ Y
Sbjct: 188 MAPEVMEQV-------RGYDFKADIWSFGITAIELATGAAPYHKY 225
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 28 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 81
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 82 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 141 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 198
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 199 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 26 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 79
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 80 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 139 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 196
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D+WS+GV +Y + G PF
Sbjct: 197 -------PEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 98 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 156 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 215 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 260
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
V+G+GA G V + K + VA+K S + V++R+ L +V H NIVKL
Sbjct: 15 VVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQ---LSRVNHPNIVKLYGA 69
Query: 77 EEEQEGRGKVIVMELCTGGSLFNIL--DDPENTY-GLQEEEFLLVLEHLTAGMKHLRDNR 133
+VME GGSL+N+L +P Y + L A + ++
Sbjct: 70 CLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
L+HRDLKP N++ G T+ K+ DFG A +++ + G+ ++ P+++E
Sbjct: 126 LIHRDLKPPNLLLVA---GGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFE---- 176
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
G + D++S G+ L+ V T PF GG
Sbjct: 177 ----GSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 208
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
V+G+GA G V + K + VA+K S + V++R+ L +V H NIVKL
Sbjct: 16 VVGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFIVELRQ---LSRVNHPNIVKLYGA 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNIL--DDPENTY-GLQEEEFLLVLEHLTAGMKHLRDNR 133
+VME GGSL+N+L +P Y + L A + ++
Sbjct: 71 CLNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
L+HRDLKP N++ G T+ K+ DFG A +++ + G+ ++ P+++E
Sbjct: 127 LIHRDLKPPNLLLVA---GGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFE---- 177
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
G + D++S G+ L+ V T PF GG
Sbjct: 178 ----GSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 209
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 37/240 (15%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFN-------------ILDDPENTYGLQEEEFLLVL 119
LL + +G+ +++MEL T G L + +L P + +Q +
Sbjct: 83 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ------MA 134
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
+ GM +L N+ VHRDL N M + +D + K+ DFG R++ E + G
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GG 188
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ L L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 243
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 116 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 174 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 233 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 278
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 139 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 197 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 256 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 301
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQEEEFLLVLE---HLTAG 125
LL + +G+ +++MEL T G L + L + EN L +++ + G
Sbjct: 80 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L N+ VHRDL N + +D + K+ DFG R++ E + G + L
Sbjct: 138 MAYLNANKFVHRDLAARNCX--VAEDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 191
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 192 RWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 240
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 17 VLGKGATGAVFQG---VNKNNGEPVAVKTFNQLSHMR-PHDVQMREFE--VLKKVKHENI 70
VLGKG G VFQ N G+ A+K + +R D + E +L++VKH I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
V L I Q G +++E +GG LF L E E+ L ++ + HL
Sbjct: 84 VDL--IYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLH 138
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYE 189
+++RDLKP NIM + G KLTDFG +E D + GT EY+ P++
Sbjct: 139 QKGIIYRDLKPENIM--LNHQGHV--KLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
R+ + VD WS+G +Y + TG PF
Sbjct: 195 RSGHNR--------AVDWWSLGALMYDMLTGAPPF 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 17 VLGKGATGAVFQG---VNKNNGEPVAVKTFNQLSHMR-PHDVQMREFE--VLKKVKHENI 70
VLGKG G VFQ N G+ A+K + +R D + E +L++VKH I
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
V L I Q G +++E +GG LF L E E+ L ++ + HL
Sbjct: 84 VDL--IYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLH 138
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYE 189
+++RDLKP NIM + G KLTDFG +E D + GT EY+ P++
Sbjct: 139 QKGIIYRDLKPENIM--LNHQGHV--KLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
R+ + VD WS+G +Y + TG PF
Sbjct: 195 RSGHNR--------AVDWWSLGALMYDMLTGAPPF 221
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 37/240 (15%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++GV K EP VA+KT N+ + MR + E V+K+ ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFN-------------ILDDPENTYGLQEEEFLLVL 119
LL + +G+ +++MEL T G L + +L P + +Q +
Sbjct: 93 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ------MA 144
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
+ GM +L N+ VHRDL N M + +D + K+ DFG R++ E + G
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCM--VAEDFTV--KIGDFGMTRDIYETDYYRK--GG 198
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ L L+ V T+ D+WS GV L+ +AT L +PY G N++ + ++
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFV 253
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 36 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 89
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-----FMSLYGTEEYLHP 185
+ HRD+KP N++ + + I KLTDFG A+E + Y E L P
Sbjct: 149 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP 207
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ Y++ + D+WS+GV +Y + G PF
Sbjct: 208 EKYDK-------------SCDMWSLGVIMYILLCGYPPF 233
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 113 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG AR++ + +++ P
Sbjct: 171 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 230 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 32 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + +++ + + GM +L ++
Sbjct: 88 YSTKPQ---LAIVTQWCEGSSLYHHLHASETKFEMKK--LIDIARQTARGMDYLHAKSII 142
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARE---LEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A E QF L G+ ++ P+ V
Sbjct: 143 HRDLKSNNI--FLHEDNTV--KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-----V 193
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-------------------------PH 52
+GKG+ G V N+N+ A+K ++ +R P
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
+ +E +LKK+ H N+VKL+ + ++ +V EL G + + L E
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV----PTLKPLSE 136
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
++ + L G+++L +++HRD+KP N++ + +DG K+ DFG + E +
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL--VGEDGHI--KIADFGVSNEFKGSDA 192
Query: 173 FMS-LYGTEEYLHPDMYERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
+S GT ++ P+ K F G +D+W++GVTLY G PF
Sbjct: 193 LLSNTVGTPAFMAPESLSET------RKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 18 LGKGATGAVFQG-VNKNNGEP----VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG GA G V++G V+ +P VAVKT ++ + + E ++ K H+NIV+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKH 128
+ + + R I++EL GG L + L + P L + L V + G ++
Sbjct: 99 CIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHP 185
L +N +HRD+ N + C + K+ DFG A+++ + +++ P
Sbjct: 157 LEENHFIHRDIAARNCL-LTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITT 241
+ + + F + D WS GV L+ + + L + PY + N+E + ++T+
Sbjct: 216 EAFMEGI--------FTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLEFVTS 261
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 32 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ IV + C G SL++ L E + +++ + + GM +L ++
Sbjct: 88 YSTAPQ---LAIVTQWCEGSSLYHHLHASETKFEMKK--LIDIARQTARGMDYLHAKSII 142
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARE---LEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A E QF L G+ ++ P+ V
Sbjct: 143 HRDLKSNNI--FLHEDNTV--KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-----V 193
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL--KKVKHENIVKLLA 75
LGKG F+ + + E A K + ++PH + E+ + + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+ELC SL + + L E E L + G ++L NR++
Sbjct: 85 FFEDNDF--VFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ +D K+ DFG A ++E D ++ +L GT Y+ P++ +
Sbjct: 140 HRDLKLGNL--FLNEDLEV--KIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK--- 192
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WSIG +Y + G PF
Sbjct: 193 ---GHSF--EVDVWSIGCIMYTLLVGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL--KKVKHENIVKLLA 75
LGKG F+ + + E A K + ++PH + E+ + + H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+ELC SL + + L E E L + G ++L NR++
Sbjct: 89 FFEDNDF--VFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLHRNRVI 143
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ +D K+ DFG A ++E D ++ +L GT Y+ P++ +
Sbjct: 144 HRDLKLGNL--FLNEDLEV--KIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK--- 196
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WSIG +Y + G PF
Sbjct: 197 ---GHSF--EVDVWSIGCIMYTLLVGKPPF 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+GKG V + G+ VAVK ++ + + +Q RE + K + H NIVKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E + + +V E +GG +F+ L +G +E+E + + +++ +
Sbjct: 81 VIETE--KTLYLVXEYASGGEVFDYL----VAHGRXKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLK N++ D K+ DFG + E + + G Y P++++
Sbjct: 135 VHRDLKAENLLL----DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ----- 185
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS+GV LY + +G+LPF
Sbjct: 186 ---GKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL--KKVKHENIVKLLA 75
LGKG F+ + + E A K + ++PH + E+ + + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+ELC SL + + L E E L + G ++L NR++
Sbjct: 85 FFEDNDF--VFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ +D K+ DFG A ++E D ++ +L GT Y+ P++ +
Sbjct: 140 HRDLKLGNL--FLNEDLEV--KIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK--- 192
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WSIG +Y + G PF
Sbjct: 193 ---GHSF--EVDVWSIGCIMYTLLVGKPPF 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G V + GE VA+K ++ + E E LK ++H++I +L +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E +V+E C GG LF+ + + L EEE +V + + + ++ HR
Sbjct: 78 ET--ANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAYVHSQGYAHR 132
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG--AARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
DLKP N++ D KL DFG A + +D + G+ Y P++ +
Sbjct: 133 DLKPENLLF----DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ------ 182
Query: 196 PVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK++ G+ D+WS+G+ LY + G LPF
Sbjct: 183 --GKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 249 SEEP---IYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 305 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 357 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 391
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 249 SEEP---IYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 305 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 357 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 391
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 24/210 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG+G+ G+V++ ++K G+ VA+K S D+Q ++E ++++ ++VK
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ IVME C GS+ +I+ T L E+E +L+ G+++L R +
Sbjct: 92 --SYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ-QFMSLYGTEEYLHPDMYERAVLR 194
HRD+K GNI+ + +G KL DFG A +L + + + GT ++ P++ +
Sbjct: 148 HRDIKAGNIL--LNTEGHA--KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE---- 199
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + D+WS+G+T +A G P+
Sbjct: 200 --IG--YNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 20 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + +++ + + GM +L ++
Sbjct: 76 YSTKPQ---LAIVTQWCEGSSLYHHLHASETKFEMKK--LIDIARQTARGMDYLHAKSII 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 131 HRDLKSNNI--FLHEDNTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 181
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 192 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 249 SEEP---IYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 305 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 357 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 391
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL--KKVKHENIVKLLA 75
LGKG F+ + + E A K + ++PH + E+ + + H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+ELC SL + + L E E L + G ++L NR++
Sbjct: 107 FFEDNDF--VFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLHRNRVI 161
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ +D K+ DFG A ++E D ++ L GT Y+ P++ +
Sbjct: 162 HRDLKLGNL--FLNEDLEV--KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK--- 214
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WSIG +Y + G PF
Sbjct: 215 ---GHSF--EVDVWSIGCIMYTLLVGKPPF 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 32/216 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL--KKVKHENIVKLLA 75
LGKG F+ + + E A K + ++PH + E+ + + H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNI------LDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
E+ + +V+ELC SL + L +PE Y L++ + G ++L
Sbjct: 83 FFEDNDF--VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---------IVLGCQYL 131
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMY 188
NR++HRDLK GN+ F+ +D K+ DFG A ++E D ++ L GT Y+ P++
Sbjct: 132 HRNRVIHRDLKLGNL--FLNEDLEV--KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL 187
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G +F VD+WSIG +Y + G PF
Sbjct: 188 SKK------GHSF--EVDVWSIGCIMYTLLVGKPPF 215
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ---MREFEVLKKVKHE 68
+ LG G G V G ++ G VAVK N+ +R DV RE + LK +H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMK 127
+I+KL + +VME +GG LF+ + +G ++E E + + + + +
Sbjct: 72 HIIKLYQVISTPTDF--FMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVD 125
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
+ + +VHRDLKP N++ D K+ DFG + + + + + G+ Y P++
Sbjct: 126 YCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181
Query: 188 YERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
G+ + G VD+WS GV LY + G LPF
Sbjct: 182 IS--------GRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVL--KKVKHENIVKLLA 75
LGKG F+ + + E A K + ++PH + E+ + + H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+ELC SL + + L E E L + G ++L NR++
Sbjct: 109 FFEDNDF--VFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ +D K+ DFG A ++E D ++ L GT Y+ P++ +
Sbjct: 164 HRDLKLGNL--FLNEDLEV--KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK--- 216
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WSIG +Y + G PF
Sbjct: 217 ---GHSF--EVDVWSIGCIMYTLLVGKPPF 241
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LG+G G V + N GE VAVK + + RE E+L+ + HE+IVK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+Q + +VME GSL + L P + GL + LL + + GM +L
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLA--QLLLFAQQICEGMAYLHAQH 132
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+HR L N++ D + K+ DFG A+ + E ++ + E+ P +
Sbjct: 133 YIHRALAARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRV--REDGDSPVFWYAPEC 186
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVAT 219
K F D+WS GVTLY + T
Sbjct: 187 LKEC--KFYYASDVWSFGVTLYELLT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT + M P + ++E +V+KK++HE +V+L A+
Sbjct: 275 LGQGCFGEVWMGT-WNGTTRVAIKTL-KPGTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 332 SEEP---IYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 388 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 439
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 440 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 474
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N + VA+KT M P + E +++KK+KH+ +V+L A+
Sbjct: 17 LGNGQFGEVWMGTWNGNTK-VAIKTLKP-GTMSPESF-LEEAQIMKKLKHDKLVQLYAVV 73
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E GSL + L D E L+ + + + AGM ++ +HR
Sbjct: 74 SEEP---IYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKPV 197
DL+ NI+ I K+ DFG AR L ED + + G + + E A+ +
Sbjct: 130 DLRSANILV----GNGLICKIADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGR-- 182
Query: 198 GKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
F D+WS G+ L + T G + PY G N+E +
Sbjct: 183 ---FTIKSDVWSFGILLTELVTKGRV---PYPGMNNREVL 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LG+G G V + N GE VAVK + + RE E+L+ + HE+IVK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+Q + +VME GSL + L P + GL + LL + + GM +L
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLA--QLLLFAQQICEGMAYLHAQH 131
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+HR L N++ D + K+ DFG A+ + E ++ + E+ P +
Sbjct: 132 YIHRALAARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRV--REDGDSPVFWYAPEC 185
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVAT 219
K F D+WS GVTLY + T
Sbjct: 186 LKEC--KFYYASDVWSFGVTLYELLT 209
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV+E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 139 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 139 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IVME + G L + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 139 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT +M P + ++E +V+KK++HE +V+L A+
Sbjct: 193 LGQGCFGEVWMGT-WNGTTRVAIKTLKP-GNMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 250 SEEP---IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG R L ED ++ + G + + E A+
Sbjct: 306 DLRAANILVGENLVC-------KVADFGLGR-LIEDNEYTARQGAKFPIKWTAPEAALYG 357
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 358 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 392
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ---MREFEVLKKVKHE 68
+ LG G G V G ++ G VAVK N+ +R DV RE + LK +H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMK 127
+I+KL + +VME +GG LF+ + +G ++E E + + + + +
Sbjct: 72 HIIKLYQVISTPTDF--FMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVD 125
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
+ + +VHRDLKP N++ D K+ DFG + + + + G+ Y P++
Sbjct: 126 YCHRHMVVHRDLKPENVLL----DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 188 YERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
G+ + G VD+WS GV LY + G LPF
Sbjct: 182 IS--------GRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 19 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 76 SEEP---IYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 132 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 183
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 184 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 218
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 17 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 74 SEEP---IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 130 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 181
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 182 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 216
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 15 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 72 SEEP---IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 128 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 179
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 180 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V K++G VAVK + R ++ E +++ +H N+V++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR-RELLFNEVVIMRDYQHFNVVEMY--K 109
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G ++ME GG+L +I+ + L EE+ V E + + +L ++HR
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG ++ +D + L GT ++ P++ R++
Sbjct: 166 DIKSDSIL--LTLDGRV--KLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSL---- 217
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ VD+WS+G+ + + G P+
Sbjct: 218 ----YATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 139 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 17 VLGK-GATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL- 74
++G+ G G V++ NK A K + S D M E ++L H NIVKLL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILASCDHPNIVKLLD 74
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
A E I++E C GG++ ++ + E L E + +V + + +L DN++
Sbjct: 75 AFYYEN---NLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHDNKI 129
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFG--AARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+HRDLK GNI+ + DG KL DFG A Q+ S GT ++ P E +
Sbjct: 130 IHRDLKAGNILFTL--DGDI--KLADFGVSAKNTRTXIQRRDSFIGTPYWMAP---EVVM 182
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + D+WS+G+TL +A P
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 139 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRP----------HDVQMREFEVLKKV 65
LG GA G V KN A+K +Q R H+ E +LK +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
H NI+KL + E++ + +V E GG LF + N + E + +++ + +G
Sbjct: 104 DHPNIIKLFDVFEDK--KYFYLVTEFYEGGELF---EQIINRHKFDECDAANIMKQILSG 158
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTI-YKLTDFGAARELEEDQQFMSLYGTEEYLH 184
+ +L + +VHRD+KP NI+ + + S + K+ DFG + +D + GT Y+
Sbjct: 159 ICYLHKHNIVHRDIKPENIL--LENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
P+ VL+K + D+WS GV +Y + G + P+GG+ +++ +
Sbjct: 217 PE-----VLKKK----YNEKCDVWSCGVIMYILLCG---YPPFGGQNDQDII 256
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
A+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNAM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 30/290 (10%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHEN 69
T S +G GA G+V + +G +AVK F + H + RE +LK +KHEN
Sbjct: 55 TLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHEN 111
Query: 70 IVKLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGM 126
++ LL + E V ++ G L NI+ L ++ ++ + G+
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGL 167
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
K++ ++HRDLKP N+ + +D K+ DFG AR D + T Y P+
Sbjct: 168 KYIHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPE 221
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASG 246
+ + + TVD+WS+G + + TG F + + +T +
Sbjct: 222 IMLNWM-------HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAS 274
Query: 247 VISGTQTSE-NGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
VIS + E I+ +P N + +G L +L +L +D+ K
Sbjct: 275 VISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDK 324
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 33/248 (13%)
Query: 11 VWCTTSVLGKGATGAVFQGVNKNNGEPVAVKT-----FNQLSHMRPHDVQMREFEVLKKV 65
V+ V+GKG V + +N+ G+ AVK F + D++ RE + +
Sbjct: 27 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHML 85
Query: 66 KHENIVKLLAIEEEQEGRGKV-IVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLT 123
KH +IV+LL E G + +V E G L F I+ + + E + +
Sbjct: 86 KHPHIVELL---ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS-LYGTEEY 182
+++ DN ++HRD+KP ++ + S KL FG A +L E GT +
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVL-LASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 201
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTK 242
+ P++ V R+P GK VD+W GV L+ + +G LPF YG KE ++
Sbjct: 202 MAPEV----VKREPYGKP----VDVWGCGVILFILLSGCLPF--YG---TKERLF----- 243
Query: 243 KASGVISG 250
G+I G
Sbjct: 244 --EGIIKG 249
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 33/248 (13%)
Query: 11 VWCTTSVLGKGATGAVFQGVNKNNGEPVAVKT-----FNQLSHMRPHDVQMREFEVLKKV 65
V+ V+GKG V + +N+ G+ AVK F + D++ RE + +
Sbjct: 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHML 83
Query: 66 KHENIVKLLAIEEEQEGRGKV-IVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLT 123
KH +IV+LL E G + +V E G L F I+ + + E + +
Sbjct: 84 KHPHIVELL---ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS-LYGTEEY 182
+++ DN ++HRD+KP ++ + S KL FG A +L E GT +
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVL-LASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHF 199
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTK 242
+ P++ V R+P GK VD+W GV L+ + +G LPF YG KE ++
Sbjct: 200 MAPEV----VKREPYGKP----VDVWGCGVILFILLSGCLPF--YG---TKERLF----- 241
Query: 243 KASGVISG 250
G+I G
Sbjct: 242 --EGIIKG 247
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 36 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 92 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSII 146
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARE---LEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A E QF L G+ ++ P+ V
Sbjct: 147 HRDLKSNNI--FLHEDLTV--KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-----V 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 80 SEEP---IYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 136 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 187
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 188 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 16 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 72 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARE---LEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A E QF L G+ ++ P+ V
Sbjct: 127 HRDLKSNNI--FLHEDLTV--KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-----V 177
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 48/230 (20%)
Query: 17 VLGKGATGAVFQGV---NKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+GKG G V+ G N A+K+ ++++ M+ + +RE +++ + H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN--------TYGLQEEEFLLVLEHLTAG 125
+ I EG V++ +C G L + P+ ++GLQ + G
Sbjct: 88 IGIMLPPEGLPHVLLPYMCH-GDLLQFIRSPQRNPTVKDLISFGLQ----------VARG 136
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M++L + + VHRDL N M D S K+ DFG AR++ D+++ Y +++ H
Sbjct: 137 MEYLAEQKFVHRDLAARNCML----DESFTVKVADFGLARDI-LDREY---YSVQQHRH- 187
Query: 186 DMYERAVLRKPVGKT---------FGATVDLWSIGVTLYHVAT-GNLPFR 225
R PV T F D+WS GV L+ + T G P+R
Sbjct: 188 -------ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 44 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 100 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSII 154
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARE---LEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A E QF L G+ ++ P+ V
Sbjct: 155 HRDLKSNNI--FLHEDLTV--KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-----V 205
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 139 DLAAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMAGFVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P ++E +V+KK++HE +V+L A+
Sbjct: 23 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSPEAF-LQEAQVMKKLRHEKLVQLYAVV 79
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 80 SEEP---IYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 136 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEWTARQGAKFPIKWTAPEAALYG 187
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 188 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 222
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 66 TSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKAR------REVELHWRASQCPHIVR 119
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IV E GG LF+ + D E E + + + +++L
Sbjct: 120 IVDVYENLYAGRKCLLIVXECLDGGELFSRIQD-RGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E + T Y+ P++
Sbjct: 179 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG- 236
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + + D WS+GV Y + G PF
Sbjct: 237 -------PEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV+E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED + + G + + E A+
Sbjct: 139 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 16 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + GSL + L Y L+ + + + + +GM ++ VHR
Sbjct: 73 SEEP---IXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 128
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED + + G + + E A+
Sbjct: 129 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYG 180
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 181 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 50/232 (21%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM------REFEVLKKV 65
+ + + +G GA G+V ++K +GE VA+K + RP ++ RE +LK +
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-----RPFQSEIFAKRAYRELLLLKHM 80
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILD----------DPENTYGLQ--EE 113
+HEN++ LL + SL N D D + GL+ EE
Sbjct: 81 QHENVIGLLDV--------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEE 126
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQF 173
+ ++ + G+K++ +VHRDLKPGN+ + +D K+ DFG AR D +
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA--VNEDCEL--KILDFGLAR--HADAEM 180
Query: 174 MSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T Y P++ + + TVD+WS+G + + TG F+
Sbjct: 181 TGYVVTRWYRAPEVILSWM-------HYNQTVDIWSVGCIMAEMLTGKTLFK 225
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG+ G VF+G++ + VA+K + + +E VL + + K
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG-- 88
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+G I+ME GGS ++L E + +L+ + G+ +L + +HR
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL----RAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ-QFMSLYGTEEYLHPDMYERAVLRKP 196
D+K N++ + + G KL DFG A +L + Q + + GT ++ P++ +++
Sbjct: 145 DIKAANVL--LSEQGDV--KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS----- 195
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + D+WS+G+T +A G P
Sbjct: 196 ---AYDSKADIWSLGITAIELAKGEPP 219
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G G V+ G N VA+KT M P + ++E +V+KK++HE +V+L A+
Sbjct: 26 LGQGCFGEVWMG-TWNGTTRVAIKTLKP-GTMSP-EAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E+ IV E + G L + L Y L+ + + + + +GM ++ VHR
Sbjct: 83 SEEP---IYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 138 DLKPGNIM---KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
DL+ NI+ +C K+ DFG AR L ED ++ + G + + E A+
Sbjct: 139 DLRAANILVGENLVC-------KVADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+ F D+WS G+ L + T G + PY G N+E +
Sbjct: 191 R-----FTIKSDVWSFGILLTELTTKGRV---PYPGMVNREVL 225
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 27/232 (11%)
Query: 1 MSFLRGSTNY--------VWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPH 52
M+ LRG N ++ +GKG+ G V++G++ + E VA+K +
Sbjct: 2 MAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI 61
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
+ +E VL + I + + I+ME GGS ++L L+E
Sbjct: 62 EDIQQEITVLSQCDSPYITRYFG--SYLKSTKLWIIMEYLGGGSALDLL----KPGPLEE 115
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+L + G+ +L R +HRD+K N++ + + G KL DFG A +L + Q
Sbjct: 116 TYIATILREILKGLDYLHSERKIHRDIKAANVL--LSEQGDV--KLADFGVAGQLTDTQI 171
Query: 173 FMSLY-GTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + GT ++ P++ +++ + D+WS+G+T +A G P
Sbjct: 172 KRNXFVGTPFWMAPEVIKQSA--------YDFKADIWSLGITAIELAKGEPP 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 15 TSVLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENI 70
VLG GA G V++G+ GE PVA+K N+ + + + M E ++ + H ++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
V+LL + + +V +L G L + + ++ G Q L + GM +L
Sbjct: 80 VRLLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNWCVQIAKGMMYLE 134
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ RLVHRDL N++ K+TDFG AR LE D++ + G + + E
Sbjct: 135 ERRLVHRDLAARNVLV----KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
RK F D+WS GVT++ + T +PY G +E
Sbjct: 191 IHYRK-----FTHQSDVWSYGVTIWELMT--FGGKPYDGIPTRE 227
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 18 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 74 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 128
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 129 HRDLKSNNI--FLHEDLTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 179
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ + + G VA+K +RE +LK++ H NIV L+ +
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ R +V E L +LD EN GLQ+ + + L L G+ H +R++H
Sbjct: 88 IHSE--RCLTLVFEFMEK-DLKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I DG+ KL DFG AR + + T Y PD+ +
Sbjct: 143 RDLKPQNLL--INSDGAL--KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS---- 194
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
K + +VD+WSIG + TG P P
Sbjct: 195 ---KKYSTSVDIWSIGCIFAEMITGK-PLFP 221
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ + + G VA+K +RE +LK++ H NIV L+ +
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ R +V E L +LD EN GLQ+ + + L L G+ H +R++H
Sbjct: 88 IHSE--RCLTLVFEFMEK-DLKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILH 142
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I DG+ KL DFG AR + + T Y PD+ +
Sbjct: 143 RDLKPQNLL--INSDGAL--KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS---- 194
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
K + +VD+WSIG + TG P P
Sbjct: 195 ---KKYSTSVDIWSIGCIFAEMITGK-PLFP 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G+ + ++K AVK ++ ++++ +L+ +H NI+ L +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI----LLRYGQHPNIITLKDVY 85
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ G+ +V EL GG L LD E E VL +T +++L +VHR
Sbjct: 86 DD--GKYVYVVTELMKGGEL---LDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHR 140
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DLKP NI+ ++ DFG A++L E+ M+ T ++ P++ ER
Sbjct: 141 DLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER------ 194
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + A D+WS+GV LY + TG PF
Sbjct: 195 --QGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 90
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 147 IHSADIIHRDLKPSNLA--VNEDSEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 200
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 201 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 252
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 301
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 21 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 77 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 131
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 132 HRDLKSNNI--FLHEDLTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 182
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 33 SPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 89
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 146 IHSADIIHRDLKPSNLA--VNEDXEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 199
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 200 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 251
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 300
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 90
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 147 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 200
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 201 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 252
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 301
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 16 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 72 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 127 HRDLKSNNI--FLHEDLTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 177
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHM--RPHDVQMREFEVLKKVKHENIVKLLA 75
+G+G V++ +G PVA+K M + ++E ++LK++ H N++K A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 76 --IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRDN 132
IE+ + IV+EL G L ++ + L E + L + ++H+
Sbjct: 100 SFIEDNELN----IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM-SLYGTEEYLHPDMYERA 191
R++HRD+KP N+ FI G + KL D G R SL GT Y+ P+
Sbjct: 156 RVMHRDIKPANV--FITATG--VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN 211
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
G F + D+WS+G LY +A PF YG + N
Sbjct: 212 ------GYNFKS--DIWSLGCLLYEMAALQSPF--YGDKMN 242
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 21 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 77 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 131
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 132 HRDLKSNNI--FLHEDLTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 182
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 86
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 143 IHSADIIHRDLKPSNLA--VNEDSEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 196
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 197 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 248
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 43 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 99 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKFEMIK--LIDIARQTAQGMDYLHAKSII 153
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 154 HRDLKSNNI--FLHEDLTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 204
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K N+ + + + M E ++ + H ++V+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
LL + + +V +L G L + + ++ G Q L + GM +L +
Sbjct: 105 LLGVCLSPTIQ---LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNWCVQIAKGMMYLEER 159
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
RLVHRDL N++ K+TDFG AR LE D++ + G + + E
Sbjct: 160 RLVHRDLAARNVLV----KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
RK F D+WS GVT++ + T +PY G +E
Sbjct: 216 YRK-----FTHQSDVWSYGVTIWELMT--FGGKPYDGIPTRE 250
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 3 FLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFN---QLSHMRPHDVQMREF 59
F + ++ +G G+ GAV+ + N E VA+K + + S+ + D+ ++E
Sbjct: 8 FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEV 66
Query: 60 EVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGS--LFNILDDPENTYGLQEEEFLL 117
L+K++H N ++ + +VME C G + L + P LQE E
Sbjct: 67 RFLQKLRHPNTIQYRGCYLREHT--AWLVMEYCLGSASDLLEVHKKP-----LQEVEIAA 119
Query: 118 VLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY 177
V G+ +L + ++HRD+K GNI+ + + G + KL DFG+A + F+
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNIL--LSEPG--LVKLGDFGSASIMAPANXFV--- 172
Query: 178 GTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMY 237
GT ++ P++ +L G+ + VD+WS+G+T +A P +Y
Sbjct: 173 GTPYWMAPEV----ILAMDEGQ-YDGKVDVWSLGITCIELAERKPPLF---NMNAMSALY 224
Query: 238 YITTKKASGVISG 250
+I ++ + SG
Sbjct: 225 HIAQNESPALQSG 237
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 50/232 (21%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM------REFEVLKKV 65
+ + + +G GA G+V ++K +GE VA+K + RP ++ RE +LK +
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-----RPFQSEIFAKRAYRELLLLKHM 98
Query: 66 KHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILD----------DPENTYGLQ--EE 113
+HEN++ LL + SL N D D + G++ EE
Sbjct: 99 QHENVIGLLDV--------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEE 144
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQF 173
+ ++ + G+K++ +VHRDLKPGN+ + +D K+ DFG AR D +
Sbjct: 145 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA--VNEDCEL--KILDFGLAR--HADAEM 198
Query: 174 MSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T Y P++ + + TVD+WS+G + + TG F+
Sbjct: 199 TGYVVTRWYRAPEVILSWM-------HYNQTVDIWSVGCIMAEMLTGKTLFK 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 89
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 146 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 199
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 200 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 251
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 300
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 44 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 100 YSTKPQ---LAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 154
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 155 HRDLKSNNI--FLHEDLTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 205
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVLKKVKHENIVKLL 74
++G+G+ G V + NK+ G VA+K F + + + MRE ++LK+++HEN+V LL
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPE-NTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ +++ + +V E ILDD E GL + L + G+ +
Sbjct: 91 EVCKKK--KRWYLVFEFVD----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ-FMSLYGTEEYLHPDMYERAV 192
++HRD+KP NI+ S + KL DFG AR L + + T Y P++ V
Sbjct: 145 IIHRDIKPENILV----SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV 200
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+G VD+W+IG + + G P P G + + +Y+I
Sbjct: 201 -------KYGKAVDVWAIGCLVTEMFMGE-PLFP--GDSDIDQLYHI 237
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LG+G G V + N GE VAVK + +E ++L+ + HE+I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+Q + +VME GSL + L P ++ GL + LL + + GM +L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLA--QLLLFAQQICEGMAYLHSQH 137
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM-YERAV 192
+HR+L N++ D + K+ DFG A+ + E ++ + E+ P Y
Sbjct: 138 YIHRNLAARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRV--REDGDSPVFWYAPEC 191
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT 219
L++ F D+WS GVTLY + T
Sbjct: 192 LKE---YKFYYASDVWSFGVTLYELLT 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + G VAVK ++ + H + RE +LK V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKTLEEFQDVYLVMEL-MDANLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR + T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTACTNFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+G + A VD+WS+G + + G + F+
Sbjct: 198 ----LGMGYAANVDIWSVGCIMGELVKGCVIFQ 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDXEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 80
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 136
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 137 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMAGFVATRWYRAPEIM 190
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 191 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 242
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 89
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 146 IHSADIIHRDLKPSNLA--VNEDXEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 199
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 200 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 251
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 300
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 76
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++F + E + P+
Sbjct: 135 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 191 ES--------KFSVASDVWSFGVVLYELFT 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 85 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L + VHRDL N M + D + K+ DFG R++ E + G + L
Sbjct: 143 MAYLNAKKFVHRDLAARNCM--VAHDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 196
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 197 RWMAPESLKDGV---FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 245
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEV-LKKVKHENIVK 72
T+ VLG G G V Q NK E A+K R RE E+ + + +IV+
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKAR------REVELHWRASQCPHIVR 75
Query: 73 LLAIEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
++ + E K +IVME GG LF+ + D E E +++ + +++L
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
+ HRD+KP N++ + + I KLTDFG A+E
Sbjct: 135 SINIAHRDVKPENLL-YTSKRPNAILKLTDFGFAKET----------------------- 170
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ + + D+WS+GV +Y + G PF
Sbjct: 171 ------TGEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 80
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 136
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 137 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 190
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 191 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 242
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMAGFVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 85 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L + VHRDL N M + D + K+ DFG R++ E + G + L
Sbjct: 143 MAYLNAKKFVHRDLAARNCM--VAHDFTV--KIGDFGMTRDIYETAYYRK--GGKGLLPV 196
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 197 RWMAPESLKDGV---FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 245
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 90
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 147 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 200
