Query psy15502
Match_columns 99
No_of_seqs 118 out of 487
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 22:53:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15502.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15502hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nw5_A Methionine aminopeptida 99.7 8.1E-17 2.8E-21 128.5 5.5 82 15-99 190-275 (360)
2 3fm3_A Methionine aminopeptida 99.6 4.2E-16 1.4E-20 123.5 5.5 79 15-95 188-270 (358)
3 1b6a_A Methionine aminopeptida 99.5 1.5E-14 5E-19 120.0 6.1 82 16-99 310-395 (478)
4 1xgs_A Methionine aminopeptida 99.4 4.5E-14 1.5E-18 108.8 4.6 64 28-91 142-210 (295)
5 2q8k_A Proliferation-associate 99.2 1.2E-11 3.9E-16 99.4 4.7 67 27-93 183-260 (401)
6 4fuk_A Methionine aminopeptida 98.7 7.8E-09 2.7E-13 80.5 2.5 52 28-79 216-271 (337)
7 3tb5_A Methionine aminopeptida 98.6 2E-08 6.9E-13 74.6 3.1 52 29-80 158-213 (264)
8 3mx6_A Methionine aminopeptida 98.6 1.7E-08 5.7E-13 75.3 2.6 51 30-80 163-217 (262)
9 1qxy_A Methionyl aminopeptidas 98.6 1.9E-08 6.4E-13 73.9 2.3 50 31-80 160-214 (252)
10 4b6a_t Probable metalloproteas 98.5 6.6E-08 2.3E-12 83.0 4.6 71 26-96 253-390 (614)
11 1o0x_A Methionine aminopeptida 98.5 5.4E-08 1.9E-12 72.6 3.2 51 30-80 172-226 (262)
12 3tav_A Methionine aminopeptida 98.5 5.4E-08 1.8E-12 73.8 2.8 50 30-79 196-249 (286)
13 2b3h_A Methionine aminopeptida 98.5 6.1E-08 2.1E-12 76.0 3.1 49 29-77 229-281 (329)
14 2gg2_A Methionine aminopeptida 98.5 7.7E-08 2.6E-12 71.4 3.0 51 29-79 160-214 (263)
15 3s6b_A Methionine aminopeptida 98.4 1.1E-07 3.6E-12 76.5 3.2 47 29-75 260-310 (368)
16 3pka_A Methionine aminopeptida 98.4 2E-07 6.8E-12 70.8 4.0 47 30-76 196-246 (285)
17 2zsg_A Aminopeptidase P, putat 97.7 2.2E-05 7.7E-10 59.8 3.0 38 39-79 296-334 (359)
18 4b28_A Metallopeptidase, famil 97.6 2.1E-05 7.3E-10 64.2 2.9 43 39-82 397-445 (470)
19 1wy2_A XAA-Pro dipeptidase; st 97.6 2E-05 6.8E-10 61.0 2.5 40 39-81 290-330 (351)
20 4fkc_A XAA-Pro aminopeptidase; 97.6 2.6E-05 8.8E-10 60.2 2.9 39 39-80 314-353 (377)
21 1wn1_A Dipeptidase; prolidase, 97.6 2.7E-05 9.4E-10 60.3 2.6 39 39-80 293-332 (356)
22 3q6d_A Proline dipeptidase; st 97.6 3.2E-05 1.1E-09 59.2 3.0 39 39-80 293-332 (356)
23 4ege_A Dipeptidase PEPE; struc 97.4 6.2E-05 2.1E-09 59.1 3.0 38 39-79 313-351 (378)
24 3biq_A FACT complex subunit SP 97.4 8.6E-05 2.9E-09 58.9 3.5 32 39-72 371-403 (467)
25 3cb6_A FACT complex subunit SP 97.4 9.7E-05 3.3E-09 58.0 3.2 32 39-72 363-394 (444)
26 1kp0_A Creatine amidinohydrola 97.2 0.00016 5.5E-09 55.9 2.6 36 39-74 326-363 (402)
27 3rva_A Organophosphorus acid a 97.2 0.00017 5.8E-09 58.6 2.8 35 39-73 342-389 (451)
28 3ctz_A XAA-Pro aminopeptidase 97.0 0.0004 1.4E-08 58.2 3.3 44 39-82 492-538 (623)
29 3l24_A XAA-Pro dipeptidase; PI 96.9 0.00039 1.3E-08 57.9 2.9 35 39-73 339-386 (517)
30 1chm_A Creatine amidinohydrola 96.7 0.00079 2.7E-08 52.6 2.6 35 39-73 326-362 (401)
31 2iw2_A XAA-Pro dipeptidase; me 96.6 0.00097 3.3E-08 54.2 2.8 35 39-73 374-418 (494)
32 2v3z_A XAA-Pro aminopeptidase; 96.5 0.00086 2.9E-08 53.4 2.1 33 39-74 357-389 (440)
33 3ig4_A XAA-Pro aminopeptidase; 95.4 0.007 2.4E-07 48.7 2.5 28 39-72 346-373 (427)
34 1tyg_B YJBS; alpha beta barrel 45.5 13 0.00043 24.0 2.2 60 14-74 18-87 (87)
35 1ryj_A Unknown; beta/alpha pro 37.9 17 0.00058 21.7 1.8 58 17-74 5-70 (70)
36 3d4r_A Domain of unknown funct 30.7 46 0.0016 24.4 3.4 25 53-80 116-140 (169)
37 1ufg_A Lamin A, nuclear lamin; 28.5 83 0.0028 22.2 4.4 49 19-67 40-97 (151)
38 1ifr_A Lamin A/C; immunoglobul 25.2 1.1E+02 0.0037 20.6 4.4 49 19-67 9-66 (121)
39 2cu3_A Unknown function protei 24.1 38 0.0013 19.6 1.7 21 54-74 44-64 (64)
40 3jt0_A Lamin-B1; structural ge 23.6 1.2E+02 0.0039 21.2 4.4 48 19-67 28-84 (144)
41 2q3g_A PDZ and LIM domain prot 23.2 41 0.0014 19.9 1.7 48 13-65 1-51 (89)
42 2lll_A Lamin-B2; immunoglobuli 22.3 1.5E+02 0.0051 20.5 4.7 49 19-67 24-81 (139)
43 3hn9_A Lamin-B1; structural ge 22.2 1.4E+02 0.0046 20.0 4.4 48 19-67 15-71 (123)
44 2cqa_A RUVB-like 2; TIP48, TIP 20.3 35 0.0012 22.8 1.1 33 57-93 61-93 (95)
No 1
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=99.65 E-value=8.1e-17 Score=128.51 Aligned_cols=82 Identities=34% Similarity=0.528 Sum_probs=71.8
