BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15484
(1233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VCU9|DCR1_DROME Endoribonuclease Dcr-1 OS=Drosophila melanogaster GN=Dcr-1 PE=1 SV=1
Length = 2249
Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/559 (59%), Positives = 391/559 (69%), Gaps = 78/559 (13%)
Query: 740 VKTEPKSPGKSCEHGIIRNTSTPSDFSFDFQPDLENHTGPSP------------------ 781
++ EP + K+ I+ P+ FSFD QPDL H GPSP
Sbjct: 1687 IEIEPPTSTKAITSAIL-----PAGFSFDRQPDLVGHPGPSPSIILQALTMSNANDGINL 1741
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLETIGDSFLKYAIT +LY TY NVHEGKLSHLRSKQV+N NL++LG++K GE MIAT
Sbjct: 1742 ERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIAT 1801
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
KFEP DNWLPP Y+VPK LE ALIEA P W L ++K LS ++ E++++K L
Sbjct: 1802 KFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLSSVQICEMVREKADAL 1861
Query: 902 DCTVDMNVQS---------------VVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPR 946
+ Q+ +PYNLV+QHSIPDKSIADCVEALIGAYLIECGPR
Sbjct: 1862 GLEQNGGAQNGQLDDSNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPR 1921
Query: 947 GALLFMSWLGLKV---------------IPPVTNPESKHLS------------------- 972
GALLFM+WLG++V IP T P ++++
Sbjct: 1922 GALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPN 1981
Query: 973 -----DVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDY 1027
D LL GF++FEES+ Y+F+D+SYLLQAMTHASY N LTDCYQRLEFLGDA+LDY
Sbjct: 1982 ATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDY 2041
Query: 1028 LITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVK 1087
LITRHLYED R HSPG LTDLRSALVNN IFASLAVR GFH FF+HLSPGL++VI RFV+
Sbjct: 2042 LITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVR 2101
Query: 1088 MQAENDFTL-NQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYY 1146
+Q EN + + Y L E ECD+AED+EVPKALGD+FES+AGAI+LDS MSLD VW VY
Sbjct: 2102 IQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYS 2161
Query: 1147 EIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGIG 1206
+M EIE+ S SVPKSPIRELLELEPE A+F KPEKLADGRRVRVTV+VF KG+++GIG
Sbjct: 2162 NMMSPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIG 2221
Query: 1207 RNYCIAKCTAAKCALKHLK 1225
RNY IAKCTAAKCAL+ LK
Sbjct: 2222 RNYRIAKCTAAKCALRQLK 2240
Score = 546 bits (1406), Expect = e-154, Method: Compositional matrix adjust.
Identities = 294/616 (47%), Positives = 391/616 (63%), Gaps = 55/616 (8%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
+ +AI +VN+YCARLPSD FT+L + + + +F ++RLPINSPLK + G
Sbjct: 822 LGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKHDIVGLP 881
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETY---- 116
MPT+ LA R+AA++AC L+ + ELD+ L P+ KE E PE E
Sbjct: 882 MPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDEQIVQLS 941
Query: 117 ----PDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPP 172
P +TKRRQ+Y+KR+AS F +CRP PCYLY +++ L CPIP+EQN RGRKI+PP
Sbjct: 942 DEPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYLYFIQLTLQCPIPEEQNTRGRKIYPP 1001
Query: 173 ENSPQGLAILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFT 232
E++ QG ILTTK IPK+ +F IFTR GEV+VS+EL + V+L+ E + F++Y FT
Sbjct: 1002 EDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTSEQIVCINGFLNYTFT 1061
Query: 233 KVLKLKKYLMLFDPNCSENSYFIVPTV-SDSEQIVIDWKFMTLISEHHNDVIQDIPEKER 291
VL+L+K+LMLFDP+ +EN FIVPTV + + IDW+F+ LI + N + + +P++ER
Sbjct: 1062 NVLRLQKFLMLFDPDSTENCVFIVPTVKAPAGGKHIDWQFLELIQANGNTMPRAVPDEER 1121
Query: 292 ENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLK 351
+ FD +F+DAVVMPWYRNQ +P YFYVAEI ++ P S FP + Y+TF+ YY +K
Sbjct: 1122 QAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEICPHLSPLSCFPG--DNYRTFKHYYLVK 1179
Query: 352 YGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVP 411
YGL IQN QPLLDVDHTS RLNFLTPRYVNRKG+ L T+SEET+R RE+L +KQ+LVP
Sbjct: 1180 YGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVP 1239
Query: 412 ELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGK-VILDEKVEWPPF 470
ELC +HPFPASLWR +V LP ILYR+N LLLAD+IR V++++GLG+ I DE EWP
Sbjct: 1240 ELCTVHPFPASLWRTAVCLPCILYRINGLLLADDIRKQVSADLGLGRQQIEDEDFEWPML 1299
Query: 471 NFGWKM---------KKLKEKYGWDTKDANDVIVDDTEVNDTKEDDSAVNEICTEIAKVE 521
+FGW + K KE DT + D+ D E T E+ T++ K
Sbjct: 1300 DFGWSLSEVLKKSRESKQKESLKDDTINGKDLA--DVEKKPTSEE--------TQLDKDS 1349
Query: 522 IVDKKETVCDSGNEQENEDEEKLDKIKSDENKTESQGVEPWVEIGTWSNEMAAGVECKPY 581
DK E S E E EEKL Q + ++EIGTWSN+MA +
Sbjct: 1350 KDDKVEK---SAIELIIEGEEKL------------QEADDFIEIGTWSNDMADDIAS--- 1391
Query: 582 PMTPPMFSDDEDSNDD 597
F+ ++D DD
Sbjct: 1392 ------FNQEDDDEDD 1401
>sp|P34529|DCR1_CAEEL Endoribonuclease dcr-1 OS=Caenorhabditis elegans GN=dcr-1 PE=1 SV=3
Length = 1910
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/492 (46%), Positives = 302/492 (61%), Gaps = 51/492 (10%)
Query: 778 GPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGES 837
G S +R ETIGDSFLK+A T +LY T + HEGKLS RSK+VSN NL++LGK+ +
Sbjct: 1409 GMSLERFETIGDSFLKFATTDYLYHTLLDQHEGKLSFARSKEVSNCNLYRLGKKLGIPQL 1468
Query: 838 MIATKFEPRDNWLPPGYF-------------------VPKYLETALIEAGFP-ASLWNCL 877
++A KF+ D+WLPP Y + + L+ +IE + W+
Sbjct: 1469 IVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEIERILDGQVIEEKPENKTGWDIG 1528
Query: 878 SLPNLKELSPEKVLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIG 937
+ + + KQ V D S +PYNL+TQ I DKSIAD VEALIG
Sbjct: 1529 GDVSKSTTDGIETITFPKQARVGNDDI------SPLPYNLLTQQHISDKSIADAVEALIG 1582
Query: 938 AYLIECGPRGALLFMSWLGLKVIPP-------------VTNPESKHLSDVLLDG------ 978
+L+ GP L M+W+GLKVI + P + + S L+
Sbjct: 1583 VHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTNPNASLNFLNNLWQQFQ 1642
Query: 979 FDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDER 1038
F + EE I YRFK+++YL+QA THASY N +T CYQRLEFLGDA+LDY+ITR+L+ED R
Sbjct: 1643 FTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRYLFEDSR 1702
Query: 1039 AHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDF--TL 1096
+SPG LTDLRSALVNN IFASLAV+ F F + PGL+ +I++FVK+ +E +F
Sbjct: 1703 QYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEKFVKLCSERNFDTNF 1762
Query: 1097 NQEYYLM----EGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSE 1152
N E Y++ E + + EDIEVPKA+GD+FESVAGAIYLDSG +LDT W+V + +M+
Sbjct: 1763 NAEMYMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNLDTTWQVIFHMMRGT 1822
Query: 1153 IERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGIGRNYCIA 1212
IE + P+SPIREL+E E RFSK E++ + +VRVTVEV + G+GRNY IA
Sbjct: 1823 IELCCANPPRSPIRELMEFEQSKVRFSKMERILESGKVRVTVEVVNNMRFTGMGRNYRIA 1882
Query: 1213 KCTAAKCALKHL 1224
K TAAK ALK+L
Sbjct: 1883 KATAAKRALKYL 1894
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 281/533 (52%), Gaps = 31/533 (5%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRS-VTGH 59
M AI ++NRYC++LPSDIFTRL P I I+E+ + + LPINSP+K + V +
Sbjct: 568 MSTAIALINRYCSKLPSDIFTRLVPHNQIIPIEENGVTKYCAELLLPINSPIKHAIVLKN 627
Query: 60 KMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFI-NLYENT-EPVVPKTPEIETYP 117
MP K A A+EACR L+ ELD++L+P +E I L E+ E P I
Sbjct: 628 PMPNKKTAQMAVALEACRQLHLEGELDDNLLPKGRESIAKLLEHIDEEPDEYAPGIAAKV 687
Query: 118 DSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQ 177
S+KR+Q Y K++A + C++YA +++ N + RK P N
Sbjct: 688 GSSKRKQLYDKKIARALNESFVEADKECFIYAFELERFREAELTLNPKRRKFEDPFNYEY 747
Query: 178 GLAILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKL 237
L+ K IPK+ FP+F R G ++V + + K ++ L +F +YLFT+VL++
Sbjct: 748 CFGFLSAKEIPKIPPFPVFLRQGNMKVRLIVAPKKTTVTAAQLQEIQLFHNYLFTQVLQM 807
Query: 238 KKYLML-FD--PNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDVIQDIPEKE-R 291
K L FD N N+ IVP D I+ K+++ + + ++ + IP+ E R
Sbjct: 808 CKTGNLEFDGTSNAPLNT-LIVPLNKRKDDMSYTINMKYVSEVVANMENMPR-IPKDEVR 865
Query: 292 ENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLK 351
+ F+ ++DA+VMPWYRN +P ++YVAEI+ P S FP ++TF EY+ K
Sbjct: 866 RQYKFNAEDYKDAIVMPWYRNLEQPVFYYVAEILPEWRPSSKFPD--THFETFNEYFIKK 923
Query: 352 YGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNR----------KGINLATTSEETRREIRE 401
Y L+I + Q LLDVD TS RLN L PR N+ N+ S +E
Sbjct: 924 YKLEIYDQNQSLLDVDFTSTRLNLLQPRIQNQPRRSRTVSNSSTSNIPQASASDSKESNT 983
Query: 402 SL---GKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIR-TAVASEIGLG 457
S+ ++Q+LVPEL IHP A+LW +LPSI YR+N LLL DE+R T + G
Sbjct: 984 SVPHSSQRQILVPELMDIHPISATLWNVIAALPSIFYRVNQLLLTDELRETILVKAFGKE 1043
Query: 458 KVILDEKVEWPPFNFGWKMKKLKE---KYGWDTKDANDVIVDDTEVNDTKEDD 507
K LD+ VEW + + ++ + K +D N ++D E +T+E+D
Sbjct: 1044 KTKLDDNVEWNSLAYATEYEEKQTIIVKKIQQLRDLNQKSIEDQE-RETREND 1095
>sp|Q8R418|DICER_MOUSE Endoribonuclease Dicer OS=Mus musculus GN=Dicer1 PE=1 SV=3
Length = 1916
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/478 (45%), Positives = 293/478 (61%), Gaps = 8/478 (1%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
++ AI +NRYCARLPSD FT LAP E+ + F ++ LPINSPL+ S+ G
Sbjct: 627 INTAIGHINRYCARLPSDPFTHLAPKCRTRELPDG---TFYSTLYLPINSPLRASIVGPP 683
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
M + LA R+ A+ C L+++ ELD LMPV KE + E + + + P ST
Sbjct: 684 MDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 743
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KRRQ Y K + C P + PCYLY + M LT P+PDE N R RK++PPE++ +
Sbjct: 744 KRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 803
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKY 240
ILT K IP++ FP++TR GEV +SIEL LS++ L Y+F+ +L+L+K
Sbjct: 804 ILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSQQMLELITRLHQYIFSHILRLEKP 863
Query: 241 LMLFDPNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDV-IQDIPEKERENFVFD 297
+ F P +E++Y ++P V+DS + ID+KFM I + + I + FVF
Sbjct: 864 ALEFKPTGAESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFVFK 923
Query: 298 ESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQ 357
++DAV++P YRN +P FYVA++ T++ P S FPS Y+TF EYY KY L +
Sbjct: 924 LEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPS--PEYETFAEYYKTKYNLDLT 981
Query: 358 NLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCLIH 417
NL QPLLDVDHTS RLN LTPR++N+KG L +S E R+ ESL KQ+LVPELC IH
Sbjct: 982 NLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIH 1041
Query: 418 PFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWK 475
P PASLWRK+V LPSILYRL+ LL A+E+R AS+ G+G L +P +FGWK
Sbjct: 1042 PIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPVDFRYPNLDFGWK 1099
Score = 363 bits (932), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/384 (52%), Positives = 252/384 (65%), Gaps = 58/384 (15%)
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKV-- 959
+C VD QS+ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LGLKV
Sbjct: 1530 NCGVDTGKQSIS-YDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLP 1588
Query: 960 -------------------------------------------------IPP---VTNPE 967
IPP +P+
Sbjct: 1589 VIKRTSREKALDPAQENGSSQQKSLSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFDHPD 1648
Query: 968 SKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDY 1027
++ + L+ GF+ FE+ INYRFK+K+YLLQA THASY NT+TDCYQRLEFLGDAILDY
Sbjct: 1649 AEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDY 1708
Query: 1028 LITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVK 1087
LIT+HLYED R HSPG LTDLRSALVNN IFASLAV+ +H +FK +SP L VI FVK
Sbjct: 1709 LITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVK 1768
Query: 1088 MQAEND--FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVY 1145
Q E + ++ E E + ++ EDIEVPKA+GD+FES+AGAIY+DSGMSL+ VW+VY
Sbjct: 1769 FQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVY 1828
Query: 1146 YEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGI 1205
Y +M+ IE+ S +VP+SP+RELLE+EPE A+FS E+ DG +VRVTVEV GKG +KG+
Sbjct: 1829 YPMMQPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFKGV 1887
Query: 1206 GRNYCIAKCTAAKCALKHLKSAKP 1229
GR+Y IAK AA+ AL+ LK+ +P
Sbjct: 1888 GRSYRIAKSAAARRALRSLKANQP 1911
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GDSFLK+AIT +L+CTYP+ HEG+LS++RSK+VSN NL++LGK+K M+ +
Sbjct: 1313 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVS 1372
Query: 842 KFEPRDNWLPPGYFV 856
F+P NWLPPGY V
Sbjct: 1373 IFDPPVNWLPPGYVV 1387
>sp|A0MQH0|DICER_CRIGR Endoribonuclease Dicer OS=Cricetulus griseus GN=DICER1 PE=2 SV=3
Length = 1917
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/478 (45%), Positives = 291/478 (60%), Gaps = 8/478 (1%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
++ AI VNRYCARLPSD FT LAP E+ + F ++ LPINSPL+ S+ G
Sbjct: 627 INTAIGHVNRYCARLPSDPFTHLAPKCRTQELPDG---TFYSTLYLPINSPLRASIVGPP 683
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
M LA R+ A+ C L+++ ELD LMPV KE + E + + + P ST
Sbjct: 684 MGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 743
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KRRQ Y K + C P + PCYLY + M LT P+PDE N R RK++PPE++ +
Sbjct: 744 KRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 803
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKY 240
ILT K IP++ FP++TR GEV +SIEL LS++ L Y+F+ +L+L+K
Sbjct: 804 ILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSQQMLELITRLHQYIFSHILRLEKP 863
Query: 241 LMLFDPNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDV-IQDIPEKERENFVFD 297
+ F P +E++Y ++P V+DS + ID+ FM I + + I + FVF
Sbjct: 864 ALEFKPTGAESAYCVLPLNVVNDSSTLDIDFTFMEDIEKSEARIGIPSTKYSKETPFVFK 923
Query: 298 ESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQ 357
++DAV++P YRN +P FYVA++ T++ P S FPS Y+TF EYY KY L +
Sbjct: 924 LEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPS--PEYETFAEYYKTKYNLDLT 981
Query: 358 NLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCLIH 417
NL QPLLDVDHTS RLN LTPR++N+KG L +S E R+ ESL KQ+LVPELC IH
Sbjct: 982 NLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIH 1041
Query: 418 PFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWK 475
P PASLWRK+V LPSILYRL+ LL A+E+R AS+ G+G L +P +FGWK
Sbjct: 1042 PIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGWK 1099
Score = 362 bits (930), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/385 (51%), Positives = 252/385 (65%), Gaps = 59/385 (15%)
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKV-- 959
+C VD QS+ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LGLKV
Sbjct: 1530 NCGVDTGKQSI-SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLP 1588
Query: 960 --------------------------------------------------IPP---VTNP 966
IPP +P
Sbjct: 1589 VIKRTSREKALYPAQENFSSQQKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHP 1648
Query: 967 ESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILD 1026
+++ + L+ GF+ FE+ INYRFK+K+YLLQA THASY NT+TDCYQRLEFLGDAILD
Sbjct: 1649 DAEKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILD 1708
Query: 1027 YLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFV 1086
YLIT+HLYED R HSPG LTDLRSALVNN IFASLAV+ +H +FK +SP L VI FV
Sbjct: 1709 YLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFV 1768
Query: 1087 KMQAEND--FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKV 1144
+ Q E + ++ E E + ++ EDIEVPKA+GD+FES+AGAIY+DSGMSL+ VW+V
Sbjct: 1769 QFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQV 1828
Query: 1145 YYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKG 1204
YY +M+ IE+ S +VP+SP+RELLE+EPE A+FS E+ DG +VRVTVEV GKG +KG
Sbjct: 1829 YYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFKG 1887
Query: 1205 IGRNYCIAKCTAAKCALKHLKSAKP 1229
+GR+Y IAK AA+ AL+ LK+ +P
Sbjct: 1888 VGRSYRIAKSAAARRALRSLKANQP 1912
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GDSFLK+AIT +L+CTYP+ HEG+LS++RSK+VSN NL++LGK+K M+ +
Sbjct: 1313 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVS 1372
Query: 842 KFEPRDNWLPPGYFV 856
F+P NWLPPGY V
Sbjct: 1373 IFDPPVNWLPPGYVV 1387
>sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3
Length = 1922
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/478 (44%), Positives = 294/478 (61%), Gaps = 8/478 (1%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
++ AI +NRYCARLPSD FT LAP E+ + F ++ LPINSPL+ S+ G
Sbjct: 627 INTAIGHINRYCARLPSDPFTHLAPKCRTRELPDG---TFYSTLYLPINSPLRASIVGPP 683
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
M LA R+ A+ C L+++ ELD+ LMPV KE + E + + + P ST
Sbjct: 684 MSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 743
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KRRQ Y K + C + P + PCYLY + M LT P+PDE N R RK++PPE++ +
Sbjct: 744 KRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 803
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKY 240
ILT K IP++ FP++TR GEV +SIEL +LS + L Y+F+ +L+L+K
Sbjct: 804 ILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSLQMLELITRLHQYIFSHILRLEKP 863
Query: 241 LMLFDPNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDV-IQDIPEKERENFVFD 297
+ F P ++++Y ++P V+DS + ID+KFM I + + I + FVF
