BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1551
(190 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195115888|ref|XP_002002488.1| GI12473 [Drosophila mojavensis]
gi|193913063|gb|EDW11930.1| GI12473 [Drosophila mojavensis]
Length = 203
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 122/152 (80%), Gaps = 2/152 (1%)
Query: 35 EEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAP 94
EE +E + P DP KDR+N +PVE SIRYL S AY+ YGDE VW YRRNHKGM+AP
Sbjct: 46 EENSENTANAAP-DP-KDRKNVIPVETSIRYLKSAAYKTTYGDEFVWTQYRRNHKGMYAP 103
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQ 154
+KTRKTCIR G I+TGNPCPICRDEYL++ N +LL+QFISP +G++LSY KTG+CQK
Sbjct: 104 RKTRKTCIRQGRISTGNPCPICRDEYLVLDYRNTELLKQFISPYSGQVLSYSKTGLCQKS 163
Query: 155 HLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
HL+L VA+ QA++ GLIT+D+PFREY+Y +Y+
Sbjct: 164 HLRLTVAVEQARDCGLITYDVPFREYDYSEYY 195
>gi|195161757|ref|XP_002021728.1| GL26668 [Drosophila persimilis]
gi|194103528|gb|EDW25571.1| GL26668 [Drosophila persimilis]
Length = 196
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
Query: 36 EGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPK 95
+G EE K P DP KDR +PVE SIRYL S AY++ YGD+ VW YRRNHKGM+AP+
Sbjct: 43 DGEEEPKSSGP-DP-KDRTQVIPVETSIRYLKSVAYKETYGDDFVWSQYRRNHKGMYAPR 100
Query: 96 KTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQH 155
KTRKTCIR G I+TGNPCPICRDEYL++ N +LLEQFISP NGE+LSY KTG+CQK H
Sbjct: 101 KTRKTCIRQGKISTGNPCPICRDEYLVLDYRNTELLEQFISPHNGEVLSYSKTGLCQKSH 160
Query: 156 LKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
L+L VA+ QA++ GLIT+D+PFREY+Y +++
Sbjct: 161 LRLRVAVEQARDSGLITYDVPFREYDYNEFY 191
>gi|195398437|ref|XP_002057828.1| GJ17885 [Drosophila virilis]
gi|194141482|gb|EDW57901.1| GJ17885 [Drosophila virilis]
Length = 201
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 114/137 (83%)
Query: 50 AKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIAT 109
AKDR N +PVE SIRYL S AY+ YGDE VW YRRNHKGM+AP+KTRKTCIR G I+T
Sbjct: 57 AKDRTNKIPVETSIRYLKSAAYKTTYGDEFVWTQYRRNHKGMYAPRKTRKTCIRQGKIST 116
Query: 110 GNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
GNPCPICRDEYL++ N +LL+QFISP +G++LSY KTG+CQK HL+L VA+ QA++ G
Sbjct: 117 GNPCPICRDEYLVLDYRNTELLQQFISPFSGQVLSYSKTGLCQKSHLRLTVAVEQARDCG 176
Query: 170 LITFDLPFREYNYKDYF 186
LIT+D+PFREY+Y +Y+
Sbjct: 177 LITYDVPFREYDYSEYY 193
>gi|194760378|ref|XP_001962418.1| GF15452 [Drosophila ananassae]
gi|190616115|gb|EDV31639.1| GF15452 [Drosophila ananassae]
Length = 209
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 117/152 (76%)
Query: 35 EEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAP 94
E G EEN+ KDR +PVE S+RYL S AY++ YG++ VW YRRNHKGM+AP
Sbjct: 48 EAGGEENQSSSSGPDPKDRSKVIPVETSMRYLKSAAYKQTYGNDFVWTQYRRNHKGMYAP 107
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQ 154
+KTRKTCIR G I+TGNPCPICRDEYL++ N +LLEQFISP NG +LSY KTG+CQK
Sbjct: 108 RKTRKTCIRQGRISTGNPCPICRDEYLVLDYRNTELLEQFISPHNGNVLSYSKTGLCQKS 167
Query: 155 HLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
HL+L VA+ QA++ G +T+D+PFREY+Y +Y+
Sbjct: 168 HLRLTVAVQQARDSGFLTYDVPFREYDYSEYY 199
>gi|312380733|gb|EFR26649.1| hypothetical protein AND_07146 [Anopheles darlingi]
Length = 223
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 118/144 (81%)
Query: 46 PVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSG 105
P D KDR +PVE S+RYLASEAY++ Y D+PVWK+YRRNHKG + KKTRKTCIR G
Sbjct: 73 PEDDPKDRTRLIPVETSVRYLASEAYRQTYQDDPVWKHYRRNHKGAYPSKKTRKTCIRKG 132
Query: 106 IIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQA 165
I+TGNPCPICRDEYL++ NI LL+QFISP GE+LSY TG+CQK+HL+LLVA+ +A
Sbjct: 133 RISTGNPCPICRDEYLVLDHNNIDLLKQFISPQTGEVLSYRVTGLCQKKHLQLLVAVERA 192
Query: 166 KNKGLITFDLPFREYNYKDYFPTS 189
++G++TFD+PFREY+Y +Y+ T+
Sbjct: 193 MDRGMLTFDVPFREYDYSEYYTTN 216
>gi|198472887|ref|XP_002133135.1| GA29010 [Drosophila pseudoobscura pseudoobscura]
gi|198139207|gb|EDY70537.1| GA29010 [Drosophila pseudoobscura pseudoobscura]
Length = 200
Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
Query: 36 EGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPK 95
+G EE K P DP KDR +PVE SIRYL S AY++ YGD+ VW YRRNHKGM+AP+
Sbjct: 47 DGEEEPKSSGP-DP-KDRTQVIPVETSIRYLKSVAYKETYGDDFVWSQYRRNHKGMYAPR 104
Query: 96 KTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQH 155
KTRKTCIR G I+TGNPCPICRDEYL++ N +LLEQFISP NGE+LSY KTG+CQK H
Sbjct: 105 KTRKTCIRQGKISTGNPCPICRDEYLVLDYRNTELLEQFISPHNGEVLSYSKTGLCQKSH 164
Query: 156 LKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
L+L VA+ QA++ GLIT+D+PFREY+Y +++
Sbjct: 165 LRLRVAVEQARDSGLITYDVPFREYDYNEFY 195
>gi|357617278|gb|EHJ70696.1| RPS18 [Danaus plexippus]
Length = 183
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 121/151 (80%)
Query: 35 EEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAP 94
++ E + +KP+DP KDR +P+E SIRYL S+AY+K YGD+PVW YRRNHKG FAP
Sbjct: 28 DQTDESEEQQKPIDPTKDRTKIIPIETSIRYLQSDAYKKTYGDKPVWFLYRRNHKGGFAP 87
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQ 154
+KTR+TCIR+GII+TGNPCPICRDEYLI+ P N+ LLEQFIS G+IL KTG+CQK+
Sbjct: 88 RKTRRTCIRNGIISTGNPCPICRDEYLILDPKNVSLLEQFISEYTGQILEPSKTGLCQKK 147
Query: 155 HLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
H +LLVAI +A ++G IT+D+PFREY+Y Y
Sbjct: 148 HKELLVAIERAWDQGYITYDVPFREYDYSLY 178
>gi|17647685|ref|NP_523606.1| mitochondrial ribosomal protein S18B, isoform A [Drosophila
melanogaster]
gi|24585392|ref|NP_724248.1| mitochondrial ribosomal protein S18B, isoform B [Drosophila
melanogaster]
gi|7298662|gb|AAF53877.1| mitochondrial ribosomal protein S18B, isoform A [Drosophila
melanogaster]
gi|18447376|gb|AAL68253.1| LP10852p [Drosophila melanogaster]
gi|22946894|gb|AAN11068.1| mitochondrial ribosomal protein S18B, isoform B [Drosophila
melanogaster]
gi|220944418|gb|ACL84752.1| mRpS18B-PA [synthetic construct]
gi|220954374|gb|ACL89730.1| mRpS18B-PA [synthetic construct]
Length = 204
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 121/153 (79%), Gaps = 2/153 (1%)
Query: 34 EEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFA 93
E EG E+N DP KDR P+PVE SIRYL S AY++ YG++ VW YRRNHKGM+A
Sbjct: 46 EGEG-EDNASGSAPDP-KDRSKPIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYA 103
Query: 94 PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQK 153
P+KTRKTCIR I+TGNPCPICRDEYL++ N +LLEQFISP +G++LSY KTG+CQK
Sbjct: 104 PRKTRKTCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQK 163
Query: 154 QHLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
HL+L+VA+ QA++ G +T+D+PFREY+Y +Y+
Sbjct: 164 SHLRLMVAVQQARDSGYLTYDVPFREYDYSEYY 196
>gi|170033697|ref|XP_001844713.1| 28S ribosomal protein S18b, mitochondrial [Culex quinquefasciatus]
gi|167874681|gb|EDS38064.1| 28S ribosomal protein S18b, mitochondrial [Culex quinquefasciatus]
Length = 202
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 9/172 (5%)
Query: 24 RQFSLS--RICCEEEGTEEN-------KDEKPVDPAKDRRNPVPVEISIRYLASEAYQKC 74
R F++S R E+E EE+ K PVD KDR +PVE SIRYLASEAYQ+
Sbjct: 26 RSFAVSSLRASTEKEAVEEDPGAEGETKSAAPVDDPKDRTRVIPVETSIRYLASEAYQQT 85
Query: 75 YGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQF 134
Y EPVWK YRRNHKG++ PK+TRKTC+R G ++TGNPCP+CRDEYL++ N++LL+QF
Sbjct: 86 YQGEPVWKNYRRNHKGLYPPKQTRKTCVRKGKLSTGNPCPVCRDEYLVLDHQNVELLKQF 145
Query: 135 ISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
+SP G++LSY TG+CQ++ L+L VAI +A + GLITFD+PFR+Y+Y +Y+
Sbjct: 146 VSPQTGKVLSYSITGLCQRKQLELKVAIDRAMDYGLITFDVPFRDYDYAEYY 197
>gi|194879114|ref|XP_001974177.1| GG21586 [Drosophila erecta]
gi|190657364|gb|EDV54577.1| GG21586 [Drosophila erecta]
Length = 204
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 116/151 (76%)
Query: 36 EGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPK 95
EG E+ AKDR +PVE SIRYL S AY++ YG++ VW YRRNHKGM+AP+
Sbjct: 46 EGEGEDSASGSAPDAKDRSKAIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPR 105
Query: 96 KTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQH 155
KTRKTCIR I TGNPCPICRDEYL++ N +LLEQFISP +G++LSY KTG+CQK H
Sbjct: 106 KTRKTCIRQNRITTGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSH 165
Query: 156 LKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
L+L+VA+ QA++ G IT+D+PFREY+Y +Y+
Sbjct: 166 LRLMVAVQQARDSGYITYDVPFREYDYNEYY 196
>gi|158297141|ref|XP_317419.4| AGAP008043-PA [Anopheles gambiae str. PEST]
gi|157015051|gb|EAA12276.5| AGAP008043-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 118/144 (81%)
Query: 44 EKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIR 103
++PVD KDR +PVE SIRYLASEAY++ Y D+PVWK YRRNHKG + PK TRKTCIR
Sbjct: 68 KQPVDDPKDRTRVIPVETSIRYLASEAYRQTYQDDPVWKQYRRNHKGPYPPKLTRKTCIR 127
Query: 104 SGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAIT 163
G I+TGNPCPICRDEYL++ NI LL+QFISP G++LSY TG+CQK+H +LLVA+
Sbjct: 128 KGRISTGNPCPICRDEYLVLDHNNIDLLKQFISPQTGDVLSYRVTGLCQKKHTQLLVAVE 187
Query: 164 QAKNKGLITFDLPFREYNYKDYFP 187
+A ++G++TFD+PFREY+Y +Y+P
Sbjct: 188 RAMDRGMLTFDVPFREYDYSEYYP 211
>gi|195484663|ref|XP_002090784.1| GE12605 [Drosophila yakuba]
gi|194176885|gb|EDW90496.1| GE12605 [Drosophila yakuba]
Length = 204
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 90/151 (59%), Positives = 117/151 (77%)
Query: 36 EGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPK 95
EG E+ AKDR +PVE SIRYL S AY++ YG++ VW YRRNHKGM+AP+
Sbjct: 46 EGEGEDNTSSSAPDAKDRSKAIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPR 105
Query: 96 KTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQH 155
KTRKTCIR I+TGNPCPICRDEYL++ N +LLEQFISP +G++LSY KTG+CQK H
Sbjct: 106 KTRKTCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSH 165
Query: 156 LKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
L+L+VA+ QA++ G +T+D+PFREY+Y +Y+
Sbjct: 166 LRLMVAVQQARDSGYLTYDVPFREYDYNEYY 196
>gi|157125818|ref|XP_001660797.1| mitochondrial ribosomal protein, S18B, putative [Aedes aegypti]
gi|108882650|gb|EAT46875.1| AAEL002002-PA [Aedes aegypti]
Length = 208
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 122/154 (79%), Gaps = 2/154 (1%)
Query: 36 EGTEE-NKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAP 94
EG EE NK + DP KDR +PVE SIRYLASEAYQ+ Y EPVWK YRRNHKG++ P
Sbjct: 53 EGQEESNKGQVREDP-KDRTRIIPVETSIRYLASEAYQQTYQGEPVWKQYRRNHKGVYPP 111
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQ 154
K+TRKTCIR G +ATGNPCPICRDE+L++ N L++QF+S +G++LSY TG+CQK+
Sbjct: 112 KQTRKTCIRQGKLATGNPCPICRDEFLVLDHRNTDLIKQFVSSQSGKVLSYQITGLCQKR 171
Query: 155 HLKLLVAITQAKNKGLITFDLPFREYNYKDYFPT 188
HL+LLVA+ +A + GLITFD+PFR+Y+Y +Y+P
Sbjct: 172 HLELLVAVERAMDYGLITFDVPFRDYDYSEYYPA 205
>gi|195580336|ref|XP_002080006.1| GD21714 [Drosophila simulans]
gi|194192015|gb|EDX05591.1| GD21714 [Drosophila simulans]
Length = 204
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 120/153 (78%), Gaps = 2/153 (1%)
Query: 34 EEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFA 93
E EG E+N DP KDR +PVE SIRYL S AY++ YG++ VW YRRNHKGM+A
Sbjct: 46 EGEG-EDNAGGSAPDP-KDRSKAIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYA 103
Query: 94 PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQK 153
P+KTRKTCIR I+TGNPCPICRDEYL++ N +LLEQFISP +G++LSY KTG+CQK
Sbjct: 104 PRKTRKTCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQK 163
Query: 154 QHLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
HL+L+VA+ QA++ G IT+D+PFREY+Y +Y+
Sbjct: 164 SHLRLMVAVQQARDSGYITYDVPFREYDYNEYY 196
>gi|195345280|ref|XP_002039198.1| GM16961 [Drosophila sechellia]
gi|194134328|gb|EDW55844.1| GM16961 [Drosophila sechellia]
Length = 204
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 120/153 (78%), Gaps = 2/153 (1%)
Query: 34 EEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFA 93
E EG E+N DP KDR +PVE SIRYL S AY++ YG++ VW YRRNHKGM+A
