Query psy15495
Match_columns 158
No_of_seqs 221 out of 678
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 22:41:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15495.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15495hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n7s_A Calcitonin gene-related 99.9 1.1E-27 3.8E-32 173.8 4.0 87 7-93 27-113 (115)
2 4ers_A GL-R, glucagon receptor 99.9 3.7E-27 1.3E-31 166.0 3.1 81 7-90 13-95 (96)
3 3c5t_A Glucagon-like peptide 1 99.9 8.4E-26 2.9E-30 165.5 5.2 86 8-94 21-108 (122)
4 2qkh_A Glucose-dependent insul 99.9 1.6E-24 5.3E-29 161.1 4.0 89 8-105 41-131 (135)
5 2l27_A Seven transmembrane hel 99.9 4E-23 1.4E-27 142.2 4.8 75 9-93 5-82 (84)
6 2xdg_A Growth hormone-releasin 99.9 9.9E-23 3.4E-27 142.4 4.4 78 7-94 7-85 (92)
7 1u34_A CRFR2B, corticotropin r 99.8 4.4E-22 1.5E-26 144.8 4.9 80 6-94 27-109 (119)
8 2x57_A Vasoactive intestinal p 99.8 3.7E-22 1.3E-26 144.7 2.8 75 8-92 34-109 (116)
9 2jod_A Pituitary adenylate cyc 99.8 4.3E-22 1.5E-26 142.5 2.4 80 7-93 15-100 (106)
10 3h3g_A Fusion protein of malto 99.8 1.6E-21 5.6E-26 170.6 5.7 76 20-95 447-522 (539)
11 3n94_A Fusion protein of malto 99.7 1.5E-19 5.1E-24 155.0 0.8 80 9-95 383-468 (475)
12 3n7s_A Calcitonin gene-related 99.1 2.2E-11 7.7E-16 87.9 3.1 68 65-150 45-114 (115)
13 4ers_A GL-R, glucagon receptor 99.0 4.7E-11 1.6E-15 83.6 2.1 65 65-146 29-95 (96)
14 3c5t_A Glucagon-like peptide 1 98.9 9.3E-10 3.2E-14 80.1 3.3 69 66-150 38-108 (122)
15 3h3g_A Fusion protein of malto 98.7 5.9E-09 2E-13 90.9 3.8 68 65-150 452-521 (539)
16 1u34_A CRFR2B, corticotropin r 98.3 4.2E-07 1.4E-11 65.8 3.0 66 67-155 46-114 (119)
17 4dlq_A Latrophilin-1; GAIN dom 98.1 8.2E-07 2.8E-11 75.1 2.7 58 23-91 20-78 (381)
18 2qkh_A Glucose-dependent insul 98.1 1.1E-06 3.9E-11 64.8 2.4 63 66-151 57-121 (135)
19 2l27_A Seven transmembrane hel 98.0 3.1E-06 1.1E-10 57.6 2.9 58 70-150 25-83 (84)
20 2xdg_A Growth hormone-releasin 97.3 8.7E-05 3E-09 51.1 2.4 60 65-148 22-83 (92)
21 2x57_A Vasoactive intestinal p 97.2 0.00013 4.3E-09 52.5 1.9 61 66-150 49-112 (116)
22 3n94_A Fusion protein of malto 97.1 0.00018 6.1E-09 61.1 2.0 69 65-155 402-472 (475)
23 2jod_A Pituitary adenylate cyc 96.9 0.00059 2E-08 48.1 3.0 61 64-147 35-99 (106)
24 4dlo_A Brain-specific angiogen 96.6 0.00058 2E-08 57.7 1.8 54 25-91 18-75 (382)
25 1bl1_A Parathyroid hormone rec 93.8 0.0045 1.5E-07 34.1 -1.6 21 95-115 11-31 (31)
26 3r62_A H factor 1, complement 93.0 0.16 5.4E-06 35.6 5.0 79 40-129 26-121 (129)
27 1gkn_A Complement receptor typ 91.5 0.094 3.2E-06 36.8 2.3 84 40-131 26-119 (128)
28 2qy0_A Complement C1R subcompo 91.5 0.077 2.6E-06 38.7 1.9 88 40-131 24-133 (159)
29 2a55_A C4B-binding protein; co 90.4 0.085 2.9E-06 37.5 1.2 87 40-133 24-120 (133)
30 3erb_A Complement C2; C3/C5 co 89.7 0.22 7.5E-06 38.2 3.1 88 39-131 20-119 (223)
31 1qub_A Protein (human BETA2-gl 88.2 0.28 9.5E-06 39.8 2.9 85 40-131 81-177 (319)
32 3gov_A MAsp-1; complement, ser 87.9 0.24 8.1E-06 35.7 2.1 87 41-131 27-129 (155)
33 1ly2_A CD21, complement recept 87.7 0.22 7.4E-06 34.7 1.7 84 41-131 23-121 (130)
34 3erb_A Complement C2; C3/C5 co 86.9 0.26 9.1E-06 37.7 1.9 84 42-131 89-179 (223)
35 3sw0_X H factor 1, complement 86.9 0.45 1.5E-05 35.3 3.1 83 40-131 24-116 (188)
36 3hrz_D Complement factor B; se 86.8 0.23 7.8E-06 44.1 1.7 86 42-131 29-128 (741)
37 1gkg_A Complement receptor typ 85.2 0.37 1.3E-05 34.0 1.8 86 39-131 23-130 (136)
38 4ayi_A H factor 1, complement 85.2 0.82 2.8E-05 31.9 3.7 85 39-131 28-120 (125)
39 2aty_A Complement receptor chi 85.1 0.81 2.8E-05 37.2 4.1 86 40-131 22-121 (376)
40 1qub_A Protein (human BETA2-gl 84.8 0.24 8.2E-06 40.2 0.7 83 42-132 147-238 (319)
41 3o8e_B Membrane cofactor prote 81.6 0.72 2.5E-05 35.8 2.3 85 42-131 149-244 (252)
42 1ntl_A CRRY-IG; immunology, co 80.6 1.7 6E-05 37.3 4.6 84 42-131 219-311 (551)
43 1ok3_A CD55, CR, DAF, compleme 80.6 0.83 2.8E-05 35.5 2.3 83 42-131 25-121 (254)
44 2ehf_A CUB and sushi domain-co 77.8 1.7 5.7E-05 27.3 2.8 35 38-75 28-62 (73)
45 2xrb_A Complement regulatory p 77.7 2 6.7E-05 34.2 3.8 84 40-131 58-151 (290)
46 3hrz_D Complement factor B; se 77.5 2.3 8E-05 37.6 4.6 84 42-131 98-188 (741)
47 2uwn_A H factor 1, human compl 77.0 1.3 4.6E-05 32.8 2.4 81 42-131 89-182 (187)
48 2uwn_A H factor 1, human compl 76.7 1.9 6.7E-05 31.9 3.3 81 41-132 29-120 (187)
49 3sw0_X H factor 1, complement 75.8 3.8 0.00013 30.1 4.7 78 41-129 86-180 (188)
50 2yra_A Seizure 6-like protein 74.6 1.5 5E-05 27.6 1.8 33 40-75 26-58 (74)
51 1ok3_A CD55, CR, DAF, compleme 73.4 1.8 6.3E-05 33.5 2.5 86 41-131 88-183 (254)
52 2gsx_A Complement receptor typ 72.4 3.6 0.00012 38.0 4.6 83 42-131 852-943 (951)
53 2c8i_E CD55, complement decay- 72.3 2.7 9.3E-05 33.5 3.3 86 41-131 151-246 (316)
54 1ntj_A Complement receptor rel 71.8 2.3 7.8E-05 34.1 2.7 85 41-131 219-314 (320)
55 1srz_A Gamma-aminobutyric acid 71.6 2 7E-05 26.5 1.9 31 41-75 30-60 (68)
56 1ly2_A CD21, complement recept 71.6 2.2 7.5E-05 29.4 2.3 33 40-75 89-121 (130)
57 1ntj_A Complement receptor rel 71.0 3.7 0.00013 32.8 3.9 85 39-131 24-118 (320)
58 2wii_C H factor 1, complement 70.3 4.9 0.00017 31.6 4.4 86 39-131 28-123 (277)
59 2gsx_A Complement receptor typ 70.0 6.6 0.00023 36.2 5.8 87 41-131 787-882 (951)
60 2wii_C H factor 1, complement 69.5 1.8 6.2E-05 34.1 1.6 82 41-130 92-186 (277)
61 1h03_P Complement decay-accele 69.2 1.6 5.5E-05 30.0 1.2 85 40-131 20-118 (125)
62 3gov_A MAsp-1; complement, ser 66.3 4.3 0.00015 28.8 3.0 36 40-75 94-129 (155)
63 3tvj_A Mannan-binding lectin s 66.3 4.1 0.00014 26.3 2.7 33 40-75 28-62 (86)
64 1haq_A Complement factor H; im 65.5 4.5 0.00015 38.6 3.7 85 40-133 1049-1143(1213)
65 1haq_A Complement factor H; im 61.4 4.3 0.00015 38.7 2.8 80 41-130 991-1079(1213)
66 2c8i_E CD55, complement decay- 60.9 6.9 0.00023 31.1 3.6 83 42-131 213-309 (316)
67 2q7z_A Complement receptor typ 59.4 14 0.00049 36.9 6.2 82 42-131 1117-1207(1931)
68 3iyp_F Complement decay-accele 59.4 3.6 0.00012 34.3 1.6 86 41-131 120-215 (381)
69 1ntl_A CRRY-IG; immunology, co 56.0 13 0.00044 31.8 4.6 89 36-131 77-187 (551)
70 1zjk_A Mannan-binding lectin s 55.8 15 0.00053 30.0 4.9 87 41-131 36-137 (403)
71 3t5o_A Complement component C6 51.2 15 0.0005 34.1 4.5 67 60-131 595-673 (913)
72 3iyp_F Complement decay-accele 50.9 5.7 0.00019 33.1 1.5 84 41-131 181-278 (381)
73 3o8e_B Membrane cofactor prote 49.8 9.4 0.00032 29.3 2.6 32 41-75 213-244 (252)
74 2qy0_A Complement C1R subcompo 49.4 13 0.00044 26.5 3.1 37 39-75 91-133 (159)
75 2yby_A Complement factor H; im 48.4 10 0.00035 25.9 2.3 79 41-131 28-118 (124)
76 2q7z_A Complement receptor typ 47.5 13 0.00045 37.2 3.7 86 39-131 1627-1723(1931)
77 2yby_A Complement factor H; im 45.5 14 0.00047 25.2 2.6 30 42-75 88-118 (124)
78 1gkn_A Complement receptor typ 44.6 10 0.00035 26.0 1.9 35 38-75 82-119 (128)
79 3r62_A H factor 1, complement 43.5 10 0.00035 26.0 1.7 29 41-73 90-121 (129)
80 2aty_A Complement receptor chi 42.0 16 0.00054 29.4 2.8 33 40-75 89-121 (376)
81 1gpz_A Complement C1R componen 39.7 20 0.00069 29.1 3.2 35 41-75 23-60 (399)
82 3t5o_A Complement component C6 38.5 14 0.00048 34.2 2.2 82 42-132 643-733 (913)
83 1gkg_A Complement receptor typ 38.4 24 0.00082 24.2 3.0 37 39-75 87-130 (136)
84 2xrb_A Complement regulatory p 38.4 16 0.00056 28.7 2.3 31 42-75 253-283 (290)
85 2a55_A C4B-binding protein; co 37.3 12 0.0004 26.0 1.2 32 41-75 84-118 (133)
86 1rid_A Complement control prot 33.8 15 0.00052 28.0 1.4 31 42-75 207-237 (244)
87 1rid_A Complement control prot 25.6 35 0.0012 25.9 2.2 86 39-131 24-119 (244)
No 1
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=99.94 E-value=1.1e-27 Score=173.78 Aligned_cols=87 Identities=30% Similarity=0.775 Sum_probs=76.7
Q ss_pred ccccccccccCCCCCCCCCCCcccccccccCCCCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCcccccc
Q psy15495 7 SSLTTLNFMFQTLSLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNY 86 (158)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnY 86 (158)
..+|.++++.++++...+++|+++||+++|||++++|++|+++||.||.+|+..++|+|+|+.+|+|..+++++++|+||
T Consensus 27 ~~~C~~~l~~~~~~~~~~~~C~~twD~~~CWp~t~~G~~v~~~CP~~~~~f~~~g~v~R~C~~~G~W~~~~~~~~~w~NY 106 (115)
T 3n7s_A 27 QYECYQKIMQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNY 106 (115)
T ss_dssp HHHHHHHHTSCCC---CCSEECCEECSSCEECCEETTCEEEEECCSSSTTCCTTSEEEEEBCTTSCBCBCTTTCSBCCBC
T ss_pred HHHHHHHHHhCCCCCCCCCCCcCcccccccCCCCCCCCEEEecCchhhcCCCCCCcEEeecCCCCCcccCCCCCCCcCCh
Confidence 34788899888887667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCcc
Q psy15495 87 TTCIDIE 93 (158)
Q Consensus 87 t~C~~~~ 93 (158)
+.|..+.
T Consensus 107 s~C~~~~ 113 (115)
T 3n7s_A 107 TQCNVNT 113 (115)
T ss_dssp GGGC---
T ss_pred hhhhhcc
Confidence 9998764
No 2
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=99.93 E-value=3.7e-27 Score=166.04 Aligned_cols=81 Identities=27% Similarity=0.625 Sum_probs=72.8
Q ss_pred ccccccccccCCCCCCCCCCCcccccccccCCCCCCCceEEecCCcccccc--ccccceeeeeCCCCeEEecCCCCcccc
Q psy15495 7 SSLTTLNFMFQTLSLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGF--DSRRFALRTCLENGTWFQHPVTRKFWS 84 (158)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~--~~~~~a~R~C~~dG~W~~~p~t~~~wt 84 (158)
+.+|.++|..++|+ ++++||++||+++|||+|+||++|+++||.||++| +..++|+|.|+.||+|..+++ +.+|+
T Consensus 13 ~~eC~~~l~~~~~~--~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~~~a~R~C~~~G~W~~~~~-~~~ws 89 (96)
T 4ers_A 13 GDQCHHNLSLLPPP--TELVCNRTFDKYSCWPDTPANTTANISCPWYLPWHHKVQHRFVFKRCGPDGQWVRGPR-GQPWR 89 (96)
T ss_dssp HHHHHHHHHHSCCC--SSSEECCEECSSCEECCEETTEEEEEECCTTSTTTTTSTTCEEEEEECTTSCBCBCTT-SCBCC
T ss_pred HHHHHHHHHcCCCC--CCCCCCCccCCcccCCCCCCCCEEECCCChhhCcCccCCccceeeecCCCCeEeCCCC-CCCCc
Confidence 46788988888765 68899999999999999999999999999999988 457999999999999998876 67999
Q ss_pred cccccc
Q psy15495 85 NYTTCI 90 (158)
Q Consensus 85 nYt~C~ 90 (158)
||+.|.
T Consensus 90 nYs~C~ 95 (96)
T 4ers_A 90 DASQCQ 95 (96)
T ss_dssp BCTTTC
T ss_pred Cccccc
Confidence 999995
No 3
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=99.92 E-value=8.4e-26 Score=165.51 Aligned_cols=86 Identities=19% Similarity=0.510 Sum_probs=77.3
Q ss_pred cccccccccCCCCCCCCCCCcccccccccCCCCCCCceEEecCCccccccc--cccceeeeeCCCCeEEecCCCCccccc
Q psy15495 8 SLTTLNFMFQTLSLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFD--SRRFALRTCLENGTWFQHPVTRKFWSN 85 (158)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~--~~~~a~R~C~~dG~W~~~p~t~~~wtn 85 (158)
.+|.++|..++++ .++++|+++||+++|||++++|++|.++||+||.+|+ ..++|+|+|++||+|..+++.+..|+|
T Consensus 21 ~~C~~~l~~~~~~-~~g~~C~~twD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~~~~~~~~w~n 99 (122)
T 3c5t_A 21 RQCQRSLTEDPPP-ATDLFCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWLQKDNSSLPWRD 99 (122)
T ss_dssp HHHHHHHHHSCCC-SSSCCBCCEECSSCEECCBCTTEEEEEECCTTSTTGGGCTTCEEEEEECTTSSBCCSSTTCCCCCB
T ss_pred HHHHHHHHhCCCC-CCCCCCCcccCcccccCCCCCCcEEEeeCcchhhCccccccceEecCCCCCCccccCCCCCCCCCC
Confidence 4677888777665 5678999999999999999999999999999999998 689999999999999999988889999
Q ss_pred cccccCcch
Q psy15495 86 YTTCIDIED 94 (158)
Q Consensus 86 Yt~C~~~~~ 94 (158)
|+.|....+
T Consensus 100 y~~C~~~~~ 108 (122)
T 3c5t_A 100 LSECEESKR 108 (122)
T ss_dssp CGGGCSCCC
T ss_pred HHHhcCCCC
Confidence 999987654
No 4
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=99.89 E-value=1.6e-24 Score=161.14 Aligned_cols=89 Identities=26% Similarity=0.523 Sum_probs=69.0
Q ss_pred cccccccccCCCCCCCCCCCcccccccccCCCCCCCceEEecCCccccccc--cccceeeeeCCCCeEEecCCCCccccc
Q psy15495 8 SLTTLNFMFQTLSLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFD--SRRFALRTCLENGTWFQHPVTRKFWSN 85 (158)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~--~~~~a~R~C~~dG~W~~~p~t~~~wtn 85 (158)
.+|.+.|..+++. .+.+|+++||+++|||+|++|++|.++||+||.+|+ ..++|+|+|++||+|. .|++
T Consensus 41 ~~C~~~l~~~~~~--~g~~C~~twD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~g~vsR~C~~dG~W~-------~~~n 111 (135)
T 2qkh_A 41 RECQETLAAAEPP--SGLACNGSFDMYVCWDYAAPNATARASCPWYLPWHHHVAAGFVLRQCGSDGQWG-------LWRD 111 (135)
T ss_dssp HHHHHHHHHCCCC--SSCCBCCEECSSCEECCBCTTEEEEEECCTTSTTHHHHTTCEEEEEECTTSCBC-------SCCB
T ss_pred HHHHHHHHhCCCC--CCCCCCcccCccccCCCCCCCCEEEecCchhhcCcccCCCceEeccCCCCCCCC-------CCCC
Confidence 4577777777655 378999999999999999999999999999999997 6899999999999997 6899
Q ss_pred cccccCcchHHHHHhhhcee
Q psy15495 86 YTTCIDIEDLKVYLFLSCCF 105 (158)
Q Consensus 86 Yt~C~~~~~~~~~~~~~~ly 105 (158)
|+.|...++.+.+..+..||
T Consensus 112 ys~C~~~~~~~~~~~~~~~y 131 (135)
T 2qkh_A 112 HTQCENPEKNEAFLDQRLIL 131 (135)
T ss_dssp CGGGSCCC------------
T ss_pred cccccCcchHHHHHHHHHHH
Confidence 99998876555554444444
No 5
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=99.87 E-value=4e-23 Score=142.23 Aligned_cols=75 Identities=31% Similarity=0.645 Sum_probs=65.7
Q ss_pred ccccccccCCCCCCCCCCCccccccc-ccCCCCCCCceEEecCCccccccc--cccceeeeeCCCCeEEecCCCCccccc
Q psy15495 9 LTTLNFMFQTLSLDSTLYCPTMFDGW-SCWNATLAGETARTPCPNFIVGFD--SRRFALRTCLENGTWFQHPVTRKFWSN 85 (158)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~C~~~wD~~-~CWp~t~~G~~v~~~CP~~~~~~~--~~~~a~R~C~~dG~W~~~p~t~~~wtn 85 (158)
.| ++|+.+++. ++++|+++||++ +|||++++|++|.++||.||.+|+ ..++|+|+|++||+|.. |.|
T Consensus 5 ~C-~~~~~~~~~--~~~~C~~~wD~~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~-------~~n 74 (84)
T 2l27_A 5 HC-ESLSLASNI--SGLQCNASVDLIGTCWPRSPAGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAA-------RVN 74 (84)
T ss_dssp HH-HHTTCCCCC--CSCBCCCSCSSSSCCCCCCBSSBCCBCCCCSSBTTBCCCCSSCCBCCEETTTEECS-------CCC
T ss_pred HH-HHHHhCCCC--CCCCCCccccCccccCCCCCCCCEEEecCchhhcCcccCcCCceecCCCCCCcCCC-------cCC
Confidence 45 788877543 688999999999 999999999999999999999976 57999999999999973 689
Q ss_pred cccccCcc
Q psy15495 86 YTTCIDIE 93 (158)
Q Consensus 86 Yt~C~~~~ 93 (158)
|+.|....