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 201 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 252
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 301
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGXVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 81
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 137
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 138 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 191
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 192 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 243
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 244 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 292
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLLA 75
+G G+ G V++G K +G+ VAVK N ++ P +Q E VL+K +H NI+ +
Sbjct: 16 IGSGSFGTVYKG--KWHGD-VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ IV + C G SL++ L E + + + + + GM +L ++
Sbjct: 72 YSTAPQ---LAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYERAV 192
HRDLK NI F+ +D + K+ DFG A QF L G+ ++ P+ V
Sbjct: 127 HRDLKSNNI--FLHEDLTV--KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-----V 177
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+R + D+++ G+ LY + TG LP+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR--EFEVLKKVKHENIVKLLA 75
LGKG ++ + + E A K + ++PH + E + K + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+E+C SL + + + E E + G+++L +NR++
Sbjct: 110 FFEDDDF--VYVVLEICRRRSLLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ DD K+ DFG A ++E D ++ +L GT Y+ P++ +
Sbjct: 165 HRDLKLGNL--FLNDDMDV--KIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKK--- 217
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WS+G LY + G PF
Sbjct: 218 ---GHSF--EVDIWSLGCILYTLLVGKPPF 242
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 81
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 137
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 138 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 191
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 192 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 243
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 244 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 292
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGV---NKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ +N VA+KT + + ++E +++ H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L Y L +L L+ + +L R
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 133 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 185
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 186 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 225
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 226 --ENGER---LPMPPNCPPTL 241
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 89
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 145
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 146 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 199
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 200 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 251
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 300
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 27 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 83
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 139
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 140 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 193
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 194 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 245
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 246 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 294
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 91
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 148 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 201
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 202 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 253
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 302
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
++G G +G V G + G+ PVA+K R + E ++ + H NI++L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ GR +IV E GSL L + + + + + +L + AGM++L D
Sbjct: 116 EGVV--TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ--LVGMLRGVGAGMRYLSDLG 171
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
VHRDL N++ D + + K++DFG +R LE+D + Y T P +
Sbjct: 172 YVHRDLAARNVLV----DSNLVCKVSDFGLSRVLEDDPD--AAYTTTGGKIPIRW--TAP 223
Query: 194 RKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETM 236
+TF + D+WS GV ++ V A G RPY N++ +
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGE---RPYWNMTNRDVI 264
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V K+ G+ VAVK + R ++ E +++ H+N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR-RELLFNEVVIMRDYHHDNVVDMYS-- 109
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GG+L +I+ + EE+ V + + +L + ++HR
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG A+ +E + L GT ++ P++ R
Sbjct: 166 DIKSDSIL--LTSDGRI--KLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRL----- 216
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD+WS+G+ + + G P+
Sbjct: 217 ---PYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 85 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE-DQQFMSLYG--TEEY 182
M +L + VHRDL N M + D + K+ DFG R++ E D G +
Sbjct: 143 MAYLNAKKFVHRDLAARNCM--VAHDFTV--KIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ P+ + V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 199 MAPESLKDGV--------FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 245
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 82 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE-DQQFMSLYG--TEEY 182
M +L + VHRDL N M + D + K+ DFG R++ E D G +
Sbjct: 140 MAYLNAKKFVHRDLAARNCM--VAHDFTV--KIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ P+ + V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 196 MAPESLKDGV--------FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 242
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ + P VA+KT + + ++E +++ H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L Y L +L L+ + +L R
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 133 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 185
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 186 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 225
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 226 --ENGER---LPMPPNCPPTL 241
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 85 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE-DQQFMSLYG--TEEY 182
M +L + VHRDL N M + D + K+ DFG R++ E D G +
Sbjct: 143 MAYLNAKKFVHRDLAARNCM--VAHDFTV--KIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ P+ + V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 199 MAPESLKDGV--------FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 245
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 26 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 82
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 83 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 138
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 139 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 192
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 193 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 244
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 245 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 293
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 86
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 143 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 196
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 197 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 248
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 90
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 146
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 147 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 200
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 201 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 252
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 253 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 301
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
+G GA G+V + + VAVK F L H R RE +LK +KHEN++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR---RTYRELRLLKHLKHENVIGL 92
Query: 74 LAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
L + E +V ++ G L NI+ + L +E ++ L G+K++
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
++HRDLKP N+ + +D ++ DFG AR + D++ T Y P++
Sbjct: 149 SAGIIHRDLKPSNVA--VNEDSEL--RILDFGLAR--QADEEMTGYVATRWYRAPEIMLN 202
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + TVD+WS+G + + G F
Sbjct: 203 WM-------HYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 86
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 143 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 196
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 197 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 248
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 95
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 151
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 152 IHSADIIHRDLKPSNLA--VNEDXEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 205
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 206 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 257
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 258 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 306
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LG+G G V + N GE VAVK + +E ++L+ + HE+I+K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+Q + +VME GSL + L P ++ GL + LL + + GM +L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLA--QLLLFAQQICEGMAYLHAQH 137
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM-YERAV 192
+HR+L N++ D + K+ DFG A+ + E ++ + E+ P Y
Sbjct: 138 YIHRNLAARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRV--REDGDSPVFWYAPEC 191
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT 219
L++ F D+WS GVTLY + T
Sbjct: 192 LKE---YKFYYASDVWSFGVTLYELLT 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 107
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 163
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 164 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMXGYVATRWYRAPEIM 217
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 218 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 269
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 270 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 318
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 1 MSFLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFE 60
M L+ ++ +GKG+ G VF+G++ + VA+K + + +E
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 72
Query: 61 VLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE 120
VL + + K + I+ME GGS ++L+ L E + +L
Sbjct: 73 VLSQCDSPYVTKYYG--SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILR 126
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GT 179
+ G+ +L + +HRD+K N++ + + G KL DFG A +L + Q + + GT
Sbjct: 127 EILKGLDYLHSEKKIHRDIKAANVL--LSEHGEV--KLADFGVAGQLTDTQIKRNXFVGT 182
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
++ P++ +++ + + D+WS+G+T +A G P
Sbjct: 183 PFWMAPEVIKQS--------AYDSKADIWSLGITAIELARGEPP 218
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 28/238 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN---QLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G G+ GAV+ + N E VA+K + + S+ + D+ ++E L+K++H N ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRHPNTIQYR 120
Query: 75 AIEEEQEGRGKVIVMELCTGGS--LFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
+ +VME C G + L + P LQE E V G+ +L +
Sbjct: 121 GCYLREHT--AWLVMEYCLGSASDLLEVHKKP-----LQEVEIAAVTHGALQGLAYLHSH 173
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRD+K GNI+ + + G + KL DFG+A + F+ GT ++ P++ +
Sbjct: 174 NMIHRDVKAGNIL--LSEPG--LVKLGDFGSASIMAPANXFV---GTPYWMAPEV----I 222
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISG 250
L G+ + VD+WS+G+T +A P +Y+I ++ + SG
Sbjct: 223 LAMDEGQ-YDGKVDVWSLGITCIELAERKPPLF---NMNAMSALYHIAQNESPALQSG 276
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 86
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 142
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 143 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 196
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 197 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 248
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 297
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 84 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L + VHRDL N M + D + K+ DFG R++ E + G + L
Sbjct: 142 MAYLNAKKFVHRDLAARNCM--VAHDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 195
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 196 RWMAPESLKDGV---FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 244
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ + L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KSQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG R D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDSEL--KILDFGLCR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
RE ++ H+NIV ++ ++EE + +VME G +L + E+ L + +
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCY--YLVMEYIEGPTLSEYI---ESHGPLSVDTAI 114
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ--QFM 174
+ G+KH D R+VHRD+KP NI+ D + K+ DFG A+ L E Q
Sbjct: 115 NFTNQILDGIKHAHDMRIVHRDIKPQNILI----DSNKTLKIFDFGIAKALSETSLTQTN 170
Query: 175 SLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
+ GT +Y P+ + G+ D++SIG+ LY + G PF N E
Sbjct: 171 HVLGTVQYFSPEQAK--------GEATDECTDIYSIGIVLYEMLVGEPPF-------NGE 215
Query: 235 TMYYITTK 242
T I K
Sbjct: 216 TAVSIAIK 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHE 68
+ LG+G+ G V + + VA+K F ++ D+ MR E LK ++H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALK-FISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+I+KL + V+V+E GG LF+ + + + + E+E + + +++
Sbjct: 70 HIIKLYDVITTPTD--IVMVIEY-AGGELFDYIVEKKR---MTEDEGRRFFQQIICAIEY 123
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+++VHRDLKP N++ DD + K+ DFG + + + + G+ Y P++
Sbjct: 124 CHRHKIVHRDLKPENLL---LDDNLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 179
Query: 189 ERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS G+ LY + G LPF
Sbjct: 180 N--------GKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGV---NKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ +N VA+KT + + ++E +++ H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L + L +L L+ + +L R
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ D KL DFG +R +E+ + + G +++ P E
Sbjct: 133 VHRDIAARNVLVSATD----CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 185
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 186 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 225
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 226 --ENGER---LPMPPNCPPTL 241
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ + P VA+KT + + ++E +++ H +IVKL+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L Y L +L L+ + +L R
Sbjct: 106 GVITENP---VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESKRF 160
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 161 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 213
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 214 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 253
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 254 --ENGER---LPMPPNCPPTL 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR--EFEVLKKVKHENIVKLLA 75
LGKG ++ + + E A K + ++PH + E + K + + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+E+C SL + + + E E + G+++L +NR++
Sbjct: 94 FFEDDDF--VYVVLEICRRRSLLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 148
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ DD K+ DFG A ++E D ++ L GT Y+ P++ +
Sbjct: 149 HRDLKLGNL--FLNDDMDV--KIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK--- 201
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WS+G LY + G PF
Sbjct: 202 ---GHSF--EVDIWSLGCILYTLLVGKPPF 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 96
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 152
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 153 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 206
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 207 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 258
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 307
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 95
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 151
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 152 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 205
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 206 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 257
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 258 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 306
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 96
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 152
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 153 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 206
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 207 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 258
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 307
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 80
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 136
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 137 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 190
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 191 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 242
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
++G G +G V G + G+ PVA+K R + E ++ + H NI++L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ GR +IV E GSL L + + + + + +L + AGM++L D
Sbjct: 116 EGVV--TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ--LVGMLRGVGAGMRYLSDLG 171
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ-QFMSLYGTEEYLHPDMYERAV 192
VHRDL N++ D + + K++DFG +R LE+D + G + + E
Sbjct: 172 YVHRDLAARNVLV----DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETM 236
R TF + D+WS GV ++ V A G RPY N++ +
Sbjct: 228 FR-----TFSSASDVWSFGVVMWEVLAYGE---RPYWNMTNRDVI 264
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG+ G VF+G++ + VA+K + + +E VL + + K
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-- 72
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ME GGS ++L+ L E + +L + G+ +L + +HR
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKKIHR 128
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ-QFMSLYGTEEYLHPDMYERAVLRKP 196
D+K N++ + + G KL DFG A +L + Q + + GT ++ P++ +++
Sbjct: 129 DIKAANVL--LSEHGEV--KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA---- 180
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + D+WS+G+T +A G P
Sbjct: 181 ----YDSKADIWSLGITAIELARGEPP 203
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK---RTYRELRLLKHMKHENVI 96
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 152
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 153 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 206
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 207 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 258
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 307
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 80
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCAKLTDDHVQFLIYQILRGLKY 136
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 137 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 190
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 191 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 242
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 291
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR--EFEVLKKVKHENIVKLLA 75
LGKG ++ + + E A K + ++PH + E + K + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+E+C SL + + + E E + G+++L +NR++
Sbjct: 110 FFEDDDF--VYVVLEICRRRSLLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ DD K+ DFG A ++E D ++ L GT Y+ P++ +
Sbjct: 165 HRDLKLGNL--FLNDDMDV--KIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK--- 217
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WS+G LY + G PF
Sbjct: 218 ---GHSF--EVDIWSLGCILYTLLVGKPPF 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 104
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 160
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 161 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 214
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 215 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 266
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 267 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 315
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR--EFEVLKKVKHENIVKLLA 75
LGKG ++ + + E A K + ++PH + E + K + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+ + +V+E+C SL + + + E E + G+++L +NR++
Sbjct: 110 FFEDDDF--VYVVLEICRRRSLLELH---KRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLK GN+ F+ DD K+ DFG A ++E D ++ L GT Y+ P++ +
Sbjct: 165 HRDLKLGNL--FLNDDMDV--KIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKK--- 217
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G +F VD+WS+G LY + G PF
Sbjct: 218 ---GHSF--EVDIWSLGCILYTLLVGKPPF 242
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V ++ G L+ +L T L + L + G+K++
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLL----KTQHLSNDHICYFLYQILRGLKYI 160
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLHP 185
++HRDLKP N++ D K+ DFG AR + D F++ Y T Y P
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXD----LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ + K + ++D+WS+G L + + N P P
Sbjct: 217 EIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 249
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ + P VA+KT + + ++E +++ H +IVKL+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L Y L +L L+ + +L R
Sbjct: 75 GVITENP---VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESKRF 129
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 130 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 182
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 183 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 222
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 223 --ENGER---LPMPPNCPPTL 238
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ + P VA+KT + + ++E +++ H +IVKL+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L Y L +L L+ + +L R
Sbjct: 83 GVITENP---VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 138 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 190
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 191 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 230
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 231 --ENGER---LPMPPNCPPTL 246
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ + P VA+KT + + ++E +++ H +IVKL+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L Y L +L L+ + +L R
Sbjct: 80 GVITENP---VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESKRF 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 135 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 187
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 188 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 227
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 228 --ENGER---LPMPPNCPPTL 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 103
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 159
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 160 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 213
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 214 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 265
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 266 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 314
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
+G GA G+V + + VAVK F L H R RE +LK +KHEN++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR---RTYRELRLLKHLKHENVIGL 92
Query: 74 LAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
L + E +V ++ G L NI+ L +E ++ L G+K++
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
++HRDLKP N+ + +D ++ DFG AR + D++ T Y P++
Sbjct: 149 SAGIIHRDLKPSNVA--VNEDSEL--RILDFGLAR--QADEEMTGYVATRWYRAPEIMLN 202
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + TVD+WS+G + + G F
Sbjct: 203 WM-------HYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ + P VA+KT + + ++E +++ H +IVKL+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L Y L +L L+ + +L R
Sbjct: 81 GVITENP---VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAYLESKRF 135
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 136 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 188
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 189 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 228
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 229 --ENGER---LPMPPNCPPTL 244
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
+G GA G+V + + VAVK F L H R RE +LK +KHEN++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR---RTYRELRLLKHLKHENVIGL 84
Query: 74 LAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
L + E +V ++ G L NI+ L +E ++ L G+K++
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
++HRDLKP N+ + +D ++ DFG AR + D++ T Y P++
Sbjct: 141 SAGIIHRDLKPSNVA--VNEDCEL--RILDFGLAR--QADEEMTGYVATRWYRAPEIMLN 194
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + TVD+WS+G + + G F
Sbjct: 195 WM-------HYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 107
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 163
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 164 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 217
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 218 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 269
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 270 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 318
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 27 LGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 84 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED ++ + G + ++ P+
Sbjct: 140 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYG--- 191
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 192 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 78 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED ++ + G + ++ P+
Sbjct: 134 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYG--- 185
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 220
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 16 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 73 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED ++ + G + ++ P+
Sbjct: 129 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYG--- 180
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 181 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 215
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 103
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 159
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 160 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 213
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 214 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 265
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 266 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 314
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 26 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 83 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED ++ + G + ++ P+
Sbjct: 139 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYG--- 190
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 191 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG+ G VF+G++ + VA+K + + +E VL + + K
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-- 92
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ME GGS ++L+ L E + +L + G+ +L + +HR
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKKIHR 148
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ-QFMSLYGTEEYLHPDMYERAVLRKP 196
D+K N++ + + G KL DFG A +L + Q + + GT ++ P++ +++
Sbjct: 149 DIKAANVL--LSEHGEV--KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA---- 200
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + D+WS+G+T +A G P
Sbjct: 201 ----YDSKADIWSLGITAIELARGEPP 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ D+G AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDYGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG+ G VF+G++ + VA+K + + +E VL + + K
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG-- 72
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ME GGS ++L+ L E + +L + G+ +L + +HR
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKKIHR 128
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVLRKP 196
D+K N++ + + G KL DFG A +L + Q + + GT ++ P++ +++
Sbjct: 129 DIKAANVL--LSEHGEV--KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS----- 179
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLP 223
+ + D+WS+G+T +A G P
Sbjct: 180 ---AYDSKADIWSLGITAIELARGEPP 203
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 104
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 160
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 161 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIM 214
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 215 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 266
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 267 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 315
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 26/236 (11%)
Query: 13 CTT--SVLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVK 66
C T V+G G G V++G+ K + PVA+KT + + E ++ +
Sbjct: 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 67 HENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGM 126
H NI++L + + + +I+ E G+L L + + + + + + +L + AGM
Sbjct: 105 HHNIIRLEGVISKY--KPMMIITEYMENGALDKFLREKDGEFSVLQ--LVGMLRGIAAGM 160
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
K+L + VHRDL NI+ + + + K++DFG +R LE+D + + Y T P
Sbjct: 161 KYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLEDDPE--ATYTTSGGKIPI 214
Query: 187 MY---ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ E RK F + D+WS G+ ++ V T RPY N E M I
Sbjct: 215 RWTAPEAISYRK-----FTSASDVWSFGIVMWEVMTYGE--RPYWELSNHEVMKAI 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LG+G G V + N GE VAVK+ S +E E+L+ + HENIVK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
I E G G ++ME GSL L +N L+++ L + GM +L +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ--LKYAVQICKGMDYLGSRQ 134
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
VHRDL N++ + K+ DFG + +E D++ ++ + + P+
Sbjct: 135 YVHRDLAARNVLV----ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
++ F D+WS GVTL+ + T
Sbjct: 191 QS--------KFYIASDVWSFGVTLHELLT 212
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + G VAVK ++ + H + RE +LK V H+NI+ LL +
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 90 FTPQKTLEEFQDVYLVMEL-MDANLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSA 143
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR + T Y P++
Sbjct: 144 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTASTNFMMTPYVVTRYYRAPEVI---- 195
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+G + VD+WS+G + + G++ F+
Sbjct: 196 ----LGMGYKENVDIWSVGCIMGELVKGSVIFQ 224
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 104
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 160
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 161 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMXGXVATRWYRAPEIM 214
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 215 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 266
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I +P N + +G L +L +L +DS K
Sbjct: 267 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 315
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LG+G G V + N GE VAVK+ S +E E+L+ + HENIVK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
I E G G ++ME GSL L +N L+++ L + GM +L +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ--LKYAVQICKGMDYLGSRQ 146
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
VHRDL N++ + K+ DFG + +E D++ ++ + + P+
Sbjct: 147 YVHRDLAARNVLV----ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
++ F D+WS GVTL+ + T
Sbjct: 203 QS--------KFYIASDVWSFGVTLHELLT 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 19/173 (10%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDD-PENTYGLQEEEF 115
+E ++L++++H+N+++L+ + +E + +VME C G + +LD PE + + +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHG 113
Query: 116 LLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE---DQQ 172
L G+++L +VH+D+KPGN++ G T+ K++ G A L D
Sbjct: 114 YFC--QLIDGLEYLHSQGIVHKDIKPGNLL---LTTGGTL-KISALGVAEALHPFAADDT 167
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
+ G+ + P++ TF G VD+WS GVTLY++ TG PF
Sbjct: 168 CRTSQGSPAFQPPEIANGL-------DTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 31 LGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 88 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED ++ + G + ++ P+
Sbjct: 144 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYG--- 195
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 196 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 32/287 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
+G GA G+V + G VAVK F + H + RE +LK +KHEN++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVIGL 96
Query: 74 LAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
L + E V ++ G L NI+ L ++ ++ + G+K++
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
++HRDLKP N+ + +D K+ DFG AR D + T Y P++
Sbjct: 153 SADIIHRDLKPSNLA--VNEDCEL--KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 206
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASGVI 248
+ + TVD+WS+G + + TG F P + K + + T A +
Sbjct: 207 WM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAELLK 258
Query: 249 SGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ S I +P N + +G L +L +L +DS K
Sbjct: 259 KISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 305
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 25/226 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP--HDVQMREFEVLKKVKHENIVKLLA 75
+G+G+ G VF+ N++ G+ VA+K F + S P + +RE +LK++KH N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLE-SEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + R +V E C ++ + LD + G+ E + + + +
Sbjct: 70 VFRRK--RRLHLVFEYCD-HTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM-SLYGTEEYLHPDMYERAVLR 194
HRD+KP NI+ ++ KL DFG AR L + T Y P++
Sbjct: 125 HRDVKPENILI----TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL------ 174
Query: 195 KPVGKT-FGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
VG T +G VD+W+IG + +G +P P G+ + + +Y I
Sbjct: 175 --VGDTQYGPPVDVWAIGCVFAELLSG-VPLWP--GKSDVDQLYLI 215
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V +++G+ VAVK + R ++ E +++ +HEN+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMY--N 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GG+L +I+ + EE+ V + + L ++HR
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG A+ +E + L GT ++ P++ R
Sbjct: 141 DIKSDSIL--LTHDGRV--KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL----- 191
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD+WS+G+ + + G P+
Sbjct: 192 ---PYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 85 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L + VHR+L N M + D + K+ DFG R++ E + G + L
Sbjct: 143 MAYLNAKKFVHRNLAARNCM--VAHDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 196
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 197 RWMAPESLKDGV---FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGV---NKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ +N VA+KT + + ++E +++ H +IVKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L + L +L L+ + +L R
Sbjct: 458 GVITENP---VWIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ D KL DFG +R +E+ + + G +++ P E
Sbjct: 513 VHRDIAARNVLVSATD----CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 565
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 566 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 605
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 606 --ENGER---LPMPPNCPPTL 621
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V +++G+ VAVK + R ++ E +++ +HEN+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMY--N 93
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GG+L +I+ + EE+ V + + L ++HR
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG A+ +E + L GT ++ P++ R
Sbjct: 150 DIKSDSIL--LTHDGRV--KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL----- 200
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD+WS+G+ + + G P+
Sbjct: 201 ---PYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+GA G+V + V+K +G+ +AVK + + + +V+ + +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 78 EEQEGRGKVIVMELCTGG------SLFNILDD--PENTYGLQEEEFLLVLEHLTAGMKHL 129
+EG I MEL + ++++LDD PE G + L + A + HL
Sbjct: 90 LFREGDC-WICMELMSTSFDKFYKYVYSVLDDVIPEEILGK------ITLATVKA-LNHL 141
Query: 130 RDN-RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
++N +++HRD+KP NI+ D S KL DFG + +L + G Y+ P+
Sbjct: 142 KENLKIIHRDIKPSNILL----DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERI 197
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + R+ + D+WS+G+TLY +ATG P+
Sbjct: 198 DPSASRQ----GYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 18 LGKGATGAVFQGVNKN--NGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G+ G V++G ++ GE VAVKT N+ + +R + E V+K ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL----DDPENTYGLQE---EEFLLVLEHLTAG 125
LL + +G+ ++VMEL G L + L + EN G +E + + + G
Sbjct: 86 LLGV--VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP 185
M +L + VHR+L N M + D + K+ DFG R++ E + G + L
Sbjct: 144 MAYLNAKKFVHRNLAARNCM--VAHDFTV--KIGDFGMTRDIYETDYYRK--GGKGLLPV 197
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
L+ V F + D+WS GV L+ + + L +PY G N++ + ++
Sbjct: 198 RWMAPESLKDGV---FTTSSDMWSFGVVLWEITS--LAEQPYQGLSNEQVLKFV 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 196 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 229
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V +++G+ VAVK + R ++ E +++ +HEN+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMY--N 95
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GG+L +I+ + EE+ V + + L ++HR
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG A+ +E + L GT ++ P++ R
Sbjct: 152 DIKSDSIL--LTHDGRV--KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL----- 202
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD+WS+G+ + + G P+
Sbjct: 203 ---PYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G+ + ++K AVK ++ ++++ +L+ +H NI+ L +
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI----LLRYGQHPNIITLKDVY 85
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ G+ +V EL GG L LD E E VL +T +++L +VHR
Sbjct: 86 DD--GKYVYVVTELXKGGEL---LDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHR 140
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DLKP NI+ ++ DFG A++L E+ + T ++ P++ ER
Sbjct: 141 DLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLER------ 194
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + A D+WS+GV LY TG PF
Sbjct: 195 --QGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 198 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 34/290 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 91
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDM 187
+ ++HRDLKP N+ + +D K+ DFG AR ++ M+ Y T Y P++
Sbjct: 148 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLARHTADE---MTGYVATRWYRAPEI 200
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKAS 245
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 201 MLNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAE 252
Query: 246 GVISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 302
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 34/290 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 91
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDM 187
+ ++HRDLKP N+ + +D K+ DFG AR ++ M+ Y T Y P++
Sbjct: 148 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLARHTADE---MTGYVATRWYRAPEI 200
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKAS 245
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 201 MLNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAE 252
Query: 246 GVISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 302
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 148
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 204 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 237
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 196 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 229
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 34/290 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 91
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 147
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDM 187
+ ++HRDLKP N+ + +D K+ DFG AR ++ M+ Y T Y P++
Sbjct: 148 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFGLARHTADE---MTGYVATRWYRAPEI 200
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKAS 245
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 201 MLNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAE 252
Query: 246 GVISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 302
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREF----EVLKKVKHENIVKL 73
LG G G V+ G NN VAVKT ++P + ++ F ++K ++H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYY-NNSTKVAVKT------LKPGTMSVQAFLEEANLMKTLQHDKLVRL 73
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A+ +E I+ E GSL + L E L + + + GM ++
Sbjct: 74 YAVVTREEP--IYIITEYMAKGSLLDFLKSDEGGKVLLPK-LIDFSAQIAEGMAYIERKN 130
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+HRDL+ N++ S + K+ DFG AR + ED ++ + G + P +
Sbjct: 131 YIHRDLRAANVLV----SESLMCKIADFGLARVI-EDNEYTAREGAK---FPIKW----- 177
Query: 194 RKPVGKTFGATV---DLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
P FG D+WS G+ LY + T G + PY GR N + M
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKI---PYPGRTNADVM 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ DF AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDFYLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V +++G+ VAVK + R ++ E +++ +HEN+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMY--N 88
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GG+L +I+ + EE+ V + + L ++HR
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG A+ +E + L GT ++ P++ R
Sbjct: 145 DIKSDSIL--LTHDGRV--KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL----- 195
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD+WS+G+ + + G P+
Sbjct: 196 ---PYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 145
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 201 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 234
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 146
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 202 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 235
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 137
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 193 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 226
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 200 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 45 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 104
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 105 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 161
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 162 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 216
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 217 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V +++G+ VAVK + R ++ E +++ +HEN+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMY--N 215
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GG+L +I+ + EE+ V + + L ++HR
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG A+ +E + L GT ++ P++ R
Sbjct: 272 DIKSDSIL--LTHDGRV--KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL----- 322
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD+WS+G+ + + G P+
Sbjct: 323 ---PYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 21 LGAGQAGEVWMGYY-NGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 78 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 134 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINYG--- 185