Sbjct: 46 EGEG-EDNASGTAPDP-KDRSKAIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYA 103
Query: 94 PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQK 153
P+KTRKTCIR I+TGNPCPICRDEYL++ N +LLEQFISP +G++LSY KTG+CQK
Sbjct: 104 PRKTRKTCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQK 163
Query: 154 QHLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
HL+L+VA+ QA++ G +T+D+PFREY+Y +Y+
Sbjct: 164 SHLRLMVAVQQARDSGYLTYDVPFREYDYDEYY 196
>gi|195443422|ref|XP_002069416.1| GK18744 [Drosophila willistoni]
gi|194165501|gb|EDW80402.1| GK18744 [Drosophila willistoni]
Length = 210
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/147 (60%), Positives = 116/147 (78%)
Query: 40 ENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRK 99
E+ + V DR +PVE SIRYL S AY++ YGD VW YRRNHKGM+AP+KTRK
Sbjct: 54 ESSTQSSVPDVNDRTKVIPVESSIRYLKSAAYKQTYGDGFVWSQYRRNHKGMYAPRKTRK 113
Query: 100 TCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLL 159
TCIR G I+TGNPCPICRDEYL++ N +L++QFISP +GE+LSY KTG+CQK HL+LL
Sbjct: 114 TCIRQGKISTGNPCPICRDEYLVLDHRNTELIDQFISPHSGEVLSYSKTGLCQKSHLRLL 173
Query: 160 VAITQAKNKGLITFDLPFREYNYKDYF 186
VA+ +A++ GL+T+D+PFREY+Y +Y+
Sbjct: 174 VAVQRARDYGLLTYDVPFREYDYSEYY 200
>gi|195051695|ref|XP_001993152.1| GH13236 [Drosophila grimshawi]
gi|193900211|gb|EDV99077.1| GH13236 [Drosophila grimshawi]
Length = 205
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 116/152 (76%), Gaps = 1/152 (0%)
Query: 35 EEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAP 94
E E D P D KDR +PVE S+RYL S AY+ YG+E VW YRRNHKGM+AP
Sbjct: 44 ENSEESGSDASPPD-GKDRTKVIPVETSMRYLKSAAYRTTYGEEFVWTQYRRNHKGMYAP 102
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQ 154
+KTRKTC+R G I+TGNPCPICRDEYL++ N LL+QFISP +G++LSY KTG+CQK
Sbjct: 103 RKTRKTCVRQGKISTGNPCPICRDEYLVLDYRNTDLLKQFISPYSGQVLSYSKTGLCQKS 162
Query: 155 HLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
HL+L VA+ QA++ GL+T+D+PFREY+Y +Y+
Sbjct: 163 HLRLKVAVEQARDCGLLTYDVPFREYDYSEYY 194
>gi|157704353|gb|ABV68865.1| RPS18 [Trichoplusia ni]
Length = 185
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 125/171 (73%), Gaps = 5/171 (2%)
Query: 20 IPPQRQFSLS--RICC---EEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKC 74
P R+ LS R C ++ E +++KP+DP+KDR +PVE SIRY+ S+AYQ+
Sbjct: 8 FPLMRRAVLSDFRTCLRFYSDQTEETGEEQKPIDPSKDRTKIIPVETSIRYMQSKAYQQT 67
Query: 75 YGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQF 134
YG+ +W YRRNHKG FAP+KTRK+C+R+GII+TGNPCPICRDEY ++ N KLLEQF
Sbjct: 68 YGENTIWALYRRNHKGGFAPRKTRKSCVRNGIISTGNPCPICRDEYSVLDHRNTKLLEQF 127
Query: 135 ISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
IS G++L KTG+CQKQH +LLVAI +A + G +T+D+PFREY+Y Y
Sbjct: 128 ISEYTGQVLDAFKTGLCQKQHKQLLVAIERAWDHGYLTYDVPFREYDYSLY 178
>gi|156544129|ref|XP_001605882.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Nasonia
vitripennis]
Length = 208
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
Query: 35 EEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAP 94
EEG E + + K VDP DR +PVE SI YL SEAY+ YGD+PVWK+YRRN KG FAP
Sbjct: 48 EEGAEVDSEPK-VDPRSDRSKVIPVETSISYLESEAYKLAYGDDPVWKHYRRNFKGQFAP 106
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQ 154
+TRKTC+R+ +I T NPCPICRDEYL++ N KLL QFISP NGE+L KTG+C+KQ
Sbjct: 107 TRTRKTCVRNKVITTSNPCPICRDEYLVLDHRNTKLLNQFISPYNGELLQTKKTGLCRKQ 166
Query: 155 HLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
H L VAI +AK+ G I+FD+PFR Y+Y +++
Sbjct: 167 HENLEVAIYRAKDYGTISFDVPFRTYDYSEWY 198
>gi|189237400|ref|XP_001815071.1| PREDICTED: similar to AGAP008043-PA [Tribolium castaneum]
gi|270007626|gb|EFA04074.1| hypothetical protein TcasGA2_TC014308 [Tribolium castaneum]
Length = 188
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 119/178 (66%), Gaps = 5/178 (2%)
Query: 10 IPESEVWDVWIPPQRQFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASE 69
+PE+ +W F S E E ++ KDR P+PVE SIRYL S
Sbjct: 12 LPENPLWKRTFTISAAFRASETALSAEPRLEVRE-----ITKDRSKPIPVETSIRYLKSA 66
Query: 70 AYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIK 129
AY++ YGD+PVW YRRNHKG P+KTRKTCIR I+ GNPCPICRDEYL++H N++
Sbjct: 67 AYRQTYGDQPVWVLYRRNHKGAIPPRKTRKTCIRGDQISCGNPCPICRDEYLVLHENNVE 126
Query: 130 LLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYFP 187
LL+QF+ G ILSY KTG+CQK+H +LLVAI +A + GL+TFD+P R YNY +++P
Sbjct: 127 LLKQFVCEHTGSILSYSKTGLCQKKHQQLLVAIRRAVDSGLLTFDVPHRHYNYSEFYP 184
>gi|193636723|ref|XP_001949656.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Acyrthosiphon pisum]
Length = 194
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 108/144 (75%)
Query: 42 KDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTC 101
KDE D KDR +P E SI YL S+AY+ YG+ PVWK YRRNHKG P+KTRKTC
Sbjct: 47 KDEMQRDSPKDRSTVIPAETSIEYLKSDAYKSTYGNNPVWKEYRRNHKGSIPPRKTRKTC 106
Query: 102 IRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVA 161
IRS +IATGNPCPICRDEYLI+ N+ LL+QFISP +G++LSY TG+CQKQH L+VA
Sbjct: 107 IRSDMIATGNPCPICRDEYLILDYRNVDLLKQFISPYSGKLLSYKLTGICQKQHENLIVA 166
Query: 162 ITQAKNKGLITFDLPFREYNYKDY 185
+ +AK+ G I FDLP + YNY ++
Sbjct: 167 VKKAKDWGFIKFDLPIKHYNYDEF 190
>gi|307185022|gb|EFN71251.1| 28S ribosomal protein S18b, mitochondrial [Camponotus floridanus]
Length = 195
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 108/129 (83%)
Query: 57 VPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPIC 116
+PVE SI+Y++S+AY++ YG+ VWK Y+RNHKG PKKTRKTCIR G+I+TGNPCPIC
Sbjct: 65 IPVETSIKYMSSDAYKQTYGNNLVWKLYKRNHKGQIPPKKTRKTCIRHGVISTGNPCPIC 124
Query: 117 RDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
RDEYL++ N+KLLEQFI+ NG++LSY +TG+CQK+H +LLVAI++AK+ G ITFD+P
Sbjct: 125 RDEYLVLGHRNVKLLEQFINKYNGDVLSYSQTGICQKRHKQLLVAISRAKDYGTITFDVP 184
Query: 177 FREYNYKDY 185
R YNY ++
Sbjct: 185 IRHYNYSEW 193
>gi|307212292|gb|EFN88100.1| 28S ribosomal protein S18b, mitochondrial [Harpegnathos saltator]
Length = 196
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 113/154 (73%), Gaps = 5/154 (3%)
Query: 36 EGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPK 95
+ T +D +P+ R V VE SI+Y+ S+AY++ YG+ PVWK Y+RNHKG+F P
Sbjct: 46 QDTNATEDNEPIVT----RKQVSVETSIKYMTSDAYKQTYGNNPVWKLYKRNHKGLFPPT 101
Query: 96 KTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQH 155
KTRKTCIR I GNPCPICRDEYLI+ NIKLLEQFI NG +LSY KTGVCQK+H
Sbjct: 102 KTRKTCIRKDKIC-GNPCPICRDEYLILDHRNIKLLEQFIDIYNGNVLSYQKTGVCQKKH 160
Query: 156 LKLLVAITQAKNKGLITFDLPFREYNYKDYFPTS 189
+LLVA+T+AK+ G+ITFD+ R+Y+Y ++ TS
Sbjct: 161 KELLVALTKAKDYGIITFDVAIRQYDYSEWQQTS 194
>gi|321477833|gb|EFX88791.1| hypothetical protein DAPPUDRAFT_41774 [Daphnia pulex]
Length = 178
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 27 SLSRICCEEEGTEENKDEKPVD---PAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKY 83
S + ++ T N +E VD +K R +PVE S++YL S+ Y YG +PVW
Sbjct: 15 SFAETTSDKVSTNSNPEELIVDEKNASKMRNRAIPVETSMKYLKSKGYSTTYGGDPVWVR 74
Query: 84 YRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEIL 143
YRRN KG FAP+ TRKTCIR ++ATGNPCPICRDEYLI+ N++LL+QFISP NG IL
Sbjct: 75 YRRNFKGQFAPR-TRKTCIRQDMLATGNPCPICRDEYLILDYRNVELLKQFISPFNGAIL 133
Query: 144 SYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
KTG+CQ + +LLVAI +AK+ GLITFD+P REY+Y DY
Sbjct: 134 PTEKTGLCQTKQRELLVAILKAKDYGLITFDVPIREYDYSDY 175
>gi|427781489|gb|JAA56196.1| Putative mitochondrial ribosomal protein [Rhipicephalus pulchellus]
Length = 237
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 99/130 (76%)
Query: 58 PVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICR 117
P EISI YL S+AY+ YGD+PVW YRRN KG F P KTR+TCI+ G+IATG+PCPICR
Sbjct: 93 PPEISIEYLESKAYKDTYGDDPVWTMYRRNFKGQFPPPKTRRTCIKKGMIATGSPCPICR 152
Query: 118 DEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPF 177
DEYL+IH N KLL QFISP GE L KTG+C+ + L +AI +AK+ GLI++ +PF
Sbjct: 153 DEYLVIHHTNTKLLTQFISPHTGETLQPQKTGLCRDKQFLLDLAILKAKDLGLISYQVPF 212
Query: 178 REYNYKDYFP 187
R Y+YKDY+P
Sbjct: 213 RHYDYKDYYP 222
>gi|442755477|gb|JAA69898.1| Putative mitochondrial ribosomal protein s18b [Ixodes ricinus]
Length = 249
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 120/179 (67%), Gaps = 11/179 (6%)
Query: 20 IPPQRQFSLSRI-CC--EEEGTEE----NKD---EKPVDPAKDRRNPV-PVEISIRYLAS 68
IP R S S CC E E T + N D E+ +P K ++ + P E SI YL S
Sbjct: 53 IPANRYVSTSTANCCKVEPEATADSEAANGDAEVEETSEPLKRKKVTLHPPETSILYLES 112
Query: 69 EAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNI 128
+AY+ YG++PVW YRRN KG F P KTR TCIR+G I TGNPCPICRDEYL++H N+
Sbjct: 113 KAYKDTYGNDPVWTNYRRNFKGQFPPPKTRATCIRAGQIFTGNPCPICRDEYLVVHHTNV 172
Query: 129 KLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYFP 187
KLL+QFISP GEI+ +KTGVC+K+ +L + I +AK+ GL+ + +PFR YNY DY+P
Sbjct: 173 KLLQQFISPYTGEIMKPIKTGVCRKKQYELDLEILKAKDLGLLKYQVPFRHYNYGDYYP 231
>gi|328782663|ref|XP_624905.3| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Apis
mellifera]
Length = 200
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 108/146 (73%)
Query: 40 ENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRK 99
EN + + +KDR +PV+ISI+YL S AY++ YG+EP+WKYY+RN KG P KTRK
Sbjct: 53 ENDTDLSIPLSKDRSKIIPVDISIKYLKSSAYKQTYGNEPIWKYYKRNFKGHIPPIKTRK 112
Query: 100 TCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLL 159
TCIRSGIIATG+PCPICRDEYL++ N+ LL+QFIS GEIL+Y T +CQK + LL
Sbjct: 113 TCIRSGIIATGSPCPICRDEYLVLDYRNVDLLKQFISKDTGEILNYDYTSLCQKAYKDLL 172
Query: 160 VAITQAKNKGLITFDLPFREYNYKDY 185
VAI +++ GL + +PFR Y+Y ++
Sbjct: 173 VAIMKSREYGLFPYHVPFRYYDYSEW 198
>gi|391338630|ref|XP_003743660.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Metaseiulus occidentalis]
Length = 227
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 115/175 (65%), Gaps = 7/175 (4%)
Query: 18 VWIPPQRQFSLSRI--CCEEEGTEENKDEKPVDPAKDRRNPV---PVEISIRYLASEAYQ 72
+ +PP R S S + E+ E+ +D+ P D RR P PVE SIRY+ S AY+
Sbjct: 41 LGLPPTRFLSNSSVLRTAEDSKEEQTQDQNP-DGNTSRRKPYVVHPVETSIRYMKSNAYR 99
Query: 73 KCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLE 132
+ YGD+PVW YRRN KG FAP TRK+C+ +TG+PCP+CRDEYL++ N LLE
Sbjct: 100 RAYGDDPVWTLYRRNFKGQFAPP-TRKSCLHKNHHSTGSPCPVCRDEYLVVDYRNPALLE 158
Query: 133 QFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYFP 187
QFISP G+ L+ KTGVCQK KL + I +A + G + F++PFREY+Y+D++P
Sbjct: 159 QFISPYTGQTLTTKKTGVCQKVQFKLELEIMKAHDYGTLQFEVPFREYDYEDFYP 213
>gi|239789228|dbj|BAH71251.1| ACYPI003773 [Acyrthosiphon pisum]
Length = 176
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 97/129 (75%)
Query: 42 KDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTC 101
KDE D KDR +P E SI YL S+AY+ YG+ PVWK YRRNHKG P+KTRKTC
Sbjct: 47 KDEMQRDSPKDRSTVIPAETSIEYLKSDAYKSTYGNNPVWKEYRRNHKGSIPPRKTRKTC 106
Query: 102 IRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVA 161
IRS +IATGNPCPICRDEYLI+ N+ LL+QFISP +G++LSY TG+CQKQH L+VA
Sbjct: 107 IRSDMIATGNPCPICRDEYLILDYRNVDLLKQFISPYSGKLLSYKLTGICQKQHENLIVA 166
Query: 162 ITQAKNKGL 170
+ +++ G+
Sbjct: 167 VKKSQRLGI 175
>gi|332019173|gb|EGI59683.1| 28S ribosomal protein S18b, mitochondrial [Acromyrmex echinatior]
Length = 125
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 101/124 (81%)
Query: 66 LASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHP 125
+ S+AY++ YGD+PVWK YRRN KG P+KTRKTCIR+G I+TG+PCPICRDEYL++
Sbjct: 1 MNSDAYKQTYGDDPVWKKYRRNFKGQIPPRKTRKTCIRNGQISTGSPCPICRDEYLVLDH 60
Query: 126 YNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
N+KLLEQFI+ NG +LSY KT +CQ++H +LLVA+T+AK+ G ITFDL R+Y+Y ++
Sbjct: 61 RNVKLLEQFINKHNGSVLSYSKTNICQRRHKQLLVALTKAKDYGTITFDLLIRQYDYSEW 120
Query: 186 FPTS 189
P++
Sbjct: 121 NPSN 124
>gi|242011260|ref|XP_002426373.1| mitochondrial 28S ribosomal protein S18B, putative [Pediculus
humanus corporis]
gi|212510450|gb|EEB13635.1| mitochondrial 28S ribosomal protein S18B, putative [Pediculus
humanus corporis]
Length = 181