T Consensus 75 y~~C~~~~ 82 (84)
T 2l27_A 75 YSECQEIL 82 (84)
T ss_dssp GGGSCCCC
T ss_pred HHHHhhhc
Confidence 99997653
No 6
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens}
Probab=99.86 E-value=9.9e-23 Score=142.45 Aligned_cols=78 Identities=27% Similarity=0.527 Sum_probs=66.8
Q ss_pred ccccccccccCCCCCCCCCCCcccccccccCCCCCCCceEEecCCccccccc-cccceeeeeCCCCeEEecCCCCccccc
Q psy15495 7 SSLTTLNFMFQTLSLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFD-SRRFALRTCLENGTWFQHPVTRKFWSN 85 (158)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~-~~~~a~R~C~~dG~W~~~p~t~~~wtn 85 (158)
..+|.++|..+++ ++.+|+++||+++|||++++|++|.++||.||.+|+ ..++|+|+|+.+| |. ..|++
T Consensus 7 ~~~C~~~l~~~~~---~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~~v~R~C~~~G-W~------~~~~~ 76 (92)
T 2xdg_A 7 ESACLQAAEEMPQ---TTLGCPATWDGLLCWPTAGSGEWVTLPCPDFFSHFSSESGAVKRDCTITG-WS------EPFPP 76 (92)
T ss_dssp HHHHHHHHTTSCS---SCSSBCCEECSSCEECCBCTTEEEEECCCGGGGGTCSSCCCEEEEEETTE-EC------CCBSC
T ss_pred HHHHHHHHHhCCC---CCCCCCcccCcccccCCCCCCCEEEecCcchhccccccCCeEecCCCccc-CC------CCcCC
Confidence 3568888887764 478999999999999999999999999999999987 5799999999999 84 36889
Q ss_pred cccccCcch
Q psy15495 86 YTTCIDIED 94 (158)
Q Consensus 86 Yt~C~~~~~ 94 (158)
|..|..+.+
T Consensus 77 y~~~C~~~~ 85 (92)
T 2xdg_A 77 YPVACPVPL 85 (92)
T ss_dssp HHHHSCCCG
T ss_pred cccccccCC
Confidence 977766543
No 7
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=99.85 E-value=4.4e-22 Score=144.84 Aligned_cols=80 Identities=33% Similarity=0.658 Sum_probs=66.0
Q ss_pred CccccccccccCCCCCCCCCCCccccccc-ccCCCCCCCceEEecCCccccc--cccccceeeeeCCCCeEEecCCCCcc
Q psy15495 6 TSSLTTLNFMFQTLSLDSTLYCPTMFDGW-SCWNATLAGETARTPCPNFIVG--FDSRRFALRTCLENGTWFQHPVTRKF 82 (158)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~C~~~wD~~-~CWp~t~~G~~v~~~CP~~~~~--~~~~~~a~R~C~~dG~W~~~p~t~~~ 82 (158)
....|.+.+ +++......+|+++||++ +|||++++|++|.++||+||.+ |+..++|+|+|+.||+|. .
T Consensus 27 e~~~C~e~l--~~~~~g~~~~C~~twD~i~~CWp~t~~G~~v~~pCP~~~~~~~~~~~g~vsR~C~~nG~W~-------~ 97 (119)
T 1u34_A 27 LEQYCHRTT--IGNFSGPYTYCNTTLDQIGTCWPQSAPGALVERPCPEYFNGIKYNTTRNAYRECLENGTWA-------S 97 (119)
T ss_dssp TTSCCSCCC--CSSSCCCSSCCCCBCCSSSCCBCCCCTTCBCCCCSSCTTSSSCCCCCCCCCCBCCTTSCCC-------S
T ss_pred HHHHHHHHh--cCCccCCCCCCCccccChhhcCCCCCCCCEEEecCccccCCcccCCCCeeecCCCCCCcCC-------C
Confidence 355677777 333311123499999999 9999999999999999999999 677899999999999996 5
Q ss_pred ccccccccCcch
Q psy15495 83 WSNYTTCIDIED 94 (158)
Q Consensus 83 wtnYt~C~~~~~ 94 (158)
|.||+.|....+
T Consensus 98 ~~nys~C~~~~~ 109 (119)
T 1u34_A 98 RVNYSHCEPILD 109 (119)
T ss_dssp CCCCCSSSCCSS
T ss_pred CCChhHhcCccc
Confidence 889999988754
No 8
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=99.84 E-value=3.7e-22 Score=144.71 Aligned_cols=75 Identities=21% Similarity=0.508 Sum_probs=63.8
Q ss_pred cccccccccCCCCCCCCCCCcccccccccCCCCCCCceEEecCCccccccc-cccceeeeeCCCCeEEecCCCCcccccc
Q psy15495 8 SLTTLNFMFQTLSLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFD-SRRFALRTCLENGTWFQHPVTRKFWSNY 86 (158)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~-~~~~a~R~C~~dG~W~~~p~t~~~wtnY 86 (158)
.+|.+++..++++ +.+|+++||+++|||++++|++|.++||+||.+|+ ..++|+|+|+++| |. ..|++|
T Consensus 34 ~~C~~~l~~~~~~---~~~C~~twD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~g~v~R~C~~~G-Ws------~~~p~y 103 (116)
T 2x57_A 34 TKCAELLRSQTEK---HKACSGVWDNITCWRPANVGETVTVPCPKVFSNFYSKAGNISKNCTSDG-WS------ETFPDF 103 (116)
T ss_dssp HHHHHHHHHTTTS---CCSBCCEEETTEEECCBCTTCEEEEECCGGGGGGBSSCCEEEEEEETTE-EC------CCBSCH
T ss_pred HHHHHHHHhCCCC---CCCCCcccCcccccCCCCCCCEEEecCcccccCccCCCCeEEeeCCccc-CC------CCCCCc
Confidence 4678888877654 67899999999999999999999999999999998 6899999999999 95 368886
Q ss_pred ccccCc
Q psy15495 87 TTCIDI 92 (158)
Q Consensus 87 t~C~~~ 92 (158)
..++.+
T Consensus 104 ~~~C~~ 109 (116)
T 2x57_A 104 VDACGY 109 (116)
T ss_dssp HHHHTB
T ss_pred hhhcCC
Confidence 544343
No 9
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=99.84 E-value=4.3e-22 Score=142.53 Aligned_cols=80 Identities=24% Similarity=0.534 Sum_probs=66.1
Q ss_pred ccccccccccCCCC---CCCCCCCcccccccccCCCCCCCceEEecCCcccccccc---ccceeeeeCCCCeEEecCCCC
Q psy15495 7 SSLTTLNFMFQTLS---LDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFDS---RRFALRTCLENGTWFQHPVTR 80 (158)
Q Consensus 7 ~~~~~~~~~~~~~~---~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~---~~~a~R~C~~dG~W~~~p~t~ 80 (158)
..+|.+++..+++. ..++.+|+++||+++|||++++|++|.++||.||.+|+. .++|+|+|+++| |.
T Consensus 15 ~~~C~~~~~~~~~~~~~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~~g~v~R~C~~~G-Ws------ 87 (106)
T 2jod_A 15 QAMCLEKIQRANELMGFNDSSPGCPGMWDNITCWKPAHVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WS------ 87 (106)
T ss_dssp HHHHHHHHHHHHHHCSCTTTSCBCCCEECSSCEECCCBTTCCEEECCSCSSCCCSCCSCCSCEEECBCSSC-BC------
T ss_pred HHHHHHHHHhCCCccccCcCCCCCCcccCcccccCCCCCCCEEEecCcchhcCCCCcCcCCeEEecCCccc-CC------
Confidence 34678888777653 345889999999999999999999999999999999976 469999999999 95
Q ss_pred ccccccccccCcc
Q psy15495 81 KFWSNYTTCIDIE 93 (158)
Q Consensus 81 ~~wtnYt~C~~~~ 93 (158)
..|++|..|+.+.
T Consensus 88 ~~~~~y~~~C~~~ 100 (106)
T 2jod_A 88 EPFPHYFDACGFD 100 (106)
T ss_dssp CCSSCCSSCSCSS
T ss_pred CCCCCchhhhCCC
Confidence 3678876665543
No 10
>3h3g_A Fusion protein of maltose-binding periplasmic DOM human parathyroid hormone receptor...; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli} PDB: 3c4m_A* 3l2j_A*
Probab=99.83 E-value=1.6e-21 Score=170.57 Aligned_cols=76 Identities=30% Similarity=0.687 Sum_probs=69.8
Q ss_pred CCCCCCCCcccccccccCCCCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchH
Q psy15495 20 SLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDL 95 (158)
Q Consensus 20 ~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~ 95 (158)
++.++++|+++||+++|||++++|++|+++||+||.+|+..++|+|+|+.+|+|..+|.++++|+||+.|..+.+.
T Consensus 447 ~~~~~~~c~~~~d~~~cw~~~~~g~~~~~~Cp~~~~~~~~~~~~~r~C~~~g~w~~~~~~~~~~~~y~~c~~~~~~ 522 (539)
T 3h3g_A 447 SRYRGRPCLPEWDHILCWPLGAPGEVVAVPCPDYIYDFNHKGHAYRRCDRNGSWELVPGHNRTWANYSECVKFLTN 522 (539)
T ss_dssp -CTTCCCBCCEECSSCEECCBCTTCEEEEECCTTCTTSCTTCEEEEEBCTTSCBCBCTTSSSBCCBCTTTTTTCC-
T ss_pred CCCCCCCCCcCcCCcCcCCCCCCCCEEEeeCcchhccCCcCCceEeecCCCcccccCCCCCCCCCChhhccCCCCc
Confidence 4446789999999999999999999999999999999999999999999999999999999999999999987543
No 11
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=99.74 E-value=1.5e-19 Score=155.01 Aligned_cols=80 Identities=24% Similarity=0.544 Sum_probs=67.0
Q ss_pred ccccccccCCC---CCCCCCCCcccccccccCCCCCCCceEEecCCccccccccc---cceeeeeCCCCeEEecCCCCcc
Q psy15495 9 LTTLNFMFQTL---SLDSTLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFDSR---RFALRTCLENGTWFQHPVTRKF 82 (158)
Q Consensus 9 ~~~~~~~~~~~---~~~~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~---~~a~R~C~~dG~W~~~p~t~~~ 82 (158)
+|.+.+..+.+ ....+++|+++||+++|||++++|++|+++||.+|.+|+.. ++|+|+|+.+| |.. .
T Consensus 383 ~C~~~~~~~~~~~~~~~~~~~c~~~~d~~~cw~~~~~g~~~~~~cp~~~~~~~~~~~~~~~~r~c~~~g-w~~------~ 455 (475)
T 3n94_A 383 MCLEKIQRANELMGFNDSSPGCPGMWDNITCWKPAHVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSE------P 455 (475)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSBCCEECSSCEECCBCTTCEEEEECCGGGGGTCTTGGGCEEEEEEETTE-ECC------C
T ss_pred HHHHHHHhcccccCCCCCCCCCCCcccccccCCCCCCCCeEecccchhhcCcCcCCCCCceeeecCccc-CCC------C
Confidence 45555555543 23457899999999999999999999999999999999763 89999999999 953 7
Q ss_pred ccccccccCcchH
Q psy15495 83 WSNYTTCIDIEDL 95 (158)
Q Consensus 83 wtnYt~C~~~~~~ 95 (158)
|++|+.|+.+++.
T Consensus 456 ~~~~~~~~~~~~~ 468 (475)
T 3n94_A 456 FPHYFDACGFDEY 468 (475)
T ss_dssp BSCHHHHHSSCSC
T ss_pred CCCHHHHhCCCCC
Confidence 8999999988653
No 12
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=99.12 E-value=2.2e-11 Score=87.90 Aligned_cols=68 Identities=24% Similarity=0.516 Sum_probs=50.5
Q ss_pred eeeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCccccc
Q psy15495 65 RTCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNY 142 (158)
Q Consensus 65 R~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny 142 (158)
..|.. || |.+||.+.++-+....|+.+. .++. +.++|+|.|+.+|+|..||++|++|+||
T Consensus 45 ~~C~~twD~-~~CWp~t~~G~~v~~~CP~~~------------~~f~-----~~g~v~R~C~~~G~W~~~~~~~~~w~NY 106 (115)
T 3n7s_A 45 VYCNRTWDG-WLCWNDVAAGTESMQLCPDYF------------QDFD-----PSEKVTKICDQDGNWFRHPASNRTWTNY 106 (115)
T ss_dssp SEECCEECS-SCEECCEETTCEEEEECCSSS------------TTCC-----TTSEEEEEBCTTSCBCBCTTTCSBCCBC
T ss_pred CCCcCcccc-cccCCCCCCCCEEEecCchhh------------cCCC-----CCCcEEeecCCCCCcccCCCCCCCcCCh
Confidence 34555 66 778888777766777787763 2332 3578999999999999999999999999
Q ss_pred cccccccc
Q psy15495 143 TTCIDIED 150 (158)
Q Consensus 143 ~~C~~~~~ 150 (158)
++|..+.+
T Consensus 107 s~C~~~~~ 114 (115)
T 3n7s_A 107 TQCNVNTH 114 (115)
T ss_dssp GGGC----
T ss_pred hhhhhccC
Confidence 99987654
No 13
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=99.05 E-value=4.7e-11 Score=83.65 Aligned_cols=65 Identities=18% Similarity=0.389 Sum_probs=50.6
Q ss_pred eeeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCccccc
Q psy15495 65 RTCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNY 142 (158)
Q Consensus 65 R~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny 142 (158)
..|.. || |.+||.+.++-+....|+.+. .++. .++.++|+|.|+.||+|++||+ +++|+||
T Consensus 29 ~~C~~~wD~-~~CWp~t~~G~~v~~~CP~~~------------~~~~---~~~~~~a~R~C~~~G~W~~~~~-~~~wsnY 91 (96)
T 4ers_A 29 LVCNRTFDK-YSCWPDTPANTTANISCPWYL------------PWHH---KVQHRFVFKRCGPDGQWVRGPR-GQPWRDA 91 (96)
T ss_dssp SEECCEECS-SCEECCEETTEEEEEECCTTS------------TTTT---TSTTCEEEEEECTTSCBCBCTT-SCBCCBC
T ss_pred CCCCCccCC-cccCCCCCCCCEEECCCChhh------------CcCc---cCCccceeeecCCCCeEeCCCC-CCCCcCc
Confidence 45666 77 888998888877888888763 2221 1245789999999999999986 7899999
Q ss_pred cccc
Q psy15495 143 TTCI 146 (158)
Q Consensus 143 ~~C~ 146 (158)
++|.
T Consensus 92 s~C~ 95 (96)
T 4ers_A 92 SQCQ 95 (96)
T ss_dssp TTTC
T ss_pred cccc
Confidence 9995
No 14
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=98.87 E-value=9.3e-10 Score=80.10 Aligned_cols=69 Identities=14% Similarity=0.237 Sum_probs=53.9
Q ss_pred eeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCcccccc
Q psy15495 66 TCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNYT 143 (158)
Q Consensus 66 ~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny~ 143 (158)
.|.. || |.+||.+.++-.....|+.+. .++. ....++|+|.|+.+|+|++||+++++|+||+
T Consensus 38 ~C~~twD~-~~CWp~t~~G~~v~~~CP~~~------------~~~~---~~~~~~~~R~C~~~G~W~~~~~~~~~w~ny~ 101 (122)
T 3c5t_A 38 FCNRTFDE-YACWPDGEPGSFVNVSCPWYL------------PWAS---SVPQGHVYRFCTAEGLWLQKDNSSLPWRDLS 101 (122)
T ss_dssp CBCCEECS-SCEECCBCTTEEEEEECCTTS------------TTGG---GCTTCEEEEEECTTSSBCCSSTTCCCCCBCG
T ss_pred CCCcccCc-ccccCCCCCCcEEEeeCcchh------------hCcc---ccccceEecCCCCCCccccCCCCCCCCCCHH
Confidence 3555 77 888998888877778898874 2221 0135689999999999999999999999999
Q ss_pred ccccccc
Q psy15495 144 TCIDIED 150 (158)
Q Consensus 144 ~C~~~~~ 150 (158)
+|....+
T Consensus 102 ~C~~~~~ 108 (122)
T 3c5t_A 102 ECEESKR 108 (122)
T ss_dssp GGCSCCC
T ss_pred HhcCCCC
Confidence 9976654
No 15
>3h3g_A Fusion protein of maltose-binding periplasmic DOM human parathyroid hormone receptor...; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli} PDB: 3c4m_A* 3l2j_A*
Probab=98.71 E-value=5.9e-09 Score=90.91 Aligned_cols=68 Identities=25% Similarity=0.445 Sum_probs=53.8
Q ss_pred eeeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCccccc
Q psy15495 65 RTCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNY 142 (158)
Q Consensus 65 R~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny 142 (158)
-.|.. || |.|||.+..+-+....|+.+. .++ .+.++++|.|+++|+|..+|.++++|+||
T Consensus 452 ~~c~~~~d~-~~cw~~~~~g~~~~~~Cp~~~------------~~~-----~~~~~~~r~C~~~g~w~~~~~~~~~~~~y 513 (539)
T 3h3g_A 452 RPCLPEWDH-ILCWPLGAPGEVVAVPCPDYI------------YDF-----NHKGHAYRRCDRNGSWELVPGHNRTWANY 513 (539)
T ss_dssp CCBCCEECS-SCEECCBCTTCEEEEECCTTC------------TTS-----CTTCEEEEEBCTTSCBCBCTTSSSBCCBC
T ss_pred CCCCcCcCC-cCcCCCCCCCCEEEeeCcchh------------ccC-----CcCCceEeecCCCcccccCCCCCCCCCCh
Confidence 35655 77 788888887777777887763 222 14578999999999999999999999999
Q ss_pred cccccccc
Q psy15495 143 TTCIDIED 150 (158)
Q Consensus 143 ~~C~~~~~ 150 (158)
++|..+.+
T Consensus 514 ~~c~~~~~ 521 (539)
T 3h3g_A 514 SECVKFLT 521 (539)
T ss_dssp TTTTTTCC
T ss_pred hhccCCCC
Confidence 99987654
No 16
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=98.26 E-value=4.2e-07 Score=65.79 Aligned_cols=66 Identities=33% Similarity=0.408 Sum_probs=51.0
Q ss_pred eCC--CCeE-EecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCcccccc
Q psy15495 67 CLE--NGTW-FQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNYT 143 (158)
Q Consensus 67 C~~--dG~W-~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny~ 143 (158)
|.. || | .+||.+.++-.....|+.+. .++. .++.++++|.|+.||+| ..|+||+
T Consensus 46 C~~twD~-i~~CWp~t~~G~~v~~pCP~~~------------~~~~---~~~~g~vsR~C~~nG~W-------~~~~nys 102 (119)
T 1u34_A 46 CNTTLDQ-IGTCWPQSAPGALVERPCPEYF------------NGIK---YNTTRNAYRECLENGTW-------ASRVNYS 102 (119)
T ss_dssp CCCBCCS-SSCCBCCCCTTCBCCCCSSCTT------------SSSC---CCCCCCCCCBCCTTSCC-------CSCCCCC
T ss_pred CCccccC-hhhcCCCCCCCCEEEecCcccc------------CCcc---cCCCCeeecCCCCCCcC-------CCCCChh
Confidence 444 78 9 99999988888888999874 2310 12457899999999999 3599999
Q ss_pred cccccccccccc
Q psy15495 144 TCIDIEDLKVST 155 (158)
Q Consensus 144 ~C~~~~~~~~~~ 155 (158)
+|....+++.+.