Sbjct: 864 ALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYTKETPFVFK 923
Query: 298 ESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQ 357
++DAV++P YRN +P FYVA++ T++ P S FPS Y+TF EYY KY L +
Sbjct: 924 LEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPS--PEYETFAEYYKTKYNLDLT 981
Query: 358 NLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCLIH 417
NL QPLLDVDHTS RLN LTPR++N+KG L +S E R+ ESL KQ+LVPELC IH
Sbjct: 982 NLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIH 1041
Query: 418 PFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWK 475
P PASLWRK+V LPSILYRL+ LL A+E+R AS+ G+G L +P +FGWK
Sbjct: 1042 PIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGWK 1099
Score = 363 bits (932), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/386 (52%), Positives = 252/386 (65%), Gaps = 60/386 (15%)
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKV-- 959
+C VD QS+ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LGLKV
Sbjct: 1534 NCGVDTGKQSI-SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLP 1592
Query: 960 ---------------------------------------------------IPP---VTN 965
IPP +
Sbjct: 1593 VIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDH 1652
Query: 966 PESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAIL 1025
P++ + L+ GF+ FE+ INYRFK+K+YLLQA THASY NT+TDCYQRLEFLGDAIL
Sbjct: 1653 PDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAIL 1712
Query: 1026 DYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRF 1085
DYLIT+HLYED R HSPG LTDLRSALVNN IFASLAV+ +H +FK +SP L VI F
Sbjct: 1713 DYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDF 1772
Query: 1086 VKMQAEND--FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWK 1143
V+ Q E + ++ E E + ++ EDIEVPKA+GD+FES+AGAIY+DSGMSL+TVW+
Sbjct: 1773 VQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQ 1832
Query: 1144 VYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYK 1203
VYY +M+ IE+ S +VP+SP+RELLE+EPE A+FS E+ DG +VRVTVEV GKG +K
Sbjct: 1833 VYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFK 1891
Query: 1204 GIGRNYCIAKCTAAKCALKHLKSAKP 1229
G+GR+Y IAK AA+ AL+ LK+ +P
Sbjct: 1892 GVGRSYRIAKSAAARRALRSLKANQP 1917
Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GDSFLK+AIT +L+CTYP+ HEG+LS++RSK+VSN NL++LGK+K M+ +
Sbjct: 1313 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVS 1372
Query: 842 KFEPRDNWLPPGYFV 856
F+P NWLPPGY V
Sbjct: 1373 IFDPPVNWLPPGYVV 1387
>sp|Q6TUI4|DICER_BOVIN Endoribonuclease Dicer OS=Bos taurus GN=DICER1 PE=2 SV=3
Length = 1923
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/478 (45%), Positives = 291/478 (60%), Gaps = 8/478 (1%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
++ AI VNRYCARLPSD FT LAP E+ + F ++ LPINSPL+ S+ G
Sbjct: 626 INTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDG---TFYSTLYLPINSPLRASIVGPP 682
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
M LA R+ A+ C L+++ ELD+ LMPV KE + E + + + P ST
Sbjct: 683 MSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 742
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KRRQ Y K + C P PCYLY + M LT P+PDE N R RK++PPE++ +
Sbjct: 743 KRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 802
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKY 240
ILT K IP++ FP++TR GEV +SIEL LS + L Y+F+ +L+L+K
Sbjct: 803 ILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHILRLEKP 862
Query: 241 LMLFDPNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDV-IQDIPEKERENFVFD 297
+ F P ++++Y ++P V+DS + ID+KFM I + + I + FVF
Sbjct: 863 ALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFVFK 922
Query: 298 ESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQ 357
++DAV++P YRN +P FYVA++ T++ P S FPS Y+TF EYY KY L +
Sbjct: 923 LEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPS--PEYETFAEYYKTKYNLDLT 980
Query: 358 NLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCLIH 417
NL QPLLDVDHTS RLN LTPR++N+KG L +S E R+ ESL KQ+LVPELC IH
Sbjct: 981 NLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIH 1040
Query: 418 PFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWK 475
P PASLWRK+V LPSILYRL+ LL A+E+R AS+ G+G L +P +FGWK
Sbjct: 1041 PIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPVDFRYPNLDFGWK 1098
Score = 360 bits (925), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/386 (52%), Positives = 250/386 (64%), Gaps = 60/386 (15%)
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKV-- 959
+C VD QS+ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LGLKV
Sbjct: 1535 NCGVDTGKQSI-SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLP 1593
Query: 960 ---------------------------------------------------IPP---VTN 965
IPP +
Sbjct: 1594 VIKRTDREKAMCPTRENFTSQQKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDH 1653
Query: 966 PESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAIL 1025
PE+ L+ GF+ FE+ INYRFK+K+YLLQA THASY NT+TDCYQRLEFLGDAIL
Sbjct: 1654 PEADRTLRHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAIL 1713
Query: 1026 DYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRF 1085
DYLIT+HLYED R HSPG LTDLRSALVNN IFASLAV+ +H +FK +SP L VI F
Sbjct: 1714 DYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDF 1773
Query: 1086 VKMQAEND--FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWK 1143
V+ Q E + ++ E E + ++ EDIEVPKA+GD+FES+AGAIY+DSGMSL+TVW+
Sbjct: 1774 VQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQ 1833
Query: 1144 VYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYK 1203
VYY +M+ IE+ S +VP+SP+RELLE+EPE +FS E+ DG +VRVTVEV GKG +K
Sbjct: 1834 VYYPMMRPLIEKFSANVPRSPVRELLEMEPEITKFSPAERTYDG-KVRVTVEVVGKGKFK 1892
Query: 1204 GIGRNYCIAKCTAAKCALKHLKSAKP 1229
G+GR+Y IAK AA+ AL+ LK+ +P
Sbjct: 1893 GVGRSYRIAKSAAARRALRSLKANQP 1918
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 83/174 (47%), Gaps = 32/174 (18%)
Query: 706 SFDNASNPSKNTAILTEILENINKLNTYGSVEKDVKTEPKSPGKSCEHGIIRNTSTPSDF 765
+++N PS +L+ N Y + T SP + G P D
Sbjct: 1224 NYENQPKPSDECTLLS---------NKYLDGNANTSTSDGSPVTAAVPGTTETGEAPPDR 1274
Query: 766 SFDFQ---PDLENHT-GPSP------------------KRLETIGDSFLKYAIT-IFLYC 802
+ Q P + T GP+P +RLE +GDSFLK+AIT + L
Sbjct: 1275 TASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSA 1334
Query: 803 TYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFV 856
+ HEG+LS++RSK+VSN NL++LGK+K M+ + F+P N LPPGY V
Sbjct: 1335 LILDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNGLPPGYVV 1388
>sp|Q25BN1|DICER_CHICK Endoribonuclease Dicer OS=Gallus gallus GN=DICER1 PE=2 SV=3
Length = 1921
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/480 (44%), Positives = 294/480 (61%), Gaps = 12/480 (2%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
++ AI +NRYCARLPSD FT LAP E+ + F ++ LPINSPL+ S+ G
Sbjct: 627 INTAIGHINRYCARLPSDPFTHLAPKCKTRELPDH---TFYSTLYLPINSPLRASIVGPP 683
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
M LA R+ A+ C L+++ ELD+ LMPV KE + E + + + P ST
Sbjct: 684 MSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 743
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KRRQ Y K + C + P + PCYLY + M LT P+PDE N R RK++PPE++ +
Sbjct: 744 KRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 803
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKY 240
ILT K IP++ FP++TR GEV +SIEL LS + L Y+F+ +L+L+K
Sbjct: 804 ILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHILRLEKP 863
Query: 241 LMLFDPNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDVIQDIPEKEREN---FV 295
+ F P ++++Y ++P V DS + ID+KFM I + ++ IP + F+
Sbjct: 864 ALEFKPTEADSAYCVLPLNIVDDSSTLDIDFKFMEDIEK--SEARTGIPSTQYTKEMPFI 921
Query: 296 FDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQ 355
F ++DAV++P YRN +P FYVA++ T++ P S FPS Y+TF EYY KY L
Sbjct: 922 FKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPS--PEYETFAEYYKTKYNLD 979
Query: 356 IQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCL 415
+ NL QPLLDVDHTS RLN LTPR++N+KG L +S E R+ ESL KQ+LVPELC
Sbjct: 980 LTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCA 1039
Query: 416 IHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWK 475
IHP PASLWRK+V LPSILYRL+ LL A+E+R A++ G+G L +P +FGWK
Sbjct: 1040 IHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGVGVKSLPADFRYPNLDFGWK 1099
Score = 363 bits (932), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 230/515 (44%), Positives = 294/515 (57%), Gaps = 95/515 (18%)
Query: 781 PKRLETIGDSFLKYA------ITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVF 834
PK D FL+Y I L + V + LSH + SNY +K K+
Sbjct: 1431 PKEETDFEDDFLEYDQEHIKFIDSMLMGSGAFVKKISLSHFSTTD-SNYE-WKAPKKSSL 1488
Query: 835 GESMIATKFEPRD--NWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLE 892
G ++ F+ D +W Y P A+ E F WN P+
Sbjct: 1489 GNVPFSSDFDDFDYSSWDAMCYLDP---SKAVEEDDFVVGFWN----PS----------- 1530
Query: 893 IIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFM 952
+ +C VD QS+ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+
Sbjct: 1531 -------EENCGVDAGKQSI-SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFL 1582
Query: 953 SWLGLKVIPPV---------------TNPESKHLS------------------------- 972
LGLKV+P + N E K+LS
Sbjct: 1583 CSLGLKVLPVIKKTDWESTLCATGENCNSEQKNLSPNSVSACIVNSEPSLYKDLEYGCLK 1642
Query: 973 ----------------DVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQR 1016
+ L+ GF+ FE+ INY FK+K+YLLQA THASY NT+TDCYQR
Sbjct: 1643 IPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQR 1702
Query: 1017 LEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSP 1076
LEFLGDAILDYLIT+HLYED R HSPG LTDLRSALVNN IFASLAV+ +H +FK +SP
Sbjct: 1703 LEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSP 1762
Query: 1077 GLHEVIQRFVKMQAEND--FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDS 1134
L VI FV+ Q E + ++ E E + ++ EDIEVPKA+GD+FES+AGAIY+DS
Sbjct: 1763 ELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDS 1822
Query: 1135 GMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTV 1194
GMSL+ VW+VYY +M+ IE+ S +VP+SP+RELLE+EPE A+FS E+ DG +VRVTV
Sbjct: 1823 GMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDG-KVRVTV 1881
Query: 1195 EVFGKGSYKGIGRNYCIAKCTAAKCALKHLKSAKP 1229
EV GKG +KG+GR+Y IAK AA+ AL+ LK+ +P
Sbjct: 1882 EVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1916
Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GDSFLK+AIT +L+CTYP+ HEG+LS++RSK+VSN NL++LGK+K M+ +
Sbjct: 1314 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVS 1373
Query: 842 KFEPRDNWLPPGYFV 856
F+P NWLPPGY V
Sbjct: 1374 IFDPPVNWLPPGYIV 1388
>sp|Q6TV19|DICER_DANRE Endoribonuclease Dicer OS=Danio rerio GN=dicer1 PE=2 SV=2
Length = 1865
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/478 (44%), Positives = 292/478 (61%), Gaps = 8/478 (1%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
M+ AI VNRYCARLPSD FT LAP E+ ++ + ++ LPINSPL+ VTG
Sbjct: 613 MNTAIGHVNRYCARLPSDPFTHLAPKCKTVEM---NTGGYRSTLFLPINSPLRVPVTGPV 669
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
M LA + A+ C L+++ ELD+ LMPV KE + E + + + P ST
Sbjct: 670 MNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 729
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KRRQ K + C C P PCYLY + M LT P+PDE N R RK++PPE++ +
Sbjct: 730 KRRQCSPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 789
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKY 240
ILT K IP++ FP++TR GEV +SIEL LS E L Y+F+ +L+L+K
Sbjct: 790 ILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFSLSAEQLELITRLHQYIFSHILRLEKP 849
Query: 241 LMLFDPNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDV-IQDIPEKERENFVFD 297
+ F P ++++Y ++P V DS + +D+KFM I + + I + ++ F+F
Sbjct: 850 ALEFKPVEADSAYCVLPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQYTKQNPFIFK 909
Query: 298 ESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQ 357
++DAV++P YRN +P FYVA++ T++ P S FPS Y+TF EYY KY L +
Sbjct: 910 LEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPS--PEYETFAEYYKTKYNLDLS 967
Query: 358 NLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELCLIH 417
N+ QPLLDVDHTS RLN LTPR++N+KG L +S E R+ ESL KQ+LVPELC IH
Sbjct: 968 NVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIH 1027
Query: 418 PFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNFGWK 475
P PASLWRK+V LPSILYRL+ LL A+E+R+ A + G+G L +P +FGWK
Sbjct: 1028 PIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQTLPPDFRYPNLDFGWK 1085
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/353 (56%), Positives = 250/353 (70%), Gaps = 27/353 (7%)
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIP 961
+C D+ QS+ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LGLKV+P
Sbjct: 1510 NCGTDIGKQSIS-YDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLP 1568
Query: 962 P-----------------------VTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQ 998
P +P+++ + L+ GF FE INY FK+K+YLLQ
Sbjct: 1569 PEKQSSGGSAELQYGWLKIPPRCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQ 1628
Query: 999 AMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIF 1058
A THASY NT+TDCYQRLEFLGDAILDYLIT+HLYED R HSPG LTDLRSALVNN IF
Sbjct: 1629 AFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIF 1688
Query: 1059 ASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAEND--FTLNQEYYLMEGECDEAEDIEVP 1116
ASLAV+ +H +FK +SP L VI FV+ Q E + ++ E E + ++ EDIEVP
Sbjct: 1689 ASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVP 1748
Query: 1117 KALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENA 1176
KA+GD+FES+AGAIY+DSGMSL+TVW+VYY +M+ IE+ S +VP+SP+RELLE+EPE A
Sbjct: 1749 KAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETA 1808
Query: 1177 RFSKPEKLADGRRVRVTVEVFGKGSYKGIGRNYCIAKCTAAKCALKHLKSAKP 1229
+FS E+ DG +VRVTVEV GKG +KG+GR+Y IAK AA+ AL+ LK+ +P
Sbjct: 1809 KFSPAERTYDG-KVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP 1860
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GDSFLK+AIT +L+CTYP+ HEG+LS++RSK+VSN NL++LGK+K M+ +
Sbjct: 1295 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVS 1354
Query: 842 KFEPRDNWLPPGYFV 856
F+P NWLPPGY V
Sbjct: 1355 IFDPPVNWLPPGYVV 1369
>sp|B3DLA6|DICER_XENTR Endoribonuclease Dicer OS=Xenopus tropicalis GN=dicer1 PE=2 SV=2
Length = 1893
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/538 (41%), Positives = 312/538 (57%), Gaps = 15/538 (2%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
++ AI +NRYCARLPSD FT LAP E + ++ ++ LPINSPL+ + G
Sbjct: 618 INTAIGHINRYCARLPSDPFTHLAPKCKTREFPDG---LYRSTLYLPINSPLRAPIVGPP 674
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
M LA R A+ C+ L+E+ ELD+ LMPV KE + E + + + P ST
Sbjct: 675 MNCGRLADRAVALICCKKLHEIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 734
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KRRQ Y K + C N P PCYLY + M LT P+PDE N R RK++PPE++ +
Sbjct: 735 KRRQCYPKAIPECLRNSYPKPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 794
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKY 240
ILT K IP++ FP++TR GEV +SIEL L+ E L Y+F+ +L+L+K
Sbjct: 795 ILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLNLEQLELITRLHQYIFSHILRLEKP 854
Query: 241 LMLFDPNCSENSYFIVP--TVSDSEQIVIDWKFMTLISEHHNDVIQDIPEKE---RENFV 295
+ F P ++ +Y ++P V+DS + ID+KF+ I + ++ IP + F+
Sbjct: 855 ALEFKPTVADCAYCVLPLNVVNDSGTLDIDFKFVEDIEK--SEARTGIPNTQYSAESPFI 912
Query: 296 FDESKFRDAVVMP---WYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKY 352
F ++DAV++P YRN +P FYVA++ T++ P S FPS Y+TF EYY KY
Sbjct: 913 FKLEDYQDAVIIPRQVIYRNFDQPHRFYVADVYTDLTPLSKFPS--PEYETFAEYYKTKY 970
Query: 353 GLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPE 412
L + NL QPLLDVDHTS RLN LTPR++N+KG L +S E R+ ESL KQ+LVPE
Sbjct: 971 NLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPE 1030
Query: 413 LCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGKVILDEKVEWPPFNF 472
LC IHP PASLWRK+V LPSILYRL+ LL A+E+R A + G+G L + +P +F
Sbjct: 1031 LCAIHPVPASLWRKAVCLPSILYRLHCLLTAEELRAQTAIDAGVGVKSLPDDFRYPNLDF 1090
Query: 473 GWKMKKLKEKYGWDTKDANDVIVDDTEVNDTKEDDSAVNEICTEIAKVEIVDKKETVC 530
GWK + + + ++ D +N T DSA + + ++I D+ C
Sbjct: 1091 GWKRSIDSKTFISNQSSSSVESESDCRLNKTTAPDSAASSAANSVIYMQINDQMSVNC 1148
Score = 359 bits (922), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 200/380 (52%), Positives = 249/380 (65%), Gaps = 57/380 (15%)
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIP 961
+C D QS+ Y+L T+ I DKSIADCVEAL+G YL CG R A LF+ LGLKV+P
Sbjct: 1508 NCGADAGKQSI-SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLP 1566
Query: 962 P----VTN-------------------------------------------------PES 968
VTN P++
Sbjct: 1567 EVRKLVTNTNVISASSSYQNSTRDNCTLTARTNTDLSSCKGIDYGYLKIPPRCMFEHPDA 1626
Query: 969 KHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYL 1028
+ D L+ GF+ FE+ INY FK+K+YLLQA THASY NT+TDCYQRLEFLGDAILDYL
Sbjct: 1627 EKTLDHLISGFENFEKKINYPFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYL 1686