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 112/158 (70%), Gaps = 7/158 (4%)
Query: 33 CEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMF 92
C E E +EK ++P KDR + VE SI YL S+AY G++ VWK+YRRN KG
Sbjct: 25 CRTEDKESETEEKKLNP-KDRSKVISVETSIAYLKSDAY----GEDFVWKHYRRNFKGHL 79
Query: 93 APKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQ 152
P+ TRKTCIR +I+TG+PCPICRDEYL++ NI+LL+ FISP NG I KTGVCQ
Sbjct: 80 PPR-TRKTCIRKNVISTGSPCPICRDEYLVVDYQNIELLKHFISPDNGTIFESKKTGVCQ 138
Query: 153 KQHLKLLVAITQAKNKGLITFDLPFREYNYKDYFPTSV 190
QH K+ +AI +A+N GL+++++PFR+Y+Y DY+ ++
Sbjct: 139 VQHYKIKLAILKAQNYGLLSYEVPFRKYDY-DYYQDTI 175
>gi|443694905|gb|ELT95923.1| hypothetical protein CAPTEDRAFT_167201 [Capitella teleta]
Length = 203
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 99/148 (66%), Gaps = 3/148 (2%)
Query: 43 DEKPVDPAKDRRNPV---PVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRK 99
D++ A D++ VE SIRY+ S+ +++ Y D VW+ YRRNHKG F P +TR
Sbjct: 50 DDEAASKADDKKKYFTFHSVETSIRYMQSDVFKQTYRDVLVWEPYRRNHKGAFPPSQTRS 109
Query: 100 TCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLL 159
CIR ++ATGNPCPICRDEYL++ P NI+LL+QF S G +L Y KTGVCQ QH +LL
Sbjct: 110 KCIRGKVVATGNPCPICRDEYLVVDPRNIELLKQFTSSETGLLLPYQKTGVCQDQHRRLL 169
Query: 160 VAITQAKNKGLITFDLPFREYNYKDYFP 187
+A+ QA + G I LP Y+Y +Y+P
Sbjct: 170 IALEQAWDLGYIEKPLPHITYDYAEYYP 197
>gi|321451070|gb|EFX62848.1| hypothetical protein DAPPUDRAFT_67655 [Daphnia pulex]
Length = 113
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Query: 75 YGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQF 134
YG++PVW YRRN KG FAPK TRKTCIR ++TGNPCPICRDEYLI+ N+ LL QF
Sbjct: 1 YGEDPVWVRYRRNFKGQFAPK-TRKTCIRQEKLSTGNPCPICRDEYLILDCRNVVLLRQF 59
Query: 135 ISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
ISP NG IL KTG+CQ +H +L+VAI +AK+ GLI FD+P REY Y DY
Sbjct: 60 ISPFNGAILPTEKTGLCQHKHRELVVAIMKAKDYGLIKFDVPSREYEYSDY 110
>gi|241745439|ref|XP_002414261.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508115|gb|EEC17569.1| conserved hypothetical protein [Ixodes scapularis]
Length = 178
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 87/130 (66%), Gaps = 20/130 (15%)
Query: 58 PVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICR 117
P E SI YL S+AY+ YG++PVW YRRN KG F P +TR+TCIR+G I TGNPCPICR
Sbjct: 55 PPETSILYLESKAYKDTYGNDPVWTNYRRNFKGQFPPPRTRETCIRAGQIFTGNPCPICR 114
Query: 118 DEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPF 177
DEYL++H N+KLL+QFISP GE++ +KT GL+ + +PF
Sbjct: 115 DEYLVVHHTNVKLLQQFISPYTGEVMKPIKT--------------------GLLKYQVPF 154
Query: 178 REYNYKDYFP 187
R YNY+DY+P
Sbjct: 155 RHYNYEDYYP 164
>gi|410911644|ref|XP_003969300.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Takifugu
rubripes]
Length = 212
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG PVW YRRNHKG P+KTRKTCIR I GNPCPICRD ++IH
Sbjct: 46 YLTSEEYIERYGAMPVWTSYRRNHKGGIPPQKTRKTCIRGDKIC-GNPCPICRDRNIVIH 104
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFISP +G + +TGVC KQ KL AI+ A+N GL+ F +PF E++ +D
Sbjct: 105 HQNVKLLQQFISPQSGIVYDPTRTGVCMKQQKKLTEAISTARNHGLLLFHIPFVEFSGED 164
Query: 185 Y 185
Y
Sbjct: 165 Y 165
>gi|348544777|ref|XP_003459857.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Oreochromis niloticus]
Length = 246
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG PVW YRRNHKG P+KTRKTCIR I GNPCPICRD +IIH
Sbjct: 79 YLESEEYIERYGSSPVWADYRRNHKGGIPPQKTRKTCIRGDKIC-GNPCPICRDPNIIIH 137
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFISP G +L +TGVC KQ +L AI A++ GL++F +P+ E++ +D
Sbjct: 138 HQNVKLLQQFISPHTGMVLDSTRTGVCMKQQKQLNEAINTAQDHGLLSFQIPYVEFSGED 197
Query: 185 Y 185
Y
Sbjct: 198 Y 198
>gi|358253236|dbj|GAA52576.1| 28S ribosomal protein S18b mitochondrial [Clonorchis sinensis]
Length = 483
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 56 PVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPI 115
PV + S+ Y+ SE Y Y +PVW YYRRN KG F P +TR C+ S ++++ NPCPI
Sbjct: 94 PVDLSTSLDYMNSEVYLNIYQGKPVWFYYRRNFKGHFPPPRTRPNCVVSWLVSS-NPCPI 152
Query: 116 CRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDL 175
CRDEYLI+ N +LL QF++P+ EIL +TG+CQ QH KLL+ I +A++ G I L
Sbjct: 153 CRDEYLILDYRNTELLRQFLNPITLEILETSRTGLCQHQHKKLLLEIAKAQDLGTIETWL 212
Query: 176 PFREYNYKDYF 186
PF Y+Y +Y+
Sbjct: 213 PFHLYDYSEYY 223
>gi|225718324|gb|ACO15008.1| 28S ribosomal protein S18b, mitochondrial precursor [Caligus
clemensi]
Length = 177
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Query: 47 VDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGI 106
VD KDR +P EIS YL S AY + YG++ W+ YRRN G TR TC++ G
Sbjct: 31 VDDPKDRTRVIPWEISFNYLVSPAYNETYGEKRFWEPYRRNIPGPKVNTDTRPTCVKEGK 90
Query: 107 IATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAK 166
+ T +PCPICRD YL+I N +LLEQFI NGEILS TGVC+K+H +LVAI +AK
Sbjct: 91 LITNHPCPICRDIYLVIDYRNTRLLEQFIKSYNGEILSSRDTGVCRKKHFDILVAIEKAK 150
Query: 167 NKGLI-TFDLPFREYNYKDYFPT 188
GL+ + D F EY+Y Y P+
Sbjct: 151 LYGLLDSIDPHFVEYDYNFYKPS 173
>gi|209732018|gb|ACI66878.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
gi|209737816|gb|ACI69777.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
gi|303666223|gb|ADM16221.1| 28S ribosomal protein S18b, mitochondrial precursor [Salmo salar]
Length = 244
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y YG PVW YRRNHKG P+KTRKTCIR I GNPCPICRD +IIH
Sbjct: 77 YLESEEYIALYGTSPVWSDYRRNHKGGIPPQKTRKTCIRGDKIC-GNPCPICRDSNVIIH 135
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFISP G + +TGVCQKQ +L AI A++ GL+ F +P +++ +D
Sbjct: 136 YQNVKLLQQFISPNTGIVYDSTRTGVCQKQQKQLNQAIGTARDHGLLPFQVPHVDFSGED 195
Query: 185 Y 185
Y
Sbjct: 196 Y 196
>gi|225713768|gb|ACO12730.1| 28S ribosomal protein S18b, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 181
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 48 DPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGII 107
DP KDR +P E S YL S +Y YG+ W+ YRRN G A TR TC++ G +
Sbjct: 37 DP-KDRSRVIPWETSSNYLVSPSYNDTYGESRFWELYRRNVPGPKAETDTRLTCVKEGKL 95
Query: 108 ATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKN 167
T NPCPICRD YL+I N++LLEQFI NGEIL+ +TGVC+++H +LVAI +AK
Sbjct: 96 ITNNPCPICRDIYLVIDYRNVRLLEQFIKDYNGEILTSKETGVCRRKHFDILVAIEKAKL 155
Query: 168 KGLI-TFDLPFREYNYKDYFPT 188
GLI + D F EY+Y Y P+
Sbjct: 156 YGLIDSIDPHFVEYDYNYYKPS 177
>gi|290562611|gb|ADD38701.1| 28S ribosomal protein S18b, mitochondrial [Lepeophtheirus salmonis]
Length = 181
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 48 DPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGII 107
DP KDR +P E S YL S +Y YG+ W+ YRRN G A TR TC++ G +
Sbjct: 37 DP-KDRSRVIPWETSSNYLVSPSYNDTYGELRFWELYRRNVPGPKAETDTRLTCVKEGKL 95
Query: 108 ATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKN 167
T NPCPICRD YL+I N++LLEQFI NGEIL+ +TGVC+++H +LVAI +AK
Sbjct: 96 ITNNPCPICRDIYLVIDYRNVRLLEQFIKDYNGEILTSKETGVCRRKHFDILVAIEKAKL 155
Query: 168 KGLI-TFDLPFREYNYKDYFPT 188
GLI + D F EY+Y Y P+
Sbjct: 156 YGLIDSIDPHFVEYDYNYYKPS 177
>gi|225716778|gb|ACO14235.1| 28S ribosomal protein S18b, mitochondrial precursor [Esox lucius]
Length = 241
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y YG+ PVW YRRNHKG P+KTRKTCIR I GNPCPICRD +IIH
Sbjct: 74 YLESEEYIVRYGNSPVWSDYRRNHKGGIPPQKTRKTCIRGDKIC-GNPCPICRDPNIIIH 132
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFISP G + +TGVC+KQ +L AI A++ GL+ F +P ++ +D
Sbjct: 133 HQNVKLLQQFISPYTGMVYDGTRTGVCEKQQKQLNKAIGAARDHGLLAFQIPHVDFAGED 192
Query: 185 Y 185
Y
Sbjct: 193 Y 193
>gi|157364998|ref|NP_001098635.1| 28S ribosomal protein S18b, mitochondrial [Macaca mulatta]
gi|75062118|sp|Q5TM62.1|RT18B_MACMU RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|55700809|dbj|BAD69764.1| mitochondrial ribosomal protein S18B [Macaca mulatta]
gi|355748401|gb|EHH52884.1| 28S ribosomal protein S18b, mitochondrial [Macaca fascicularis]
gi|380790651|gb|AFE67201.1| 28S ribosomal protein S18b, mitochondrial [Macaca mulatta]
gi|383412697|gb|AFH29562.1| 28S ribosomal protein S18b, mitochondrial precursor [Macaca
mulatta]
Length = 258
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 93/161 (57%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKPPSEEDSLSPVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRGNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
+ TGVC KQH +L AI +A++ GL+ + +P E +D+
Sbjct: 137 SLYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDRDF 177
>gi|90074918|dbj|BAE87139.1| unnamed protein product [Macaca fascicularis]
Length = 258
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 93/161 (57%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKPPSEEDSLSPVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNH+G P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHRGGVPPQRTRKTCIRGNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
+ TGVC KQH +L AI +A++ GL+ + +P E +D+
Sbjct: 137 SLYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDRDF 177
>gi|229367504|gb|ACQ58732.1| 28S ribosomal protein S18b, mitochondrial precursor [Anoplopoma
fimbria]
gi|229367736|gb|ACQ58848.1| 28S ribosomal protein S18b, mitochondrial precursor [Anoplopoma
fimbria]
Length = 246
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
Y SE Y + YG PVW YRRNHKG P+KTRKTCIR I GNPCP+CRD +IIH
Sbjct: 78 YFESEEYIERYGTNPVWAGYRRNHKGGIPPQKTRKTCIRGDKIC-GNPCPVCRDPNVIIH 136
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFISP G + +TGVC KQ KL AI A+++G + F +P+ E++ +D
Sbjct: 137 HQNVKLLQQFISPHTGMVYDPTRTGVCMKQQKKLHEAINTARDQGFLPFQIPYVEFSGED 196
Query: 185 Y 185
Y
Sbjct: 197 Y 197
>gi|339237499|ref|XP_003380304.1| putative ribosomal protein S18 [Trichinella spiralis]
gi|316976883|gb|EFV60080.1| putative ribosomal protein S18 [Trichinella spiralis]
Length = 269
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 102/165 (61%), Gaps = 9/165 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPV-PVEISIRYLASEAYQKCYGDEPVWKY 83
Q ++ + EE GT + V+ K++ P+ P +S++Y+ SEAY++ YG+ +W
Sbjct: 50 QGKMASVNLEELGTND------VEKRKNKLRPIHPWPVSVKYMESEAYKQTYGNNLIWVL 103
Query: 84 YRRNHKG-MFAPKKTRKTCIRS-GIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGE 141
YRRN KG M +TR C+ G T PCPICRDEYL++ NIKLL+QFI P G+
Sbjct: 104 YRRNMKGPMHMLSRTRPNCVDGDGRFRTNYPCPICRDEYLVVDYRNIKLLQQFIIPQTGQ 163
Query: 142 ILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
++ K+G+C Q+LKL V I +A + G I F +PFR Y+Y +Y+
Sbjct: 164 LVESRKSGLCGHQYLKLRVEIAKATDCGYIPFTVPFRNYDYSEYY 208
>gi|402866353|ref|XP_003897350.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Papio anubis]
Length = 258
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTVCTKPPSEEDSLSPVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRK CIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKMCIRGNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
+ TGVC KQH +L AI +A++ GL+ + +P E +D+
Sbjct: 137 SLYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDRDF 177
>gi|348550483|ref|XP_003461061.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Cavia
porcellus]
Length = 259
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
QFSL C E +++ PV P ++ +YL SE YQ YG PVW Y
Sbjct: 26 QFSLQTFCTEASSGKDSLPPAPVSPYENE--------PWKYLDSEEYQSRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TR+TCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGRIPPQRTRQTCIRKNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A++ G +++ +P
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGFLSYHIP 168
>gi|355561496|gb|EHH18128.1| 28S ribosomal protein S18b, mitochondrial [Macaca mulatta]
Length = 258
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKPPSEEDSLSPVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRGNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
+ TGVC KQH +L AI +A++ GL+ + +P