T Consensus 103 ~C~~~~~~~~~~ 114 (119)
T 1u34_A 103 HCEPILDDKQRK 114 (119)
T ss_dssp SSSCCSSCCCCC
T ss_pred HhcCcccccccc
Confidence 999888877554
No 17
>4dlq_A Latrophilin-1; GAIN domain, includes the GPS motif, hormone binding domain, autoproteolysis, A-latrotoxin, extracellular domain; HET: NAG; 1.85A {Rattus norvegicus}
Probab=98.14 E-value=8.2e-07 Score=75.09 Aligned_cols=58 Identities=28% Similarity=0.540 Sum_probs=48.4
Q ss_pred CCCCCcccccccccCCCCCCCceEEecCCccccccccccceeeeeCC-CCeEEecCCCCccccccccccC
Q psy15495 23 STLYCPTMFDGWSCWNATLAGETARTPCPNFIVGFDSRRFALRTCLE-NGTWFQHPVTRKFWSNYTTCID 91 (158)
Q Consensus 23 ~~~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~-dG~W~~~p~t~~~wtnYt~C~~ 91 (158)
...+|+.++++..+||.|++|+++.++||. ...|.|+|.|.. +|.|.. ..+++..|..
T Consensus 20 ~~~~C~~~~~~~~~Wp~t~~G~~a~~~CP~-----~~~g~a~r~C~~~~g~W~~------~~p~~~~C~s 78 (381)
T 4dlq_A 20 PELFCEPREVRRVQWPATQQGMLVERPCPK-----GTRGIASFQCLPALGLWNP------RGPDLSNCTS 78 (381)
T ss_dssp CCCEECCEEETTEEECCEETTCEEEEECCT-----TCBSEEEEEBCTTTCSBCT------TCCBCTTCBC
T ss_pred ccCCCChhhcCceEECCCCCCCEEeCcCcc-----CCCceEEEEecCCCCEeec------CCCchhhcCc
Confidence 357999999999999999999999999997 245899999985 687862 2467888874
No 18
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=98.09 E-value=1.1e-06 Score=64.81 Aligned_cols=63 Identities=19% Similarity=0.342 Sum_probs=45.3
Q ss_pred eeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCcccccc
Q psy15495 66 TCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNYT 143 (158)
Q Consensus 66 ~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny~ 143 (158)
.|.. || |.+||.+.++-.....|+.+.. ++. ..+.++++|.|++||+|. +|+||+
T Consensus 57 ~C~~twD~-~~CWp~t~~G~~v~~~CP~~~~------------~~~---~~~~g~vsR~C~~dG~W~-------~~~nys 113 (135)
T 2qkh_A 57 ACNGSFDM-YVCWDYAAPNATARASCPWYLP------------WHH---HVAAGFVLRQCGSDGQWG-------LWRDHT 113 (135)
T ss_dssp CBCCEECS-SCEECCBCTTEEEEEECCTTST------------THH---HHTTCEEEEEECTTSCBC-------SCCBCG
T ss_pred CCCcccCc-cccCCCCCCCCEEEecCchhhc------------Ccc---cCCCceEeccCCCCCCCC-------CCCCcc
Confidence 4555 77 7888888888777778888742 110 012467999999999996 899999
Q ss_pred cccccccc
Q psy15495 144 TCIDIEDL 151 (158)
Q Consensus 144 ~C~~~~~~ 151 (158)
+|....+.
T Consensus 114 ~C~~~~~~ 121 (135)
T 2qkh_A 114 QCENPEKN 121 (135)
T ss_dssp GGSCCC--
T ss_pred cccCcchH
Confidence 99776543
No 19
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=98.00 E-value=3.1e-06 Score=57.61 Aligned_cols=58 Identities=22% Similarity=0.335 Sum_probs=44.1
Q ss_pred CCeE-EecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCccccccccccc
Q psy15495 70 NGTW-FQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNYTTCIDI 148 (158)
Q Consensus 70 dG~W-~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny~~C~~~ 148 (158)
|| | .+||.+.++-.....|+.+. .++. ....++++|.|+.+|+|.. |+||++|..+
T Consensus 25 D~-~~~CWp~t~~G~~v~~~CP~~~------------~~~~---~~~~~~~~R~C~~~G~W~~-------~~ny~~C~~~ 81 (84)
T 2l27_A 25 DL-IGTCWPRSPAGQLVVRPCPAFF------------YGVR---YNTTNNGYRECLANGSWAA-------RVNYSECQEI 81 (84)
T ss_dssp SS-SSCCCCCCBSSBCCBCCCCSSB------------TTBC---CCCSSCCBCCEETTTEECS-------CCCGGGSCCC
T ss_pred cC-ccccCCCCCCCCEEEecCchhh------------cCcc---cCcCCceecCCCCCCcCCC-------cCCHHHHhhh
Confidence 77 8 99999988888888898874 2211 0134678999999999964 6899999876
Q ss_pred cc
Q psy15495 149 ED 150 (158)
Q Consensus 149 ~~ 150 (158)
.+
T Consensus 82 ~~ 83 (84)
T 2l27_A 82 LN 83 (84)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 20
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens}
Probab=97.34 E-value=8.7e-05 Score=51.13 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=43.1
Q ss_pred eeeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCccccc
Q psy15495 65 RTCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNY 142 (158)
Q Consensus 65 R~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny 142 (158)
..|.. || |.+||.+.++-.....|+.+.. ++. ...++++|.|+.+| | ..+|.||
T Consensus 22 ~~C~~~wD~-~~CWp~t~~G~~v~~~CP~~~~------------~~~----~~~~~v~R~C~~~G-W------~~~~~~y 77 (92)
T 2xdg_A 22 LGCPATWDG-LLCWPTAGSGEWVTLPCPDFFS------------HFS----SESGAVKRDCTITG-W------SEPFPPY 77 (92)
T ss_dssp SSBCCEECS-SCEECCBCTTEEEEECCCGGGG------------GTC----SSCCCEEEEEETTE-E------CCCBSCH
T ss_pred CCCCcccCc-ccccCCCCCCCEEEecCcchhc------------ccc----ccCCeEecCCCccc-C------CCCcCCc
Confidence 34555 77 8999998888778888988742 211 12468999999999 8 4578999
Q ss_pred cccccc
Q psy15495 143 TTCIDI 148 (158)
Q Consensus 143 ~~C~~~ 148 (158)
+.|-.+
T Consensus 78 ~~~C~~ 83 (92)
T 2xdg_A 78 PVACPV 83 (92)
T ss_dssp HHHSCC
T ss_pred cccccc
Confidence 665443
No 21
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=97.19 E-value=0.00013 Score=52.48 Aligned_cols=61 Identities=10% Similarity=0.199 Sum_probs=43.6
Q ss_pred eeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCccccc-
Q psy15495 66 TCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNY- 142 (158)
Q Consensus 66 ~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny- 142 (158)
.|.. || |.+||.+.++-.....|+.+. .++. -..++++|.|+++| | +++|.||
T Consensus 49 ~C~~twD~-~~CWp~t~~G~~v~~~CP~~~------------~~~~----~~~g~v~R~C~~~G-W------s~~~p~y~ 104 (116)
T 2x57_A 49 ACSGVWDN-ITCWRPANVGETVTVPCPKVF------------SNFY----SKAGNISKNCTSDG-W------SETFPDFV 104 (116)
T ss_dssp SBCCEEET-TEEECCBCTTCEEEEECCGGG------------GGGB----SSCCEEEEEEETTE-E------CCCBSCHH
T ss_pred CCCcccCc-ccccCCCCCCCEEEecCcccc------------cCcc----CCCCeEEeeCCccc-C------CCCCCCch
Confidence 3554 77 788998888877888898874 2221 12568999999999 9 5789885
Q ss_pred cccccccc
Q psy15495 143 TTCIDIED 150 (158)
Q Consensus 143 ~~C~~~~~ 150 (158)
+.|....+
T Consensus 105 ~~C~~~~~ 112 (116)
T 2x57_A 105 DACGYSDP 112 (116)
T ss_dssp HHHTBCCC
T ss_pred hhcCCCCC
Confidence 57765433
No 22
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=97.07 E-value=0.00018 Score=61.12 Aligned_cols=69 Identities=12% Similarity=0.201 Sum_probs=46.4
Q ss_pred eeeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeeecceeEeeeCCCCeEeecCCCCCccccc
Q psy15495 65 RTCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIINLRFALRTCLENGTWFQHPVTRKFWSNY 142 (158)
Q Consensus 65 R~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~~~~a~k~C~~nG~W~~~p~s~~~w~ny 142 (158)
..|.. || +.|||.+..+-.....|+.+. .++.. ....+.++|.|+.+| | +++|.||
T Consensus 402 ~~c~~~~d~-~~cw~~~~~g~~~~~~cp~~~------------~~~~~--~~~~~~~~r~c~~~g-w------~~~~~~~ 459 (475)
T 3n94_A 402 PGCPGMWDN-ITCWKPAHVGEMVLVSCPELF------------RIFNP--DQDMGVVSRNCTEDG-W------SEPFPHY 459 (475)
T ss_dssp CSBCCEECS-SCEECCBCTTCEEEEECCGGG------------GGTCT--TGGGCEEEEEEETTE-E------CCCBSCH
T ss_pred CCCCCcccc-cccCCCCCCCCeEecccchhh------------cCcCc--CCCCCceeeecCccc-C------CCCCCCH
Confidence 35666 66 778888777766777787653 22210 001267999999999 9 6789999
Q ss_pred ccccccccccccc
Q psy15495 143 TTCIDIEDLKVST 155 (158)
Q Consensus 143 ~~C~~~~~~~~~~ 155 (158)
+.|..+++.+...
T Consensus 460 ~~~~~~~~~~~~~ 472 (475)
T 3n94_A 460 FDACGFDEYEHHH 472 (475)
T ss_dssp HHHHSSCSCC---
T ss_pred HHHhCCCCCcccc
Confidence 9998887765543
No 23
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=96.88 E-value=0.00059 Score=48.09 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=42.6
Q ss_pred eeeeCC--CCeEEecCCCCccccccccccCcchHHHHHhhhceecceeeeeeee-cceeEeeeCCCCeEeecCCCCCccc
Q psy15495 64 LRTCLE--NGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFLSCCFNGKKNGLIIN-LRFALRTCLENGTWFQHPVTRKFWS 140 (158)
Q Consensus 64 ~R~C~~--dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~~~ly~gytvgys~~-~~~a~k~C~~nG~W~~~p~s~~~w~ 140 (158)
...|.. || |.+||.+.++-.....|+.+. .++. ... .++++|.|+++| | +++|.
T Consensus 35 ~~~C~~~wD~-~~CWp~t~~G~~v~~~CP~~~------------~~~~---~~~~~g~v~R~C~~~G-W------s~~~~ 91 (106)
T 2jod_A 35 SPGCPGMWDN-ITCWKPAHVGEMVLVSCPELF------------RIFN---PDQDMGVVSRNCTEDG-W------SEPFP 91 (106)
T ss_dssp SCBCCCEECS-SCEECCCBTTCCEEECCSCSS------------CCCS---CCSCCSCEEECBCSSC-B------CCCSS
T ss_pred CCCCCcccCc-ccccCCCCCCCEEEecCcchh------------cCCC---CcCcCCeEEecCCccc-C------CCCCC
Confidence 344665 88 899999988877888898874 2221 011 357999999999 9 56788
Q ss_pred cc-ccccc
Q psy15495 141 NY-TTCID 147 (158)
Q Consensus 141 ny-~~C~~ 147 (158)
|| +.|..
T Consensus 92 ~y~~~C~~ 99 (106)
T 2jod_A 92 HYFDACGF 99 (106)
T ss_dssp CCSSCSCS
T ss_pred CchhhhCC
Confidence 75 45543
No 24
>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS motif, autoproteolytic fold, extra signaling protein; HET: NAG FUL; 2.30A {Homo sapiens}
Probab=96.65 E-value=0.00058 Score=57.71 Aligned_cols=54 Identities=30% Similarity=0.564 Sum_probs=44.2
Q ss_pred CCCcccccccccCCCCCCCceEEecCCccccccccccceeeeeCCC--C--eEEecCCCCccccccccccC
Q psy15495 25 LYCPTMFDGWSCWNATLAGETARTPCPNFIVGFDSRRFALRTCLEN--G--TWFQHPVTRKFWSNYTTCID 91 (158)
Q Consensus 25 ~~C~~~wD~~~CWp~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~d--G--~W~~~p~t~~~wtnYt~C~~ 91 (158)
.+||..+.+-.-||.|++|.++.++||.- ..|.|+|.|..+ | .|.. +++..|..
T Consensus 18 ~~C~~~~~~~i~Wp~T~~G~~a~~~Cp~g-----~~G~a~r~C~~~~~g~~~W~~--------p~~~~CtS 75 (382)
T 4dlo_A 18 EICPEDYLMSMVWKRTPAGDLAFNQCPLN-----ATGTTSRRCSLSLHGVAFWEQ--------PSFARCIS 75 (382)
T ss_dssp CEECCBCTTTSCBCCEETTCEEEECCCTT-----EEEEEEEEEEECTTSCEEECC--------CEEEEEEE
T ss_pred ccCChhhcCceEECCCCCCCeEEccCcCC-----CceeEEEEeCCCCCCceecCC--------CCcccCCC
Confidence 47999999899999999999999999974 346899999964 5 4642 57888964
No 25
>1bl1_A Parathyroid hormone receptor; micelle structures, calciotropic hormones, structures; NMR {Homo sapiens} SCOP: j.15.1.1
Probab=93.77 E-value=0.0045 Score=34.13 Aligned_cols=21 Identities=5% Similarity=-0.254 Sum_probs=17.6
Q ss_pred HHHHHhhhceecceeeeeeee
Q psy15495 95 LKVYLFLSCCFNGKKNGLIIN 115 (158)
Q Consensus 95 ~~~~~~~~~ly~gytvgys~~ 115 (158)
.+.++++..|+++||||||++
T Consensus 11 ~~~~e~FeRL~~iYTVGYSis 31 (31)
T 1bl1_A 11 TREREVFDRLGMIYTVGYSVC 31 (31)
T ss_dssp CCHHHHHHSSHHHHHHHHHCC
T ss_pred cchHHHHhheeeEEEEeeeeC
Confidence 356788999999999999864
No 26
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=92.98 E-value=0.16 Score=35.59 Aligned_cols=79 Identities=16% Similarity=0.367 Sum_probs=48.1
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHH-Hh------hhcee--cceee
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVY-LF------LSCCF--NGKKN 110 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~-~~------~~~ly--~gytv 110 (158)
-..|++|...|... |.-.|...+.|. +|+|.. + ..-.. .|......... .+ ....| .|-+|
T Consensus 26 ~~~g~~v~y~C~~G---y~l~G~~~~~C~-~g~Ws~-~---p~C~~--~C~~p~~~~~g~~i~~~~~~~~~~y~~~g~~v 95 (129)
T 3r62_A 26 YAPASSVEYQCQNL---YQLEGNKRITCR-NGQWSE-P---PKCLH--PCVISREIMENYNIALRWRAKQKLYSRTGESV 95 (129)
T ss_dssp BCTTCEEEEEECTT---CEEESCSEEEEE-TTEECC-C---CEEEC--CEECCHHHHHHHTEEETTTTTCCSEECTTCEE
T ss_pred CCCCCEEEEECCCC---CEeCCCCeeEcC-CCcCCC-C---CCccC--cCCCChhhhcccceeeeecccccccccCCCEE
Confidence 35789999999863 333566789999 999972 1 11222 56654322111 11 12233 47777
Q ss_pred eeeeecce-----e---EeeeCCCCeE
Q psy15495 111 GLIINLRF-----A---LRTCLENGTW 129 (158)
Q Consensus 111 gys~~~~~-----a---~k~C~~nG~W 129 (158)
.|.|..++ . ...|. +|+|
T Consensus 96 ~f~C~~Gy~l~G~~~~~~~~C~-~G~W 121 (129)
T 3r62_A 96 EFVCKRGYRLSSRSHTLRTTCW-DGKL 121 (129)
T ss_dssp EEEECTTEEECTTSCCSEEECB-TTBC
T ss_pred EEEeCCCccccCCCCcceEEeC-CCcC
Confidence 78777442 3 78899 8999
No 27
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=91.55 E-value=0.094 Score=36.83 Aligned_cols=84 Identities=17% Similarity=0.235 Sum_probs=50.4
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh--hhceecceeeeeeeecc
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF--LSCCFNGKKNGLIINLR 117 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~--~~~ly~gytvgys~~~~ 117 (158)
-..|++|...|..- | -.|...+.|..+|+|..... .-. -..|.......-..+ ...+..|-++.|.|..+
T Consensus 26 ~~~g~~~~y~C~~G---y-l~G~~~~~C~~~g~Ws~~~p---~C~-~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~G 97 (128)
T 1gkn_A 26 FPIGTSLKYECRPE---Y-YGRPFSITCLDNLVWSSPKD---VCK-RKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTG 97 (128)
T ss_dssp EESSCEEEEEECTT---E-ESCCEEEEBCSSSCBCCCCS---CCE-ECBCCCCCCCTTEEEEESSCCBTTCEEEEEECTT
T ss_pred cCCCCEEEEEcCCC---C-cCCCCceEECCCCcCCCCCC---eEc-ceECcCCCCCCCcEEEeccCCccCCEEEEEeCCC
Confidence 45799999999874 4 35778999999999974210 111 124554321110000 01223466666777643
Q ss_pred -----eeEeeeCCCCe---Eee
Q psy15495 118 -----FALRTCLENGT---WFQ 131 (158)
Q Consensus 118 -----~a~k~C~~nG~---W~~ 131 (158)
...+.|..+|+ |..