Q ss_pred eeEEEEecceeeeCCccceeeccc---c-cccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeec
Q psy15502 15 ERFSIQIAPTKLSGPKPPIFIKHS---S-RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKN 90 (99)
Q Consensus 15 ~~~~~~~~~~~~s~~~~vVrnl~G---g-y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~ 90 (99)
++|..+++++.. +++++++++| | |.+|++|+|||+..+++.+|++|||||||||+++|.|.|+++.+++||+++
T Consensus 190 ~~~G~~~~g~~~--~~~~v~~~~GHgIG~y~iHe~P~I~~~~~~~~~~Le~GmV~aIEP~i~~G~G~Vr~~~~~~~y~~~ 267 (360)
T 2nw5_A 190 SSYEVEIGGRMW--PIRPISDLHGHSISQFRIHGGISIPAVNNRDTTRIKGDSFYAVETFATTGKGSIDDRPPCSHFVLN 267 (360)
T ss_dssp TTCEEECSSSEE--ECEECTTCCEEEEBTTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEESSCSCCEECSCCCCEEEC
T ss_pred HHcCCccccccc--cccccCCeeEeeecCceeccCCEeccccCCCCcEEeCCcEEEEeceEECCcceEEeCCceeEEEEc
Confidence 556667777775 7788999998 5 599999999999888899999999999999999999999999999999999
Q ss_pred cCCCCCCCC
Q psy15502 91 FEASYIPLR 99 (99)
Q Consensus 91 ~~~~~~~~~ 99 (99)
.++.. +||
T Consensus 268 ~~~~~-~l~ 275 (360)
T 2nw5_A 268 TYKSR-KLF 275 (360)
T ss_dssp SSCCC-CCC
T ss_pred CCCCC-CCC
Confidence 77655 554
No 2
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.61 E-value=4.2e-16 Score=123.46 Aligned_cols=79 Identities=33% Similarity=0.539 Sum_probs=69.2
Q ss_pred eeEEEEecceeeeCCccceeeccc----ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeec
Q psy15502 15 ERFSIQIAPTKLSGPKPPIFIKHS----SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKN 90 (99)
Q Consensus 15 ~~~~~~~~~~~~s~~~~vVrnl~G----gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~ 90 (99)
+++..+++.+.. +++++++|.| ++.+|++|+|||+.++.+.+|++|||||||||+|+|+|+|.+...+++|+++
T Consensus 188 ~~~~~~v~~~~~--~~~~v~~~~GHgiG~~~~he~~~ip~~~~~~~~~le~GmV~tIEP~is~G~g~v~~~~~~~~~~~~ 265 (358)
T 3fm3_A 188 SSYEVEIGGRMW--PIRPISDLHGHSISQFRIHGGISIPAVNNRDTTRIKGDSFYAVETFATTGKGSIDDRPPCSHFVLN 265 (358)
T ss_dssp TTCEEECSSSEE--ECEECTTCCEEEEBTTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEESSCSCCEECSCCCCEEEC
T ss_pred hhccceeccccc--cccccccccccccCCccccCCCccCccCCCCCcEEeeeeeEEeeeeeecCCceEEECCCceEEEec
Confidence 456667777666 7889999988 4689999999999888888999999999999999999999999999999987
Q ss_pred cCCCC
Q psy15502 91 FEASY 95 (99)
Q Consensus 91 ~~~~~ 95 (99)
..+.+
T Consensus 266 ~~~~~ 270 (358)
T 3fm3_A 266 TYKSR 270 (358)
T ss_dssp SSCCC
T ss_pred cccch
Confidence 76543
No 3
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=99.50 E-value=1.5e-14 Score=119.97 Aligned_cols=82 Identities=57% Similarity=0.926 Sum_probs=68.9
Q ss_pred eEEEEecceeeeCCccceeeccc----ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeecc
Q psy15502 16 RFSIQIAPTKLSGPKPPIFIKHS----SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNF 91 (99)
Q Consensus 16 ~~~~~~~~~~~s~~~~vVrnl~G----gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~ 91 (99)
++-+.++|+.. +++++++++| |+.+|++|++||+..+.+.+|++|||||||||++.|.|.+.+..+|+||+++.
T Consensus 310 ~~G~~l~g~~~--~~~~v~h~~GHGIGGl~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~~G~G~~~ed~~~~iy~~~~ 387 (478)
T 1b6a_A 310 SYEVEIDGKTY--QVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNF 387 (478)
T ss_dssp TCEEEETTEEE--ECEECTTCEEEEEBTTBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEESSCSCCEECSCCCEEEECT
T ss_pred HcCCCcccccc--cceeecCcceeCCCCccccCCCccceecCCCCCEeCCCCEEEEeCeeECCCCEEEECCceeEEeecc
Confidence 44555666554 5678899987 58999999999998888899999999999999999999999999999999987
Q ss_pred CCCCCCCC
Q psy15502 92 EASYIPLR 99 (99)
Q Consensus 92 ~~~~~~~~ 99 (99)
+....+||
T Consensus 388 d~~~~~lk 395 (478)
T 1b6a_A 388 DVGHVPIR 395 (478)
T ss_dssp TCCCCCCC
T ss_pred cccccccc
Confidence 65555554
No 4
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=99.45 E-value=4.5e-14 Score=108.77 Aligned_cols=64 Identities=25% Similarity=0.355 Sum_probs=56.4
Q ss_pred CCccceeeccc---c-cccccCceeeeeeCCC-CeEeecCcEEEEeEeeeCCcceEEeCCceeeeeecc
Q psy15502 28 GPKPPIFIKHS---S-RSIHAGKTVPIVRGGE-GTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNF 91 (99)
Q Consensus 28 ~~~~vVrnl~G---g-y~lHegPsIPN~~~g~-~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~ 91 (99)
.++.++++++| | +.+|++|+|||+...+ +.+|++|||||||||++.|.+.|+++..++||+++.