Sbjct: 137 SLYTGVCVKQHKRLTQAIQKARDHGLLIYHIP 168
>gi|332245892|ref|XP_003272085.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Nomascus
leucogenys]
Length = 258
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 91/161 (56%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKAPSEEDSLSPVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRRNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH +L AI +A++ GL+ + +P E D+
Sbjct: 137 APYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDLDF 177
>gi|149754681|ref|XP_001491860.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Equus
caballus]
Length = 258
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q +C E EE+ P+ P ++ +YL SE YQ YG PVW Y
Sbjct: 26 QVPCQTLCTEAPPEEESLPPVPISPYQNE--------PWKYLDSEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKTCIRGNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH KL AI +A++ GL+++ +P E D+
Sbjct: 137 APYTGVCMKQHKKLTEAIQKARDHGLLSYHVPLVEPRDLDF 177
>gi|432883121|ref|XP_004074215.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Oryzias
latipes]
Length = 236
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 75 YGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQF 134
YG+ PVW YRRNHKG P+KTR+TCIR G GNPCP+CRD LI+HP N+KLL+QF
Sbjct: 78 YGNGPVWAGYRRNHKGGIPPQKTRRTCIR-GDKVCGNPCPVCRDSNLIVHPQNVKLLQQF 136
Query: 135 ISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
+SP G + +TGVC KQ KL AI A+++G + F +P E++ DY
Sbjct: 137 MSPHTGAVYDPTRTGVCMKQQKKLNEAINTAQDQGTLPFQIPHVEFSGDDY 187
>gi|397471675|ref|XP_003807412.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Pan paniscus]
gi|397471677|ref|XP_003807413.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Pan paniscus]
Length = 337
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 105 QVPLQTLCTKAPSEEDSLSSVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 156
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR + GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 157 RRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 215
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH +L AI +A++ GL+ + +P E D+
Sbjct: 216 APYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDLDF 256
>gi|92087050|ref|NP_001035204.1| 28S ribosomal protein S18b, mitochondrial [Pan troglodytes]
gi|115311862|sp|Q1XHY1.1|RT18B_PANTR RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|90960878|dbj|BAE92787.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|90960881|dbj|BAE92789.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410213894|gb|JAA04166.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410213896|gb|JAA04167.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410213898|gb|JAA04168.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410257758|gb|JAA16846.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410257760|gb|JAA16847.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410297836|gb|JAA27518.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410297838|gb|JAA27519.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410297840|gb|JAA27520.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410297842|gb|JAA27521.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410333761|gb|JAA35827.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
gi|410333763|gb|JAA35828.1| mitochondrial ribosomal protein S18B [Pan troglodytes]
Length = 258
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKAPSEEDSLSSVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR + GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH +L AI +A++ GL+ + +P E D+
Sbjct: 137 APYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDLDF 177
>gi|178057031|ref|NP_001116612.1| 28S ribosomal protein S18b, mitochondrial [Sus scrofa]
gi|75063858|sp|Q767K8.1|RT18B_PIG RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|41529169|dbj|BAD08429.1| mitochondrial ribosomal protein S18-2 [Sus scrofa]
gi|41529182|dbj|BAD08441.1| mitochondrial ribosomal protein S18-2 [Sus scrofa]
gi|430803893|gb|AGA83245.1| mitochondrial 28S ribosomal protein S18b [Sus scrofa]
Length = 258
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + +++ + P+ P KD +YL SE YQ YG PVW Y
Sbjct: 26 QVLLQTLCTKAPPEDDSLPQVPISPYKDE--------PWKYLDSEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRK CIR +A GNPCPICRD+ L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKMCIRGNKVA-GNPCPICRDQKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYFPT 188
TGVC KQH KL AI +A++ GL+ + +P E D+ T
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLRYHIPQVEPRDLDFSTT 180
>gi|301786981|ref|XP_002928904.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 258
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P K+ +YL SE YQ YG PVW Y
Sbjct: 26 QVPLQTLCTKGPPEEDSLPPVPITPYKNE--------PWKYLDSEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKTCIRRDKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGVIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A++ GL+++ +P
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLSYHIP 168
>gi|327266400|ref|XP_003217994.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Anolis
carolinensis]
Length = 249
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG PVW YRRNHKG P+KTRKTCIR G GNPCPICRD+ L +
Sbjct: 76 YLESEEYIERYGSNPVWFGYRRNHKGPIPPQKTRKTCIR-GKHVCGNPCPICRDQNLFLD 134
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLLEQF+ P G I + TGVC K++ +L AI Q++ GL+ F +PF ++ ++D
Sbjct: 135 YRNVKLLEQFVCPYTGIIYHPIHTGVCMKKYKQLTKAIEQSRENGLLFFSIPFMDFQHED 194
Query: 185 Y 185
+
Sbjct: 195 F 195
>gi|13529221|gb|AAH05373.1| Mitochondrial ribosomal protein S18B [Homo sapiens]
Length = 258
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKAPSEEDSLSSVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR + GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFY 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH +L AI +A++ GL+ + +P
Sbjct: 137 APYTGVCVKQHKRLTQAIQKARDHGLLIYHIP 168
>gi|395832509|ref|XP_003789310.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Otolemur
garnettii]
Length = 258
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + +++ P+ P KD +YL SE YQ YG PVW Y
Sbjct: 26 QVPLQSLCTKAPVEKDSSPPIPISPYKDE--------PWKYLESEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKTCIRRSKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH +L AI +A++ GL+++ +P
Sbjct: 137 APYTGVCMKQHKRLTQAIQKARDHGLLSYYIP 168
>gi|7662645|ref|NP_054765.1| 28S ribosomal protein S18b, mitochondrial [Homo sapiens]
gi|24212203|sp|Q9Y676.1|RT18B_HUMAN RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|7106756|gb|AAF36103.1|AF151017_1 HSPC183 [Homo sapiens]
gi|5410308|gb|AAD43025.1| PTD017 [Homo sapiens]
gi|46091141|dbj|BAD13699.1| MRPS18B protein [Homo sapiens]
gi|46091143|dbj|BAD13700.1| MRPS18B protein [Homo sapiens]
gi|52545522|emb|CAH56415.1| hypothetical protein [Homo sapiens]
gi|86197951|dbj|BAE78614.1| mitochondrial ribosomal protein S18B [Homo sapiens]
gi|119623709|gb|EAX03304.1| mitochondrial ribosomal protein S18B, isoform CRA_a [Homo sapiens]
gi|189053209|dbj|BAG34831.1| unnamed protein product [Homo sapiens]
gi|208966778|dbj|BAG73403.1| mitochondrial ribosomal protein S18B [synthetic construct]
Length = 258
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKAPSEEDSLSSVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR + GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRRNKV-VGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFY 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH +L AI +A++ GL+ + +P
Sbjct: 137 APYTGVCVKQHKRLTQAIQKARDHGLLIYHIP 168
>gi|431907055|gb|ELK11173.1| 28S ribosomal protein S18b, mitochondrial [Pteropus alecto]
Length = 257
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E + + P+ P KD +YL SE YQ YG PVW Y
Sbjct: 26 QVPLQTLCTEARLEDNSLPLFPISPYKDE--------PWKYLDSEEYQTRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L I N+KLL QF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKTCIRKNKVA-GNPCPICRDHKLHIDFRNVKLLGQFVCAHTGVIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A++ GL+++ +P
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLSYHIP 168
>gi|281337509|gb|EFB13093.1| hypothetical protein PANDA_018965 [Ailuropoda melanoleuca]
Length = 232
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
Query: 49 PAKDRRNPVPVEI----SIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRS 104
P +D PVP+ +YL SE YQ YG PVW YRRNHKG P++TRKTCIR
Sbjct: 12 PEEDSLPPVPITPYKNEPWKYLDSEEYQNRYGSRPVWADYRRNHKGGIPPQRTRKTCIRR 71
Query: 105 GIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQ 164
+A GNPCPICRD L + N+KLLEQF+ G I TGVC KQH KL AI +
Sbjct: 72 DKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQHKKLTQAIQK 130
Query: 165 AKNKGLITFDLPFREYNYKDY 185
A++ GL+++ +P E D+
Sbjct: 131 ARDHGLLSYHIPQVEPRDLDF 151
>gi|344307706|ref|XP_003422520.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Loxodonta africana]
Length = 258
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q SL +C + E++ P+ P +D +YL SE YQ YG PVW Y
Sbjct: 26 QVSLQALCTKASPVEDSLPLAPISPYEDE--------PWKYLDSEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRN+KG ++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNYKGGVPSQRTRKTCIRGNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC+KQH KL AI +A++ GL+++ +P
Sbjct: 137 APYTGVCRKQHKKLTQAIQKARDHGLLSYHIP 168
>gi|291395950|ref|XP_002714378.1| PREDICTED: mitochondrial ribosomal protein S18B [Oryctolagus
cuniculus]
Length = 253
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q +C + +++ P+ P KD +YL SE YQ YG PVW Y
Sbjct: 26 QVPFQTLCTKAPPEKDSLPTGPISPYKDE--------PWKYLDSEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR IA GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRKDKIA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A++ GL+ + +P
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLRYHIP 168
>gi|291228805|ref|XP_002734367.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Saccoglossus kowalevskii]
Length = 205
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
Query: 59 VEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRD 118
++ I+Y+ SE Y + YG +PVW YRRNHKG P KTRK CIR + + N CPICRD
Sbjct: 66 LKTGIQYMESEEYTEKYGKKPVWVGYRRNHKGHVPPMKTRKQCIRGDKMCS-NACPICRD 124
Query: 119 EYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFR 178
+ L++H N+KLL+QFI P +G+I GVCQKQ+ KL I +AK KGL+ F +
Sbjct: 125 QNLVLHFKNVKLLQQFICPHSGQIYKDTAVGVCQKQYEKLNNVIEEAKFKGLLPFTVTQV 184
Query: 179 EYNYKDYF 186
EY+Y Y+
Sbjct: 185 EYDYDQYY 192
>gi|410958640|ref|XP_003985923.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Felis catus]
Length = 258
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P K+ +YL SE YQ YG PVW Y
Sbjct: 26 QVPLQTLCTKALPEEDSLPLDPITPYKNE--------PWKYLDSEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKTCIRRDKVA-GNPCPICRDPKLHVDFRNLKLLEQFVCAHTGVIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A++ GL+ + +P
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLRYHIP 168
>gi|403308530|ref|XP_003944711.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 353
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ PV P ++ +YL SE YQ+ YG PVW Y
Sbjct: 105 QVPLQTLCTKAPSEEKSLPPVPVSPYENE--------PWKYLESEEYQERYGSRPVWADY 156
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 157 RRNHKGGVPPQRTRKTCIRRNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 215
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC +QH +L AI +A++ GL+++ +P E D+
Sbjct: 216 APYTGVCVRQHKRLTQAIQKARDLGLLSYHIPQVEPRDLDF 256
>gi|73972105|ref|XP_532057.2| PREDICTED: 28S ribosomal protein S18b, mitochondrial isoform 1
[Canis lupus familiaris]
Length = 257
