Query psy15494
Match_columns 149
No_of_seqs 162 out of 1042
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 22:39:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15494.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15494hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4amj_A Beta-1 adrenergic recep 97.2 0.0013 4.4E-08 50.4 8.2 112 12-125 184-303 (315)
2 4eiy_A Adenosine receptor A2A/ 97.1 0.00078 2.7E-08 54.5 6.2 75 53-127 350-430 (447)
3 4ea3_A Fusion protein of nocic 97.0 0.001 3.5E-08 54.5 6.0 74 52-125 332-412 (434)
4 3eml_A Human adenosine A2A rec 96.9 0.0012 4.1E-08 53.9 5.2 77 52-128 390-472 (488)
5 3sn6_R Lysozyme, beta-2 adrene 96.8 0.0029 9.8E-08 53.0 7.1 73 52-125 417-493 (514)
6 1u19_A Rhodopsin; G protein-co 96.7 0.0011 3.9E-08 51.6 3.6 71 52-122 248-323 (349)
7 3uon_A Human M2 muscarinic ace 96.6 0.0022 7.4E-08 52.2 5.2 73 53-125 384-460 (467)
8 4dkl_A MU-type opioid receptor 96.6 0.014 4.7E-07 47.2 9.6 73 52-124 378-457 (464)
9 2ks9_A Substance-P receptor; w 96.5 0.0022 7.4E-08 50.6 4.4 74 52-125 243-324 (364)
10 3pbl_A D(3) dopamine receptor, 96.3 0.0092 3.2E-07 48.7 7.2 74 52-125 396-474 (481)
11 3rze_A Histamine H1 receptor, 96.2 0.0088 3E-07 48.3 6.4 74 52-126 368-446 (452)
12 2z73_A Rhodopsin; visual pigme 96.2 0.016 5.6E-07 47.2 7.9 109 14-122 209-331 (448)
13 2rh1_A Beta-2-adrenergic recep 95.5 0.057 1.9E-06 45.0 8.4 73 52-125 403-479 (500)
14 3odu_A C-X-C chemokine recepto 93.6 0.11 3.6E-06 42.5 5.6 74 52-125 408-495 (502)
15 2lnl_A C-X-C chemokine recepto 93.5 0.77 2.6E-05 34.8 10.1 74 50-123 207-294 (296)
16 3vw7_A Proteinase-activated re 92.8 0.34 1.2E-05 39.3 7.4 74 53-126 386-468 (484)
17 3v2y_A Sphingosine 1-phosphate 92.1 0.28 9.4E-06 41.1 6.2 71 52-125 416-495 (520)
18 4grv_A Neurotensin receptor ty 91.2 0.31 1.1E-05 40.7 5.5 71 52-122 404-486 (510)
19 2koe_A Human cannabinoid recep 75.8 0.25 8.5E-06 27.0 -1.5 18 104-121 19-36 (40)
No 1
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=97.23 E-value=0.0013 Score=50.39 Aligned_cols=112 Identities=16% Similarity=0.185 Sum_probs=57.3
Q ss_pred EEEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCC-Cc---hhhHHHHHHHHHHHhhhhhhhhhcc----cccCCCCCc
Q psy15494 12 WILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNP-AP---IGIRKAARAALILVPLFGLHHILLP----FRPEPKSPW 83 (149)
Q Consensus 12 w~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~-~~---~~~~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~ 83 (149)
..+..|..+++..+..++..+-+. .++.+..+... ++ ++.+|..|..+.++.++-+.|+-.. ....+....