T Consensus 142 ~G~~~~~~~~GHgIG~l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~iy~~~~ 210 (295)
T 1xgs_A 142 RGFKPIVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVR 210 (295)
T ss_dssp TTCEECTTCCEEECBTTBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEEEEEEEEEEECC
T ss_pred CCCeEECCCcCCCCCCcccCCCCcCCccCCCCCCCEeCCCCEEEEcceeECCCCEEEECCceEEEEecC
Confidence 45567788887 5 7999999999997655 889999999999999999999999999999999864
No 5
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=99.19 E-value=1.2e-11 Score=99.42 Aligned_cols=67 Identities=22% Similarity=0.250 Sum_probs=56.0
Q ss_pred eCCccceeeccc---ccccccCce--eeeeeC-----CCCeEeecCcEEEEeEeeeCCcceEEeCC-ceeeeeeccCC
Q psy15502 27 SGPKPPIFIKHS---SRSIHAGKT--VPIVRG-----GEGTLMEENEFYAIETFGSTGKGMVHDDM-DVSHYMKNFEA 93 (99)
Q Consensus 27 s~~~~vVrnl~G---gy~lHegPs--IPN~~~-----g~~~~L~eGmV~AIEPF~TtG~g~V~~~~-~~~iy~~~~~~ 93 (99)
+++++++++|+| |..+|++|. ++|+.. +.+.+|++|||||||||+++|.|.+++.. .++||+++.+.
T Consensus 183 ~~G~~~v~~~~GHGIG~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~y~~~~~~ 260 (401)
T 2q8k_A 183 SFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSK 260 (401)
T ss_dssp TTTCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCEEEECTTC
T ss_pred HcCCeecCCcccccCCCccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEECCCCceEEeecccc
Confidence 457888999998 999999995 456532 46789999999999999999999998877 88999997554
No 6
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=98.65 E-value=7.8e-09 Score=80.48 Aligned_cols=52 Identities=13% Similarity=0.021 Sum_probs=41.9
Q ss_pred CCccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceEE
Q psy15502 28 GPKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMVH 79 (99)
Q Consensus 28 ~~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V~ 79 (99)
....++++++| |..+|++|.++++.+ +.+.+|++||||||||+++.|...+.
T Consensus 216 ~g~~~~~~~~GHGIG~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~ 271 (337)
T 4fuk_A 216 YQCSVVRTYTGHGVGHLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDV 271 (337)
T ss_dssp TTCEECSSEEEEECSSSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEE
T ss_pred hcCCcccCcccCCCCCccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcce
Confidence 45567788877 999999999999954 77889999999999999998765433
No 7
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=98.59 E-value=2e-08 Score=74.59 Aligned_cols=52 Identities=19% Similarity=0.171 Sum_probs=43.8
Q ss_pred Cccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502 29 PKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMVHD 80 (99)
Q Consensus 29 ~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V~~ 80 (99)
.+.+++++.| |..+|+.|.|+++.. +++.+|++||||||||++..|.+.+..
T Consensus 158 g~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~ 213 (264)
T 3tb5_A 158 GYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKM 213 (264)
T ss_dssp TCEECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEE
T ss_pred CCceeeeceecCCCCCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEE
Confidence 4556778877 999999999999954 788999999999999999988766544
No 8
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=98.59 E-value=1.7e-08 Score=75.30 Aligned_cols=51 Identities=16% Similarity=0.174 Sum_probs=42.5
Q ss_pred ccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502 30 KPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVHD 80 (99)
Q Consensus 30 ~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~~ 80 (99)
+..++.++| |..+|+.|.|||+. .+.+.+|++||||+|||++..|.+.|+.
T Consensus 163 ~~~~~~~~GHgiG~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~g~~gvri 217 (262)
T 3mx6_A 163 YSVVRDYTGHGIGRVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTIL 217 (262)
T ss_dssp CEECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEE
T ss_pred CccCCCccccccCCcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEcCCCeEEE
Confidence 334566676 99999999999994 5788899999999999999998877654
No 9
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=98.57 E-value=1.9e-08 Score=73.95 Aligned_cols=50 Identities=26% Similarity=0.206 Sum_probs=41.9
Q ss_pred cceeeccc---ccccccCc-eeeeee-CCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502 31 PPIFIKHS---SRSIHAGK-TVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVHD 80 (99)
Q Consensus 31 ~vVrnl~G---gy~lHegP-sIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~~ 80 (99)
..+++++| |..+|+.| .|||+. .+.+..|++||||+|||++..|.+.++.
T Consensus 160 ~~~~~~~GHgiG~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~ 214 (252)
T 1qxy_A 160 KVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTE 214 (252)
T ss_dssp EECTTCCEEECSSSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEE
T ss_pred EecCCccccccCcccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEe
Confidence 34556666 99999999 999995 4678899999999999999998877654
No 10
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=98.51 E-value=6.6e-08 Score=82.96 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=53.0
Q ss_pred eeCCccceeeccc----ccccccCceeeeeeC------------------------------------------CCCeEe
Q psy15502 26 LSGPKPPIFIKHS----SRSIHAGKTVPIVRG------------------------------------------GEGTLM 59 (99)
Q Consensus 26 ~s~~~~vVrnl~G----gy~lHegPsIPN~~~------------------------------------------g~~~~L 59 (99)
-+|++++|+++.| +|.+|.++.||+... .+...+
T Consensus 253 ksY~ck~Vegl~sH~i~r~~i~g~k~Ii~~~~~kgv~~~e~hqe~~~~~~~~~k~~~~v~~~~~~~~~~~~~~~~Dd~~~ 332 (614)
T 4b6a_t 253 RSYNCGVVPGSRVRRIRRFLAGQNEGIVAEREYKGVVWTESHQEADLLSNTDAKDLTVVDRGQSTPFTNVSAIPSDDFVV 332 (614)
T ss_dssp HTTTCEECTTCEEEEEBTTBSSCSCEEESS------------------------------------CCHHHHTTSCCCBC
T ss_pred hcCCcEEecccccccccceecCCCceeccccccccccccccchhhhhhccccccccccccccccccccccccccCCceee
Confidence 3689999999998 999999999998532 134579
Q ss_pred ecCcEEEEeEeeeCCcceEEeC---------------------CceeeeeeccCCCCC
Q psy15502 60 EENEFYAIETFGSTGKGMVHDD---------------------MDVSHYMKNFEASYI 96 (99)
Q Consensus 60 ~eGmV~AIEPF~TtG~g~V~~~---------------------~~~~iy~~~~~~~~~ 96 (99)
++|+|||||+|+++|.|.+.++ ..++||+.+....+.
T Consensus 333 EeGEVYaIDi~~STG~G~~~~g~~tl~~id~~tGk~~k~~e~~~RtTiY~R~~~~~Y~ 390 (614)
T 4b6a_t 333 QSGEVYLIDLKMASLEHCTKKGLVTLETVDSYTGKSHKAGELIARPGAYVRDFAQTHI 390 (614)
T ss_dssp CTTCEEEEEEEEESSCC--------------------CCEECSCCCCEEEECTTCCCC
T ss_pred cCCcEEEEEEEeecCCCcccccccccccccccccccccccccccccceEEecCCccee
Confidence 9999999999999999876554 245789887666543
No 11
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=98.50 E-value=5.4e-08 Score=72.65 Aligned_cols=51 Identities=24% Similarity=0.208 Sum_probs=42.2
Q ss_pred ccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502 30 KPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMVHD 80 (99)
Q Consensus 30 ~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V~~ 80 (99)
+..++.++| |..+|++|.|+|+.. +.+.+|++||||+|||++..|.+.++.