T Consensus 98 y~l~G~~~~~C~~~G~~~~Ws~ 119 (128)
T 1gkn_A 98 HRLIGHSSAECILSGNTAHWST 119 (128)
T ss_dssp EECCSCSEEEEEECSSSEEESS
T ss_pred CEEccCCceEEcCCCCcCCccC
Confidence 35789999999 964
No 28
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=91.48 E-value=0.077 Score=38.70 Aligned_cols=88 Identities=14% Similarity=0.210 Sum_probs=48.7
Q ss_pred CCCCceEEecCCccccccccc---cceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh-----hhceecceeee
Q psy15495 40 TLAGETARTPCPNFIVGFDSR---RFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF-----LSCCFNGKKNG 111 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~---~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~-----~~~ly~gytvg 111 (158)
-..|.+|...|-.-+...... +...+.|..||+|.... ..- .-..|..........+ -..+..+-++.
T Consensus 24 ~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~---p~C-~~~~C~~p~~~~nG~~~~~~~~~~~~~g~~v~ 99 (159)
T 2qy0_A 24 YQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAM---PRC-KIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQ 99 (159)
T ss_dssp CBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCC---CEE-EECBCCSCCCCTTEEEEESSSTTCCBTTCEEE
T ss_pred cccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCC---Ccc-ccccCCCCCCCCCCeeEeccCCCCcccCCEEE
Confidence 457899999998643221111 14789999999997410 000 1124654321110000 01223456666
Q ss_pred eeeecce--------------eEeeeCCCCeEee
Q psy15495 112 LIINLRF--------------ALRTCLENGTWFQ 131 (158)
Q Consensus 112 ys~~~~~--------------a~k~C~~nG~W~~ 131 (158)
|.|...+ ..+.|..+|+|..
T Consensus 100 y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~ 133 (159)
T 2qy0_A 100 YYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKN 133 (159)
T ss_dssp EEECTTTEEECCC---CCSSTTEEEECTTSSEEB
T ss_pred EECCCcceecccccCccccCCccEEECCCccCCC
Confidence 7776432 4678999999975
No 29
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=90.45 E-value=0.085 Score=37.53 Aligned_cols=87 Identities=18% Similarity=0.231 Sum_probs=50.4
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh--hhceecceeeeeeeecc
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF--LSCCFNGKKNGLIINLR 117 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~--~~~ly~gytvgys~~~~ 117 (158)
-..|++|...|..-+. ...|...+.|..+|+|.. .. .-. -..|.......-..+ -..+..|-++.|.|..+
T Consensus 24 y~~g~~v~y~C~~Gy~--~l~G~~~~~C~~~G~Ws~-~p---~C~-~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~G 96 (133)
T 2a55_A 24 FKTGTTLKYTCLPGYV--RSHSTQTLTCNSDGEWVY-NT---FCI-YKRCRHPGELRNGQVEIKTDLSFGSQIEFSCSEG 96 (133)
T ss_dssp CCTTCCCCCBCCTTEE--SCCSCCCCEECSSSSEEC-CC---CSE-ECBCCCCCCCTTBCCCCCSTTBSSCBCCCCBCTT
T ss_pred cCCCCEEEEEeCCCCc--ccCCCCEEEECCCCeECC-CC---cCc-cCCCcCCCccCCceEEcCCCCcCCCEEEEEcCCC
Confidence 3579999999986331 335788999999999985 11 111 124544321100000 01123455666666633
Q ss_pred -----eeEeeeCCCC---eEeecC
Q psy15495 118 -----FALRTCLENG---TWFQHP 133 (158)
Q Consensus 118 -----~a~k~C~~nG---~W~~~p 133 (158)
...+.|..+| +|...+
T Consensus 97 y~L~G~~~~~C~~~G~~~~Ws~~~ 120 (133)
T 2a55_A 97 FFLIGSTTSRCEVQDRGVGWSHPL 120 (133)
T ss_dssp CBCCSCSCCBCCCCSSSCCCSCCC
T ss_pred CEEcCCCeeEecCCCCCCEeCCCC
Confidence 3578999999 886543
No 30
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=89.66 E-value=0.22 Score=38.18 Aligned_cols=88 Identities=19% Similarity=0.313 Sum_probs=48.6
Q ss_pred CCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCC----CccccccccccCcchHHHHHh---hhceecceeee
Q psy15495 39 ATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVT----RKFWSNYTTCIDIEDLKVYLF---LSCCFNGKKNG 111 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t----~~~wtnYt~C~~~~~~~~~~~---~~~ly~gytvg 111 (158)
....|++|...|..-+. -.+ +++.|..+|+|...+.. ...-. -..|......+...+ ...+..|-++.
T Consensus 20 ~~~~g~~~~y~C~~Gy~---l~g-~~~~C~~~G~Ws~~~~~~~~~~p~C~-~~~C~~p~~~~nG~~~~~~~~~~~g~~v~ 94 (223)
T 3erb_A 20 GWAPGSLLTYSCPQGLY---PSP-ASRLCKSSGQWQTPGATRSLSKAVCK-PVRCPAPVSFENGIYTPRLGSYPVGGNVS 94 (223)
T ss_dssp TTSTTCEEEEECCTTEE---EES-CEEEECTTSCEECC-------CCEEE-ECEEECCSCCTTEEEESCCSEEETTCEEE
T ss_pred CCcCCCEEEEECCCCCe---ecC-CeeEECCCCeECCCccCCCCCCCeEe-eeECcCCCCCCCCEEecCCCCccCCCEEE
Confidence 34689999999987433 234 45999999999852100 00000 123543321110000 01223455666
Q ss_pred eeeecc-----eeEeeeCCCCeEee
Q psy15495 112 LIINLR-----FALRTCLENGTWFQ 131 (158)
Q Consensus 112 ys~~~~-----~a~k~C~~nG~W~~ 131 (158)
|.|..+ ...+.|..+|+|..
T Consensus 95 ~~C~~Gy~l~G~~~~~C~~~G~Ws~ 119 (223)
T 3erb_A 95 FECEDGFILRGSPVRQCRPNGMWDG 119 (223)
T ss_dssp EEECTTCEEESCSEEEBCTTSCBSS
T ss_pred EEeCCCCEEcCCCceEECCCCeECC
Confidence 666643 34789999999974
No 31
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=88.17 E-value=0.28 Score=39.76 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=48.1
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh-------hhceecceeeee
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF-------LSCCFNGKKNGL 112 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~-------~~~ly~gytvgy 112 (158)
...|.+|...|..- |.-.|...+.|..+|+|....- .- .-..|..........+ -..+..|-++.|
T Consensus 81 ~~~g~~v~~~C~~G---y~l~G~~~~~C~~~G~Ws~~~P---~C-~~~~C~~p~~~~~g~~~~~~~~~~~~~~~g~~v~y 153 (319)
T 1qub_A 81 FEYPNTISFSCNTG---FYLNGADSAKCTEEGKWSPELP---VC-APIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVF 153 (319)
T ss_dssp SBTTCEEEEEECTT---EEEESCSEEEECTTSCEESCCC---EE-EECEECCCCCCTTEEEEECCCSBTTBEETTCEEEE
T ss_pred cccCCEEEEECCCC---ceeCCCCceEECCCCeECCCCC---CC-ccCcCCCCCCCCCceEEecccCCCCceecCCEEEE
Confidence 44677788888753 3335678999999999974210 00 0123544321110000 012234556666
Q ss_pred eeecc-----eeEeeeCCCCeEee
Q psy15495 113 IINLR-----FALRTCLENGTWFQ 131 (158)
Q Consensus 113 s~~~~-----~a~k~C~~nG~W~~ 131 (158)
.|..+ ...+.|..+|+|..
T Consensus 154 ~C~~Gy~l~G~~~~~C~~~G~Ws~ 177 (319)
T 1qub_A 154 ECLPQHAMFGNDTITCTTHGNWTK 177 (319)
T ss_dssp EECTTEEEESCSEEEBCTTSSBSC
T ss_pred EeCCCceecCCCeEEECCCCeECC
Confidence 66643 34789999999974
No 32
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=87.93 E-value=0.24 Score=35.71 Aligned_cols=87 Identities=15% Similarity=0.227 Sum_probs=46.2
Q ss_pred CCCceEEecCCccccccccc---cceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh-----hhceecceeeee
Q psy15495 41 LAGETARTPCPNFIVGFDSR---RFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF-----LSCCFNGKKNGL 112 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~---~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~-----~~~ly~gytvgy 112 (158)
..|++|...|-.-+...... +...+.|..+|+|.... ..- .-..|.......-..+ ...+..|-++.|
T Consensus 27 ~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~---p~C-~~~~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y 102 (155)
T 3gov_A 27 FFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKI---PTC-KIVDCRAPGELEHGLITFSTRNNLTTYKSEIKY 102 (155)
T ss_dssp ETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCC---CEE-EECBCCSCCCCTTEEEEESSTTCCCBTTCEEEE
T ss_pred ccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCC---Cee-eEccCCCCCCCcCceEEecCCCCccccCCEEEE
Confidence 56889999997533221111 12389999999996421 000 1124544321110000 112234556666
Q ss_pred eeecc--------eeEeeeCCCCeEee
Q psy15495 113 IINLR--------FALRTCLENGTWFQ 131 (158)
Q Consensus 113 s~~~~--------~a~k~C~~nG~W~~ 131 (158)
.|..+ ...+.|..+|+|..
T Consensus 103 ~C~~Gy~~l~~~G~~~~~C~~~G~Ws~ 129 (155)
T 3gov_A 103 SCQEPYYKMLNNNTGIYTCSAQGVWMN 129 (155)
T ss_dssp EECTTTEEECTTCCCEEEECTTSCEEB
T ss_pred EeCCChhhhccCCCceEEECCCCeECC
Confidence 66532 24678999999975
No 33
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=87.67 E-value=0.22 Score=34.71 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=48.8
Q ss_pred CCCceEEecCCccccccccccceeeeeCC----CCeEEecCCCCccccc---cccccCcchHHHHHhh---hceecceee
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLE----NGTWFQHPVTRKFWSN---YTTCIDIEDLKVYLFL---SCCFNGKKN 110 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~----dG~W~~~p~t~~~wtn---Yt~C~~~~~~~~~~~~---~~ly~gytv 110 (158)
..|++|...|-.- |.-.|...+.|.. +|+|.... ..-.. -..|....... ..+. ..+..|-++
T Consensus 23 ~~g~~v~y~C~~G---y~l~G~~~~~C~~~~~~~g~Ws~~~---P~C~~~~~~~~C~~p~~~~-g~~~~~~~~~~~g~~v 95 (130)
T 1ly2_A 23 AVGTVIRYSCSGT---FRLIGEKSLLCITKDKVDGTWDKPA---PKCEYFNKYSSCPEPIVPG-GYKIRGSTPYRHGDSV 95 (130)
T ss_dssp ETTCEEEEEECTT---EEEESCSEEEEECSSSSSCEESSCC---CEEEECCTTCEECCCCCTT-EEEEECCSSEETTCEE
T ss_pred cCCCEEEEEcCCC---CEEeCCCeeEEeCCCCCCCeECCCC---CeeEcccCccCCcCCCCCC-CeEecCcccccCCCEE
Confidence 5789999999863 4335678999996 89997421 01111 13454432110 0000 122345666
Q ss_pred eeeeecc-----eeEeeeCCCCeEee
Q psy15495 111 GLIINLR-----FALRTCLENGTWFQ 131 (158)
Q Consensus 111 gys~~~~-----~a~k~C~~nG~W~~ 131 (158)
.|.|..+ ...+.|..+|+|..
T Consensus 96 ~~~C~~Gy~l~G~~~~~C~~~G~Ws~ 121 (130)
T 1ly2_A 96 TFACKTNFSMNGNKSVWCQANNMWGP 121 (130)
T ss_dssp EEEECTTEEEESCSEEEECTTSSEES
T ss_pred EEEeCCCCEEeCCCceEECCCCEECC
Confidence 6666643 34789999999964
No 34
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=86.93 E-value=0.26 Score=37.72 Aligned_cols=84 Identities=21% Similarity=0.239 Sum_probs=46.3
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccc-cccccCcchHHHHH-hhhceecceeeeeeeecc--
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSN-YTTCIDIEDLKVYL-FLSCCFNGKKNGLIINLR-- 117 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtn-Yt~C~~~~~~~~~~-~~~~ly~gytvgys~~~~-- 117 (158)
.|++|...|..- |.-.|...+.|..+|+|.... ..-.. -..|.......-.. .-..+..|-++.|.|..+
T Consensus 89 ~g~~v~~~C~~G---y~l~G~~~~~C~~~G~Ws~~~---P~C~~~~~~C~~p~~~~g~~~~~~~~~~g~~v~~~C~~Gy~ 162 (223)
T 3erb_A 89 VGGNVSFECEDG---FILRGSPVRQCRPNGMWDGET---AVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLV 162 (223)
T ss_dssp TTCEEEEEECTT---CEEESCSEEEBCTTSCBSSCC---CEEECSCSSSCCCCCCTTEEEECCCCSTTCEEEEEECTTCE
T ss_pred CCCEEEEEeCCC---CEEcCCCceEECCCCeECCCC---CEEEeCCccCcCCCCCCCcEecCCCCCCCCEEEEEeCCCCE
Confidence 466677777653 333466789999999997411 01111 12454432110000 011223456677777643
Q ss_pred ---eeEeeeCCCCeEee
Q psy15495 118 ---FALRTCLENGTWFQ 131 (158)
Q Consensus 118 ---~a~k~C~~nG~W~~ 131 (158)
...+.|..+|+|..
T Consensus 163 l~G~~~~~C~~~G~Ws~ 179 (223)
T 3erb_A 163 LTGSSERECQGNGVWSG 179 (223)
T ss_dssp EESCSEEEBCTTSCBSS
T ss_pred EcCCCceEECCCCeECC
Confidence 24789999999974
No 35
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=86.89 E-value=0.45 Score=35.32 Aligned_cols=83 Identities=20% Similarity=0.244 Sum_probs=47.6
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCcccccc-ccccCcchHHHHHh----hhceecceeeeeee
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNY-TTCIDIEDLKVYLF----LSCCFNGKKNGLII 114 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnY-t~C~~~~~~~~~~~----~~~ly~gytvgys~ 114 (158)
-..|++|...|..- |.-.|...+.|. +|+|... ..-... ..|..........+ ...+..|-++.|.|
T Consensus 24 ~~~g~~~~y~C~~G---y~l~G~~~~~C~-~g~Ws~~----p~C~~~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C 95 (188)
T 3sw0_X 24 YPSGERVRYQCRSP---YEMFGDEEVMCL-NGNWTEP----PQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQC 95 (188)
T ss_dssp BCTTCEEEEEECTT---CEEESCSEEEEE-TTEECCC----CEEECTTCCBCSCCCCTTEEESSCCCSCBCTTCEEEEEE
T ss_pred ccCCCEEEEECCCC---CEECCCCEEEeC-CCEeCCC----CccCcCCCcCCCCCccCCCeEecCCCCcccCCCEEEEEc
Confidence 35799999999863 433567799999 9999731 111111 24654321110000 01122355666666
Q ss_pred ecc-----eeEeeeCCCCeEee
Q psy15495 115 NLR-----FALRTCLENGTWFQ 131 (158)
Q Consensus 115 ~~~-----~a~k~C~~nG~W~~ 131 (158)
..+ ...+.|. +|+|..
T Consensus 96 ~~Gy~l~G~~~~~C~-~G~Ws~ 116 (188)
T 3sw0_X 96 QNLYQLEGNKRITCR-NGQWSE 116 (188)
T ss_dssp CTTCEEESCSEEEEE-TTEECC
T ss_pred CCCCEECCCCeEEcC-CCccCC
Confidence 633 3578999 999975
No 36
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=86.81 E-value=0.23 Score=44.13 Aligned_cols=86 Identities=22% Similarity=0.337 Sum_probs=50.3
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCC------CccccccccccCcchHHHHHh---hhceecceeeee
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVT------RKFWSNYTTCIDIEDLKVYLF---LSCCFNGKKNGL 112 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t------~~~wtnYt~C~~~~~~~~~~~---~~~ly~gytvgy 112 (158)
.|++|...|.. ||.-.+..++.|..+|+|...+.. ..... -..|......+-..+ -..+..|-++.|
T Consensus 29 ~g~~~~y~C~~---Gy~l~g~~~~~C~~~g~Ws~~~~~~~~~~~~p~C~-~~~C~~p~~~~ng~~~~~~~~~~~g~~~~~ 104 (741)
T 3hrz_D 29 EGQALEYVCPS---GFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECR-AIHCPRPHDFENGEYWPRSPYYNVSDEISF 104 (741)
T ss_dssp GGTEEEEECCT---TEEEESCSEEEBCTTSCBCCEECTTCCEESCCEEE-ECEECCCSCCTTEEEECCCSSEETTCEEEE
T ss_pred CCCEEEEEeCC---CCEECCCCeEEECCCCcCCCCCcccccCcCCCeEE-eeECcCCCCCCCCEEeccCCCcccCCEEEE
Confidence 79999999997 344456678999999999753110 00011 123544321110000 011234666777
Q ss_pred eeecc-----eeEeeeCCCCeEee
Q psy15495 113 IINLR-----FALRTCLENGTWFQ 131 (158)
Q Consensus 113 s~~~~-----~a~k~C~~nG~W~~ 131 (158)
.|..+ ...+.|..+|+|..
T Consensus 105 ~C~~Gy~l~G~~~~~C~~~g~Ws~ 128 (741)
T 3hrz_D 105 HCYDGYTLRGSANRTCQVNGRWSG 128 (741)
T ss_dssp EECTTCEEESCSEEEBCTTSCBSS
T ss_pred EECCCCccCCCcceEecCCCeEcc
Confidence 77744 34789999999963
No 37
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=85.23 E-value=0.37 Score=33.99 Aligned_cols=86 Identities=17% Similarity=0.235 Sum_probs=49.8
Q ss_pred CCCCCceEEecCCccccccccccceeeeeCCCCe---EEecCCCCccccccccccCcchHHHHHhh----hceecceeee
Q psy15495 39 ATLAGETARTPCPNFIVGFDSRRFALRTCLENGT---WFQHPVTRKFWSNYTTCIDIEDLKVYLFL----SCCFNGKKNG 111 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~---W~~~p~t~~~wtnYt~C~~~~~~~~~~~~----~~ly~gytvg 111 (158)
.-..|++|...|..- |.-.|...+.|..+|+ |...+- .- .-..|..........+. ..+..|-++.