T Consensus 184 ~~~~ip~~ii~~~y~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~ 262 (315)
T 4amj_A 184 ISFYIPLLIMIFVALRVYREAKEQ-IRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLV 262 (315)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 346788888887776544332111 11111111111 11 1235677777777777888887422 111111111
Q ss_pred hHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494 84 EMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ 125 (149)
Q Consensus 84 ~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~ 125 (149)
......+...+..+....=.++|+ .|+|.|+++++.+++.+
T Consensus 263 ~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~ 303 (315)
T 4amj_A 263 PDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPR 303 (315)
T ss_dssp CHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC---
T ss_pred hHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCC
Confidence 122233344455555666777889 89999999999875443
No 2
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=97.11 E-value=0.00078 Score=54.51 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhccc----c-cCCC-CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhhc
Q psy15494 53 RKAARAALILVPLFGLHHILLPF----R-PEPK-SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQR 126 (149)
Q Consensus 53 ~~~~k~~~~L~pLLGltW~~g~~----~-~~~~-~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~~ 126 (149)
+|.+|..+.++.++-+.|+-... . ..++ ......+.++...+..+...+=.++|++.|++.|+++++.+++.++
T Consensus 350 ~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~ 429 (447)
T 4eiy_A 350 VHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL 429 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHh
Confidence 46677778888888888874321 1 1111 1122334455556666667778889999999999999999987664
Q ss_pred C
Q psy15494 127 R 127 (149)
Q Consensus 127 ~ 127 (149)
+
T Consensus 430 r 430 (447)
T 4eiy_A 430 R 430 (447)
T ss_dssp -
T ss_pred c
Confidence 3
No 3
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=97.01 E-value=0.001 Score=54.52 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----cc-cCCC-CCch-HHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHh
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----FR-PEPK-SPWE-MVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRL 124 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~~-~~~~-~~~~-~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~ 124 (149)
.++..|..+.++.++-+.|+-.. .. .... .... .....+...+..+...+=.++|+++|+|.|+++++.+++.
T Consensus 332 ~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~ 411 (434)
T 4ea3_A 332 LRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCAS 411 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC------
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 45677777777878888887421 11 1111 1111 1222233334445556778899999999999999887655
Q ss_pred h
Q psy15494 125 Q 125 (149)
Q Consensus 125 ~ 125 (149)
+
T Consensus 412 ~ 412 (434)
T 4ea3_A 412 A 412 (434)
T ss_dssp -
T ss_pred c
Confidence 4
No 4
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=96.87 E-value=0.0012 Score=53.93 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----cc-cCCC-CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----FR-PEPK-SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ 125 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~~-~~~~-~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~ 125 (149)
-+|.+|..+.++.++-+.|+-.. +. ...+ ........++...+-.+...+=.++|+++|++.|+++++.++++.
T Consensus 390 ~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~ 469 (488)
T 3eml_A 390 EVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV 469 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcc
Confidence 35677888888888888887321 11 1111 122344455666677777788899999999999999999998777
Q ss_pred cCC
Q psy15494 126 RRG 128 (149)
Q Consensus 126 ~~~ 128 (149)
++.
T Consensus 470 ~~~ 472 (488)
T 3eml_A 470 LRQ 472 (488)
T ss_dssp SCC
T ss_pred ccc
Confidence 543
No 5
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=96.79 E-value=0.0029 Score=53.03 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----cccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----FRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ 125 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~ 125 (149)
.+|..|..+.++.++-+.|+-.. +...........+..+...+..+...+=.++|+ +|++.|+++++.+++.+
T Consensus 417 ~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~ 493 (514)
T 3sn6_R 417 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRR 493 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCc
Confidence 35677777777777778887421 111111111222233344444555556667888 89999999998775444
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=96.67 E-value=0.0011 Score=51.64 Aligned_cols=71 Identities=10% Similarity=0.246 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----cc-cCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHH
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----FR-PEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~~-~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~ 122 (149)
.++..|..+.++..+-+.|+-.. +. ...+.........+...+..+....=-++|++.|+|.|+++++.++
T Consensus 248 ~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~ 323 (349)
T 1u19_A 248 EKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLC 323 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhc
Confidence 34566766666667777777421 11 1111111233344555666667777888999999999999999875
No 7
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=96.64 E-value=0.0022 Score=52.15 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhcc----cccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494 53 RKAARAALILVPLFGLHHILLP----FRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ 125 (149)
Q Consensus 53 ~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~ 125 (149)
+|.+|..+.++.++-+.|+-.. +..............+...+..+....=.++|+++|++.|+++++.++..+
T Consensus 384 ~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~ 460 (467)
T 3uon_A 384 KKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHY 460 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhc
Confidence 5778888888888888887421 111111111233445556667777788899999999999999999874333
No 8
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=96.59 E-value=0.014 Score=47.20 Aligned_cols=73 Identities=18% Similarity=0.333 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----cc-cC--CCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHh
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----FR-PE--PKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRL 124 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~~-~~--~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~ 124 (149)
.+|.+|..+.++.++-+.|+-.. +. .. ...........+...+.-+....=.++|+++|+|.|++++|.+++.