T Consensus 172 ~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~ 226 (262)
T 1o0x_A 172 FNVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVV 226 (262)
T ss_dssp CEECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEE
T ss_pred CcccCCcccCcccccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCCceee
Confidence 334456666 999999999999854 678899999999999999998877663
No 12
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=98.48 E-value=5.4e-08 Score=73.81 Aligned_cols=50 Identities=22% Similarity=0.204 Sum_probs=40.9
Q ss_pred ccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcceEE
Q psy15502 30 KPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVH 79 (99)
Q Consensus 30 ~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~ 79 (99)
+.+++.+.| |..+||+|.|+|+. .+++.+|++||||+|||++..|...+.
T Consensus 196 ~~~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~~~ 249 (286)
T 3tav_A 196 FGIVDGYGGHGIGRSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQTR 249 (286)
T ss_dssp CEECTTCCEEECSSSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSCEE
T ss_pred CcccCCcccCcccccccCCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCceE
Confidence 334567777 99999999999985 477889999999999999998765443
No 13
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=98.47 E-value=6.1e-08 Score=76.02 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=40.2
Q ss_pred Cccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcce
Q psy15502 29 PKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGM 77 (99)
Q Consensus 29 ~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~ 77 (99)
++.++++++| |..+|++|.||++.. ..+..|++||||+|||+++.|...
T Consensus 229 G~~~~~~~~GHGIG~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~~~~~ 281 (329)
T 2b3h_A 229 GFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQ 281 (329)
T ss_dssp TCEECCSCCEEECSSSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCC
T ss_pred CCCccCCcccCCcCcccccCCcccccccCCCCCEECCCCEEEEeCCcCcCccc
Confidence 4455677877 899999999999854 446799999999999999976543
No 14
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=98.45 E-value=7.7e-08 Score=71.38 Aligned_cols=51 Identities=14% Similarity=0.134 Sum_probs=41.1
Q ss_pred Cccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcceEE
Q psy15502 29 PKPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVH 79 (99)
Q Consensus 29 ~~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~ 79 (99)
++..++++.| |..+|++|.++|+. .+.+.+|++||||+|||++..|.+.++
T Consensus 160 G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~ 214 (263)
T 2gg2_A 160 GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIR 214 (263)
T ss_dssp TCEECSSCCEEECSSSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEE
T ss_pred CCEECCCcccccCCcceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceE
Confidence 3344566676 99999999999984 467789999999999999998766544
No 15
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=98.41 E-value=1.1e-07 Score=76.46 Aligned_cols=47 Identities=17% Similarity=0.256 Sum_probs=39.3
Q ss_pred Cccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCc
Q psy15502 29 PKPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGK 75 (99)
Q Consensus 29 ~~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~ 75 (99)
++.+++.++| |..+|+.|.|+++. ++....|++||||+|||+++.|.
T Consensus 260 G~~~~~~~~GHGIG~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~ 310 (368)
T 3s6b_A 260 NFSVVRSYSGHGVGKLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGH 310 (368)
T ss_dssp TCEECCSCCEEECSSSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSC
T ss_pred CCCcccceeeCCCCccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCc
Confidence 4455677777 99999999999985 46677999999999999999764
No 16
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=98.39 E-value=2e-07 Score=70.79 Aligned_cols=47 Identities=17% Similarity=0.099 Sum_probs=38.6
Q ss_pred ccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcc
Q psy15502 30 KPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKG 76 (99)
Q Consensus 30 ~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g 76 (99)
+..++.++| |..+||+|.|+|+. .+++..|++||||+|||++..+..
T Consensus 196 ~~~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~ 246 (285)
T 3pka_A 196 YNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGAL 246 (285)
T ss_dssp CEECCSSCEEBCSSSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESSCS
T ss_pred CccCCCcccccCCCcccCCCcccCccCCCCCCccCCCCEEEEcCEEEcCCC
Confidence 344456666 99999999999985 467889999999999999998643
No 17
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=97.65 E-value=2.2e-05 Score=59.76 Aligned_cols=38 Identities=18% Similarity=0.222 Sum_probs=30.0
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEE
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVH 79 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~ 79 (99)
|..+|++|.|+ .+++..|++||||+|||.+. .|.+-++
T Consensus 296 Gl~~he~p~i~---~~~~~~l~~gmv~tiEPgiy~~~~~gvr 334 (359)
T 2zsg_A 296 GLEVHEGPAIS---FRNDSPLPENVVFTVEPGIYLEGKFGIR 334 (359)
T ss_dssp SSSSSEEEEES---TTCCCBCCTTBEEEECCEEEETTTEEEE
T ss_pred CcccCCCCCcC---CCCCCCcCCCCEEEECCEEEECCCcEEE
Confidence 89999988664 45678999999999999997 3544443
No 18
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=97.64 E-value=2.1e-05 Score=64.18 Aligned_cols=43 Identities=14% Similarity=0.020 Sum_probs=33.2
Q ss_pred ccccccCceeeeee----CCCCeEeecCcEEEEeEeeeC--CcceEEeCC
Q psy15502 39 SRSIHAGKTVPIVR----GGEGTLMEENEFYAIETFGST--GKGMVHDDM 82 (99)
Q Consensus 39 gy~lHegPsIPN~~----~g~~~~L~eGmV~AIEPF~Tt--G~g~V~~~~ 82 (99)
|. .||.|.|+++. .+.+..|++||||+|||++.. |.+-|+...
T Consensus 397 Gl-~HE~P~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~~~g~~GvriEd 445 (470)
T 4b28_A 397 GL-CDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISEEGGDFSIKLED 445 (470)
T ss_dssp SS-SEEEEEECCTTTCCTTSSCCBCCTTCEEEEEEEEECTTCSCEEEEEE
T ss_pred Cc-CCCCCcccCccccccCCCCCEECCCCEEEEcCeeecCCCcEEEEEee
Confidence 88 59999998853 356789999999999999984 655554433
No 19
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=97.64 E-value=2e-05 Score=60.96 Aligned_cols=40 Identities=20% Similarity=0.091 Sum_probs=31.7
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeC-CcceEEeC
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGST-GKGMVHDD 81 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt-G~g~V~~~ 81 (99)
|..+||+|.| ..+++..|++||||+|||.+.. |.+.|+..