Query: 1029 ITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKM 1088
IT+HLYED R HSPG LTDLRSALVNN IFASLAV+ +H +FK +SP L VI FV+
Sbjct: 1687 ITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQF 1746
Query: 1089 QAEND--FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYY 1146
Q E + ++ E E + ++ EDIEVPKA+GD+FES+AGAIY+DSGMSL+TVW VYY
Sbjct: 1747 QLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYY 1806
Query: 1147 EIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGIG 1206
+M+ IE+ S +VP+SP+RELLE+EPE A+FS E+ DG +VRVTVEV GKG +KG+G
Sbjct: 1807 PMMQPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDG-KVRVTVEVVGKGKFKGVG 1865
Query: 1207 RNYCIAKCTAAKCALKHLKS 1226
R+Y IAK AA+ AL+ LK+
Sbjct: 1866 RSYRIAKSAAARRALRSLKA 1885
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 99/173 (57%), Gaps = 27/173 (15%)
Query: 690 VENTIKENQPV---HIVRQSFDNASNPSKN---TAILTEILENINKLNTYGSVEKDVKTE 743
V+N KENQP+ + S N S P+ + + +++ + N + S KT
Sbjct: 1213 VQNLPKENQPILKECTLSNSDGNVSKPTSDECPSTCTSDMHYDSGLSNRHSS-----KTL 1267
Query: 744 PKSPGKSCEHGIIRNTSTPSDFSFDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCT 803
+PG +I T S+ S F +LE RLE +GDSFLK+AIT +L+CT
Sbjct: 1268 GPNPG------LILQALTLSNASDGF--NLE--------RLEMLGDSFLKHAITTYLFCT 1311
Query: 804 YPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFV 856
YP+ HEG+LS++RSK+VSN NL++LGK+K M+ + F+P NWLPPGY V
Sbjct: 1312 YPDAHEGRLSYMRSKKVSNCNLYRLGKKKGSPSRMVVSIFDPPVNWLPPGYIV 1364
>sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1
SV=2
Length = 1909
Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 230/438 (52%), Gaps = 47/438 (10%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+R E +GD++LK+ ++ FL+ YP HEG+L+ +R + VSN L++ K + A
Sbjct: 1375 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQAD 1434
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
+F P W PG VP + + G +S ++ P +E S V E + + +L
Sbjct: 1435 RFAP-SRWSAPG--VPPVFDEDTKDGG--SSFFDEEQKPVSEENS--DVFEDGEMEDGEL 1487
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKV-- 959
+ +L + + K++AD VEALIG Y +E G A M W+G+ V
Sbjct: 1488 EG------------DLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVED 1535
Query: 960 --------IPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLT 1011
+ V PES S +D F E ++ Y FK+K L++A+THAS + ++
Sbjct: 1536 DPDEVDGTLKNVNVPESVLKS---ID-FVGLERALKYEFKEKGLLVEAITHASRPSSGVS 1591
Query: 1012 DCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFF 1071
CYQRLEF+GDA+LD+LITRHL+ + PG LTDLR+A VNN FA +AV+ H +
Sbjct: 1592 -CYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYL 1650
Query: 1072 KHLSPGLHEVIQRFVK-MQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAI 1130
+H S L + I+ FVK +Q E+ + L G+C + PK LGD+ ES+AGAI
Sbjct: 1651 RHGSSALEKQIREFVKEVQTESSKPGFNSFGL--GDC------KAPKVLGDIVESIAGAI 1702
Query: 1131 YLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRV 1190
+LDSG WKV+ +++ + ++P P+REL E + A + + G
Sbjct: 1703 FLDSGKDTTAAWKVFQPLLQPMV--TPETLPMHPVRELQERCQQQAEGLEYKASRSGN-- 1758
Query: 1191 RVTVEVFGKGSYKGIGRN 1208
TVEVF G G+ +N
Sbjct: 1759 TATVEVFIDGVQVGVAQN 1776
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 319 FYVAEIMTNVHPRSMFPSRTN-----TYQTFEEYYSLKYGLQIQNLEQPLLDVDHTSCRL 373
FYV I ++ + FP + Y T+ +YY KYG+ + +QPL+ S
Sbjct: 1225 FYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCK 1284
Query: 374 NFLTPRYVNRKGINLATTSEETRREIRESLGKKQ--LLVPELCLIHPFPASLWRKSVSLP 431
N L+PR+ E E L K L PELC++HP SL R + LP
Sbjct: 1285 NLLSPRF-------------EQSGESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQRLP 1331
Query: 432 SILYRLNALLLADEIRTAVASEIGLGKVI 460
SI+ R+ ++LLA +++ ++ I K++
Sbjct: 1332 SIMRRVESMLLAVQLKNLISYPIPTSKIL 1360
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 994 SYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALV 1053
S +L+A+T AS T CY+R E LGDA L ++++R L+ G LT +R +V
Sbjct: 1357 SKILEALTAASC---QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1413
Query: 1054 NNIIFASLAVRLGFHHFFKH--------LSPGLHEVIQRFVKMQAENDFTLNQEYYLMEG 1105
+N++ A+ G + + +PG+ V K + F Q+ E
Sbjct: 1414 SNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQKPVSEEN 1473
Query: 1106 ----ECDEAEDIEV-----------PKALGDLFESVAGAIYLDSG 1135
E E ED E+ K L D+ E++ G Y++ G
Sbjct: 1474 SDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGG 1518
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEI-KEDDSIMFTCSIRLPINSPLKRSVTGH 59
+++A+ +V+ YC++LP D + L P ++ + K ++C ++LP N+P + + G
Sbjct: 837 LNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE-ILEGP 895
Query: 60 KMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDS 119
+ LA + + AC+ L+E+ + L+P + + + E E P +
Sbjct: 896 VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEK-----ADQDDEGEPVPGT 950
Query: 120 TKRRQFYHKRMASCFTN---------CRPSVNTPCYLYAVK 151
+ R+FY + +A C S Y+Y V+
Sbjct: 951 ARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVR 991
>sp|Q8LMR2|DCL1_ORYSJ Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica
GN=DCL1 PE=3 SV=1
Length = 1883
Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 230/482 (47%), Gaps = 82/482 (17%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+R E +GD++LK+ ++ FL+ YP HEG+L+ +R + VSN L++ K + A
Sbjct: 1353 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQAD 1412
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
+F P W PG LP E S E I ++
Sbjct: 1413 RFAP-SRWAAPGV------------------------LPVFDEESREYEPSIFDEESTGC 1447
Query: 902 --------DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMS 953
D +M + + + K++AD VEALIG Y + G A M
Sbjct: 1448 ELQKESYDDYADNMQEDGEIEGDSSCYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMK 1507
Query: 954 WLGLKV------IPPVTNPESKHLSDVLLDG--FDKFEESINYRFKDKSYLLQAMTHASY 1005
W+G+ IPP P+ + + ++ FD + + F++K L++A+THAS
Sbjct: 1508 WIGIHAELDPEEIPP---PKPYDIPESIMRSINFDTLKGVLGIEFQNKGLLVEAITHASR 1564
Query: 1006 FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRL 1065
+ ++ CYQRLEF+GDA+LD+LITRHL+ PG LTDLR+A VNN FA +AV+
Sbjct: 1565 PSSGVS-CYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKH 1623
Query: 1066 GFHHFFKHLSPGLHEVIQRFVK-MQAE------NDFTLNQEYYLMEGECDEAEDIEVPKA 1118
H +H S L I+ FVK +Q E N F L G+C + PK
Sbjct: 1624 KLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFGL--------GDC------KAPKV 1669
Query: 1119 LGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENA-- 1176
LGD+ ES+AGAI+LDSG VWKV+ ++ + ++P P+REL E + A
Sbjct: 1670 LGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMV--TPETLPMHPVRELQERCQQQAEG 1727
Query: 1177 ---RFSKPEKLADGRRVRVTVEVFGKGSYKGIGRN--YCIAKCTAAKCALKHLKSAKPAD 1231
+ S+ +A TVEVF G G+ +N +A+ AA+ AL LK + A
Sbjct: 1728 LEYKASRAGNIA-------TVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEKETAT 1780
Query: 1232 VK 1233
K
Sbjct: 1781 KK 1782
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 16/136 (11%)
Query: 319 FYVAEIMTNVHPRSMFPSRTN-----TYQTFEEYYSLKYGLQIQNLEQPLLDVDHTSCRL 373
FYV I N++ + FP + Y ++ +YY KYG+++ +QPL+ S
Sbjct: 1199 FYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELIYRKQPLIRARGVSYCK 1258
Query: 374 NFLTPRYVNRKGINLATTSEETRREIRESLGKKQL--LVPELCLIHPFPASLWRKSVSLP 431
N L+PR+ + S+ + E+L K L PELCL+HP P SL R + LP
Sbjct: 1259 NLLSPRFEH---------SDAREGDFSENLDKTYYVYLPPELCLVHPLPGSLVRGAQRLP 1309
Query: 432 SILYRLNALLLADEIR 447
SI+ R+ ++LLA +++
Sbjct: 1310 SIMRRVESMLLAVQLK 1325
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEI-KEDDSIMFTCSIRLPINSPLKRSVTGH 59
+++A+ +++ YC++LPSD ++ L P + + K S+ ++C ++LP N+P ++ + G
Sbjct: 814 LNSAVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEK-LEGP 872
Query: 60 KMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDS 119
+ LA + + AC+ L+E+ + L+P E TE + E E P +
Sbjct: 873 ICSSIRLAQQAVCLAACKKLHEMGAFTDTLLP--DRGSGEGEKTE----QNDEGEPLPGT 926
Query: 120 TKRRQFYHKRMA 131
+ R+FY + +A
Sbjct: 927 ARHREFYPEGVA 938
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 996 LLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNN 1055
+L+A+T AS T CY+R E LGDA L ++++R L+ G LT +R +V+N
Sbjct: 1337 ILEALTAASC---QETLCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1393
Query: 1056 IIFASLAV 1063
++ A+
Sbjct: 1394 MVLYQYAL 1401
>sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300
PE=1 SV=2
Length = 1388
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 197/389 (50%), Gaps = 56/389 (14%)
Query: 784 LETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKF 843
LET+GDSFLKYA+ L+ HEG LS + +SN L + G Q+ + F
Sbjct: 997 LETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECF 1056
Query: 844 EPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDLDC 903
EP+ W+ PG Y +L+ P S
Sbjct: 1057 EPK-GWMVPGQSSAAY---SLVNDTLPES------------------------------- 1081
Query: 904 TVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIPPV 963
N+ + ++ ++ KS+AD VE+LIGAYL E G AL+FM+W+G+KV
Sbjct: 1082 ---RNIY------VASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTT 1132
Query: 964 TNPESKH-LSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGD 1022
T + + L E +NY F+DKS L++A+TH SY + + CYQRLEFLGD
Sbjct: 1133 TKIQRDSPIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGD 1192
Query: 1023 AILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVI 1082
++LDYLIT+HLY+ SPG LTD+RSA VNN +A +AV+ H + S LH+ I
Sbjct: 1193 SVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHI 1252
Query: 1083 QRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVW 1142
R V ++F E ++ DI PK LGD+ ES+AGAI++DSG + + V+
Sbjct: 1253 SRTV-----SEF----EQSSLQSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVF 1303
Query: 1143 KVYYEIMKSEIERLSVSVPKSPIRELLEL 1171
++ I +V + P+REL EL
Sbjct: 1304 ASIKPLLGCMITPETVKL--HPVRELTEL 1330
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 209/475 (44%), Gaps = 86/475 (18%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
+ +++ ++ YC+RLPSD + + AP ++ +D +C++ LP + P+K +
Sbjct: 556 LSSSVSLIYHYCSRLPSDEYFKPAPRF---DVNKDQG---SCTLYLPKSCPVKE--VKAE 607
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKT--PEIETYPD 118
K+L + ++AC L+++ L + L+P + VV +T ++E
Sbjct: 608 ANNKVLKQAVC-LKACIQLHKVGALSDHLVP------------DMVVAETVSQKLEKIQY 654
Query: 119 STKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQG 178
+T++ ++ + S F+ +P T + Y ++MK P R H +
Sbjct: 655 NTEQPCYFPPELVSQFS-AQP--ETTYHFYLIRMKPNSP---------RNFHLND----- 697
Query: 179 LAILTTKYIPK----VCSFPIFTRCGEVEVSIELIDKNVVLSEENL-----SNTL--IFM 227
+L T+ + + SF + G + V++ + + EE L TL + +
Sbjct: 698 -VLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLL 756
Query: 228 DYLFTKVLKLKKYLMLFDPNCSENSYFIVPTVSDSEQIVIDWKFMTLIS-------EHHN 280
D+ +++ L L D + Y +VP+ E +IDW+ + ++ E H
Sbjct: 757 DHSVENLMEALNGLHLRDGVALD--YLLVPSTHSHETSLIDWEVIRSVNLTSHEVLEKHE 814
Query: 281 DVIQDIPEK--ERENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRT 338
+ + + ++ +F ++A+V + Y Y + + N + ++
Sbjct: 815 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNG-----YVYCTKGVLNNLNGNSLLTKR 869
Query: 339 NTY-QTFEEYYSLKYGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRR 397
N+ QT+ EYY ++G+Q+ +++PLL+ H ++L ++ +K +E R
Sbjct: 870 NSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYL---HMAKK-----KKEKEHDR 921
Query: 398 EIRESLGKKQLLVPELC--LIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAV 450
E E L PELC ++ P + +PS++ R+ +LL+A ++ ++
Sbjct: 922 EFVE-------LPPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKKSI 969
Score = 39.7 bits (91), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSN 822
+RLE +GDS L Y IT LY YP + G L+ +RS V+N
Sbjct: 1185 QRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNN 1225
>sp|Q7XD96|DCL3B_ORYSJ Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica
GN=DCL3B PE=2 SV=2
Length = 1637
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 205/424 (48%), Gaps = 45/424 (10%)
Query: 780 SPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMI 839
S +RLE +GDS LKY + L+ YP HEG+LS +RSK V N L K G + +
Sbjct: 1063 SLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVR 1122
Query: 840 ATKFEPRDNWLPPGYFVPK-YLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKC 898
F+PR W+ PG + + IE F +P+ + + + + C
Sbjct: 1123 DNAFDPR-RWVAPGQISLRPFPCNCGIETAF---------VPSHRRYIRDDPSFFVGKPC 1172
Query: 899 VDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLG-- 956
D + K+I+DCVEAL+GAY + G AL M W G
Sbjct: 1173 -------DRG-----------HRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGID 1214
Query: 957 ----LKVIPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTD 1012
+K++ V S S ++ ++ E + Y F K LL+A+TH S +
Sbjct: 1215 IKCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDY 1274
Query: 1013 CYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFK 1072
CYQRLEFLGD++LD L+TRHLY PG LTDLRSALV+N FA VR H +
Sbjct: 1275 CYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQ 1334
Query: 1073 HLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYL 1132
H S L E I +V+ N E E E + +VPK LGD+ ES+AGA+++
Sbjct: 1335 HGSGILLEQITEYVRS--------NLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFI 1386
Query: 1133 DSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRV 1192
D+ ++D VW+++ ++ I +++P P RELLEL F + + G V +
Sbjct: 1387 DTDFNVDMVWEIFEPLLSPLITPDKLALP--PYRELLELCSHIGCFLNSKCTSKGEEVII 1444
Query: 1193 TVEV 1196
+ +
Sbjct: 1445 EMSL 1448
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 201/491 (40%), Gaps = 71/491 (14%)
Query: 2 DNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKM 61
D + ++ +YC +LP D + P E+ +D +F C++ LP N+ + S+ G
Sbjct: 579 DCCVNLIRKYCEKLPKDRYFMPKPSF---EVTIEDG-LFKCTLTLPRNAAFQ-SIVGPLS 633
Query: 62 PTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDSTK 121
+ L+ ++ ++EAC+ L++L EL++ L+P+T+E ++ T + + P +TK
Sbjct: 634 SSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTT-----ADEKCISGPGTTK 688
Query: 122 RRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPE----NSPQ 177
R++ + + + L ++ C E + PE +P
Sbjct: 689 RKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDDDVAPS 748
Query: 178 GLAILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKL 237
+ + IP + T G+V+++ + + K + E F + +F ++
Sbjct: 749 KMDLF---LIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQE-------FFFNGIFGRLFHG 798
Query: 238 KKYL-----MLFDPNC-----SENSYFIVPTVSDS---EQIVIDWKFM--------TLIS 276
+ +F +E+ Y ++P S + + I W+ + L S
Sbjct: 799 SRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWS 858
Query: 277 EHHNDV----IQDIPEKER---------ENFVFDESKFRDAVVMPWYRNQFEPTYFYVAE 323
+ D + IP+K R N S +D+VV+ + + + +
Sbjct: 859 SYQGDENVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILD 918
Query: 324 IMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQNLEQPLLDV--DHTSCRLNFLTPRYV 381
M + + + +F +YY KYG+ IQ+ EQPLL + H + L F +Y+
Sbjct: 919 TTAEDSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYL 978
Query: 382 N-RKGINLATTSEETRREIRESLGKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNAL 440
+ G L E+ + PEL + + + LPS+++RL +L
Sbjct: 979 DGSTGKPLLMEKEQIHARVP----------PELLIHLDVTTDILKSFYLLPSVIHRLQSL 1028
Query: 441 LLADEIRTAVA 451
+LA ++R +
Sbjct: 1029 MLASQLRREIG 1039
>sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica
GN=DCL3A PE=2 SV=1
Length = 1651
Score = 196 bits (499), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 208/428 (48%), Gaps = 54/428 (12%)
Query: 780 SPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMI 839
S +RLE +GDS LKYA++ L+ +PN EG+LS +R + N L+KLG ++ +
Sbjct: 1064 SMERLELLGDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVR 1123
Query: 840 ATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCV 899
F+PR WL PG + S C P E+ + + II K +
Sbjct: 1124 DAAFDPR-RWLAPG------------QLSIRPSPCEC---PVKSEVVTDDI-HIIDDKAI 1166
Query: 900 DLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKV 959
L D + K+IADCVEA+IGAY G R A+ + WLG+
Sbjct: 1167 VLGKACDKG-----------HRWMCSKTIADCVEAIIGAYYAGGGLRAAMAVLKWLGIG- 1214
Query: 960 IPPVTNPESKHLSDVLLDG-----------FDKFEESINYRFKDKSYLLQAMTHASYFLN 1008
E + +L F+ E + Y F K L++A+TH S
Sbjct: 1215 ----AEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQEL 1270
Query: 1009 TLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFH 1068
CY+RLEFLGDA+LD L+TR+L+ + + G LTDLRSA VNN FA +AV+ FH
Sbjct: 1271 GAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNFH 1330
Query: 1069 HFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAG 1128
HF +H S L + I +V + ++++ L +G + PK LGD+ ES+AG
Sbjct: 1331 HFLQHSSGLLLDQITEYVNRLEGS--SMDKVELLSDGL------PKGPKVLGDIVESIAG 1382
Query: 1129 AIYLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGR 1188
AI LD+ + LD VW ++ ++ + ++ +P P REL+E ++ F G
Sbjct: 1383 AILLDTKLDLDVVWGIFEPLLSPIVTPENLELP--PYRELIEWCGKHGYFVGINCRDQGD 1440
Query: 1189 RVRVTVEV 1196
V T++V
Sbjct: 1441 TVVATLDV 1448
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 204/486 (41%), Gaps = 63/486 (12%)
Query: 2 DNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKM 61