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P K+ +YL SE YQ Y PVW Y
Sbjct: 26 QVPLQTLCTKGPPEEDSLPPVPISPYKNE--------PWKYLDSEEYQNRYSTRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKTCIRRDKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGVIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A++ GL+++ +P
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLSYHIP 168
>gi|126309617|ref|XP_001375521.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Monodelphis domestica]
Length = 246
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 36 EGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPK 95
+ T E + PV P +D P E YL +E Y YG PVW YRRNHKG P+
Sbjct: 35 KATPEEESSTPVSPYQD----APWE----YLETEEYISRYGSRPVWADYRRNHKGGIPPQ 86
Query: 96 KTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQH 155
+TR+TCIR G +GNPCPICRD+ L + N+KLLEQF+ G I TGVC KQH
Sbjct: 87 RTRRTCIR-GNKVSGNPCPICRDQKLHVDFRNVKLLEQFVCAHTGVIFHAPYTGVCMKQH 145
Query: 156 LKLLVAITQAKNKGLITFDLPFREYNYKDY 185
KL AI +A+++GL+++ +P + D+
Sbjct: 146 KKLTEAILKARDQGLLSYHIPLVQPRDTDF 175
>gi|256052050|ref|XP_002569592.1| hypothetical protein [Schistosoma mansoni]
gi|360042837|emb|CCD78247.1| hypothetical protein Smp_131860 [Schistosoma mansoni]
Length = 454
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 81/128 (63%)
Query: 59 VEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRD 118
+ SI Y S+ ++ Y +PVW +YRRN+KG F TRK C+ G + NPCPICRD
Sbjct: 67 LATSIEYFNSDVFRNTYKGKPVWFHYRRNYKGHFPSSVTRKNCVHFGKYVSSNPCPICRD 126
Query: 119 EYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFR 178
EYL++ +I+LL+QFI+P EI KTG+C+ Q+ L + + +A + GLI LPF
Sbjct: 127 EYLVLSHRHIELLKQFINPDTLEIFPLSKTGICRHQYKILQLEVEKASDLGLIQTWLPFY 186
Query: 179 EYNYKDYF 186
YNY DY+
Sbjct: 187 LYNYHDYY 194
>gi|426250634|ref|XP_004019040.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Ovis aries]
Length = 258
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + +++ PV P +D +YL SE Y YG PVW Y
Sbjct: 26 QVPLQTLCTKAPPEDDSLPPIPVSPYEDE--------PWKYLDSEEYHNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRK CIR +A GNPCPICRD+ L + N+KLL+QF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKMCIRGNKVA-GNPCPICRDQKLHVDFRNVKLLKQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH KL AI +A++ GL+++ +P E D+
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLSYHIPQVEPRDLDF 177
>gi|296474243|tpg|DAA16358.1| TPA: 28S ribosomal protein S18b, mitochondrial [Bos taurus]
gi|440896157|gb|ELR48168.1| 28S ribosomal protein S18b, mitochondrial [Bos grunniens mutus]
Length = 258
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + +++ PV P +D +YL SE Y YG PVW Y
Sbjct: 26 QVPLQTLCTKAPPEDDSLPPIPVSPYEDE--------PWKYLDSEEYHNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRK CIR +A GNPCPICRD+ L + N+KLL+QF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKMCIRGNKVA-GNPCPICRDQKLHVDFRNVKLLKQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A++ GL+++ +P
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLSYHIP 168
>gi|23956152|ref|NP_080154.1| 28S ribosomal protein S18b, mitochondrial [Mus musculus]
gi|24212195|sp|Q99N84.1|RT18B_MOUSE RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2; Flags: Precursor
gi|13620909|dbj|BAB41007.1| mitochondrial ribosomal protein S18b [Mus musculus]
gi|18256035|gb|AAH21752.1| Mitochondrial ribosomal protein S18B [Mus musculus]
gi|74151554|dbj|BAE38883.1| unnamed protein product [Mus musculus]
gi|148691310|gb|EDL23257.1| mitochondrial ribosomal protein S18B, isoform CRA_d [Mus musculus]
Length = 254
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P + +YL SE Y YG PVW Y
Sbjct: 24 QVPLQTLCTRGPPEEDAPSSLPVSPYESE--------PWKYLDSEEYHNRYGSRPVWADY 75
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR+ +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 76 RRNHKGGVPPQRTRKTCIRNNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 134
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH KL AI +A+ GL+++ +P E D+
Sbjct: 135 APYTGVCMKQHKKLTQAIQKARECGLLSYYVPQVEPRDADF 175
>gi|296197608|ref|XP_002746355.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Callithrix
jacchus]
Length = 258
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P ++ +YL SE YQ+ YG P+W Y
Sbjct: 26 QVPLQTLCTKALSEEKSLPPVPISPYENE--------PWKYLESEEYQERYGSCPIWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRGNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC +QH +L AI +A++ GL+++ +P E D+
Sbjct: 137 APYTGVCMRQHKRLTQAIQKARDLGLLSYHIPQVEPRDLDF 177
>gi|46237662|emb|CAE84037.1| mitochondrial ribosomal protein S18B [Rattus norvegicus]
gi|187469104|gb|AAI66875.1| Mitochondrial ribosomal protein S18B [Rattus norvegicus]
Length = 253
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 33 CEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMF 92
C E+ PV P ++ +YL SE YQ YG PVW YRRNHKG
Sbjct: 31 CTRSPPEDASSSLPVSPFENE--------PWKYLDSEEYQNRYGSRPVWADYRRNHKGGV 82
Query: 93 APKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQ 152
P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I TGVC
Sbjct: 83 PPQRTRKTCIRKDKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCM 141
Query: 153 KQHLKLLVAITQAKNKGLITFDLP 176
KQH KL AI +A+ GL+++ +P
Sbjct: 142 KQHKKLTQAIQKAREYGLLSYYVP 165
>gi|261399864|ref|NP_997699.2| mitochondrial ribosomal protein S18B [Rattus norvegicus]
gi|149031788|gb|EDL86723.1| mitochondrial ribosomal protein S18B, isoform CRA_a [Rattus
norvegicus]
Length = 257
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Query: 33 CEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMF 92
C E+ PV P ++ +YL SE YQ YG PVW YRRNHKG
Sbjct: 35 CTRSPPEDASSSLPVSPFENE--------PWKYLDSEEYQNRYGSRPVWADYRRNHKGGV 86
Query: 93 APKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQ 152
P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G I TGVC
Sbjct: 87 PPQRTRKTCIRKDKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCM 145
Query: 153 KQHLKLLVAITQAKNKGLITFDLP 176
KQH KL AI +A+ GL+++ +P
Sbjct: 146 KQHKKLTQAIQKAREYGLLSYYVP 169
>gi|397524898|ref|XP_003832418.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Pan
paniscus]
Length = 258
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKAPSEEDSLSSVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
R HKG P++TRKTCIR + GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 78 RCKHKGGVPPQRTRKTCIRRNKVV-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH +L AI +A++ GL+ + +P E D+
Sbjct: 137 APYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDLDF 177
>gi|47204267|emb|CAG13732.1| unnamed protein product [Tetraodon nigroviridis]
Length = 242
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 80/123 (65%), Gaps = 4/123 (3%)
Query: 65 YLASEAYQKCYGDEP--VWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLI 122
YL+SE G EP + YRRNHKG P+KTRKTC R I GNPCPICRD ++
Sbjct: 71 YLSSEG-TTLSGTEPSPCGRDYRRNHKGAIPPQKTRKTCTRGDKIC-GNPCPICRDRNIV 128
Query: 123 IHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNY 182
+H N+KLL+QFISP G +L +TGVC KQ KLL AI A+N GL+ +PF +++
Sbjct: 129 VHHQNVKLLQQFISPHTGLVLDPTRTGVCMKQQKKLLEAIVTAQNHGLLLVHVPFVDFSE 188
Query: 183 KDY 185
+DY
Sbjct: 189 EDY 191
>gi|354487566|ref|XP_003505943.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Cricetulus griseus]
Length = 254
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 87/156 (55%), Gaps = 12/156 (7%)
Query: 22 PQRQFSLSRICCEEEGTEENK-DEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPV 80
P Q L +C + G EE P+ P ++ +YL SE YQ YG PV
Sbjct: 21 PGAQVPLRALCTK--GPEEGSLSSLPISPYENE--------PWKYLDSEEYQNRYGSRPV 70
Query: 81 WKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNG 140
W YRRNHKG P++TRKTCIR +A GNPCPICRD L + N+KLLEQF+ G
Sbjct: 71 WADYRRNHKGGIPPQRTRKTCIRKNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTG 129
Query: 141 EILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
I TGVC KQH KL AI +A+ GL+ + +P
Sbjct: 130 IIFHAPYTGVCMKQHKKLTQAIQKAREYGLLRYYVP 165
>gi|74188911|dbj|BAE39228.1| unnamed protein product [Mus musculus]
Length = 254
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P + +YL SE Y YG PVW +
Sbjct: 24 QVPLQTLCTRGPPEEDAPSSLPVSPYESE--------PWKYLDSEEYHNRYGSRPVWADF 75
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR+ +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 76 RRNHKGGVPPQRTRKTCIRNNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 134
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH KL AI +A+ GL+++ +P E D+
Sbjct: 135 APYTGVCMKQHKKLTQAIQKARECGLLSYYVPQVEPRDADF 175
>gi|395533789|ref|XP_003768935.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Sarcophilus
harrisii]
Length = 253
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 15/167 (8%)
Query: 19 WIPPQRQFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDE 78
W+ Q +++ EEEG+ PV P ++ P E YL +E Y YG
Sbjct: 24 WVQITHQALCTKVSPEEEGS------IPVSPYQN----APWE----YLETEEYLTRYGSR 69
Query: 79 PVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPV 138
PVW Y+RNHKG P++TRKTCIR +A GNPCPICRD+ L + N+KLLEQFI
Sbjct: 70 PVWADYQRNHKGGIPPQRTRKTCIRGNKVA-GNPCPICRDQKLHVDFRNVKLLEQFICAQ 128
Query: 139 NGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
G I TG+C KQH K+ AI +A++ G +++ +P + D+
Sbjct: 129 TGVIFHAPYTGICMKQHKKVTEAILKARDHGFLSYHIPLAQPRDTDF 175
>gi|148691308|gb|EDL23255.1| mitochondrial ribosomal protein S18B, isoform CRA_b [Mus musculus]
Length = 204
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P + +YL SE Y YG PVW Y
Sbjct: 24 QVPLQTLCTRGPPEEDAPSSLPVSPYESE--------PWKYLDSEEYHNRYGSRPVWADY 75
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR+ +A GNPCPICRD L + N+KLLEQF+ G I
Sbjct: 76 RRNHKGGVPPQRTRKTCIRNNKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 134
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH KL AI +A+ GL+++ +P E D+
Sbjct: 135 APYTGVCMKQHKKLTQAIQKARECGLLSYYVPQVEPRDADF 175
>gi|301620284|ref|XP_002939508.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 222
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
Y+ SE Y + YG + VW YRRNHKG P+KTRKTC+R G GNPCPICRD+ L ++
Sbjct: 53 YMNSEEYLQQYGQKSVWADYRRNHKGPIPPQKTRKTCVRGGKTC-GNPCPICRDQKLGLN 111
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFI P G + KTGVC KQ L+ AIT+A + GL+ +P+ ++D
Sbjct: 112 YRNVKLLQQFICPHTGTVYDPTKTGVCMKQQKALVKAITEATDHGLLPAHVPYIVLPHED 171
Query: 185 YF 186
Y
Sbjct: 172 YL 173
>gi|108935897|sp|P82918.2|RT18B_BOVIN RecName: Full=28S ribosomal protein S18b, mitochondrial;
Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName:
Full=28S ribosomal protein S18-2, mitochondrial;
Short=MRP-S18-2
Length = 258
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + +++ PV P +D +YL SE Y G PVW Y
Sbjct: 26 QVPLQTLCTKAPPEDDSLPPIPVSPYEDE--------PWKYLDSEEYHNRNGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRK CIR +A GNPCPICRD+ L + N+KLL+QF+ G I
Sbjct: 78 RRNHKGGIPPQRTRKMCIRGNKVA-GNPCPICRDQKLHVDFRNVKLLKQFVCAHTGIIFH 136
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH KL AI +A++ GL+++ +P E D+
Sbjct: 137 APYTGVCMKQHKKLTQAIQKARDHGLLSYHIPQVEPRDLDF 177
>gi|147898931|ref|NP_001089678.1| mitochondrial ribosomal protein S18B [Xenopus laevis]
gi|76780299|gb|AAI06215.1| MGC130639 protein [Xenopus laevis]
Length = 222
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG + +W YRRNHKG P+KTRKTCIR G + GNPCPICRDE L +H
Sbjct: 53 YLNSEEYLQRYGQKSIWADYRRNHKGPIPPQKTRKTCIRGGKVC-GNPCPICRDEKLGLH 111
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFI P G + TGVC KQ L+ IT+A + G + +P+ ++D
Sbjct: 112 YKNVKLLQQFICPHTGIVYDPTTTGVCMKQQKVLMKVITEATDHGFLPAHVPYIVLPHED 171
Query: 185 YF 186
Y
Sbjct: 172 YL 173
>gi|62185793|gb|AAH92315.1| LOC733189 protein [Xenopus laevis]
Length = 218
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG + +W YRRNHKG P+KTRKTCIR G + GNPCPICRDE L +H