T Consensus 290 Gl~~hE~p~i---~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriE 330 (351)
T 1wy2_A 290 GLEVHEWPRV---SQYDETVLREGMVITIEPGIYIPKIGGVRIE 330 (351)
T ss_dssp SSSSSEEEEE---STTCCCBCCTTCEEEECCEEEETTTEEEECB
T ss_pred CCCcCCCCcc---CCCCCCCcCCCCEEEECCEEEeCCCCeEEEe
Confidence 8999998765 3467789999999999999985 65555543
No 20
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=97.62 E-value=2.6e-05 Score=60.22 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=30.9
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEe
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHD 80 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~ 80 (99)
|..+||.|.+ ..+++..|++||||+|||.+. .|.+-|+.
T Consensus 314 Gl~~hE~P~i---~~~~~~~L~~Gmv~tiEPgiy~~g~~Gvri 353 (377)
T 4fkc_A 314 GIDVHEEPYI---SPGNKKILKDGMVFTIEPGIYLQGKFGVRI 353 (377)
T ss_dssp SSSSSEEEEE---CSSCCCBCCTTCEEEECCEEEETTTEEEEC
T ss_pred CCccccCCcc---cCCCCCEeCCCCEEEECCeeEECCccEEEE
Confidence 8999998865 456778999999999999987 45555543
No 21
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=97.58 E-value=2.7e-05 Score=60.27 Aligned_cols=39 Identities=15% Similarity=0.142 Sum_probs=31.0
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeC-CcceEEe
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGST-GKGMVHD 80 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt-G~g~V~~ 80 (99)
|..+||.|.++ .+++..|++||||+|||.+.. |.+-|+.
T Consensus 293 Gl~~he~p~i~---~~~~~~l~~Gmv~tiEPgiy~~g~~gvri 332 (356)
T 1wn1_A 293 GLDVHEEPYIG---PDGEVILKNGMTFTIEPGIYVPGLGGVRI 332 (356)
T ss_dssp SSSSSEEEEES---TTCCCBCCTTCEEEECCEEEETTTEEEEC
T ss_pred CCccCCCcccC---CCCCCCcCCCCEEEECCeeEeCCCcEEEE
Confidence 89999998754 467789999999999999975 5554443
No 22
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=97.58 E-value=3.2e-05 Score=59.22 Aligned_cols=39 Identities=21% Similarity=0.107 Sum_probs=30.2
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEe
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHD 80 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~ 80 (99)
|..+||+|.|+ .+++..|++||||+|||.+. .|.+-|+.
T Consensus 293 Gl~~he~p~i~---~~~~~~l~~Gmv~tiEPgiy~~g~~gvri 332 (356)
T 3q6d_A 293 GLEIHEAPGLA---FRSDTVLEPGMAVTVEPGIYIPGIGGVRI 332 (356)
T ss_dssp SSSSSEEEEES---TTCCCBCCTTCEEEECCEEEETTTEEEEC
T ss_pred CCCcCcCCCCC---CCCCCCcCCCCEEEECCEEEECCCCeEEE
Confidence 89999988654 46778999999999999987 35444433
No 23
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=97.45 E-value=6.2e-05 Score=59.07 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=30.5
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEE
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVH 79 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~ 79 (99)
|..+||.|.+. .+++..|++||||+|||.+. .|.+-|+
T Consensus 313 Gl~~hE~P~i~---~~~~~~L~~Gmv~tiEPgiy~~g~~gvr 351 (378)
T 4ege_A 313 GLCVHEEPYIV---AGNELPLVAGMAFSIEPGIYFPGRWGAR 351 (378)
T ss_dssp SSSSSEEEEEC---TTCCCBCCTTBEEEECCEEEETTTEEEE
T ss_pred CCCcCCCCccC---CCCCCccCCCCEEEECCEEEeCCccEEE
Confidence 89999998764 46778999999999999987 4554444
No 24
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=97.42 E-value=8.6e-05 Score=58.93 Aligned_cols=32 Identities=3% Similarity=-0.090 Sum_probs=27.1
Q ss_pred ccccccCceeeeeeCCC-CeEeecCcEEEEeEeee
Q psy15502 39 SRSIHAGKTVPIVRGGE-GTLMEENEFYAIETFGS 72 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~-~~~L~eGmV~AIEPF~T 72 (99)
|..+|+.|.+.+ .+. +..|++||||+|||.+.
T Consensus 371 Gl~~hE~p~~~~--~~~~~~~l~~Gmv~tiEPgiy 403 (467)
T 3biq_A 371 GLEFRDSNFILN--VKNDYRKIQRGDCFNISFGFN 403 (467)
T ss_dssp SSSSCCGGGBSS--TTCCSCCCCTTCEEEEEEEEE
T ss_pred ccccccCCccCC--CCCCCCccCCCCEEEEeCeEE
Confidence 899999997654 344 67999999999999997
No 25
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=97.36 E-value=9.7e-05 Score=58.02 Aligned_cols=32 Identities=0% Similarity=-0.076 Sum_probs=26.6
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeee
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS 72 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T 72 (99)
|..+|+.|.+. ..+.+..|++||||+|||.+.