T Consensus 23 ~~~~g~~v~y~C~~G---y~l~G~~~~~C~~~G~~~~Ws~~~P---~C-~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~ 95 (136)
T 1gkg_A 23 DIQVGSRITYSCTTG---HRLIGHSSAECILSGNTAHWSTKPP---IC-QRIPCGLPPTIANGDFISTNRENFHYGSVVT 95 (136)
T ss_dssp CSBTTCEEEEECCSS---EEECSCSEEEEEECSSSEEESSCCC---CE-EECCCCCCCCCTTCCBCSSCSSCCCSSCEEE
T ss_pred CCccCCEEEEECCCC---CeEcCCCceEEeCCCccccccCCCC---CE-EeecCCCCCCCCCCeEEcCCCCccccCCEEE
Confidence 456899999999873 3335678999999999 974210 00 11245543211100110 1122455666
Q ss_pred eeeecc-----------eeEeeeCCC----CeEee
Q psy15495 112 LIINLR-----------FALRTCLEN----GTWFQ 131 (158)
Q Consensus 112 ys~~~~-----------~a~k~C~~n----G~W~~ 131 (158)
|.|..+ ...+.|..+ |+|..
T Consensus 96 y~C~~Gy~~~~~y~l~G~~~~~C~~~~~~~G~Ws~ 130 (136)
T 1gkg_A 96 YRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSG 130 (136)
T ss_dssp BCCCCTTSCCSSCCEESCCEEECCCSSSSSCCCSC
T ss_pred EEeCCCCCccceEEEeCCCeeEECCCCCCCCEECC
Confidence 666533 247899999 99964
No 38
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=85.16 E-value=0.82 Score=31.88 Aligned_cols=85 Identities=16% Similarity=0.216 Sum_probs=44.8
Q ss_pred CCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCc-chHHHHHhhh-ceecceeeeeeeec
Q psy15495 39 ATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDI-EDLKVYLFLS-CCFNGKKNGLIINL 116 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~-~~~~~~~~~~-~ly~gytvgys~~~ 116 (158)
+...|++|+..|-.-+............|..+| |...|. -.. ..|.+. .+... .... .+..|-+|.|.|..
T Consensus 28 p~~~G~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~P~----C~~-~~c~P~i~nG~~-~~~~~~y~~g~~v~y~C~~ 100 (125)
T 4ayi_A 28 PVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVP----CLR-KCYFPYLENGYN-QNHGRKFVQGKSIDVACHP 100 (125)
T ss_dssp SBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EESSSC----CEE-EEECCCCTTBCC-TTTTCEEETTCEEECCBCT
T ss_pred cccCCCEEEEEcCCCCEECCCCccCEEEeCCCc-ccCCCC----CcC-cCCCCCCCCCEE-eCCCCcccCCCEEEEEcCC
Confidence 457899999999863322111222346899999 974221 111 122221 11111 0111 12346677777763
Q ss_pred ------ceeEeeeCCCCeEee
Q psy15495 117 ------RFALRTCLENGTWFQ 131 (158)
Q Consensus 117 ------~~a~k~C~~nG~W~~ 131 (158)
+...+.|..+| |..
T Consensus 101 Gy~l~~g~~~~~C~~~g-Ws~ 120 (125)
T 4ayi_A 101 GYALPKAQTTVTCMENG-WSP 120 (125)
T ss_dssp TCCCGGGCCEEEEETTE-EES
T ss_pred CCEeCCCCceEEECCCc-ccC
Confidence 23478899988 963
No 39
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=85.05 E-value=0.81 Score=37.24 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=50.9
Q ss_pred CCCCceEEecCCccccccccccceeeeeC----CCCeEEecCCCCccccc---cccccCcchHHHHHh--hhceecceee
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCL----ENGTWFQHPVTRKFWSN---YTTCIDIEDLKVYLF--LSCCFNGKKN 110 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~----~dG~W~~~p~t~~~wtn---Yt~C~~~~~~~~~~~--~~~ly~gytv 110 (158)
-..|.+|...|-. ||.-.|...+.|. .+|+|....- .-.. ...|.......-... -..+..|-++
T Consensus 22 ~~~g~~~~y~C~~---Gy~l~G~~~~~C~~~~~~~g~Ws~~~P---~C~~~~~~~~C~~p~~~~~~~~~~~~~~~~g~~~ 95 (376)
T 2aty_A 22 IAVGTVIRYSCSG---TFRLIGEKSLLCITKDKVDGTWDKPAP---KCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSV 95 (376)
T ss_pred ccCCCEEEEEeCC---CCEEcCCCceEEeccCCCCCeECCCCC---ccccccCccEeCCCcCCCCeEecCCCCccCCCEE
Confidence 4689999999986 4444667889999 7999975211 1111 134654321100000 0122345666
Q ss_pred eeeeecc-----eeEeeeCCCCeEee
Q psy15495 111 GLIINLR-----FALRTCLENGTWFQ 131 (158)
Q Consensus 111 gys~~~~-----~a~k~C~~nG~W~~ 131 (158)
.|.|..+ ...+.|..+|+|..
T Consensus 96 ~~~C~~gy~l~G~~~~~C~~~g~Ws~ 121 (376)
T 2aty_A 96 TFACKTNFSMNGNKSVWCQANNMWGP 121 (376)
T ss_pred EEECCCCCEECCCcCeEECCCCEECC
Confidence 6767643 35789999999963
No 40
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=84.77 E-value=0.24 Score=40.15 Aligned_cols=83 Identities=16% Similarity=0.146 Sum_probs=46.0
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh----hhceecceeeeeeeecc
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF----LSCCFNGKKNGLIINLR 117 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~----~~~ly~gytvgys~~~~ 117 (158)
.|++|...|.. +|.-.|...+.|..+|+|...| .-.. ..|.......-..+ ...+..+-+|.|.|..+
T Consensus 147 ~g~~v~y~C~~---Gy~l~G~~~~~C~~~G~Ws~~P----~C~~-v~C~~p~~~~nG~~~~~~~~~~~~g~~v~~~C~~G 218 (319)
T 1qub_A 147 YRDTAVFECLP---QHAMFGNDTITCTTHGNWTKLP----ECRE-VKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDG 218 (319)
T ss_dssp TTCEEEEEECT---TEEEESCSEEEBCTTSSBSCCC----EEEE-CEECCCCCCTTEEEECCSCSSEETTCEEEEEECTT
T ss_pred cCCEEEEEeCC---CceecCCCeEEECCCCeECCCC----ceec-cCCCCCCCCCCCeEecCCCCccccCCEEEEEcCCC
Confidence 46666666764 3333567799999999997311 1001 23543321100000 01223456666767643
Q ss_pred -----eeEeeeCCCCeEeec
Q psy15495 118 -----FALRTCLENGTWFQH 132 (158)
Q Consensus 118 -----~a~k~C~~nG~W~~~ 132 (158)
...+.|..+|+|...
T Consensus 219 y~l~G~~~~~C~~~G~Ws~~ 238 (319)
T 1qub_A 219 YSLDGPEEIECTKLGNWSAM 238 (319)
T ss_dssp EEESSCSEEEBCTTSSBSCC
T ss_pred CEECCCCCeEECCCCcCCCC
Confidence 347899999999753
No 41
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=81.65 E-value=0.72 Score=35.84 Aligned_cols=85 Identities=12% Similarity=0.010 Sum_probs=46.3
Q ss_pred CCceEEecCCccc--cccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHhh----hceecceeeeeeee
Q psy15495 42 AGETARTPCPNFI--VGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFL----SCCFNGKKNGLIIN 115 (158)
Q Consensus 42 ~G~~v~~~CP~~~--~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~----~~ly~gytvgys~~ 115 (158)
.|++|...|..-. .+|.-.|...+.|..+|+|...+- .-. -..|...... ...++ ..+..+-+|.|.|.
T Consensus 149 ~g~~v~y~C~~g~~~~gy~l~G~~~~~C~~~G~Ws~~~P---~C~-~v~C~~P~~~-ng~~~~~~~~~~~~g~~v~f~C~ 223 (252)
T 3o8e_B 149 YLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAP---ECK-VVKCRFPVVE-NGKQISGFGKKFYYKATVMFECD 223 (252)
T ss_dssp TTCEEEEEECCCSSSSCCEEESCSEEEBCTTSSBSSCCC---EEE-CCCBCCCCCT-TEEEEECCCSCBCTTCEEEEEEC
T ss_pred CCCEEEEEeCCCCCCCCeEEeCCCceEECCCCeECCCCC---EEe-eeecCCCccc-CCcEecCCCCccccCCEEEEEeC
Confidence 4777888887510 023334567899999999974110 011 1235432110 00011 12234556666666
Q ss_pred cc-----eeEeeeCCCCeEee
Q psy15495 116 LR-----FALRTCLENGTWFQ 131 (158)
Q Consensus 116 ~~-----~a~k~C~~nG~W~~ 131 (158)
.+ .+.+.|..+|+|..
T Consensus 224 ~Gy~l~G~~~~~C~~~g~Ws~ 244 (252)
T 3o8e_B 224 KGFYLDGSDTIVCDSNSTWDP 244 (252)
T ss_dssp TTEEEESCSEEEECTTSCEES
T ss_pred CCCEEcCCCcEEECCCCeECC
Confidence 43 35789999999974
No 42
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=80.56 E-value=1.7 Score=37.34 Aligned_cols=84 Identities=13% Similarity=0.192 Sum_probs=47.2
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHhh----hceecceeeeeeeecc
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFL----SCCFNGKKNGLIINLR 117 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~----~~ly~gytvgys~~~~ 117 (158)
.|++|...|-. +|.-.|...+.|..+|+|.... ..-.....|............ ..+..|-++.|.|..+
T Consensus 219 ~g~~v~~~C~~---Gy~l~G~~~~~C~~~g~Ws~~~---P~C~~~~~C~~p~~~~~g~~~~~~~~~~~~g~~v~~~C~~G 292 (551)
T 1ntl_A 219 LRDIVEFRCHP---GFIMKGASSVHCQSLNKWEPEL---PSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDG 292 (551)
T ss_pred CCCEEEEECCC---CCEEcCCCCeEECCCCeECCCC---ccccccccCCCCCcCCCCccccCCCCCcccCCEEEEEcCCC
Confidence 57778888865 3444567789999999997321 111111246443211000000 1123455666666633
Q ss_pred -----eeEeeeCCCCeEee
Q psy15495 118 -----FALRTCLENGTWFQ 131 (158)
Q Consensus 118 -----~a~k~C~~nG~W~~ 131 (158)
.....|..+|.|..
T Consensus 293 y~l~G~~~~~C~~~g~W~~ 311 (551)
T 1ntl_A 293 YTLEGSSQSQCQSDGSWNP 311 (551)
T ss_pred cEecCCcceEEeCCCeECC
Confidence 35788999999974
No 43
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=80.56 E-value=0.83 Score=35.53 Aligned_cols=83 Identities=16% Similarity=0.169 Sum_probs=46.7
Q ss_pred CCceEEecCCccccccccccc-eeeeeCCCCeEEecCCCCccccccccccCcchH---HHHH-h--hhceecceeeeeee
Q psy15495 42 AGETARTPCPNFIVGFDSRRF-ALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDL---KVYL-F--LSCCFNGKKNGLII 114 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~-a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~---~~~~-~--~~~ly~gytvgys~ 114 (158)
.|++|...|..-+.. ..+. .++.|..+|+|...+.. -. ..|...... .... + -..+..|-++-|.|
T Consensus 25 ~g~~v~y~C~~Gy~~--~~G~~~~~~C~~~g~Ws~~~p~---C~--~~C~~p~~~~~g~~~~~~~~~~~~~~g~~~~y~C 97 (254)
T 1ok3_A 25 EDTVITYKCEESFVK--IPGEKDSVICLKGSQWSDIEEF---CN--RSCEVPTRLNSASLKQPYITQNYFPVGTVVEYEC 97 (254)
T ss_dssp TTCEEEEEECTTCEE--CTTSCCEEEEETTTEECCCCCC---EE--CCCCSCCCCSSEEECTTGGGCCCCCTTCEEEEEE
T ss_pred CCCEEEEEcCCCcEe--CCCCCCEEEeCCCCCCCCCCCc---CC--CCCCCCCCCCcccccccccccCcCCCCCEEEEEe
Confidence 699999999974321 1233 57899999999752110 00 145433211 0000 0 01122455666666
Q ss_pred ecc-------eeEeeeCCCCeEee
Q psy15495 115 NLR-------FALRTCLENGTWFQ 131 (158)
Q Consensus 115 ~~~-------~a~k~C~~nG~W~~ 131 (158)
..+ ...+.|..+|.|..
T Consensus 98 ~~Gy~l~g~~~~~~~C~~~g~Ws~ 121 (254)
T 1ok3_A 98 RPGYRREPSLSPKLTCLQNLKWST 121 (254)
T ss_dssp CTTEEECTTSCCEEEBCTTSCBCC
T ss_pred CCCceeCCCCCCeEEECCCCeECC
Confidence 633 24689999999974
No 44
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.76 E-value=1.7 Score=27.28 Aligned_cols=35 Identities=29% Similarity=0.555 Sum_probs=26.8
Q ss_pred CCCCCCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 38 NATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 38 p~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
..-..|.+|...|-. +|.-.+...+.|..+|+|..
T Consensus 28 ~~~~~g~~v~f~C~~---Gy~L~G~~~~~C~~~g~Ws~ 62 (73)
T 2ehf_A 28 SSFLHGDTLTFECPA---AFELVGERVITCQQNNQWSG 62 (73)
T ss_dssp SCCCTTCEEEEECCS---SCCBCSCSEEEBCSSSSBSS
T ss_pred CcccCCCEEEEEcCC---CCEEeCCCeEEECCCCeECC
Confidence 345679999999976 34445677999999999974
No 45
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=77.70 E-value=2 Score=34.22 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=48.4
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHH--hhhceecceeeeeeeecc
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYL--FLSCCFNGKKNGLIINLR 117 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~--~~~~ly~gytvgys~~~~ 117 (158)
-..|++|...|..-+. .+...+.|..+|+|..... .- .-..|......+-.. ....+..|-++.|.|..+
T Consensus 58 ~~~g~~~~y~C~~Gy~----~~~~~~~C~~~g~Ws~~~p---~C-~~~~C~~p~~~~nG~~~~~~~~~~G~~v~y~C~~G 129 (290)
T 2xrb_A 58 FPVGTSLKYECRPGYI----KRQFSITCEVNSVWTSPQD---VC-IRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEG 129 (290)
T ss_dssp BCTTCEEEEEECTTBC----CCEEEEEECTTSCEECCTT---CS-CBCBCCCCCCCTTEEEEESSCSBTTCEEEEEECTT
T ss_pred ccCCCEEEEEccCCcC----CCCCeEEECCCCeECCCCC---Cc-CcCCCcCCCCCCCceEecCCCcccCCEEEEECCCC
Confidence 4578999999987431 3456899999999984211 11 112465432111000 011233566666666643
Q ss_pred -----eeEeeeCCCC---eEee
Q psy15495 118 -----FALRTCLENG---TWFQ 131 (158)
Q Consensus 118 -----~a~k~C~~nG---~W~~ 131 (158)
...+.|..+| +|..
T Consensus 130 Y~l~G~~~~~C~~~g~~~~Ws~ 151 (290)
T 2xrb_A 130 YRLIGSSSAMCIISDQSVAWDA 151 (290)
T ss_dssp EEEESCSEEEEEEETTEEEESS
T ss_pred ceeCCCCceEEEeCCCCceeCC
Confidence 3478999988 7863
No 46
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=77.54 E-value=2.3 Score=37.57 Aligned_cols=84 Identities=23% Similarity=0.249 Sum_probs=46.9
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccc-cccccCcchHHHH-Hhhhceecceeeeeeeecc--
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSN-YTTCIDIEDLKVY-LFLSCCFNGKKNGLIINLR-- 117 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtn-Yt~C~~~~~~~~~-~~~~~ly~gytvgys~~~~-- 117 (158)
.|.++...|.. +|.-.|...+.|..+|+|...+ ..... -..|.......-. ..-..+..|-++.|.|..+
T Consensus 98 ~g~~~~~~C~~---Gy~l~G~~~~~C~~~g~Ws~~~---p~C~~~~~~C~~p~~~~~~~~~~~~~~~g~~v~~~C~~gy~ 171 (741)
T 3hrz_D 98 VSDEISFHCYD---GYTLRGSANRTCQVNGRWSGQT---AICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLT 171 (741)
T ss_dssp TTCEEEEEECT---TCEEESCSEEEBCTTSCBSSCC---CEEECSCSSSCCCCCCTTEEEECCCCSTTCEEEEEECTTSE
T ss_pred cCCEEEEEECC---CCccCCCcceEecCCCeEccCc---CeeeccCCcCCCCCCCCCCeeeCCccccCCEEEEEcCCCCE
Confidence 47777777764 3433577889999999996321 01111 1245443211000 0001122455677777744
Q ss_pred ---eeEeeeCCCCeEee
Q psy15495 118 ---FALRTCLENGTWFQ 131 (158)
Q Consensus 118 ---~a~k~C~~nG~W~~ 131 (158)
...+.|..+|+|..
T Consensus 172 l~G~~~~~C~~~g~Ws~ 188 (741)
T 3hrz_D 172 LRGSQRRTCQEGGSWSG 188 (741)
T ss_dssp EESCSEEEBCTTSSBSS
T ss_pred EcCCCeEEECCCCEEeC
Confidence 34789999999973
No 47
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=77.00 E-value=1.3 Score=32.78 Aligned_cols=81 Identities=22% Similarity=0.344 Sum_probs=45.1
Q ss_pred CCceEEecCCcccccccc-ccceeeeeCCCCeEEecCCCCccccccccccCc-chH---HHHHhhhceecceeeeeeeec
Q psy15495 42 AGETARTPCPNFIVGFDS-RRFALRTCLENGTWFQHPVTRKFWSNYTTCIDI-EDL---KVYLFLSCCFNGKKNGLIINL 116 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~-~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~-~~~---~~~~~~~~ly~gytvgys~~~ 116 (158)
.|++|...|.. +|.- .+...+.|..+| |... ..-.....|... ... .....-..+..+-++.|.|..
T Consensus 89 ~g~~v~~~C~~---Gy~l~~G~~~~~C~~~g-Ws~~----P~C~~v~~C~~~p~~~~nG~~~~~~~~y~~g~~v~~~C~~ 160 (187)
T 2uwn_A 89 QGKSIDVACHP---GYALPKAQTTVTCMENG-WSPT----PRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKL 160 (187)
T ss_dssp TTCEEECEECT---TEECSSSCSEEEEETTE-EESC----SCCEECCEEEGGGCCCSSEECCSCCSEEETTCEEEEEECT
T ss_pred CCCEEEEEcCC---CCCccCCCeEEEecCCC-cCCC----CceeecccCCCCCccccCceEcCCCccCcCCCEEEEECCC
Confidence 47777777775 3333 367899999999 9841 111111146441 110 000000112246667777763
Q ss_pred c--------eeEeeeCCCCeEee
Q psy15495 117 R--------FALRTCLENGTWFQ 131 (158)
Q Consensus 117 ~--------~a~k~C~~nG~W~~ 131 (158)
+ -..+.|..+| |..