Sbjct: 49 YLNSEEYLQRYGQKSIWADYRRNHKGPIPPQKTRKTCIRGGKVC-GNPCPICRDEKLGLH 107
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+KLL+QFI P G + TGVC KQ L+ IT+A + G + +P+ ++D
Sbjct: 108 YKNVKLLQQFICPHTGIVYDPTTTGVCMKQQKVLMKVITEATDHGFLPAHVPYIVLPHED 167
Query: 185 YF 186
Y
Sbjct: 168 YL 169
>gi|74207728|dbj|BAE40107.1| unnamed protein product [Mus musculus]
Length = 254
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P + +YL SE Y YG PVW Y
Sbjct: 24 QVPLQTLCTRGPPEEDAPSSLPVSPYESE--------PWKYLDSEEYHNRYGSRPVWADY 75
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++TRKTCIR+ +A GNPC ICRD L + N+KLLEQF+ G I
Sbjct: 76 RRNHKGGVPPQRTRKTCIRNNKVA-GNPCTICRDHKLHVDFRNVKLLEQFVCAHTGIIFH 134
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH KL AI +A+ GL+++ +P E D+
Sbjct: 135 APYTGVCMKQHKKLTQAIQKARECGLLSYYVPQVEPRDADF 175
>gi|351713109|gb|EHB16028.1| 28S ribosomal protein S18b, mitochondrial [Heterocephalus glaber]
Length = 253
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
Query: 49 PAKDRRNPVPVEI----SIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRS 104
P KD P P+ +YL SE Y YG P+W YRRNHKG ++TR+TCIR
Sbjct: 38 PGKDSLPPAPLSPYENEPWKYLESEEYLSRYGSRPIWADYRRNHKGSVPRQRTRRTCIRK 97
Query: 105 GIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQ 164
+A GNPCPICRD L + N+KLLEQF+ G I TGVC KQH KL AI +
Sbjct: 98 NKVA-GNPCPICRDHKLHVDFRNVKLLEQFVCTHTGIIFHAPYTGVCMKQHKKLTQAIQK 156
Query: 165 AKNKGLITFDLP 176
A++ GL+++ +P
Sbjct: 157 ARDHGLLSYHVP 168
>gi|301620286|ref|XP_002939509.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 169
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Query: 66 LASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHP 125
+ SE Y + YG + VW YRRNHKG P+KTRKTC+R G GNPCPICRD+ L ++
Sbjct: 1 MNSEEYLQQYGQKSVWADYRRNHKGPIPPQKTRKTCVRGGKTC-GNPCPICRDQKLGLNY 59
Query: 126 YNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
N+KLL+QFI P G + KTGVC KQ L+ AIT+A + GL+ +P+ ++DY
Sbjct: 60 RNVKLLQQFICPHTGTVYDPTKTGVCMKQQKALVKAITEATDHGLLPAHVPYIVLPHEDY 119
Query: 186 F 186
Sbjct: 120 L 120
>gi|84370073|ref|NP_001033613.1| 28S ribosomal protein S18b, mitochondrial [Bos taurus]
gi|83638632|gb|AAI09914.1| Mitochondrial ribosomal protein S18B [Bos taurus]
Length = 258
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 64 RYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLII 123
+YL SE Y G PVW YRRNHKG P++TRK CIR +A GNPCPICRD+ L +
Sbjct: 57 KYLDSEEYHNRNGSRPVWADYRRNHKGGIPPQRTRKMCIRGNKVA-GNPCPICRDQKLHV 115
Query: 124 HPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
N+KLL+QF+ G I TGVC KQH KL AI +A++ GL+++ +P
Sbjct: 116 DFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLSYHIP 168
>gi|76154848|gb|AAX26254.2| SJCHGC09615 protein [Schistosoma japonicum]
Length = 228
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 34 EEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFA 93
EE EN KP A + SI Y S+ ++ Y +PVW YYRRN+ G F
Sbjct: 62 EEITIRENYKYKPYKQAD-------LATSIEYFNSDVFRNTYKGKPVWFYYRRNYGGHFP 114
Query: 94 PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQK 153
P TRK+C+ G + + NPCPICRDEYL++H +I+LL+ FI+P + EI KTG+C++
Sbjct: 115 PSVTRKSCVHLGKLVSSNPCPICRDEYLVLHHQHIELLKHFINPDSFEIYPSSKTGICRR 174
Query: 154 QHLKLLVAITQAKNKGLITFDLPF 177
Q L + +A++ G I LPF
Sbjct: 175 QEKILQQEVEKARDLGYIQIWLPF 198
>gi|226481485|emb|CAX73640.1| 28S ribosomal protein S18b, mitochondrial precursor [Schistosoma
japonicum]
Length = 294
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 34 EEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFA 93
EE EN KP A + SI Y S+ ++ Y +PVW YYRRN+ G F
Sbjct: 55 EEITIRENYKYKPYKQAD-------LATSIEYFNSDVFRNTYKGKPVWFYYRRNYGGHFP 107
Query: 94 PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQK 153
P TRK+C+ G + + NPCPICRDEYL++H +I+LL+ FI+P + EI KTG+C++
Sbjct: 108 PSVTRKSCVHLGKLVSSNPCPICRDEYLVLHHQHIELLKHFINPDSFEIYPSSKTGICRR 167
Query: 154 QHLKLLVAITQAKNKGLITFDLPF 177
Q L + +A++ G I LPF
Sbjct: 168 QEKILQQEVEKARDLGYIQIWLPF 191
>gi|226481483|emb|CAX73639.1| 28S ribosomal protein S18b, mitochondrial precursor [Schistosoma
japonicum]
Length = 294
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 34 EEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFA 93
EE EN KP A + SI Y S+ ++ Y +PVW YYRRN+ G F
Sbjct: 55 EEITIRENYKYKPYKQAD-------LATSIEYFNSDVFRNTYKGKPVWFYYRRNYGGHFP 107
Query: 94 PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQK 153
P TRK+C+ G + + NPCPICRDEYL++H +I+LL+ FI+P + EI KTG+C++
Sbjct: 108 PSVTRKSCVHLGKLVSSNPCPICRDEYLVLHHQHIELLKHFINPDSFEIYPSSKTGICRR 167
Query: 154 QHLKLLVAITQAKNKGLITFDLPF 177
Q L + +A++ G I LPF
Sbjct: 168 QEKILQQEVEKARDLGYIQIWLPF 191
>gi|344252981|gb|EGW09085.1| 28S ribosomal protein S18b, mitochondrial [Cricetulus griseus]
Length = 323
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 64 RYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLII 123
++ S YQ YG PVW YRRNHKG P++TRKTCIR +A GNPCPICRD L +
Sbjct: 123 KFPGSPEYQNRYGSRPVWADYRRNHKGGIPPQRTRKTCIRKNKVA-GNPCPICRDHKLHV 181
Query: 124 HPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
N+KLLEQF+ G I TGVC KQH KL AI +A+ GL+ + +P
Sbjct: 182 DFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKAREYGLLRYYVP 234
>gi|226372256|gb|ACO51753.1| 28S ribosomal protein S18b, mitochondrial precursor [Rana
catesbeiana]
Length = 222
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG+ VW YRRNHK P+KTRK CIR+G + GNPCPICRD+ L +
Sbjct: 53 YLNSEEYLERYGENLVWSNYRRNHKRPIPPQKTRKKCIRAGKVC-GNPCPICRDQKLHVD 111
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
NI+LLEQFI G + KTGVC +Q+ KL+ AI+ A+ GL+T + +E + +
Sbjct: 112 YRNIRLLEQFICSHTGVVHDPTKTGVCMEQYKKLVKAISDAQEHGLLTVTIQHQEVTFGE 171
Query: 185 Y 185
Y
Sbjct: 172 Y 172
>gi|62955491|ref|NP_001017759.1| 28S ribosomal protein S18b, mitochondrial [Danio rerio]
gi|62204689|gb|AAH93356.1| Mitochondrial ribosomal protein S18B [Danio rerio]
gi|182889438|gb|AAI65094.1| Mrps18b protein [Danio rerio]
Length = 242
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG +PVW YRRNHKG P+KTRKTCIR G NPCPICRD +IIH
Sbjct: 72 YLKSEEYIERYGTKPVWTNYRRNHKGGIPPQKTRKTCIR-GDKKCANPCPICRDPNIIIH 130
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+ LL+QF P G + TGVC KQ L AI AK+ GL+ ++ +D
Sbjct: 131 YKNVNLLQQFFCPETGVVHDPTVTGVCMKQQKLLSKAIETAKDFGLLRAQFAHVDFTKED 190
Query: 185 YFPT 188
Y T
Sbjct: 191 YSNT 194
>gi|163914787|ref|NP_001106610.1| mitochondrial ribosomal protein S18B [Xenopus (Silurana)
tropicalis]
gi|156229976|gb|AAI52129.1| Mrps18b protein [Danio rerio]
gi|160773822|gb|AAI55448.1| LOC100127832 protein [Xenopus (Silurana) tropicalis]
Length = 242
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL SE Y + YG +PVW YRRNHKG P+KTRKTCIR G NPCPICRD +IIH
Sbjct: 72 YLKSEEYIERYGTKPVWTNYRRNHKGGIPPQKTRKTCIR-GDKKCANPCPICRDPNIIIH 130
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+ LL+QF P G + TGVC KQ L AI AK+ GL+ + +D
Sbjct: 131 YKNVNLLQQFFCPETGVVHDPTVTGVCMKQQKLLSKAIETAKDFGLLRAQFAHVGFTKED 190
Query: 185 YFPT 188
Y T
Sbjct: 191 YSNT 194
>gi|392354556|ref|XP_003751791.1| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S18b,
mitochondrial-like [Rattus norvegicus]
Length = 249
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P +++ +YL SE YQ YG PV Y
Sbjct: 17 QVPLQTLCTRGPPEEDAASSFPVPPHENK--------PWKYLNSEEYQNRYGSHPVXTDY 68
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++ + C+ +A GNPCPIC+D+ L + N+KLLEQF+ G I +
Sbjct: 69 RRNHKGHGEPQQQTRXCMNHNKVA-GNPCPICQDQKLHVDIRNVKLLEQFVCAHTGIIFN 127
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A+ GL+ + +P
Sbjct: 128 ASYTGVCMKQHKKLTQAIQKARKCGLLIYYVP 159
>gi|392334074|ref|XP_003753076.1| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S18b,
mitochondrial-like [Rattus norvegicus]
Length = 246
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P +++ +YL SE YQ YG PV Y
Sbjct: 17 QVPLQTLCTRGPPEEDAASSFPVPPHENK--------PWKYLNSEEYQNRYGSHPVXTDY 68
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRNHKG P++ + C+ +A GNPCPIC+D+ L + N+KLLEQF+ G I +
Sbjct: 69 RRNHKGHGEPQQQTRXCMNHNKVA-GNPCPICQDQKLHVDIRNVKLLEQFVCAHTGIIFN 127
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TGVC KQH KL AI +A+ GL+ + +P
Sbjct: 128 ASYTGVCMKQHKKLTQAIQKARKCGLLIYYVP 159
>gi|426352249|ref|XP_004065427.1| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S18b,
mitochondrial [Gorilla gorilla gorilla]
Length = 317
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 22/173 (12%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 74 QVPLQTLCTKAPSEEDSLSSVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 125
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLL--EQFISPVNGEI 142
RRNHKG P++TRKTCIR + GNPCPICRD L + + ++ + E+F+ +
Sbjct: 126 RRNHKGGVPPQRTRKTCIRRNKVV-GNPCPICRDHKLHVD-FRVRRVXTEKFVCIHYTVV 183
Query: 143 LSY----------MKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
Y + TGVC KQH +L AI +A++ GL+ + +P E D+
Sbjct: 184 FYYLLCLKEQDILLPTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDLDF 236
>gi|395736971|ref|XP_002816699.2| PREDICTED: 28S ribosomal protein S18b, mitochondrial [Pongo abelii]
Length = 257
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKALSEEDSLSPVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH-PYNIKLLEQFISPVNGEIL 143
RRNHKG P++TRKTCIR +A P +L P N+KLLEQF+ G I
Sbjct: 78 RRNHKGGVPPQRTRKTCIRGEDLAA---LPASFLTFLYHSPPQNVKLLEQFVCAHTGIIF 134
Query: 144 SYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
TGVC KQH +L AI +A++ GL+ + +P E D+
Sbjct: 135 HAPYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQVEPRDLDF 176
>gi|198420827|ref|XP_002129978.1| PREDICTED: similar to GH13236 [Ciona intestinalis]
Length = 255
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 75/121 (61%)
Query: 65 YLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIH 124
YL + ++ YG+ +W+ Y RN KG P++TR C R G ++TG+PCP+CRDE +++
Sbjct: 128 YLETADFRTLYGERLIWENYVRNFKGGVQPQQTRSNCFRKGEMSTGSPCPLCRDEKIMVT 187
Query: 125 PYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N+ LL FI G++ S ++TG C+ +H +L+ A + AK+ G + + F +Y+ D
Sbjct: 188 YNNLPLLHHFIDKQTGQLYSNLRTGACRFKHRRLVKAFSMAKDFGYLAAEAEFVKYDLTD 247
Query: 185 Y 185
+
Sbjct: 248 H 248
>gi|390338244|ref|XP_001197011.2| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 113
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 95 KKTRKTCIRSG---IIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVC 151
++TRK CIR GNPCPICRD L++H NIKLLEQFI P + I S +TG+C
Sbjct: 4 EETRKRCIRGNGEKQQICGNPCPICRDSNLVLHYKNIKLLEQFICPHSWNIYSTYRTGLC 63
Query: 152 QKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYF 186
++QH L I +A+ G++ F +P+ EY Y+DY+
Sbjct: 64 RRQHKALCATIEKARQYGVLPFSVPYIEYKYEDYY 98
>gi|402593756|gb|EJW87683.1| hypothetical protein WUBG_01406 [Wuchereria bancrofti]
Length = 260
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 59 VEISIRYLASEAYQKCYGDEPVWKYYRRNHKG--MFAPKKTRKTCI-RSGIIATGNPCPI 115
+E I Y+ S+ Y Y PV+ YRRN KG +F PK R CI + G + CPI
Sbjct: 76 LEEQIAYMNSKVYADTYKGMPVYHSYRRNFKGQAIFMPK-PRMFCIDKEGKFKVNHACPI 134
Query: 116 CRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDL 175
CRDEYL N L+ QF+ IL K G+C Q+ +L + +AK G I F +
Sbjct: 135 CRDEYLFFDYRNPALILQFLFDQTDRILPLKKLGLCFDQYAQLRAQLLKAKEHGFIKFAV 194
Query: 176 PFREYNYKDYFP 187
PF+ +NYK ++P
Sbjct: 195 PFQNFNYKKWYP 206
>gi|170571109|ref|XP_001891605.1| LP10852p [Brugia malayi]
gi|158603818|gb|EDP39599.1| LP10852p, putative [Brugia malayi]
Length = 261
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 59 VEISIRYLASEAYQKCYGDEPVWKYYRRNHKG--MFAPKKTRKTCI-RSGIIATGNPCPI 115
+E I Y+ S+ Y Y PV+ YRRN KG +F PK R CI + G + CPI
Sbjct: 77 LEEQIAYMNSKVYADTYKGMPVYHSYRRNFKGQAIFMPK-PRMFCIDKEGRFKVNHACPI 135
Query: 116 CRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDL 175