T Consensus 363 Gl~~he~p~~~--~~~~~~~l~~Gmv~tiEPgiy 394 (444)
T 3cb6_A 363 GIEFRESSLLV--NAKNPRVLQAGMTLNLSIGFG 394 (444)
T ss_dssp SSSSCBGGGCC--STTCCCBCCTTCEEEEEEEEE
T ss_pred CccccCCcccc--CCCCCcccCCCCEEEEEeccc
Confidence 89999987433 345678999999999999996
No 26
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=97.18 E-value=0.00016 Score=55.95 Aligned_cols=36 Identities=14% Similarity=-0.024 Sum_probs=28.4
Q ss_pred ccccccCcee--eeeeCCCCeEeecCcEEEEeEeeeCC
Q psy15502 39 SRSIHAGKTV--PIVRGGEGTLMEENEFYAIETFGSTG 74 (99)
Q Consensus 39 gy~lHegPsI--PN~~~g~~~~L~eGmV~AIEPF~TtG 74 (99)
|..+|+.|.. +++..+.+..|++||||+|||++..+
T Consensus 326 G~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~ 363 (402)
T 1kp0_A 326 GVLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBP 363 (402)
T ss_dssp EEEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEEC
T ss_pred CCccccCCcccCcccCCCCCCccCCCcEEEECCceeec
Confidence 7888987753 23445677899999999999999864
No 27
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=97.18 E-value=0.00017 Score=58.60 Aligned_cols=35 Identities=11% Similarity=-0.005 Sum_probs=29.2
Q ss_pred ccccccCceeeeeeC-------------CCCeEeecCcEEEEeEeeeC
Q psy15502 39 SRSIHAGKTVPIVRG-------------GEGTLMEENEFYAIETFGST 73 (99)
Q Consensus 39 gy~lHegPsIPN~~~-------------g~~~~L~eGmV~AIEPF~Tt 73 (99)
|..+|+.|.+++... +....|++||||+|||.+.-
T Consensus 342 GldvHe~p~~~~~~~g~~~~~~~~~~~l~~~~~L~~GMV~TIEPGiY~ 389 (451)
T 3rva_A 342 GLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYF 389 (451)
T ss_dssp SSSSSCTTTTBSSTTCCBCCCCTTCTTCCCCCBCCTTCEEEECCEEEC
T ss_pred cCCcccCccccccccccccccccccccCCCCCCcCCCCEEEECCEEeE
Confidence 999999998877421 34679999999999999976
No 28
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=96.98 E-value=0.0004 Score=58.22 Aligned_cols=44 Identities=11% Similarity=-0.064 Sum_probs=31.5
Q ss_pred c--cccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEeCC
Q psy15502 39 S--RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHDDM 82 (99)
Q Consensus 39 g--y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~~~ 82 (99)
| ..+||+|.+.+...+....|++||||+|||.+. .|.+-|+...
T Consensus 492 G~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g~~GiRiEd 538 (623)
T 3ctz_A 492 GSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIEN 538 (623)
T ss_dssp CSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETTTEEEECBE
T ss_pred CCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECCceEEEEee
Confidence 7 899999974333234567899999999999887 4544444433
No 29
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=96.95 E-value=0.00039 Score=57.90 Aligned_cols=35 Identities=14% Similarity=-0.006 Sum_probs=28.4
Q ss_pred ccccccCceeeeeeC-------------CCCeEeecCcEEEEeEeeeC
Q psy15502 39 SRSIHAGKTVPIVRG-------------GEGTLMEENEFYAIETFGST 73 (99)
Q Consensus 39 gy~lHegPsIPN~~~-------------g~~~~L~eGmV~AIEPF~Tt 73 (99)
|..+|+.|.+++... +....|++||||+|||.+.-
T Consensus 339 GLdvHE~p~~~~~~~g~~~~~~~~~p~l~~~~~Le~GMV~TIEPGiY~ 386 (517)
T 3l24_A 339 GLQVHDVGGFMADEQGAHQEPPEGHPFLRCTRKIEANQVFTIEPGLYF 386 (517)
T ss_dssp SSSSSCCCCTTC---------------CCTTCBCCTTEEEEECCEEEC
T ss_pred CcccccCccccccccccccccccccccCCCCccccCCcEEEECCEEee
Confidence 999999998877421 45679999999999999976
No 30
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=96.67 E-value=0.00079 Score=52.61 Aligned_cols=35 Identities=14% Similarity=0.013 Sum_probs=26.6
Q ss_pred ccccccCcee-e-eeeCCCCeEeecCcEEEEeEeeeC
Q psy15502 39 SRSIHAGKTV-P-IVRGGEGTLMEENEFYAIETFGST 73 (99)
Q Consensus 39 gy~lHegPsI-P-N~~~g~~~~L~eGmV~AIEPF~Tt 73 (99)
|..+|+.|.. + ++..+.+..|++||||+|||++..
T Consensus 326 G~~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPgiy~ 362 (401)
T 1chm_A 326 GTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIML 362 (401)
T ss_dssp SBEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEE
T ss_pred CccCCccccccCccccCCCCCccCCCCEEEEcCeeee
Confidence 7788886532 1 234466789999999999999985
No 31
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=96.60 E-value=0.00097 Score=54.16 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=27.3
Q ss_pred cccccc---------CceeeeeeC-CCCeEeecCcEEEEeEeeeC
Q psy15502 39 SRSIHA---------GKTVPIVRG-GEGTLMEENEFYAIETFGST 73 (99)
Q Consensus 39 gy~lHe---------gPsIPN~~~-g~~~~L~eGmV~AIEPF~Tt 73 (99)
|..+|+ .|.+|++.. +....|++||||+|||-+..
T Consensus 374 Gl~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~ 418 (494)
T 2iw2_A 374 GIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYF 418 (494)
T ss_dssp SSSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEEC
T ss_pred CcccccCCCcccccccccccccccCCCCCEeCCCCEEEECCcccc
Confidence 888997 345667643 56789999999999997753
No 32
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=96.55 E-value=0.00086 Score=53.43 Aligned_cols=33 Identities=6% Similarity=0.004 Sum_probs=25.7
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCC
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTG 74 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG 74 (99)
|..+|+.|.+ ..+....|++||||+|||.+...
T Consensus 357 Gl~~he~p~~---~~~~~~~L~~Gmv~tiEPgiy~~ 389 (440)
T 2v3z_A 357 GLDVHDVGVY---GQDRSRILEPGMVLTVAPGLYIA 389 (440)
T ss_dssp SSSSSCCSCC---CGGGCCCCCTTCEEEECCEEEEC
T ss_pred CcccccCCCc---CCCCCCccCCCCEEEECCEEEeC
Confidence 7788986644 33356799999999999999854
No 33
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=95.40 E-value=0.007 Score=48.70 Aligned_cols=28 Identities=21% Similarity=0.067 Sum_probs=22.0
Q ss_pred ccccccCceeeeeeCCCCeEeecCcEEEEeEeee
Q psy15502 39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS 72 (99)
Q Consensus 39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T 72 (99)
|..+|+-|. +.+..|++||||+|||.+.