T Consensus 378 ~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~~ 457 (464)
T 4dkl_A 378 LRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPT 457 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhccc
Confidence 36788888888888889998432 11 11 1111112222233334555566778899999999999999875443
No 9
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=96.53 E-value=0.0022 Score=50.62 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc-------cccCCC-CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHH
Q psy15494 52 IRKAARAALILVPLFGLHHILLP-------FRPEPK-SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYR 123 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~-~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r 123 (149)
.+|..|..+.++.++-+.|+-.. +..... .........+...+..+....=-++|++.|+|.|+++++.+++
T Consensus 243 ~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 322 (364)
T 2ks9_A 243 KRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRC 322 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSS
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 45677877777778888886321 111110 0011112223333444455667789999999999999998865
Q ss_pred hh
Q psy15494 124 LQ 125 (149)
Q Consensus 124 ~~ 125 (149)
++
T Consensus 323 ~~ 324 (364)
T 2ks9_A 323 CP 324 (364)
T ss_dssp SC
T ss_pred cC
Confidence 44
No 10
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=96.35 E-value=0.0092 Score=48.67 Aligned_cols=74 Identities=12% Similarity=0.081 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----cccC-CCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----FRPE-PKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ 125 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~~~~-~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~ 125 (149)
.+|.+|..+.++.++-+.|+-.. +... +..........+...+..+....=.++||++|+|.|+++++.++..+
T Consensus 396 ~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~ 474 (481)
T 3pbl_A 396 EKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGR 474 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC--
T ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccC
Confidence 46777888888888888887432 1111 11112222333444455556667788999999999999999885333
No 11
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=96.23 E-value=0.0088 Score=48.29 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----c-ccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhhc
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----F-RPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQR 126 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~-~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~~ 126 (149)
.+|.+|..+.++.++-+.|+-.. + ...... ......++...+..+....=.++|+++|+|.|+++++.+++.++
T Consensus 368 ~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~-~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~ 446 (452)
T 3rze_A 368 ERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC-CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSG 446 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-SCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhccc
Confidence 35778888888888888887321 1 111111 11222334455555666777889999999999999998865443
No 12
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=96.18 E-value=0.016 Score=47.18 Aligned_cols=109 Identities=9% Similarity=0.105 Sum_probs=57.7
Q ss_pred EehhhHHHHHHHHHHHHHHHHHHHh--hccCCCCCCCch-------hhHHHHHHHHHHHhhhhhhhhhcc----cccCCC
Q psy15494 14 LTVPVCLSILVNLAILMNVLRVLLT--KLHSNSTNPAPI-------GIRKAARAALILVPLFGLHHILLP----FRPEPK 80 (149)
Q Consensus 14 f~~Pv~~il~iN~~if~~v~~~l~~--kl~~~~~~~~~~-------~~~~~~k~~~~L~pLLGltW~~g~----~~~~~~ 80 (149)
+.+|.+++++.+..++..+-+.-.+ +........+.+ +.+|.+|..++++.++-+.|+-.. +.....