D++I IV RYC +LP D +P T DD + C++ LP ++ L+ V G K
Sbjct: 585 DSSISIVYRYCEKLPQD--KCYSPKPTFEFTHHDDG--YVCTLALPPSAVLQILV-GPKA 639
Query: 62 PTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDSTK 121
A ++ ++AC+ L+EL LD+ L +++ + +V K T +TK
Sbjct: 640 RNMHKAKQLVCLDACKKLHELGALDDHLC------LSVEDPVPEIVSKNKG--TGIGTTK 691
Query: 122 RRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRK--IHPPENSPQGL 179
R++ + ++ S T L + KM C D+ + + + P +
Sbjct: 692 RKELHGTTRIHAWSGNWVSKKTALKLQSYKMNFVC---DQAGQIYSEFVLLIDATLPDEV 748
Query: 180 AILTTK-YIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLK 238
A L Y+ + CG +E+ + +++ L + L N L + +KV
Sbjct: 749 ATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQ-AKLFQGLLFNGLFGKLFTRSKVPNAP 807
Query: 239 KYLMLFDPNC----SENSYFIVPT-VSDSEQIVIDWKFMTLISEHHNDVIQDIPEKEREN 293
+ +L + + + Y ++PT S + I+W + + + + E +RE
Sbjct: 808 REFILNKEDTFVWNTASVYLLLPTNPSFDSNVCINWSVIDAAATAVKLMRRIYSENKREL 867
Query: 294 F-VFDESK-----------------FRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFP 335
+FD + +D VV+ + + Y A +T + S F
Sbjct: 868 LGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKI-----YTALDITELSGDSAFD 922
Query: 336 SRTNT----YQTFEEYYSLKYGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGI--NLA 389
++ ++TF EY+ KYG+ +++ QPLL + + N L+ ++ + + N++
Sbjct: 923 GASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDEGNVVENMS 982
Query: 390 TTSEETRREIRESLGKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTA 449
+ + + + PEL + P + R P+++YR+ +L LA ++R
Sbjct: 983 NGT-----PVVNKTSNRVHMPPELLIPLDLPVEILRSFYLFPALMYRIESLTLASQLR-- 1035
Query: 450 VASEIG 455
SEIG
Sbjct: 1036 --SEIG 1039
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 87/222 (39%), Gaps = 38/222 (17%)
Query: 1015 QRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKH- 1073
+RLE LGD++L Y ++ HL+ G L+ +R ++ N L + + +
Sbjct: 1066 ERLELLGDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVRDA 1125
Query: 1074 -------LSPGLHEV----IQRFVKMQAEND--FTLNQEYYLMEGECDEAEDIEVPKALG 1120
L+PG + + VK + D ++ + ++ CD+ K +
Sbjct: 1126 AFDPRRWLAPGQLSIRPSPCECPVKSEVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIA 1185
Query: 1121 DLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIER-------LSVSV----PKSPIRELL 1169
D E++ GA Y G+ + I +EIE LS SV PK + E+L
Sbjct: 1186 DCVEAIIGAYYAGGGLRAAMAVLKWLGI-GAEIEEDLIVQAILSASVQTYLPKDNVFEML 1244
Query: 1170 ELEPENARFSKPEKLADGRRVR-VTVEVFGKGSYKGIGRNYC 1210
E KL V+ + VE S + +G YC
Sbjct: 1245 E-----------AKLGYSFSVKGLLVEALTHPSQQELGAKYC 1275
>sp|P84634|DCL4_ARATH Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2
Length = 1702
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 199/402 (49%), Gaps = 50/402 (12%)
Query: 776 HTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFG 835
H S +RLE +GD+FLK+A++ L+ + ++ EG+L+ RS V+N NL +L +K
Sbjct: 1113 HERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNL- 1171
Query: 836 ESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIK 895
+ RD L P T G P + C + + + S + L I++
Sbjct: 1172 ------QVYIRDQALDP---------TQFFAFGHPCRV-TCDEVASKEVHSLNRDLGILE 1215
Query: 896 QKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWL 955
++ C+ H + K+IAD VEAL+GA+L++ G +GA+ F+ W+
Sbjct: 1216 SNTGEIRCSKG-------------HHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWI 1262
Query: 956 GLKV------IPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNT 1009
G+ V + ++L + + E ++Y+F K L+QA H SY +
Sbjct: 1263 GVNVDFESLQVQDACIASRRYLPLTTRNNLETLENQLDYKFLHKGLLVQAFIHPSYNRHG 1322
Query: 1010 LTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHH 1069
CYQRLEFLGDA+LDYL+T + + PG LTDLRS VNN A++AV
Sbjct: 1323 -GGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKR 1381
Query: 1070 FFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGA 1129
F S LHEVI+ + A + Q +E PK LGDL ES GA
Sbjct: 1382 FLFCESIYLHEVIEDYTNFLASSPLASGQ-----------SEGPRCPKVLGDLVESCLGA 1430
Query: 1130 IYLDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLEL 1171
++LD G +L+ VW + + ++ LS ++ SPI+EL+EL
Sbjct: 1431 LFLDCGFNLNHVWTMMLSFL-DPVKNLS-NLQISPIKELIEL 1470
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 769 FQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKL 828
P H G +RLE +GD+ L Y +T + + +P + G+L+ LRS V+N L +
Sbjct: 1314 IHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANV 1373
Query: 829 G-----KQKVFGESM 838
K+ +F ES+
Sbjct: 1374 AVSFSLKRFLFCESI 1388
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 3 NAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMP 62
++I ++ +YC+RLP D F + P + E + C I LP N+P+ + +P
Sbjct: 655 SSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI--CRITLPANAPISE-IESSLLP 711
Query: 63 TKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFI 97
+ A + A ++A L+ L L++ L+P +K+ I
Sbjct: 712 STEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEI 746
>sp|Q69LX2|DCL2B_ORYSJ Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica
GN=DCL2B PE=2 SV=2
Length = 1377
Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 205/453 (45%), Gaps = 70/453 (15%)
Query: 780 SPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMI 839
S + LET+GDSFLKY T L+ Y HEG L+ ++ +SN L +L +
Sbjct: 975 SQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIH 1034
Query: 840 ATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCV 899
A +F PRD W+ P C+
Sbjct: 1035 AEEFNPRD-WIIP---------------------------------------------CL 1048
Query: 900 DLDCTVDMNVQSVVPYNLVTQH--SIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGL 957
D D + + + P + +Q SI K IAD VEALIGAYL G + A L M LG+
Sbjct: 1049 DYDERGNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGM 1108
Query: 958 KVIPPVTNPESKHLSDVLLDGFD--KFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQ 1015
+ P + +S + D E + Y+F D LL+A+TH SY + T CYQ
Sbjct: 1109 NIEFHTEIPVERKISMKAEEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQ 1168
Query: 1016 RLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLS 1075
RLEFLGDAILD+L T + Y +P LTDLRSA VNN +A AV+ G + H S
Sbjct: 1169 RLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSS 1228
Query: 1076 PGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSG 1135
LH + ++ FT Y G I +PK LGD+ ES+AGAIYLDS
Sbjct: 1229 SELHRKMSYYLG----QSFT-GPSYGWEAG-------IGLPKVLGDVIESIAGAIYLDSK 1276
Query: 1136 MSLDTVWKVYYEIMKSEIERLSV--SVPKSPIRELLEL-EPENARFSKPEKLADGRRVRV 1192
+ VW+ MK +E L+ ++ P++ L E + + + + + DG +
Sbjct: 1277 CDKEVVWRS----MKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVI 1332
Query: 1193 TVEVFGKGSYKGIGRNYC-IAKCTAAKCALKHL 1224
G+ +Y C +AK A+K LK L
Sbjct: 1333 ARVKAGETTYSATKSGPCKLAKKLASKAVLKDL 1365
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 37/215 (17%)
Query: 253 YFIVPTVSDSEQIVIDWKFMTLISE----------HHNDVIQDIPEKERENFVFDESKFR 302
Y ++P VS IDW M S H +DI + ++ F +
Sbjct: 761 YLLLPLVSGR----IDWCSMKFSSSPIYEANNKHMTHCHSCRDIDLLQTKDGPFCRCILK 816
Query: 303 DAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGLQIQNLEQP 362
+++V + N FYV ++ S P T T+++Y+ ++GL + QP
Sbjct: 817 NSIVCTPHNN-----IFYVISGFLDLDANSRLPQHDGTVVTYKDYFKTRHGLTLTFENQP 871
Query: 363 LL-DVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELC--LIHPF 419
LL H R NFL Y ++ E R E L PELC ++ P
Sbjct: 872 LLAGSKHVKVR-NFLHNYYYKKE-------KEPGDRYSVE-------LPPELCRIIMSPV 916
Query: 420 PASLWRKSVSLPSILYRLNALLLADEIRTAVASEI 454
A+ +PSI++R+ +LL+ +++ + +
Sbjct: 917 SANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTV 951
Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 777 TGPSP--KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSN 822
+GP+ +RLE +GD+ L + T + Y YP+ L+ LRS V+N
Sbjct: 1161 SGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNN 1208
>sp|Q9LXW7|DCL3_ARATH Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana GN=DCL3 PE=1
SV=2
Length = 1580
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 203/425 (47%), Gaps = 53/425 (12%)
Query: 780 SPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMI 839
S +RLE +GDS LKY + L+ YP+ EG+LS R +SN NL +L + +
Sbjct: 1020 SMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIR 1079
Query: 840 ATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKE--LSPEKVLEIIKQK 897
FEPR W PG F + FP C + +E L P+ E
Sbjct: 1080 NGAFEPR-RWTAPGQF-----------SLFPVP---CKCGIDTREVPLDPKFFTE---NM 1121
Query: 898 CVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGL 957
+ + + DM + VV KS++DC EALIGAY + G +L M WLG+
Sbjct: 1122 TIKIGKSCDMGHRWVV-----------SKSVSDCAEALIGAYYVSGGLSASLHMMKWLGI 1170
Query: 958 KV------IPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLT 1011
V + N S D + E I + F K L +A+TH+S +
Sbjct: 1171 DVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSSL---RES 1227
Query: 1012 DCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFF 1071
Y+RLEFLGD++LD+LITRHL+ PG +TDLRSA VNN FA +AV+ H
Sbjct: 1228 YSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHL 1287
Query: 1072 KHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIY 1131
+ + L I ND+ ++ + G I+ PKALGD+ ES+AGA+
Sbjct: 1288 QRCATVLETQI---------NDYLMSFQKPDETGR--SIPSIQGPKALGDVVESIAGALL 1336
Query: 1132 LDSGMSLDTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVR 1191
+D+ + LD VW+V+ ++ + + +P P REL EL F + + DG + +
Sbjct: 1337 IDTRLDLDQVWRVFEPLLSPLVTPDKLQLP--PYRELNELCDSLGYFFRVKCSNDGVKAQ 1394
Query: 1192 VTVEV 1196
T+++
Sbjct: 1395 ATIQL 1399
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 293 NFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFP-SRTNTYQTFEEYYSLK 351
N D++ + VV+ + + + + E +++ S F ++ Y T+ EY++ K
Sbjct: 842 NASSDKNSLEELVVIAIHTGRI----YSIVEAVSDSSAMSPFEVDASSGYATYAEYFNKK 897
Query: 352 YGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVP 411
YG+ + + QPL+ + + N L N + + R+ + ++ L P
Sbjct: 898 YGIVLAHPNQPLMKLKQSHHAHNLLVD--FNEEMVVKTEPKAGNVRKRKPNIHAH--LPP 953
Query: 412 ELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEI 454
EL P ++ + LPS+++RL +L+LA ++R + I
Sbjct: 954 ELLARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSI 996
>sp|Q10HL3|DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica
GN=DCL2A PE=2 SV=1
Length = 1410
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 207/454 (45%), Gaps = 68/454 (14%)
Query: 780 SPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMI 839
S + LET+GDSFLKY T L+ Y HEG L+ ++ +SN L +L +
Sbjct: 1004 SQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIH 1063
Query: 840 ATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCV 899
A +F PRD W+ P C+
Sbjct: 1064 AEEFNPRD-WIIP---------------------------------------------CL 1077
Query: 900 DLDCTVDMNVQSVVPYNLVTQH--SIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGL 957
D D + + + P + +Q SI K IAD VEALIGAYL G + A L M LG+
Sbjct: 1078 DYDERDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGM 1137
Query: 958 KVIPPVTNPESKHLSDVLLDGFD--KFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQ 1015
+ P + +S + + E + Y+F D LL+A+TH SY + T CYQ
Sbjct: 1138 NIEFHTEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQ 1197
Query: 1016 RLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLS 1075
RLEFLGDAILD+L T + Y +P LTDLRSA VNN +A AV+ G + H S
Sbjct: 1198 RLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSS 1257
Query: 1076 PGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSG 1135
LH + +++ + FT Y G I +PK LGD+ ES+AGAIYLDS
Sbjct: 1258 SELHRKMSYYLE-EFGQSFT-GPSYGWEAG-------IGLPKVLGDVIESIAGAIYLDSK 1308
Query: 1136 MSLDTVWKVYYEIMKSEIERLSV--SVPKSPIRELLEL-EPENARFSKPEKLADGRRVRV 1192
+ VW+ MK +E L+ ++ P++ L E + + + + + DG +
Sbjct: 1309 CDKEVVWRS----MKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVI 1364
Query: 1193 TVEVFGKGSYKGIGRNYC--IAKCTAAKCALKHL 1224
G+ +Y C +AK A+K LK L
Sbjct: 1365 ARVKAGETTYSATKSGPCKLVAKKLASKAVLKDL 1398
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 192/480 (40%), Gaps = 91/480 (18%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKR-SVTGH 59
+++++ +++ +C++LPSD + P I D TC++ LP +SP++ +V G
Sbjct: 566 LNSSVPLIHFFCSKLPSDEYFNPLPRFDI------DKASGTCTLHLPKSSPVQTVNVEGE 619
Query: 60 KMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIET---Y 116
K ++AC+ L+ + L + L+P +++ + EP + +IE +
Sbjct: 620 GSILK----ETVCLKACQELHAIGALTDSLLPE----LDVPCDEEPDIVVENKIEQPSYF 671
Query: 117 PDS--TKRRQFYHKRMASCFT----NCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIH 170
P+ R F + C+ C P +P + + L C + + K+
Sbjct: 672 PEEFVDNWRSFSRLGIYYCYKISLEGC-PKTASPT---DILLALKCDLGSDFTSSSFKLP 727
Query: 171 PPENSPQGLAILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFM--- 227
+++ A +T KY+ I L + V+++ + L F+
Sbjct: 728 GGQDN----ASVTMKYVG----------------IIHLNQEQVIIARRFQTTILSFLIGD 767
Query: 228 DYLFTKVLKLKKYLMLFDPNCSENSYFIVPTVSDSEQIVIDWKFMTLISE---------- 277
D+L +V KY Y ++P VS IDW M S
Sbjct: 768 DHL--EVSNGIKYFHEMQVPIGV-VYLLLPLVSGR----IDWCSMKFSSSPIYEANNKHM 820
Query: 278 HHNDVIQDIPEKERENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSR 337
H +DI + ++ F ++++V + N FYV ++ S P
Sbjct: 821 THCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNN-----IFYVISGFLDLDANSCLPQH 875
Query: 338 TNTYQTFEEYYSLKYGLQIQNLEQPLL-DVDHTSCRLNFLTPRYVNRKGINLATTSEETR 396
T T+++Y+ ++GL + QPLL H R NFL Y ++ E
Sbjct: 876 DGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVR-NFLHNCYSKKE-------KEPGD 927
Query: 397 REIRESLGKKQLLVPELC--LIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEI 454
R E L PELC ++ P A+ +PSI++R+ +LL+ +++ + +
Sbjct: 928 RYSVE-------LPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTV 980
Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 777 TGPSP--KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSN 822
+GP+ +RLE +GD+ L + T + Y YP+ L+ LRS V+N
Sbjct: 1190 SGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNN 1237
>sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica
GN=DCL4 PE=2 SV=1
Length = 1657
Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 215/460 (46%), Gaps = 62/460 (13%)
Query: 780 SPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMI 839
S +R E +GD+FLKY + + TY + EG+L+ RS V+N +L++L +K +
Sbjct: 1041 SLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIR 1100
Query: 840 ATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCV 899
+FEP +F P + L ++ P+ ++ C
Sbjct: 1101 DQQFEPTQ------FFAPGRPCKVVCNTDVEVRLHQ-------MDIHPDN-----RENC- 1141
Query: 900 DLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKV 959
+L CT + H + K IAD VE+LIGA+L+E G + A F+ W+G+ V
Sbjct: 1142 NLRCTR-------------SHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDV 1188
Query: 960 IPPVTNP------ESKHLSDVLLDGFD--KFEESINYRFKDKSYLLQAMTHASYFLNTLT 1011
NP +S ++ L+D D EE I Y+FK K LLQA H S+ ++
Sbjct: 1189 --DFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-G 1245
Query: 1012 DCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFF 1071
CYQRLEFLGDA+L+Y+IT +LY PG +TDLRS V N A AV H
Sbjct: 1246 GCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHL 1305
Query: 1072 KHLSPGLHEVIQRFVKMQAENDFTLNQEYY--LMEGECDEAEDIEVPKALGDLFESVAGA 1129
S L I +F E Y L E D E+ PKALGD+ ES GA
Sbjct: 1306 IKDSNHLTSAISKF-------------EMYVKLSNSEKDLLEEPACPKALGDIVESCIGA 1352
Query: 1130 IYLDSGMSLDTVWKVYYEIMKSEIERLSVSV-PKSPIRELLELEPENARFSKPEKLADGR 1188
+ LDSG +L+ VWKV ++K + ++ P +REL + KP K ADG
Sbjct: 1353 VLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMK-ADGE 1411
Query: 1189 -RVRVTVEVFGKGSY-KGIGRNYCIAKCTAAKCALKHLKS 1226
V+V V + K RN A+ AA+ L LK+
Sbjct: 1412 YHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLKN 1451
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
P H+G +RLE +GD+ L+Y IT +LY TYP++ G+++ LRS V N +L
Sbjct: 1237 HPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAA 1296
Query: 830 KQKVFGESMI 839
+K + +I
Sbjct: 1297 VEKSIHKHLI 1306
Score = 37.7 bits (86), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 295 VFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEYYSLKYGL 354
+F ++ +VV + N F F+V I+ ++ S ++ T+ E++ ++ +
Sbjct: 875 IFSKTDVVGSVVFSPHNNIF----FFVDGILDEINAWS-----EHSGATYAEHFKERFRI 925
Query: 355 QIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESLGKKQLLVPELC 414
++ + EQPLL N L R L T+E RE+ E + L PELC
Sbjct: 926 ELSHPEQPLLKAKQIFNLRNLLHNR--------LPETTESEGRELLEHFVE---LPPELC 974
Query: 415 LIH--PFPASLWRKSVSLPSILYRLNALLLADEIRTAVAS 452
+ F + LPS++YRL LL+A E++ + S
Sbjct: 975 SLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLS 1014
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 4 AIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMPT 63
++ +++ YC LP D+F +P+ + E C + LP N+ R G +
Sbjct: 585 SVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEG----IICRLILPPNAAF-RQADGQPCLS 639
Query: 64 KLLAWRIAAMEACRVLYELKELDNDLMP 91
K A R A ++AC L++L L + L+P
Sbjct: 640 KDEAKRDACLKACVKLHKLGALTDFLLP 667
>sp|A2RAF3|DCL1_ASPNC Dicer-like protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl1 PE=3 SV=2