T Consensus 346 Gl~vhe~~~------~~~~~L~~GMV~tiEPgiy 373 (427)
T 3ig4_A 346 GLDTHDVGT------YKDRVLEEGMVITIEPGLY 373 (427)
T ss_dssp SSSSSCCCC------CTTCBCCTTCEEEECCEEE
T ss_pred CcCCCcCCC------CCCCEeCCCCEEEECCEEE
Confidence 556666432 5678999999999999987
No 34
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=45.53 E-value=13 Score=23.95 Aligned_cols=60 Identities=17% Similarity=0.075 Sum_probs=33.4
Q ss_pred eeeEEEEecceeeeCCc--cceeecccccccccCceee-ee-------eCCCCeEeecCcEEEEeEeeeCC
Q psy15502 14 EERFSIQIAPTKLSGPK--PPIFIKHSSRSIHAGKTVP-IV-------RGGEGTLMEENEFYAIETFGSTG 74 (99)
Q Consensus 14 ~~~~~~~~~~~~~s~~~--~vVrnl~Ggy~lHegPsIP-N~-------~~g~~~~L~eGmV~AIEPF~TtG 74 (99)
+.+-+|.+||+....+- .-|.+|.-...+=. ..|- -+ ..+....|++||.++|=|++.-|
T Consensus 18 ~~~M~I~vNGe~~el~~~~~Tv~dLL~~L~~~~-~~vaVavNg~iV~~~~~~~~~L~dGD~Vei~~~V~GG 87 (87)
T 1tyg_B 18 GGRHMLQLNGKDVKWKKDTGTIQDLLASYQLEN-KIVIVERNKEIIGKERYHEVELCDRDVIEIVHFVGGG 87 (87)
T ss_dssp ----CEEETTEEECCSSSCCBHHHHHHHTTCTT-SCCEEEETTEEECGGGTTTSBCCSSSEEEEEEECCC-
T ss_pred CcceEEEECCEEEECCCCCCcHHHHHHHhCCCC-CCEEEEECCEECChhhcCCcCCCCCCEEEEEcccccC
Confidence 34557999999887654 35566554211111 1121 11 11346789999999998886543
No 35
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=37.95 E-value=17 Score=21.74 Aligned_cols=58 Identities=9% Similarity=-0.037 Sum_probs=30.9
Q ss_pred EEEEeccee----eeCCc-cceeecccccccccCceeeeee---CCCCeEeecCcEEEEeEeeeCC
Q psy15502 17 FSIQIAPTK----LSGPK-PPIFIKHSSRSIHAGKTVPIVR---GGEGTLMEENEFYAIETFGSTG 74 (99)
Q Consensus 17 ~~~~~~~~~----~s~~~-~vVrnl~Ggy~lHegPsIPN~~---~g~~~~L~eGmV~AIEPF~TtG 74 (99)
-+|.+||+. ...+- .-+.+|.-...+.....+--++ -.....|++||.++|=|+++-|
T Consensus 5 m~i~vNg~~~~~~~~~~~~~tv~~Ll~~l~~~~~~v~vavN~~~v~~~~~L~~gD~V~ii~~V~GG 70 (70)
T 1ryj_A 5 MKFTVITDDGKKILESGAPRRIKDVLGELEIPIETVVVKKNGQIVIDEEEIFDGDIIEVIRVIYGG 70 (70)
T ss_dssp EEEEEEETTEEEEEEESSCCBHHHHHHHTTCCTTTEEEEETTEECCTTSBCCTTCEEEEEECTTCC
T ss_pred EEEEEeCccCceeEECCCCCcHHHHHHHhCCCCCCEEEEECCEECCCcccCCCCCEEEEEeccccC
Confidence 368888887 54332 2344444321121111121111 1345599999999998876543
No 36
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=30.68 E-value=46 Score=24.42 Aligned_cols=25 Identities=16% Similarity=-0.101 Sum_probs=20.1
Q ss_pred CCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502 53 GGEGTLMEENEFYAIETFGSTGKGMVHD 80 (99)
Q Consensus 53 ~g~~~~L~eGmV~AIEPF~TtG~g~V~~ 80 (99)
.+.|.++++|+.+| .++|++|.|+-
T Consensus 116 ~~~G~rV~kgd~lA---~i~T~KGEVR~ 140 (169)
T 3d4r_A 116 MDFGFRVLKGYRLA---TLESKKGDLRY 140 (169)
T ss_dssp CCCSEEECTTCEEE---EEECTTCCEEE
T ss_pred cCcCcEeccCCeEE---EEEecCceEEE
Confidence 35677899999887 78899998764
No 37
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=28.45 E-value=83 Score=22.16 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=35.0
Q ss_pred EEecceeeeCCccceeeccc------ccccc---cCceeeeeeCCCCeEeecCcEEEE
Q psy15502 19 IQIAPTKLSGPKPPIFIKHS------SRSIH---AGKTVPIVRGGEGTLMEENEFYAI 67 (99)
Q Consensus 19 ~~~~~~~~s~~~~vVrnl~G------gy~lH---egPsIPN~~~g~~~~L~eGmV~AI 67 (99)
|+|.+..+.+.+-.++|-.. |+.|- .+....-|.-..+..|++|..+.|
T Consensus 40 V~I~E~d~~GefV~L~N~s~~~~~L~GW~L~r~vdg~~~~~y~Fp~~~~L~pg~tVtI 97 (151)
T 1ufg_A 40 VAVEEVDEEGKFVRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRFPPKFTLKAGQVVTI 97 (151)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEECSSCEEEEEETTSCCEEEECCTTCEECTTCEEEE
T ss_pred EEEEEECCCCCEEEEEECCCCccccCCCEEEEecCCCccEEEEECCCcEECCCCEEEE
Confidence 67777777788888888553 66663 334344566678899999998865
No 38
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=25.20 E-value=1.1e+02 Score=20.55 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=30.0
Q ss_pred EEecceeeeCCccceeeccc------ccccc---cCceeeeeeCCCCeEeecCcEEEE
Q psy15502 19 IQIAPTKLSGPKPPIFIKHS------SRSIH---AGKTVPIVRGGEGTLMEENEFYAI 67 (99)
Q Consensus 19 ~~~~~~~~s~~~~vVrnl~G------gy~lH---egPsIPN~~~g~~~~L~eGmV~AI 67 (99)
|+|.+..+.+.+-.++|-.. |+.|- .+....-|.-..+..|++|..+.|
T Consensus 9 V~I~e~d~~g~fV~l~N~s~~~~~L~gW~l~r~v~~~~~~~y~Fp~~~~L~pg~~vtI 66 (121)
T 1ifr_A 9 VAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTI 66 (121)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEECTTCEEEEEETTSCCEEEECCSSCEECTTCEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCCccccCCCEEEEEcCCCccEEEEeCCCcEECCCCEEEE
Confidence 45555556666667777442 44433 223334556677889999998864
No 39
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=24.14 E-value=38 Score=19.63 Aligned_cols=21 Identities=5% Similarity=0.126 Sum_probs=16.1