CRDEYL N L+ QF+ IL K G+C Q+ +L + +AK G I F +
Sbjct: 136 CRDEYLFFDYRNPALILQFLFDQTDRILPLKKLGLCFDQYAQLRAQLLKAKEHGFIKFAV 195
Query: 176 PFREYNYKDYFP 187
PF+ +NYK ++P
Sbjct: 196 PFQNFNYKKWYP 207
>gi|444727361|gb|ELW67860.1| 28S ribosomal protein S18b, mitochondrial [Tupaia chinensis]
Length = 234
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 73/151 (48%), Gaps = 32/151 (21%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q + +C + +E+ PV P +D +YL SE YQ YG PVW Y
Sbjct: 26 QVPIQTLCSKAPSEKESLPPVPVSPYEDE--------PWKYLDSEEYQNRYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILS 144
RRN+KG P++TRKTC+ N+KLLEQF+ G I
Sbjct: 78 RRNYKGGIPPQRTRKTCV------------------------NVKLLEQFVCAHTGIIFH 113
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDL 175
TGVC KQH KL AI +A++ GL+++ +
Sbjct: 114 APYTGVCMKQHKKLTQAIQKARDHGLLSYHI 144
>gi|393905276|gb|EJD73917.1| hypothetical protein LOAG_18695 [Loa loa]
Length = 285
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 59 VEISIRYLASEAYQKCYGDEPVWKYYRRNHKG--MFAPKKTRKTCI-RSGIIATGNPCPI 115
+E I Y+ S+ Y Y PV+ +YRRN KG +F PK R C+ + G + CPI
Sbjct: 102 LEEQIAYMNSKVYADTYKGMPVYHFYRRNFKGQAIFMPK-PRMFCVDKEGKFRVNHACPI 160
Query: 116 CRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDL 175
CRDEYL N L+ QF+ IL K G+C Q+ +L + +A+ G I F +
Sbjct: 161 CRDEYLFFDYRNPALILQFLFNHTDRILPLKKLGLCFDQYTQLRAQLLKAREHGFIKFAV 220
Query: 176 PFREYNYKDYFP 187
PF+ ++YK+++P
Sbjct: 221 PFQNFDYKNWYP 232
>gi|324522384|gb|ADY48052.1| 28S ribosomal protein S18b [Ascaris suum]
Length = 259
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Query: 59 VEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPK-KTRKTCI-RSGIIATGNPCPIC 116
+E I Y+ S+AY+ Y P++ +Y+RNHKG + + R CI + G N CPIC
Sbjct: 75 IEEQIAYMKSKAYEDAYKGLPIYHWYKRNHKGQAILQPRPRLYCIDKEGKFNVNNACPIC 134
Query: 117 RDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
RDEYL N L+EQF++ + + ++G+C +Q+ +L + +AK G I F +P
Sbjct: 135 RDEYLFFDYRNPALIEQFLASGTDQPIPLKRSGLCIEQYNQLKAQLLKAKEYGTIKFGVP 194
Query: 177 FREYNYKDYF 186
FR ++Y ++
Sbjct: 195 FRNFDYSIWY 204
>gi|149031790|gb|EDL86725.1| mitochondrial ribosomal protein S18B, isoform CRA_c [Rattus
norvegicus]
Length = 234
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 69/147 (46%), Gaps = 32/147 (21%)
Query: 30 RICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHK 89
+ C E+ PV P ++ +YL SE YQ YG PVW YRRNHK
Sbjct: 32 QTLCTRSPPEDASSSLPVSPFENE--------PWKYLDSEEYQNRYGSRPVWADYRRNHK 83
Query: 90 GMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTG 149
G P++TRKTCI N+KLLEQF+ G I TG
Sbjct: 84 GGVPPQRTRKTCI------------------------NVKLLEQFVCAHTGIIFHAPYTG 119
Query: 150 VCQKQHLKLLVAITQAKNKGLITFDLP 176
VC KQH KL AI +A+ GL+++ +P
Sbjct: 120 VCMKQHKKLTQAIQKAREYGLLSYYVP 146
>gi|156393424|ref|XP_001636328.1| predicted protein [Nematostella vectensis]
gi|156223430|gb|EDO44265.1| predicted protein [Nematostella vectensis]
Length = 244
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 78 EPVWKYYRRNHKGMFAPKKTRKTCIR-SGIIATGNPCPICR---DEYLIIHPYNIKLLEQ 133
+P W YRRNHKG PK+TR C + T NPCP+CR ++ I ++ L Q
Sbjct: 118 KPAWAGYRRNHKGQIPPKRTRLRCTTIDKQLLTQNPCPVCRIRVEKNYEISSKDVSFLTQ 177
Query: 134 FISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDL 175
F+SP GEIL KTGVC++Q KLL AI +A++KG + F +
Sbjct: 178 FMSPHTGEILHTGKTGVCRQQQKKLLHAIEEAQDKGYLPFTI 219
>gi|341885858|gb|EGT41793.1| hypothetical protein CAEBREN_18245 [Caenorhabditis brenneri]
Length = 238
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 63 IRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKT-RKTCI-RSGIIATGNPCPICRDEY 120
+ Y+ S AY + Y P++++Y+RN KG + R CI + G + CP+CRDEY
Sbjct: 58 VSYMKSRAYAEAYKGLPIYRWYKRNIKGQSKLQPPPRLFCIDKHGRFNLNHACPVCRDEY 117
Query: 121 LIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREY 180
L N L+EQF++ + + +K+G+C++Q+ L + +AK G ITF + FR +
Sbjct: 118 LYFDYRNPSLIEQFLADGTDQPIDILKSGLCREQYTMLRAQLLKAKEHGTITFGVEFRNF 177
Query: 181 NYKDYFPT 188
+Y+ ++ +
Sbjct: 178 DYRQWYKS 185
>gi|308510694|ref|XP_003117530.1| hypothetical protein CRE_01951 [Caenorhabditis remanei]
gi|308242444|gb|EFO86396.1| hypothetical protein CRE_01951 [Caenorhabditis remanei]
Length = 238
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 63 IRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKT-RKTCI-RSGIIATGNPCPICRDEY 120
I Y+ S AY + Y P++++Y+RN KG + R CI + G + CP+CRDEY
Sbjct: 58 ISYMKSRAYAEAYKGLPIYRWYKRNIKGQSKLQPPPRLFCIDKHGRFNLNHACPVCRDEY 117
Query: 121 LIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREY 180
L N L+EQF++ + + +K+G+C++Q+ L + +A+ G ITF + FR +
Sbjct: 118 LYFDYRNPSLIEQFLADGTDQPIDILKSGLCREQYTLLRAQLLKAREHGTITFGVEFRNF 177
Query: 181 NYKDYFPT 188
+Y+ ++ +
Sbjct: 178 DYRQWYKS 185
>gi|17536259|ref|NP_495800.1| Protein MRPS-18B [Caenorhabditis elegans]
gi|3879814|emb|CAA91421.1| Protein MRPS-18B [Caenorhabditis elegans]
Length = 238
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 63 IRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKT-RKTCI-RSGIIATGNPCPICRDEY 120
I Y+ S Y + Y P++++Y+RN KG + R CI + G + CP+CRDEY
Sbjct: 58 ISYMKSRGYAEAYKGLPIYRWYKRNIKGQSKLQPPPRLFCIDKHGRFNLNHACPVCRDEY 117
Query: 121 LIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREY 180
L N L+EQF++ + + +K+G+C++Q+ L + +AK G ITF + FR +
Sbjct: 118 LYFDYRNPGLIEQFLADGTDQPIDILKSGLCREQYTLLRAQLLKAKEHGTITFGVEFRNF 177
Query: 181 NYKDYFPT 188
+Y+ ++ +
Sbjct: 178 DYRQWYKS 185
>gi|194376562|dbj|BAG57427.1| unnamed protein product [Homo sapiens]
Length = 121
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C + E++ P+ P KD +YL SE YQ+ YG PVW Y
Sbjct: 26 QVPLQTLCTKAPSEEDSLSSVPISPYKDE--------PWKYLESEEYQERYGSRPVWADY 77
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLII 123
RRNHKG P++TRKTCIR + GNPCPICRD L +
Sbjct: 78 RRNHKGGVPPQRTRKTCIRRNKVV-GNPCPICRDHKLHV 115
>gi|268559984|ref|XP_002637935.1| Hypothetical protein CBG04747 [Caenorhabditis briggsae]
Length = 240
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 63 IRYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKT---RKTCI-RSGIIATGNPCPICRD 118
+ Y+ S AY + Y P++++Y+RN K K R CI + G + CP+CRD
Sbjct: 58 VSYMKSRAYAEAYKGLPIYRWYKRNIKFSGQSKLQPPPRLFCIDKHGRFNLNHACPVCRD 117
Query: 119 EYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFR 178
EYL N L+EQF++ + + +K+G+C++Q+ L + +AK G I F + FR
Sbjct: 118 EYLYFDYRNPSLIEQFLADGTDQPIDILKSGLCREQYTLLRAQLLKAKEHGTIPFGVEFR 177
Query: 179 EYNYKDYFPT 188
++Y+ ++ +
Sbjct: 178 NFDYRQWYKS 187
>gi|148691307|gb|EDL23254.1| mitochondrial ribosomal protein S18B, isoform CRA_a [Mus musculus]
Length = 141
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P + +YL SE Y YG PVW Y
Sbjct: 24 QVPLQTLCTRGPPEEDAPSSLPVSPYESE--------PWKYLDSEEYHNRYGSRPVWADY 75
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLII 123
RRNHKG P++TRKTCIR+ +A GNPCPICRD L +
Sbjct: 76 RRNHKGGVPPQRTRKTCIRNNKVA-GNPCPICRDHKLHV 113
>gi|148691311|gb|EDL23258.1| mitochondrial ribosomal protein S18B, isoform CRA_e [Mus musculus]
Length = 119
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 25 QFSLSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYY 84
Q L +C E+ PV P + +YL SE Y YG PVW Y
Sbjct: 24 QVPLQTLCTRGPPEEDAPSSLPVSPYESE--------PWKYLDSEEYHNRYGSRPVWADY 75
Query: 85 RRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLII 123
RRNHKG P++TRKTCIR+ +A GNPCPICRD L +
Sbjct: 76 RRNHKGGVPPQRTRKTCIRNNKVA-GNPCPICRDHKLHV 113
>gi|149031789|gb|EDL86724.1| mitochondrial ribosomal protein S18B, isoform CRA_b [Rattus
norvegicus]
Length = 122
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 64 RYLASEAYQKCYGDEPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLII 123
+YL SE YQ YG PVW YRRNHKG P++TRKTCIR +A GNPCPICRD L +
Sbjct: 58 KYLDSEEYQNRYGSRPVWADYRRNHKGGVPPQRTRKTCIRKDKVA-GNPCPICRDHKLHV 116
>gi|312085222|ref|XP_003144593.1| hypothetical protein LOAG_09016 [Loa loa]
Length = 214
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 59 VEISIRYLASEAYQKCYGDEPVWKYYRRNHKG--MFAPKKTRKTCI-RSGIIATGNPCPI 115
+E I Y+ S+ Y Y PV+ +YRRN KG +F PK R C+ + G + CPI
Sbjct: 102 LEEQIAYMNSKVYADTYKGMPVYHFYRRNFKGQAIFMPK-PRMFCVDKEGKFRVNHACPI 160
Query: 116 CRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CRDEYL N L+ QF+ IL K G+C Q+ +L + +A+ G
Sbjct: 161 CRDEYLFFDYRNPALILQFLFNHTDRILPLKKLGLCFDQYTQLRAQLLKAREHG 214
>gi|341896404|gb|EGT52339.1| hypothetical protein CAEBREN_08245 [Caenorhabditis brenneri]
Length = 260
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 98 RKTCI-RSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHL 156
R CI + G + CP+CRDEYL N L+EQF++ + + +K+G+C++Q+
Sbjct: 116 RLFCIDKHGRFNLNHACPVCRDEYLYFDYRNPSLIEQFLADGTDQPIDILKSGLCREQYT 175
Query: 157 KLLVAITQAKNKGLITFDLPFREYNYKDYFPT 188
L + +AK G ITF + FR ++Y+ ++ +
Sbjct: 176 MLRAQLLKAKEHGTITFGVEFRNFDYRQWYKS 207
>gi|260797431|ref|XP_002593706.1| hypothetical protein BRAFLDRAFT_117250 [Branchiostoma floridae]
gi|229278934|gb|EEN49717.1| hypothetical protein BRAFLDRAFT_117250 [Branchiostoma floridae]
Length = 201
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 45/59 (76%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
N++LL+ FI P GE+ + ++TGVCQK+H L+ I +AK+ GL++F +P +EY+Y++Y
Sbjct: 130 NVELLQHFICPHTGEMHNVLRTGVCQKKHRLLIKEIEKAKDHGLLSFTVPHKEYDYEEY 188
>gi|313233066|emb|CBY24177.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 35 EEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDEPVWKYYRRNHKGMFAP 94
E T+EN D++ +D E + ++ + K DE VW + RN+K +
Sbjct: 79 EGDTKENLDQRYDQYVRD----FGFEPEEYFDRADYFAKYGTDEAVWHSWVRNNKRSWPS 134
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQ 154
R+ C N CP+ RD YL+ H N KLL+QFI P G I++ ++TG C +
Sbjct: 135 MGQREACYTPSYTRK-NCCPLHRDVYLLPHYKNTKLLKQFIDPTTGNIMTGLRTGCCLQA 193
Query: 155 HLKLLVAITQAKNKGLI 171
++L VA+ A G +
Sbjct: 194 EIELGVALQLAWQYGYL 210
>gi|196012333|ref|XP_002116029.1| hypothetical protein TRIADDRAFT_60057 [Trichoplax adhaerens]
gi|190581352|gb|EDV21429.1| hypothetical protein TRIADDRAFT_60057 [Trichoplax adhaerens]
Length = 164
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Query: 78 EPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISP 137
+PVW YRRNHKGM P+ R G +A+ NPCPICR + + N+ L+QFISP
Sbjct: 78 KPVWASYRRNHKGMIPPQ-------RRGKVAS-NPCPICRQKSGTLDYTNVNFLKQFISP 129
Query: 138 VNGEILSYMKTGV 150
G+I TG+
Sbjct: 130 FTGKIYEPFVTGL 142
>gi|196000654|ref|XP_002110195.1| hypothetical protein TRIADDRAFT_53948 [Trichoplax adhaerens]
gi|190588319|gb|EDV28361.1| hypothetical protein TRIADDRAFT_53948 [Trichoplax adhaerens]
Length = 127
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 94 PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQK 153
P++TR+ G CPICR+ ++ LL+QFIS G I KTG+C K
Sbjct: 40 PQETREKMQNHG-------CPICRNNIKNFGYKDVLLLKQFISD-EGRIYGKRKTGLCAK 91
Query: 154 QHLKLLVAITQAKNKGLI 171
QH K+L AI +++ +GL+
Sbjct: 92 QHRKVLKAIKRSRAEGLL 109
>gi|407261047|ref|XP_003946142.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Mus
musculus]
gi|407262947|ref|XP_003945397.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like [Mus
musculus]
Length = 160
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
N+KLLEQF+ G I TGVC KQH KL AI +A+ GL+++ +P E D+
Sbjct: 23 NVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARECGLLSYYVPQVEPRDADF 81
>gi|149031791|gb|EDL86726.1| mitochondrial ribosomal protein S18B, isoform CRA_d [Rattus
norvegicus]
Length = 166
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
N+KLLEQF+ G I TGVC KQH KL AI +A+ GL+++ +P
Sbjct: 29 NVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKAREYGLLSYYVP 78
>gi|26344970|dbj|BAC36134.1| unnamed protein product [Mus musculus]
gi|26344988|dbj|BAC36143.1| unnamed protein product [Mus musculus]
gi|148691309|gb|EDL23256.1| mitochondrial ribosomal protein S18B, isoform CRA_c [Mus musculus]