Length = 1525
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 172/415 (41%), Gaps = 91/415 (21%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
Q ++ G + +RLE +GD FLK A +I L+ P+ E R + N NLF
Sbjct: 1068 QIHVQRGMGRNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAA 1127
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
K + + + F R W P G L L K+ S +
Sbjct: 1128 VDKEIYKYIRSRGFS-RHTWYPEG-----------------------LKLLQGKDHSRKA 1163
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGAL 949
E ++H++ +K+IAD EALIGA L+ GP
Sbjct: 1164 TTE--------------------------SKHALAEKTIADVCEALIGAALLSGGPDHRF 1197
Query: 950 LFMSWLGLKVIPPVTNPES---KHLSDVL------------LDGFD-----KFEESINYR 989
+ +K + + N S + D + DG + K EE ++YR
Sbjct: 1198 D----MAVKAVTTLVNSPSHKAERWKDYISFYTIPKYQRRAADGAELYLSRKIEEKLSYR 1253
Query: 990 FKDKSYLLQAMTHASY-FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDL 1048
F+ + L A TH SY CYQRLEFLGD+++D + L+ P LT+
Sbjct: 1254 FRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEH 1313
Query: 1049 RSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECD 1108
+ A+V+N +LAV+LG H K+ S L I ++ +E EGE +
Sbjct: 1314 KMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYA-----------EEIQTAEGESE 1362
Query: 1109 EAEDI-----EVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSV 1158
A D + PK L D+ E+ GA+++DS + + + + + + +K E +++
Sbjct: 1363 GAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFEVIERFFRDYIKPFFEDMAI 1417
>sp|Q09884|DCR1_SCHPO Protein Dicer OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=dcr1 PE=1 SV=1
Length = 1374
Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 166/401 (41%), Gaps = 98/401 (24%)
Query: 759 TSTPSDFSFDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSK 818
TS S +FD+ RLE GD FLK +I ++ +P+ E +L R K
Sbjct: 919 TSAESQLNFDYD------------RLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKK 966
Query: 819 QVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLS 878
+SN NL+K+ + ++T E R +W P G+
Sbjct: 967 IISNCNLYKVAIDCELPKYALSTPLEIR-HWCPYGF------------------------ 1001
Query: 879 LPNLKELSPEKVLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGA 938
QK C Y ++ + S+ K IAD VEA IGA
Sbjct: 1002 -----------------QKSTSDKCR----------YAVLQKLSV--KRIADMVEASIGA 1032
Query: 939 YLIECGPRGALLFMSWLGLKVIPPVT----------NPESKHLSDVLLDGFDKFEESINY 988
L++ G AL L + ++ N + L +V EE+I Y
Sbjct: 1033 CLLDSGLDSALKICKSLSVGLLDISNWDEWNNYFDLNTYADSLRNVQFPYSSYIEETIGY 1092
Query: 989 RFKDKSYLLQAMTHASYF-LNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTD 1047
FK+K L A H S + + YQ+LEFLGDA+LDY+I ++LY+ + G LTD
Sbjct: 1093 SFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNATSGELTD 1152
Query: 1048 LRSALVNNIIFASLAVRLGFHHFFKHLSPGL-------HEVIQRFVKMQAENDFTLNQEY 1100
+S V N + + L H + +H S + E+I+ F + +EN +
Sbjct: 1153 YKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFRETASEN------PW 1206
Query: 1101 YLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTV 1141
+ E I+ PK + D E++ AI+LDSG SL ++
Sbjct: 1207 FWFE--------IDSPKFISDTLEAMICAIFLDSGFSLQSL 1239
>sp|Q1DKI1|DCL1_COCIM Dicer-like protein 1 OS=Coccidioides immitis (strain RS) GN=DCL1 PE=3
SV=3
Length = 1500
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 148/343 (43%), Gaps = 44/343 (12%)
Query: 920 QHSIPDKSIADCVEALIGA----------YLIECGPRGALL------FMSWLGLKVIPPV 963
+H++ DK+IAD EALIGA + I AL+ ++W + +
Sbjct: 1148 KHALADKTIADVCEALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYSRLYSI 1207
Query: 964 TNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASY-FLNTLTDCYQRLEFLGD 1022
++ + LD + ++ + Y FK L A TH SY CYQRLEFLGD
Sbjct: 1208 PKYQTAVVDAAELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGD 1267
Query: 1023 AILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVI 1082
A+LD H+Y P LT+ + A+V+N S+AVRLG H H S L I
Sbjct: 1268 ALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQI 1327
Query: 1083 QRFVKMQAENDFTLNQEYYLMEGECDEAEDI-----EVPKALGDLFESVAGAIYLDSGMS 1137
+V +E E E + D + PK L D+ E+ GAI++DSG S
Sbjct: 1328 TNYV-----------EEIEAAELESGDPPDAWTLTSDPPKCLPDMVEAYIGAIFIDSGFS 1376
Query: 1138 LDTVWKVYYEIMKSEIERLSV------SVPKSPIRELLELEPENARF-----SKPEKLAD 1186
+ V + + + +K E +++ P + + L ++ + + P
Sbjct: 1377 FEVVEEFFQKFLKKHFEDMTIYDTYANKHPTTYLHNRLAIDFGCSNYCLKAGEVPYVDGP 1436
Query: 1187 GRRVRVTVEVFGKGSYKGIGRNYCIAKCTAAKCALKHLKSAKP 1229
G RV V V + +G+ + AK A++ AL L+ P
Sbjct: 1437 GTRVLAAVIVHDEVVAEGVASSSRYAKLKASEAALSKLEGLPP 1479
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 91/243 (37%), Gaps = 37/243 (15%)
Query: 40 FTCSIRLPINSPLKRSVTGHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINL 99
F C + LP SP+ R + G KL+A + AA E C +L + LD+ F++
Sbjct: 655 FVCEVVLPEKSPI-RGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDD-------HFVST 706
Query: 100 YENTEPVVPKTPEIETYPDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIP 159
Y +P S K Q+ K + R + T + +
Sbjct: 707 YHKR---LPAMRNARLAISSKKSNQYDMKVKPKLWETSRGIIPTSLNIVVLGF------- 756
Query: 160 DEQNKRGRKIHPPENSPQGLAILTTKYIPKVCSFPIFTRCG-EVEVSIELIDKNVVLSEE 218
R R++ E P L +LT + +P FP++ E +V I +S
Sbjct: 757 -----RPRRLLHREYHP--LVLLTREKLPHFPEFPLYLEDDIECDVICSSISSGFQVSSH 809
Query: 219 NLSNTLIFMDYLFTKVLKLKKYLMLFDPNCSENSYFIVP------TVSDSEQIVIDWKFM 272
+L F +F + + ++D + +Y++ P S + + ++DW +
Sbjct: 810 DLEVLTTFTLRIFQDI-----FHKVYDRDVGMMTYWLAPLNLSCDISSSASRDLLDWGIL 864
Query: 273 TLI 275
+
Sbjct: 865 QFV 867
>sp|Q2U6C4|DCL1_ASPOR Dicer-like protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl1 PE=3 SV=2
Length = 1523
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 169/412 (41%), Gaps = 85/412 (20%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
Q ++ G + +RLE +GD FLK A +I L+ P+ E R + N NLF
Sbjct: 1066 QIHVQRGMGKNYERLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTA 1125
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
+K + + F R W +P L + K++S E
Sbjct: 1126 LKKELYQYTRSRGFS-RHTW-------------------YPDGLTLLHGRDHRKKISAE- 1164
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGAL 949
++H++ +K++AD EALIGA L+ G L
Sbjct: 1165 -----------------------------SKHALREKTVADVCEALIGASLLS----GGL 1191
Query: 950 LFMSWLGLKVIPPVTN-PESKHL------SDVLL--------DGFD-----KFEESINYR 989
+ +K + V + P K L S +L DG++ K EE + YR
Sbjct: 1192 HNQFDMAVKAVTAVVDSPNHKALCWADYTSSYMLPKYQTQSPDGYELDLGRKVEEKLGYR 1251
Query: 990 FKDKSYLLQAMTHASYFLN-TLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDL 1048
FK L A TH SY CYQRLEFLGD++LD + L+ P LT+
Sbjct: 1252 FKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEH 1311
Query: 1049 RSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVK--MQAENDFTLNQEYYLMEGE 1106
+ A+V+N +LAV+LG H +H S L I + + AEN+ +Y+L+
Sbjct: 1312 KMAMVSNKFLGALAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENESQGAVDYWLVTK- 1370
Query: 1107 CDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSV 1158
+ PK L D+ E+ GA ++DS V + +KS +++
Sbjct: 1371 -------DPPKCLPDMVEAYLGAAFVDSDFQFRVVEDFFQRHVKSYFHDMTI 1415
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 173/467 (37%), Gaps = 95/467 (20%)
Query: 3 NAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMP 62
+A+ I+ RY + L + T + + +++S F C + LP SP+ R +TG
Sbjct: 639 SALAILARYASSLQYEKETSAQATYVV--LPQNNS--FVCEVILPEKSPV-RGLTGVPAS 693
Query: 63 TKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDSTKR 122
K A + AA + C +L + K LD+ V + N + T D +
Sbjct: 694 KKSAAKQSAAFDTCVLLRKHKLLDDHFNSVYHRRLPAMRNARLAI--TSSRTNQYDMLSK 751
Query: 123 RQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLAIL 182
+ K+ + P L+A + IP E +R + + +L
Sbjct: 752 PSLWGKQQGTL----------PEKLFATVISF---IPSEPLRRRHR---------SIILL 789
Query: 183 TTKYIPKVCSFPIFTRCG-EVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKYL 241
T + +P SF IF E V E +++ + +S + L F +F V +
Sbjct: 790 TRERLPDFPSFTIFLDDDIETIVVTESVEEALHISSQELEYLSTFTFRIFHDV-----FH 844
Query: 242 MLFDPNCSENSYFIVPT-------VSDSEQIVIDWKFMTLISEHHNDVIQDIPEKERE-- 292
+ + Y++ P VSDS+ + DW+ + L+ H N+ I E
Sbjct: 845 KTYAEEPEKLPYWVAPAETKKSKNVSDSKSLT-DWELLHLV--HENEEIPSTLHPSSEAL 901
Query: 293 --NFVFDESKFRDAVVMPW---YRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEY 347
FVFD PW YR YF +A I +HP PS + E
Sbjct: 902 INRFVFD----------PWDGRYR------YFTMA-IDNTLHPSDPPPSFLPRRKFMESI 944
Query: 348 YSLKYG---------LQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRRE 398
S L N +QP+L+V+ R N L K + ETR
Sbjct: 945 MSYTLSGSKNARAGFLSRCNWQQPVLEVELVRLRRNLLDKMTDTEKDV-------ETR-- 995
Query: 399 IRESLGKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLADE 445
+ E I P + ++ P+I+ RL+A L+A E
Sbjct: 996 --------CFVCIEPLRISAIPEEIAASCLAFPAIINRLDAYLIALE 1034
>sp|A1CBC9|DCL1_ASPCL Dicer-like protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl1 PE=3 SV=2
Length = 1534
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 170/420 (40%), Gaps = 100/420 (23%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
Q + G + +RLE +GD FLK A +I L+ P+ E R + N NLF
Sbjct: 1075 QIHFQRGMGKNYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNTA 1134
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
K++ + + F R W P G
Sbjct: 1135 KKRQIYRYIRSRSFS-RHVWYPDG------------------------------------ 1157
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGP---- 945
L +++ K D + M Q+ +H++ +K+IAD EALIGA L+ GP
Sbjct: 1158 -LTLLQGK----DHSKKMLSQA--------KHALGEKTIADVCEALIGACLLSGGPEHRF 1204
Query: 946 ----RGALLFMS-----------WLGLKVIP--PVTNPESKHLSDVLLDGFDKFEESINY 988
+ +F+ ++GL P V E + L + EE + Y
Sbjct: 1205 DMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAETNLAL-----QVEEKLGY 1259
Query: 989 RFKDKSYLLQAMTHAS-----YFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPG 1043
F+ L A+TH S YF CYQRLEFLGD++LD + L+ P
Sbjct: 1260 HFRYPRLLCSAVTHPSTPSTWYFR---VPCYQRLEFLGDSLLDMVCVEDLFHRFPDRDPQ 1316
Query: 1044 TLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLM 1103
LT+ + A+V+N +LAV+LGFH K S L I +V +E
Sbjct: 1317 WLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYV-----------EEIETA 1365
Query: 1104 EGECDEAEDIEV-----PKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSV 1158
E E + A D V PK L D+ E+ GAI++DS S + + + +K + +S+
Sbjct: 1366 EAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQDMSI 1425
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 182/483 (37%), Gaps = 88/483 (18%)
Query: 3 NAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMP 62
+AI I+ RY + L + T + + + C + LP SP+ R +TG
Sbjct: 647 SAIAILARYASSLQYEKETTPQATYVVQSVGN----TYVCEVILPEKSPI-RGLTGSPAI 701
Query: 63 TKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDSTKR 122
K +A + AA + C +L K LD+ F ++Y P + T S K
Sbjct: 702 RKSIAKQSAAFDTCLLLRRHKLLDD-------FFKSIYHKRLPAMRNAKLAIT---SKKT 751
Query: 123 RQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLAIL 182
Q+ S + R P LY + L +P E P Q + +L
Sbjct: 752 NQYDMLLKPSIWR--RHQGILPSKLYGTILSL---LPSE---------PLSREHQPILVL 797
Query: 183 TTKYIPKVCSFPIFTRCG-EVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKKYL 241
T + +P +FPI+ E +V +D + LS E L F +F V +
Sbjct: 798 TREKLPDFPAFPIYLDEDIETKVVPRSLDTGMELSAEELRALTTFTLRIFRDV-----FH 852
Query: 242 MLFDPNCSENSYFIVPT-------VSDSEQIVIDWKFMTLISEHHNDVI-QDI-PEKERE 292
+++ + Y++ P + +IDWK +T + E+ V +D+ PE
Sbjct: 853 KVYEQESEKLPYWLAPAEPLDANGREPGPRGIIDWKTVTFVQENDEIVFSRDLAPESLVN 912
Query: 293 NFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVH----PRSMFPSRTNTYQTFEEYY 348
F+FD+ R + F+ ++M + P S P R +
Sbjct: 913 RFMFDKWDGR--------------SRFFTIKVMEGLRAADPPPSSVPRRRHMDNIMSYCL 958
Query: 349 SLKYGLQIQNL-----EQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESL 403
SL + + L +QP+L + R N L T+EE + +
Sbjct: 959 SLSKNSRARFLAGCHWDQPVLQAELVRLRRNLLD-----------KLTTEEKK------I 1001
Query: 404 GKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLA----DEIRTAVASEIGLGKV 459
+ + E I P S+ ++ P+I+ RL++ L++ DE+ + S+ L V
Sbjct: 1002 QTECFICAEPLKISAIPPSIASTCLAFPAIITRLDSYLISIEACDELDLVIRSDYALEAV 1061
Query: 460 ILD 462
D
Sbjct: 1062 TKD 1064
>sp|A4RKC3|DCL1_MAGO7 Dicer-like protein 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=DCL1 PE=3 SV=2
Length = 1591
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 172/416 (41%), Gaps = 88/416 (21%)
Query: 772 DLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQ 831
+ ++ G + +RLE +GD FLK A +I LY T E + R + N NL +
Sbjct: 1073 NFQSGMGQNYERLEFLGDCFLKMATSIALY-TLVEGDEFEYHVERMLDICNKNLLNWALE 1131
Query: 832 KVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVL 891
E + + F R W PPG L
Sbjct: 1132 SNLQEHIRSKSFN-RRTWYPPG-------------------------------------L 1153
Query: 892 EIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLF 951
+++K K ++D +H++ DKSIAD EALIGA + + + F
Sbjct: 1154 KLLKGKKTEVD----------------DEHALGDKSIADVCEALIGAAYLTAQAQSSPNF 1197
Query: 952 MSWLGLKVIPPVTNPESKHL--------------------SDVLLDGFDKFEESINYRFK 991
L +K + +T+ ++ + S L+ + + + YRFK
Sbjct: 1198 D--LAVKAVTVMTHSKTHTMQAWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRFK 1255
Query: 992 DKSYLLQAMTHASY---FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDL 1048
+ L A H SY + N + YQRLEFLGD++LD + +L++ P LT+
Sbjct: 1256 NPRLLRCAFMHPSYPRQYENIPS--YQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEH 1313
Query: 1049 RSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQ-EYYLMEGEC 1107
+ A+V+N F +AV LGFH H+ P L I + ++ + Q + E
Sbjct: 1314 KMAMVSNQFFGCVAVGLGFHRHLIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREE 1373
Query: 1108 DEAED--IEV---PKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSV 1158
D A D IEV PK L D+ E+ GA+++D+G V + +K +S+
Sbjct: 1374 DYARDFWIEVHHPPKCLPDILEAYVGALFVDTGYDYSAVVGFFDRHIKPYFADMSI 1429
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 154/430 (35%), Gaps = 85/430 (19%)
Query: 40 FTCSIRLPINSPLKRSVTGHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINL 99
F + LP +SPL RS G +K LA AA C LY LD+ L + +
Sbjct: 671 FQGEVYLPASSPL-RSAMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHLKSTLAKVLPA 729
Query: 100 YENTEPVVPKTPEIETYPDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIP 159
N V S+K+R+ Y+ R + V LYA+ + L P
Sbjct: 730 MRNARLAV-----------SSKKRKSYNMRTKPVLWS---EVGPLTELYAMVLSLAQPGA 775
Query: 160 DEQNKRGRKIHPPENSPQGLAILTTKYIPKVCSFPIFTRCGEVEVS-IELI------DKN 212
+ R + +LT K +P++ FP+F G S + I
Sbjct: 776 AYYHSRP------------ILLLTRKPLPEIAQFPLFFGKGSSRRSNVRCIPLAHPWSPT 823
Query: 213 VVLSEENLSNTLIFMDYLFTKVLKLKKYLMLFDPNCSENSYFIVPTV-----SDSEQIVI 267
E + TL +F+K F + ++ YF+ P+ +D +V
Sbjct: 824 TTQVEGICAFTLCIFRDIFSKD---------FQASGTDMPYFLAPSTGIEHGTDLSSLVN 874
Query: 268 DWKFMTLISEHHNDVIQDIPEKERENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTN 327
+ + + H +P NF + F+D V + + F++ ++ +
Sbjct: 875 PERIIDWATVHRTTTTDRVPY----NFNEPDEFFQDKYVSDPFDGSRK---FFMRKVRRD 927
Query: 328 VHPRSMFPSRTNTYQTFE--EYYSLKYGLQI---------QNLEQPLLDVDHTSCRLNFL 376
+ P+ P + E+ L Y + + +QP+++ + R N L
Sbjct: 928 LKPQDKVPEGVPAPSKWRAVEHTILNYSVSLWKKSRAGHNSRQDQPVVEAELAPLRRNLL 987
Query: 377 TPRYVNRKGINLATTSEETRREIRESLGKKQL-LVPELCLIHPFPASLWRKSVSLPSILY 435
+ET E S G + LV E LI P + + P+I+Y
Sbjct: 988 ----------------DETDGE--NSTGPQTCYLVLETLLISQIPVDTVVMAYTFPAIIY 1029
Query: 436 RLNALLLADE 445
RL L++ E
Sbjct: 1030 RLENSLISLE 1039
>sp|Q69KJ0|RTL3_ORYSJ Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica
GN=Os06g0358800 PE=2 SV=1
Length = 299
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 121/247 (48%), Gaps = 21/247 (8%)
Query: 983 EESINYRFKDKSYLLQAMTHASYFLNTLTDC-YQRLEFLGDAILDYLITRHLYEDERAHS 1041
E + Y F+DK+ + +A+TH S++ Y+RLE+LGDA+L +++R ++
Sbjct: 43 ESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLTYGQLQ 102
Query: 1042 PGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYY 1101
PG LT LR+A V+ A +AV G HHF +H +P L I F++ + N
Sbjct: 103 PGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMYPIHSN---- 158
Query: 1102 LMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSVSVP 1161
G D PK L D+ ES+ GAIY DS + + VW+V+ ++ I ++
Sbjct: 159 ---GLLDP------PKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLG-- 207
Query: 1162 KSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKG---IGRNYCIAKCTAAK 1218
K P+ EL E + R K K D +TVEV G G + IA+ AAK
Sbjct: 208 KHPVSELFEFCQKTRRGVKIVK--DEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAK 265
Query: 1219 CALKHLK 1225
AL LK
Sbjct: 266 AALDKLK 272
>sp|Q4WVE3|DCL1_ASPFU Dicer-like protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=dcl1 PE=3 SV=3
Length = 1537
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 168/414 (40%), Gaps = 88/414 (21%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
Q + G + +RLE +GD FLK A +I L+ PN E R + N NLF
Sbjct: 1078 QIHFQRGMGKNYERLEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTA 1137
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
+K + + F R W P G L+L + K+ S +
Sbjct: 1138 IKKQIYRYIRSRGFS-RHIWYPDG-----------------------LTLLHGKDHSTKL 1173