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 220
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 25 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 85 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 141
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 196
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 197 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 142
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 197
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 198 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 142
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 197
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 198 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 138
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 194 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 18 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 77
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 78 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 134
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 135 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 189
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 190 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 21 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 80
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 81 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 137
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 138 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 192
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 193 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 160
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 216 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 249
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLHP 185
++HRDLKP N++ D K+ DFG AR + D F++ Y T Y P
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXD----LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ + K + ++D+WS+G L + + N P P
Sbjct: 197 EIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 138
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 194 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 227
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 23 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 83 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 139
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 140 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 194
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 195 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 77
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L + + + L + GM++L R
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKR 135
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+HR+L NI+ + K+ DFG + L +D+++ Y +E ++ A
Sbjct: 136 YIHRNLATRNILV----ENENRVKIGDFGLTKVLPQDKEY---YKVKEPGESPIFWYAPE 188
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVAT 219
K F D+WS GV LY + T
Sbjct: 189 SLTESK-FSVASDVWSFGVVLYELFT 213
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLHP 185
++HRDLKP N++ D K+ DFG AR + D F++ Y T Y P
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXD----LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ + K + ++D+WS+G L + + N P P
Sbjct: 201 EIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 24 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 84 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 140
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 141 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 195
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 196 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGV---NKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ +N VA+KT + + ++E +++ H +IVKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L + L +L L+ + +L R
Sbjct: 458 GVITENP---VWIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + + G +++ P E
Sbjct: 513 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP---ESIN 565
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 566 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 605
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 606 --ENGER---LPMPPNCPPTL 621
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 22 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 79 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 135 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYG--- 186
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 187 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 221
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 44 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 103
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 104 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 160
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D+++ S++
Sbjct: 161 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEYYSVHNKTGA 215
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 216 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 75
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 134 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 190 ES--------KFSVASDVWSFGVVLYELFT 211
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LG+G G V + N GE VAVK + + +E ++L+ + HE+I+K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+ +VME GSL + L P ++ GL + LL + + GM +L
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLA--QLLLFAQQICEGMAYLHAQH 154
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM-YERAV 192
+HRDL N++ D + K+ DFG A+ + E + + E+ P Y
Sbjct: 155 YIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPEGHEXYRV--REDGDSPVFWYAPEC 208
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT 219
L++ F D+WS GVTLY + T
Sbjct: 209 LKE---YKFYYASDVWSFGVTLYELLT 232
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 23 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 80 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 136 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYG--- 187
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 188 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 78 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 134 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYG--- 185
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLHP 185
++HRDLKP N++ D K+ DFG AR + D F++ Y T Y P
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXD----LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ + K + ++D+WS+G L + + N P P
Sbjct: 197 EIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 229
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 18 LGKGATGAVFQGV---NKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
+G+G G V QG+ +N VA+KT + + ++E +++ H +IVKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E I+MELCT G L + L + L +L L+ + +L R
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG--TEEYLHPDMYERAV 192
VHRD+ N++ + KL DFG +R +E+ + G +++ P E
Sbjct: 133 VHRDIAARNVLV----SSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP---ESIN 185
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
R+ F + D+W GV ++ + + +P+ G +N + + I
Sbjct: 186 FRR-----FTSASDVWMFGVCMWEILMHGV--KPFQGVKNNDVIGRI------------- 225
Query: 253 TSENGEIDWCTDLPNNCQLSL 273
ENGE +P NC +L
Sbjct: 226 --ENGER---LPMPPNCPPTL 241
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L +HENI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 198 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 231
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 30/224 (13%)
Query: 12 WCTTSVLGKGATGA-VFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKV-KH 67
+C VLG GA G V++G+ N VAVK + P RE ++L++ +H
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRD--VAVK------RILPECFSFADREVQLLRESDEH 77
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY-GLQEEEFLLVLEHLTAGM 126
N+++ E++++ + I +ELC +L ++ + + GL E + +L+ T+G+
Sbjct: 78 PNVIRYFCTEKDRQF--QYIAIELC-AATLQEYVEQKDFAHLGL---EPITLLQQTTSGL 131
Query: 127 KHLRDNRLVHRDLKPGNIMKFICD-DGSTIYKLTDFGAARELEEDQQFMS----LYGTEE 181
HL +VHRDLKP NI+ + + G ++DFG ++L + S + GTE
Sbjct: 132 AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
++ P+M P TVD++S G Y+V + G+ PF
Sbjct: 192 WIAPEMLSEDCKENPT-----YTVDIFSAGCVFYYVISEGSHPF 230
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ FG AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILGFGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 76
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 135 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 191 ES--------KFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 74
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 133 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 189 ES--------KFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 80
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 139 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 195 ES--------KFSVASDVWSFGVVLYELFT 216
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 140
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLHP 185
++HRDLKP N++ D K+ DFG AR + D F++ Y T Y P
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXD----LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ + K + ++D+WS+G L + + N P P
Sbjct: 197 EIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA++ + H +RE ++L + +HENI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 200 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 233
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 81
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 140 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 196 ES--------KFSVASDVWSFGVVLYELFT 217
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 24 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 84 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 140
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK L + VHRDL N M D+ T+ K+ DFG AR++ D++F S++
Sbjct: 141 AKGMKFLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEFDSVHNKTGA 195
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 196 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 21 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 78 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 134 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYG--- 185
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+TG V +++G+ VAVK + R ++ E +++ +HEN+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHENVVEMY--N 138
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
G +VME GG+L +I+ + EE+ V + + L ++HR
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFG-AARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
D+K +I+ + DG KL+DFG A+ +E + L GT ++ P++ R
Sbjct: 195 DIKSDSIL--LTHDGRV--KLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL----- 245
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD+WS+G+ + + G P+
Sbjct: 246 ---PYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 79
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL L ++ + + L + GM++L R
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 138 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 194 ES--------KFSVASDVWSFGVVLYELFT 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLHP 185
++HRDLKP N++ D K+ DFG AR + D F++ Y T Y P
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXD----LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ + K + ++D+WS+G L + + N P P
Sbjct: 201 EIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 233
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 79
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 138 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 194 ES--------KFSVASDVWSFGVVLYELFT 215
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 17 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 74 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
+L+ NI+ + D S K+ DFG AR L ED ++ + G + ++ P+
Sbjct: 130 NLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYG--- 181
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 182 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 76
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 135 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 191 ES--------KFSVASDVWSFGVVLYELFT 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 29/213 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFE--VLKKVKHENIVKLLA 75
LG G+ G V +++NG A+K + +R V+ E +L V H I+++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKHLRD 131
Q+ + ++M+ GG LF++L P E L LE+L H +D
Sbjct: 74 TF--QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL-----HSKD 126
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
+++RDLKP NI+ D I K+TDFG A+ + + L GT +Y+ P++
Sbjct: 127 --IIYRDLKPENIL---LDKNGHI-KITDFGFAKYVPDVT--YXLCGTPDYIAPEV---- 174
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
V KP K+ +D WS G+ +Y + G PF
Sbjct: 175 VSTKPYNKS----IDWWSFGILIYEMLAGYTPF 203
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 107
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 166 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 222 ES--------KFSVASDVWSFGVVLYELFT 243
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 29 LGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 86 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 142 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYG--- 193
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 194 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 228
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 83
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 142 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 198 ES--------KFSVASDVWSFGVVLYELFT 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ D G AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDAGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 79
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L + + + L + GM++L R
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 138 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 194 ES--------KFSVASDVWSFGVVLYELFT 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 27 LGAGQFGEVWMGYY-NGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 84 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 140 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYG--- 191
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 192 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 226
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLL 74
LG+G+ G V + G+ VA+K N+ + D+Q R E L+ ++H +I+KL
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + ++ ++I++ G LF+ + + + E+E + + + +++ +++
Sbjct: 80 DVIKSKD---EIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKI 133
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLKP N++ D+ + K+ DFG + + + + G+ Y P++
Sbjct: 134 VHRDLKPENLL---LDEHLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS----- 184
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS GV LY + LPF
Sbjct: 185 ---GKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ G N VAVK+ Q S M P D + E ++K+++H+ +V+L A+
Sbjct: 30 LGAGQFGEVWMGY-YNGHTKVAVKSLKQGS-MSP-DAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ I+ E GSL + L P L + L + + GM + + +HR
Sbjct: 87 TQEP---IYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL+ NI+ + D S K+ DFG AR L ED + + G + ++ P+
Sbjct: 143 DLRAANIL--VSDTLSC--KIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYG--- 194
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
TF D+WS G+ L + T G + PY G N E +
Sbjct: 195 -----TFTIKSDVWSFGILLTEIVTHGRI---PYPGMTNPEVI 229
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 82
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 141 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 197 ES--------KFSVASDVWSFGVVLYELFT 218
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 34/227 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREF----EVLKKVKHENIVKL 73
LG G G V+ G NN VAVKT ++P + ++ F ++K ++H+ +V+L
Sbjct: 20 LGAGQFGEVWMGYY-NNSTKVAVKT------LKPGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A+ ++E I+ E GSL + L E L + + + GM ++
Sbjct: 73 YAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPK-LIDFSAQIAEGMAYIERKN 129
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+HRDL+ N++ S + K+ DFG AR + ED ++ + G + P +
Sbjct: 130 YIHRDLRAANVLV----SESLMCKIADFGLARVI-EDNEYTAREGAK---FPIKW----- 176
Query: 194 RKPVGKTFGATV---DLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
P FG ++WS G+ LY + T G + PY GR N + M
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKI---PYPGRTNADVM 220
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 142
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK L + VHRDL N M D+ T+ K+ DFG AR++ D++F S++
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEFDSVHNKTGA 197
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 198 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLL 74
LG+G+ G V + G+ VA+K N+ + D+Q R E L+ ++H +I+KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + ++ ++I++ G LF+ + + + E+E + + + +++ +++
Sbjct: 81 DVIKSKD---EIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKI 134
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLKP N++ D+ + K+ DFG + + + + G+ Y P++
Sbjct: 135 VHRDLKPENLL---LDEHLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS----- 185
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS GV LY + LPF
Sbjct: 186 ---GKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLL 74
+G+G G V++G N VAVK + + +++ + E +V+ K +HEN+V+LL
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+G +V GSL + L + T L + + G+ L +N
Sbjct: 91 GFS--SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYERA 191
+HRD+K NI+ D + K++DFG AR E+ Q + + GT Y+ P+
Sbjct: 149 IHRDIKSANILL----DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE 204
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ K D++S GV L + TG LP
Sbjct: 205 ITPKS---------DIYSFGVVLLEIITG-LP 226
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLL 74
LG+G+ G V + G+ VA+K N+ + D+Q R E L+ ++H +I+KL
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + ++ ++I++ G LF+ + + + E+E + + + +++ +++
Sbjct: 71 DVIKSKD---EIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKI 124
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLKP N++ D+ + K+ DFG + + + + G+ Y P++
Sbjct: 125 VHRDLKPENLL---LDEHLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS----- 175
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS GV LY + LPF
Sbjct: 176 ---GKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQMLVGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + +T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDATL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+GV + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE----- 68
+ VLG G G V + ++ G+ A+K R ++V H
Sbjct: 14 SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR------------QEVDHHWQASG 61
Query: 69 --NIVKLLAIEEEQE--GRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+IV +L + E R +I+ME GG LF+ + + E E ++ +
Sbjct: 62 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQE-RGDQAFTEREAAEIMRDIGT 120
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ----FMSLYGTE 180
++ L + + HRD+KP N++ + + + KLTDFG A+E ++ + Y
Sbjct: 121 AIQFLHSHNIAHRDVKPENLL-YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAP 179
Query: 181 EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
E L P+ Y++ + D+WS+GV +Y + G PF
Sbjct: 180 EVLGPEKYDK-------------SCDMWSLGVIMYILLCGFPPF 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 22/238 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ---MREFEVLKKVKHENIVKLL 74
LGKG G V+ K + VA+K + S + V+ RE E+ + H NI++L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFK-SQIEKEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ R +++E G L+ L + + E+ ++E L + + ++
Sbjct: 90 NYFYDR--RRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
+HRD+KP N++ K+ DFG + ++ ++ GT +YL P+M E
Sbjct: 145 IHRDIKPENLLL----GLKGELKIADFGWSVHAPSLRR-KTMCGTLDYLPPEMIE----- 194
Query: 195 KPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGTQ 252
G+ VDLW IGV Y + GN PF + + K + V +G Q
Sbjct: 195 ---GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQ 249
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ D G AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDRGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 94
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L ++ + + L + GM++L R
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--KHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 153 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 209 ES--------KFSVASDVWSFGVVLYELFT 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLL 74
+G+G G V++G N VAVK + + +++ + E +V+ K +HEN+V+LL
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+G +V GSL + L + T L + + G+ L +N
Sbjct: 97 GFS--SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYERA 191
+HRD+K NI+ D + K++DFG AR E+ Q + + GT Y+ P+
Sbjct: 155 IHRDIKSANILL----DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE 210
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ K D++S GV L + TG LP
Sbjct: 211 ITPKS---------DIYSFGVVLLEIITG-LP 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFE----VLKKVKHENIVKL 73
+G G+ G V++G K +G+ VAVK L + P Q + F VL+K +H NI+
Sbjct: 44 IGSGSFGTVYKG--KWHGD-VAVKI---LKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF 97
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + IV + C G SL+ L E + Q + + + GM +L
Sbjct: 98 MGYMTKDN---LAIVTQWCEGSSLYKHLHVQETKF--QMFQLIDIARQTAQGMDYLHAKN 152
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAA---RELEEDQQFMSLYGTEEYLHPDMYER 190
++HRD+K NI +G T+ K+ DFG A QQ G+ ++ P+
Sbjct: 153 IIHRDMKSNNI---FLHEGLTV-KIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE---- 204
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
V+R F D++S G+ LY + TG LP+
Sbjct: 205 -VIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 31 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 90
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 91 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 147
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK L + VHRDL N M D+ T+ K+ DFG AR++ D++F S++
Sbjct: 148 AKGMKFLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEFDSVHNKTGA 202
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 203 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 18 LGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
LGKG G+V + + N GE VAVK + D + RE E+LK ++H+NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE-REIEILKSLQHDNIVKY 94
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ME GSL + L + + + L + GM++L R
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKR 152
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDMYE 189
+HRDL NI+ + K+ DFG + L +D++ + E + P+
Sbjct: 153 YIHRDLATRNILV----ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
+ F D+WS GV LY + T
Sbjct: 209 ES--------KFSVASDVWSFGVVLYELFT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 27 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 87 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 143
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK L + VHRDL N M D+ T+ K+ DFG AR++ D++F S++
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEFDSVHNKTGA 198
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 199 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L +HENI+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 142
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLHP 185
++HRDLKP N++ D K+ DFG AR + D F++ Y T Y P
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSD----LKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ + K + ++D+WS+G L + + N P P
Sbjct: 199 EIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 231
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 26 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 142
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK L + VHRDL N M D+ T+ K+ DFG AR++ D++F S++
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEFDSVHNKTGA 197
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 198 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKH-ENIVKLLA 75
++G G G V++G + G+ A+K + Q E +LKK H NI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ--EINMLKKYSHHRNIATYYG 88
Query: 76 --IEEEQEGRGK--VIVMELCTGGSLFNILDDPENTYG--LQEEEFLLVLEHLTAGMKHL 129
I++ G +VME C GS+ +++ +NT G L+EE + + G+ HL
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---KNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMY 188
++++HRD+K N++ + ++ KL DFG + +L+ + + GT ++ P++
Sbjct: 146 HQHKVIHRDIKGQNVL--LTENAEV--KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
A P T+ DLWS+G+T +A G P
Sbjct: 202 --ACDENP-DATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLL 74
+G+G G V++G N VAVK + + +++ + E +V+ K +HEN+V+LL
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+G +V GSL + L + T L + + G+ L +N
Sbjct: 97 GFS--SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYERA 191
+HRD+K NI+ D + K++DFG AR E+ Q + + GT Y+ P+
Sbjct: 155 IHRDIKSANILL----DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE 210
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ K D++S GV L + TG LP
Sbjct: 211 ITPKS---------DIYSFGVVLLEIITG-LP 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLL 74
LG+G+ G V + G+ VA+K N+ + D+Q R E L+ ++H +I+KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + ++ ++I++ G LF+ + + + E+E + + + +++ +++
Sbjct: 75 DVIKSKD---EIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRHKI 128
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLR 194
VHRDLKP N++ D K+ DFG + + + + G+ Y P++
Sbjct: 129 VHRDLKPENLLL----DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVIS----- 179
Query: 195 KPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
GK + G VD+WS GV LY + LPF
Sbjct: 180 ---GKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM------REFEVLKKVKHENI 70
++G G G V++ G+ VAVK H D+ +E ++ +KH NI
Sbjct: 14 IIGIGGFGKVYRAFWI--GDEVAVKAAR---HDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLV--LEHLTAGMKH 128
+ L + ++ +VME GG L +L G + +LV + GM +
Sbjct: 69 IALRGVCLKEPNL--CLVMEFARGGPLNRVLS------GKRIPPDILVNWAVQIARGMNY 120
Query: 129 LRDNRLV---HRDLKPGNIMKFI----CDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE 181
L D +V HRDLK NI+ D + I K+TDFG ARE + MS G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-MSAAGAYA 179
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
++ P+ V+R F D+WS GV L+ + TG +PFR G
Sbjct: 180 WMAPE-----VIR---ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG 219
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 85 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 144
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 145 KDFSHPNVLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 201
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK L + VHRDL N M D+ T+ K+ DFG AR++ D++F S++
Sbjct: 202 AKGMKFLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEFDSVHNKTGA 256
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 257 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 27 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 87 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 143
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK L + VHRDL N M D+ T+ K+ DFG AR++ D++F S++
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-LDKEFDSVHNKTGA 198
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 199 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L L + L + G+K++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KCQHLSNDHICYFLYQILRGLKYI 144
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLY-GTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D F++ Y T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 200 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 233
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 32/289 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
S +G GA G+V + G VAVK F + H + RE +LK +KHEN++
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMKHENVI 84
Query: 72 KLLAI---EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
LL + E V ++ G L NI+ L ++ ++ + G+K+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRGLKY 140
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ + +D K+ D G AR D + T Y P++
Sbjct: 141 IHSADIIHRDLKPSNLA--VNEDCEL--KILDGGLAR--HTDDEMTGYVATRWYRAPEIM 194
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN--KETMYYITTKKASG 246
+ + TVD+WS+G + + TG F P + K + + T A
Sbjct: 195 LNWM-------HYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVGTPGAEL 246
Query: 247 VISGTQTSENGEIDWCTDLP--NNCQLSLGLKKLVTPILAGLLEVDSKK 293
+ + S I T +P N + +G L +L +L +DS K
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 295
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 37/221 (16%)
Query: 17 VLGKGATGAVFQGVNKNN-GEP--VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
+LG+G G V++GV N+ GE VAVKT + + + M E ++K + H +IVKL
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ I EE+ I+MEL G L + L+ +N+ L+ +L + M +L
Sbjct: 75 IGIIEEEP---TWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESIN 129
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
VHRD+ NI+ KL DFG +R +E++ D Y+ +V
Sbjct: 130 CVHRDIAVRNILV----ASPECVKLGDFGLSRYIEDE---------------DYYKASVT 170
Query: 194 RKPVG---------KTFGATVDLWSIGVTLYHVAT-GNLPF 224
R P+ + F D+W V ++ + + G PF
Sbjct: 171 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKH------ 67
+ VLG G G V + ++ G+ A+K R ++V H
Sbjct: 33 SKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR------------QEVDHHWQASG 80
Query: 68 -ENIVKLLAIEEEQE--GRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA 124
+IV +L + E R +I+ME GG LF+ + + E E ++ +
Sbjct: 81 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQE-RGDQAFTEREAAEIMRDIGT 139
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ----FMSLYGTE 180
++ L + + HRD+KP N++ + + + KLTDFG A+E ++ + Y
Sbjct: 140 AIQFLHSHNIAHRDVKPENLL-YTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAP 198
Query: 181 EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
E L P+ Y++ + D+WS+GV +Y + G PF
Sbjct: 199 EVLGPEKYDK-------------SCDMWSLGVIMYILLCGFPPF 229
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G V++G+NK G VA+K S +RE ++K++KHENIV+L +
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDD---PENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ K+ ++ L +D GL+ L G+ +N++
Sbjct: 73 HTEN---KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI 129
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVL 193
+HRDLKP N++ I G KL DFG AR F S T Y PD+ +
Sbjct: 130 LHRDLKPQNLL--INKRGQ--LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS-- 183
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
+T+ ++D+WS G L + TG P P
Sbjct: 184 -----RTYSTSIDIWSCGCILAEMITGK-PLFP 210
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 13/224 (5%)
Query: 6 GSTNYVWCTTSVLGKGATGAVFQG-VNKNNGEPV--AVKTFNQLSHMRPHDVQMREFEVL 62
G ++ + V+G+G G V+ G + N+G+ + AVK+ N+++ + + E ++
Sbjct: 25 GPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 63 KKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL 122
K H N++ LL I EG ++V+ G L N + + T+ ++ + +
Sbjct: 85 KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQV 141
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GMK+L + VHRDL N M D+ T+ K+ DFG AR++ D++ S++
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCM---LDEKFTV-KVADFGLARDM-YDKEXXSVHNKTGA 196
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P + L + F D+WS GV L+ + T P P
Sbjct: 197 KLPVKW--MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ +GE PVA+K + + + + + E V+ V + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
LL I + +V +L G L + + EN L ++ L + GM +L D
Sbjct: 84 LLGICLTSTVQ---LVTQLMPYGCLLDHVR--ENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
RLVHRDL N++ K+TDFG AR L+ D+ G + + M ++
Sbjct: 139 RLVHRDLAARNVLV----KSPNHVKITDFGLARLLDIDETEYHADGGKVPIK-WMALESI 193
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
LR + F D+WS GVT++ + T +PY G +E
Sbjct: 194 LR----RRFTHQSDVWSYGVTVWELMT--FGAKPYDGIPARE 229
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDV-QMREFEVLKKVKHENIVKLLAI 76
+G+G G VF+ ++ G+ VA+K + + +RE ++L+ +KHEN+V L+ I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 77 EEEQEG-----RGKV-IVMELCT---GGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
+ +G + +V + C G L N+L E V++ L G+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGLY 139
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
++ N+++HRD+K N++ I DG + KL DFG AR + + P+
Sbjct: 140 YIHRNKILHRDMKAANVL--ITRDG--VLKLADFGLARA----------FSLAKNSQPNR 185
Query: 188 YERAVL----RKP---VG-KTFGATVDLWSIGVTLYHVAT 219
Y V+ R P +G + +G +DLW G + + T
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + VME GG LF L E + EE + + +++L +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR-ERVF--TEERARFYGAEIVSALEYLHSRDV 126
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
V+RD+K N+M + DG K+TDFG +E D M + GT EYL P++ E
Sbjct: 127 VYRDIKLENLM--LDKDGHI--KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE---- 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W +GV +Y + G LPF
Sbjct: 179 ----DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + VME GG LF L E + EE + + +++L +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR-ERVF--TEERARFYGAEIVSALEYLHSRDV 126
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
V+RD+K N+M + DG K+TDFG +E D M + GT EYL P++ E
Sbjct: 127 VYRDIKLENLM--LDKDGHI--KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE---- 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W +GV +Y + G LPF
Sbjct: 179 ----DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQMLVGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + +T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDATL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+GV + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + VME GG LF L E + EE + + +++L +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR-ERVF--TEERARFYGAEIVSALEYLHSRDV 126
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
V+RD+K N+M + DG K+TDFG +E D M + GT EYL P++ E
Sbjct: 127 VYRDIKLENLM--LDKDGHI--KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE---- 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W +GV +Y + G LPF
Sbjct: 179 ----DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 37/221 (16%)
Query: 17 VLGKGATGAVFQGVNKNN-GEP--VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
+LG+G G V++GV N+ GE VAVKT + + + M E ++K + H +IVKL
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ I EE+ I+MEL G L + L+ +N+ L+ +L + M +L
Sbjct: 91 IGIIEEEP---TWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESIN 145
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
VHRD+ NI+ KL DFG +R +E++ D Y+ +V
Sbjct: 146 CVHRDIAVRNILV----ASPECVKLGDFGLSRYIEDE---------------DYYKASVT 186
Query: 194 RKPVG---------KTFGATVDLWSIGVTLYHVAT-GNLPF 224
R P+ + F D+W V ++ + + G PF
Sbjct: 187 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + VME GG LF L E + EE + + +++L +
Sbjct: 75 YAFQTHDRL--CFVMEYANGGELFFHLSR-ERVF--TEERARFYGAEIVSALEYLHSRDV 129
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
V+RD+K N+M + DG K+TDFG +E D M + GT EYL P++ E
Sbjct: 130 VYRDIKLENLM--LDKDGHI--KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE---- 181
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W +GV +Y + G LPF
Sbjct: 182 ----DNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR GT + P++ R
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTA----------GTSFMMEPEVVTR-Y 190
Query: 193 LRKP---VGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
R P +G + VDLWS+G + + + P R Y + NK
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 37/221 (16%)
Query: 17 VLGKGATGAVFQGVNKNN-GEP--VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
+LG+G G V++GV N+ GE VAVKT + + + M E ++K + H +IVKL
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ I EE+ I+MEL G L + L+ +N+ L+ +L + M +L
Sbjct: 79 IGIIEEEP---TWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLESIN 133
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
VHRD+ NI+ KL DFG +R +E++ D Y+ +V
Sbjct: 134 CVHRDIAVRNILV----ASPECVKLGDFGLSRYIEDE---------------DYYKASVT 174
Query: 194 RKPVG---------KTFGATVDLWSIGVTLYHVAT-GNLPF 224
R P+ + F D+W V ++ + + G PF
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEP--VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LG G G+V QGV + + VA+K Q + + MRE +++ ++ + IV+L+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEE----EFLLVLEHLTAGMKHLRD 131
+ + + ++VME+ GG L L G +EE +L ++ GMK+L +
Sbjct: 78 VCQAE---ALMLVMEMAGGGPLHKFL------VGKREEIPVSNVAELLHQVSMGMKYLEE 128
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY-LHPDMYER 190
VHRDL N++ K++DFG ++ L D + + ++ L E
Sbjct: 129 KNFVHRDLAARNVLLV----NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 184
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
RK F + D+WS GVT++ + +PY + E M +I K
Sbjct: 185 INFRK-----FSSRSDVWSYGVTMWEALSYGQ--KPYKKMKGPEVMAFIEQGK 230
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 144
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ----FMSLYGTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 200 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ S +G+GA G V + N VA+K + H +RE ++L + +HENI+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 72 KLLAIEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ I E V +++ L+ +L T L + L + G+K++
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL----KTQHLSNDHICYFLYQILRGLKYI 145
Query: 130 RDNRLVHRDLKPGN-IMKFICDDGSTIYKLTDFGAARELEEDQQ----FMSLYGTEEYLH 184
++HRDLKP N ++ CD K+ DFG AR + D T Y
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCD-----LKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
P++ + K + ++D+WS+G L + + N P P
Sbjct: 201 PEIMLNS-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 234
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 59/274 (21%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQ--LSHMRPHDVQMREFEV--LKKVKHENIV 71
+G+G+ G V + A+K N+ + + P DV+ + EV +KK+ H NI
Sbjct: 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFN----ILDD-----------------PE----- 105
+L + E+++ +VMELC GG L + +DD PE
Sbjct: 92 RLYEVYEDEQY--ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 106 ---NTYGLQE------EEFLL--VLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGST 154
+ +G +E E L+ ++ + + + +L + + HRD+KP N + + S
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL--FSTNKSF 207
Query: 155 IYKLTDFGAAREL-----EEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWS 209
KL DFG ++E E + GT ++ P++ +++G D WS
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT------NESYGPKCDAWS 261
Query: 210 IGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
GV L+ + G +PF G + +T+ + KK
Sbjct: 262 AGVLLHLLLMGAVPFP---GVNDADTISQVLNKK 292
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDV-QMREFEVLKKVKHENIVKLLAI 76
+G+G G VF+ ++ G+ VA+K + + +RE ++L+ +KHEN+V L+ I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 77 EEEQEG-----RGKV-IVMELCT---GGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
+ +G + +V + C G L N+L E V++ L G+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGLY 138
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
++ N+++HRD+K N++ I DG + KL DFG AR + + P+
Sbjct: 139 YIHRNKILHRDMKAANVL--ITRDG--VLKLADFGLARA----------FSLAKNSQPNR 184
Query: 188 YERAVL----RKP---VG-KTFGATVDLWSIGVTLYHVAT 219
Y V+ R P +G + +G +DLW G + + T
Sbjct: 185 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + VME GG LF L E + EE + + +++L +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR-ERVF--TEERARFYGAEIVSALEYLHSRDV 126
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
V+RD+K N+M + DG K+TDFG +E D M + GT EYL P++ E
Sbjct: 127 VYRDIKLENLM--LDKDGHI--KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE---- 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W +GV +Y + G LPF
Sbjct: 179 ----DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKL- 73
V+G+GA G V KN + A+K N+ ++ + E +VL + I L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A Q+ +VM+ GG L +L E+ L EE L + + +
Sbjct: 141 YAF---QDDNNLYLVMDYYVGGDLLTLLSKFEDR--LPEEMARFYLAEMVIAIDSVHQLH 195
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS--LYGTEEYLHPDMYERA 191
VHRD+KP NI+ D + +L DFG+ +L ED S GT +Y+ P++ +
Sbjct: 196 YVHRDIKPDNILM----DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ-- 249
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G+ +G D WS+GV +Y + G PF
Sbjct: 250 AMEGGKGR-YGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKV--IVMELCTGGSLFNILDDPENTYG-LQEE 113
RE + + H IV + A E + G + IVME G +L +I+ +T G + +
Sbjct: 61 REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV----HTEGPMTPK 116
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--- 170
+ V+ + N ++HRD+KP NIM + K+ DFG AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSGNS 172
Query: 171 -QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Q ++ GT +YL P+ G + A D++S+G LY V TG PF
Sbjct: 173 VTQTAAVIGTAQYLSPEQAR--------GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
V+G+GA G V +K+ + A+K ++ ++ D E +++ +V+L
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNIL---DDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
Q+ R +VME GG L N++ D PE E +L L+ + +
Sbjct: 136 YAF--QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHS------- 186
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM--SLYGTEEYLHPDMYE 189
+HRD+KP N++ D S KL DFG ++ ++ + GT +Y+ P+
Sbjct: 187 MGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE--- 239
Query: 190 RAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
VL+ G + G D WS+GV LY + G+ PF
Sbjct: 240 --VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
V+G+GA G V +K+ + A+K ++ ++ D E +++ +V+L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNIL---DDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
Q+ R +VME GG L N++ D PE E +L L+ + +
Sbjct: 141 Y--AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHS------- 191
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM--SLYGTEEYLHPDMYE 189
+HRD+KP N++ D S KL DFG ++ ++ + GT +Y+ P+
Sbjct: 192 MGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE--- 244
Query: 190 RAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
VL+ G + G D WS+GV LY + G+ PF
Sbjct: 245 --VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + VME GG LF L E + EE + + +++L +
Sbjct: 72 YAFQTHDRL--CFVMEYANGGELFFHLSR-ERVF--TEERARFYGAEIVSALEYLHSRDV 126
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
V+RD+K N+M + DG K+TDFG +E D M + GT EYL P++ E
Sbjct: 127 VYRDIKLENLM--LDKDGHI--KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE---- 178
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W +GV +Y + G LPF
Sbjct: 179 ----DNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIV 71
V+G+GA G V +K+ + A+K ++ ++ D E +++ +V
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNIL---DDPENTYGLQEEEFLLVLEHLTAGMKH 128
+L Q+ R +VME GG L N++ D PE E +L L+ + +
Sbjct: 138 QLFY--AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHS---- 191
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM--SLYGTEEYLHPD 186
+HRD+KP N++ D S KL DFG ++ ++ + GT +Y+ P+
Sbjct: 192 ---MGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
Query: 187 MYERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
VL+ G + G D WS+GV LY + G+ PF
Sbjct: 245 -----VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDV-QMREFEVLKKVKHENIVKLLAI 76
+G+G G VF+ ++ G+ VA+K + + +RE ++L+ +KHEN+V L+ I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 77 EEEQEG-----RGKV-IVMELCT---GGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
+ +G + +V + C G L N+L E V++ L G+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGLY 139
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
++ N+++HRD+K N++ I DG + KL DFG AR + + P+
Sbjct: 140 YIHRNKILHRDMKAANVL--ITRDG--VLKLADFGLARA----------FSLAKNSQPNR 185
Query: 188 YERAVL----RKP---VG-KTFGATVDLWSIGVTLYHVAT 219
Y V+ R P +G + +G +DLW G + + T
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ + VME GG LF L E + EE + + +++L +
Sbjct: 77 YAFQTHDRL--CFVMEYANGGELFFHLSR-ERVF--TEERARFYGAEIVSALEYLHSRDV 131
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
V+RD+K N+M + DG K+TDFG +E D M + GT EYL P++ E
Sbjct: 132 VYRDIKLENLM--LDKDGHI--KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE---- 183
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W +GV +Y + G LPF
Sbjct: 184 ----DNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM------REFEVLKKVKHENIV 71
+G GA GAV V+ G VA+K RP ++ RE +LK ++HEN++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKL-----YRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 72 KLLAIEEEQEGRGKV----IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
LL + E +VM G L ++ + L E+ ++ + G++
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK----LGEDRIQFLVYQMLKGLR 142