T Consensus 209 ~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~ 288 (448)
T 2z73_A 209 FFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGP 288 (448)
T ss_dssp THHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 5677777777776665544332111 111111111111 134667777777667777776321 111110
Q ss_pred -CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHH
Q psy15494 81 -SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122 (149)
Q Consensus 81 -~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~ 122 (149)
.........+...+..+...+=.++|+++|+|.|+++++.++
T Consensus 289 ~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 289 LEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp GGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred cccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 001122223334444455567788999999999999999875
No 13
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=95.46 E-value=0.057 Score=44.95 Aligned_cols=73 Identities=12% Similarity=0.102 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc----cccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494 52 IRKAARAALILVPLFGLHHILLP----FRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ 125 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~ 125 (149)
-+|++|..++++.++-+.|+=.+ +..............++..+.-+....=-++|++ |+|.|+++++.+++.+
T Consensus 403 e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~ 479 (500)
T 2rh1_A 403 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRR 479 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhc
Confidence 35778888888889999998432 1111111111122223344444555566677886 9999999999875444
No 14
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=93.58 E-value=0.11 Score=42.51 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHhhhhhhhhhccc-------c---cCCC-CCch---HHHHHHHHHHhhcchhhhhhhhhhcChHHHHHH
Q psy15494 52 IRKAARAALILVPLFGLHHILLPF-------R---PEPK-SPWE---MVYDVFSAVLVSSQGLCVSILFCFANVDVHGAF 117 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~~-------~---~~~~-~~~~---~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~ 117 (149)
.+|.+|..+.++..+-+.|+-... . .... .... ..+.+++..+.-+....=.++|+++|+|.|+++
T Consensus 408 ~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 487 (502)
T 3odu_A 408 KRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSA 487 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHH
Confidence 367788888888888888884211 1 0000 0001 112234444555666778889999999999999
Q ss_pred HHHHHHhh
Q psy15494 118 RKMFYRLQ 125 (149)
Q Consensus 118 ~r~~~r~~ 125 (149)
++.+++.+
T Consensus 488 ~~ll~~~~ 495 (502)
T 3odu_A 488 QHALTSGR 495 (502)
T ss_dssp HHHHSSCS
T ss_pred HHHhccCC
Confidence 99876544
No 15
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=93.50 E-value=0.77 Score=34.80 Aligned_cols=74 Identities=14% Similarity=0.064 Sum_probs=42.6
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhcc-------cccCCCCCc----hH---HHHHHHHHHhhcchhhhhhhhhhcChHHHH
Q psy15494 50 IGIRKAARAALILVPLFGLHHILLP-------FRPEPKSPW----EM---VYDVFSAVLVSSQGLCVSILFCFANVDVHG 115 (149)
Q Consensus 50 ~~~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~~~~----~~---~~~ylF~ilnslQG~fIfl~yC~~n~eVr~ 115 (149)
++.+|..|..+..+..+-+.|.-.. +...+..+. .. ....+...+.-+....=-++|+++|+|.|+
T Consensus 207 ~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~ 286 (296)
T 2lnl_A 207 GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRH 286 (296)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHH
T ss_pred hhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 3446778888888888888887321 111110000 01 111122223333444567799999999999
Q ss_pred HHHHHHHH
Q psy15494 116 AFRKMFYR 123 (149)
Q Consensus 116 ~~~r~~~r 123 (149)
+++|..++
T Consensus 287 ~~~~ll~c 294 (296)
T 2lnl_A 287 GFLKILAM 294 (296)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcC
