Diaphorina citri psyllid: psy1548
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Spliceosome RNA helicase DDX39B | Splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint. Has both RNA-stimulated ATP binding/hydrolysis activity and ATP-dependent RNA unwinding activity. Even with the stimulation of RNA, the ATPase activity is weak. Can only hydrolyze ATP but not other NTPs. The RNA stimulation of ATPase activity does not have a strong preference for the sequence and length of the RNA. However, ssRNA stimulates the ATPase activity much more strongly than dsRNA. The ATPase and helicase activities are not influenced by U2AF2 and ALYREF/THOC4. | very confident | Q5RE47 |
| Spliceosome RNA helicase DDX39B | Splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint. Has both RNA-stimulated ATP binding/hydrolysis activity and ATP-dependent RNA unwinding activity. Even with the stimulation of RNA, the ATPase activity is weak. Can only hydrolyze ATP but not other NTPs. The RNA stimulation of ATPase activity does not have a strong preference for the sequence and length of the RNA. However, ssRNA stimulates the ATPase activity much more strongly than dsRNA. The ATPase and helicase activities are not influenced by U2AF2 and ALYREF/THOC4. | very confident | Q5WR10 |
| Spliceosome RNA helicase DDX39B | Splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint. Has both RNA-stimulated ATP binding/hydrolysis activity and ATP-dependent RNA unwinding activity. Even with the stimulation of RNA, the ATPase activity is weak. Can only hydrolyze ATP but not other NTPs. The RNA stimulation of ATPase activity does not have a strong preference for the sequence and length of the RNA. However, ssRNA stimulates the ATPase activity much more strongly than dsRNA. The ATPase and helicase activities are not influenced by U2AF2 and ALYREF/THOC4. | very confident | Q5ZHZ0 |
Prediction of Gene Ontology Terms
Prediction of Enzyme Commission Number
| EC Number | Description | Confidence Level | |||||||||
| 3.-.-.- | Hydrolases. | probable | |||||||||
| 3.6.-.- | Acting on acid anhydrides. | probable | |||||||||
| 3.6.4.- | Acting on acid anhydrides; involved in cellular and subcellular movement. | probable | |||||||||
| 3.6.4.13 | RNA helicase. | probable |
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 1T5I, chain A Confidence level:very confident Coverage over the Query: 328-438 View the alignment between query and template View the model in PyMOL |
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Template: 1XTI, chain A Confidence level:very confident Coverage over the Query: 81-99,123-447 View the alignment between query and template View the model in PyMOL |
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Template: 2JGN, chain A Confidence level:very confident Coverage over the Query: 71-143 View the alignment between query and template View the model in PyMOL |
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Template: 1OYW, chain A Confidence level:probable Coverage over the Query: 10-143 View the alignment between query and template View the model in PyMOL |