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
++ ++HRDLKPGN+ + +D K+ DFG AR + D + T Y P++
Sbjct: 143 YIHAAGIIHRDLKPGNLA--VNEDCEL--KILDFGLAR--QADSEMXGXVVTRWYRAPEV 196
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ + TVD+WS+G + + TG F+
Sbjct: 197 ILNWM-------RYTQTVDIWSVGCIMAEMITGKTLFK 227
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 37/233 (15%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ---MREFEVLKKVKHENIVKLL 74
+G+G G VF G + + VAVK+ + P D++ ++E +LK+ H NIV+L+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRE---TLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG--LQEEEFLLVLEHLTAGMKHLRDN 132
+ +++ IVMEL GG L T G L+ + L ++ AGM++L
Sbjct: 179 GVCTQKQ--PIYIVMELVQGGDFLTFL----RTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDM- 187
+HRDL N + + K++DFG +RE E D + + G + + P+
Sbjct: 233 CCIHRDLAARNCLV----TEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEAL 287
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
Y R + + D+WS G+ L+ T +L PY N++T ++
Sbjct: 288 NYGR----------YSSESDVWSFGILLWE--TFSLGASPYPNLSNQQTREFV 328
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 76
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + V+ + L +LD PE Y + + ++ L L +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 186 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 101/231 (43%), Gaps = 37/231 (16%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVL-KKVKHENIVKL 73
V+GKG+ G V +K AVK + + ++ + + M E VL K VKH +V L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL------VLEHLTAGMK 127
Q V++ GG LF Y LQ E L + + +
Sbjct: 105 HF--SFQTADKLYFVLDYINGGELF---------YHLQRERCFLEPRARFYAAEIASALG 153
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPD 186
+L +V+RDLKP NI+ + G + LTDFG +E +E + + GT EYL P+
Sbjct: 154 YLHSLNIVYRDLKPENIL--LDSQGHIV--LTDFGLCKENIEHNSTTSTFCGTPEYLAPE 209
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMY 237
VL K + + TVD W +G LY + G PF RN MY
Sbjct: 210 -----VLHK---QPYDRTVDWWCLGAVLYEMLYGLPPFY----SRNTAEMY 248
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR GT + P++ R
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTA----------GTSFMMEPEVVTR-Y 190
Query: 193 LRKP---VGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
R P +G + VD+WS+G + + + P R Y + NK
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR GT + P++ R
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTA----------GTSFMMTPEVVTR-Y 190
Query: 193 LRKP---VGKTFGATVDLWSIGVTLYHVATGNLPF 224
R P +G + VD+WS+G + + G + F
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDV-QMREFEVLKKVKHENIVKLLAI 76
+G+G G VF+ ++ G+ VA+K + + +RE ++L+ +KHEN+V L+ I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 77 ---EEEQEGRGKV---IVMELCT---GGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
+ R K +V + C G L N+L E V++ L G+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGLY 139
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
++ N+++HRD+K N++ I DG + KL DFG AR + + P+
Sbjct: 140 YIHRNKILHRDMKAANVL--ITRDG--VLKLADFGLARA----------FSLAKNSQPNR 185
Query: 188 YERAVL----RKP---VG-KTFGATVDLWSIGVTLYHVAT 219
Y V+ R P +G + +G +DLW G + + T
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G +K E VAVK + + + +VQ RE + ++H NIV+ +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQ-REIINHRSLRHPNIVRFKEVI 85
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
I+ME +GG L+ + N E+E + L +G+ + ++ HR
Sbjct: 86 LTPTHLA--IIMEYASGGELYERIC---NAGRFSEDEARFFFQQLLSGVSYCHSMQICHR 140
Query: 138 DLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
DLK N + DGS K+ DFG ++ Q S GT Y+ P++ +LR+
Sbjct: 141 DLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV----LLRQ 192
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFR-PYGGRRNKETMYYITTKKAS 245
+ G D+WS GVTLY + G PF P R ++T+ I + K S
Sbjct: 193 ---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ KN+ +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + +++
Sbjct: 76 YF--HDSTRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKKVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-AALCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENI 70
+ +G G+ + V+K AVK ++ S P + E E+L + +H NI
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-SKRDPSE----EIEILLRYGQHPNI 83
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
+ L + ++ G+ +V EL GG L LD E E VL + +++L
Sbjct: 84 ITLKDVYDD--GKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYE 189
+VHRDLKP NI+ ++ DFG A++L E+ M+ T ++ P++ +
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
R + + D+WS+G+ LY + G PF
Sbjct: 199 R--------QGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ +G G+ + V+K AVK ++ ++++ +L+ +H NI+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYGQHPNII 84
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
L + ++ G+ +V EL GG L LD E E VL + +++L
Sbjct: 85 TLKDVYDD--GKHVYLVTELMRGGEL---LDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYER 190
+VHRDLKP NI+ ++ DFG A++L E+ M+ T ++ P++ +R
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKR 199
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + D+WS+G+ LY + G PF
Sbjct: 200 --------QGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 94 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 147
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR + T Y P++
Sbjct: 148 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMVPFVVTRYYRAPEVI---- 199
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 200 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKL 73
++LGKG+ V++ + + G VA+K ++ + + VQ E ++ ++KH +I++L
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E+ +V+E+C G + L + + E E + + GM +L +
Sbjct: 77 YNYFEDSN--YVYLVLEMCHNGEMNRYLKNRVKPF--SENEARHFMHQIITGMLYLHSHG 132
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAV 192
++HRDL N++ + K+ DFG A +L+ ++ +L GT Y+ P++ R+
Sbjct: 133 ILHRDLTLSNLLL----TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS- 187
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G D+WS+G Y + G PF
Sbjct: 188 -------AHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 24/221 (10%)
Query: 13 CTT--SVLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKH 67
C T V+G G G V G K G+ PVA+KT + + E ++ + H
Sbjct: 23 CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 82
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
NI+ L + + + +IV E GSL L + + + + + +L ++AGMK
Sbjct: 83 PNIIHLEGVVTKS--KPVMIVTEYMENGSLDTFLKKNDGQFTVIQ--LVGMLRGISAGMK 138
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
+L D VHRDL NI+ + + + K++DFG +R LE+D + + Y T P
Sbjct: 139 YLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIR 192
Query: 188 Y---ERAVLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+ E RK F + D+WS G+ ++ V + G P+
Sbjct: 193 WTAPEAIAFRK-----FTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 79 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 134 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 183 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 29/250 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S+LG+GA G V +K GE VA+K +RE ++LK KHENI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 76 IEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
I+ E +V +++ L ++ +T L ++ + +K L +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVI----STQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 134 LVHRDLKPGNIM-KFICDDGSTIYKLTDFGAARELEEDQQFMS-----LYGTEEYLHPDM 187
++HRDLKP N++ CD K+ DFG AR ++E S G EY+
Sbjct: 133 VIHRDLKPSNLLINSNCD-----LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP-YGGRRNKETMYYITTKKASG 246
Y RA + +D+WS G L + RP + GR + + I G
Sbjct: 188 Y-RAPEVMLTSAKYSRAMDVWSCGCILAELFLR----RPIFPGRDYRHQLLLIF-----G 237
Query: 247 VISGTQTSEN 256
+I GT S+N
Sbjct: 238 II-GTPHSDN 246
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 16 SVLGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRP---HDVQMREFEVLKKVKHE 68
S LGKG G+V + + N G VAVK QL H P D Q RE ++LK + +
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVK---QLQHSGPDQQRDFQ-REIQILKALHSD 71
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
IVK + + +VME G L + L + L LL + GM++
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEY 129
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
L R VHRDL NI+ + K+ DFG A+ L D+ + Y E ++
Sbjct: 130 LGSRRCVHRDLAARNILV----ESEAHVKIADFGLAKLLPLDKDY---YVVREPGQSPIF 182
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
A F D+WS GV LY + T
Sbjct: 183 WYAP-ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 81 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 135
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 136 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 184
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 185 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 19 GKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMR---EFEVLKKVKHENIVKLLA 75
G+G G V++G N VAVK + + +++ + E +V K +HEN+V+LL
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+G +V GSL + L + T L + + G+ L +N +
Sbjct: 89 FS--SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI 146
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS---LYGTEEYLHPDMYERAV 192
HRD+K NI+ D + K++DFG AR E+ Q + + GT Y P+ +
Sbjct: 147 HRDIKSANILL----DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEI 202
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
K D++S GV L + TG LP
Sbjct: 203 TPKS---------DIYSFGVVLLEIITG-LP 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 86 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 139
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 140 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 191
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VDLWS+G + + + P R Y + NK
Sbjct: 192 ----LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 230
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G ++ L + E+ + L + + R++
Sbjct: 81 YF--HDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALSYCHSKRVI 135
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 136 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 184
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 185 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 76 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-AALCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 93 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 147
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 148 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 196
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 197 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 75 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 129
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 130 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 179 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 79 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 134 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-AALCGTLDYLPPEMIE------ 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 183 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQMLVGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + +T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDATL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 99/240 (41%), Gaps = 49/240 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G VIV E C G+L L N Y + E+ L LEHL
Sbjct: 86 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIXKD-------- 192
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 193 ------PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 244
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I++E T G+L + L + N + L + +++ M++L +HR
Sbjct: 84 TREPPF--YIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 141 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 194 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 76 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 77 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 131
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 132 HRDIKPENLL--LGSAGEL--KIADFGWSCHAPSSRR-TTLSGTLDYLPPEMIE------ 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 181 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + +T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDATL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 79 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 134 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 183 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 16 SVLGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRP---HDVQMREFEVLKKVKHE 68
S LGKG G+V + + N G VAVK QL H P D Q RE ++LK + +
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVK---QLQHSGPDQQRDFQ-REIQILKALHSD 84
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
IVK + + +VME G L + L + L LL + GM++
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEY 142
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
L R VHRDL NI+ + K+ DFG A+ L D+ + Y E ++
Sbjct: 143 LGSRRCVHRDLAARNILV----ESEAHVKIADFGLAKLLPLDKDY---YVVREPGQSPIF 195
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
A F D+WS GV LY + T
Sbjct: 196 WYAP-ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G VIV E C G+L L N Y + E+ L LEHL
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIXKD-------- 201
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 202 ------PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 253
Query: 230 RRNKE 234
+ E
Sbjct: 254 VKIDE 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G ++ L + E+ + L + + R++
Sbjct: 81 YF--HDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALSYCHSKRVI 135
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 136 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-XXLXGTLDYLPPEMIE------ 184
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 185 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 77 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 131
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 132 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TDLCGTLDYLPPEMIE------ 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 181 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 78 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 132
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 133 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-XXLCGTLDYLPPEMIE------ 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 182 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D K+TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLMI----DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 18 LGKGATGAVFQGVNKNN-----GEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+G G V + V ++ + V VK +Q+ + +E +L +H NI+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV-------LVKKEISILNIARHRNILH 65
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L E E V++ E +G +F ++ + + L E E + + + ++ L +
Sbjct: 66 LHESFESMEEL--VMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+ H D++P NI+ + STI K+ +FG AR+L+ F L+ EY P++++ V
Sbjct: 122 NIGHFDIRPENII-YQTRRSSTI-KIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ D+WS+G +Y + +G PF
Sbjct: 180 V--------STATDMWSLGTLVYVLLSGINPF 203
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 93 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 146
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 147 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 198
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 199 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 16 SVLGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRP---HDVQMREFEVLKKVKHE 68
S LGKG G+V + + N G VAVK QL H P D Q RE ++LK + +
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVK---QLQHSGPDQQRDFQ-REIQILKALHSD 72
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
IVK + + +VME G L + L + L LL + GM++
Sbjct: 73 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGMEY 130
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
L R VHRDL NI+ + K+ DFG A+ L D+ + Y E ++
Sbjct: 131 LGSRRCVHRDLAARNILV----ESEAHVKIADFGLAKLLPLDKDY---YVVREPGQSPIF 183
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
A F D+WS GV LY + T
Sbjct: 184 WYAP-ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDA-NLSQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + +T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDATL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I++E T G+L + L + N + L + +++ M++L +HR
Sbjct: 79 TREPPF--YIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 136 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 189 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 215
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 97 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 150
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 151 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 202
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VDLWS+G + + + P R Y + NK
Sbjct: 203 ----LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 241
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 36/244 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G V++G +K VA+K +RE +LK +KH NIV L I
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ + +V E L LDD N + + L L G+ + +++HR
Sbjct: 70 HTE--KSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLF--QLLRGLAYCHRQKVLHR 124
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELE-----EDQQFMSLYGTEEYLHPDMYERAV 192
DLKP N++ I + G KL DFG AR D + ++L+ Y PD+
Sbjct: 125 DLKPQNLL--INERGEL--KLADFGLARAKSIPTKTYDNEVVTLW----YRPPDIL---- 172
Query: 193 LRKPVGKT-FGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVISGT 251
+G T + +D+W +G Y +ATG P P G +E +++I I GT
Sbjct: 173 ----LGSTDYSTQIDMWGVGCIFYEMATGR-PLFP--GSTVEEQLHFIFR------ILGT 219
Query: 252 QTSE 255
T E
Sbjct: 220 PTEE 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEP--VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LG G G+V QGV + + VA+K Q + + MRE +++ ++ + IV+L+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEE----EFLLVLEHLTAGMKHLRD 131
+ + + ++VME+ GG L L G +EE +L ++ GMK+L +
Sbjct: 404 VCQAE---ALMLVMEMAGGGPLHKFL------VGKREEIPVSNVAELLHQVSMGMKYLEE 454
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY-LHPDMYER 190
VHR+L N++ K++DFG ++ L D + + ++ L E
Sbjct: 455 KNFVHRNLAARNVLLV----NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
RK F + D+WS GVT++ + +PY + E M +I K
Sbjct: 511 INFRK-----FSSRSDVWSYGVTMWEALSYGQ--KPYKKMKGPEVMAFIEQGK 556
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 102 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 156
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 157 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 205
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 206 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 76
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 77 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D F + G + + E K
Sbjct: 134 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TFTAHAGAKFPIKWTAPESLAYNK- 186
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 187 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 213
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 86 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 139
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 140 RRLVHRDLAARNVLV----KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-----KWM 190
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 76 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TDLCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 77 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 131
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 132 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-DTLCGTLDYLPPEMIE------ 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 181 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 99/238 (41%), Gaps = 47/238 (19%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL----LVLEHL----- 122
LL + G VIV E C G+L L N + + E L L LEHL
Sbjct: 97 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 123 --TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE 180
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILL----SEKNVVKICDFGLARDIXKD---------- 201
Query: 181 EYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 202 ----PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 101/244 (41%), Gaps = 48/244 (19%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF--LLVLEHLTA-- 124
LL + G VIV E C G+L L N Y E+ + L LEHL
Sbjct: 96 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 125 -----GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIXKD--------- 201
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGGR 230
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 202 -----PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGV 254
Query: 231 RNKE 234
+ E
Sbjct: 255 KIDE 258
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDXTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 84 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 137
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 138 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 188
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKTLEEFQDVYLVMEL-MDANLXQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDXTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 45/241 (18%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEF--LLVLEHLTA----- 124
LL + G VIV E C G+L L N + ++ + L LEHL
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 125 --GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILL----SEKNVVKICDFGLARDIYKD------------ 197
Query: 183 LHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGGRRNK 233
PD + R P+ T+ D+WS GV L+ + + L PY G +
Sbjct: 198 --PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID 253
Query: 234 E 234
E
Sbjct: 254 E 254
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 83 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 136
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 137 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 187
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
L + + + D+WS GVT++ + T +PY G
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT--FGSKPYDG 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 84 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 137
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 138 RRLVHRDLAARNVLV----KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-----KWM 188
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G VIV E C G+L L N Y + E+ L LEHL
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD-------- 201
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 202 ------PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 253
Query: 230 RRNKE 234
+ E
Sbjct: 254 VKIDE 258
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I++E T G+L + L + N + L + +++ M++L +HR
Sbjct: 79 TREPPF--YIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 136 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 189 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 215
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVK-HENIV 71
T+ +LG+GA V V+ NG+ AVK Q H R RE E L + + ++NI+
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSR--VFREVETLYQCQGNKNIL 74
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
+L+ E+ +V E GGS IL + E E V+ + A + L
Sbjct: 75 ELIEFFEDDTRF--YLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLHT 129
Query: 132 NRLVHRDLKPGNIMKFICDDGSTI--YKLTDF--GAARELEED------QQFMSLYGTEE 181
+ HRDLKP NI+ C+ + K+ DF G+ +L + + G+ E
Sbjct: 130 KGIAHRDLKPENIL---CESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
Y+ P++ E + + DLWS+GV LY + +G PF + G
Sbjct: 187 YMAPEVVE---VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCG 231
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 82 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 135
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 136 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 186
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 81 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 135
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 136 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TDLCGTLDYLPPEMIE------ 184
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 185 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 76 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TDLCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 86 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 139
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 140 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 190
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K +A+K QL RE E+ ++H NI++L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 73 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 127
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 128 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 176
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 177 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G VIV E C G+L L N Y + E+ L LEHL
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD-------- 201
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 202 ------PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 253
Query: 230 RRNKE 234
+ E
Sbjct: 254 VKIDE 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 76 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TELCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 130 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 183
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 184 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 235
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 236 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 85 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 138
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 139 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 189
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+ I D I ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENL---IIDQQGYI-QVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -ISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 80 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 134
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 135 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 183
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 184 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 84 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 137
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 138 RRLVHRDLAARNVLV----KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-----KWM 188
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ---MREFEVLKKVKHENIVKLL 74
+G+G G VF G + + VAVK+ + P D++ ++E +LK+ H NIV+L+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRE---TLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG--LQEEEFLLVLEHLTAGMKHLRDN 132
+ +++ IVMEL GG L T G L+ + L ++ AGM++L
Sbjct: 179 GVCTQKQ--PIYIVMELVQGGDFLTFL----RTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEE----YLHPDM- 187
+HRDL N + + K++DFG +RE E D + G + + P+
Sbjct: 233 CCIHRDLAARNCLV----TEKNVLKISDFGMSRE-EADGVXAASGGLRQVPVKWTAPEAL 287
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
Y R + + D+WS G+ L+ T +L PY N++T ++
Sbjct: 288 NYGR----------YSSESDVWSFGILLWE--TFSLGASPYPNLSNQQTREFV 328
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 79 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 134 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-XXLCGTLDYLPPEMIE------ 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 183 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + IVMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKSLEEFQDVYIVMEL-MDANLSQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + VD+WS+G + + G + F
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 83 LLGICLTSTVQ---LIMQLMPFGXLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 136
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 137 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 187
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 79
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 80 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 137 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYNK- 189
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 190 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 216
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 141 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 194 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 220
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K N +A+K +QL RE E+ ++H NI+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 76 IEEEQEGRGKVIVM-ELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ +M E G L+ L +G E+ +E L + + + +
Sbjct: 82 YFHD---RKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP N++ + G K+ DFG + ++ + GT +YL P+M E
Sbjct: 135 VIHRDIKPENLL--MGYKGEL--KIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIE---- 185
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
GKT VDLW GV Y G PF
Sbjct: 186 ----GKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 91 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 144
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 145 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 196
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 197 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKL- 73
V+G+GA G V KN A+K N+ ++ + E +VL + I L
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A ++E +VM+ GG L +L E+ L E+ + + + +
Sbjct: 157 YAFQDENH---LYLVMDYYVGGDLLTLLSKFEDK--LPEDMARFYIGEMVLAIDSIHQLH 211
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS--LYGTEEYLHPDMYERA 191
VHRD+KP N++ D + +L DFG+ ++ +D S GT +Y+ P++ +
Sbjct: 212 YVHRDIKPDNVLL----DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ-- 265
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ +GK +G D WS+GV +Y + G PF
Sbjct: 266 AMEDGMGK-YGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ + + +A+K QL RE E+ ++H NI++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 80 YF--HDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYCHSKRVI 134
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + +G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 135 HRDIKPENLL--LGSNGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 183
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 184 --GRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKL- 73
V+G+GA G V KN A+K N+ ++ + E +VL + I L
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A ++E +VM+ GG L +L E+ L E+ + + + +
Sbjct: 141 YAFQDENH---LYLVMDYYVGGDLLTLLSKFEDK--LPEDMARFYIGEMVLAIDSIHQLH 195
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS--LYGTEEYLHPDMYERA 191
VHRD+KP N++ D + +L DFG+ ++ +D S GT +Y+ P++ +
Sbjct: 196 YVHRDIKPDNVLL----DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ-- 249
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ +GK +G D WS+GV +Y + G PF
Sbjct: 250 AMEDGMGK-YGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 79 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 136 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 189 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 79 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 136 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 189 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 80
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 81 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 138 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAPAGAKFPIKWTAPESLAYNK- 190
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 191 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 93 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 146
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 147 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 198
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 199 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 76 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-XXLCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 76 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 130
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 131 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TXLCGTLDYLPPEMIE------ 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 180 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 42/246 (17%)
Query: 13 CTTSVLGKGATG-AVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK-HENI 70
+ +LG G++G VFQG + G PVAVK + D+ + E ++L + H N+
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQ--GRPVAVKRM----LIDFCDIALMEIKLLTESDDHPNV 89
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILD-------DPENTYGLQEEEFLLVLEHLT 123
++ E R I +ELC N+ D EN +E + +L +
Sbjct: 90 IRYYC--SETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 124 AGMKHLRDNRLVHRDLKPGNIM-----KFICDDGSTIYKL----TDFGAARELEEDQQFM 174
+G+ HL +++HRDLKP NI+ +F D + L +DFG ++L+ Q
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 175 SL-----YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
GT + P++ E + R+ ++D++S+G Y++ + P+G
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRR-----LTRSIDIFSMGCVFYYILSKGK--HPFGD 256
Query: 230 RRNKET 235
+ ++E+
Sbjct: 257 KYSRES 262
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKV--IVMELCTGGSLFNILDDPENTYG-LQEE 113
RE + + H IV + E + G + IVME G +L +I+ +T G + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----HTEGPMTPK 116
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--- 170
+ V+ + N ++HRD+KP NIM + K+ DFG AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSGNS 172
Query: 171 -QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Q ++ GT +YL P+ G + A D++S+G LY V TG PF
Sbjct: 173 VTQTAAVIGTAQYLSPEQAR--------GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKV--IVMELCTGGSLFNILDDPENTYG-LQEE 113
RE + + H IV + E + G + IVME G +L +I+ +T G + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----HTEGPMTPK 116
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--- 170
+ V+ + N ++HRD+KP NIM + K+ DFG AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSGNS 172
Query: 171 -QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Q ++ GT +YL P+ G + A D++S+G LY V TG PF
Sbjct: 173 VTQTAAVIGTAQYLSPEQAR--------GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K N +A+K +QL RE E+ ++H NI+++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 76 IEEEQEGRGKVIVM-ELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ +M E G L+ L +G E+ +E L + + + +
Sbjct: 83 YFHD---RKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP N++ + G K+ DFG + ++ + GT +YL P+M E
Sbjct: 136 VIHRDIKPENLL--MGYKGEL--KIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIE---- 186
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
GKT VDLW GV Y G PF
Sbjct: 187 ----GKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K N +A+K +QL RE E+ ++H NI+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 76 IEEEQEGRGKVIVM-ELCTGGSLFNILDDPENTYG-LQEEEFLLVLEHLTAGMKHLRDNR 133
+ R ++ +M E G L+ L +G E+ +E L + + + +
Sbjct: 82 YFHD---RKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP N++ + G K+ DFG + ++ + GT +YL P+M E
Sbjct: 135 VIHRDIKPENLL--MGYKGEL--KIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIE---- 185
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
GKT VDLW GV Y G PF
Sbjct: 186 ----GKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQVIQ-----MELDHERMSYLLYQMLXGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDXTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 42/246 (17%)
Query: 13 CTTSVLGKGATG-AVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK-HENI 70
+ +LG G++G VFQG + G PVAVK + D+ + E ++L + H N+
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQ--GRPVAVKRM----LIDFCDIALMEIKLLTESDDHPNV 89
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILD-------DPENTYGLQEEEFLLVLEHLT 123
++ E R I +ELC N+ D EN +E + +L +
Sbjct: 90 IRYYC--SETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 124 AGMKHLRDNRLVHRDLKPGNIM-----KFICDDGSTIYKL----TDFGAARELEEDQQFM 174
+G+ HL +++HRDLKP NI+ +F D + L +DFG ++L+ Q
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 175 SL-----YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
GT + P++ E + R+ ++D++S+G Y++ + P+G
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRR-----LTRSIDIFSMGCVFYYILSKGK--HPFGD 256
Query: 230 RRNKET 235
+ ++E+
Sbjct: 257 KYSRES 262
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKV--IVMELCTGGSLFNILDDPENTYG-LQEE 113
RE + + H IV + E + G + IVME G +L +I+ +T G + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----HTEGPMTPK 116
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--- 170
+ V+ + N ++HRD+KP NIM + K+ DFG AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSGNS 172
Query: 171 -QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Q ++ GT +YL P+ G + A D++S+G LY V TG PF
Sbjct: 173 VTQTAAVIGTAQYLSPEQAR--------GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 86 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 139
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 140 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 191
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 192 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 130 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 183
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 184 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 235
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 236 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G VIV E C G+L L N Y + E+ L LEHL
Sbjct: 132 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD-------- 238
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 239 ------PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 290
Query: 230 RRNKE 234
+ E
Sbjct: 291 VKIDE 295
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 28/249 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + E+ V + G+ +LR+ ++
Sbjct: 72 AFYSD---GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 126 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ---- 176
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNK-------ETMYYITTKKASG 246
G + D+WS+G++L +A G P P + + E + YI +
Sbjct: 177 ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPK 232
Query: 247 VISGTQTSE 255
+ SG + E
Sbjct: 233 LPSGVFSLE 241
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 79 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 136 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 189 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 14 TTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIV 71
V+G+GA G V +K + + A+K ++ ++ D E +++ +V
Sbjct: 79 VVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 138
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNIL---DDPENTYGLQEEEFLLVLEHLTAGMKH 128
+L Q+ + +VME GG L N++ D PE E +L L+ + +
Sbjct: 139 QLFC--AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHS---- 192
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM--SLYGTEEYLHPD 186
L+HRD+KP N++ D KL DFG +++E + GT +Y+ P+
Sbjct: 193 ---MGLIHRDVKPDNMLL----DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPE 245
Query: 187 MYERAVLRKPVGKTF-GATVDLWSIGVTLYHVATGNLPF 224
VL+ G + G D WS+GV L+ + G+ PF
Sbjct: 246 -----VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 96 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 150
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D+ I ++TDFG A+ ++ + L GT EYL P++
Sbjct: 151 YRDLKPENLL---IDEQGYI-QVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 197
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 198 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 86 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 139
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 140 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 191
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 192 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 45/241 (18%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEF--LLVLEHL------- 122
LL + G VIV E C G+L L N + ++ + L LEHL
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 123 TAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEY 182
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILL----SEKNVVKIXDFGLARDIYKD------------ 197
Query: 183 LHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGGRRNK 233
PD + R P+ T+ D+WS GV L+ + + L PY G +
Sbjct: 198 --PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID 253
Query: 234 E 234
E
Sbjct: 254 E 254
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 85 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 138
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 139 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 190
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 191 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 82
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 83 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 140 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 192
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 193 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 219
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 78 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 132
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ +FG + ++ +L GT +YL P+M E
Sbjct: 133 HRDIKPENLL--LGSAGEL--KIANFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 182 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 79 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 136 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 188
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 189 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 215
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 80
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 81 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 138 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 190
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 191 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 217
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 93 FTPQKTLEEFQDVYLVMEL-MDANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA 146
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 147 GIIHRDLKPSNI---VVKSDCTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 198
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 199 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G +K + E VAVK + + +V+ RE + ++H NIV+ +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID-ENVK-REIINHRSLRHPNIVRFKEVI 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
IVME +GG LF + N E+E + L +G+ + ++ HR
Sbjct: 84 LTPTHLA--IVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 138
Query: 138 DLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
DLK N + DGS K+ DFG ++ Q S GT Y+ P++ +L+K
Sbjct: 139 DLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV----LLKK 190
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFR-PYGGRRNKETMYYI 239
+ G D+WS GVTLY + G PF P + ++T++ I
Sbjct: 191 ---EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 141 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 194 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 80
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 81 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 138 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 190
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 191 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 217
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G +K + E VAVK + + + RE + ++H NIV+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAAN--VKREIINHRSLRHPNIVRFKEVI 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
IVME +GG LF + N E+E + L +G+ + ++ HR
Sbjct: 85 LTPTHLA--IVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
Query: 138 DLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
DLK N + DGS K+ DFG ++ Q S GT Y+ P++ +L+K
Sbjct: 140 DLKLENTLL----DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV----LLKK 191
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G D+WS GVTLY + G PF
Sbjct: 192 ---EYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 29/250 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S+LG+GA G V +K GE VA+K +RE ++LK KHENI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 76 IEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
I+ E +V +++ L ++ +T L ++ + +K L +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVI----STQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 134 LVHRDLKPGNIM-KFICDDGSTIYKLTDFGAARELEEDQQFMS-----LYGTEEYLHPDM 187
++HRDLKP N++ CD K+ DFG AR ++E S G E++