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPR--- 946
+ E +H++ +K+IAD EALIGA L+ GP
Sbjct: 1174 LSE--------------------------GKHALGEKTIADVCEALIGASLLSGGPEHRF 1207
Query: 947 -------GALL---------FMSWLGLKVIPPVTNPESKHLSDVLLDGFDKFEESINYRF 990
AL+ + ++ L +P + + D D EE + Y F
Sbjct: 1208 DMATKAVSALVDSPSHRVSCWKEYITLYTLPKYQTEKHRGSED---DLARHVEEELGYHF 1264
Query: 991 KDKSYLLQAMTHASY--FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDL 1048
L A+TH S CYQRLEFLGD++LD + L+ P L++
Sbjct: 1265 TYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEH 1324
Query: 1049 RSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVK----MQAENDFTLNQEYYLME 1104
+ A+V+N +L+V+LGFH S L I +V+ QAE+ + +Y+++
Sbjct: 1325 KMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIETAQAESQGAV--DYWVV- 1381
Query: 1105 GECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSV 1158
A+D PK L D+ E+ GAI++DS + + +K E +S+
Sbjct: 1382 -----AKD--PPKCLPDMVEAYLGAIFVDSKFDFQVIEAFFERQIKPFFEDMSI 1428
Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 181/477 (37%), Gaps = 88/477 (18%)
Query: 3 NAIFIVNRYCARLP--SDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
+AI I+ RY + L + ++ ++TI+ S + C + LP SP+ R +TG
Sbjct: 650 SAIAILARYASSLQYEKETVPQVTYVVTIA------SNAYVCEVILPEKSPI-RGLTGSP 702
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
K +A R AA + C +L + + LD F ++Y P + T
Sbjct: 703 AMRKAVAKRSAAFDTCLLLRKNRLLDG-------YFNSIYHRRLPAMRNAKLAIT----C 751
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
KR Y + + + T + Y + M L P ++ R +
Sbjct: 752 KRTNAYDMLLKPSIWAKQRTTPTETF-YGIHMSLLPSKPLSRDHR------------PIL 798
Query: 181 ILTTKYIPKVCSFPIFT-RCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKK 239
+LT + +P+ +F I+ E +V + + +S + L + +F +F +
Sbjct: 799 LLTREKLPEFPAFSIYLDEDVETKVLSYPLKHGLQISVDKLQSLTVFTLRIFRDI----- 853
Query: 240 YLMLFDPNCSENSYFIVPT-------VSDSEQIVIDWKFMTLISEHHNDVIQDI----PE 288
+ +++ + Y++ P + + IDW ++ + H+ND I PE
Sbjct: 854 FHKVYEHEVQKMPYWLAPAEAIDGRGSGKNPRDCIDWDTVSFV--HNNDEITFTRNLNPE 911
Query: 289 KERENFVFD--ESKFR---DAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQT 343
F+FD + +FR AV + P M N+ ++ S+ N+
Sbjct: 912 SLVNRFIFDNWDGRFRYFTVAVADTLQPSDPPPPSVPRRRYMNNIMNYTLSLSK-NSRAR 970
Query: 344 FEEYYSLKYGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLATTSEETRREIRESL 403
F L + QP+L + R N L + T +E + E
Sbjct: 971 F---------LSSCDWNQPVLQAELVRLRRNLLD---------KMTTQEKEMQTEC---- 1008
Query: 404 GKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLA----DEIRTAVASEIGL 456
+ E I P S+ ++ P+I+ RL++ L+A DE+ + + L
Sbjct: 1009 ----FICAEPLRISALPPSIVSTCLAFPAIISRLDSYLIALEACDELELVIRPDFAL 1061
>sp|Q0UI93|DCL1_PHANO Dicer-like protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL1 PE=3 SV=2
Length = 1522
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 199/502 (39%), Gaps = 97/502 (19%)
Query: 772 DLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFK--LG 829
+ ++ GP+ +RLE +GD FLK A ++ ++ P +E + R + N NL + +G
Sbjct: 1041 NFKSGMGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVG 1100
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
K+K++ + T R NW P G
Sbjct: 1101 KKKLY--KYVRTDAFSRRNWYPEG------------------------------------ 1122
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGAL 949
L++++ K + +NV H++ DKS+AD EA IGA ++ G
Sbjct: 1123 -LKLLRGKGLKKTEEDWLNVT----------HNLGDKSVADVCEAFIGAAFMQHHKGGQW 1171
Query: 950 LFMSW-LGLKVIPPVTNPESKHL---------------------SDVLLDGFDKFEESIN 987
W +K + N + HL + LD K E
Sbjct: 1172 TPNDWDEAVKAVKLFANSDD-HLMEKWTDYYAAYTKPKYQTAGATATQLDLAHKIEMKHP 1230
Query: 988 YRFKDKSYLLQAMTHASY-FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLT 1046
YRF+ L A H S F+ YQRLEFLGD++LD HL+ P LT
Sbjct: 1231 YRFRYPRLLRSAFIHPSQPFMWENIPSYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLT 1290
Query: 1047 DLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGE 1106
+ ++ +V+N ++ V+LG+H K + L I+ +V E + N G
Sbjct: 1291 EHKTPMVSNKFLGAVCVKLGWHTHMKQNTAILSSQIRDYVYEVEEAEREAN-------GA 1343
Query: 1107 CDEAEDI-EVPKALGDLFESVAGAIYLDSGMSLDTVWK--------VYYEIMKSEIERLS 1157
D + E PK L D+ E+ AI++DS + V K + ++ E +
Sbjct: 1344 VDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDFNVVQKFFDLHLKPFFLDMTLDAYENFA 1403
Query: 1158 VSVPKSPIRELLELEPENARFS----KPEKL--ADGRRVRVTVEVFGKGSYKGIGRNYCI 1211
+ P + + LL + + + + E L G+ + V + K + +G++
Sbjct: 1404 SNHPTTRLSRLLSINFGCSEWRMGALETETLIPGKGKAIAAMVMIHDKVHFHSLGQSGRY 1463
Query: 1212 AKCTAAKCALKHLKSAKPADVK 1233
A+ A+ AL+ L+ P + +
Sbjct: 1464 ARVRASHAALEKLEGLPPYEFR 1485
>sp|A1DE13|DCL1_NEOFI Dicer-like protein 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=dcl1 PE=3 SV=1
Length = 1538
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 168/414 (40%), Gaps = 88/414 (21%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
Q + G + +RLE +GD FLK A +I LY P+ E R + N NLF
Sbjct: 1079 QIHFQRGMGKNYERLEFLGDCFLKMATSIALYTQNPDDDEFDYHVNRMCLICNKNLFNTA 1138
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
+K + + F R W P G L+L + K+ S +
Sbjct: 1139 IKKQIYRYIRSRGFS-RHIWYPDG-----------------------LTLLHGKDHSKKL 1174
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRG-- 947
+ E +H++ +K+IAD EALIGA L+ GP
Sbjct: 1175 LSE--------------------------GKHALGEKTIADVCEALIGASLLSGGPENRF 1208
Query: 948 --------ALL---------FMSWLGLKVIPPVTNPESKHLSDVLLDGFDKFEESINYRF 990
AL+ + ++ L +P + + D D EE + Y F
Sbjct: 1209 DMATKAVTALVDSPSHRVSCWKEYITLYTMPKYQTEKPRGSED---DLARHVEEELGYHF 1265
Query: 991 KDKSYLLQAMTHASY--FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDL 1048
L A+TH S CYQRLEFLGD++LD + L+ P LT+
Sbjct: 1266 TYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLTEH 1325
Query: 1049 RSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVK----MQAENDFTLNQEYYLME 1104
+ A+V+N +L+V+LGFH S L I +V+ QAE+ + +Y+++
Sbjct: 1326 KMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIESAQAESRGAV--DYWVV- 1382
Query: 1105 GECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLSV 1158
A+D PK L D+ E+ GAI++DS + + +K E +S+
Sbjct: 1383 -----AKD--PPKCLPDMVEAYLGAIFVDSKFDFQVIEVFFERQIKPFFEDMSI 1429
>sp|Q2VF19|DCL1_CRYPA Dicer-like protein 1 OS=Cryphonectria parasitica GN=DCL-1 PE=3 SV=1
Length = 1548
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 161/406 (39%), Gaps = 84/406 (20%)
Query: 768 DFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFK 827
+FQP + G + +RLE +GDSFLK A TI ++ PN E R + N NLF
Sbjct: 1074 NFQPGM----GANYERLELLGDSFLKMATTIAVFTLIPNKDEFDYHCERMVMICNQNLFG 1129
Query: 828 LGKQK--VFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKEL 885
+ K E + + FE R W P +++ F + L LK++
Sbjct: 1130 VAKSDDLKLHEYIRSKSFE-RGTWYP------------VLKLEFGKT-----HLKTLKQM 1171
Query: 886 SPEKVLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGP 945
+H + DKSIAD EALIGA +
Sbjct: 1172 D---------------------------------EHRLADKSIADVCEALIGAAYMTTRK 1198
Query: 946 RG----ALLFMSWLGLKVIPPVTNPESKHLSDVL------------LDGFDKFEESINYR 989
A+ ++ L P+T + H + V+ LD K E+ Y+
Sbjct: 1199 HDDYDLAVRAVTRLVNHKQHPMTKWDDYHAAYVMPGWQTMPANAAELDMAQKIHEATGYQ 1258
Query: 990 FKDKSYLLQAMTHAS--YFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTD 1047
FK L A H S Y + + YQRLEFLGDA+ D +L+ P LT+
Sbjct: 1259 FKHPRVLRSAFRHPSRPYVFDKVPH-YQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTE 1317
Query: 1048 LRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGEC 1107
+ A+V+N LAV LGFH F H + I +V + ++ G+
Sbjct: 1318 HKMAMVSNQFLGCLAVSLGFHKFILHHHASIGSQIHEYV-TEITEARRAAEDAAEAAGKP 1376
Query: 1108 DEA-------EDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYY 1146
A E + PK + D+ E+ GAI++DS V + ++
Sbjct: 1377 RSAYSRDYWVEAPQPPKCIPDVLEAYVGAIFVDSKYDYSVVQQFFH 1422
Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 87/226 (38%), Gaps = 36/226 (15%)
Query: 40 FTCSIRLPINSPLKRSVTGHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINL 99
F C + +P SP+ S G TK +A AA E C L + K LD+ L E ++
Sbjct: 660 FICEVMMPPLSPVT-SAIGKVYSTKQVAKCSAAFELCFQLIQKKFLDDHLRSKFVEKRHV 718
Query: 100 YENTEPVVPKTPEIETYPDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIP 159
N V S+K + Y R+ + P LYA + L+ P
Sbjct: 719 MANARLAV-----------SSKNKAKYDMRLKP---QIWAELGVPEKLYATVLILSKPSA 764
Query: 160 DEQNKRGRKIHPPENSPQGLAILTTKYIPKVCSFPIFTRCGEVEVSIELI----DKNVVL 215
E+ R L ILT +P++ F +F E E++ +L+ + +
Sbjct: 765 LERPSR------------PLFILTRTPLPQLKPFLLFLGPVEQEMTSDLVCQVLNCPITP 812
Query: 216 SEENLSNTLIFMDYLFTKVLKLKKYLMLFDPNCSENSYFIVPTVSD 261
+EE+L F +F + KKY N YF PT D
Sbjct: 813 TEEDLQLLTKFTLKIFVDIFN-KKYA----ANAQALPYFFAPTNKD 853
>sp|Q6ATG6|RTL2_ORYSJ Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica
GN=Os05g0271300 PE=2 SV=2
Length = 317
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 962 PVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLG 1021
PV P ++D + + E + Y+F+D L +A+TH S+ + ++ YQRLEF+G
Sbjct: 21 PVELPPPGFVAD-RAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAVS--YQRLEFVG 77
Query: 1022 DAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEV 1081
D+ L + LY PG L+ LR+A ++ A +AVR + + P L +
Sbjct: 78 DSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLL 137
Query: 1082 IQRF---VKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSL 1138
+ +F VK + E+D L+ Y ++ PK L D+ E++A A+Y+D L
Sbjct: 138 VGQFIETVKQEPEDD--LSTVPY-------GGSVVKAPKVLADIVEAIAAAVYVDCKFDL 188
Query: 1139 DTVWKVYYEIMKSEIERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFG 1198
+ +WKV + + I + ++ + P+ L EL ++ + ++ + G V VF
Sbjct: 189 EKLWKVTRWLFEPIIT--AETIDEQPVTMLHELCQKHGKMAQFKTWQKGG--MTVVNVFV 244
Query: 1199 KGSYKGIGRN--YCIAKCTAAKCALKHLKSAK 1228
G GIG + IAK AA+ A + L AK
Sbjct: 245 AGELVGIGSSEQKVIAKLNAARDATRKLAGAK 276
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
+RLE +GDS L A + FLY T P + G LS LR+ +S L ++
Sbjct: 71 QRLEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVA 118
>sp|Q9LTQ0|RTL2_ARATH Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1
SV=1
Length = 391
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 976 LDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTD--CYQRLEFLGDAILDYLITRHL 1033
++ + E+ +NY+F +KS L +A+TH S TD Y+RLEF+GD+ + I+ +L
Sbjct: 57 MESMEAVEKILNYKFSNKSLLKEAITHTS-----CTDFPSYERLEFIGDSAIGLAISNYL 111
Query: 1034 YEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAEND 1093
Y + P L+ LR+A V+ A +++ G + F + +P L E ++ F + + D
Sbjct: 112 YLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKED 171
Query: 1094 FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEI 1153
L+ Y + ++ PK L DLFES+AGA+Y+D L +W ++ +++ +
Sbjct: 172 -DLSVSYGGL---------VKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIV 221
Query: 1154 ERLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGIGRNYCIAK 1213
+ P+ L +L ++ + + DG + + + G N IA+
Sbjct: 222 TLDDLQKQPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIAR 281
Query: 1214 CTAAKCALKHLKSAKPADV 1232
AAK AL+ L P ++
Sbjct: 282 LIAAKEALRKLSEVFPVEM 300
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 779 PSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
PS +RLE IGDS + AI+ +LY TYP++ LS LR+ VS L ++
Sbjct: 90 PSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARVS 140
>sp|Q0CW42|DCL1_ASPTN Dicer-like protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl1 PE=3 SV=2
Length = 1519
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 164/421 (38%), Gaps = 102/421 (24%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
Q ++ G + +RLE +GD FLK A +I L+ +P+ +E R + N NLF
Sbjct: 1060 QVHMQRGMGKNYERLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSA 1119
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
+K + + + F RD W +P L + K++ E
Sbjct: 1120 VKKELYQFIRSRGFS-RDTW-------------------YPEGLTLLQGRDHSKKIGSE- 1158
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPR--- 946
++H++ +K+IAD EALIGA L+ GP+
Sbjct: 1159 -----------------------------SKHALAEKTIADVCEALIGAALLTPGPQHRF 1189
Query: 947 ----------------GALLFMSWLGLKVIPPVTN--PESKHLSDVLLDGFDKFEESINY 988
A + ++ L IP P+ + D + EE + Y
Sbjct: 1190 DMGVRAVSAVVDSNEHNAASWRDYISLYSIPKYQEQAPDGSEI-----DLCRRVEEKLGY 1244
Query: 989 RFKDKSYLLQAMTHASY-FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTD 1047
F+ L A TH SY CYQ LEFLGDA+LD + L+ P LT+
Sbjct: 1245 HFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDALLDMVCVEDLFRRFPDRDPQWLTE 1304
Query: 1048 LRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQ---------AENDFTLNQ 1098
+ A+V+N +LAV+LG H + S L I + + A + +TL Q
Sbjct: 1305 HKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHYAEEAQAAASQSDVAVDYWTLTQ 1364
Query: 1099 EYYLMEGECDEAEDIEVPKA-LGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIERLS 1157
+ PK L D+ E+ GA+++DS + V + + +K ++
Sbjct: 1365 ---------------DPPKVCLPDMVEAYLGAVFVDSNFRFEEVEVFFQQHIKPYFHDMA 1409
Query: 1158 V 1158
+
Sbjct: 1410 I 1410
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 162/397 (40%), Gaps = 76/397 (19%)
Query: 3 NAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKMP 62
+AI ++ RY + L + T + +T + +D+ + C + LP SP+ R TG
Sbjct: 633 SAITVLARYASSLQYENDT--SAQVTYVVLPVNDA--YVCEVILPEKSPI-RGATGMPAM 687
Query: 63 TKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVP--KTPEIETYPDST 120
K A R AA EACR+L + + LD L V + N + +T E + P S+
Sbjct: 688 KKSTAKRYAAFEACRLLRKHRLLDEYLNSVYHRRLPAMRNARLAITSHRTNEYKILPKSS 747
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
++K++ P LY + L + + P +
Sbjct: 748 ----LWNKQIGVI----------PGKLYGTVISL------------KPLTPLAREHGSMI 781
Query: 181 ILTTKYIPKVCSFPIFTRCGEVEVSIELIDKNVVLSEENLSNTLIFMDYLFTKVLKLKK- 239
+ T +P+ +FPIF GE +E I V ++ E L + +DY+ T L++ +
Sbjct: 782 LFTRDRLPQFPTFPIF--LGE---DVETIVLTVPVNME-LQPSADELDYMTTFTLRIFRD 835
Query: 240 -YLMLFDPNCSENSYFIVPTVS------DSEQIVIDWKFMTLISEHHNDVIQ---DI-PE 288
+ +D + Y+++P +S + V++W+ ++ S H D I+ D+ PE
Sbjct: 836 VFRKTYDKEPEKLPYWLLPAISFPCNQEADPRDVVNWEILS--SVHERDDIEYQADMPPE 893
Query: 289 KERENFVFDESKFRDAVVMPWYRNQFEPTYFYVAEIMTNVHPRSMFPSRTNTYQTFEEY- 347
+ FV+D R YR YF +A + N+ P S PS + +
Sbjct: 894 MLVDRFVYDHWDGR-------YR------YFTLA-VDENLQPSSPPPSHVARRRHMDTIM 939
Query: 348 -YSLKYG-------LQIQNLEQPLLDVDHTSCRLNFL 376
YS+ L N QP+L + R N L
Sbjct: 940 NYSISLSKNSRAKFLSRCNWNQPVLHAELVRLRRNLL 976
>sp|Q7S8J7|DCL1_NEUCR Dicer-like protein 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dcl-1
PE=2 SV=1
Length = 1584
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 153/389 (39%), Gaps = 80/389 (20%)
Query: 772 DLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQ 831
+ + G + +RLE +GDSFLK A TI +Y P+ E + R + N NLF
Sbjct: 1089 NFQTGMGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNKNLF----- 1143
Query: 832 KVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVL 891
+N L G LE + F N ++ PE ++
Sbjct: 1144 ---------------NNALEIG------LEEYIRSMSF-----------NRRQWYPEGLI 1171
Query: 892 EIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGAL-- 949
+ K K D +H + DKSIAD EALIGA + +G+
Sbjct: 1172 -LKKGKSKDAR----------------QRHVLADKSIADVCEALIGAAYLTGQEKGSFDM 1214
Query: 950 --------------LFMSWLGLKVIPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSY 995
+S+ + +++ + D KF E + Y+FK
Sbjct: 1215 AIKAVTAMVKDKKHRMISYGDYYAVYQKPTWQTESANSAQRDMAKKFSERMGYKFKHPRL 1274
Query: 996 LLQAMTHASY-FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVN 1054
L A H +Y L YQRLEFLGDA+ D + +L+ A P LT+ + A+V+
Sbjct: 1275 LRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVS 1334
Query: 1055 NIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDE----- 1109
N L+ LGF+ +SP + + I +V E T QE DE
Sbjct: 1335 NQFLCCLSFHLGFNKCIATMSPSILKDIAEYVTEIEEALETAKQEAINAGKTADEYSRDY 1394
Query: 1110 ----AEDIEVPKALGDLFESVAGAIYLDS 1134
+PK L D+ E+ GAI++DS
Sbjct: 1395 WVHITHASRLPKCLSDVVEAYIGAIFVDS 1423
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 183/474 (38%), Gaps = 103/474 (21%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHK 60
M + + + N + A LP T L+P I+ + F C + +P SP+K +V G
Sbjct: 652 MQSLVCLAN-FTATLPHPPETSLSPEYYITTVPGG----FQCEVVMPDASPIKSAV-GKV 705
Query: 61 MPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINLYENTEPVVPKTPEIETYPDST 120
+K +A AA E C L + LDN L V + + N V S+
Sbjct: 706 HLSKGVAKCAAAFELCLALLKAGHLDNHLQSVFTKQLPEMRNARLAV-----------SS 754
Query: 121 KRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPPENSPQGLA 180
K++ Y R+ + R V L+A L P + GR P L
Sbjct: 755 KKKTEYAMRLKPELWSVRGVVTQ---LFATAFVLENP-----DTLGRSSRP-------LL 799
Query: 181 ILTTKYIPKVCSFPIF--------TRCGEVEVSIELIDKNVVLSEENLSNTL-IFMDYLF 231
+L+ +P+V SFP+F RC + S++ D L E+ TL FMD +F
Sbjct: 800 LLSRSALPEVASFPLFFGTKRFSKVRCVPIPGSVQADD---TLVEQLTRFTLKAFMD-VF 855
Query: 232 TKVLKLKKYLMLFDPNCSENSYFIVPT---------VSDSEQIVIDWKFMTLISEHHNDV 282
+K ++ YF+ P ++ S +ID K + +SE+
Sbjct: 856 SKE---------YEATAVNLPYFLSPMDGGHGFDFRLAKSPAHLIDRKALAYVSEN---- 902
Query: 283 IQDIPEKERENFVFDESKFRDAVVMPWY-----------RNQFEPTYFYVAEIMTNVHPR 331
EK F+ + F+D V+ Y R+ +PT I+ H