T Consensus 161 Gy~l~g~~~s~~~~C~~~g-Ws~ 182 (187)
T 2uwn_A 161 GYVTADGETSGSITCGKDG-WSA 182 (187)
T ss_dssp TCCCSSSCSEEEEEEETTE-ESC
T ss_pred CCEecCCCCcCeEEECCCC-cCC
Confidence 2 1689999999 976
No 48
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=76.71 E-value=1.9 Score=31.86 Aligned_cols=81 Identities=19% Similarity=0.232 Sum_probs=45.9
Q ss_pred CCCceEEecCCccccccccccc---eeeeeCCCCeEEecCCCCccccccccccCcc--hHHHHHhhhceecceeeeeeee
Q psy15495 41 LAGETARTPCPNFIVGFDSRRF---ALRTCLENGTWFQHPVTRKFWSNYTTCIDIE--DLKVYLFLSCCFNGKKNGLIIN 115 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~---a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~--~~~~~~~~~~ly~gytvgys~~ 115 (158)
..|.+|...|..- |.-.+. ..+.|..+| |...+ .-.. .|.... +......-..+..|-++.|.|.
T Consensus 29 ~~g~~~~y~C~~G---y~l~g~~~~~~~~C~~~g-Ws~~~----~C~~--~C~~p~~~ng~~~~~~~~~~~g~~v~~~C~ 98 (187)
T 2uwn_A 29 AVGKYYSYYCDEH---FETPSGSYWDHIHCTQDG-WSPAV----PCLR--KCYFPYLENGYNQNHGRKFVQGKSIDVACH 98 (187)
T ss_dssp CTTCEEEEEECTT---EECTTSSSEEEEEEETTE-EESSS----CCEE--EEECCCCTTEECSCTTCEEETTCEEECEEC
T ss_pred cCCCEEEEECCCC---cEecCCccCCEEEeCCCC-CCCCC----CcCC--cCcCCCCCccEEcCCCccccCCCEEEEEcC
Confidence 4799999999874 333333 689999999 97421 1111 354321 1010000011224556666665
Q ss_pred c------ceeEeeeCCCCeEeec
Q psy15495 116 L------RFALRTCLENGTWFQH 132 (158)
Q Consensus 116 ~------~~a~k~C~~nG~W~~~ 132 (158)
. +...+.|..+| |...
T Consensus 99 ~Gy~l~~G~~~~~C~~~g-Ws~~ 120 (187)
T 2uwn_A 99 PGYALPKAQTTVTCMENG-WSPT 120 (187)
T ss_dssp TTEECSSSCSEEEEETTE-EESC
T ss_pred CCCCccCCCeEEEecCCC-cCCC
Confidence 2 34578999999 9753
No 49
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=75.79 E-value=3.8 Score=30.11 Aligned_cols=78 Identities=17% Similarity=0.379 Sum_probs=44.7
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHH--Hhh-----hcee--cceeee
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVY--LFL-----SCCF--NGKKNG 111 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~--~~~-----~~ly--~gytvg 111 (158)
..|++|...|... |.-.|...+.|. +|+|... ..-.. .|......... ..+ ...| .|-+|.
T Consensus 86 ~~g~~v~~~C~~G---y~l~G~~~~~C~-~G~Ws~~----P~C~~--~C~~p~~~~~~~~~~~~~~~~~~~y~~~g~~v~ 155 (188)
T 3sw0_X 86 APASSVEYQCQNL---YQLEGNKRITCR-NGQWSEP----PKCLH--PCVISREIMENYNIALRWTAKQKLYSRTGESVE 155 (188)
T ss_dssp CTTCEEEEEECTT---CEEESCSEEEEE-TTEECCC----CEEEC--CEECCHHHHHHHTEEESCCSSCCCEECTTCEEE
T ss_pred cCCCEEEEEcCCC---CEECCCCeEEcC-CCccCCC----Ccccc--cCCCChHHhccCceeeeccccccccccCCCEEE
Confidence 4688888999763 333566789999 9999741 11111 46544322111 111 1122 466777
Q ss_pred eeeecce-----e---EeeeCCCCeE
Q psy15495 112 LIINLRF-----A---LRTCLENGTW 129 (158)
Q Consensus 112 ys~~~~~-----a---~k~C~~nG~W 129 (158)
|.|..++ . ...|. +|.|
T Consensus 156 ~~C~~Gy~l~G~~~~~~~~C~-~g~w 180 (188)
T 3sw0_X 156 FVCKRGYRLSSRSHTLRTTCW-DGKL 180 (188)
T ss_dssp EEECTTCEECTTCCCSEEECB-TTBC
T ss_pred EECCCCceeCCCCCCeEeEcC-CCcE
Confidence 7777432 2 67888 7878
No 50
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.62 E-value=1.5 Score=27.60 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=25.7
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
...|++|...|-.- |.-.|...+.|..+|+|..
T Consensus 26 ~~~g~~v~y~C~~G---y~L~G~~~~~C~~~g~Ws~ 58 (74)
T 2yra_A 26 LVRGARITYQCDPG---YDIVGSDTLTCQWDLSWSS 58 (74)
T ss_dssp CCTTCEEEEEECTT---EEEESCSEEEBCTTSCBSS
T ss_pred ccCCCEEEEECCCC---CEECCCCceEECCCCEECC
Confidence 46799999999873 3334667999999999973
No 51
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=73.44 E-value=1.8 Score=33.50 Aligned_cols=86 Identities=17% Similarity=0.242 Sum_probs=47.3
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHH--hhhceecceeeeeeeecc-
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYL--FLSCCFNGKKNGLIINLR- 117 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~--~~~~ly~gytvgys~~~~- 117 (158)
..|++|...|..-+.. ...+...+.|..+|.|...+. .- ....|.......-.. .-..+..+-++.|.|..+
T Consensus 88 ~~g~~~~y~C~~Gy~l-~g~~~~~~~C~~~g~Ws~~~p---~C-~~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~Gy 162 (254)
T 1ok3_A 88 PVGTVVEYECRPGYRR-EPSLSPKLTCLQNLKWSTAVE---FC-KKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGY 162 (254)
T ss_dssp CTTCEEEEEECTTEEE-CTTSCCEEEBCTTSCBCCCCC---SE-EECBCCCCCCCTTEEEECTTCSBTTCEEEEEECTTE
T ss_pred CCCCEEEEEeCCCcee-CCCCCCeEEECCCCeECCCCC---ee-CccCCcCCCCCCCCEEEcCCCcEEcCEEEEECCCCc
Confidence 4688888888863321 122356899999999974210 00 113465432110000 001223455666666643
Q ss_pred ----eeEeeeCCCC---eEee
Q psy15495 118 ----FALRTCLENG---TWFQ 131 (158)
Q Consensus 118 ----~a~k~C~~nG---~W~~ 131 (158)
.+.+.|..+| +|..
T Consensus 163 ~l~G~~~~~C~~~G~~~~Ws~ 183 (254)
T 1ok3_A 163 KLFGSTSSFCLISGSSVQWSD 183 (254)
T ss_dssp EEESCSEEEEEEETTEEEESS
T ss_pred eeCCCcceEEEeCCCcccccC
Confidence 3578899988 8974
No 52
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=72.44 E-value=3.6 Score=37.97 Aligned_cols=83 Identities=18% Similarity=0.205 Sum_probs=47.5
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHH-HHH---hhhceecceeeeeeeecc
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLK-VYL---FLSCCFNGKKNGLIINLR 117 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~-~~~---~~~~ly~gytvgys~~~~ 117 (158)
.|.+|...|..- |.-.|...+.|..+|+|....- .-. -..|......+ ... ....+..|.+|.|.|..+
T Consensus 852 ~g~~v~y~C~~G---y~l~G~~~~~C~~~g~Ws~~~p---~C~-~~~C~~p~~~~~~~~~~~~~~~y~~g~~v~f~C~~G 924 (951)
T 2gsx_A 852 PGMSILYSCDQG---YLLVGEALLLCTHEGTWSQPAP---HCK-EVNCSSPADMDGIQKGLEPRKMYQYGAVVTLECEDG 924 (951)
T ss_pred CCCEEEEEcCCC---CEECCCCeeEECCCCEECCCCc---eee-eeeCCCCCCCCCcccccccCCcCcCCCEEEEEcCCC
Confidence 577778888753 3335778899999999975210 011 12354432111 000 001123566776666643
Q ss_pred -----eeEeeeCCCCeEee
Q psy15495 118 -----FALRTCLENGTWFQ 131 (158)
Q Consensus 118 -----~a~k~C~~nG~W~~ 131 (158)
...+.|..+|+|..
T Consensus 925 y~l~G~~~~~C~~~g~Ws~ 943 (951)
T 2gsx_A 925 YMLEGSPQSQCQSDHQWNP 943 (951)
T ss_pred CeECCCCceEECCCCeECC
Confidence 24789999999964
No 53
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=72.30 E-value=2.7 Score=33.54 Aligned_cols=86 Identities=17% Similarity=0.242 Sum_probs=46.5
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHH--hhhceecceeeeeeeecc-
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYL--FLSCCFNGKKNGLIINLR- 117 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~--~~~~ly~gytvgys~~~~- 117 (158)
..|++|...|..-+.. ...+...+.|..+|.|...+. .- ....|......+-.. .-..+..+-++.|.|..+
T Consensus 151 ~~g~~~~y~C~~Gy~l-~g~~~~~~~C~~~g~Ws~~~p---~C-~~~~C~~p~~~~nG~~~~~~~~~~g~~~~~~C~~Gy 225 (316)
T 2c8i_E 151 PVGTVVEYECRPGYRR-EPSLSPKLTCLQNLKWSTAVE---FC-KKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGY 225 (316)
T ss_pred CCCCEEEEEcCCCceE-CCCCCceEEECCCCcCCCCCC---ce-eeeeCcCCCCcCCCEEEcCCCceeCCEEEEEeCCcc
Confidence 3588888888763221 112356899999999974210 00 112454432111000 011223455666666633
Q ss_pred ----eeEeeeCCCC---eEee
Q psy15495 118 ----FALRTCLENG---TWFQ 131 (158)
Q Consensus 118 ----~a~k~C~~nG---~W~~ 131 (158)
...+.|..+| +|..
T Consensus 226 ~l~G~~~~~C~~~g~~~~Ws~ 246 (316)
T 2c8i_E 226 KLFGSTSSFCLISGSSVQWSD 246 (316)
T ss_pred eECCCccEEEecCCCcccccC
Confidence 4578999988 8874
No 54
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=71.80 E-value=2.3 Score=34.08 Aligned_cols=85 Identities=15% Similarity=0.222 Sum_probs=46.4
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcc-hH--HHHHhhhceecceeeeeeeecc
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIE-DL--KVYLFLSCCFNGKKNGLIINLR 117 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~-~~--~~~~~~~~ly~gytvgys~~~~ 117 (158)
..|++|...|.. +|.-.|...+.|..+|+|.... ..-.....|.... .. .....-..+..|-+|.|.|..+
T Consensus 219 ~~g~~v~f~C~~---Gy~l~G~~~~~C~~~g~Ws~~~---P~C~~~~~C~~p~~~~~ng~~~~~~~~~~g~~v~~~C~~G 292 (320)
T 1ntj_A 219 SLRDMVEFRCQD---GFMMKGDSSVYCRSLNRWEPQL---PSCFKVKSCGAFLGELPNGHVFVPQNLQLGAKVTFVCNTG 292 (320)
T ss_pred cCCCEEEEECCC---CCeECCCCCcEECCCCeECCCC---CeeEcccccCCCCCCCCCCeEecCCCcccCCEEEEEcCCC
Confidence 357777777765 3433567789999999996311 0111112464321 10 0000001223455666666533
Q ss_pred -----eeEeeeCCCCe---Eee
Q psy15495 118 -----FALRTCLENGT---WFQ 131 (158)
Q Consensus 118 -----~a~k~C~~nG~---W~~ 131 (158)
...+.|..+|+ |..
T Consensus 293 y~l~G~~~~~C~~~G~~~~Ws~ 314 (320)
T 1ntj_A 293 YQLKGNSSSHCVLDGVESIWNS 314 (320)
T ss_pred CEECCCCcCEeeCCCCcCccCC
Confidence 35789999998 864
No 55
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=71.61 E-value=2 Score=26.51 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=24.3
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
..|.+|...|-.- |.-.|...+.|. +|+|..
T Consensus 30 ~~g~~v~f~C~~G---y~L~G~~~~~C~-~g~Ws~ 60 (68)
T 1srz_A 30 LDGARVEFRCDPD---FHLVGSSRSVCS-QGQWST 60 (68)
T ss_dssp TTTCEEEEEECTT---EEECSCCEEEEE-TTEESS
T ss_pred eCCCEEEEECCCC---CEEeCCCcCEEC-CCEEeC
Confidence 5788999999763 433677899999 999974
No 56
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=71.58 E-value=2.2 Score=29.35 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=23.4
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
...|++|...|..- |.-.|...+.|..+|+|..
T Consensus 89 ~~~g~~v~~~C~~G---y~l~G~~~~~C~~~G~Ws~ 121 (130)
T 1ly2_A 89 YRHGDSVTFACKTN---FSMNGNKSVWCQANNMWGP 121 (130)
T ss_dssp EETTCEEEEEECTT---EEEESCSEEEECTTSSEES
T ss_pred ccCCCEEEEEeCCC---CEEeCCCceEECCCCEECC
Confidence 34577777777653 3334667899999999974
No 57
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=71.01 E-value=3.7 Score=32.79 Aligned_cols=85 Identities=15% Similarity=0.121 Sum_probs=48.5
Q ss_pred CCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHH--Hhhhceecceeeeeeeec
Q psy15495 39 ATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVY--LFLSCCFNGKKNGLIINL 116 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~--~~~~~ly~gytvgys~~~ 116 (158)
.-..|++|...|..-+. .+...+.|..+|.|..... .- .-..|......+.. .....+..|-++.|.|..
T Consensus 24 ~~~~g~~~~y~C~~Gy~----~~~~~~~C~~~g~Ws~~~p---~C-~~~~C~~p~~~~nG~~~~~~~~~~g~~~~y~C~~ 95 (320)
T 1ntj_A 24 TFPVGTSLKYECRPGYI----KRQFSITCEVNSVWTSPQD---VC-IRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNE 95 (320)
T ss_pred cCCCCCEEEEEcCCCCC----CCCCeEEECCCCEECCCCC---cc-ccccCcCCCCCCCCEEECCCCcccCCEEEEEcCC
Confidence 45689999999987432 2346799999999974210 00 11246543211000 001122345566666664
Q ss_pred c-----eeEeeeCCCC---eEee
Q psy15495 117 R-----FALRTCLENG---TWFQ 131 (158)
Q Consensus 117 ~-----~a~k~C~~nG---~W~~ 131 (158)
+ ...+.|..+| .|..
T Consensus 96 Gy~l~G~~~~~C~~~g~~~~Ws~ 118 (320)
T 1ntj_A 96 GYRLIGSSSAMCIISDQSVAWDA 118 (320)
T ss_pred CCEECCCCceEEEeCCCCeeeCC
Confidence 3 3478899988 7974
No 58
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=70.27 E-value=4.9 Score=31.58 Aligned_cols=86 Identities=22% Similarity=0.327 Sum_probs=47.7
Q ss_pred CCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHhh----hceecceeeeeee
Q psy15495 39 ATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFL----SCCFNGKKNGLII 114 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~----~~ly~gytvgys~ 114 (158)
.-..|++|...|.. +|...+...+.|. +|.|....... .- .-..|......+-..+. ..+..|-++.|.|
T Consensus 28 ~~~~g~~~~y~C~~---Gy~l~G~~~~~C~-~g~Ws~~~P~~-~C-~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C 101 (277)
T 2wii_C 28 TYPEGTQAIYKCRP---GYRSLGNIIMVCR-KGEWVALNPLR-KC-QKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTC 101 (277)
T ss_dssp SCCTTCEEEEEECT---TEECSSCEEEEEC-SSSEEESCSSC-CC-EECBCCCCCCCTTEEEEEESSSSSBTTCEEEEEE
T ss_pred CcCCCCEEEEEcCC---CCcCCCCceEEcC-CCeeeCCCCCc-cc-cccCCcCCCCCCCCEEEecCCCcccCCCEEEEEc
Confidence 34689999999986 3444566789996 88898631100 00 11246543221100000 1122455666777
Q ss_pred ecce-----e-EeeeCCCCeEee
Q psy15495 115 NLRF-----A-LRTCLENGTWFQ 131 (158)
Q Consensus 115 ~~~~-----a-~k~C~~nG~W~~ 131 (158)
..++ . .+.|..+| |..
T Consensus 102 ~~Gy~l~G~~~~r~C~~~g-Ws~ 123 (277)
T 2wii_C 102 NEGYQLLGEINYRECDTDG-WTN 123 (277)
T ss_dssp CTTEEEESSCCEEEBCSSS-BCS
T ss_pred CCCceEeCCCceeEeCCCC-cCC
Confidence 6443 2 35899999 974
No 59
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=70.00 E-value=6.6 Score=36.22 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=47.9
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh----hhceecceeeeeeeec
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF----LSCCFNGKKNGLIINL 116 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~----~~~ly~gytvgys~~~ 116 (158)
..|++|...|-. +|.-.|...+.|..||+|....-+= .......|..........+ ...+..|-+|.|.|..
T Consensus 787 ~~g~~v~~~C~~---Gy~l~G~~~~~C~~~g~Ws~~~P~C-~~~~~~~C~~pp~~~ng~~~~~~~~~~~~g~~v~y~C~~ 862 (951)
T 2gsx_A 787 SHNDIVYVDCNP---GFIMNGSRVIRCHTDNTWVPGVPTC-IKKAFIGCPPPPKTPNGNHTGGNIARFSPGMSILYSCDQ 862 (951)
T ss_pred ccCCEEEEEcCC---CcEEeCCceeEEccCCeECCCCcee-ecccccCCCCCCcCCcceeeCCccccccCCCEEEEEcCC
Confidence 356777777754 3444567789999999997421000 0001124644321110000 1122356666676663
Q ss_pred c-----eeEeeeCCCCeEee
Q psy15495 117 R-----FALRTCLENGTWFQ 131 (158)
Q Consensus 117 ~-----~a~k~C~~nG~W~~ 131 (158)
+ .+.+.|..+|+|..
T Consensus 863 Gy~l~G~~~~~C~~~g~Ws~ 882 (951)
T 2gsx_A 863 GYLLVGEALLLCTHEGTWSQ 882 (951)
T ss_pred CCEECCCCeeEECCCCEECC
Confidence 3 35789999999975
No 60
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=69.48 E-value=1.8 Score=34.13 Aligned_cols=82 Identities=16% Similarity=0.239 Sum_probs=43.1
Q ss_pred CCCceEEecCCccccccccccce-eeeeCCCCeEEecCCCCccccccccccCcchHHHHHh-------hhceecceeeee
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFA-LRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF-------LSCCFNGKKNGL 112 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a-~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~-------~~~ly~gytvgy 112 (158)
..|++|...|..- |.-.|.. .|.|..+| |.... ..- ....|......+-..+ -..+..+-++.|
T Consensus 92 ~~g~~v~y~C~~G---y~l~G~~~~r~C~~~g-Ws~~~---P~C-~~~~C~~p~~~~nG~~~~~~~~~~~~~~~g~~v~y 163 (277)
T 2wii_C 92 EYGVKAVYTCNEG---YQLLGEINYRECDTDG-WTNDI---PIC-EVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRF 163 (277)
T ss_dssp BTTCEEEEEECTT---EEEESSCCEEEBCSSS-BCSCC---CEE-EECEECCCCCCTTEECCSSSSCTTCCEETTBEEEC
T ss_pred cCCCEEEEEcCCC---ceEeCCCceeEeCCCC-cCCCC---Ccc-cceeCCCCCcccCCeEEecccccCCcccCCCEEEE
Confidence 3677777777753 3223444 36999999 97411 000 0124543321100000 012234556666
Q ss_pred eeecc-----eeEeeeCCCCeEe
Q psy15495 113 IINLR-----FALRTCLENGTWF 130 (158)
Q Consensus 113 s~~~~-----~a~k~C~~nG~W~ 130 (158)
.|..+ ...+.|..+|+|.