Sbjct: 133 VIHRDLKPSNLLINSNCD-----LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP-YGGRRNKETMYYITTKKASG 246
Y RA + +D+WS G L + RP + GR + + I G
Sbjct: 188 Y-RAPEVMLTSAKYSRAMDVWSCGCILAELFLR----RPIFPGRDYRHQLLLIF-----G 237
Query: 247 VISGTQTSEN 256
+I GT S+N
Sbjct: 238 II-GTPHSDN 246
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 99/240 (41%), Gaps = 49/240 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G +++ E C G+L L N Y + E+ L LEHL
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIXKD-------- 192
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 193 ------PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 244
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 99/240 (41%), Gaps = 49/240 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G +++ E C G+L L N Y + E+ L LEHL
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD-------- 192
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 193 ------PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 244
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 141 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 193
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 194 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 220
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 91
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 92 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E K
Sbjct: 149 DLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 201
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 202 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 228
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 76
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I++E T G+L + L + N + L + +++ M++L +HR
Sbjct: 77 TREPPF--YIIIEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + G + + E K
Sbjct: 134 DLAARN-----CLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYNK- 186
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 187 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ +++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D K+TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLMI----DQQGYIKVTDFGLAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ + + +A+K QL RE E+ ++H NI++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 80 YF--HDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYITELANALSYCHSKRVI 134
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + +G K+ DFG + ++ +L GT +YL P+M E
Sbjct: 135 HRDIKPENLL--LGSNGEL--KIADFGWSVHAPSSRR-DTLCGTLDYLPPEMIE------ 183
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 184 --GRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKV--IVMELCTGGSLFNILDDPENTYG-LQEE 113
RE + + H IV + E + G + IVME G +L +I+ +T G + +
Sbjct: 78 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----HTEGPMTPK 133
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--- 170
+ V+ + N ++HRD+KP NIM + K+ DFG AR + +
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMI----SATNAVKVMDFGIARAIADSGNS 189
Query: 171 -QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Q ++ GT +YL P+ G + A D++S+G LY V TG PF
Sbjct: 190 VTQTAAVIGTAQYLSPEQAR--------GDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 76
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 186 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 99/240 (41%), Gaps = 49/240 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPEN---TYGLQEEEF---LLVLEHLTA- 124
LL + G +++ E C G+L L N Y + E+ L LEHL
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD-------- 192
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 193 ------PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 244
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 76
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 186 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 102 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 156
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 157 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-DDLCGTLDYLPPEMIE------ 205
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 206 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLXGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 77
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 129
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 130 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 187 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 79
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I++E T G+L + L + N + L + +++ M++L +HR
Sbjct: 80 TREPPF--YIIIEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + G + + E K
Sbjct: 137 DLAARN-----CLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYNK- 189
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 190 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 216
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNIL-------DDPENTYGLQEEEFLLVLEHLTAGMK 127
+ + VME GG LF L +D YG E + L++L +
Sbjct: 75 YSFQTHDRL--CFVMEYANGGELFFHLSRERVFSEDRARFYG---AEIVSALDYLHS--- 126
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPD 186
+ +V+RDLK N+M + DG K+TDFG +E +D M + GT EYL P+
Sbjct: 127 ---EKNVVYRDLKLENLM--LDKDGHI--KITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ E +G VD W +GV +Y + G LPF
Sbjct: 180 VLE--------DNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 79 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ +FG + ++ +L GT +YL P+M E
Sbjct: 134 HRDIKPENLL--LGSAGEL--KIANFGWSVHAPSSRR-TTLCGTLDYLPPEMIE------ 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 183 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 76
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 186 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNIL-------DDPENTYGLQEEEFLLVLEHLTAGMK 127
+ + VME GG LF L +D YG E + L++L +
Sbjct: 215 YSFQTHDRL--CFVMEYANGGELFFHLSRERVFSEDRARFYGA---EIVSALDYLHS--- 266
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPD 186
+ +V+RDLK N+M + DG K+TDFG +E +D M + GT EYL P+
Sbjct: 267 ---EKNVVYRDLKLENLM--LDKDGHI--KITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ E +G VD W +GV +Y + G LPF
Sbjct: 320 VLE--------DNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 84
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 136
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 137 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 194 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 92 FTPQKTLEEFQDVYLVMEL-MDANLXQVIQ-----MELDHERMSYLLYQMLXGIKHLHSA 145
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 146 GIIHRDLKPSNI---VVKSDXTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 197
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 198 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNIL-------DDPENTYGLQEEEFLLVLEHLTAGMK 127
+ + VME GG LF L +D YG E + L++L +
Sbjct: 76 YSFQTHDRL--CFVMEYANGGELFFHLSRERVFSEDRARFYG---AEIVSALDYLHS--- 127
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPD 186
+ +V+RDLK N+M + DG K+TDFG +E +D M + GT EYL P+
Sbjct: 128 ---EKNVVYRDLKLENLM--LDKDGHI--KITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ E +G VD W +GV +Y + G LPF
Sbjct: 181 VLE--------DNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM-REFEVLKKVKHENIVKLLAI 76
+G GA G V + VA+K ++ + H + RE ++K V H+NI+ LL +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 77 EEEQ----EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
Q E + +VMEL +L ++ L E +L + G+KHL
Sbjct: 85 FTPQKTLEEFQDVYLVMEL-MDANLXQVIQ-----MELDHERMSYLLYQMLXGIKHLHSA 138
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP NI + T+ K+ DFG AR T Y P++
Sbjct: 139 GIIHRDLKPSNI---VVKSDXTL-KILDFGLARTAGTSFMMTPYVVTRYYRAPEVI---- 190
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNL--PFRPYGGRRNK 233
+G + VD+WS+G + + + P R Y + NK
Sbjct: 191 ----LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 88
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 198 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 95
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 147
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 148 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 205 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNIL-------DDPENTYGLQEEEFLLVLEHLTAGMK 127
+ + VME GG LF L +D YG E + L++L +
Sbjct: 77 YSFQTHDRL--CFVMEYANGGELFFHLSRERVFSEDRARFYG---AEIVSALDYLHS--- 128
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPD 186
+ +V+RDLK N+M + DG K+TDFG +E +D M + GT EYL P+
Sbjct: 129 ---EKNVVYRDLKLENLM--LDKDGHI--KITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ E +G VD W +GV +Y + G LPF
Sbjct: 182 VLE--------DNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLAGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKV--IVMELCTGGSLFNILDDPENTYG-LQEE 113
RE + + H IV + E + G + IVME G +L +I+ +T G + +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV----HTEGPMTPK 116
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--- 170
+ V+ + N ++HRD+KP NI+ + K+ DFG AR + +
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILI----SATNAVKVVDFGIARAIADSGNS 172
Query: 171 -QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Q ++ GT +YL P+ G + A D++S+G LY V TG PF
Sbjct: 173 VXQTAAVIGTAQYLSPEQAR--------GDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEE------EFLLVLEHLTA- 124
LL + G VIV E C G+L L N + +E + L LEHL
Sbjct: 97 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 125 ------GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYG 178
GM+ L + +HRDL NI+ + K+ DFG AR++ +D
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD-------- 203
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
PD + R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 204 ------PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 255
Query: 230 RRNKE 234
+ E
Sbjct: 256 VKIDE 260
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 25/221 (11%)
Query: 12 WCTTSV---LGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKH 67
WC ++ +G G+ G V + + +G VAVK Q H + +RE ++K+++H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
NIV + + IV E + GSL+ +L L E L + + GM
Sbjct: 94 PNIVLFMGAVTQPPNLS--IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 128 HL--RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS--LYGTEEYL 183
+L R+ +VHRDLK N++ D T+ K+ DFG +R L+ S GT E++
Sbjct: 152 YLHNRNPPIVHRDLKSPNLL---VDKKYTV-KVCDFGLSR-LKASXFLXSKXAAGTPEWM 206
Query: 184 HPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P+ VLR + D++S GV L+ +AT P+
Sbjct: 207 APE-----VLRD---EPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 89
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 141
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 142 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 199 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 45/230 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 104
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 156
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 157 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATGNLPF 224
Y P++ FGAT +D+WS G L + G F
Sbjct: 214 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL--- 74
LG+G G VF+ NK + A+K + + MRE + L K++H IV+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 75 ----AIEEEQEGRGKV---IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
E+ Q KV I M+LC +L + ++ + L + + ++
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ------FMSLY---- 177
L L+HRDLKP NI F DD + K+ DFG +++D++ M Y
Sbjct: 133 FLHSKGLMHRDLKPSNIF-FTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 178 ---GTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHV 217
GT+ Y+ P+ G ++ VD++S+G+ L+ +
Sbjct: 189 GQVGTKLYMSPEQIH--------GNSYSHKVDIFSLGLILFEL 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 81 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 135
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ +L GT +YL P+ E
Sbjct: 136 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-TTLCGTLDYLPPEXIE------ 184
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 185 --GRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
+LGKG G V K G A+K + + +V + E VL+ +H + L
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNIL-------DDPENTYGLQEEEFLLVLEHLTAGMK 127
+ + VME GG LF L +D YG E + L++L +
Sbjct: 218 YSFQTHDRL--CFVMEYANGGELFFHLSRERVFSEDRARFYGA---EIVSALDYLHS--- 269
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPD 186
+ +V+RDLK N+M + DG K+TDFG +E +D M + GT EYL P+
Sbjct: 270 ---EKNVVYRDLKLENLM--LDKDGHI--KITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ E +G VD W +GV +Y + G LPF
Sbjct: 323 VLE--------DNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 104 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 158
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 159 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 205
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 206 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-----NRELQIMRKLDHCNIV 76
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 186 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 102 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 157 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 203
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 204 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 88
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 198 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
LGKG G V+ K + +A+K QL RE E+ ++H NI++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ +++E G+++ L + E+ + L + + R++
Sbjct: 79 YF--HDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYCHSKRVI 133
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
HRD+KP N++ + G K+ DFG + ++ L GT +YL P+M E
Sbjct: 134 HRDIKPENLL--LGSAGEL--KIADFGWSVHAPSSRR-DDLCGTLDYLPPEMIE------ 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
G+ VDLWS+GV Y G PF
Sbjct: 183 --GRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 92/214 (42%), Gaps = 27/214 (12%)
Query: 16 SVLGKGATGAV----FQGVNKNNGEPVAVKTFNQLSHMRP---HDVQMREFEVLKKVKHE 68
S LGKG G+V + + N G VAVK QL H P D Q RE ++LK + +
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVK---QLQHSGPDQQRDFQ-REIQILKALHSD 68
Query: 69 NIVKLLAIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
IVK + GR ++ +VME G L + L + L LL + GM+
Sbjct: 69 FIVKYRGVSY-GPGRPELRLVMEYLPSGCLRDFLQ--RHRARLDASRLLLYSSQICKGME 125
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAR--ELEEDQQFMSLYGTEEYLHP 185
+L R VHRDL NI+ + K+ DFG A+ L++D + G
Sbjct: 126 YLGSRRCVHRDLAARNILV----ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF-- 179
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVAT 219
Y L F D+WS GV LY + T
Sbjct: 180 -WYAPESLSD---NIFSRQSDVWSFGVVLYELFT 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 110
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 220 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 80
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 132
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 133 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 190 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-----NRELQIMRKLDHCNIV 76
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 186 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G +K E VAVK + + +V+ RE + ++H NIV+ +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKID-ENVK-REIINHRSLRHPNIVRFKEVI 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
IVME +GG LF + N E+E + L +G+ + ++ HR
Sbjct: 85 LTPTHLA--IVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYAHAMQVAHR 139
Query: 138 DLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
DLK N + DGS K+ DFG ++ Q S GT Y+ P++ +L+K
Sbjct: 140 DLKLENTLL----DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEV----LLKK 191
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G D+WS GVTLY + G PF
Sbjct: 192 ---EYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D K+TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLMI----DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 81
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 133
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 134 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 191 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFAEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 102/245 (41%), Gaps = 51/245 (20%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAV-KTFNQLSHMRPHDVQMREFEVLKKVK-HENIVKLLA 75
LGKGA G V++ +++ GE VAV K F+ + RE +L ++ HENIV LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 76 IEEEQEGRGKVIV---MELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
+ R +V ME + NIL+ Y V+ L +K+L
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY---------VVYQLIKVIKYLHS 127
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE---------------------LEED 170
L+HRD+KP NI+ + K+ DFG +R ++D
Sbjct: 128 GGLLHRDMKPSNILL----NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 171 QQFMSLY-GTEEYLHPDMYERAVLRKPVGKT-FGATVDLWSIGVTLYHVATGNLPFRPYG 228
Q ++ Y T Y P++ +G T + +D+WS+G L + G P P
Sbjct: 184 QPILTDYVATRWYRAPEIL--------LGSTKYTKGIDMWSLGCILGEILCGK-PIFPGS 234
Query: 229 GRRNK 233
N+
Sbjct: 235 STMNQ 239
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 130 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ +L GT EYL P++
Sbjct: 185 YRDLKPENLLI----DQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLAPEII------- 231
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 232 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 27/249 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S+LG+GA G V +K GE VA+K +RE ++LK KHENI+ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 76 IEEEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
I+ E +V +++ L ++ +T L ++ + +K L +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVI----STQMLSDDHIQYFIYQTLRAVKVLHGSN 132
Query: 134 LVHRDLKPGNIM-KFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP N++ CD K+ DFG AR ++E S ++ +
Sbjct: 133 VIHRDLKPSNLLINSNCD-----LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 193 LRKP----VGKTFGATVDLWSIGVTLYHVATGNLPFRP-YGGRRNKETMYYITTKKASGV 247
R P + +D+WS G L + RP + GR + + I G+
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLR----RPIFPGRDYRHQLLLIF-----GI 238
Query: 248 ISGTQTSEN 256
I GT S+N
Sbjct: 239 I-GTPHSDN 246
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 102 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 157 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 203
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 204 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 110
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 220 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 76 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 129
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 130 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 180
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
L + + + D+WS GVT++ + T +PY G
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMT--FGSKPYDG 216
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + E+ V + G+ +LR+ ++
Sbjct: 72 AFYSD---GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 126 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ---- 176
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 177 ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + G + + E K
Sbjct: 141 DLAARN-----CLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYNK- 193
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 194 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 112
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 164
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 165 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 222 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + E+ V + G+ +LR+ ++
Sbjct: 72 AFYSD---GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 126 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ---- 176
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 177 ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + E+ V + G+ +LR+ ++
Sbjct: 72 AFYSD---GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 126 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ---- 176
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 177 ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + E+ V + G+ +LR+ ++
Sbjct: 72 AFYSD---GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 126 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ---- 176
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 177 ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 74 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + E+ V + G+ +LR+ ++
Sbjct: 134 AFYSD---GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 188 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ---- 238
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 239 ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 114
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 166
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 167 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 224 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D K+TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLMI----DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 21/230 (9%)
Query: 1 MSFLRGSTNYVWCTTSVLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQM 56
M+ LR + VLG GA G V++G+ GE PVA+K + + + + +
Sbjct: 3 MALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 62
Query: 57 REFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFL 116
E V+ V + ++ +LL I + ++ +L G L + + + ++ G Q +L
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YL 116
Query: 117 L-VLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMS 175
L + GM +L D RLVHRDL N++ K+TDFG A+ L +++
Sbjct: 117 LNWCVQIAEGMNYLEDRRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYH 172
Query: 176 LYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
G + + + L + + + D+WS GVT++ + T G+ P+
Sbjct: 173 AEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
VLGKG+ G V K G+ AVK + ++ DV+ M E +L ++ + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 75 AIEEEQEGRGKVIVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ R VME GG L F+I + + E + + + L D
Sbjct: 90 FCCFQTPDR-LFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIISALMFLHDKG 144
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAV 192
+++RDLK N++ D KL DFG +E + + GT +Y+ P++ + +
Sbjct: 145 IIYRDLKLDNVLL----DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G VD W++GV LY + G+ PF
Sbjct: 201 --------YGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ N N GE A+K + +RE +LK++KH NIVKL +
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ + V+V E L +LD E GL+ L L G+ + D R++H
Sbjct: 69 IHTK--KRLVLVFEHLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAAREL-----EEDQQFMSLYGTEEYLHPDMYERA 191
RDLKP N++ I +G K+ DFG AR + + ++L+ Y PD+ +
Sbjct: 124 RDLKPQNLL--INREGEL--KIADFGLARAFGIPVRKYTHEIVTLW----YRAPDVLMGS 175
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
K + T+D+WS+G + G P P
Sbjct: 176 -------KKYSTTIDIWSVGCIFAEMVNGT-PLFP 202
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 92 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 145
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 146 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 196
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 27/222 (12%)
Query: 12 WCTTSV---LGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKH 67
WC ++ +G G+ G V + + +G VAVK Q H + +RE ++K+++H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 68 ENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMK 127
NIV + + IV E + GSL+ +L L E L + + GM
Sbjct: 94 PNIVLFMGAVTQPPNLS--IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 128 HL--RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEY 182
+L R+ +VHR+LK N++ D T+ K+ DFG +R + F+ S GT E+
Sbjct: 152 YLHNRNPPIVHRNLKSPNLL---VDKKYTV-KVCDFGLSR--LKASTFLSSKSAAGTPEW 205
Query: 183 LHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ P+ VLR + D++S GV L+ +AT P+
Sbjct: 206 MAPE-----VLRD---EPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 84 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 137
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 138 RRLVHRDLAARNVLV----KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-----KWM 188
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 85 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 138
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 139 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 189
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 130 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 185 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 231
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 232 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKHLR 130
G++ I ME GGSL +L PE G V + G+ +LR
Sbjct: 99 AFYSD---GEISICMEHMDGGSLDQVLKKAGRIPEQILGK-------VSIAVIKGLTYLR 148
Query: 131 D-NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
+ ++++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 149 EKHKIMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ 203
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 204 --------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 84 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 137
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 138 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 188
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 82 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 135
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 136 RRLVHRDLAARNVLV----KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-----KWM 186
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 82 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 135
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 136 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 186
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
L + + + D+WS GVT++ + T +PY G
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT--FGSKPYDG 222
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ +++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLMI----DQQGYIQVTDFGLAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ N N GE A+K + +RE +LK++KH NIVKL +
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ + V+V E L +LD E GL+ L L G+ + D R++H
Sbjct: 69 IHTK--KRLVLVFEHLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G K+ DFG AR +++ T Y PD+ +
Sbjct: 124 RDLKPQNLL--INREGEL--KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS---- 175
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
K + T+D+WS+G + G P P
Sbjct: 176 ---KKYSTTIDIWSVGCIFAEMVNGT-PLFP 202
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 82 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 135
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 136 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 186
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
VLGKG G V + G+ A K + + M E ++L+KV +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 75 AIEEEQEGRGKVIVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E ++ +V+ L GG L F+I G E + + G++ L R
Sbjct: 251 YAYETKDAL--CLVLTLMNGGDLKFHIYH--MGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+V+RDLKP NI+ DD I +++D G A + E Q GT Y+ P++ +
Sbjct: 307 IVYRDLKPENIL---LDDHGHI-RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVK---- 358
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ + + D W++G LY + G PF+
Sbjct: 359 ----NERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 76
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 77 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + G + + E K
Sbjct: 134 DLAARN-----CLVGENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKWTAPESLAYNK- 186
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 187 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 88 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 141
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 142 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 192
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 85 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 138
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 139 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 189
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 107 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 160
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 161 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 211
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
VLGKG G V + G+ A K + + M E ++L+KV +V L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 75 AIEEEQEGRGKVIVMELCTGGSL-FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
E ++ +V+ L GG L F+I G E + + G++ L R
Sbjct: 251 YAYETKDAL--CLVLTLMNGGDLKFHIYH--MGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+V+RDLKP NI+ DD I +++D G A + E Q GT Y+ P++ +
Sbjct: 307 IVYRDLKPENIL---LDDHGHI-RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVK---- 358
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ + + D W++G LY + G PF+
Sbjct: 359 ----NERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 85 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 138
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 139 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 189
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P A++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAP-----AII-- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 32/228 (14%)
Query: 18 LGKGATGAVFQ----GVNKNNGE-PVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + G+ K + VAVK +H + M E +++ + +HENIV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-------DPENTYGLQEEEFLLVLEHLTA 124
LL G +++ E C G L N L D E+ L+ + L +
Sbjct: 106 NLLG--ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---E 181
GM L +HRD+ N++ + K+ DFG AR++ D ++ +
Sbjct: 164 GMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
++ P+ V + D+WS G+ L+ + + L PY G
Sbjct: 220 WMAPESIFDCV--------YTVQSDVWSYGILLWEIFS--LGLNPYPG 257
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-----NRELQIMRKLDHCNIV 155
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-DPENTYGL-----QEEEFL------LVL 119
+L + + + L +LD PE Y + + ++ L L +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNL--------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 207
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
L + ++ + HRD+KP N++ D + + KL DFG+A++L + +S +
Sbjct: 208 YQLFRSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 180 EEYLHPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
Y P++ FGAT +D+WS G L + G
Sbjct: 265 RYYRAPEL------------IFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VL GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++M+L G L + + + ++ G Q +LL + GM +L D
Sbjct: 89 LLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 142
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 143 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 193
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 89 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 142
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 143 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 193
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG+G+ G V + +K G AVK +R ++ E + IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKK------VRLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+EG I MEL GGSL ++ + L E+ L L G+++L R++H
Sbjct: 134 --REGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY------GTEEYLHPDMYERA 191
D+K N++ + DGS L DFG A L+ D SL GTE ++ P++
Sbjct: 189 DVKADNVL--LSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV--- 242
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+GK A VD+WS + H+ G P+ Y
Sbjct: 243 -----MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 273
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 32/228 (14%)
Query: 18 LGKGATGAVFQ----GVNKNNGE-PVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + G+ K + VAVK +H + M E +++ + +HENIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILD-------DPENTYGLQEEEFLLVLEHLTA 124
LL G +++ E C G L N L D E+ L+ + L +
Sbjct: 114 NLLG--ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---E 181
GM L +HRD+ N++ + K+ DFG AR++ D ++ +
Sbjct: 172 GMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 182 YLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
++ P+ V + D+WS G+ L+ + + L PY G
Sbjct: 228 WMAPESIFDCV--------YTVQSDVWSYGILLWEIFS--LGLNPYPG 265
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 82 LLGICLTSTVQ---LITQLMPFGXLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 135
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 136 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 186
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 89 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 142
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 143 RRLVHRDLAARNVLV----KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-----KWM 193
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ N N GE A+K + +RE +LK++KH NIVKL +
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ + V+V E L +LD E GL+ L L G+ + D R++H
Sbjct: 69 IHTK--KRLVLVFEHLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G K+ DFG AR +++ T Y PD+ +
Sbjct: 124 RDLKPQNLL--INREGEL--KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS---- 175
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
K + T+D+WS+G + G P P
Sbjct: 176 ---KKYSTTIDIWSVGCIFAEMVNGA-PLFP 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 107/247 (43%), Gaps = 30/247 (12%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 31 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGMKHLR 130
G++ I ME GGSL +L PE G V + G+ +LR
Sbjct: 91 AFYSD---GEISICMEHMDGGSLDQVLKKAGRIPEQILGK-------VSIAVIKGLTYLR 140
Query: 131 D-NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
+ ++++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 141 EKHKIMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQ 195
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNK-ETMYYITTKKASGVI 248
G + D+WS+G++L +A G P G E + YI + +
Sbjct: 196 --------GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLP 247
Query: 249 SGTQTSE 255
SG + E
Sbjct: 248 SGVFSLE 254
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG G V G + N VAVK + + + E V+ +++H N+V+LL +
Sbjct: 201 IGKGEFGDVMLGDYRGN--KVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQLLGVI 255
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E++G G IV E GSL + L + L + L + M++L N VHR
Sbjct: 256 VEEKG-GLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHR 313
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKPV 197
DL N++ + +D + K++DFG +E Q L ++ P+ LR+
Sbjct: 314 DLAARNVL--VSED--NVAKVSDFGLTKEASSTQDTGKL--PVKWTAPE-----ALRE-- 360
Query: 198 GKTFGATVDLWSIGVTLYHVAT-GNLPF 224
K F D+WS G+ L+ + + G +P+
Sbjct: 361 -KKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG G V G + N VAVK + + + E V+ +++H N+V+LL +
Sbjct: 29 IGKGEFGDVMLGDYRGN--KVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQLLGVI 83
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E++G G IV E GSL + L + L + L + M++L N VHR
Sbjct: 84 VEEKG-GLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHR 141
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKPV 197
DL N++ + +D + K++DFG +E Q L ++ P+ LR+
Sbjct: 142 DLAARNVL--VSED--NVAKVSDFGLTKEASSTQDTGKL--PVKWTAPE-----ALRE-- 188
Query: 198 GKTFGATVDLWSIGVTLYHVAT-GNLPF 224
K F D+WS G+ L+ + + G +P+
Sbjct: 189 -KKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V +G K G+ VA+KT R + E ++ + +H NI++L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 74 LAIEEEQEGRGKVIVMELCTGGSL--FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
+ +I+ E G+L F L+D + T + + +L + +GM++L +
Sbjct: 81 EGVVTNS--MPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAE 134
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE---DQQFMSLYGTEEYLHPDMY 188
VHRDL NI+ + + + K++DFG +R LEE D + S G + +
Sbjct: 135 MSYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
E RK F + D WS G+ ++ V + RPY N++ + I
Sbjct: 191 EAIAFRK-----FTSASDAWSYGIVMWEVMS--FGERPYWDMSNQDVINAI 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 130 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 185 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 231
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 232 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLMI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG G V G + N VAVK + + + E V+ +++H N+V+LL +
Sbjct: 14 IGKGEFGDVMLGDYRGN--KVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQLLGVI 68
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E++G G IV E GSL + L + L + L + M++L N VHR
Sbjct: 69 VEEKG-GLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHR 126
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKPV 197
DL N++ + +D + K++DFG +E Q L ++ P+ LR+
Sbjct: 127 DLAARNVL--VSED--NVAKVSDFGLTKEASSTQDTGKL--PVKWTAPE-----ALRE-- 173
Query: 198 GKTFGATVDLWSIGVTLYHVAT-GNLPF 224
K F D+WS G+ L+ + + G +P+
Sbjct: 174 -KKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + + M + ++E V+K++KH N+V+LL +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEF-LKEAAVMKEIKHPNLVQLLGVC 285
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 286 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
+L N C G + K+ DFG +R + D + + G + + E K
Sbjct: 343 NLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 395
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 396 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 422
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 38/242 (15%)
Query: 17 VLGKGATG-AVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK-HENIVKLL 74
+LG G++G VFQG + G PVAVK + D+ + E ++L + H N+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ--GRPVAVKRM----LIDFCDIALMEIKLLTESDDHPNVIRYY 75
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILD-------DPENTYGLQEEEFLLVLEHLTAGMK 127
E R I +ELC N+ D EN +E + +L + +G+
Sbjct: 76 C--SETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 128 HLRDNRLVHRDLKPGNIM-----KFICDDGSTIYKL----TDFGAARELEEDQQFMSL-- 176
HL +++HRDLKP NI+ +F D + L +DFG ++L+ Q
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 177 ---YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNK 233
GT + P++ E + + + ++D++S+G Y++ + P+G + ++
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQ-TKRRLTRSIDIFSMGCVFYYILSKGK--HPFGDKYSR 246
Query: 234 ET 235
E+
Sbjct: 247 ES 248
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 38/242 (15%)
Query: 17 VLGKGATG-AVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK-HENIVKLL 74
+LG G++G VFQG + G PVAVK + D+ + E ++L + H N+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ--GRPVAVKRM----LIDFCDIALMEIKLLTESDDHPNVIRYY 75
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILD-------DPENTYGLQEEEFLLVLEHLTAGMK 127
E R I +ELC N+ D EN +E + +L + +G+
Sbjct: 76 C--SETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 128 HLRDNRLVHRDLKPGNIM-----KFICDDGSTIYKL----TDFGAARELEEDQ-----QF 173
HL +++HRDLKP NI+ +F D + L +DFG ++L+ Q
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 174 MSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNK 233
+ GT + P++ E + + + ++D++S+G Y++ + P+G + ++
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQ-TKRRLTRSIDIFSMGCVFYYILSKGK--HPFGDKYSR 246
Query: 234 ET 235
E+
Sbjct: 247 ES 248
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKV-KHENIVKL 73
+LGKG+ G VF K + A+K + + DV+ M E VL +H + +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ +E VME GG L + + + L F + G++ L
Sbjct: 84 FCTFQTKENL--FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAA--EIILGLQFLHSKG 138
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAV 192
+V+RDLK NI+ + DG K+ DFG +E + D + GT +Y+ P++
Sbjct: 139 IVYRDLKLDNIL--LDKDGHI--KIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL---- 190
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G+ + +VD WS GV LY + G PF
Sbjct: 191 ----LGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 95 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 149
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + +L GT EYL P++
Sbjct: 150 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEII------- 196
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 197 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 37/222 (16%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ T V+G G+ G V+Q ++GE VA+K Q + RE ++++K+ H NIV
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-----NRELQIMRKLDHCNIV 76
Query: 72 KLLAIEEEQEGRGKVIVMELC---TGGSLFNILDDPENTYGLQEEEFLLV-----LEHLT 123
+L + + + L +++ + Y ++ ++ + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRV----ARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYL 183
+ ++ + HRD+KP N++ D + + KL DFG+A++L + +S + Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLL---LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 184 HPDMYERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
P++ FGAT +D+WS G L + G
Sbjct: 190 APEL------------IFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V + KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D K+TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLMI----DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V + KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D K+TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLMI----DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 21/229 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K G+ VA+KT + + E ++ + H N++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + +I+ E GSL + L + + + + + +L + AGMK+L D
Sbjct: 100 EGVVTKSTP--VMIITEFMENGSLDSFLRQNDGQFTVIQ--LVGMLRGIAAGMKYLADMN 155
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLYGTEEYLHPDMYER 190
VHRDL NI+ + + + K++DFG +R LE+D + S G + + E
Sbjct: 156 YVHRDLAARNILV----NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
RK F + D+WS G+ ++ V + RPY N++ + I
Sbjct: 212 IQYRK-----FTSASDVWSYGIVMWEVMSYGE--RPYWDMTNQDVINAI 253
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKV-KHENIVKL 73
+LGKG+ G VF K + A+K + + DV+ M E VL +H + +
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ +E VME GG L + + + L F + G++ L
Sbjct: 85 FCTFQTKENL--FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAA--EIILGLQFLHSKG 139
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAV 192
+V+RDLK NI+ + DG K+ DFG +E + D + GT +Y+ P++
Sbjct: 140 IVYRDLKLDNIL--LDKDGHI--KIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL---- 191
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G+ + +VD WS GV LY + G PF
Sbjct: 192 ----LGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREF----EVLKKVKHENIVKL 73
LG G G V+ N VAVKT M+P + + F V+K ++H+ +VKL
Sbjct: 23 LGAGQFGEVWMATY-NKHTKVAVKT------MKPGSMSVEAFLAEANVMKTLQHDKLVKL 75
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A+ ++ I+ E GSL + L E + + + + GM +
Sbjct: 76 HAVVTKEP---IYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+HRDL+ NI+ S + K+ DFG AR + ED ++ + G + +
Sbjct: 132 YIHRDLRAANILV----SASLVCKIADFGLARVI-EDNEYTAREGAKFPIK--------W 178
Query: 194 RKPVGKTFGATV---DLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
P FG+ D+WS G+ L + T G + PY G N E +
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI---PYPGMSNPEVI 222
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V + KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N+M D K+TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLMI----DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + + M + ++E V+K++KH N+V+LL +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEF-LKEAAVMKEIKHPNLVQLLGVC 282
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 283 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
+L N C G + K+ DFG +R + D + + G + + E K
Sbjct: 340 NLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 392
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 393 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 419
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+ G V + +K G AVK +R ++ E + IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKK------VRLEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+EG I MEL GGSL ++ + L E+ L L G+++L R++H
Sbjct: 120 --REGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY------GTEEYLHPDMYERA 191
D+K N++ + DGS L DFG A L+ D SL GTE ++ P++
Sbjct: 175 DVKADNVL--LSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV--- 228
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+GK A VD+WS + H+ G P+ Y
Sbjct: 229 -----MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V++GV K VAVKT + + M + ++E V+K++KH N+V+LL +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEF-LKEAAVMKEIKHPNLVQLLGVC 324
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ I+ E T G+L + L + N + L + +++ M++L +HR