Sbjct: 903 -----EKVPYTFLEPDDFFQDKFVVDPYDGARKFFTHHRRHDMKPTDPVPDGIVAPNHRA 957
Query: 332 SMFPSRTNTYQTFE-EYYSLKYGLQIQNLEQPLLDVDHTSCRLNFLTPRYVNRKGINLAT 390
T+ + +S G I +QP+++ S R +FL
Sbjct: 958 WRGLGTTHDILNYSNSLWSKSRGFMIFQADQPVVEAALISTRRDFL-------------- 1003
Query: 391 TSEETRREIRESLGKKQ-LLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLA 443
++T R+ E + +Q L+ E I P PA + + PSI++R+ + L+A
Sbjct: 1004 --DDTLRD--EDVEPQQCFLILEPMRISPIPADVVAMLLCFPSIIHRVESNLVA 1053
>sp|A2R345|DCL21_ASPNC Dicer-like protein 2-1 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl2-1 PE=3 SV=2
Length = 1387
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 160/389 (41%), Gaps = 90/389 (23%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+R E GDS LK+ ++ L+ +PN HEG LS R + V N L +
Sbjct: 950 QRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLAR-------------- 995
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
A ++AG A + N + P K +P +I +K
Sbjct: 996 ---------------------AALDAGLDAFIMNKMFTPR-KWSAP-----LISEKI--- 1025
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALL----FMSWLGL 957
S+ P Q ++ K +AD VEALIGA I+ G A F+ + L
Sbjct: 1026 ---------SLTP----KQRTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVNL 1072
Query: 958 KVIPPVTNPESK-HLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQR 1016
+ I T P K +++ L+ D I Y F +KS L++++TH S +T T YQR
Sbjct: 1073 ENIDRTTAPMPKDGVTNHTLND-DHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQR 1131
Query: 1017 LEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKH--- 1073
LEFLGDA+LD I L R G +T ++ A+VN + A + +
Sbjct: 1132 LEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRTNVQV 1191
Query: 1074 -------LSPGLHEV-IQRFVK-----MQAENDFTLNQEYYL----MEG-------ECDE 1109
L+P + + RF++ +Q D L++ L + G
Sbjct: 1192 TPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKHSPSYPWKS 1251
Query: 1110 AEDIEVPKALGDLFESVAGAIYLDSGMSL 1138
+ K D+ ES+ GAI++DS +L
Sbjct: 1252 LSQLNADKFFSDIIESILGAIFIDSHGNL 1280
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 990 FKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLR 1049
F +++ A+T S +LT+ YQR EF GD++L + ++ L+ G L++ R
Sbjct: 928 FSSIRHIITAITAPSA--QSLTN-YQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGR 984
Query: 1050 SALVNNIIFASLAVRLGFHHFF--KHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGEC 1107
+V N A A+ G F K +P +++ +L + M
Sbjct: 985 DEIVQNSRLARAALDAGLDAFIMNKMFTP------RKWSAPLISEKISLTPKQRTMS--- 1035
Query: 1108 DEAEDIEVPKALGDLFESVAGAIYLDSGMSL--DTVWKVYYEIMKSEIERLSVSVPKSPI 1165
K L D+ E++ GA Y+D G + + + E+ I+R + +PK +
Sbjct: 1036 --------TKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVNLENIDRTTAPMPKDGV 1087
Score = 35.0 bits (79), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 2 DNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLP-INSPLKRSVTGHK 60
D A+ +N +CA LP + P + ++DD+ + ++ LP P R + G +
Sbjct: 563 DTAVAHLNHFCAVLPRQPYASNEPEFSY---EKDDADLLRGTVTLPSCVHPGVRRIQGQR 619
Query: 61 M-PTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEF 96
T+ A + AA +A + LYE L + L+P +
Sbjct: 620 WWQTERAARKEAAFQAYKRLYEFGLLSDHLLPFKRNL 656
>sp|Q0UL22|DCL2_PHANO Dicer-like protein 2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL2 PE=3 SV=2
Length = 1399
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 157/393 (39%), Gaps = 110/393 (27%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GD LK+ T+ L P E L+ + + VSN L + MI
Sbjct: 947 QRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMITK 1006
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
F + P+Y L E G P +KE K+
Sbjct: 1007 SFT-------GAKWAPRYAGDLLAETG-----------PAVKEERSSKL----------- 1037
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIP 961
IAD +E+LIGA G A+L + L L + P
Sbjct: 1038 --------------------------IADIIESLIGACYTVGGFEKAVLCVQTL-LPLEP 1070
Query: 962 PVTNPESKHL------SDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQ 1015
++ P + + ++ L G D E I Y FK K LL+A+THAS+ + Y+
Sbjct: 1071 WISVPAANSILHEAAPAEADLMGLDVLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYE 1130
Query: 1016 RLEFLGDAILDYLITRHLYEDERAHSP----GTLTDLRSALVNNIIFASLAVRL------ 1065
RLEFLGDA+LDY+I++ L+ AHSP + +R+A VN + LA RL
Sbjct: 1131 RLEFLGDAVLDYIISKRLH----AHSPELSHQKMHAIRTATVNA---SFLAFRLFETTID 1183
Query: 1066 ----------------GFHHFFKHLSPGLH----EVIQRFVKMQAENDFTLNQE----YY 1101
F + SP L+ +++ +++ E LN+ ++
Sbjct: 1184 EETINKTSMRPESQKRAIWQFLRSGSPSLNANRDNALRQHEQVRDEIIIGLNEAARFPWH 1243
Query: 1102 LMEGECDEAEDIEVPKALGDLFESVAGAIYLDS 1134
L + PK L D+ ESV GA+Y+DS
Sbjct: 1244 LFAL-------TDPPKFLSDMVESVIGAVYIDS 1269
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 15/125 (12%)
Query: 1012 DCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFF 1071
D YQRLEFLGD IL ++ T HL LT + +V+N A + G F
Sbjct: 944 DNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFM 1003
Query: 1072 KHLSPGLHEVIQRFVK-MQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAI 1130
S + R+ + AE + +E K + D+ ES+ GA
Sbjct: 1004 ITKSFTGAKWAPRYAGDLLAETGPAVKEE--------------RSSKLIADIIESLIGAC 1049
Query: 1131 YLDSG 1135
Y G
Sbjct: 1050 YTVGG 1054
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 776 HTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQV-SNYNLFKLGKQKVF 834
H S +RLE +GD+ L Y I+ L+ P + K+ +R+ V +++ F+L + +
Sbjct: 1124 HVHCSYERLEFLGDAVLDYIISKRLHAHSPELSHQKMHAIRTATVNASFLAFRLFETTID 1183
Query: 835 GESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEII 894
E++ T P K + +G P+ L+ + +
Sbjct: 1184 EETINKTSMRPESQ---------KRAIWQFLRSGSPS-------------LNANRDNALR 1221
Query: 895 KQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIE 942
+ + V + + +N + P++L + P K ++D VE++IGA I+
Sbjct: 1222 QHEQVRDEIIIGLNEAARFPWHLFAL-TDPPKFLSDMVESVIGAVYID 1268
Score = 34.3 bits (77), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 399 IRESLGKKQLLVPELCLIHPFPASLWRKSVSLPSILYRLNALLLADEIRTAVASEIGLGK 458
I ++ K + + C++ P PA ++ LPSIL+R ++A+ +RT + LG
Sbjct: 866 INDAYTKTDEMAAKDCIVDPVPAPYSVFALLLPSILHRFGMAIIAETLRTTL-----LGP 920
Query: 459 VILD 462
V LD
Sbjct: 921 VALD 924
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 82/198 (41%), Gaps = 43/198 (21%)
Query: 1 MDNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLP--INSPLKRSVTG 58
+DNA ++ +C+ L + + P +EI+ + T + LP ++ ++ +
Sbjct: 559 LDNASQHLHHFCSILGAGPYIDNRPQFEFTEIRPG---VITARVILPLTVDPEVRTACAL 615
Query: 59 HKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEF------INLYENTEPVVPKTPE 112
T+ +A + AA EA + LY ++++L+P +E + + ++ +VP +P
Sbjct: 616 DTWATEKMAKQDAAFEAYKALYVAGLVNDNLLPARQEADDELSELQIPDHRPSLVPVSPT 675
Query: 113 IETYPDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIPDEQNKRGRKIHPP 172
++ +P + +Q P Y ++ L H
Sbjct: 676 LDPWPLFARHQQ-----------------QNPHVYYRTRLTL---------------HTV 703
Query: 173 ENSPQGLAILTTKYIPKV 190
++ P+ L +LT K +P +
Sbjct: 704 DDKPKHLILLTPKILPDI 721
>sp|Q0CEI2|DCL2_ASPTN Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl2 PE=3 SV=2
Length = 1377
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 183/471 (38%), Gaps = 118/471 (25%)
Query: 777 TGPSP---KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKV 833
T SP +R E GDS LK+ ++ LY +PN EG LS R + V N L +
Sbjct: 943 TAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVG 1002
Query: 834 FGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEI 893
++ +F PR W P L EK +E+
Sbjct: 1003 LDAFILTRRFTPR-KWTAP--------------------------------LISEKAVEV 1029
Query: 894 IKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMS 953
++ + K +AD VE+LIGA ++ G A +
Sbjct: 1030 AGKR------------------------PLSSKVLADVVESLIGAAYMDGGQAKAHTCIR 1065
Query: 954 WLGLKV-IPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTD 1012
L ++ I P+T P + +++ D ++ + Y F +++ L++A+TH S + T
Sbjct: 1066 RLLPEIEICPITPPPVHESAPHVMN--DSLKQHLGYTFVNEALLVEALTHPSCRSDASTQ 1123
Query: 1013 CYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRL------- 1065
YQRLEFLGDA+LD ++ + G +T ++ AL N + A +
Sbjct: 1124 SYQRLEFLGDAVLDMVVVHAMAHHAVECPQGEMTMIKHALTNANLLAFFCMEFVVAQEHT 1183
Query: 1066 ---------GFH-----------HFFKH----LSPGLHEVIQRFVKMQAENDFTLNQEYY 1101
GF F + L+ V+ R +++AE ++ ++
Sbjct: 1184 DVDAVPAAGGFALRSEQKPIELWRFMRSEALDLNNARETVLHRHSQLRAE---IVHALHH 1240
Query: 1102 LMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYE-------IMKSEIE 1154
+ + K D+ ES+ GAI++DS LD V ++ E + + +
Sbjct: 1241 GAQYPWQALSQLNADKFFSDIVESILGAIFVDSRGDLD-VCAMFVERIGLLPYLRRILAD 1299
Query: 1155 RLSVSVPKSPIRELLELEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGI 1205
R+ V P+ + R SK E L +RV V+ G SY+ +
Sbjct: 1300 RVDVMHPRHTAQ----------RLSKGEALFTAKRV---VDGSGNASYRCV 1337
>sp|Q4WA22|DCL2_ASPFU Dicer-like protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=dcl2 PE=3 SV=2
Length = 1388
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 172/428 (40%), Gaps = 114/428 (26%)
Query: 749 KSCEHGIIRNTSTPSDFSFDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVH 808
KS +H II STP L N+ +R E +GDS LK++++ L+ +PN H
Sbjct: 933 KSTDH-IITAISTP------LAHRLTNY-----QRYEFLGDSILKFSVSCQLFFQHPNWH 980
Query: 809 EGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAG 868
EG LS G MI PR L A ++ G
Sbjct: 981 EGYLSE--------------------GRDMIVQN--PR-------------LAKAALDTG 1005
Query: 869 FPASLWNCLSLPNLKELSPEK-VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKS 927
A + K L+ K +I +K VP + + K
Sbjct: 1006 LDAYIVT-------KRLASRKWSAPLISEKL------------GRVP----AKRQMSTKV 1042
Query: 928 IADCVEALIGAYLIECGPRGALL----FMSWLGLKVIPPVTN-----PES-KHLSDVLLD 977
+AD VEALIGA ++ G A F+ + L + T PES +H+ +
Sbjct: 1043 LADVVEALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTAARSVAPESARHMMN---- 1098
Query: 978 GFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDE 1037
D+ ++ I Y F+D+S L++A+TH S ++ T YQRLE+LGDA+LD +I ++
Sbjct: 1099 --DRLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHR 1156
Query: 1038 RAHSPGTLTDLRSALVNNIIFASLAVRLGFHH-----------FFKHLSPGLHEVIQRFV 1086
G +T ++ A+VN + A L + F S + RF+
Sbjct: 1157 IQRPQGDMTKIKHAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFM 1216
Query: 1087 K-----MQAENDFTLNQEYYLMEGECDE-----------AEDIEVPKALGDLFESVAGAI 1130
+ ++A D +L + L + + K D+ ESV GAI
Sbjct: 1217 RYRGQGLKAARDASLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAI 1276
Query: 1131 YLDSGMSL 1138
++DSG +L
Sbjct: 1277 FVDSGGNL 1284
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 990 FKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLR 1049
FK +++ A++ + + LT+ YQR EFLGD+IL + ++ L+ G L++ R
Sbjct: 932 FKSTDHIITAIS--TPLAHRLTN-YQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGR 988
Query: 1050 SALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDE 1109
+V N A A+ G + V +R + + G
Sbjct: 989 DMIVQNPRLAKAALDTGLDAYI---------VTKRLASRKWSAPLISEK-----LGRVPA 1034
Query: 1110 AEDIEVPKALGDLFESVAGAIYLDSGMS 1137
+ K L D+ E++ GA Y+D G S
Sbjct: 1035 KRQMST-KVLADVVEALIGAAYVDGGHS 1061
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 2 DNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKM 61
D A+ ++ +CA LP + + P+ + E ED + T + ++ ++R+
Sbjct: 562 DMAMAHLHHFCAVLPPQPYVDMRPVFSF-ETNEDGLLKGTVILPSCVHPKVRRTEGRRWW 620
Query: 62 PTKLLAWRIAAMEACRVLYELKELDNDLMPVTKE 95
T+ A + A +A + LYE +++ L+P+TK+
Sbjct: 621 RTERAAMKETAFQAYKSLYEFGLVNDHLLPLTKK 654
>sp|P0C5H7|DCL2_EMENI Dicer-like protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=dcl2 PE=3 SV=1
Length = 1429
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 115/291 (39%), Gaps = 64/291 (21%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+R E GDS LK+ + L+ PN HEG L+ V N L + + +I+
Sbjct: 909 QRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISN 968
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
+ F P+ LI AS
Sbjct: 969 R------------FTPRKWSAPLISEKLYAS----------------------------- 987
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGA----LLFMSWLGL 957
+ S+ K +AD VEALIGA I+ G A + F+ + L
Sbjct: 988 ----------------ASTRSMSAKVLADVVEALIGAAYIDGGLHKAQSCIVRFLPEIEL 1031
Query: 958 ---KVIPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCY 1014
K+ P + P SK L + E I Y FKDK+ L++A+TH S +T Y
Sbjct: 1032 PETKLPRPESMPMSKDHKKPHLIQQENLENHIGYTFKDKTLLMEALTHPSCPYDTSIQSY 1091
Query: 1015 QRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRL 1065
QRLEFLGDA+LD LI + G +T ++ A+VN + A L ++
Sbjct: 1092 QRLEFLGDAVLDMLIVDLIRAHHVECQQGEMTKIKHAIVNGHLLAFLCMQF 1142
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 18/150 (12%)
Query: 987 NYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLT 1046
+ +F+D +++ A+T TD YQR EF GD++L + + L+ + G LT
Sbjct: 884 DIQFQDLRHVITAITMP--LAQAPTD-YQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLT 940
Query: 1047 DLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGE 1106
+ ALV N A+ G + + RF + + Y
Sbjct: 941 ETLHALVQNARLTRAALDQGLDAYI---------ISNRFTPRKWSAPLISEKLYASASTR 991
Query: 1107 CDEAEDIEVPKALGDLFESVAGAIYLDSGM 1136
A K L D+ E++ GA Y+D G+
Sbjct: 992 SMSA------KVLADVVEALIGAAYIDGGL 1015
>sp|A1D9Z6|DCL2_NEOFI Dicer-like protein 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=dcl2 PE=3 SV=1
Length = 1388
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 175/427 (40%), Gaps = 112/427 (26%)
Query: 749 KSCEHGIIRNTSTPSDFSFDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVH 808
KS +H II STP F L N+ +R E +GDS LK++++ L+ +PN H
Sbjct: 933 KSTDH-IITAISTP------FAHALTNY-----QRYEFLGDSILKFSVSCQLFFQHPNWH 980
Query: 809 EGKLSHLRSKQVSNYNLFKLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAG 868
EG LS R+ V N L K ++ I TK W P + + LE
Sbjct: 981 EGYLSEGRAMIVQNPRLAKAALDTGL-DAYIVTKRIASRKWSAP--LISEKLE------- 1030
Query: 869 FPASLWNCLSLPNLKELSPEKVLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSI 928
+P +++S KVL
Sbjct: 1031 ---------RVPAKRQMS-TKVL------------------------------------- 1043
Query: 929 ADCVEALIGAYLIECGPRGALLFMSWL----GLKVIPPVT-----NPES-KHLSDVLLDG 978
AD VEALIGA ++ G A + L L + T PES +H+ +
Sbjct: 1044 ADVVEALIGAAYMDGGHATAQACIRRLLPEINLHAVDTRTATRSVAPESARHMMN----- 1098
Query: 979 FDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDER 1038
++ ++ I Y F+D+S L++A+TH S ++ T YQRLE+LGDA+LD +I ++
Sbjct: 1099 -ERLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHPI 1157
Query: 1039 AHSPGTLTDLRSALVNNIIFASLAV-------RLGFHHFFK---HLSPGLHEV-IQRFVK 1087
G +T ++ A+VN + A L + +L K ++ V + RF++
Sbjct: 1158 QRPQGDMTKIKHAVVNANLLAFLCMESATSEEKLDVAQTSKDSFAVTTSQESVELWRFMR 1217
Query: 1088 MQAEN-----DFTLNQEYYLMEGECDE-----------AEDIEVPKALGDLFESVAGAIY 1131
+ +N D +L + L + + K D+ ESV GAI+
Sbjct: 1218 YRGQNLNAARDASLARHRALRDEIASSLLHAPHYPWHALSRLNADKFFSDIVESVLGAIF 1277
Query: 1132 LDSGMSL 1138
+DSG L
Sbjct: 1278 VDSGGDL 1284
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 36/155 (23%)
Query: 990 FKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLR 1049
FK +++ A++ + F + LT+ YQR EFLGD+IL + ++ L+ G L++ R
Sbjct: 932 FKSTDHIITAIS--TPFAHALTN-YQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGR 988
Query: 1050 SALVNNIIFASLAVRLGFHHFF--------KHLSPGLHEVIQRF-VKMQAENDFTLNQEY 1100
+ +V N A A+ G + K +P + E ++R K Q
Sbjct: 989 AMIVQNPRLAKAALDTGLDAYIVTKRIASRKWSAPLISEKLERVPAKRQMST-------- 1040
Query: 1101 YLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSG 1135
K L D+ E++ GA Y+D G
Sbjct: 1041 ----------------KVLADVVEALIGAAYMDGG 1059
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 2 DNAIFIVNRYCARLPSDIFTRLAPIITISEIKEDDSIMFTCSIRLPINSPLKRSVTGHKM 61
D A+ ++ +CA LP + + P+ + E ED + T + ++ ++R+
Sbjct: 562 DMAMAHLHHFCAVLPPQPYADMRPVFSF-ETNEDGLLKGTVILPSCVHPKVRRTEGRRWW 620
Query: 62 PTKLLAWRIAAMEACRVLYELKELDNDLMPVTK 94
T+ A + A +A + LYE +++ L+P+TK
Sbjct: 621 RTERAAMKETAFQAYKALYEFGLVNDHLLPLTK 653
>sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl2-2 PE=3 SV=2
Length = 1362
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 152/400 (38%), Gaps = 107/400 (26%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+ L IGD+F+KY + L+ + HEG LS L+ + +S+ L Q G+ +I+
Sbjct: 926 RLLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISK 985
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
+ W+PP L+ PAS
Sbjct: 986 HLNGK-RWVPP-----------LVSGIEPAS----------------------------- 1004
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGA-----LLF---MS 953
N Q SI ++AD +A++GA + G A ++F S
Sbjct: 1005 --------------NEARQRSIGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKS 1050
Query: 954 WLGLKVIPPV---TNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTL 1010
W + T PE+ S ++D EE + Y F DKS +++MTH S
Sbjct: 1051 WNASSLHDGTYSKTRPENAVASTAIVD----MEELLGYTFTDKSLAVESMTHPSCTGLVQ 1106
Query: 1011 TDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHH- 1069
T Y+RL FLG ++L++++ +L+ + +P + L+SA NN +A+ FH
Sbjct: 1107 TTSYRRLSFLGASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAI--TFHQV 1164
Query: 1070 ---------------------------FFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYL 1102