T Consensus 164 ~C~~Gy~L~G~~~~~C~~~G~Ws 186 (277)
T 2wii_C 164 VCNSGYKIEGDEEMHCSDDGFWS 186 (277)
T ss_dssp EECTTEEEESCSEEEBCTTSSBS
T ss_pred EcCCCccCcCCCCCEECCCCeEC
Confidence 66643 3478999999997
No 61
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=69.22 E-value=1.6 Score=29.97 Aligned_cols=85 Identities=15% Similarity=0.134 Sum_probs=48.1
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCC---eEEecCCCCccccccccccCcchHHHHHhh---hceecceeeeee
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENG---TWFQHPVTRKFWSNYTTCIDIEDLKVYLFL---SCCFNGKKNGLI 113 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG---~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~---~~ly~gytvgys 113 (158)
...|++|...|..- |.-.|...+.|..+| +|.... ..- .-..|......+-..+. ..+..+-++.|.
T Consensus 20 ~~~g~~~~~~C~~G---y~l~G~~~~~C~~~g~~~~Ws~~~---p~C-~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~ 92 (125)
T 1h03_P 20 ILFGATISFSCNTG---YKLFGSTSSFCLISGSSVQWSDPL---PEC-REIYCPAPPQIDNGIIQGERDHYGYRQSVTYA 92 (125)
T ss_dssp SBTTCEEEEEECTT---EEEESCSEEEEEEETTEEEESSCC---CEE-EECBCCCCCCCTTEEETTCCSCCBTTCEEEEE
T ss_pred cCcCCEEEEECCCC---CeECCCCeeEEcCCCCCCEeCCCC---CcC-CCCcCCCCCCCCCCEEeCCcCceecCCEEEEE
Confidence 46799999999874 333467799999998 896421 011 11246543211100000 112345566676
Q ss_pred eecc-----eeEeeeCC---CCeEee
Q psy15495 114 INLR-----FALRTCLE---NGTWFQ 131 (158)
Q Consensus 114 ~~~~-----~a~k~C~~---nG~W~~ 131 (158)
|..+ ...+.|.. +|+|..
T Consensus 93 C~~Gy~l~G~~~~~C~~~~~~G~Ws~ 118 (125)
T 1h03_P 93 CNKGFTMIGEHSIYCTVNNDEGEWSG 118 (125)
T ss_dssp ECTTCEEESCSEEEEEEETTEEEESS
T ss_pred ECCCCEECCCCeeEEecCCCCCEECC
Confidence 7643 34688985 699964
No 62
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=66.33 E-value=4.3 Score=28.81 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=24.4
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
...|++|...|-.-+......+...+.|..+|+|..
T Consensus 94 ~~~g~~v~y~C~~Gy~~l~~~G~~~~~C~~~G~Ws~ 129 (155)
T 3gov_A 94 TTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGVWMN 129 (155)
T ss_dssp CBTTCEEEEEECTTTEEECTTCCCEEEECTTSCEEB
T ss_pred cccCCEEEEEeCCChhhhccCCCceEEECCCCeECC
Confidence 356788888887622111222567899999999985
No 63
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=66.30 E-value=4.1 Score=26.31 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=24.1
Q ss_pred CCCCceEEecCCc-cccccccccc-eeeeeCCCCeEEe
Q psy15495 40 TLAGETARTPCPN-FIVGFDSRRF-ALRTCLENGTWFQ 75 (158)
Q Consensus 40 t~~G~~v~~~CP~-~~~~~~~~~~-a~R~C~~dG~W~~ 75 (158)
..-|.+|.-.|-. ++.. .+. ....|..+|+|..
T Consensus 28 ~~~gs~v~y~C~~g~y~l---~g~~~~~~C~~~G~Ws~ 62 (86)
T 3tvj_A 28 TTYKAVIQYSCEETFYTM---KVNDGKYVCDADGFWTS 62 (86)
T ss_dssp CBTTCEEEEEECTTTEEE---CSSCCEEEECTTSSEEE
T ss_pred ccCCCEEEEEcCCCceec---cCCCCEEEECCCCCCCc
Confidence 4678899999976 4222 233 6899999999984
No 64
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=65.48 E-value=4.5 Score=38.59 Aligned_cols=85 Identities=22% Similarity=0.314 Sum_probs=47.5
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCcccccc-ccccCcchHHHHHh----hhceecceeeeeee
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNY-TTCIDIEDLKVYLF----LSCCFNGKKNGLII 114 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnY-t~C~~~~~~~~~~~----~~~ly~gytvgys~ 114 (158)
-..|++|...|.. +|.-.|...+.|. +|+|...| .-... ..|..........+ ...+..+-+|.|.|
T Consensus 1049 ~~~g~~v~~~C~~---gy~l~G~~~~~C~-~G~W~~~p----~C~~~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C 1120 (1213)
T 1haq_A 1049 YPSGERVRYQCRS---PYEMFGDEEVMCL-NGNWTEPP----QCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQC 1120 (1213)
T ss_pred ccCCCEEEEEeCC---CCcccCCceeEcC-CCCcCCCc----eeECCCCCCCCCCCcCCCeeecCCccccCCCCEEEEEC
Confidence 3468888888875 3444677889999 99993211 11111 24654321110011 11223566676666
Q ss_pred ecc-----eeEeeeCCCCeEeecC
Q psy15495 115 NLR-----FALRTCLENGTWFQHP 133 (158)
Q Consensus 115 ~~~-----~a~k~C~~nG~W~~~p 133 (158)
... ...+.| .||+|...|
T Consensus 1121 ~~gy~l~G~~~~~C-~~G~Ws~~P 1143 (1213)
T 1haq_A 1121 QNLYQLEGNKRITC-RNGQWSEPP 1143 (1213)
T ss_pred CCCCEECCCCeeEc-CCCccCCCc
Confidence 632 357889 999997433
No 65
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=61.43 E-value=4.3 Score=38.69 Aligned_cols=80 Identities=23% Similarity=0.402 Sum_probs=46.6
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh----hhceecceeeeeeeec
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF----LSCCFNGKKNGLIINL 116 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~----~~~ly~gytvgys~~~ 116 (158)
..|++|...|.. +|.-.|...+.|. +|+|...|. -. -..|.......-..+ ...+..|-++-|.|..
T Consensus 991 ~~g~~v~y~C~~---Gy~l~G~~~~~C~-~g~Ws~~P~----C~-~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~ 1061 (1213)
T 1haq_A 991 KAGEQVTYTCAT---YYKMDGASNVTCI-NSRWTGRPT----CR-DTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRS 1061 (1213)
T ss_pred EcCCEEEEECCC---CCEecCCCccccc-CCccCCCCc----cc-cccCCCCccccCceEeccCCCcccCCCEEEEEeCC
Confidence 358888888975 3444677889999 999975211 11 124654321110000 1223356667677664
Q ss_pred c-----eeEeeeCCCCeEe
Q psy15495 117 R-----FALRTCLENGTWF 130 (158)
Q Consensus 117 ~-----~a~k~C~~nG~W~ 130 (158)
+ ...+.|. +|+|.
T Consensus 1062 gy~l~G~~~~~C~-~G~W~ 1079 (1213)
T 1haq_A 1062 PYEMFGDEEVMCL-NGNWT 1079 (1213)
T ss_pred CCcccCCceeEcC-CCCcC
Confidence 3 3578899 99994
No 66
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=60.93 E-value=6.9 Score=31.14 Aligned_cols=83 Identities=16% Similarity=0.181 Sum_probs=44.4
Q ss_pred CCceEEecCCccccccccccceeeeeCCCC---eEEecCCCCccccccccccCcchHHHHHh---hhceecceeeeeeee
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENG---TWFQHPVTRKFWSNYTTCIDIEDLKVYLF---LSCCFNGKKNGLIIN 115 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG---~W~~~p~t~~~wtnYt~C~~~~~~~~~~~---~~~ly~gytvgys~~ 115 (158)
.|++|...|.. +|.-.|...+.|..+| +|...+ ..-.. ..|......+-..+ -..+..+-+|.|.|.
T Consensus 213 ~g~~~~~~C~~---Gy~l~G~~~~~C~~~g~~~~Ws~~~---P~C~~-i~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~ 285 (316)
T 2c8i_E 213 FGATISFSCNT---GYKLFGSTSSFCLISGSSVQWSDPL---PECRE-IYCPAPPQIDNGIIQGERDHYGYRQSVTYACN 285 (316)
T ss_pred eCCEEEEEeCC---cceECCCccEEEecCCCcccccCCC---Ccccc-ccCCCCCccCcceEecCCCcccCCCEEEEEcC
Confidence 46666666654 3333577899999988 787421 01111 24654321110000 011224556667666
Q ss_pred cc-----eeEeeeCC---CCeEee
Q psy15495 116 LR-----FALRTCLE---NGTWFQ 131 (158)
Q Consensus 116 ~~-----~a~k~C~~---nG~W~~ 131 (158)
.+ ...+.|.. +|+|..
T Consensus 286 ~gy~l~G~~~~~C~~~~~~g~Ws~ 309 (316)
T 2c8i_E 286 KGFTMIGEHSIYCTVNNDEGEWSG 309 (316)
T ss_pred CCCeEcCCCceEeecCCCCCeECC
Confidence 33 34788985 699965
No 67
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=59.45 E-value=14 Score=36.92 Aligned_cols=82 Identities=16% Similarity=0.160 Sum_probs=46.0
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh----hhceecceeeeeeeecc
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF----LSCCFNGKKNGLIINLR 117 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~----~~~ly~gytvgys~~~~ 117 (158)
.|++|...|-. +|.-.|...+.|..+|+|..... .-.. .|..........+ ...+..|.++-|.|..+
T Consensus 1117 ~g~~v~f~C~~---Gy~l~G~~~~~C~~~g~Ws~~~P---~C~~--~C~~p~~~~~g~~~~~~~~~~~~g~~~~~~C~~G 1188 (1931)
T 2q7z_A 1117 LNEVVEFRCQP---GFVMKGPRRVKCQALNKWEPELP---SCSR--VCQPPPEILHGEHTPSHQDNFSPGQEVFYSCEPG 1188 (1931)
T ss_pred CCCEEEEEcCC---CcEecCCceeEECCCCeECCCCC---cccc--ccCCCCccccCcccccCCcccCCCCEEEEECCCC
Confidence 46666666664 34446778999999999974211 0011 1543321100000 11223466666666633
Q ss_pred -----eeEeeeCCCCeEee
Q psy15495 118 -----FALRTCLENGTWFQ 131 (158)
Q Consensus 118 -----~a~k~C~~nG~W~~ 131 (158)
.+.+.|..+|+|..
T Consensus 1189 y~l~G~~~~~C~~~G~Ws~ 1207 (1931)
T 2q7z_A 1189 YDLRGAASLHCTPQGDWSP 1207 (1931)
T ss_pred CEeCCCceeEEcCCCeECC
Confidence 35889999999974
No 68
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=59.35 E-value=3.6 Score=34.29 Aligned_cols=86 Identities=17% Similarity=0.242 Sum_probs=46.6
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHH--hhhceecceeeeeeeecc-
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYL--FLSCCFNGKKNGLIINLR- 117 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~--~~~~ly~gytvgys~~~~- 117 (158)
..|+++...|..-+.. ...+...+.|..+|.|..... .- ....|.......... .-..+..|-++.|.|..+
T Consensus 120 ~~Gs~v~y~C~~GY~l-~g~~~~~~tC~~~g~Ws~~~p---~C-~~~~C~~p~~~~nG~~~~~~~~~~Gs~v~y~C~~GY 194 (381)
T 3iyp_F 120 PVGTVVEYECRPGYRR-EPSLSPKLTCLQNLKWSTAVE---FC-KKKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGY 194 (381)
T ss_dssp BTTCEEEEEECTTEEE-CTTSCCEEEBCTTSCBCCCCC---SE-EECBCCCCCCCTTEEEECSSCSBTTCEEEEEECTTE
T ss_pred cCCCEEEEEcCCCccc-CCCCCceEEecCCCcCcccCc---ee-ccccCCCCCccCCCceecCCCcCcCCEEEEEeCCCc
Confidence 4578888888763221 122356899999999974211 00 012454332110000 001223456677777643
Q ss_pred ----eeEeeeCCCC---eEee
Q psy15495 118 ----FALRTCLENG---TWFQ 131 (158)
Q Consensus 118 ----~a~k~C~~nG---~W~~ 131 (158)
...+.|..+| +|..
T Consensus 195 ~L~G~~~~~C~~~G~~~~Ws~ 215 (381)
T 3iyp_F 195 KLFGSTSSFCLISGSSVQWSD 215 (381)
T ss_dssp EEESCSEEEEEEETTEEEESS
T ss_pred ccCCccceEEecCCCcceEcC
Confidence 3578999988 8964
No 69
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=55.98 E-value=13 Score=31.84 Aligned_cols=89 Identities=15% Similarity=0.185 Sum_probs=49.5
Q ss_pred cCCCCCCCceEEecCCccccccccccceeeeeCCCC---eEEecCCCCccccccccccCcchHHHHHh----hhceecce
Q psy15495 36 CWNATLAGETARTPCPNFIVGFDSRRFALRTCLENG---TWFQHPVTRKFWSNYTTCIDIEDLKVYLF----LSCCFNGK 108 (158)
Q Consensus 36 CWp~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG---~W~~~p~t~~~wtnYt~C~~~~~~~~~~~----~~~ly~gy 108 (158)
+......|.++...|.. ||.-.|...+.|..+| .|..... .-. -..|.......-..+ -..+..|-
T Consensus 77 ~~~~~~~g~~~~y~C~~---Gy~l~G~~~~~C~~~g~~~~Ws~~~p---~C~-~~~C~~p~~~~nG~~~~~~~~~~~~g~ 149 (551)
T 1ntl_A 77 VHTGIEFGSRINYTCNQ---GYRLIGSSSAVCVITDQSVDWDTEAP---ICE-WIPCEIPPGIPNGDFFSSTREDFHYGM 149 (551)
T ss_pred cCCCcccCCEEEEECCC---CCEECCCccEEEEeCCCcceeCCCCC---CCC-CCCCCCCCcCCCCcEecCCCCccccCC
Confidence 43445678888888886 3433566789999998 7864210 111 123543321100000 01122455
Q ss_pred eeeeeeecc-----------eeEeeeCCC----CeEee
Q psy15495 109 KNGLIINLR-----------FALRTCLEN----GTWFQ 131 (158)
Q Consensus 109 tvgys~~~~-----------~a~k~C~~n----G~W~~ 131 (158)
++.|.|..+ ...+.|..+ |+|..
T Consensus 150 ~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~ 187 (551)
T 1ntl_A 150 VVTYRCNTDARGKALFNLVGEPSLYCTSNDGEIGVWSG 187 (551)
T ss_pred EEEEEeCCCCCccceeEecCCcceEeeCCCCcCCEECC
Confidence 666666543 247889998 99974
No 70
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=55.81 E-value=15 Score=29.97 Aligned_cols=87 Identities=14% Similarity=0.174 Sum_probs=47.6
Q ss_pred CCCceEEecCCccccccc---cccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHH--h---hhceecceeeee
Q psy15495 41 LAGETARTPCPNFIVGFD---SRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYL--F---LSCCFNGKKNGL 112 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~---~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~--~---~~~ly~gytvgy 112 (158)
..|.+|...|-.-+.... ..+..++.|..+|+|..... .-. -..|.......-.. + -.....+-++.|
T Consensus 36 ~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~g~Ws~~~p---~C~-~~~C~~p~~~~ng~~~~~~~~~~~~~g~~v~~ 111 (403)
T 1zjk_A 36 ILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMP---ACS-IVDCGPPDDLPSGRVEYITGPGVTTYKAVIQY 111 (403)
T ss_dssp CTTCEEEEEECTTEEEEETTEECSCCEEEBCSSSSBSSCCC---EEE-ECBCCSCCCCTTEEEEESSSTTCCBTTCEEEE
T ss_pred ccCCEEEEEeCCCCEEccCCCcCCceeeEcCCCCEeCCCCC---Ccc-cccCCCCCCcCCccEEEccCCCCCccCCeEEE
Confidence 578888888876432211 13556899999999974210 111 12455332111000 0 001123556677
Q ss_pred eeecce-------eEeeeCCCCeEee
Q psy15495 113 IINLRF-------ALRTCLENGTWFQ 131 (158)
Q Consensus 113 s~~~~~-------a~k~C~~nG~W~~ 131 (158)
.|..++ ....|..+|.|..
T Consensus 112 ~C~~gyy~l~~~~~~~~C~~~g~W~~ 137 (403)
T 1zjk_A 112 SCEETFYTMKVNDGKYVCEADGFWTS 137 (403)
T ss_dssp EECTTTEEEESSCSEEEECTTSCEEE
T ss_pred eCCCchhheecCCCCEEECCCccccc
Confidence 776432 4678999999975
No 71
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=51.23 E-value=15 Score=34.07 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=29.1
Q ss_pred ccceeeeeCCCC----eEEecCCCCccccccccccCcchHHHHHh---hhceecceeeeeeeecc-----eeEeeeCCCC
Q psy15495 60 RRFALRTCLENG----TWFQHPVTRKFWSNYTTCIDIEDLKVYLF---LSCCFNGKKNGLIINLR-----FALRTCLENG 127 (158)
Q Consensus 60 ~~~a~R~C~~dG----~W~~~p~t~~~wtnYt~C~~~~~~~~~~~---~~~ly~gytvgys~~~~-----~a~k~C~~nG 127 (158)
.|...+.|..+| .|...+. .-.. .|......+...+ -..+..|-+|.|.|..+ ...+.|..+|
T Consensus 595 ~G~~~~~C~~~g~~~~~Ws~~~P---~C~~--~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~G 669 (913)
T 3t5o_A 595 MENNGQPCINDDEEMKEVDLPEI---EADS--GCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDG 669 (913)
T ss_dssp ------CCCCCCCC--------------CC--CBCCCCCCTTEEESCCCSCBCTTCEEEEEECTTEEEESCCEEEECTTS
T ss_pred cccccceEeCCCCccccCCCCCC---CCcC--cCCCCCCCCCceEecCCCceecccEEEEEeCCCCEECCCCceEECCCC
Confidence 456678899987 5753211 1111 4654421110000 01122456666777643 3589999999
Q ss_pred eEee
Q psy15495 128 TWFQ 131 (158)
Q Consensus 128 ~W~~ 131 (158)
+|-.