Confidence 99987643
No 16
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=92.77 E-value=0.34 Score=39.25 Aligned_cols=74 Identities=7% Similarity=-0.024 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhc-c------cccCCCCC-c-hHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHH
Q psy15494 53 RKAARAALILVPLFGLHHILL-P------FRPEPKSP-W-EMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYR 123 (149)
Q Consensus 53 ~~~~k~~~~L~pLLGltW~~g-~------~~~~~~~~-~-~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r 123 (149)
+|++|..+.++.++-+.|+=. + +...+... . .....++...+.-+....=.++|+++|+|.|+++++.+++
T Consensus 386 ~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~ 465 (484)
T 3vw7_A 386 SRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCC 465 (484)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC----------
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhh
Confidence 567777788888888888822 1 11111111 1 1222234444555556677889999999999999998765
Q ss_pred hhc
Q psy15494 124 LQR 126 (149)
Q Consensus 124 ~~~ 126 (149)
.++
T Consensus 466 ~~~ 468 (484)
T 3vw7_A 466 KES 468 (484)
T ss_dssp ---
T ss_pred ccC
Confidence 554
No 17
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=92.10 E-value=0.28 Score=41.08 Aligned_cols=71 Identities=18% Similarity=0.146 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc-------cccCCC-C-CchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHH
Q psy15494 52 IRKAARAALILVPLFGLHHILLP-------FRPEPK-S-PWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~-~-~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~ 122 (149)
-+|.+|..+.++.++-+.|+=.. +..... . .....+...++.+|| .+=-++|+++|++.|+++++.++
T Consensus 416 ~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns---~~NPiiY~~~~~~fr~~~~~~~~ 492 (520)
T 3v2y_A 416 NVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNS---GTNPIIYTLTNKEMRRAFIRIMG 492 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGG---GTHHHHHHHHCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHH---HHHHHHHHHcCHHHHHHHHHHHH
Confidence 35677888888888888888321 111111 0 111222233444555 45566899999999999998776
Q ss_pred Hhh
Q psy15494 123 RLQ 125 (149)
Q Consensus 123 r~~ 125 (149)
+..
T Consensus 493 ~~~ 495 (520)
T 3v2y_A 493 RPL 495 (520)
T ss_dssp SCC
T ss_pred Hhc
Confidence 544
No 18
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=91.17 E-value=0.31 Score=40.73 Aligned_cols=71 Identities=14% Similarity=0.176 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhcc-------cccCCCCCch--HHHHHHHHH---HhhcchhhhhhhhhhcChHHHHHHHH
Q psy15494 52 IRKAARAALILVPLFGLHHILLP-------FRPEPKSPWE--MVYDVFSAV---LVSSQGLCVSILFCFANVDVHGAFRK 119 (149)
Q Consensus 52 ~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~~~~~--~~~~ylF~i---lnslQG~fIfl~yC~~n~eVr~~~~r 119 (149)
.||++|..++++-.+-+.|+=.+ +..+...+.. .+..+++.+ |.-+--..=-++|+++|+|.|++++|
T Consensus 404 erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~ 483 (510)
T 4grv_A 404 LRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLS 483 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 35788888888888999998321 1111111110 111122111 11111223346899999999999998
Q ss_pred HHH
Q psy15494 120 MFY 122 (149)
Q Consensus 120 ~~~ 122 (149)
.++
T Consensus 484 iL~ 486 (510)
T 4grv_A 484 TLA 486 (510)
T ss_dssp ---
T ss_pred HHh
Confidence 764
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=75.77 E-value=0.25 Score=27.02 Aligned_cols=18 Identities=39% Similarity=0.818 Sum_probs=15.1
Q ss_pred hhhhhcChHHHHHHHHHH
Q psy15494 104 ILFCFANVDVHGAFRKMF 121 (149)
Q Consensus 104 l~yC~~n~eVr~~~~r~~ 121 (149)
++|++.|++.|+++++.+
T Consensus 19 iIY~~~~~~fr~~~~~~~ 36 (40)
T 2koe_A 19 IIYALRSKDLRHAFRSMF 36 (40)
T ss_dssp TTTBTTBHHHHHHHTTTC
T ss_pred HHHHHccHHHHHHHHHHh
Confidence 589999999998887654
Done!