Q ss_pred CCCeEeecCcEEEEeEeeeCC
Q psy15502 54 GEGTLMEENEFYAIETFGSTG 74 (99)
Q Consensus 54 g~~~~L~eGmV~AIEPF~TtG 74 (99)
+....|++||.++|=|+++-|
T Consensus 44 ~~~~~L~dgD~v~i~~~V~GG 64 (64)
T 2cu3_A 44 VPDRPLRDGDVVEVVALMQGG 64 (64)
T ss_dssp CCCCCCCTTCEEEEEECCCC-
T ss_pred cCCcCCCCCCEEEEEeecccC
Confidence 456789999999998887543
No 40
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=23.59 E-value=1.2e+02 Score=21.20 Aligned_cols=48 Identities=8% Similarity=0.061 Sum_probs=32.0
Q ss_pred EEecceeeeCCccceeeccc------ccccc---cCceeeeeeCCCCeEeecCcEEEE
Q psy15502 19 IQIAPTKLSGPKPPIFIKHS------SRSIH---AGKTVPIVRGGEGTLMEENEFYAI 67 (99)
Q Consensus 19 ~~~~~~~~s~~~~vVrnl~G------gy~lH---egPsIPN~~~g~~~~L~eGmV~AI 67 (99)
|.|++....|.+-.++|-.. |+.|- .+..+ .|.-..+..|++|..+.|
T Consensus 28 V~I~Evd~~GkfV~L~N~s~~~~~LgGW~L~r~v~g~~~-~y~FP~~~~L~pg~~VtV 84 (144)
T 3jt0_A 28 VCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSV-SYKYTSRYVLKAGQTVTI 84 (144)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEECTTCEEEEEETTEEE-EEECCTTCEECTTCEEEE
T ss_pred EEEEEECCCCCEEEEEECCCCceecCCcEEEEEeCCCce-EEEcCCCcEECCCCEEEE
Confidence 56666666666767777542 55553 33333 366678899999998876
No 41
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=23.24 E-value=41 Score=19.89 Aligned_cols=48 Identities=4% Similarity=0.084 Sum_probs=26.2
Q ss_pred eeeeEEEEecceeeeCCccceeecccccccccCceeeeeeCCC---CeEeecCcEE
Q psy15502 13 TEERFSIQIAPTKLSGPKPPIFIKHSSRSIHAGKTVPIVRGGE---GTLMEENEFY 65 (99)
Q Consensus 13 ~~~~~~~~~~~~~~s~~~~vVrnl~Ggy~lHegPsIPN~~~g~---~~~L~eGmV~ 65 (99)
+|+.|.|++.+. -+.++.+ .|+.....+..|-.+..+. ..-|++||++
T Consensus 1 s~~~~~v~~~~~-~~~G~~l----~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I 51 (89)
T 2q3g_A 1 SMDSFKVVLEGP-APWGFRL----QGGKDFNVPLSISRLTPGGKAAQAGVAVGDWV 51 (89)
T ss_dssp CEEEEEEEEESS-SCCCEEE----EEEGGGTEEEEEEEECTTSHHHHTTCCTTCEE
T ss_pred CccEEEEEEcCC-CcccEEE----ECcCCCCCCEEEEEECCCCHHHHcCCCCCCEE
Confidence 478899999764 3333333 3333222334566664321 1239999966
No 42
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=22.34 E-value=1.5e+02 Score=20.49 Aligned_cols=49 Identities=8% Similarity=0.066 Sum_probs=31.7
Q ss_pred EEecceeeeCCccceeeccc------cccccc---CceeeeeeCCCCeEeecCcEEEE
Q psy15502 19 IQIAPTKLSGPKPPIFIKHS------SRSIHA---GKTVPIVRGGEGTLMEENEFYAI 67 (99)
Q Consensus 19 ~~~~~~~~s~~~~vVrnl~G------gy~lHe---gPsIPN~~~g~~~~L~eGmV~AI 67 (99)
|+|.+..+.+.+-.++|-.. |+.|-- +....-|.-..+..|++|..+.|
T Consensus 24 V~I~E~d~~GefV~L~N~s~~~~~L~GW~L~r~v~g~~~~~y~Fp~~~~L~pg~~VtI 81 (139)
T 2lll_A 24 VSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTV 81 (139)
T ss_dssp EEEEEECSSCSEEEEEECSSSCEECSSCEEEEEETTSCEEEEECCTTCEECTTCEEEE
T ss_pred EEEEEECCCCCEEEEEECCCCccccCCCEEEEecCCCccEEEEECCCcEECCCCEEEE
Confidence 55666667777777777542 444442 22334456677899999998865
No 43
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=22.24 E-value=1.4e+02 Score=20.03 Aligned_cols=48 Identities=8% Similarity=0.061 Sum_probs=29.7
Q ss_pred EEecceeeeCCccceeeccc------ccccc---cCceeeeeeCCCCeEeecCcEEEE
Q psy15502 19 IQIAPTKLSGPKPPIFIKHS------SRSIH---AGKTVPIVRGGEGTLMEENEFYAI 67 (99)
Q Consensus 19 ~~~~~~~~s~~~~vVrnl~G------gy~lH---egPsIPN~~~g~~~~L~eGmV~AI 67 (99)
|+|++....|.+-.++|-.. |+.|- .+... .|.-..+..|++|..+.|
T Consensus 15 V~I~evd~~G~fV~L~N~s~~~~~L~gW~l~r~v~~~~~-~y~Fp~~~~L~pg~~vtV 71 (123)
T 3hn9_A 15 VCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSV-SYKYTSRYVLKAGQTVTI 71 (123)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEECTTCEEEEEETTEEE-EEECCTTCEECTTCEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCceecCCcEEEEEeCCCce-EEEcCCCcEECCCCEEEE
Confidence 44555555566666666442 55553 22222 366678899999998876
No 44
>2cqa_A RUVB-like 2; TIP48, TIP49B, reptin 52, ECP-51, TAP54-beta, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.40.4.14
Probab=20.30 E-value=35 Score=22.76 Aligned_cols=33 Identities=6% Similarity=0.024 Sum_probs=24.0
Q ss_pred eEeecCcEEEEeEeeeCCcceEEeCCceeeeeeccCC
Q psy15502 57 TLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEA 93 (99)
Q Consensus 57 ~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~~~ 93 (99)
.+++.|||+.||.= +|.|...+.|.-|+.+.++
T Consensus 61 ekV~~GDVI~Id~~----sG~V~klGRs~~~a~~yDl 93 (95)
T 2cqa_A 61 DKVQAGDVITIDKA----TGKISKLGRSFTRARSGPS 93 (95)
T ss_dssp TTCCTTSEEEEETT----TTEEEEEECCCCCCCCCSC
T ss_pred cCceeCCEEEEEcc----CCEEEEEEEeecccccccc
Confidence 36788999977654 8888888888666655543
Done!