Sbjct: 325 TREPPF--YIITEFMTYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
+L N C G + K+ DFG +R + D + + G + + E K
Sbjct: 382 NLAARN-----CLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNK- 434
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
F D+W+ GV L+ +AT + PY G
Sbjct: 435 ----FSIKSDVWAFGVLLWEIATYGM--SPYPG 461
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG AR LE+D + + Y T P + E
Sbjct: 168 YVHRDLAARNILI----NSNLVCKVSDFGLARVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G +K + E VAVK + + +V+ RE + ++H NIV+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID-ENVK-REIINHRSLRHPNIVRFKEVI 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
IVME +GG LF + N E+E + L +G+ + ++ HR
Sbjct: 85 LTPTHLA--IVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
Query: 138 DLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
DLK N + DGS K+ FG ++ Q S GT Y+ P++ +L+K
Sbjct: 140 DLKLENTLL----DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEV----LLKK 191
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G D+WS GVTLY + G PF
Sbjct: 192 ---EYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G GA G V + G+ VA+K N + +RE ++LK KH+NI+ + I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 77 EEEQEGRGKV----IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
G+ +V++L L I+ ++ L E L L G+K++
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMES-DLHQII---HSSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL----EEDQQFMSLY-GTEEYLHPDM 187
+++HRDLKP N++ + + K+ DFG AR L E Q FM+ Y T Y P++
Sbjct: 178 QVIHRDLKPSNLLV----NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 188 YERAVLRKPVGKTFGATVDLWSIG 211
+ +DLWS+G
Sbjct: 234 MLSL-------HEYTQAIDLWSVG 250
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 35/227 (15%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREF----EVLKKVKHENIVKL 73
LG G G V+ N VAVKT M+P + + F V+K ++H+ +VKL
Sbjct: 196 LGAGQFGEVWMATY-NKHTKVAVKT------MKPGSMSVEAFLAEANVMKTLQHDKLVKL 248
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A+ ++ I+ E GSL + L E + + + + GM +
Sbjct: 249 HAVVTKEP---IYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRN 304
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYER 190
+HRDL+ NI+ S + K+ DFG AR + ED ++ + G + ++ P+
Sbjct: 305 YIHRDLRAANILV----SASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINF 359
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+F D+WS G+ L + T G + PY G N E +
Sbjct: 360 G--------SFTIKSDVWSFGILLMEIVTYGRI---PYPGMSNPEVI 395
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+GKG G V G + N VAVK + + + E V+ +++H N+V+LL +
Sbjct: 20 IGKGEFGDVMLGDYRGN--KVAVKCIKNDATAQAF---LAEASVMTQLRHSNLVQLLGVI 74
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
E++G G IV E GSL + L + L + L + M++L N VHR
Sbjct: 75 VEEKG-GLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNNFVHR 132
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKPV 197
DL N++ + +D + K++DFG +E Q L ++ P+ A
Sbjct: 133 DLAARNVL--VSED--NVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREA------ 180
Query: 198 GKTFGATVDLWSIGVTLYHVAT-GNLPF 224
F D+WS G+ L+ + + G +P+
Sbjct: 181 --AFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + +L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+G+ G V + +K G AVK +R ++ E + IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKK------VRLEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+EG I MEL GGSL ++ + L E+ L L G+++L R++H
Sbjct: 136 --REGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY------GTEEYLHPDMYERA 191
D+K N++ + DGS L DFG A L+ D SL GTE ++ P++
Sbjct: 191 DVKADNVL--LSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV--- 244
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+GK A VD+WS + H+ G P+ Y
Sbjct: 245 -----MGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G VF+ +K +G +A K + + +RE +VL + IV
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + E+ V + G+ +LR+ ++
Sbjct: 75 AFYSD---GEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D+ GT Y+ P+ +
Sbjct: 129 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQ---- 179
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 180 ----GTHYSVQSDIWSMGLSLVEMAVGRYPRPP 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 83 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 138
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 139 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 192
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 193 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 83 EGVVTKS--KPVMIVTEXMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 138
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 139 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 192
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 193 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G+GA G V + VA+K + H +RE ++L + +HEN++ + I
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 78 EEQ--EGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E V +++ L+ +L + L + L + G+K++ ++
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLL----KSQQLSNDHICYFLYQILRGLKYIHSANVL 166
Query: 136 HRDLKPGNIM-KFICDDGSTIYKLTDFGAAR--ELEEDQQ--FMSLYGTEEYLHPDMYER 190
HRDLKP N++ CD K+ DFG AR + E D T Y P++
Sbjct: 167 HRDLKPSNLLINTTCD-----LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
+ K + ++D+WS+G L + + N P P
Sbjct: 222 S-------KGYTKSIDIWSVGCILAEMLS-NRPIFP 249
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 168 FVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G GA G V + G+ VA+K N + +RE ++LK KH+NI+ + I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 77 EEEQEGRGKV----IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
G+ +V++L L I+ ++ L E L L G+K++
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMES-DLHQII---HSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL----EEDQQFMSLY-GTEEYLHPDM 187
+++HRDLKP N++ + + K+ DFG AR L E Q FM+ Y T Y P++
Sbjct: 179 QVIHRDLKPSNLLV----NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 188 YERAVLRKPVGKTFGATVDLWSIG 211
+ +DLWS+G
Sbjct: 235 MLSL-------HEYTQAIDLWSVG 251
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VL GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 82 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 135
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 136 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 186
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 12 WCTTSV-LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENI 70
W T + LG+G+ G V + +K G AVK +R + E + I
Sbjct: 94 WATHQLRLGRGSFGEVHRMEDKQTGFQCAVKK------VRLEVFRAEELMACAGLTSPRI 147
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
V L +EG I MEL GGSL ++ + L E+ L L G+++L
Sbjct: 148 VPLYGAV--REGPWVNIFMELLEGGSLGQLVKE---QGCLPEDRALYYLGQALEGLEYLH 202
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY------GTEEYLH 184
R++H D+K N++ + DGS L DFG A L+ D SL GTE ++
Sbjct: 203 SRRILHGDVKADNVL--LSSDGSHA-ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMA 259
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P++ +G++ A VD+WS + H+ G P+
Sbjct: 260 PEVV--------LGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 100 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 155
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 156 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 209
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 210 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 248
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K G+ VA+KT + + E ++ + H N+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ G+ +IV+E G+L L + + + + + +L + AGM++L D
Sbjct: 110 EGVV--TRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQ--LVGMLRGIAAGMRYLADMG 165
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R +E+D + ++Y T P + E
Sbjct: 166 YVHRDLAARNILV----NSNLVCKVSDFGLSRVIEDDPE--AVYTTTGGKIPVRWTAPEA 219
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
RK F + D+WS G+ ++ V + RPY N++ + I
Sbjct: 220 IQYRK-----FTSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKAI 261
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 110 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 165
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 166 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 219
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 220 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLK-KVKHENIVKLLAI 76
GK G +F + VA+KT + P + R +L+ +++H N+V LL +
Sbjct: 39 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGV 97
Query: 77 EEEQEGRGKVIVMELCTGGSL--FNILDDPENTYG-----------LQEEEFLLVLEHLT 123
+ + ++ C+ G L F ++ P + G L+ +F+ ++ +
Sbjct: 98 VTKDQPLS--MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIA 155
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYL 183
AGM++L + +VH+DL N++ + D + K++D G RE+ + L G
Sbjct: 156 AGMEYLSSHHVVHKDLATRNVLVY---DKLNV-KISDLGLFREVYA-ADYYKLLGNSLLP 210
Query: 184 HPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
M A++ GK F D+WS GV L+ V + L +PY G N++ + I ++
Sbjct: 211 IRWMAPEAIM---YGK-FSIDSDIWSYGVVLWEVFSYGL--QPYCGYSNQDVVEMIRNRQ 264
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 168 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 168 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K +G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D ++TDFG A+ ++ + L GT E L P++
Sbjct: 164 YRDLKPENLLI----DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEALAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG GA G V++G+ GE PVA+ + + + + + E V+ V + ++ +
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 116 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 169
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 170 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 220
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 26/218 (11%)
Query: 17 VLGKGATGAVF---QGVNKNNGEPVAVKTFNQ---LSHMRPHDVQMREFEVLKKVKHENI 70
VLG GA G VF + + G+ A+K + + + + E +VL+ ++
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
+ L + E + +I ++ GG LF L E E E + + + ++HL
Sbjct: 121 LVTLHYAFQTETKLHLI-LDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLH 176
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL--EEDQQFMSLYGTEEYLHPDMY 188
+++RD+K NI+ + +G + LTDFG ++E +E ++ GT EY+ PD+
Sbjct: 177 KLGIIYRDIKLENIL--LDSNGHVV--LTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 189 ERAVLRKPVGKTFG--ATVDLWSIGVTLYHVATGNLPF 224
G G VD WS+GV +Y + TG PF
Sbjct: 233 R--------GGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEXMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 168 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 168 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 168 YVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
VLG+GA V +N + AVK Q H+R RE E+L + + V L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR--VFREVEMLYQCQGHRNVLELI 77
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+E R +V E GGS IL E E +V++ + + + L + +
Sbjct: 78 EFFEEEDR-FYLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 136 HRDLKPGNIMKFICDDGSTI--YKLTDFGAARELE--------EDQQFMSLYGTEEYLHP 185
HRDLKP NI+ C+ + + K+ DFG ++ + ++ G+ EY+ P
Sbjct: 134 HRDLKPENIL---CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ E + + DLWS+GV LY + +G PF
Sbjct: 191 EVVEAFSEEASI---YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEXMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 168 AVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VL GA G V++G+ GE PVA+K + + + + + E V+ V + ++ +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLL-VLEHLTAGMKHLRD 131
LL I + ++ +L G L + + + ++ G Q +LL + GM +L D
Sbjct: 89 LLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQ---YLLNWCVQIAKGMNYLED 142
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
RLVHRDL N++ K+TDFG A+ L +++ G + + +
Sbjct: 143 RRLVHRDLAARNVLV----KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-----KWM 193
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
L + + + D+WS GVT++ + T G+ P+
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
VLG+GA V +N + AVK Q H+R RE E+L + + V L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR--VFREVEMLYQCQGHRNVLELI 77
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
E+E R +V E GGS IL E E +V++ + + + L + +
Sbjct: 78 EFFEEEDR-FYLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 136 HRDLKPGNIMKFICDDGSTI--YKLTDF--GAARELEED------QQFMSLYGTEEYLHP 185
HRDLKP NI+ C+ + + K+ DF G+ +L D + ++ G+ EY+ P
Sbjct: 134 HRDLKPENIL---CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
++ E + + DLWS+GV LY + +G PF
Sbjct: 191 EVVEAFSEEASI---YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGE---PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K + VA+KT + + E ++ + H NI++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +IV E GSL + L + + + + + +L + +GMK+L D
Sbjct: 112 EGVVTKS--KPVMIVTEYMENGSLDSFLRKHDAQFTVIQ--LVGMLRGIASGMKYLSDMG 167
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG R LE+D + + Y T P + E
Sbjct: 168 YVHRDLAARNILI----NSNLVCKVSDFGLGRVLEDDPE--AAYTTRGGKIPIRWTSPEA 221
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
RK F + D+WS G+ L+ V + RPY N++ +
Sbjct: 222 IAYRK-----FTSASDVWSYGIVLWEVMSYGE--RPYWEMSNQDVI 260
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V+ GV K VAVKT + M + ++E V+K++KH N+V+LL +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEF-LKEAAVMKEIKHPNLVQLLGVC 97
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
+ IV E G+L + L + N + L + +++ M++L +HR
Sbjct: 98 TLEPPF--YIVTEYMPYGNLLDYLREC-NREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRKP 196
DL N C G + K+ DFG +R + D + + G + + E
Sbjct: 155 DLAARN-----CLVGENHVVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYN-- 206
Query: 197 VGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
TF D+W+ GV L+ +AT + PY G
Sbjct: 207 ---TFSIKSDVWAFGVLLWEIATYGM--SPYPG 234
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K G+ VA+KT + + E ++ + H NI+ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +I+ E GSL L + + + + + +L + +GMK+L D
Sbjct: 75 EGVV--TKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ--LVGMLRGIGSGMKYLSDMS 130
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 131 YVHRDLAARNILV----NSNLVCKVSDFGMSRVLEDDPE--AAYTTRGGKIPIRWTAPEA 184
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
RK F + D+WS G+ ++ V + RPY N++ + I
Sbjct: 185 IAYRK-----FTSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKAI 226
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 36/232 (15%)
Query: 18 LGKGATGAVFQ----GVNKNNGE-PVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + G+ K + VAVK +H + M E +++ + +HENIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNIL--------DDPENTYG---LQEEEFLLVLE 120
LL G +++ E C G L N L DP L + L
Sbjct: 114 NLLG--ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE 180
+ GM L +HRD+ N++ + K+ DFG AR++ D ++
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 181 ---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V + D+WS G+ L+ + + L PY G
Sbjct: 228 LPVKWMAPESIFDCV--------YTVQSDVWSYGILLWEIFS--LGLNPYPG 269
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K G+ VA+KT + + E ++ + H NI+ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +I+ E GSL L + + + + + +L + +GMK+L D
Sbjct: 81 EGVV--TKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ--LVGMLRGIGSGMKYLSDMS 136
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 137 YVHRDLAARNILV----NSNLVCKVSDFGMSRVLEDDPE--AAYTTRGGKIPIRWTAPEA 190
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
RK F + D+WS G+ ++ V + RPY N++ + I
Sbjct: 191 IAYRK-----FTSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKAI 232
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLK-KVKHENIVKLLAI 76
GK G +F + VA+KT + P + R +L+ +++H N+V LL +
Sbjct: 22 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGV 80
Query: 77 EEEQEGRGKVIVMELCTGGSL--FNILDDPENTYG-----------LQEEEFLLVLEHLT 123
+ + ++ C+ G L F ++ P + G L+ +F+ ++ +
Sbjct: 81 VTKDQPLS--MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIA 138
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYL 183
AGM++L + +VH+DL N++ + D + K++D G RE+ + L G
Sbjct: 139 AGMEYLSSHHVVHKDLATRNVLVY---DKLNV-KISDLGLFREVYA-ADYYKLLGNSLLP 193
Query: 184 HPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKK 243
M A++ GK F D+WS GV L+ V + L +PY G N++ + I ++
Sbjct: 194 IRWMAPEAIM---YGK-FSIDSDIWSYGVVLWEVFSYGL--QPYCGYSNQDVVEMIRNRQ 247
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K G+ VA+KT + + E ++ + H NI+ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + + +I+ E GSL L + + + + + +L + +GMK+L D
Sbjct: 96 EGVV--TKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ--LVGMLRGIGSGMKYLSDMS 151
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY---ER 190
VHRDL NI+ + + + K++DFG +R LE+D + + Y T P + E
Sbjct: 152 AVHRDLAARNILV----NSNLVCKVSDFGMSRVLEDDPE--AAYTTRGGKIPIRWTAPEA 205
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
RK F + D+WS G+ ++ V + RPY N++ + I
Sbjct: 206 IAYRK-----FTSASDVWSYGIVMWEVMSYGE--RPYWDMSNQDVIKAI 247
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA- 75
++G G G VF+ ++ +G+ +K ++ RE + L K+ H NIV
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKY-----NNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 76 ---------IEEEQEGRGKV----IVMELCTGGSLFNILDDPENTYGLQEEEFLLV--LE 120
+ R K I ME C G+L + E G + ++ L + E
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI---EKRRGEKLDKVLALELFE 129
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE 180
+T G+ ++ +L++RDLKP NI F+ D + K+ DFG L+ D + GT
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNI--FLVD--TKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 181 EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTL 214
Y+ P+ + +G VDL+++G+ L
Sbjct: 186 RYMSPEQIS--------SQDYGKEVDLYALGLIL 211
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G +K + E VAVK + + +V+ RE + ++H NIV+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKID-ENVK-REIINHRSLRHPNIVRFKEVI 84
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
IVME +GG LF + N E+E + L +G+ + ++ HR
Sbjct: 85 LTPTHLA--IVMEYASGGELFERIC---NAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
Query: 138 DLKPGNIMKFICDDGSTI--YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
DLK N + DGS K+ FG ++ Q GT Y+ P++ +L+K
Sbjct: 140 DLKLENTLL----DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEV----LLKK 191
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G D+WS GVTLY + G PF
Sbjct: 192 ---EYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V G K G+ VA+KT + + E ++ + H N++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
+ + +I+ E GSL + L + + + + + +L + AGMK+L D
Sbjct: 74 EGVVTKSTP--VMIITEFMENGSLDSFLRQNDGQFTVIQ--LVGMLRGIAAGMKYLADMN 129
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ---FMSLYGTEEYLHPDMYER 190
VHR L NI+ + + + K++DFG +R LE+D + S G + + E
Sbjct: 130 YVHRALAARNILV----NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
RK F + D+WS G+ ++ V + RPY N++ + I
Sbjct: 186 IQYRK-----FTSASDVWSYGIVMWEVMSYGE--RPYWDMTNQDVINAI 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
S LG G G V + ++ +G +A K + + +RE +VL + IV
Sbjct: 22 SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 76 IEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD-NR 133
G++ I ME GGSL +L + + + EE V + G+ +LR+ ++
Sbjct: 82 AFYSD---GEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ + G KL DFG + +L D S GT Y+ P+ +
Sbjct: 136 IMHRDVKPSNIL--VNSRGEI--KLCDFGVSGQLI-DSMANSFVGTRSYMAPERLQ---- 186
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
G + D+WS+G++L +A G P P
Sbjct: 187 ----GTHYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 29/229 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G V G N + VA+KT + M D + E EV+ K+ H +V+L +
Sbjct: 15 IGSGQFGLVHLGYWLNK-DKVAIKTIRE-GAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 71
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
EQ +V E G L + L + E L + + GM +L + ++HR
Sbjct: 72 LEQAP--ICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVL 193
DL N C G + K++DFG R + +D Q+ S GT+ ++ P+++ +
Sbjct: 128 DLAARN-----CLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFS-- 179
Query: 194 RKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETMYYITT 241
+ + D+WS GV ++ V + G + PY R N E + I+T
Sbjct: 180 ------RYSSKSDVWSFGVLMWEVFSEGKI---PYENRSNSEVVEDIST 219
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+G G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D K+ DFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 36/221 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHD----VQMREFEVLKKVKHENIVKL 73
LG+G V++ +KN + VA+K D +RE ++L+++ H NI+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTA-------GM 126
L + G I + +F+ ++ +++ +L H+ A G+
Sbjct: 78 L----DAFGHKSNISL-------VFDFMETDLEVI-IKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMSLYGTEEYLHP 185
++L + ++HRDLKP N++ D + + KL DFG A+ ++ + T Y P
Sbjct: 126 EYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 186 DMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
++ A + +G VD+W++G L + +PF P
Sbjct: 182 ELLFGA-------RMYGVGVDMWAVGCILAELLL-RVPFLP 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEP---VAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKL 73
V+G G G V +G K G+ VA+KT R + E ++ + +H NI++L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 74 LAIEEEQEGRGKVIVMELCTGGSL--FNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
+ +I+ E G+L F L+D + T + + +L + +GM++L +
Sbjct: 83 EGVVTNS--MPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAE 136
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE---DQQFMSLYGTEEYLHPDMY 188
VHRDL NI+ + + + K++DFG +R LEE D S G + +
Sbjct: 137 MSYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
E RK F + D WS G+ ++ V + RPY N++ + I
Sbjct: 193 EAIAFRK-----FTSASDAWSYGIVMWEVMS--FGERPYWDMSNQDVINAI 236
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 23/232 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G G VF V+ + + VA+K ++ P V+ +RE ++++++ H+NIVK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-------LQEEEFLLVLEHLTAGMKH 128
I + V L S++ + + E L EE L + L G+K+
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKY 135
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRDLKP N+ FI + + K+ DFG AR + D + E L Y
Sbjct: 136 IHSANVLHRDLKPANL--FINTE-DLVLKIGDFGLARIM--DPHYSHKGHLSEGLVTKWY 190
Query: 189 ERA-VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+L P + +D+W+ G + TG F G E M I
Sbjct: 191 RSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKTLF---AGAHELEQMQLI 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+G G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D K+ DFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKL- 73
V+G+GA V K G+ A+K N+ ++ +V E +VL I +L
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG--LQEEEFLLVLEHLTAGMKHLRD 131
A ++E +VME GG L +L + +G + E L + + +
Sbjct: 128 FAFQDENY---LYLVMEYYVGGDLLTLL----SKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY--GTEEYLHPDMYE 189
VHRD+KP NI+ C +L DFG+ +L D SL GT +YL P++ +
Sbjct: 181 LGYVHRDIKPDNILLDRCGH----IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
AV P ++G D W++GV Y + G PF
Sbjct: 237 -AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 24/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMRPHDVQMR---EFEVLKKVK---- 66
+LGKG G VF G + VA+K N++ P + E +L KV
Sbjct: 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96
Query: 67 HENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGM 126
H +++LL E QEG V+ L LF+ + + L E + A +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPL-PAQDLFDYITE---KGPLGEGPSRCFFGQVVAAI 152
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
+H +VHRD+K NI+ D KL DFG+ L D+ + GT Y P+
Sbjct: 153 QHCHSRGVVHRDIKDENIL---IDLRRGCAKLIDFGSG-ALLHDEPYTDFDGTRVYSPPE 208
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
R ATV WS+G+ LY + G++PF
Sbjct: 209 WISRHQYH-----ALPATV--WSLGILLYDMVCGDIPF 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
+G G+ G V + G A+K ++ ++ ++ + E +L+ V +VKL
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +VME GG +F+ L E + ++L L+
Sbjct: 109 --SFKDNSNLYMVMEYMPGGDMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D K+ DFG A+ ++ + L GT EYL P++
Sbjct: 164 YRDLKPENLLI----DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEII------- 210
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 211 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLLA 75
LG G+ G V +K G A+K ++ ++ ++ + E + + V +VKL
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
++ +V+E GG +F+ L E + ++L L+
Sbjct: 110 --SFKDNSNLYMVLEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVLRK 195
+RDLKP N++ D K+ DFG A+ ++ + L GT EYL P++
Sbjct: 165 YRDLKPENLLI----DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEII------- 211
Query: 196 PVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ K + VD W++GV +Y +A G PF
Sbjct: 212 -LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 26/226 (11%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK-TFNQLSHMRPHDV---------QMREFEV 61
+ + G+ GAV GV+ + G PVA+K FN +S R ++ +RE +
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 62 LKKVKHENIVKL--LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVL 119
L H NI+ L + + E+ K+ ++ L ++ D Q ++ +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY- 141
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
H+ G+ L + +VHRDL PGNI+ + D+ + DF ARE D
Sbjct: 142 -HILLGLHVLHEAGVVHRDLHPGNIL--LADNNDI--TICDFNLAREDTADANKTHYVTH 196
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
Y P++ + K F VD+WS G + + FR
Sbjct: 197 RWYRAPELVMQF-------KGFTKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 29/229 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G V G N + VA+KT + M D + E EV+ K+ H +V+L +
Sbjct: 13 IGSGQFGLVHLGYWLNK-DKVAIKTIRE-GAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 69
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
EQ +V E G L + L + E L + + GM +L + ++HR
Sbjct: 70 LEQAP--ICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 138 DLKPGNIMKFICDDG-STIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVL 193
DL N C G + + K++DFG R + +D Q+ S GT+ ++ P+++ +
Sbjct: 126 DLAARN-----CLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFS-- 177
Query: 194 RKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETMYYITT 241
+ + D+WS GV ++ V + G + PY R N E + I+T
Sbjct: 178 ------RYSSKSDVWSFGVLMWEVFSEGKI---PYENRSNSEVVEDIST 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 12 WCTTSV-LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENI 70
W T + LG+G+ G V + +K G AVK +R + E + I
Sbjct: 75 WATHQLRLGRGSFGEVHRMEDKQTGFQCAVKK------VRLEVFRAEELMACAGLTSPRI 128
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR 130
V L +EG I MEL GGSL ++ + L E+ L L G+++L
Sbjct: 129 VPLYGAV--REGPWVNIFMELLEGGSLGQLVKE---QGCLPEDRALYYLGQALEGLEYLH 183
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY------GTEEYLH 184
R++H D+K N++ + DGS L DFG A L+ D L GTE ++
Sbjct: 184 SRRILHGDVKADNVL--LSSDGSHA-ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMA 240
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
P++ +G++ A VD+WS + H+ G P+
Sbjct: 241 PEVV--------LGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ-MREFEVLKKVK---HENIVKL 73
+G GA G V++ + ++G VA+K+ + + +RE +L++++ H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY-------GLQEEEFLLVLEHLTAGM 126
+ + ++ V +F +D TY GL E ++ G+
Sbjct: 72 MDVCATSRTDREIKVT------LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
L N +VHRDLKP NI+ G T+ KL DFG AR + T Y P+
Sbjct: 126 DFLHANCIVHRDLKPENIL---VTSGGTV-KLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 187 MYERAVLRKPVGKTFGATVDLWSIG 211
+ + T+ VD+WS+G
Sbjct: 182 VL--------LQSTYATPVDMWSVG 198
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 29/229 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G V G N + VA+KT + M D + E EV+ K+ H +V+L +
Sbjct: 15 IGSGQFGLVHLGYWLNK-DKVAIKTIRE-GAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 71
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
EQ +V E G L + L + E L + + GM +L + ++HR
Sbjct: 72 LEQAP--ICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 138 DLKPGNIMKFICDDG-STIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVL 193
DL N C G + + K++DFG R + +D Q+ S GT+ ++ P+++ +
Sbjct: 128 DLAARN-----CLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFS-- 179
Query: 194 RKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETMYYITT 241
+ + D+WS GV ++ V + G + PY R N E + I+T
Sbjct: 180 ------RYSSKSDVWSFGVLMWEVFSEGKI---PYENRSNSEVVEDIST 219
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ +V E + L + +D T G+ L L G+ +R++H
Sbjct: 73 IHTENKL--YLVFEFLSM-DLKDFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 129 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 181 ---KYYSTAVDIWSLGCIFAEMVT 201
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 26/226 (11%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVK-TFNQLSHMRPHDV---------QMREFEV 61
+ + G+ GAV GV+ + G PVA+K FN +S R ++ +RE +
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 62 LKKVKHENIVKL--LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVL 119
L H NI+ L + + E+ K+ ++ L ++ D Q ++ +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY- 141
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
H+ G+ L + +VHRDL PGNI+ + D+ + DF ARE D
Sbjct: 142 -HILLGLHVLHEAGVVHRDLHPGNIL--LADNNDI--TICDFNLAREDTADANKTHYVTH 196
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
Y P++ + K F VD+WS G + + FR
Sbjct: 197 RWYRAPELVMQF-------KGFTKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ +V E + L + +D T G+ L L G+ +R++H
Sbjct: 74 IHTENKL--YLVFEFLSM-DLKDFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 130 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 182 ---KYYSTAVDIWSLGCIFAEMVT 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 29/229 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G V G N + VA+KT + M D + E EV+ K+ H +V+L +
Sbjct: 18 IGSGQFGLVHLGYWLNK-DKVAIKTIRE-GAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 74
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
EQ +V E G L + L + E L + + GM +L + ++HR
Sbjct: 75 LEQAP--ICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMAYLEEACVIHR 130
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVL 193
DL N C G + K++DFG R + +D Q+ S GT+ ++ P+++ +
Sbjct: 131 DLAARN-----CLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFS-- 182
Query: 194 RKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETMYYITT 241
+ + D+WS GV ++ V + G + PY R N E + I+T
Sbjct: 183 ------RYSSKSDVWSFGVLMWEVFSEGKI---PYENRSNSEVVEDIST 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 29/229 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G V G N + VA+KT + S D + E EV+ K+ H +V+L +
Sbjct: 35 IGSGQFGLVHLGYWLNK-DKVAIKTIKEGS--MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
EQ +V E G L + L + E L + + GM +L + ++HR
Sbjct: 92 LEQAP--ICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMAYLEEACVIHR 147
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVL 193
DL N C G + K++DFG R + +D Q+ S GT+ ++ P+++ +
Sbjct: 148 DLAARN-----CLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFS-- 199
Query: 194 RKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETMYYITT 241
+ + D+WS GV ++ V + G + PY R N E + I+T
Sbjct: 200 ------RYSSKSDVWSFGVLMWEVFSEGKI---PYENRSNSEVVEDIST 239
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ-MREFEVLKKVK---HENIVKL 73
+G GA G V++ + ++G VA+K+ + + +RE +L++++ H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY-------GLQEEEFLLVLEHLTAGM 126
+ + ++ V +F +D TY GL E ++ G+
Sbjct: 72 MDVCATSRTDREIKVT------LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
L N +VHRDLKP NI+ G T+ KL DFG AR + T Y P+
Sbjct: 126 DFLHANCIVHRDLKPENIL---VTSGGTV-KLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 187 MYERAVLRKPVGKTFGATVDLWSIG 211
+ + T+ VD+WS+G
Sbjct: 182 VL--------LQSTYATPVDMWSVG 198
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 18 LGKGATGAVFQGVN-KNNGEPVAVKTFN-QLSHMRPHDVQMREFEVLKKVK---HENIVK 72
+G+GA G VF+ + KN G VA+K Q +RE VL+ ++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 73 LLAI--EEEQEGRGKVIVMELCTGGSLFNILDD-PENTYGLQEEEFLLVLEHLTAGMKHL 129
L + + K+ ++ L LD PE G+ E ++ L G+ L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP--GVPTETIKDMMFQLLRGLDFL 136
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
+R+VHRDLKP NI+ + G KL DFG AR S+ T Y P++
Sbjct: 137 HSHRVVHRDLKPQNIL--VTSSGQI--KLADFGLARIYSFQMALTSVVVTLWYRAPEVL- 191
Query: 190 RAVLRKPVGKTFGATVDLWSIG 211
+ ++ VDLWS+G
Sbjct: 192 -------LQSSYATPVDLWSVG 206
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 29/229 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
+G G G V G N + VA+KT + M D + E EV+ K+ H +V+L +
Sbjct: 16 IGSGQFGLVHLGYWLNK-DKVAIKTIRE-GAMSEEDF-IEEAEVMMKLSHPKLVQLYGVC 72
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
EQ +V E G L + L + E L + + GM +L + ++HR
Sbjct: 73 LEQAP--ICLVTEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMAYLEEACVIHR 128
Query: 138 DLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVL 193
DL N C G + K++DFG R + +D Q+ S GT+ ++ P+++ +
Sbjct: 129 DLAARN-----CLVGENQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFS-- 180
Query: 194 RKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRRNKETMYYITT 241
+ + D+WS GV ++ V + G + PY R N E + I+T
Sbjct: 181 ------RYSSKSDVWSFGVLMWEVFSEGKI---PYENRSNSEVVEDIST 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 18 LGKGATGAVFQGVN-KNNGEPVAVKTFNQLSHMRPHDVQ-MREFEVLKKVK---HENIVK 72
+G+GA G VF+ + KN G VA+K + + +RE VL+ ++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 73 LLAI--EEEQEGRGKVIVMELCTGGSLFNILDD-PENTYGLQEEEFLLVLEHLTAGMKHL 129
L + + K+ ++ L LD PE G+ E ++ L G+ L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP--GVPTETIKDMMFQLLRGLDFL 136
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
+R+VHRDLKP NI+ + G KL DFG AR S+ T Y P++
Sbjct: 137 HSHRVVHRDLKPQNIL--VTSSGQI--KLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 190 RAVLRKPVGKTFGATVDLWSIG 211
++ ++ VDLWS+G
Sbjct: 193 QS--------SYATPVDLWSVG 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
VLGKG+ G V K E AVK + ++ DV+ M E VL + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ R VME GG L + + +E + + G+ L+ +
Sbjct: 408 HSCFQTMDR-LYFVMEYVNGGDLMYHI---QQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
++RDLK N+M D K+ DFG +E D + GT +Y+ P++ +
Sbjct: 464 IYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI----IA 515
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+P GK+ VD W+ GV LY + G PF
Sbjct: 516 YQPYGKS----VDWWAFGVLLYEMLAGQAPF 542
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
VLGKG+ G V K E A+K + ++ DV+ M E VL + + L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ R VME GG L + + +E + + ++ G+ L +
Sbjct: 86 HSCFQTVDR-LYFVMEYVNGGDLMYHI---QQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAVL 193
++RDLK N+M D K+ DFG +E + + GT +Y+ P++ +
Sbjct: 142 IYRDLKLDNVML----DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI----IA 193
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+P GK+ VD W+ GV LY + G PF
Sbjct: 194 YQPYGKS----VDWWAYGVLLYEMLAGQPPF 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 18 LGKGATGAVFQGVN-KNNGEPVAVKTFNQLSHMRPHDVQ-MREFEVLKKVK---HENIVK 72
+G+GA G VF+ + KN G VA+K + + +RE VL+ ++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 73 LLAI--EEEQEGRGKVIVMELCTGGSLFNILDD-PENTYGLQEEEFLLVLEHLTAGMKHL 129
L + + K+ ++ L LD PE G+ E ++ L G+ L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP--GVPTETIKDMMFQLLRGLDFL 136
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
+R+VHRDLKP NI+ + G KL DFG AR S+ T Y P++
Sbjct: 137 HSHRVVHRDLKPQNIL--VTSSGQI--KLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 190 RAVLRKPVGKTFGATVDLWSIG 211
++ ++ VDLWS+G
Sbjct: 193 QS--------SYATPVDLWSVG 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAIE 77
LG G G V G K + VAVK + S D +E + + K+ H +VK +
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-VAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 78 EEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHR 137
++ IV E + G L N L + GL+ + L + + GM L ++ +HR
Sbjct: 73 SKE--YPIYIVTEYISNGCLLNYLRS--HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 138 DLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE---EYLHPDMYERAVLR 194
DL N + D K++DFG R + +D Q++S GT+ ++ P+++
Sbjct: 129 DLAARNCLV----DRDLCVKVSDFGMTRYVLDD-QYVSSVGTKFPVKWSAPEVFHYF--- 180
Query: 195 KPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPY 227
+ + D+W+ G+ ++ V + G +P+ Y
Sbjct: 181 -----KYSSKSDVWAFGILMWEVFSLGKMPYDLY 209
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 36/232 (15%)
Query: 18 LGKGATGAVFQ----GVNKNNGE-PVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + G+ K + VAVK +H + M E +++ + +HENIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNIL--------DDPENTYG---LQEEEFLLVLE 120
LL G +++ E C G L N L DP + L
Sbjct: 114 NLLG--ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTE 180
+ GM L +HRD+ N++ + K+ DFG AR++ D ++
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 181 ---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V + D+WS G+ L+ + + L PY G
Sbjct: 228 LPVKWMAPESIFDCV--------YTVQSDVWSYGILLWEIFS--LGLNPYPG 269
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ +V E + L +D T G+ L L G+ +R++H
Sbjct: 72 IHTENKL--YLVFEFLSM-DLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 128 RDLKPENLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 180 ---KYYSTAVDIWSLGCIFAEMVT 200
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 19/211 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIVKLL 74
VLGKG+ G V K E AVK + ++ DV+ M E VL + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ R VME GG L + + +E + + G+ L+ +
Sbjct: 87 HSCFQTMDR-LYFVMEYVNGGDLMYHI---QQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLY-GTEEYLHPDMYERAVL 193
++RDLK N+M D K+ DFG +E D + GT +Y+ P++ +
Sbjct: 143 IYRDLKLDNVML----DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI----IA 194
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+P GK+ VD W+ GV LY + G PF
Sbjct: 195 YQPYGKS----VDWWAFGVLLYEMLAGQAPF 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ +V E + L +D T G+ L L G+ +R++H
Sbjct: 74 IHTENKL--YLVFEFLSM-DLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 130 RDLKPENLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 182 ---KYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLV---LEHLTAGMKHLRDNR 133
+ +V E L L D + L L+ L L G+ +R
Sbjct: 71 IHTENKL--YLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAV 192
++HRDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 124 VLHRDLKPENLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC- 178
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ------KYYSTAVDIWSLGCIFAEMVT 199
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 42/236 (17%)
Query: 18 LGKGATGAVFQ----GVNKNNGE-PVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + G+ K + VAVK +H + M E +++ + +HENIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNIL---------------DDPENTYGLQEEEFL 116
LL G +++ E C G L N L +PE L + L
Sbjct: 114 NLLG--ACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ--LSSRDLL 169
Query: 117 LVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
+ GM L +HRD+ N++ + K+ DFG AR++ D ++
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 177 YGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V + D+WS G+ L+ + + L PY G
Sbjct: 226 GNARLPVKWMAPESIFDCV--------YTVQSDVWSYGILLWEIFS--LGLNPYPG 271
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ---KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+ V+G G+ G VFQ + E VA+K Q + RE ++++ VKH N+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFK-----NRELQIMRIVKHPNVV 95
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE----HLTAGMK 127
L A + + + L + + L++ +L+++ L +
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
++ + HRD+KP N++ D S + KL DFG+A+ L + +S + Y P++
Sbjct: 156 YIHSIGICHRDIKPQNLL---LDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPEL 212
Query: 188 YERAVLRKPVGKTFGAT-----VDLWSIGVTLYHVATG 220
FGAT +D+WS G + + G
Sbjct: 213 ------------IFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLSFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ---KYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP--DMYERAVLR 194
RDLKP N++ I +G+ KL DFG AR Y H ++ RA
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFG--------VPVRTYXHEVVTLWYRAPEI 174
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ---KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 72 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 128 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 180 ---KYYSTAVDIWSLGCIFAEMVT 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 70 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 126 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 177
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 178 ---KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKT--FNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
+G+G G V++ NK GE VA+K + + P +RE +LK++ H NIVKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP-STAIREISLLKELNHPNIVKLLD 68
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + K+ ++ L +D T G+ L L G+ +R++
Sbjct: 69 VIHTE---NKLYLVFEHVHQDLKTFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 125 HRDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC--- 177
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 178 ----KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKT--FNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
+G+G G VF+ N+ E VA+K + P +RE +LK++KH+NIV+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 76 IEEEQEGRGKVIVMELC----------TGGSLFNILDDPENTYGLQEEEFLLVLEHLTAG 125
+ + +V E C G L DPE + FL L G
Sbjct: 69 VLHSD--KKLTLVFEFCDQDLKKYFDSCNGDL-----DPEIV-----KSFLF---QLLKG 113
Query: 126 MKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLH 184
+ ++HRDLKP N++ I +G KL DFG AR + + + T Y
Sbjct: 114 LGFCHSRNVLHRDLKPQNLL--INRNGEL--KLADFGLARAFGIPVRCYSAEVVTLWYRP 169
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
PD+ A K + ++D+WS G +A P P
Sbjct: 170 PDVLFGA-------KLYSTSIDMWSAGCIFAELANAARPLFP 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ---KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 70 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 126 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 177
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 178 ---KYYSTAVDIWSLGCIFAEMVT 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 70 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 126 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 177
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 178 ---KYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 73 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 129 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 181 ---KYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ---KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 49/227 (21%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIV----- 71
++G G G VF+ ++ +G+ ++ ++ RE + L K+ H NIV
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKY-----NNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 72 -------------KLLAIEEEQE-----GRGKV----IVMELCTGGSLFNILDDPENTYG 109
L + + + E R K I ME C G+L + E G
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI---EKRRG 130
Query: 110 LQEEEFLLV--LEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL 167
+ ++ L + E +T G+ ++ +L+HRDLKP NI F+ D + K+ DFG L
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI--FLVD--TKQVKIGDFGLVTSL 186
Query: 168 EEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTL 214
+ D + GT Y+ P+ + +G VDL+++G+ L
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQIS--------SQDYGKEVDLYALGLIL 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 45/241 (18%)
Query: 18 LGKGATGAVFQ----GVNKNNGE-PVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + G+ K + VAVK +H + M E +++ + +HENIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNIL---------------DDPE-----NTYGLQ 111
LL G +++ E C G L N L DPE + L+
Sbjct: 99 NLLG--ACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 112 EEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ 171
+ L + GM L +HRD+ N++ + K+ DFG AR++ D
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL----TNGHVAKIGDFGLARDIMNDS 212
Query: 172 QFMSLYGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYG 228
++ +++ P+ V + D+WS G+ L+ + + L PY
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCV--------YTVQSDVWSYGILLWEIFS--LGLNPYP 262
Query: 229 G 229
G
Sbjct: 263 G 263
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 74 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 130 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 182 ---KYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 73 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 129 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 181 ---KYYSTAVDIWSLGCIFAEMVT 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ---KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 70 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 126 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 177