F + S L + FV+ +E + E +
Sbjct: 1165 REQNHIDVDDEHNVHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWE 1224
Query: 1103 ME----GECDEAEDIEVPKALGDLFESVAGAIYLDSGMSL 1138
D+ V L D+ +S+ GA+++DS +L
Sbjct: 1225 QRFYPWVRLRALGDMRV---LSDIIQSIFGAVFIDSQATL 1261
>sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl2 PE=3 SV=1
Length = 1377
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 177/449 (39%), Gaps = 109/449 (24%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+R E +GDS LKY ++ L+ N EG L+ R+ V N
Sbjct: 947 QRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQN------------------- 987
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
PR L A ++AG + + K L+P + + + V
Sbjct: 988 ---PR-------------LTRAALDAGLDSFIIT-------KALTPRRWIAPLISTRV-- 1022
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALL----FMSWLG- 956
P + + K +AD +EALIGA ++ G A + F+ +
Sbjct: 1023 ---------GAAP----VKRQMSAKVLADVIEALIGAAYLDGGHSKAQICTHCFLPEVNR 1069
Query: 957 --LKVIPPVTNPESKHLSDVLLDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCY 1014
L + +T E + ++DG + + Y FK++ L++A+TH S + T Y
Sbjct: 1070 QPLDIPSLITQTEHGRTARHIIDG--DLQRHLGYTFKNEDLLIEALTHPSCQHDQTTQSY 1127
Query: 1015 QRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHH----- 1069
QRLEFLGDAILD +I +++ SPG +T ++ A+VN + +
Sbjct: 1128 QRLEFLGDAILDMVIVPIIFQYSNKISPGDMTLIKHAVVNANLLGFFCMEFSIEQDKTKV 1187
Query: 1070 ------FFKHLSPGLHEVIQRFVK-----MQAENDFTLNQE-----------YYLMEGEC 1107
F S H + RF++ +Q D L++ Y+
Sbjct: 1188 EKTPDGRFAVKSETQHVELWRFMRFNSLDLQTSRDAALDRHRRLRNKILTSLYHGPSYPW 1247
Query: 1108 DEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEI-MKSEIER-----LSVSVP 1161
+ K D+ ESV GAIY+DSG L + +I + S + R ++V+ P
Sbjct: 1248 QSLSQLYADKFFSDIVESVLGAIYVDSGGDLSACERFLEQIGLLSYVRRVLLDGINVTHP 1307
Query: 1162 KSPIRELLELEPENARFSKPEKLADGRRV 1190
++ + R SK + L + RRV
Sbjct: 1308 RNIAQ----------RLSKGDALFNLRRV 1326
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 19/126 (15%)
Query: 1014 YQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFF-- 1071
YQR EFLGD+IL Y+++ L+ G LT+ R+ +V N A+ G F
Sbjct: 946 YQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLDSFIIT 1005
Query: 1072 KHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIY 1131
K L+P +R++ M K L D+ E++ GA Y
Sbjct: 1006 KALTP------RRWIAPLISTRVGAAPVKRQMSA-----------KVLADVIEALIGAAY 1048
Query: 1132 LDSGMS 1137
LD G S
Sbjct: 1049 LDGGHS 1054
>sp|Q2H0G2|DCL1_CHAGB Dicer-like protein 1 OS=Chaetomium globosum (strain ATCC 6205 / CBS
148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DCL1 PE=3
SV=2
Length = 1607
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 152/402 (37%), Gaps = 91/402 (22%)
Query: 770 QPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLG 829
Q ++ G + +RLE +GD FLK A TI ++ P+ E + R + N NLF
Sbjct: 1099 QISFQSGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNA 1158
Query: 830 KQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEK 889
+ E + + F+ R +W Y E ++ G
Sbjct: 1159 LEVKLEEHIRSMAFD-RRSW---------YPEGLTLKKG--------------------- 1187
Query: 890 VLEIIKQKCVDLDCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGAL 949
K+K +L QH + DK+IAD EALIGA + +
Sbjct: 1188 -----KRK------------------DLTRQHVLADKTIADVCEALIGAAYLTAQEQTPP 1224
Query: 950 LF-MSWLGLKVIPPVTNPESKHLSD-----------------VLLDGFDKFEESINYRFK 991
F ++ + V+ N SD LD +FE + Y F
Sbjct: 1225 NFDLAIRAVTVMVKDKNHTMTSYSDYYAAYSPPAWQTAPCNSTQLDMAARFEARMGYAFT 1284
Query: 992 DKSYLLQAMTHASY-FLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRS 1050
L A H +Y + YQRLEFLGDA+LD L+ P LT+ +
Sbjct: 1285 HPRLLRSAFQHPTYPSVYEKLPSYQRLEFLGDALLDMASVEFLFHRFPGADPQWLTEHKM 1344
Query: 1051 ALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFV-----KMQAEND---FTLNQEYYL 1102
A+V+N LAV LGFH + + + + I +V +Q+ D T +
Sbjct: 1345 AMVSNQFLGCLAVYLGFHRAISYCASAIQKEITEYVTEIEDALQSARDDASKTPCNRHAT 1404
Query: 1103 MEGECDE-----AEDIEV-----PKALGDLFESVAGAIYLDS 1134
D A D V PK L D+ E+ GA+++DS
Sbjct: 1405 TPSPGDLPAESFARDFWVRCSRPPKCLPDVVEAYVGAVFVDS 1446
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 169/436 (38%), Gaps = 95/436 (21%)
Query: 40 FTCSIRLPINSPLKRSVTGHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKEFINL 99
+ C + LP +SP+ RS TG +K +A AA E C +L + K LD L P + +
Sbjct: 697 YQCEVTLPESSPI-RSATGKVYASKAVAKCSAAYEMCLMLIKGKYLDQHLRPTFTKQLPA 755
Query: 100 YENTEPVVPKTPEIETYPDSTKRRQFYHKRMASCFTNCRPSVNTPCYLYAVKMKLTCPIP 159
N V S+K+++ Y R+ + + P L+A+ + L P
Sbjct: 756 MRNARLAV-----------SSKKKEQYKMRIKPELWSV---LGEPTELFAMALTLADPTA 801
Query: 160 DEQNKRGRKIHPPENSPQGLAILTTKYIPKVCSFPIF--------TRCGEVEVSIELIDK 211
++ +SP L +LT + IP++ SFP++ C V +EL D
Sbjct: 802 LARH----------SSP--LLLLTRQPIPQIASFPLYFGKNRSSAVHCVPVPGRVELDDN 849
Query: 212 NVVLSEENLSNTLIFMDYLFTKVLKLKKYLMLFDPNCSENSYFIVPT----------VSD 261
+ + ++ TL +F+K ++ ++ YF+ PT V+D
Sbjct: 850 QI---QGLVAVTLAIFKDIFSKE---------YEATAAQLPYFLAPTLMQHGSDFTSVTD 897
Query: 262 SEQIVIDWKFMTLISEHHNDVIQDIPEKERENF-----VFDESKFRDAVVMPWYRNQFEP 316
+IV DW +T + + N+ + + E + F V D + R+ +P
Sbjct: 898 LSRIV-DWGAVTFVRD--NERVAYALDDEADEFFKNKYVADPYDGSRKFFLRGRRHDMKP 954
Query: 317 TYFYVAEIMTNVHPRSMFPSRTNTYQTFE-EYYSLKYGLQIQNLEQPLLDVDHTSCRLNF 375
T I+T H +T+ + +S +QP+++ + R N
Sbjct: 955 TDMVPEGIVTPGHRAWRVSCKTHDILNYSLSAWSKSRAFLTPREDQPVVEAEVLPIRRNL 1014
Query: 376 LTPRYVNRKGINLATTSEETRREIRESLGKKQL------LVPELCLIHPFPASLWRKSVS 429
L + +G L +V E I P P L + +
Sbjct: 1015 LD-----------------------DHIGDDDLEPKPCFIVLEPLRISPLPVDLVAMAYN 1051
Query: 430 LPSILYRLNALLLADE 445
P+I++R+++ L+A E
Sbjct: 1052 FPAIMHRIDSNLVALE 1067
>sp|Q2VF18|DCL2_CRYPA Dicer-like protein 2 OS=Cryphonectria parasitica GN=DCL-2 PE=3 SV=1
Length = 1451
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 161/416 (38%), Gaps = 119/416 (28%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+R+E +GDS LK IT+ L T ++ EG LS ++ + VSN L + + ++
Sbjct: 1003 ERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDAELDQFLVTQ 1062
Query: 842 KFEPRDNWLPPGYFVPKYLETALIEAGFPASLWNCLSLPNLKELSPEKVLEIIKQKCVDL 901
+ + W PP Y+ + P S + LSP+ + +++
Sbjct: 1063 QLVTK-GWQPP------YMSDLAKQDQEPES---------KRILSPKTLADVV------- 1099
Query: 902 DCTVDMNVQSVVPYNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMSWLGLKVIP 961
EALIG ++ G AL +++
Sbjct: 1100 -------------------------------EALIGVSFVDGGLPKALEC-----IRLFI 1123
Query: 962 PVTNPES-KHLSDVLLDG-----------FDKFEESINYRFKDKSYLLQAMTHASYFLNT 1009
P + P + D+L E+ I Y F +K+ L++A+TH SY ++
Sbjct: 1124 PESQPRPFSEVRDILFGAAEPKGMKLPADLQLLEQLIEYSFCEKALLVEAVTHPSYNVSG 1183
Query: 1010 LTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLRSALVNNIIFASLAV-----R 1064
CY RLEF+GDAILDY+I ++ E A + LR+ALVN I L + +
Sbjct: 1184 TVACYDRLEFIGDAILDYIIVEEVFALEPALENWQMHLLRTALVNADILGFLIMEWSYKQ 1243
Query: 1065 LGFH----------------HFFKHLSPGLHEV-----IQRFVKMQAENDFTLNQEYYLM 1103
+GF SP L + + F++ Q+ + T+ +E +
Sbjct: 1244 MGFEVCRANEGDSDSKSSGDSTSDKASPRLEQTEVPIPLWSFMR-QSSAELTMERE--IT 1300
Query: 1104 EGECDEAED-------------------IEVPKALGDLFESVAGAIYLDSGMSLDT 1140
+ +E D + K D FE++ GAI++D+G D
Sbjct: 1301 KARFEELRDPILEAMRSGTHYPWALFARLHAQKFYSDFFEALVGAIWVDAGPGFDA 1356
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 15/148 (10%)
Query: 989 RFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDL 1048
R + S L++A+ S + Y+R+EFLGD+IL IT +L + G L+ +
Sbjct: 980 RISNVSMLVEAICAKS---ARTPENYERIEFLGDSILKTCITVNLAATKLHLPEGILSLM 1036
Query: 1049 RSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECD 1108
+ LV+N A F V Q+ V + + + + +
Sbjct: 1037 KDRLVSNARLCRAACDAELDQFL---------VTQQLVTKGWQPPYMSD---LAKQDQEP 1084
Query: 1109 EAEDIEVPKALGDLFESVAGAIYLDSGM 1136
E++ I PK L D+ E++ G ++D G+
Sbjct: 1085 ESKRILSPKTLADVVEALIGVSFVDGGL 1112
>sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl2 PE=3 SV=1
Length = 1389
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 920 QHSIPDKSIADCVEALIGAYLIECGPRGALL----FMSWLGLKVIPPVTNPESKHLSDVL 975
+ + K +AD VEALIGA ++ G A F+ + L + T S
Sbjct: 1036 KRQVSSKVLADVVEALIGAAYMDGGHAAAQACIRRFLPEINLHSLDTRTLSRSVAPEGAR 1095
Query: 976 LDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYE 1035
D+ + I+Y F+++S L++A+TH S + T YQRLEFLGDA+LD +I ++
Sbjct: 1096 QTIHDRLKRHISYTFENESLLVEALTHPSCDYDASTQSYQRLEFLGDAVLDMIIVSAIFN 1155
Query: 1036 DERAHSPGTLTDLRSALVNNIIFASLAVRLGF---HHFFKHLSPGLHEVIQ--------R 1084
G +T ++ ALVN + A L + + +S EVI R
Sbjct: 1156 HPVQMPQGHMTKIKHALVNANLLAFLCMEFAIPEERASVEQISTLQFEVISNEELVELWR 1215
Query: 1085 FVKMQA-----ENDFTLNQEYYLMEGECDEAED-----------IEVPKALGDLFESVAG 1128
F++ + D +L + L + + + K D+ ES+ G
Sbjct: 1216 FMRYRGLDLNNARDASLARHRALRDEILHSLQHDPHYPWQALSRLSADKFFSDIMESILG 1275
Query: 1129 AIYLDSGMSL 1138
AI++DSG L
Sbjct: 1276 AIFVDSGGDL 1285
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+R E +GDS LK++++ L+ +PN HEG LS R + V N L K +I
Sbjct: 955 QRYEFLGDSILKFSVSCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITK 1014
Query: 842 KFEPRDNWLPP 852
F PR W P
Sbjct: 1015 MFTPR-KWSAP 1024
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 18/146 (12%)
Query: 990 FKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYEDERAHSPGTLTDLR 1049
F +++ A++ S LT+ YQR EFLGD+IL + ++ L+ G L++ R
Sbjct: 933 FTSTQHIITAISAPSA--QALTN-YQRYEFLGDSILKFSVSCQLFFKHPNWHEGYLSEGR 989
Query: 1050 SALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFTLNQEYYLMEGECDE 1109
+V N A+ G F VI + + + +++ + G+
Sbjct: 990 DEIVQNPRLTKAALDTGLDAF----------VITKMFTPRKWSAPLISERLERVAGKRQV 1039
Query: 1110 AEDIEVPKALGDLFESVAGAIYLDSG 1135
+ K L D+ E++ GA Y+D G
Sbjct: 1040 SS-----KVLADVVEALIGAAYMDGG 1060
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 2 DNAIFIVNRYCARLPSDIFTRLAPIIT----ISEIKEDDSIMFTCSIRLPINSPLKRSVT 57
D A+ ++ +CA LPS + + P+ + I+ ++ I+ C ++ ++RS
Sbjct: 562 DTAMAHLHHFCAVLPSQPYVDMRPVFSVETDIANLRRGIVILPNC-----VHPKVRRSEG 616
Query: 58 GHKMPTKLLAWRIAAMEACRVLYELKELDNDLMPVTKE 95
T+ A + AA +A + LYE ++++L+P+T +
Sbjct: 617 QRWWRTERAAMKEAAFQAYKSLYEFGLVNDNLLPLTNK 654
>sp|A0RRM7|RNC_CAMFF Ribonuclease 3 OS=Campylobacter fetus subsp. fetus (strain 82-40)
GN=rnc PE=3 SV=1
Length = 223
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 40/205 (19%)
Query: 976 LDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYE 1035
+D ++ EE + Y+FK+K+ L +A+TH S +++ + +RLEFLGDA+LD ++ +L+
Sbjct: 1 MDKLNRLEEHLGYKFKNKTLLKEALTHKS-MKSSVNN--ERLEFLGDAVLDLIVGEYLFF 57
Query: 1036 DERAHSPGTLTDLRSALVNNIIFASLA--VRLGFHHFFKHLSPGLHEVIQRFVKMQAEND 1093
+ G L+ LR+ALVN FAS++ +RLG D
Sbjct: 58 KFKDTDEGNLSKLRAALVNEKSFASISSQIRLG--------------------------D 91
Query: 1094 FTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEI 1153
F YL E D P + D E++ GAIYL+SG L+ V K++ +++S+
Sbjct: 92 F-----LYLSAAE-DNNNGRNKPSLVSDALEALMGAIYLESG--LEAVKKIFINLLESQY 143
Query: 1154 ERLSVSVPKSPIRELLELEPENARF 1178
+ + + L+ E ARF
Sbjct: 144 NNIDLQSLGKDYKTTLQ-EITQARF 167
Score = 34.7 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GD+ L + +L+ + + EG LS LR+ V+ + + Q G+ + +
Sbjct: 37 ERLEFLGDAVLDLIVGEYLFFKFKDTDEGNLSKLRAALVNEKSFASISSQIRLGDFLYLS 96
Query: 842 KFEPRDNWLPPGYFVPKYLETAL----IEAGFPA 871
E +N V LE + +E+G A
Sbjct: 97 AAEDNNNGRNKPSLVSDALEALMGAIYLESGLEA 130
>sp|A7H5Y2|RNC_CAMJD Ribonuclease 3 OS=Campylobacter jejuni subsp. doylei (strain ATCC
BAA-1458 / RM4099 / 269.97) GN=rnc PE=3 SV=1
Length = 225
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 48/261 (18%)
Query: 976 LDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQRLEFLGDAILDYLITRHLYE 1035
+ +K E+S+ Y FKDK+ L+ A+TH S F + + +RLEFLGDA+LD ++ +L+
Sbjct: 1 MKNIEKLEQSLTYEFKDKNLLIHALTHKS-FKKSYNN--ERLEFLGDAVLDLVVGEYLFH 57
Query: 1036 DERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAENDFT 1095
+ G L+ LR+ALVN FA +A L F F+ + EN+
Sbjct: 58 KFTKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFI-------------FMSVAEENN-- 102
Query: 1096 LNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMKSEIER 1155
E P L D E++ GAI+L++G + +M+ +
Sbjct: 103 ---------------GGKEKPSILSDALEAIIGAIHLEAGFEFAKT--IALRLMEKNFPQ 145
Query: 1156 LSVSVP----KSPIRELLE------LEPENARFSKPEKLADGRRVRVTVEVFGKGSYKGI 1205
+ + K+ ++E+ + + E R P+ L ++ + + + GK + I
Sbjct: 146 IDAKILIKDYKTKLQEITQGKIGQTPQYETVRAFGPDHL---KQFEIALMLDGKELARAI 202
Query: 1206 GRNYCIAKCTAAKCALKHLKS 1226
+ A+ AAK AL+ L S
Sbjct: 203 AGSKKEAQQMAAKIALEKLGS 223
>sp|P51833|RNC_BACSU Ribonuclease 3 OS=Bacillus subtilis (strain 168) GN=rnc PE=1 SV=2
Length = 249
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 37/257 (14%)
Query: 976 LDGFDKFEESINYRFKDKSYLLQAMTHASYFLNTLTDCYQ---RLEFLGDAILDYLITRH 1032
++ F +F+E I+ F+++ L QA TH+SY Y+ RLEFLGDA+L+ I+R
Sbjct: 17 VEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISRF 76
Query: 1033 LYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQAEN 1092
L+ A S G LT LR+A+V SLA L F
Sbjct: 77 LFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSF------------------------G 112
Query: 1093 DFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMS-LDTVWKVYYEIMKS 1151
D L L +GE + + P L D+FE+ GA+YLD G+ +++ KVY +
Sbjct: 113 DLVL-----LGKGE-EMTGGRKRPALLADVFEAFIGALYLDQGLEPVESFLKVYVFPKIN 166
Query: 1152 EIERLSVSVPKSPIRELLELEPENA---RFSKPEKLADGRRVRVTVEVFGKGSYKGIGRN 1208
+ V KS ++E ++ + + + + S + A R V + G+ G GR+
Sbjct: 167 DGAFSHVMDFKSQLQEYVQRDGKGSLEYKISNEKGPAHNREFEAIVSLKGEPLGVGNGRS 226
Query: 1209 YCIAKCTAAKCALKHLK 1225
A+ AA+ AL L+
Sbjct: 227 KKEAEQHAAQEALAKLQ 243
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 782 KRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLFKLGKQKVFGESMIAT 841
+RLE +GD+ L+ I+ FL+ YP + EG L+ LR+ V +L L + FG+ ++
Sbjct: 59 ERLEFLGDAVLELTISRFLFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLVLLG 118
Query: 842 KFE 844
K E
Sbjct: 119 KGE 121
>sp|B9LB70|RNC_CHLSY Ribonuclease 3 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM
637 / Y-400-fl) GN=rnc PE=3 SV=1
Length = 244
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 92/210 (43%), Gaps = 42/210 (20%)
Query: 977 DGFDKFEESINYRFKDKSYLLQAMTHASYF------LNTLTDCYQRLEFLGDAILDYLIT 1030
D + E +I F+D++ L A H S F LN LTD +RLEFLGD++L ++ T
Sbjct: 3 DRLAELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTD-NERLEFLGDSVLHFVTT 61
Query: 1031 RHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQA 1090
L+E TLT+ R+ALV+ A A +
Sbjct: 62 TWLFETFPDQDEATLTNWRAALVSTKGLAECAAQ-------------------------- 95
Query: 1091 ENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMK 1150
F L Q YL GE D K L DLFE++ GAIYLD G L+T +
Sbjct: 96 ---FNLGQYAYLSRGE-DNPGGRSRQKLLADLFEALVGAIYLDQG--LETARAFIVPFWQ 149
Query: 1151 SEIERLSVSVPKSPIRELLELEPENARFSK 1180
+ IE++ + + P L EL ARF +
Sbjct: 150 ARIEQI-IHIDLDPTTRLQEL--MQARFKQ 176
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 767 FDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLF 826
F+ QP L NH + +RLE +GDS L + T +L+ T+P+ E L++ R+ VS L
Sbjct: 32 FNEQPHLLNHLTDN-ERLEFLGDSVLHFVTTTWLFETFPDQDEATLTNWRAALVSTKGLA 90
Query: 827 KLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEA 867
+ Q G+ ++ E DN PG + L L EA
Sbjct: 91 ECAAQFNLGQYAYLSRGE--DN---PGGRSRQKLLADLFEA 126
>sp|A9WJ69|RNC_CHLAA Ribonuclease 3 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=rnc PE=3 SV=1
Length = 244
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 92/210 (43%), Gaps = 42/210 (20%)
Query: 977 DGFDKFEESINYRFKDKSYLLQAMTHASYF------LNTLTDCYQRLEFLGDAILDYLIT 1030
D + E +I F+D++ L A H S F LN LTD +RLEFLGD++L ++ T
Sbjct: 3 DRLAELERAIGITFRDRTLLQTAFMHRSLFNEQPHLLNHLTD-NERLEFLGDSVLHFVTT 61
Query: 1031 RHLYEDERAHSPGTLTDLRSALVNNIIFASLAVRLGFHHFFKHLSPGLHEVIQRFVKMQA 1090
L+E TLT+ R+ALV+ A A +
Sbjct: 62 TWLFETFPDQDEATLTNWRAALVSTKGLAECAAQ-------------------------- 95
Query: 1091 ENDFTLNQEYYLMEGECDEAEDIEVPKALGDLFESVAGAIYLDSGMSLDTVWKVYYEIMK 1150
F L Q YL GE D K L DLFE++ GAIYLD G L+T +
Sbjct: 96 ---FNLGQYAYLSRGE-DNPGGRSRQKLLADLFEALVGAIYLDQG--LETARAFIVPFWQ 149
Query: 1151 SEIERLSVSVPKSPIRELLELEPENARFSK 1180
+ IE++ + + P L EL ARF +
Sbjct: 150 ARIEQI-IHIDLDPTTRLQEL--MQARFKQ 176
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 767 FDFQPDLENHTGPSPKRLETIGDSFLKYAITIFLYCTYPNVHEGKLSHLRSKQVSNYNLF 826
F+ QP L NH + +RLE +GDS L + T +L+ T+P+ E L++ R+ VS L
Sbjct: 32 FNEQPHLLNHLTDN-ERLEFLGDSVLHFVTTTWLFETFPDQDEATLTNWRAALVSTKGLA 90
Query: 827 KLGKQKVFGESMIATKFEPRDNWLPPGYFVPKYLETALIEA 867
+ Q G+ ++ E DN PG + L L EA
Sbjct: 91 ECAAQFNLGQYAYLSRGE--DN---PGGRSRQKLLADLFEA 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,656,206
Number of Sequences: 539616
Number of extensions: 21219077
Number of successful extensions: 68889
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 64996
Number of HSP's gapped (non-prelim): 2930
length of query: 1233
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1104
effective length of database: 121,958,995
effective search space: 134642730480
effective search space used: 134642730480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)