T Consensus 670 ~Ws~ 673 (913)
T 3t5o_A 670 TWRQ 673 (913)
T ss_dssp CEEC
T ss_pred eEcC
Confidence 9974
No 72
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=50.89 E-value=5.7 Score=33.05 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=44.8
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCC---eEEecCCCCccccccccccCcchHHHHHh---hhceecceeeeeee
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENG---TWFQHPVTRKFWSNYTTCIDIEDLKVYLF---LSCCFNGKKNGLII 114 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG---~W~~~p~t~~~wtnYt~C~~~~~~~~~~~---~~~ly~gytvgys~ 114 (158)
..|++|...|.. +|.-.|...+.|..+| +|...+ ..-.. ..|......+-..+ -..+..+-+|.|.|
T Consensus 181 ~~Gs~v~y~C~~---GY~L~G~~~~~C~~~G~~~~Ws~~~---P~C~~-v~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C 253 (381)
T 3iyp_F 181 LFGATISFSCNT---GYKLFGSTSSFCLISGSSVQWSDPL---PECRE-IYCPAPPQIDNGIIQGERDHYGYRQSVTYAC 253 (381)
T ss_dssp BTTCEEEEEECT---TEEEESCSEEEEEEETTEEEESSCC---CEEEE-CBCCCCCCCTTEEEETCCSCCBTTCEEEEEE
T ss_pred CcCCEEEEEeCC---CcccCCccceEEecCCCcceEcCCC---Ceeee-eecCCCCCCCCCeEecCCCCeecCCEEEEEe
Confidence 346666666654 3333467799999988 786421 01111 24654321100000 01122455677777
Q ss_pred ecc-----eeEeeeC---CCCeEee
Q psy15495 115 NLR-----FALRTCL---ENGTWFQ 131 (158)
Q Consensus 115 ~~~-----~a~k~C~---~nG~W~~ 131 (158)
..+ -..+.|. .+|+|..
T Consensus 254 ~~Gy~L~G~~~~~C~~~~~~G~Ws~ 278 (381)
T 3iyp_F 254 NKGFTMIGEHSIYCTVNNDEGEWSG 278 (381)
T ss_dssp CTTCEEESCSEEEEECTTSSCEESS
T ss_pred CCCCEeCCCCcEEecccCCCCEEcC
Confidence 744 3478998 4799974
No 73
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=49.78 E-value=9.4 Score=29.31 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=22.3
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
..|++|...|..- |.-.|...+.|..+|+|..
T Consensus 213 ~~g~~v~f~C~~G---y~l~G~~~~~C~~~g~Ws~ 244 (252)
T 3o8e_B 213 YYKATVMFECDKG---FYLDGSDTIVCDSNSTWDP 244 (252)
T ss_dssp CTTCEEEEEECTT---EEEESCSEEEECTTSCEES
T ss_pred ccCCEEEEEeCCC---CEEcCCCcEEECCCCeECC
Confidence 3566666666542 3335678899999999974
No 74
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=49.38 E-value=13 Score=26.48 Aligned_cols=37 Identities=14% Similarity=0.253 Sum_probs=24.7
Q ss_pred CCCCCceEEecCCccccccc------cccceeeeeCCCCeEEe
Q psy15495 39 ATLAGETARTPCPNFIVGFD------SRRFALRTCLENGTWFQ 75 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~------~~~~a~R~C~~dG~W~~ 75 (158)
....|++|...|..-+.... ..+...+.|..+|+|..
T Consensus 91 ~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~ 133 (159)
T 2qy0_A 91 VNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKN 133 (159)
T ss_dssp CCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEB
T ss_pred CcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCC
Confidence 34567888888876332111 12347899999999985
No 75
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=48.38 E-value=10 Score=25.94 Aligned_cols=79 Identities=19% Similarity=0.261 Sum_probs=46.4
Q ss_pred CCCceEEecCCccccccccccc---eeeeeCCCCeEEecCCCCccccccccccCcc--hHHHHHhh-hceecceeeeeee
Q psy15495 41 LAGETARTPCPNFIVGFDSRRF---ALRTCLENGTWFQHPVTRKFWSNYTTCIDIE--DLKVYLFL-SCCFNGKKNGLII 114 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~---a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~--~~~~~~~~-~~ly~gytvgys~ 114 (158)
..|++|...|-.- |.-.+. ..+.|..+| |...| .-. ..|.... +... ... ..+..|-+|.|.|
T Consensus 28 ~~g~~v~y~C~~G---y~l~g~~~~~~~~C~~~g-Ws~~p----~C~--~~C~~p~~~nG~~-~~~~~~y~~g~~v~~~C 96 (124)
T 2yby_A 28 SIGNKYSYKCDNG---FSPPSGYSWDYLRCTAQG-WEPEV----PCV--RKCVFHYVENGDS-AYWEKVYVQGQSLKVQC 96 (124)
T ss_dssp CTTCEEEEEECTT---EECTTCSSCEEEEEETTE-EESSS----CCE--EEEEECCCBTBCC-CSSCEEEETTCEEECCB
T ss_pred cCCCEEEEECCCC---CEeCCCCCccEEEecCCC-ccCCC----cee--eECcCCCCCCCeE-ecccCcccCCCEEEEEC
Confidence 5789999999863 433455 899999999 98521 111 3454321 1010 001 1122466666766
Q ss_pred ecc-----ee-EeeeCCCCeEee
Q psy15495 115 NLR-----FA-LRTCLENGTWFQ 131 (158)
Q Consensus 115 ~~~-----~a-~k~C~~nG~W~~ 131 (158)
..+ .. .+.|..+| |..
T Consensus 97 ~~Gy~l~G~~~~~~C~~~g-Ws~ 118 (124)
T 2yby_A 97 YNGYSLQNGQDTMTCTENG-WSP 118 (124)
T ss_dssp CTTCCCSSSSCEEEEETTE-EES
T ss_pred CCCCEecCCCCeEEcCCCC-cCC
Confidence 633 23 47899999 975
No 76
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=47.48 E-value=13 Score=37.18 Aligned_cols=86 Identities=19% Similarity=0.268 Sum_probs=48.9
Q ss_pred CCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcch---HHHHHhhhceecceeeeeeee
Q psy15495 39 ATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIED---LKVYLFLSCCFNGKKNGLIIN 115 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~---~~~~~~~~~ly~gytvgys~~ 115 (158)
....|++|...|... |.-.+.....|..+|.|...+. .-. ...|..... .....+-..+..|-+|.|+|.
T Consensus 1627 ~~~~g~~v~y~C~~g---y~l~g~~~~~C~~~G~Ws~~~P---~C~-~~~C~~~~~~i~~g~~~~~~~~~~g~~v~f~C~ 1699 (1931)
T 2q7z_A 1627 NFSPGQEVFYSCEPS---YDLRGAASLHCTPQGDWSPEAP---RCT-VKSCDDFLGQLPHGRVLLPLNLQLGAKVSFVCD 1699 (1931)
T ss_pred ccccCcEEEEECCCC---cEECCCcceEECCCCcCCCCCC---ccc-CccCCCccccccCCccccccccccCCEEEEEEC
Confidence 345688888888873 4445666899999999974211 000 113432110 000011123345667767666
Q ss_pred cc-----eeEeeeCCCC---eEee
Q psy15495 116 LR-----FALRTCLENG---TWFQ 131 (158)
Q Consensus 116 ~~-----~a~k~C~~nG---~W~~ 131 (158)
.+ ...+.|.++| +|..
T Consensus 1700 ~Gy~L~G~~~~~C~~~G~~~~Ws~ 1723 (1931)
T 2q7z_A 1700 EGFRLKGRSASHCVLAGMKALWNS 1723 (1931)
T ss_pred CCceeCCCCceEecCCCCccccCC
Confidence 43 3478899999 8974
No 77
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=45.47 E-value=14 Score=25.24 Aligned_cols=30 Identities=33% Similarity=0.717 Sum_probs=21.8
Q ss_pred CCceEEecCCccccccccccce-eeeeCCCCeEEe
Q psy15495 42 AGETARTPCPNFIVGFDSRRFA-LRTCLENGTWFQ 75 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a-~R~C~~dG~W~~ 75 (158)
.|++|...|-. +|.-.+.. .+.|..+| |..
T Consensus 88 ~g~~v~~~C~~---Gy~l~G~~~~~~C~~~g-Ws~ 118 (124)
T 2yby_A 88 QGQSLKVQCYN---GYSLQNGQDTMTCTENG-WSP 118 (124)
T ss_dssp TTCEEECCBCT---TCCCSSSSCEEEEETTE-EES
T ss_pred CCCEEEEECCC---CCEecCCCCeEEcCCCC-cCC
Confidence 48888888876 34334555 48999999 974
No 78
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=44.60 E-value=10 Score=25.96 Aligned_cols=35 Identities=14% Similarity=0.309 Sum_probs=25.7
Q ss_pred CCCCCCceEEecCCccccccccccceeeeeCCCCe---EEe
Q psy15495 38 NATLAGETARTPCPNFIVGFDSRRFALRTCLENGT---WFQ 75 (158)
Q Consensus 38 p~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~---W~~ 75 (158)
.....|++|...|..- |.-.|...+.|..+|+ |..
T Consensus 82 ~~~~~g~~v~~~C~~G---y~l~G~~~~~C~~~G~~~~Ws~ 119 (128)
T 1gkn_A 82 TDIQVGSRITYSCTTG---HRLIGHSSAECILSGNTAHWST 119 (128)
T ss_dssp SCCBTTCEEEEEECTT---EECCSCSEEEEEECSSSEEESS
T ss_pred cCCccCCEEEEEeCCC---CEEccCCceEEcCCCCcCCccC
Confidence 4456788888888763 3335678999999998 863
No 79
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=43.53 E-value=10 Score=25.96 Aligned_cols=29 Identities=24% Similarity=0.503 Sum_probs=21.2
Q ss_pred CCCceEEecCCccccccccccce---eeeeCCCCeE
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFA---LRTCLENGTW 73 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a---~R~C~~dG~W 73 (158)
..|++|...|-. +|.-.+.. .+.|. +|+|
T Consensus 90 ~~g~~v~f~C~~---Gy~l~G~~~~~~~~C~-~G~W 121 (129)
T 3r62_A 90 RTGESVEFVCKR---GYRLSSRSHTLRTTCW-DGKL 121 (129)
T ss_dssp CTTCEEEEEECT---TEEECTTSCCSEEECB-TTBC
T ss_pred cCCCEEEEEeCC---CccccCCCCcceEEeC-CCcC
Confidence 368899999976 34334444 89999 8988
No 80
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=41.98 E-value=16 Score=29.41 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=24.9
Q ss_pred CCCCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 40 TLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 40 t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
-..|.+|...|.. +|.-.|...+.|..+|+|..
T Consensus 89 ~~~g~~~~~~C~~---gy~l~G~~~~~C~~~g~Ws~ 121 (376)
T 2aty_A 89 YRHGDSVTFACKT---NFSMNGNKSVWCQANNMWGP 121 (376)
T ss_pred ccCCCEEEEECCC---CCEECCCcCeEECCCCEECC
Confidence 3467888888876 34445678999999999974
No 81
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=39.70 E-value=20 Score=29.10 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=23.1
Q ss_pred CCCceEEecCCcccccccc---ccceeeeeCCCCeEEe
Q psy15495 41 LAGETARTPCPNFIVGFDS---RRFALRTCLENGTWFQ 75 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~---~~~a~R~C~~dG~W~~ 75 (158)
..|.+|...|-.-+..... ....++.|..||+|..
T Consensus 23 ~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~ 60 (399)
T 1gpz_A 23 QFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR 60 (399)
T ss_dssp CTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSS
T ss_pred ecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccC
Confidence 4789999999763321111 1144677999999974
No 82
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=38.53 E-value=14 Score=34.22 Aligned_cols=82 Identities=28% Similarity=0.429 Sum_probs=46.0
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHhh----hceecceeeeeeeecc
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLFL----SCCFNGKKNGLIINLR 117 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~~----~~ly~gytvgys~~~~ 117 (158)
.|.+|...|.. +|.-.|...+.|..+|+|...+. .-. -..|......+- ..+ ..+.+|-+|.|.|..+
T Consensus 643 ~g~~v~y~C~~---Gy~L~G~~~~~C~~~G~Ws~~~P---~C~-~v~C~~P~~~~~-~~~~~~~~~y~~gs~v~y~C~~G 714 (913)
T 3t5o_A 643 VGEDVEISCLT---GFETVGYQYFRCLPDGTWRQGDV---ECQ-RTECIKPVVQEV-LTITPFQRLYRIGESIELTCPKG 714 (913)
T ss_dssp TTCEEEEEECT---TEEEESCCEEEECTTSCEECCSC---EEE-ECEEECCCCCSS-SBCSSCCSEEETTCEEECBCCTT
T ss_pred cccEEEEEeCC---CCEECCCCceEECCCCeEcCCCC---eec-cCcCCCCCCCCC-cEecCCCCcccCCCEEEEEeCCC
Confidence 46667777764 33335778999999999974211 000 124543322110 011 1122466677766643
Q ss_pred -----eeEeeeCCCCeEeec
Q psy15495 118 -----FALRTCLENGTWFQH 132 (158)
Q Consensus 118 -----~a~k~C~~nG~W~~~ 132 (158)
.....|..+ +|...
T Consensus 715 y~l~G~~~~~C~~~-~Ws~~ 733 (913)
T 3t5o_A 715 FVVAGPSRYTCQGN-SWTPP 733 (913)
T ss_dssp CEESSCSEEECBTT-BCSCC
T ss_pred CEECCCCceEECCC-EeeCC
Confidence 358899999 99753
No 83
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=38.43 E-value=24 Score=24.24 Aligned_cols=37 Identities=22% Similarity=0.251 Sum_probs=26.4
Q ss_pred CCCCCceEEecCCccccc---cccccceeeeeCCC----CeEEe
Q psy15495 39 ATLAGETARTPCPNFIVG---FDSRRFALRTCLEN----GTWFQ 75 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~---~~~~~~a~R~C~~d----G~W~~ 75 (158)
....|++|...|..-+.. |.-.|...+.|..+ |.|..
T Consensus 87 ~~~~g~~v~y~C~~Gy~~~~~y~l~G~~~~~C~~~~~~~G~Ws~ 130 (136)
T 1gkg_A 87 NFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSG 130 (136)
T ss_dssp CCCSSCEEEBCCCCTTSCCSSCCEESCCEEECCCSSSSSCCCSC
T ss_pred ccccCCEEEEEeCCCCCccceEEEeCCCeeEECCCCCCCCEECC
Confidence 346799999999864211 33356779999999 98864
No 84
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=38.35 E-value=16 Score=28.73 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=22.4
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
.|++|...|.. +|.-.|...+.|..+|+|..
T Consensus 253 ~g~~v~f~C~~---Gy~l~G~~~~~C~~~g~Ws~ 283 (290)
T 2xrb_A 253 LRDMVEFRCQD---GFMMKGDSSVYCRSLNRWEP 283 (290)
T ss_dssp TTCEEEEEECT---TCEEESCSEEEEETTTEEES
T ss_pred CCCEEEEEcCC---CCEECCCCCeEECCCCeECC
Confidence 46777777765 33335667899999999973
No 85
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=37.29 E-value=12 Score=26.04 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=22.1
Q ss_pred CCCceEEecCCccccccccccceeeeeCCCC---eEEe
Q psy15495 41 LAGETARTPCPNFIVGFDSRRFALRTCLENG---TWFQ 75 (158)
Q Consensus 41 ~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG---~W~~ 75 (158)
..|++|...|.. +|.-.|...+.|..+| +|..
T Consensus 84 ~~g~~v~~~C~~---Gy~L~G~~~~~C~~~G~~~~Ws~ 118 (133)
T 2a55_A 84 SFGSQIEFSCSE---GFFLIGSTTSRCEVQDRGVGWSH 118 (133)
T ss_dssp BSSCBCCCCBCT---TCBCCSCSCCBCCCCSSSCCCSC
T ss_pred cCCCEEEEEcCC---CCEEcCCCeeEecCCCCCCEeCC
Confidence 456666777764 3333567889999999 7864
No 86
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=33.83 E-value=15 Score=28.02 Aligned_cols=31 Identities=19% Similarity=0.412 Sum_probs=21.3
Q ss_pred CCceEEecCCccccccccccceeeeeCCCCeEEe
Q psy15495 42 AGETARTPCPNFIVGFDSRRFALRTCLENGTWFQ 75 (158)
Q Consensus 42 ~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~ 75 (158)
.|++|...|.. +|.-.|...+.|..+|+|..
T Consensus 207 ~g~~v~~~C~~---Gy~l~G~~~~~C~~~g~Ws~ 237 (244)
T 1rid_A 207 YNDNVDFKCKY---GYKLSGSSSSTCSPGNTWKP 237 (244)
T ss_dssp SCCCCCCBCSS---SCEEESCSCCEEETTTEEES
T ss_pred CCCEEEEEcCC---CCEECCCCCeEECCCCeECC
Confidence 45666666654 23334677899999999973
No 87
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=25.63 E-value=35 Score=25.94 Aligned_cols=86 Identities=13% Similarity=0.057 Sum_probs=45.2
Q ss_pred CCCCCceEEecCCccccccccccceeeeeCCCCeEEecCCCCccccccccccCcchHHHHHh-hhceecceeeeeeeecc
Q psy15495 39 ATLAGETARTPCPNFIVGFDSRRFALRTCLENGTWFQHPVTRKFWSNYTTCIDIEDLKVYLF-LSCCFNGKKNGLIINLR 117 (158)
Q Consensus 39 ~t~~G~~v~~~CP~~~~~~~~~~~a~R~C~~dG~W~~~p~t~~~wtnYt~C~~~~~~~~~~~-~~~ly~gytvgys~~~~ 117 (158)
.-..|++|...|..-+.. ...+...+.| .+|.|...| .- .-..|......+-..+ ...+..|-++.|.|..+
T Consensus 24 ~~~~g~~~~y~C~~Gy~~-~g~~~~~~~C-~~g~Ws~~p----~C-~~~~C~~p~~~~nG~~~~~~~~~g~~~~y~C~~G 96 (244)
T 1rid_A 24 NYNIGDTIEYLCLPGYRK-QKMGPIYAKC-TGTGWTLFN----QC-IKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSG 96 (244)
T ss_dssp CCSSCCEECCBCCTTCEE-CSSCSSSEEE-ETTEEESCC----CE-ECCCCCCCCCCSSCBCCCCCCSSCCCBCCBCCSS
T ss_pred ccCCCCEEEEEeCCCCeE-cCCCCCeEEc-CCCcCCCCC----ee-eeCCCcCCCCCCCCEEeCCCcccCCEEEEECCCC
Confidence 345799999999974322 1124478999 999997421 10 1124544321100000 02223444555555533
Q ss_pred -----eeEeeeCCC----CeEee
Q psy15495 118 -----FALRTCLEN----GTWFQ 131 (158)
Q Consensus 118 -----~a~k~C~~n----G~W~~ 131 (158)
...+.|..+ |.|..
T Consensus 97 y~l~G~~~~~C~~~~g~~g~Ws~ 119 (244)
T 1rid_A 97 YHLIGESKSYCELGSTGSMVWNP 119 (244)
T ss_dssp CEESSCSSBCBCCSSSSCCSBSS
T ss_pred CeECCCcceEEECCCCCccccCC
Confidence 246789776 68864
Done!