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 178 ---KYYSTAVDIWSLGCIFAEMVT 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 74 IHTEN---KLYLVFEHVDQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 130 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 182 ---KYYSTAVDIWSLGCIFAEMVT 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 72 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 128 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 180 ---KYYSTAVDIWSLGCIFAEMVT 200
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF---NQLSHMRPHDVQ-MREFEVLKKVK---HENI 70
+G GA G V++ + ++G VA+K+ N + +RE +L++++ H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY-------GLQEEEFLLVLEHLT 123
V+L+ + ++ V +F +D TY GL E ++
Sbjct: 77 VRLMDVCATSRTDREIKVT------LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 124 AGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYL 183
G+ L N +VHRDLKP NI+ G T+ KL DFG AR + T Y
Sbjct: 131 RGLDFLHANCIVHRDLKPENIL---VTSGGTV-KLADFGLARIYSYQMALTPVVVTLWYR 186
Query: 184 HPDMYERAVLRKPVGKTFGATVDLWSIG 211
P++ ++ T+ VD+WS+G
Sbjct: 187 APEVLLQS--------TYATPVDMWSVG 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 72 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 128 RDLKPENLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 179
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 180 ---KYYSTAVDIWSLGCIFAEMVT 200
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ-MREFEVLKKVK---HENIVKL 73
+G GA G V++ + ++G VA+K+ + + +RE +L++++ H N+V+L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY-------GLQEEEFLLVLEHLTAGM 126
+ + ++ V +F +D TY GL E ++ G+
Sbjct: 72 MDVCATSRTDREIKVT------LVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
L N +VHRDLKP NI+ G T+ KL DFG AR + T Y P+
Sbjct: 126 DFLHANCIVHRDLKPENIL---VTSGGTV-KLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 187 MYERAVLRKPVGKTFGATVDLWSIG 211
+ + T+ VD+WS+G
Sbjct: 182 VL--------LQSTYATPVDMWSVG 198
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 74 IHTEN---KLYLVFEFLHQDLKTFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 130 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 182 ---KYYSTAVDIWSLGCIFAEMVT 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 75 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 131 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 183 ---KYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 73 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 129 RDLKPENLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 180
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 181 ---KYYSTAVDIWSLGCIFAEMVT 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP--DMYERAVLR 194
RDLKP N++ I +G+ KL DFG AR Y H ++ RA
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFG--------VPVRTYTHEVVTLWYRAPEI 174
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQL-SHMRPHDVQMREFEVLKKVKHENIVKL-- 73
++G+G+ G V+ +KN + VA+K N++ + +RE +L ++K + I++L
Sbjct: 35 LIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHD 94
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
L I E+ ++ ++ L + P L E+ +L +L G K + ++
Sbjct: 95 LIIPEDLLKFDELYIVLEIADSDLKKLFKTP---IFLTEQHVKTILYNLLLGEKFIHESG 151
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQ 171
++HRDLKP N + + D S K+ DFG AR + D+
Sbjct: 152 IIHRDLKPANCL--LNQDCSV--KICDFGLARTINSDK 185
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 74 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 130 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC---- 181
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 182 ---KYYSTAVDIWSLGCIFAEMVT 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKT--FNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
+G+G G V++ NK GE VA+K + + P +RE +LK++ H NIVKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP-STAIREISLLKELNHPNIVKLLD 70
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ + K+ ++ L +D T G+ L L G+ +R++
Sbjct: 71 VIHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 136 HRDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLR 194
HRDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 HRDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC--- 179
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 180 ----KYYSTAVDIWSLGCIFAEMVT 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 75 IHTE---NKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 130
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 131 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 182
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 183 ---KYYSTAVDIWSLGCIFAEMVT 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 78 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 134 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 185
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 186 ---KYYSTAVDIWSLGCIFAEMVT 206
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 70 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 126 CHNXGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 181
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 182 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 47/243 (19%)
Query: 17 VLGKGATGAVFQ----GVNKNNGE-PVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENI 70
VLG GA G V G++K VAVK + + + M E +++ ++ HENI
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 71 VKLLAIEEEQEGRGKV-IVMELCTGGSLFNILD-----------DPENTYGLQEEEFLLV 118
V LL G + ++ E C G L N L + EN L+EEE L V
Sbjct: 112 VNLLGA---CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 119 LE---------HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE 169
L + GM+ L VHRDL N++ G + K+ DFG AR++
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL---VTHGKVV-KICDFGLARDIMS 224
Query: 170 DQQFMSLYGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
D ++ +++ P+ + + D+WS G+ L+ + + L P
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGI--------YTIKSDVWSYGILLWEIFS--LGVNP 274
Query: 227 YGG 229
Y G
Sbjct: 275 YPG 277
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 42 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 102 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 158 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 213
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 214 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+K + +RE +LK++ H NIVKLL +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 78 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 133
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHP--DMYERAVLR 194
RDLKP N++ I +G+ KL DFG AR Y H ++ RA
Sbjct: 134 RDLKPQNLL--INTEGAI--KLADFGLARAFG--------VPVRTYTHEVVTLWYRAPEI 181
Query: 195 KPVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 70 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 126 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 181
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 182 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 14 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 74 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 130 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 185
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 186 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 44/232 (18%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+GA G VF + + + VAVK + S D Q RE E+L ++H++IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIVR 84
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL--------------DDPENTYGLQEEEFLLV 118
+ EGR ++V E G L L D GL + L V
Sbjct: 85 FFGVC--TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ--LLAV 140
Query: 119 LEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDG-STIYKLTDFGAARELEEDQQFMSLY 177
+ AGM +L VHRDL N C G + K+ DFG +R+ +Y
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRN-----CLVGQGLVVKIGDFGMSRD---------IY 186
Query: 178 GTEEYLHPDMYERAVLRKP----VGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
T+ Y + P + + F D+WS GV L+ + T G P+
Sbjct: 187 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 238
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 108/288 (37%), Gaps = 69/288 (23%)
Query: 18 LGKGATGAVFQGVNKN--NGEPVAVKTFNQLSHMRPHDVQM---REFEVLKKVKHENIVK 72
+G+GA G VFQ EP + L D+Q RE ++ + + NIVK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDD--PENTYGLQEEEF--------------- 115
LL + G+ ++ E G L L P L +
Sbjct: 115 LLGVC--AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 116 ----LLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDG-STIYKLTDFGAARELEED 170
L + + AGM +L + + VHRDL N C G + + K+ DFG +R +
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRN-----CLVGENMVVKIADFGLSRNIY-- 225
Query: 171 QQFMSLYGTEEYLHPDMYERAVLR-KPVGKTF----GATVDLWSIGVTLYHVATGNLPFR 225
+ +Y D + +R P F D+W+ GV L+ + + L +
Sbjct: 226 --------SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL--Q 275
Query: 226 PYGGRRNKETMYYITTKKASGVISGTQTSENGEIDWCTDLPNNCQLSL 273
PY G ++E +YY+ +G I C P NC L L
Sbjct: 276 PYYGMAHEEVIYYV---------------RDGNILAC---PENCPLEL 305
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 15 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 75 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 131 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 186
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 187 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HEN 69
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 104 VIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM-- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 160 HNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 216 YHR---------YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HEN 69
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 118 VIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM-- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 174 HNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 230 YHR---------YHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 70 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 126 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 181
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 182 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 29/237 (12%)
Query: 17 VLGKGATGAVFQG-VNKNNGEP--VAVKTFN-QLSHMRPHDVQMREFEVLKKVKHENIVK 72
+LG+G G+V +G + + +G VAVKT S R + + E +K H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 73 LLAIEEEQEGRG---KVIVMELCTGGSLFNILDDPENTYG---LQEEEFLLVLEHLTAGM 126
LL + E +G ++++ G L L G + + L + + GM
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
++L + +HRDL N M + DD + + DFG ++++ Y + Y
Sbjct: 161 EYLSNRNFLHRDLAARNCM--LRDDMTVC--VADFGLSKKI---------YSGDYYRQGR 207
Query: 187 MYERAV----LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ + V + + + + D+W+ GVT++ +AT + PY G +N E Y+
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGM--TPYPGVQNHEMYDYL 262
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 12 WCTTSVLGKGATGAVFQGVNKNNGEPVAVKTFNQL-SHMRPHDVQMREFEVLKKVKHENI 70
+ ++G+G+ G V+ +KN + VA+K N++ + +RE +L ++K + I
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 71 VKL--LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
++L L I ++ ++ ++ L + P L EE +L +L G
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTP---IFLTEEHIKTILYNLLLGENF 144
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++ ++HRDLKP N + + D S K+ DFG AR + ++ + EE P +
Sbjct: 145 IHESGIIHRDLKPANCL--LNQDCSV--KVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 189 ERAV------------LRKP----VGKTFGATVDLWSIG 211
+ + R P + + + ++D+WS G
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG 239
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 30 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 90 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 146 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 201
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 202 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 42 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 102 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 158 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 213
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 214 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 43 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 103 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 159 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 214
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 215 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 29 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 89 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 145 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 200
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 201 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 13 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 72
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 73 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 129 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 184
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 185 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 213
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HEN 69
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 104 VIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM-- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 160 HNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 216 YHR---------YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 15 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 74
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 75 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 131 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 186
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 187 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 43 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 102
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 103 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 159 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 214
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 215 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 42 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 102 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 158 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 213
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 214 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HEN 69
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHL 129
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 76 VIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 132 HNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 188 YH-------RYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 29 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 88
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 89 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 145 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 200
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 201 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 42 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 101
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 102 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 158 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 213
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 214 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 44/232 (18%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+GA G VF + + + VAVK + S D Q RE E+L ++H++IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIVR 78
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL--------------DDPENTYGLQEEEFLLV 118
+ EGR ++V E G L L D GL + L V
Sbjct: 79 FFGVC--TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ--LLAV 134
Query: 119 LEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDG-STIYKLTDFGAARELEEDQQFMSLY 177
+ AGM +L VHRDL N C G + K+ DFG +R+ +Y
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRN-----CLVGQGLVVKIGDFGMSRD---------IY 180
Query: 178 GTEEYLHPDMYERAVLRKP----VGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
T+ Y + P + + F D+WS GV L+ + T G P+
Sbjct: 181 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 232
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 57 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 116
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 117 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 173 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 228
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 229 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 30 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 90 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 146 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 201
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 202 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 30 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 89
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 90 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 146 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 201
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 202 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 14 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 73
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 74 GVIRLLDWFE----RPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 130 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 185
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 186 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKT--FNQLSHMRPHDVQMREFEVLKKVKHENIVKLLA 75
+G+G G VF+ N+ E VA+K + P +RE +LK++KH+NIV+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKNIVRLHD 68
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILD------DPENTYGLQEEEFLLVLEHLTAGMKHL 129
+ + +V E C L D DPE + FL L G+
Sbjct: 69 VLHSD--KKLTLVFEFCD-QDLKKYFDSCNGDLDPEIV-----KSFLF---QLLKGLGFC 117
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMY 188
++HRDLKP N++ I +G KL +FG AR + + + T Y PD+
Sbjct: 118 HSRNVLHRDLKPQNLL--INRNGEL--KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
A K + ++D+WS G +A P P
Sbjct: 174 FGA-------KLYSTSIDMWSAGCIFAELANAGRPLFP 204
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 62 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 121
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 122 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 178 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 233
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 234 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + + + VAVK +H+ + M E +VL + H NIV
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE----------- 120
LL G +++ E C G L N L +++ + ++ +
Sbjct: 91 NLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 121 ----HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
+ GM L +HRDL NI+ I K+ DFG AR+++ D ++
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRITKICDFGLARDIKNDSNYVVK 204
Query: 177 YGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V TF + D+WS G+ L+ + + L PY G
Sbjct: 205 GNARLPVKWMAPESIFNCVY------TFES--DVWSYGIFLWELFS--LGSSPYPG 250
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 95/230 (41%), Gaps = 42/230 (18%)
Query: 18 LGKGATGAVFQGVNKN-----NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+GA G VF N + VAVKT S D RE E+L ++HE+IVK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH-REAELLTNLQHEHIVK 79
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL------------DDPENTYGLQEEEFLLVLE 120
+ EG ++V E G L L +P L + + L + +
Sbjct: 80 FYGVC--VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE--LTQSQMLHIAQ 135
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYGT 179
+ AGM +L VHRDL N C G + K+ DFG +R+ +Y T
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRN-----CLVGENLLVKIGDFGMSRD---------VYST 181
Query: 180 EEYLHPDMYERAVLRKP----VGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+ Y + P + + F D+WS+GV L+ + T G P+
Sbjct: 182 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + + + VAVK +H+ + M E +VL + H NIV
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE----------- 120
LL G +++ E C G L N L +++ + ++ +
Sbjct: 107 NLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 121 ----HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
+ GM L +HRDL NI+ I K+ DFG AR+++ D ++
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRITKICDFGLARDIKNDSNYVVK 220
Query: 177 YGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V TF + D+WS G+ L+ + + L PY G
Sbjct: 221 GNARLPVKWMAPESIFNCVY------TFES--DVWSYGIFLWELFS--LGSSPYPG 266
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREF----EVLKKVKHENIVKL 73
LG G G V+ N VAVKT M+P + + F V+K ++H+ +VKL
Sbjct: 190 LGAGQFGEVWMATY-NKHTKVAVKT------MKPGSMSVEAFLAEANVMKTLQHDKLVKL 242
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
A+ ++ I+ E GSL + L E + + + + GM +
Sbjct: 243 HAVVTKEP---IYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+HRDL+ NI+ S + K+ DFG AR +F + E ++
Sbjct: 299 YIHRDLRAANILV----SASLVCKIADFGLAR---VGAKFPIKWTAPEAIN--------- 342
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVAT-GNLPFRPYGGRRNKETM 236
+F D+WS G+ L + T G + PY G N E +
Sbjct: 343 ----FGSFTIKSDVWSFGILLMEIVTYGRI---PYPGMSNPEVI 379
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + + + VAVK +H+ + M E +VL + H NIV
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE----------- 120
LL G +++ E C G L N L +++ + ++ +
Sbjct: 109 NLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 121 ----HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
+ GM L +HRDL NI+ I K+ DFG AR+++ D ++
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRITKICDFGLARDIKNDSNYVVK 222
Query: 177 YGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V TF + D+WS G+ L+ + + L PY G
Sbjct: 223 GNARLPVKWMAPESIFNCVY------TFES--DVWSYGIFLWELFS--LGSSPYPG 268
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQMR-EFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 109 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM- 187
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 165 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 220
Query: 188 -YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
Y R G + +WS+G+ LY + G++PF
Sbjct: 221 RYHR---------YHGRSAAVWSLGILLYDMVCGDIPF 249
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF--NQLSHMR--PHDVQM-REFEVLKKVK--HE 68
+LG G G+V+ G+ ++ PVA+K +++S P+ ++ E +LKKV
Sbjct: 37 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 96
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKH 128
+++LL E R V+ L + ++ D LQEE + ++H
Sbjct: 97 GVIRLLDWFE----RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+ ++HRD+K NI+ D KL DFG+ L +D + GT Y P+
Sbjct: 153 CHNCGVLHRDIKDENIL---IDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWI 208
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ G + +WS+G+ LY + G++PF
Sbjct: 209 RYH-------RYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+ + +RE +LK++ H NIVKLL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 71 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 127 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 178
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 179 ---KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP-HDVQMREFEVLKKVKHENIVKLLAI 76
+G+G G V++ NK GE VA+ + +RE +LK++ H NIVKLL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ K+ ++ L +D T G+ L L G+ +R++H
Sbjct: 70 IHTEN---KLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED-QQFMSLYGTEEYLHPDMYERAVLRK 195
RDLKP N++ I +G+ KL DFG AR + + T Y P++
Sbjct: 126 RDLKPQNLL--INTEGAI--KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC---- 177
Query: 196 PVGKTFGATVDLWSIGVTLYHVAT 219
K + VD+WS+G + T
Sbjct: 178 ---KYYSTAVDIWSLGCIFAEMVT 198
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 36/228 (15%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+GA G VF + + + VAVK + S D Q RE E+L ++H++IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIVR 107
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL--------------DDPENTYGLQEEEFLLV 118
+ EGR ++V E G L L D GL + L V
Sbjct: 108 FFGVC--TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ--LLAV 163
Query: 119 LEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDG-STIYKLTDFGAARELEEDQQFMSLY 177
+ AGM +L VHRDL N C G + K+ DFG +R++ +
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRN-----CLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 218
Query: 178 GTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
T + E + RK F D+WS GV L+ + T G P+
Sbjct: 219 RTMLPIRWMPPESILYRK-----FTTESDVWSFGVVLWEIFTYGKQPW 261
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 15 TSVLGKGATGAVFQGVN-KNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKH---ENI 70
S LG+G G V Q V+ + G VA+K + + + E VL+K+ +N
Sbjct: 38 VSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK--EAARLEINVLEKINEKDPDNK 95
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNILDD----PENTYGLQEEEFLLVLEHLTAGM 126
+ + + + G + + G S F+ L D P + ++ F L +
Sbjct: 96 NLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAF-----QLCQAV 150
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDD----------------GSTIYKLTDFGAARELEED 170
K L DN+L H DLKP NI+ F+ D ST ++ DFG+A +
Sbjct: 151 KFLHDNKLTHTDLKPENIL-FVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDH 207
Query: 171 QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGR 230
+ ++ T Y P++ +P D+WSIG ++ G F+ + R
Sbjct: 208 EHHSTIVSTRHYRAPEVILELGWSQP--------CDVWSIGCIIFEYYVGFTLFQTHDNR 259
Query: 231 RNKETMYYITTKKASGVISGTQTSE---NGEIDW 261
+ M I S +I T+ + G +DW
Sbjct: 260 EHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDW 293
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + + + VAVK +H+ + M E +VL + H NIV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE----------- 120
LL G +++ E C G L N L +++ + ++ +
Sbjct: 114 NLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 121 ----HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
+ GM L +HRDL NI+ I K+ DFG AR+++ D ++
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRITKICDFGLARDIKNDSNYVVK 227
Query: 177 YGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V TF + D+WS G+ L+ + + L PY G
Sbjct: 228 GNARLPVKWMAPESIFNCVY------TFES--DVWSYGIFLWELFS--LGSSPYPG 273
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 87 IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMK 146
V+E GG L + + L EE ++ + +L + +++RDLK N++
Sbjct: 130 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 186
Query: 147 FICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATV 205
D KLTD+G +E L + GT Y+ P+ +LR G+ +G +V
Sbjct: 187 ----DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE-----ILR---GEDYGFSV 234
Query: 206 DLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
D W++GV ++ + G PF G N +
Sbjct: 235 DWWALGVLMFEMMAGRSPFDIVGSSDNPD 263
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP NI+ D+ I KL DFG + L +D+ G Y+ P ER
Sbjct: 146 VIHRDVKPSNIL---LDERGQI-KLCDFGISGRLVDDKAKDRSAGCAAYMAP---ERIDP 198
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
P + D+WS+G++L +ATG P++
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYK 230
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 87 IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMK 146
V+E GG L + + L EE ++ + +L + +++RDLK N++
Sbjct: 98 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 154
Query: 147 FICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATV 205
D KLTD+G +E L GT Y+ P+ +LR G+ +G +V
Sbjct: 155 ----DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-----ILR---GEDYGFSV 202
Query: 206 DLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
D W++GV ++ + G PF G N +
Sbjct: 203 DWWALGVLMFEMMAGRSPFDIVGSSDNPD 231
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 40/236 (16%)
Query: 18 LGKGATGAVFQG-----VNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV-KHENIV 71
LG GA G V + + + VAVK +H+ + M E +VL + H NIV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE----------- 120
LL G +++ E C G L N L +++ + ++ +
Sbjct: 114 NLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 121 ----HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL 176
+ GM L +HRDL NI+ I K+ DFG AR ++ D ++
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILL----THGRITKICDFGLARHIKNDSNYVVK 227
Query: 177 YGTE---EYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+++ P+ V TF + D+WS G+ L+ + + L PY G
Sbjct: 228 GNARLPVKWMAPESIFNCVY------TFES--DVWSYGIFLWELFS--LGSSPYPG 273
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 87 IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMK 146
V+E GG L + + L EE ++ + +L + +++RDLK N++
Sbjct: 83 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 139
Query: 147 FICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATV 205
D KLTD+G +E L GT Y+ P+ +LR G+ +G +V
Sbjct: 140 ----DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-----ILR---GEDYGFSV 187
Query: 206 DLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
D W++GV ++ + G PF G N +
Sbjct: 188 DWWALGVLMFEMMAGRSPFDIVGSSDNPD 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 17 VLGKGATGAVFQG-VNKNNGE--PVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENIV 71
+LGKG G+V + + + +G VAVK + + D++ +RE +K+ H ++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 72 KLLAIEEEQEGRGKV----IVMELCTGGSLFNILDDP---ENTYGLQEEEFLLVLEHLTA 124
KL+ + +G++ +++ G L L EN + L + + + +
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 125 GMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLH 184
GM++L +HRDL N M + +D + + DFG +R++ + G L
Sbjct: 149 GMEYLSSRNFIHRDLAARNCM--LAEDMTVC--VADFGLSRKIYSGDYYRQ--GCASKLP 202
Query: 185 PDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYI 239
+ L + D+W+ GVT++ + T PY G N E Y+
Sbjct: 203 ---VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ--TPYAGIENAEIYNYL 252
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 87 IVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMK 146
V+E GG L + + L EE ++ + +L + +++RDLK N++
Sbjct: 87 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 143
Query: 147 FICDDGSTIYKLTDFGAARE-LEEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATV 205
D KLTD+G +E L GT Y+ P+ +LR G+ +G +V
Sbjct: 144 ----DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE-----ILR---GEDYGFSV 191
Query: 206 DLWSIGVTLYHVATGNLPFRPYGGRRNKE 234
D W++GV ++ + G PF G N +
Sbjct: 192 DWWALGVLMFEMMAGRSPFDIVGSSDNPD 220
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVK-TFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G G+ G ++ G N +GE VA+K + H + H ++ + +++++ +K
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLH-IESKFYKMMQGGVGIPSIKWCG- 74
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
EG V+VMEL G SL ++ + + L+ LL+ + + + ++++ +H
Sbjct: 75 ---AEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKT--VLLLADQMISRIEYIHSKNFIH 128
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--------QQFMSLYGTEEYLHPDMY 188
RD+KP N + + G+ +Y + DFG A++ + ++ +L GT Y
Sbjct: 129 RDVKPDNFLMGLGKKGNLVY-IIDFGLAKKYRDARTHQHIPYRENKNLTGTARY------ 181
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVI 248
A + +G DL S+G L + G+LP++ ++ I+ KK S I
Sbjct: 182 --ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239
Query: 249 ----SGTQTSENGEIDWCTDL 265
G + + +++C L
Sbjct: 240 EVLCKGYPSEFSTYLNFCRSL 260
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L + + S G
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANSFVG 196
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 197 TAQYVSPELLTE--------KSASKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVKLL 74
++G+G G V+ + G+ A+K ++ + + + + E +L V + ++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGL-QEEEFLLVLEHLTAGMKHLRDN 132
+ K+ +++L GG L L + +G+ E + + G++H+ +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+V+RDLKP NI+ D+ + +++D G A + + + S+ GT Y+ P++ ++ V
Sbjct: 312 FVVYRDLKPANIL---LDEHGHV-RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGV 366
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ ++ D +S+G L+ + G+ PFR
Sbjct: 367 -------AYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVKLL 74
++G+G G V+ + G+ A+K ++ + + + + E +L V + ++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGL-QEEEFLLVLEHLTAGMKHLRDN 132
+ K+ +++L GG L L + +G+ E + + G++H+ +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+V+RDLKP NI+ D+ + +++D G A + + + S+ GT Y+ P++ ++ V
Sbjct: 312 FVVYRDLKPANIL---LDEHGHV-RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGV 366
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ ++ D +S+G L+ + G+ PFR
Sbjct: 367 -------AYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVKLL 74
++G+G G V+ + G+ A+K ++ + + + + E +L V + ++
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGL-QEEEFLLVLEHLTAGMKHLRDN 132
+ K+ +++L GG L L + +G+ E + + G++H+ +
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+V+RDLKP NI+ D+ + +++D G A + + + S+ GT Y+ P++ ++ V
Sbjct: 312 FVVYRDLKPANIL---LDEHGHV-RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGV 366
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ ++ D +S+G L+ + G+ PFR
Sbjct: 367 -------AYDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVKLL 74
++G+G G V+ + G+ A+K ++ + + + + E +L V + ++
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 75 AIEEEQEGRGKV-IVMELCTGGSLFNILDDPENTYGL-QEEEFLLVLEHLTAGMKHLRDN 132
+ K+ +++L GG L L + +G+ E + + G++H+ +
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGLEHMHNR 310
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+V+RDLKP NI+ D+ + +++D G A + + + S+ GT Y+ P++ ++ V
Sbjct: 311 FVVYRDLKPANIL---LDEHGHV-RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGV 365
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ ++ D +S+G L+ + G+ PFR
Sbjct: 366 -------AYDSSADWFSLGCMLFKLLRGHSPFR 391
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRP--HDVQMREFEVLKKVKHENIVKLLA 75
LG+G G V++ ++ E VA+K +L H +RE +LK+++H NI++L +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLV 135
+ ++ ++ L +D + + FL L G+ R +
Sbjct: 101 VIHHNH---RLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLY---QLINGVNFCHSRRCL 154
Query: 136 HRDLKPGNIMKFICDDGST-IYKLTDFGAARELE-EDQQFMSLYGTEEYLHPDMYERAVL 193
HRDLKP N++ + D T + K+ DFG AR +QF T Y P++ +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS-- 212
Query: 194 RKPVGKTFGATVDLWSIG 211
+ + +VD+WSI
Sbjct: 213 -----RHYSTSVDIWSIA 225
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
+LG+G+ V A+K + ++ + V RE +V+ ++ H VKL
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ E + G L + E + + +++L +
Sbjct: 96 FTFQDDEKL--YFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYERA 191
+HRDLKP NI+ + +D ++TDFG A+ L + + S GT +Y+ P++
Sbjct: 151 IHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE- 205
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
K+ + DLW++G +Y + G PFR
Sbjct: 206 -------KSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L + + S G
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANSFVG 197
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 198 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
+ HRD+KP NI+ D + KL+DFG + E D++ GT E++ P+ +
Sbjct: 173 ICHRDVKPSNILM----DKNGRVKLSDFGES-EYMVDKKIKGSRGTYEFMPPEFFSNE-- 225
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
GA VD+WS+G+ LY + +PF
Sbjct: 226 ----SSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 29/219 (13%)
Query: 19 GKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQ-MREFEVLKKVKHENIVKLLAI- 76
G+G G V G K+ G VA+K Q R ++Q M++ VL H NIV+L +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH---HPNIVQLQSYF 88
Query: 77 ----EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHL------TAGM 126
E ++ +VME +L N Y Q ++++ + G
Sbjct: 89 YTLGERDRRDIYLNVVMEY-VPDTLHRCC---RNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 127 KHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPD 186
HL + HRD+KP N++ ++ KL DFG+A++L + ++ + Y P+
Sbjct: 145 LHLPSVNVCHRDIKPHNVL---VNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPE 201
Query: 187 MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
+ + + VD+WS+G + G FR
Sbjct: 202 LIFG-------NQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 42/226 (18%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
++G+G GAV++G + PVAVK F+ + R + + + + ++H+NI + +
Sbjct: 20 LIGRGRYGAVYKG--SLDERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 77 EEEQEGRGKV---IVMELCTGGSLFNILDDPENTYGLQEEEFL--LVLEH-LTAGMKHLR 130
+E G++ +VME GSL L L +++ L H +T G+ +L
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL-------SLHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 131 DN---------RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL---------EEDQQ 172
+ HRDL N++ + +DG+ + ++DFG + L EED
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVL--VKNDGTCV--ISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 173 FMSLYGTEEYLHPDMYERAV-LRKPVGKTFGATVDLWSIGVTLYHV 217
+S GT Y+ P++ E AV LR ++ VD++++G+ + +
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRD--XESALKQVDMYALGLIYWEI 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
+LG+G+ V A+K + ++ + V RE +V+ ++ H VKL
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 76
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ E + G L + E + + +++L +
Sbjct: 77 FTFQDDEKL--YFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYGTEEYLHPDMYERA 191
+HRDLKP NI+ + +D ++TDFG A+ L E +Q + GT +Y+ P++
Sbjct: 132 IHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 186
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
K+ + DLW++G +Y + G PFR
Sbjct: 187 -------KSACKSSDLWALGCIIYQLVAGLPPFR 213
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
+LG+G+ V A+K + ++ + V RE +V+ ++ H VKL
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 73
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ E + G L + E + + +++L +
Sbjct: 74 FTFQDDEKL--YFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYGTEEYLHPDMYERA 191
+HRDLKP NI+ + +D ++TDFG A+ L E +Q + GT +Y+ P++
Sbjct: 129 IHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 183
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
K+ + DLW++G +Y + G PFR
Sbjct: 184 -------KSACKSSDLWALGCIIYQLVAGLPPFR 210
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+VLG+GA G V + N + A+K T +LS + + E +L + H+ +V
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVMLLASLNHQYVV 65
Query: 72 KLLAIEEEQEGRGK-----------VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE 120
+ A E+ K I ME C G+L++++ EN Q +E+ +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENL-NQQRDEYWRLFR 123
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM-----S 175
+ + ++ ++HRDLKP NI FI D S K+ DFG A+ + + +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNI--FI--DESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 176 LYGTEEYLHP----DMYERAVLRKPVGKTFGATVDLWSIGVTLYHV 217
L G+ + L MY + G + +D++S+G+ + +
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEM 224
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
+LG+G+ V A+K + ++ + V RE +V+ ++ H VKL
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ E + G L + E + + +++L +
Sbjct: 75 FTFQDDEKL--YFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYGTEEYLHPDMYERA 191
+HRDLKP NI+ + +D ++TDFG A+ L E +Q + GT +Y+ P++
Sbjct: 130 IHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 184
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
K+ + DLW++G +Y + G PFR
Sbjct: 185 -------KSACKSSDLWALGCIIYQLVAGLPPFR 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
+LG+G+ V A+K + ++ + V RE +V+ ++ H VKL
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ E + G L + E + + +++L +
Sbjct: 81 FTFQDDEKL--YFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYGTEEYLHPDMYERA 191
+HRDLKP NI+ + +D ++TDFG A+ L E +Q + GT +Y+ P++
Sbjct: 136 IHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 190
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
K+ + DLW++G +Y + G PFR
Sbjct: 191 -------KSACKSSDLWALGCIIYQLVAGLPPFR 217
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
+LG+G+ V A+K + ++ + V RE +V+ ++ H VKL
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 75
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ E + G L + E + + +++L +
Sbjct: 76 FTFQDDEKL--YFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYGTEEYLHPDMYERA 191
+HRDLKP NI+ + +D ++TDFG A+ L E +Q + GT +Y+ P++
Sbjct: 131 IHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 185
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
K+ + DLW++G +Y + G PFR
Sbjct: 186 -------KSACKSSDLWALGCIIYQLVAGLPPFR 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMR-PHDVQMREFEVL---KKVKHENIV 71
S LG G+ G VF+ +K +G AVK +S R P D + EV K +H V
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCV 120
Query: 72 KLLAIEEEQEGRGKVIVM--ELCTGGSLFNILDDPENTYG--LQEEEFLLVLEHLTAGMK 127
+L EE G ++ + ELC G SL + +G L E + L +
Sbjct: 121 RLEQAWEE----GGILYLQTELC-GPSLQQHCE----AWGASLPEAQVWGYLRDTLLALA 171
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
HL LVH D+KP NI F+ G KL DFG EL G Y+ P++
Sbjct: 172 HLHSQGLVHLDVKPANI--FLGPRGRC--KLGDFGLLVELGTAGAGEVQEGDPRYMAPEL 227
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+ ++G D++S+G+T+ VA N+ P+GG
Sbjct: 228 LQ---------GSYGTAADVFSLGLTILEVAC-NMEL-PHGG 258
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L + + + G
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANAFVG 194
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 195 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 10 YVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHE 68
Y + V+GKG+ G V + + + VA+K N+ R ++R E L+K +
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEH-LTAGMK 127
N + ++ + E R + + +L+ ++ +N + + H + +
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIK--KNKFQGFSLPLVRKFAHSILQCLD 214
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
L NR++H DLKP NI+ + G + K+ DFG++ E Q+ + + Y P++
Sbjct: 215 ALHKNRIIHCDLKPENIL--LKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSRFYRAPEV 270
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
+G +G +D+WS+G L + TG P P
Sbjct: 271 I--------LGARYGMPIDMWSLGCILAELLTG-YPLLP 300
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQM--REFEVLKKVKHENIVKLL 74
+LG+G+ V A+K + ++ + V RE +V+ ++ H VKL
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ E + G L + E + + +++L +
Sbjct: 96 FTFQDDEKL--YFGLSYAKNGELLKYI---RKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 135 VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYGTEEYLHPDMYERA 191
+HRDLKP NI+ + +D ++TDFG A+ L E +Q + GT +Y+ P++
Sbjct: 151 IHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE- 205
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
K+ + DLW++G +Y + G PFR
Sbjct: 206 -------KSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 196
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 197 TAQYVSPELLTE--------KSAXKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 10 YVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHE 68
Y + V+GKG+ G V + + + VA+K N+ R ++R E L+K +
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEH-LTAGMK 127
N + ++ + E R + + +L+ ++ +N + + H + +
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIK--KNKFQGFSLPLVRKFAHSILQCLD 214
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
L NR++H DLKP NI+ + G + K+ DFG++ E Q+ + + Y P++
Sbjct: 215 ALHKNRIIHCDLKPENIL--LKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSRFYRAPEV 270
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
+G +G +D+WS+G L + TG P P
Sbjct: 271 I--------LGARYGMPIDMWSLGCILAELLTG-YPLLP 300
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 196
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 197 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 33/227 (14%)
Query: 18 LGKGATGAVFQGVNKN-----NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
LG+GA G VF N + VAVK + D Q RE E+L ++HE+IVK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ-REAELLTNLQHEHIVK 81
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNIL------------DDPENTYG-LQEEEFLLVL 119
+ +G ++V E G L L P G L + L +
Sbjct: 82 FYGVC--GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGST-IYKLTDFGAARELEEDQQFMSLYG 178
+ +GM +L VHRDL N C G+ + K+ DFG +R++ +
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRN-----CLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
T + E + RK F D+WS GV L+ + T G P+
Sbjct: 195 TMLPIRWMPPESIMYRK-----FTTESDVWSFGVILWEIFTYGKQPW 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 194
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 195 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 194
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 195 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 139 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 194
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 195 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 146 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 201
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 202 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 240
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 196
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 197 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 142 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 197
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 198 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 196
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 197 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAAREL-EEDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 144 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 199
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 200 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 238
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 122 LTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE-EDQQFMS--LYG 178
+ + +++L ++HRDLKP NI+ + +D ++TDFG A+ L E +Q + G
Sbjct: 141 IVSALEYLHGKGIIHRDLKPENIL--LNEDMHI--QITDFGTAKVLSPESKQARANXFVG 196
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
T +Y+ P++ K+ + DLW++G +Y + G PFR
Sbjct: 197 TAQYVSPELLTE--------KSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 85 IINLLGACT-QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKD 140
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 190
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 191 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 239
Query: 225 RPYGG 229
PY G
Sbjct: 240 SPYPG 244
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 81 IINLLGACT-QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ--LSSKD 136
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 186
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 187 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 235
Query: 225 RPYGG 229
PY G
Sbjct: 236 SPYPG 240
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 26/240 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVK-TFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G G+ G ++ G + GE VA+K + H + H ++ + +++++ ++
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH-IESKIYKMMQGGVGIPTIRWCG- 74
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
EG V+VMEL G SL ++ + + L+ LL+ + + + ++++ +H
Sbjct: 75 ---AEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKT--VLLLADQMISRIEYIHSKNFIH 128
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEED--------QQFMSLYGTEEYLHPDMY 188
RD+KP N + + G+ +Y + DFG A++ + ++ +L GT Y
Sbjct: 129 RDVKPDNFLMGLGKKGNLVY-IIDFGLAKKYRDARTHQHIPYRENKNLTGTARY------ 181
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVI 248
A + +G DL S+G L + G+LP++ ++ I+ KK S I
Sbjct: 182 --ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 89 IINLLG-ACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKD 144
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 194
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 195 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 243
Query: 225 RPYGG 229
PY G
Sbjct: 244 SPYPG 248
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S GT Y+ P+ +
Sbjct: 148 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 96 IINLLG-ACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ--LSSKD 151
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 201
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 202 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 250
Query: 225 RPYGG 229
PY G
Sbjct: 251 SPYPG 255
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 88 IINLLGACT-QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKD 143
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 193
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 194 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 242
Query: 225 RPYGG 229
PY G
Sbjct: 243 SPYPG 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 96 IINLLGACT-QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKD 151
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 201
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 202 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 250
Query: 225 RPYGG 229
PY G
Sbjct: 251 SPYPG 255
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 26/240 (10%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVK-TFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+G G+ G ++ G + GE VA+K + H + H ++ + +++++ ++
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH-IESKIYKMMQGGVGIPTIRWCG- 72
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
EG V+VMEL G SL ++ + + L+ LL+ + + + ++++ +H
Sbjct: 73 ---AEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKT--VLLLADQMISRIEYIHSKNFIH 126
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM--------SLYGTEEYLHPDMY 188
RD+KP N + + G+ +Y + DFG A++ + + +L GT Y
Sbjct: 127 RDVKPDNFLMGLGKKGNLVY-IIDFGLAKKYRDARTHQHIPYRENKNLTGTARY------ 179
Query: 189 ERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGVI 248
A + +G DL S+G L + G+LP++ ++ I+ KK S I
Sbjct: 180 --ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 237
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 96 IINLLGACT-QDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ--LSSKD 151
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 201
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 202 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 250
Query: 225 RPYGG 229
PY G
Sbjct: 251 SPYPG 255
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 46/239 (19%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L FN +PE L ++
Sbjct: 96 IINLLG-ACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ--LSSKD 151
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEE-DQQF 173
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++ D
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIHHIDXXK 207
Query: 174 MSLYG--TEEYLHPD-MYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGG 229
+ G +++ P+ +++R + D+WS GV L+ + T L PY G
Sbjct: 208 KTTNGRLPVKWMAPEALFDR---------IYTHQSDVWSFGVLLWEIFT--LGGSPYPG 255
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 17 VLGKGATGAVFQGVNKNNG--EPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIVKL 73
V+G+G G V + K +G A+K + + H E EVL K+ H NI+ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 74 LAIEEEQEGRGKV-IVMELCTGGSLFNIL-------DDPENTYG------LQEEEFLLVL 119
L E RG + + +E G+L + L DP L ++ L
Sbjct: 82 LGACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
+ GM +L + +HRDL NI+ + + K+ DFG +R G
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIADFGLSR------------GQ 182
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATV-----DLWSIGVTLYHVAT-GNLPF 224
E Y+ M R +R ++ +V D+WS GV L+ + + G P+
Sbjct: 183 EVYVKKTM-GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S GT Y+ P+ +
Sbjct: 129 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 63/250 (25%)
Query: 18 LGKGATGAVFQGV-----NKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENI 70
LG+G G V + + VAVK + + P +++ + EF VLK+V H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE--NASPSELRDLLSEFNVLKQVNHPHV 88
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNIL----------------------DDPENTY 108
+KL Q+G ++++E GSL L D P+
Sbjct: 89 IKLYG-ACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER- 145
Query: 109 GLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE 168
L + + ++ GM++L + +LVHRDL NI+ +G + K++DFG +R++
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL---VAEGRKM-KISDFGLSRDVY 201
Query: 169 EDQQFMSLYGTEEYLHPDMYERAVLRKPV---------GKTFGATVDLWSIGVTLYHVAT 219
E+ ++ +R+ R PV + D+WS GV L+ + T
Sbjct: 202 EEDSYV--------------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 220 GNLPFRPYGG 229
L PY G
Sbjct: 248 --LGGNPYPG 255
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 17 VLGKGATGAVFQGVNKNNG--EPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIVKL 73
V+G+G G V + K +G A+K + + H E EVL K+ H NI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 74 LAIEEEQEGRGKV-IVMELCTGGSLFNIL-------DDPENTYG------LQEEEFLLVL 119
L E RG + + +E G+L + L DP L ++ L
Sbjct: 92 LGACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
+ GM +L + +HRDL NI+ + + K+ DFG +R G
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILV----GENYVAKIADFGLSR------------GQ 192
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATV-----DLWSIGVTLYHVAT-GNLPF 224
E Y+ M R +R ++ +V D+WS GV L+ + + G P+
Sbjct: 193 EVYVKKTM-GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S GT Y+ P+ +
Sbjct: 132 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S GT Y+ P+ +
Sbjct: 148 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S GT Y+ P+ +
Sbjct: 176 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S GT Y+ P+ +
Sbjct: 176 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 18 LGKGATGAVF--QGVNKNNGEP-----VAVKTFNQLSHMRPHDVQMREFEVLKKV-KHEN 69
LG+GA G V + + + +P VAVK + + + E E++K + KH+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 70 IVKLLAIEEEQEGRGKVIVMELCTGGSL---------------FNILDDPENTYGLQEEE 114
I+ LL Q+G VIV E + G+L +N +PE L ++
Sbjct: 137 IINLLG-ACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--LSSKD 192
Query: 115 FLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM 174
+ + GM++L + +HRDL N++ + +D + K+ DFG AR++
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVL--VTED--NVMKIADFGLARDIH------ 242
Query: 175 SLYGTEEYLHPDMYERAV-LRKPV---------GKTFGATVDLWSIGVTLYHVATGNLPF 224
H D Y++ R PV + + D+WS GV L+ + T L
Sbjct: 243 ---------HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGG 291
Query: 225 RPYGG 229
PY G
Sbjct: 292 SPYPG 296
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 10 YVWCTTSVLGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHE 68
Y + V+GKG G V + + + VA+K N+ R ++R E L+K +
Sbjct: 97 YRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 69 NIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEH-LTAGMK 127
N + ++ + E R + + +L+ ++ +N + + H + +
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIK--KNKFQGFSLPLVRKFAHSILQCLD 214
Query: 128 HLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDM 187
L NR++H DLKP NI+ + G + K+ DFG++ E Q+ + Y P++
Sbjct: 215 ALHKNRIIHCDLKPENIL--LKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSRFYRAPEV 270
Query: 188 YERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRP 226
+G +G +D+WS+G L + TG P P
Sbjct: 271 I--------LGARYGMPIDMWSLGCILAELLTG-YPLLP 300
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 120/290 (41%), Gaps = 45/290 (15%)
Query: 17 VLGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
VLGKG G + ++ GE + +K + ++E +V++ ++H N++K + +
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDE-ETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 77 EEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVH 136
+ + + E GG+L I+ ++ Y + + + + +GM +L ++H
Sbjct: 76 LYKDKRLN--FITEYIKGGTLRGIIKSMDSQYPWSQR--VSFAKDIASGMAYLHSMNIIH 131
Query: 137 RDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER-AVLRK 195
RDL N + + ++ + + + DFG AR + +++ G PD +R V+
Sbjct: 132 RDLNSHNCL--VRENKNVV--VADFGLARLMVDEKT--QPEGLRSLKKPDRKKRYTVVGN 185
Query: 196 PV--------GKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYYITTKKASGV 247
P G+++ VD++S G+ L + GR N + Y T
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII----------GRVNADPDYLPRTMDFGLN 235
Query: 248 ISGTQTSENGEIDWCTDLPNNCQLSLGLKKLVTPILAGLLEVDSKKIWSF 297
+ G +C P NC S PI ++D +K SF
Sbjct: 236 VRGFLDR------YC---PPNCPPSF------FPITVRCCDLDPEKRPSF 270
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S GT Y+ P+ +
Sbjct: 128 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMRE-FEVLKKVKHENIVKLLAI 76
+G+G+ V++G++ VA + + +E E LK ++H NIV+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD- 92
Query: 77 EEEQEGRGK---VIVMELCTGGSLFNILDDPENTYGLQEEEFLLV-LEHLTAGMK--HLR 130
E +GK V+V EL T G+L L + + + + L + G++ H R
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 131 DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYER 190
++HRDLK NI FI ++ K+ D G A L+ ++ GT E+ P+ YE
Sbjct: 149 TPPIIHRDLKCDNI--FITGPTGSV-KIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYE- 203
Query: 191 AVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + +VD+++ G AT P+
Sbjct: 204 --------EKYDESVDVYAFGXCXLEXATSEYPY 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQG-VNKNNGE--PVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVK 72
LG G+ G V +G + +G+ VAVK LS D +RE + + H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L + + +V EL GSL + L + + L V + GM +L
Sbjct: 80 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R +HRDL N++ D + K+ DFG R L ++ Y +E+ +
Sbjct: 135 RFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDH---YVMQEHRKVP-FAWCA 186
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+TF D W GVTL+ + T G P+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQG-VNKNNGE--PVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVK 72
LG G+ G V +G + +G+ VAVK LS D +RE + + H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L + + +V EL GSL + L + + L V + GM +L
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R +HRDL N++ D + K+ DFG R L ++ Y +E+ +
Sbjct: 131 RFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDH---YVMQEHRKVP-FAWCA 182
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+TF D W GVTL+ + T G P+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQG-VNKNNGE--PVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVK 72
LG G+ G V +G + +G+ VAVK LS D +RE + + H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L + + +V EL GSL + L + + L V + GM +L
Sbjct: 80 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R +HRDL N++ D + K+ DFG R L ++ Y +E+ +
Sbjct: 135 RFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDH---YVMQEHRKVP-FAWCA 186
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+TF D W GVTL+ + T G P+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 29/222 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF------NQLSHMRPHDVQMREFEVLKKVKHENIV 71
+GKG G V +G + VA+K+ + + RE ++ + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
KL + +VME G L++ L D + ++ L ++ + G++++++
Sbjct: 87 KLYGLMHNP----PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 132 NR--LVHRDLKPGNIMKFICDDGSTI-YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+VHRDL+ NI D+ + + K+ DFG +++ L G +++ P+
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ--SVHSVSGLLGNFQWMAPET- 197
Query: 189 ERAVLRKPVG---KTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+G +++ D +S + LY + TG PF Y
Sbjct: 198 --------IGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQG-VNKNNGE--PVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVK 72
LG G+ G V +G + +G+ VAVK LS D +RE + + H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L + + +V EL GSL + L + + L V + GM +L
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R +HRDL N++ D + K+ DFG R L ++ Y +E+ +
Sbjct: 131 RFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDH---YVMQEHRKVP-FAWCA 182
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+TF D W GVTL+ + T G P+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 27/211 (12%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVK-HENIVKLLAI 76
LG+G VF+ +N N E V VK L ++ + ++ RE ++L+ ++ NI+ L I
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKI---LKPVKKNKIK-REIKILENLRGGPNIITLADI 100
Query: 77 EEEQEGRGKVIVMELCTG---GSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNR 133
++ R +V E L+ L D + + + E + + +
Sbjct: 101 VKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYE---------ILKALDYCHSMG 151
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAVL 193
++HRD+KP N+M D +L D+G A Q++ + + P++
Sbjct: 152 IMHRDVKPHNVM---IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY-- 206
Query: 194 RKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+ + ++D+WS+G L + PF
Sbjct: 207 -----QMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 29/222 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF------NQLSHMRPHDVQMREFEVLKKVKHENIV 71
+GKG G V +G + VA+K+ + + RE ++ + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
KL + +VME G L++ L D + ++ L ++ + G++++++
Sbjct: 87 KLYGLMHNP----PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 132 NR--LVHRDLKPGNIMKFICDDGSTI-YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+VHRDL+ NI D+ + + K+ DFG +++ L G +++ P+
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ--SVHSVSGLLGNFQWMAPET- 197
Query: 189 ERAVLRKPVG---KTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+G +++ D +S + LY + TG PF Y
Sbjct: 198 --------IGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 37/226 (16%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVK----TFNQLSHMRPHDVQMREFEVLKKVKHENIV 71
+VLG+GA G V + N + A+K T +LS + + E +L + H+ +V
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI------LSEVMLLASLNHQYVV 65
Query: 72 KLLAIEEEQEGRGK-----------VIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE 120
+ A E+ K I ME C +L++++ EN Q +E+ +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS-ENL-NQQRDEYWRLFR 123
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM-----S 175
+ + ++ ++HRDLKP NI FI D S K+ DFG A+ + + +
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNI--FI--DESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 176 LYGTEEYLHP----DMYERAVLRKPVGKTFGATVDLWSIGVTLYHV 217
L G+ + L MY + G + +D++S+G+ + +
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGH-YNEKIDMYSLGIIFFEM 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQG-VNKNNGE--PVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVK 72
LG G+ G V +G + +G+ VAVK LS D +RE + + H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L + + +V EL GSL + L + + L V + GM +L
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R +HRDL N++ D + K+ DFG R L ++ + E P +
Sbjct: 131 RFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHXVM--QEHRKVP--FAWCA 182
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+TF D W GVTL+ + T G P+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
S++GKG+ G V + ++ E VA+K N+ + + +++R E++ K E ++
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ R + ++ +L+++L + N G+ + + + L L
Sbjct: 120 HLKRHFMFRNHLCLVFEMLSYNLYDLLRN-TNFRGVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 135 --VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+H DLKP NI+ +C+ + K+ DFG++ +L Q+ + Y P++
Sbjct: 179 SIIHCDLKPENIL--LCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVL---- 230
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + +D+WS+G L + TG F
Sbjct: 231 ----LGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L +N + +++
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQ--QNRH-VKD 468
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 469 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 524
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRR 231
+ T Y + F + D+WS GV ++ + G P+R G +
Sbjct: 525 YYKAQ-THGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQKPYR---GMK 577
Query: 232 NKETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 578 GSEVTAMLEKGERMGCPAG 596
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L +N + +++
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQ--QNRH-VKD 469
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 470 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 525
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHV-ATGNLPFRPYGGRR 231
+ T Y + F + D+WS GV ++ + G P+R G +
Sbjct: 526 YYKAQ-THGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQKPYR---GMK 578
Query: 232 NKETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 579 GSEVTAMLEKGERMGCPAG 597
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
S++GKG+ G V + ++ E VA+K N+ + + +++R E++ K E ++
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 100
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ R + ++ +L+++L + N G+ + + + L L
Sbjct: 101 HLKRHFMFRNHLCLVFEMLSYNLYDLLRN-TNFRGVSLNLTRKFAQQMCTALLFLATPEL 159
Query: 135 --VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+H DLKP NI+ +C+ + K+ DFG++ +L Q+ + Y P++
Sbjct: 160 SIIHCDLKPENIL--LCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVL---- 211
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + +D+WS+G L + TG F
Sbjct: 212 ----LGMPYDLAIDMWSLGCILVEMHTGEPLF 239
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 18 LGKGATGAVFQGVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLLAI 76
+ G G ++ +++N NG PV +K + M E + L +V H +IV++
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNF 147
Query: 77 EEEQEGRG---KVIVMELCTGGSLFNILDDPENTYG--LQEEEFLLVLEHLTAGMKHLRD 131
E + G IVME G SL + + G L E + L + + +L
Sbjct: 148 VEHTDRHGDPVGYIVMEYVGGQSL-------KRSKGQKLPVAEAIAYLLEILPALSYLHS 200
Query: 132 NRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERA 191
LV+ DLKP NIM + ++ KL D GA + F LYGT + P++
Sbjct: 201 IGLVYNDLKPENIM--LTEEQ---LKLIDLGAVSRI---NSFGYLYGTPGFQAPEIVR-- 250
Query: 192 VLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFR 225
G T D++++G TL + T +LP R
Sbjct: 251 -----TGPTV--ATDIYTVGRTLAAL-TLDLPTR 276
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQG-VNKNNGE--PVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVK 72
LG G+ G V +G + +G+ VAVK LS D +RE + + H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L + + +V EL GSL + L + + L V + GM +L
Sbjct: 86 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R +HRDL N++ D + K+ DFG R L ++ Y +E+ +
Sbjct: 141 RFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDH---YVMQEHRKVP-FAWCA 192
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+TF D W GVTL+ + T G P+
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 134 LVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFM---SLYGTEEYLHPDMYER 190
+VH DLKP N F+ DG + KL DFG A +++ D + S G Y+ P+ +
Sbjct: 176 IVHSDLKPAN---FLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 191 AVLRKPVGKTFGATV---DLWSIGVTLYHVATGNLPFR 225
+ GK+ D+WS+G LY++ G PF+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 101/290 (34%), Gaps = 99/290 (34%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY----------------------- 108
LL + G VIV E C G+L L N +
Sbjct: 88 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVD 146
Query: 109 -----------------GLQEEEFL----------------LVLEHLTA-------GMKH 128
G EE+ L L LEHL GM+
Sbjct: 147 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEF 206
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
L + +HRDL NI+ + K+ DFG AR++ +D PD
Sbjct: 207 LASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD--------------PDYV 248
Query: 189 ERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
+ R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 249 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 296
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 17 VLGKGATGAVFQGVNKNNG--EPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIVKL 73
V+G+G G V + K +G A+K + + H E EVL K+ H NI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 74 LAIEEEQEGRGKV-IVMELCTGGSLFNIL-------DDPENTYG------LQEEEFLLVL 119
L E RG + + +E G+L + L DP L ++ L
Sbjct: 89 LGACEH---RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 120 EHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGT 179
+ GM +L + +HR+L NI+ + + K+ DFG +R G
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILV----GENYVAKIADFGLSR------------GQ 189
Query: 180 EEYLHPDMYERAVLRKPVGKTFGATV-----DLWSIGVTLYHVAT-GNLPF 224
E Y+ M R +R ++ +V D+WS GV L+ + + G P+
Sbjct: 190 EVYVKKTM-GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E ++VME+ G L L + +++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGI---CEAESWMLVMEMAELGPLNKYL---QQNRHVKD 126
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 182
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
+ T Y + F + D+WS GV ++ + +PY G +
Sbjct: 183 YYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 236
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 237 SEVTAMLEKGERMGCPAG 254
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E ++VME+ G L L + +++
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGI---CEAESWMLVMEMAELGPLNKYL---QQNRHVKD 126
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 127 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 182
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
+ T Y + F + D+WS GV ++ + +PY G +
Sbjct: 183 YYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 236
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 237 SEVTAMLEKGERMGCPAG 254
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 101/290 (34%), Gaps = 99/290 (34%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY----------------------- 108
LL + G VIV E C G+L L N +
Sbjct: 90 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVD 148
Query: 109 -----------------GLQEEEFL----------------LVLEHLTA-------GMKH 128
G EE+ L L LEHL GM+
Sbjct: 149 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEF 208
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
L + +HRDL NI+ + K+ DFG AR++ +D PD
Sbjct: 209 LASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD--------------PDYV 250
Query: 189 ERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
+ R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 298
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L + +++
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQQNRH---VKD 106
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 107 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 162
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
+ T Y + F + D+WS GV ++ + +PY G +
Sbjct: 163 YYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 216
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 217 SEVTAMLEKGERMGCPAG 234
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 63/250 (25%)
Query: 18 LGKGATGAVFQGV-----NKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENI 70
LG+G G V + + VAVK + + P +++ + EF VLK+V H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE--NASPSELRDLLSEFNVLKQVNHPHV 88
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNIL----------------------DDPENTY 108
+KL Q+G ++++E GSL L D P+
Sbjct: 89 IKLYG-ACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER- 145
Query: 109 GLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE 168
L + + ++ GM++L + +LVHRDL NI+ +G + K++DFG +R++
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL---VAEGRKM-KISDFGLSRDVY 201
Query: 169 EDQQFMSLYGTEEYLHPDMYERAVLRKPV---------GKTFGATVDLWSIGVTLYHVAT 219
E+ + +R+ R PV + D+WS GV L+ + T
Sbjct: 202 EEDSXV--------------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 220 GNLPFRPYGG 229
L PY G
Sbjct: 248 --LGGNPYPG 255
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L + +++
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQQNRH---VKD 110
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 166
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
+ T Y + F + D+WS GV ++ + +PY G +
Sbjct: 167 YYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 220
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 221 SEVTAMLEKGERMGCPAG 238
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L + +++
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQQNRH---VKD 104
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 105 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 160
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
+ T Y + F + D+WS GV ++ + +PY G +
Sbjct: 161 YYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 214
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 215 SEVTAMLEKGERMGCPAG 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L + +++
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQQNRH---VKD 124
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 125 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 180
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
+ T Y + F + D+WS GV ++ + +PY G +
Sbjct: 181 YYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 234
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 235 SEVTAMLEKGERMGCPAG 252
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 101/290 (34%), Gaps = 99/290 (34%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY----------------------- 108
LL + G VIV E C G+L L N +
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVD 153
Query: 109 -----------------GLQEEEFL----------------LVLEHLTA-------GMKH 128
G EE+ L L LEHL GM+
Sbjct: 154 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEF 213
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
L + +HRDL NI+ + K+ DFG AR++ +D PD
Sbjct: 214 LASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD--------------PDYV 255
Query: 189 ERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
+ R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 256 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 303
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 18 LGKGATGAVFQG-VNKNNGE--PVAVKTFNQ--LSHMRPHDVQMREFEVLKKVKHENIVK 72
LG G+ G V +G + +G+ VAVK LS D +RE + + H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDN 132
L + + +V EL GSL + L + + L V + GM +L
Sbjct: 86 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 133 RLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
R +HRDL N++ D + K+ DFG R L ++ + E P +
Sbjct: 141 RFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQNDDHXVM--QEHRKVP--FAWCA 192
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVAT-GNLPF 224
+TF D W GVTL+ + T G P+
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 16 SVLGKGATGAVFQGVNKNNGEPVAVKTF-NQLSHMRPHDVQMREFEVLKKVKHENIVKLL 74
S++GKG+ G V + ++ E VA+K N+ + + +++R E++ K E ++
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 75 AIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRDNRL 134
++ R + ++ +L+++L + N G+ + + + L L
Sbjct: 120 HLKRHFMFRNHLCLVFEMLSYNLYDLLRN-TNFRGVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 135 --VHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYERAV 192
+H DLKP NI+ +C+ K+ DFG++ +L Q+ + Y P++
Sbjct: 179 SIIHCDLKPENIL--LCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVL---- 230
Query: 193 LRKPVGKTFGATVDLWSIGVTLYHVATGNLPF 224
+G + +D+WS+G L + TG F
Sbjct: 231 ----LGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 36/256 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEP-VAVKTFNQLSHMRPHDVQMREFEVLKKVKH---ENIVKL 73
LG+G G V + ++ G+ VA+K + R + E VLKK+K EN
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--EAARLEINVLKKIKEKDKENKFLC 93
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPE-NTYGLQEEEFLLVLEHLTAGMKHLRDN 132
+ + + G + + G + F L + Y L + L ++ L +N
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAY--QLCHALRFLHEN 151
Query: 133 RLVHRDLKPGNIMKFICDDGSTIY----------------KLTDFGAARELEEDQQFMSL 176
+L H DLKP NI+ F+ + T+Y ++ DFG+A + + ++
Sbjct: 152 QLTHTDLKPENIL-FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTI 208
Query: 177 YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
T Y P++ +P D+WSIG L+ G F+ + R + M
Sbjct: 209 VATRHYRPPEVILELGWAQP--------CDVWSIGCILFEYYRGFTLFQTHENREHLVMM 260
Query: 237 YYITTKKASGVISGTQ 252
I S +I T+
Sbjct: 261 EKILGPIPSHMIHRTR 276
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 101/290 (34%), Gaps = 99/290 (34%)
Query: 18 LGKGATGAVFQ----GVNKN-NGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHE-NIV 71
LG+GA G V + G++K VAVK + + H M E ++L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTY----------------------- 108
LL + G VIV E C G+L L N +
Sbjct: 97 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVD 155
Query: 109 -----------------GLQEEEFL----------------LVLEHLTA-------GMKH 128
G EE+ L L LEHL GM+
Sbjct: 156 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEF 215
Query: 129 LRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
L + +HRDL NI+ + K+ DFG AR++ +D PD
Sbjct: 216 LASRKCIHRDLAARNILL----SEKNVVKICDFGLARDIYKD--------------PDYV 257
Query: 189 ERAVLRKPVGKTFGATV---------DLWSIGVTLYHVATGNLPFRPYGG 229
+ R P+ T+ D+WS GV L+ + + L PY G
Sbjct: 258 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPG 305
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L + +++
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQQNRH---VKD 116
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 172
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
+ T Y + F + D+WS GV ++ + +PY G +
Sbjct: 173 YYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 226
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 227 SEVTAMLEKGERMGCPAG 244
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 36/256 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEP-VAVKTFNQLSHMRPHDVQMREFEVLKKVKH---ENIVKL 73
LG+G G V + ++ G+ VA+K + R + E VLKK+K EN
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--EAARLEINVLKKIKEKDKENKFLC 84
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPE-NTYGLQEEEFLLVLEHLTAGMKHLRDN 132
+ + + G + + G + F L + Y L + L ++ L +N
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAY--QLCHALRFLHEN 142
Query: 133 RLVHRDLKPGNIMKFICDDGSTIY----------------KLTDFGAARELEEDQQFMSL 176
+L H DLKP NI+ F+ + T+Y ++ DFG+A + + ++
Sbjct: 143 QLTHTDLKPENIL-FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTI 199
Query: 177 YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
T Y P++ +P D+WSIG L+ G F+ + R + M
Sbjct: 200 VATRHYRPPEVILELGWAQP--------CDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251
Query: 237 YYITTKKASGVISGTQ 252
I S +I T+
Sbjct: 252 EKILGPIPSHMIHRTR 267
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 105/266 (39%), Gaps = 35/266 (13%)
Query: 18 LGKGATGAVFQGVN-KNNGEPVAVKTFNQLS-HMRPHDVQMREFEVLKKVKHENIVKLLA 75
LG+GA G V + ++ K G VAVK + + +++ E L + + +
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 76 IEEEQEGRGKVIVMELCTGGSLFNILDDPENTY-GLQEEEFLLVLEHLTAGMKHLRDNRL 134
+ E E G + ++ G S ++ + EN + + + + + + L N+L
Sbjct: 82 MLEWFEHHGHICIVFELLGLSTYDFIK--ENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 135 VHRDLKPGNIMKFICDDGSTIY----------------KLTDFGAARELEEDQQFMSLYG 178
H DLKP NI+ F+ D + Y K+ DFG+A +D+ +L
Sbjct: 140 THTDLKPENIL-FVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYDDEHHSTLVS 196
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETMYY 238
T Y P++ + + D+WSIG L G F + + + M
Sbjct: 197 TRHYRAPEVI--------LALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 239 ITTKKASGVISGTQTSE---NGEIDW 261
I +I T+ + + +DW
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDW 274
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 36/256 (14%)
Query: 18 LGKGATGAVFQGVNKNNGEP-VAVKTFNQLSHMRPHDVQMREFEVLKKVKH---ENIVKL 73
LG+G G V + ++ G+ VA+K + R + E VLKK+K EN
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--EAARLEINVLKKIKEKDKENKFLC 116
Query: 74 LAIEEEQEGRGKVIVMELCTGGSLFNILDDPE-NTYGLQEEEFLLVLEHLTAGMKHLRDN 132
+ + + G + + G + F L + Y L + L ++ L +N
Sbjct: 117 VLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAY--QLCHALRFLHEN 174
Query: 133 RLVHRDLKPGNIMKFICDDGSTIY----------------KLTDFGAARELEEDQQFMSL 176
+L H DLKP NI+ F+ + T+Y ++ DFG+A + + ++
Sbjct: 175 QLTHTDLKPENIL-FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEHHTTI 231
Query: 177 YGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKETM 236
T Y P++ +P D+WSIG L+ G F+ + R + M
Sbjct: 232 VATRHYRPPEVILELGWAQP--------CDVWSIGCILFEYYRGFTLFQTHENREHLVMM 283
Query: 237 YYITTKKASGVISGTQ 252
I S +I T+
Sbjct: 284 EKILGPIPSHMIHRTR 299
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 63/250 (25%)
Query: 18 LGKGATGAVFQGV-----NKNNGEPVAVKTFNQLSHMRPHDVQ--MREFEVLKKVKHENI 70
LG+G G V + + VAVK + + P +++ + EF VLK+V H ++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE--NASPSELRDLLSEFNVLKQVNHPHV 88
Query: 71 VKLLAIEEEQEGRGKVIVMELCTGGSLFNIL----------------------DDPENTY 108
+KL Q+G ++++E GSL L D P+
Sbjct: 89 IKLYG-ACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER- 145
Query: 109 GLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELE 168
L + + ++ GM++L + LVHRDL NI+ +G + K++DFG +R++
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNIL---VAEGRKM-KISDFGLSRDVY 201
Query: 169 EDQQFMSLYGTEEYLHPDMYERAVLRKPV---------GKTFGATVDLWSIGVTLYHVAT 219
E+ + +R+ R PV + D+WS GV L+ + T
Sbjct: 202 EEDSXV--------------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 220 GNLPFRPYGG 229
L PY G
Sbjct: 248 --LGGNPYPG 255
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV--KHENIVKLLA 75
+GKG G V++G GE VAVK F+ R RE E+ V +HENI+ +A
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 76 IEEEQEGRGKVIVMELCTG----GSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR- 130
+ R + L T GSL++ L L L ++ + +G+ HL
Sbjct: 70 --SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 131 -------DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL-----YG 178
+ HRDLK NI+ + +G + D G A + + + G
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNIL--VKKNGQCC--IADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVA 218
T+ Y+ P++ + + VD+W+ G+ L+ VA
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSY--KRVDIWAFGLVLWEVA 217
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 26/226 (11%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG G G V +GV GE PV +K S + + + H +IV+
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE---HLTAGMKHL 129
LL + G +V + GSL + + G Q L+L + GM +L
Sbjct: 98 LLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ-----LLLNWGVQIAKGMYYL 149
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
++ +VHR+L N++ + ++ DFG A L D + + LY E P +
Sbjct: 150 EEHGMVHRNLAARNVLL----KSPSQVQVADFGVADLLPPDDKQL-LY--SEAKTPIKW- 201
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKET 235
A+ GK + D+WS GVT++ + T PY G R E
Sbjct: 202 MALESIHFGK-YTHQSDVWSYGVTVWELMT--FGAEPYAGLRLAEV 244
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV--KHENIVKLLA 75
+GKG G V++G GE VAVK F+ R RE E+ V +HENI+ +A
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 76 IEEEQEGRGKVIVMELCTG----GSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR- 130
+ R + L T GSL++ L L L ++ + +G+ HL
Sbjct: 70 --SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 131 -------DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL-----YG 178
+ HRDLK NI+ + +G + D G A + + + G
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNIL--VKKNGQCC--IADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVA 218
T+ Y+ P++ + + VD+W+ G+ L+ VA
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSY--KRVDIWAFGLVLWEVA 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 53 DVQMREFEVLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQE 112
D + E V++++ + IV+++ I E + ++VME+ G L L + +++
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGICEAESW---MLVMEMAELGPLNKYLQQNRH---VKD 110
Query: 113 EEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQ 172
+ + ++ ++ GMK+L ++ VHRDL N++ K++DFG ++ L D+
Sbjct: 111 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----QHYAKISDFGLSKALRADEN 166
Query: 173 FMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRN 232
T Y + F + D+WS GV ++ + +PY G +
Sbjct: 167 XYKA-QTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQ--KPYRGMKG 220
Query: 233 KETMYYITTKKASGVISG 250
E + + G +G
Sbjct: 221 SEVTAMLEKGERMGCPAG 238
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTF------NQLSHMRPHDVQMREFEVLKKVKHENIV 71
+GKG G V +G + VA+K+ + + RE ++ + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 72 KLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLRD 131
KL + +VME G L++ L D + ++ L ++ + G++++++
Sbjct: 87 KLYGLMHNP----PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 132 NR--LVHRDLKPGNIMKFICDDGSTI-YKLTDFGAARELEEDQQFMSLYGTEEYLHPDMY 188
+VHRDL+ NI D+ + + K+ DF +++ L G +++ P+
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ--SVHSVSGLLGNFQWMAPET- 197
Query: 189 ERAVLRKPVG---KTFGATVDLWSIGVTLYHVATGNLPFRPY 227
+G +++ D +S + LY + TG PF Y
Sbjct: 198 --------IGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 26/226 (11%)
Query: 17 VLGKGATGAVFQGVNKNNGE----PVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVK 72
VLG G G V +GV GE PV +K S + + + H +IV+
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 73 LLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE---HLTAGMKHL 129
LL + G +V + GSL + + G Q L+L + GM +L
Sbjct: 80 LLGL---CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ-----LLLNWGVQIAKGMYYL 131
Query: 130 RDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSLYGTEEYLHPDMYE 189
++ +VHR+L N++ + ++ DFG A L D + + LY E P +
Sbjct: 132 EEHGMVHRNLAARNVLL----KSPSQVQVADFGVADLLPPDDKQL-LY--SEAKTPIKW- 183
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGRRNKET 235
A+ GK + D+WS GVT++ + T PY G R E
Sbjct: 184 MALESIHFGK-YTHQSDVWSYGVTVWELMT--FGAEPYAGLRLAEV 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKV--KHENIVKLLA 75
+GKG G V++G GE VAVK F+ R RE E+ V +HENI+ +A
Sbjct: 45 VGKGRYGEVWRG--SWQGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIA 98
Query: 76 IEEEQEGRGKVIVMELCTG----GSLFNILDDPENTYGLQEEEFLLVLEHLTAGMKHLR- 130
+ R + L T GSL++ L L L ++ + +G+ HL
Sbjct: 99 --SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 131 -------DNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGAARELEEDQQFMSL-----YG 178
+ HRDLK NI+ + +G + D G A + + + G
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNIL--VKKNGQCC--IADLGLAVMHSQSTNQLDVGNNPRVG 208
Query: 179 TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVA 218
T+ Y+ P++ + + VD+W+ G+ L+ VA
Sbjct: 209 TKRYMAPEVLDETIQVDCFDSY--KRVDIWAFGLVLWEVA 246
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 29/255 (11%)
Query: 4 LRGSTNYVWCTTSV---LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFE 60
+ G N V V +G+G+ G +F+G N N + VA+K + S + R ++
Sbjct: 1 MSGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYK 60
Query: 61 VLKKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNILDDPENTYGLQEEEFLLVLE 120
+L V QEG V+V++L G SL ++LD + ++ + +
Sbjct: 61 LLAGCTGIPNVYYFG----QEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVK--TVAMAAK 113
Query: 121 HLTAGMKHLRDNRLVHRDLKPGNIM--KFICDDGSTIYKLTDFGAARELEED-------- 170
+ A ++ + + LV+RD+KP N + + + + IY + DFG + +
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIY-VVDFGMVKFYRDPVTKQHIPY 172
Query: 171 QQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLPFRPYGGR 230
++ +L GT Y+ + + +G+ DL ++G + G+LP++
Sbjct: 173 REKKNLSGTARYMSINTH--------LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 224
Query: 231 RNKETMYYITTKKAS 245
NK+ I KK S
Sbjct: 225 TNKQKYERIGEKKQS 239
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 14/125 (11%)
Query: 104 PENTYGLQEEEFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFGA 163
PE+ G + LEHL + + ++HRD+KP N++ I G K+ DFG
Sbjct: 107 PEDILGKIAVSIVKALEHLHSKLS------VIHRDVKPSNVL--INALGQV--KMCDFGI 156
Query: 164 ARELEEDQQFMSLYGTEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+ L +D G + Y+ P+ + +K + D+WS+G+T+ +A P
Sbjct: 157 SGYLVDDVAKDIDAGCKPYMAPERINPELNQK----GYSVKSDIWSLGITMIELAILRFP 212
Query: 224 FRPYG 228
+ +G
Sbjct: 213 YDSWG 217
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 80/268 (29%)
Query: 18 LGKGATGAVFQGVNKNNGEPVAVKTFNQLSHMRPHDVQMREFEVLKKVKHENIVKLL--- 74
+G+G G VF+ NK + A+K + + MRE + L K++H IV+
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 75 ---AIEEEQEGRGKVIVMELCTGGSLFNI--LDDP------------ENTYG-------- 109
E+ QE ++ + + T L + +D P +NT G
Sbjct: 74 LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133
Query: 110 ------------------------LQEEEF---LLVLEHLTAGMKHLRDNRLVHRDLKPG 142
L++ E L + + ++ L L+HRDLKP
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPS 193
Query: 143 NIMKFICDDGSTIYKLTDFGAARELEEDQQ------FMSLY-------GTEEYLHPDMYE 189
NI F DD + K+ DFG +++D++ M Y GT+ Y+ P+
Sbjct: 194 NIF-FTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 190 RAVLRKPVGKTFGATVDLWSIGVTLYHV 217
G + VD++S+G+ L+ +
Sbjct: 250 --------GNNYSHKVDIFSLGLILFEL 269
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 57 REFEVLKKVKHENIVKLLA--IEEEQEGRGKVIVMELCTGGSLFNILDDPENTYG-LQEE 113
RE ++ + H NI++L+A + E +++ G+L+N ++ ++ L E+
Sbjct: 75 READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTED 134
Query: 114 EFLLVLEHLTAGMKHLRDNRLVHRDLKPGNIMKFICDDGSTIYKLTDFG----AARELEE 169
+ L +L + G++ + HRDLKP NI+ + D+G + L D G A +E
Sbjct: 135 QILWLLLGICRGLEAIHAKGYAHRDLKPTNIL--LGDEGQPV--LMDLGSMNQACIHVEG 190
Query: 170 DQQFMSLYG------TEEYLHPDMYERAVLRKPVGKTFGATVDLWSIGVTLYHVATGNLP 223
+Q ++L T Y P+++ +V V D+WS+G LY + G P
Sbjct: 191 SRQALTLQDWAAQRCTISYRAPELF--SVQSHCV---IDERTDVWSLGCVLYAMMFGEGP 245
Query: 224 F 224
+
Sbjct: 246 Y 246
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,557,164
Number of Sequences: 62578
Number of extensions: 862451
Number of successful extensions: 4977
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 602
Number of HSP's that attempted gapping in prelim test: 2540
Number of HSP's gapped (non-prelim): 1150
length of query: 708
length of database: 14,973,337
effective HSP length: 106
effective length of query: 602
effective length of database: 8,340,069
effective search space: 5020721538
effective search space used: 5020721538
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)