Length = 162
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
N+KLLEQF+ G I TGVC KQH KL AI +A+ GL+++ +P E D+
Sbjct: 25 NVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARECGLLSYYVPQVEPRDADF 83
>gi|260830511|ref|XP_002610204.1| hypothetical protein BRAFLDRAFT_121515 [Branchiostoma floridae]
gi|229295568|gb|EEN66214.1| hypothetical protein BRAFLDRAFT_121515 [Branchiostoma floridae]
Length = 201
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CPIC L ++ +L QF+ P +G+++ TGVC QH KL +AI +AK GL
Sbjct: 76 CPIC-SRNLTFTWKDVHILSQFMRP-DGQVMPQQVTGVCNTQHKKLFMAIEEAKQAGLF 132
>gi|391344454|ref|XP_003746514.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Metaseiulus occidentalis]
Length = 143
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 22/97 (22%)
Query: 76 GDEPVWKYYRRNHKGMFAP-KKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQF 134
DEP+W M P KKTR+ CI +CR++ + + N +LL QF
Sbjct: 41 SDEPIWD--------MENPFKKTRRECI------------LCRNKIEVDYK-NTQLLSQF 79
Query: 135 ISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
+S GE+ TG+C+ QH K+ +A+ A+ G++
Sbjct: 80 VSNYTGELYQKHITGLCEHQHQKVRLALHHAQCIGIL 116
>gi|156371103|ref|XP_001628605.1| predicted protein [Nematostella vectensis]
gi|156215586|gb|EDO36542.1| predicted protein [Nematostella vectensis]
Length = 201
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 83 YYRRN-HKGMFA-PKKTRKTCIRSGIIATGNPCPICRDEYLIIHPY-NIKLLEQFISPVN 139
Y++RN H G A K + + I+ CPIC II Y ++ L QF+SP
Sbjct: 58 YHKRNVHVGGHAYAIKASELSKDNAIVKDSVGCPICSRN--IIFSYKDVLFLSQFLSP-E 114
Query: 140 GEILSYMKTGVCQKQHLKLLVAITQAKNKGL 170
G +L+ +TGVC+KQ LKL AI ++ G
Sbjct: 115 GNLLNRRQTGVCKKQQLKLENAIKLSRRLGF 145
>gi|327273057|ref|XP_003221299.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Anolis
carolinensis]
Length = 136
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDY 185
NI+LL QF+SP G I TG+C+K+ +L AI +A+ G++ F YN +++
Sbjct: 71 NIQLLSQFVSPYTGRIFGRHITGLCEKKQSELSKAIRRARKTGMVPF------YNMEEF 123
>gi|350594082|ref|XP_003483837.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2 [Sus
scrofa]
Length = 181
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++HLK+ + A G
Sbjct: 55 CPICR--WNLKHKYNYEDVLLLSQFIRP-HGGMLPRRITGLCQEEHLKIEECVKMAHRAG 111
Query: 170 LITFDLP 176
L+ P
Sbjct: 112 LLPNHRP 118
>gi|326428552|gb|EGD74122.1| 30S ribosomal protein S18 [Salpingoeca sp. ATCC 50818]
Length = 165
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 113 CPIC--RDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGL 170
CP C ++E I N++ L QF+SP G+IL TG+C K K+ AI ++++ GL
Sbjct: 83 CPACPYKEE---IDYKNVRFLSQFVSPQTGQILRRSSTGLCSKAQRKIAKAIKRSRHFGL 139
Query: 171 I 171
+
Sbjct: 140 M 140
>gi|350594080|ref|XP_003483836.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1 [Sus
scrofa]
Length = 196
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++HLK+ + A G
Sbjct: 70 CPICR--WNLKHKYNYEDVLLLSQFIRP-HGGMLPRRITGLCQEEHLKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|350586688|ref|XP_003482247.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like, partial
[Sus scrofa]
Length = 197
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++HLK+ + A G
Sbjct: 71 CPICR--WNLKHKYNYEDVLLLSQFIRP-HGGMLPRRITGLCQEEHLKIEECVKMAHRAG 127
Query: 170 LI 171
L+
Sbjct: 128 LL 129
>gi|114607575|ref|XP_001139938.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1 [Pan
troglodytes]
Length = 144
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLPFREYN 181
L FR N
Sbjct: 127 LGFLKELFRRAN 138
>gi|426353296|ref|XP_004044133.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 3
[Gorilla gorilla gorilla]
Length = 144
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLPFREYN 181
L FR N
Sbjct: 127 LGFLKELFRRAN 138
>gi|196009376|ref|XP_002114553.1| hypothetical protein TRIADDRAFT_58497 [Trichoplax adhaerens]
gi|190582615|gb|EDV22687.1| hypothetical protein TRIADDRAFT_58497 [Trichoplax adhaerens]
Length = 113
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 86 RNHKGMFAPKKTRKT--------CIRSGIIATGNP--CPICRDEYLIIHPYNIKLLEQFI 135
R+H +F+ TR I++ + GNP C +C+ + I N++LL QFI
Sbjct: 5 RHHTAIFSAGPTRARRLKPEELRPIKNKVDEDGNPLPCALCK---IKIDYKNVRLLSQFI 61
Query: 136 SPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREY 180
S G I TG+C + +L AI +A+ G + + + EY
Sbjct: 62 SNDTGMIYGRRITGLCGHKQKELTKAIRRARTMGFMPYTYKYPEY 106
>gi|395832426|ref|XP_003789272.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Otolemur
garnettii]
Length = 196
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYEDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|297713037|ref|XP_002833021.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1
[Pongo abelii]
Length = 196
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|8922511|ref|NP_060605.1| 28S ribosomal protein S18a, mitochondrial isoform 1 precursor [Homo
sapiens]
gi|24212201|sp|Q9NVS2.1|RT18A_HUMAN RecName: Full=28S ribosomal protein S18a, mitochondrial;
Short=MRP-S18-a; Short=Mrps18a; Short=S18mt-a; AltName:
Full=28S ribosomal protein S18-3, mitochondrial;
Short=MRP-S18-3; Flags: Precursor
gi|7022650|dbj|BAA91675.1| unnamed protein product [Homo sapiens]
gi|13620905|dbj|BAB41005.1| mitochondrial ribosomal protein S18a [Homo sapiens]
gi|14714476|gb|AAH10364.1| Mitochondrial ribosomal protein S18A [Homo sapiens]
gi|119624629|gb|EAX04224.1| mitochondrial ribosomal protein S18A, isoform CRA_a [Homo sapiens]
gi|312152244|gb|ADQ32634.1| mitochondrial ribosomal protein S18A [synthetic construct]
Length = 196
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|114607569|ref|XP_001140445.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 4 [Pan
troglodytes]
gi|397526767|ref|XP_003833288.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1 [Pan
paniscus]
gi|397526769|ref|XP_003833289.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2 [Pan
paniscus]
gi|410040850|ref|XP_003950900.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Pan
troglodytes]
gi|410040852|ref|XP_003950901.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Pan
troglodytes]
gi|410040854|ref|XP_003950902.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Pan
troglodytes]
gi|410214628|gb|JAA04533.1| mitochondrial ribosomal protein S18A [Pan troglodytes]
gi|410263900|gb|JAA19916.1| mitochondrial ribosomal protein S18A [Pan troglodytes]
gi|410288180|gb|JAA22690.1| mitochondrial ribosomal protein S18A [Pan troglodytes]
Length = 196
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|383872503|ref|NP_001244564.1| 28S ribosomal protein S18a, mitochondrial [Macaca mulatta]
gi|402867086|ref|XP_003897699.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1
[Papio anubis]
gi|380814254|gb|AFE79001.1| 28S ribosomal protein S18a, mitochondrial isoform 1 precursor
[Macaca mulatta]
gi|383419621|gb|AFH33024.1| 28S ribosomal protein S18a, mitochondrial isoform 1 precursor
[Macaca mulatta]
gi|384947960|gb|AFI37585.1| 28S ribosomal protein S18a, mitochondrial isoform 1 precursor
[Macaca mulatta]
gi|384947962|gb|AFI37586.1| 28S ribosomal protein S18a, mitochondrial isoform 1 precursor
[Macaca mulatta]
Length = 196
Score = 42.7 bits (99), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|402867088|ref|XP_003897700.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Papio anubis]
Length = 204
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 78 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 134
Query: 170 LITFDLP 176
L+ P
Sbjct: 135 LLPNHRP 141
>gi|440796340|gb|ELR17449.1| ribosomal protein S18, putative [Acanthamoeba castellanii str.
Neff]
Length = 458
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 106 IIATGNPCPICR--DEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAIT 163
++ C CR + ++ P N+ LL F++P G+I+ G C++ KL I
Sbjct: 336 LMKKAKKCVFCRPSAQRPVLDPMNVSLLTMFLTPT-GDIIGRRHNGNCRRHQRKLATTIK 394
Query: 164 QAKNKGLITF 173
+AK+ G+ ++
Sbjct: 395 RAKHMGIFSY 404
>gi|426353292|ref|XP_004044131.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1
[Gorilla gorilla gorilla]
Length = 196
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|332234157|ref|XP_003266277.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 4
[Nomascus leucogenys]
Length = 144
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCREEHRKIEECVKMAHRAG 126
Query: 170 LITFDLPFREYN 181
L FR N
Sbjct: 127 LGFLKELFRRTN 138
>gi|117925749|ref|YP_866366.1| 30S ribosomal protein S18 [Magnetococcus marinus MC-1]
gi|205558242|sp|A0LAG7.1|RS18_MAGSM RecName: Full=30S ribosomal protein S18
gi|117609505|gb|ABK44960.1| SSU ribosomal protein S18P [Magnetococcus marinus MC-1]
Length = 106
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
CP C D+ L I + K+L ++I+ G+++ TGVC KL VAI +A+N L+
Sbjct: 44 CPFCADKGLKIDYKDPKMLSRYITE-RGKMVPSRITGVCAPHQRKLSVAIKRARNIALLP 102
Query: 173 F 173
F
Sbjct: 103 F 103
>gi|444725438|gb|ELW66002.1| 28S ribosomal protein S18a, mitochondrial [Tupaia chinensis]
Length = 196
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 99 KTCIRSGIIATGNP------------CPICRDEYLIIHPYN---IKLLEQFISPVNGEIL 143
KT I G I TG P CPICR + + H YN + LL QFI P +G +L
Sbjct: 45 KTTILEGRI-TGTPKESPDPPNPSGQCPICR--WNLKHKYNYEDVLLLSQFIRP-HGGML 100
Query: 144 SYMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TG+CQ++H K+ + A GL P
Sbjct: 101 PRKVTGLCQEEHRKIEECVKMAHRAGLFPNHRP 133
>gi|322433963|ref|YP_004216175.1| 30S ribosomal protein S18 [Granulicella tundricola MP5ACTX9]
gi|321161690|gb|ADW67395.1| ribosomal protein S18 [Granulicella tundricola MP5ACTX9]
Length = 129
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C ++ I +++LL+ F++ G+I+ TGVC + +L +AI Q++N L+
Sbjct: 66 CKFCTEKIDAISYRDVRLLQGFVAE-RGKIVPRRLTGVCTRHQRRLSLAIKQSRNIALLA 124
Query: 173 FDLPF 177
F F
Sbjct: 125 FAARF 129
>gi|427785957|gb|JAA58430.1| Putative mitochondrial ribosomal protein s18c [Rhipicephalus
pulchellus]
Length = 158
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
C +C+ + + N+KLL QF+SP G+I TG+CQKQ + I +AK G++
Sbjct: 74 CILCKHNIQVDY-KNVKLLSQFVSPYTGKIYEKHITGLCQKQQESVKREIMKAKKCGMM 131
>gi|281209273|gb|EFA83446.1| hypothetical protein PPL_03594 [Polysphondylium pallidum PN500]
Length = 435
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 20 IPPQRQFS-LSRICCEEEGTEENKDEKPVDPAKDRRNPVPVEISIRYLASEAYQKCYGDE 78
IPP+ + L + EE + ++ + K R NP+ E+ + A K +
Sbjct: 187 IPPENRLDILEKERIHEEMLAKAEEVGAENIEKYRVNPMLEEMRAKKAAKAVEDKSSTEY 246
Query: 79 PVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNP----CPICRDEYLIIHPYNIKLLEQF 134
+ + +G+F + TR +G GN C +C D + P N+ LL +
Sbjct: 247 LLRHITKLERQGVFDDQVTRSPT--TGKEVVGNKKFPKCLLCFDYGWKVEPMNVPLLSIY 304
Query: 135 ISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITF 173
++ +G+IL TG C K K+ I QAK+ GL ++
Sbjct: 305 LNN-DGDILPRYITGNCLKHQKKIARTIKQAKHLGLYSY 342
>gi|156741510|ref|YP_001431639.1| 30S ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
gi|205556478|sp|A7NJF1.1|RS181_ROSCS RecName: Full=30S ribosomal protein S18 1
gi|156232838|gb|ABU57621.1| ribosomal protein S18 [Roseiflexus castenholzii DSM 13941]
Length = 90
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C D+ ++ ++K L++ +S G+IL +TGVC + L VAI +A++ L+
Sbjct: 24 CAFCADKIRVVDYKDVKRLQRCMSE-RGKILPRRRTGVCARHQRSLTVAIKRARHMALLP 82
Query: 173 F 173
F
Sbjct: 83 F 83
>gi|91091168|ref|XP_971303.1| PREDICTED: similar to ubiquitin fusion degradation protein 2
[Tribolium castaneum]
gi|270014097|gb|EFA10545.1| hypothetical protein TcasGA2_TC012801 [Tribolium castaneum]
Length = 131
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C +CR + +I + N+KLL QF SP G + TG+C Q + I +A+N GL+
Sbjct: 47 CLLCRHK-IIPNYKNVKLLSQFQSPYTGRVYGKHITGLCDTQQKLVEAEIIKAQNAGLMA 105
>gi|350586508|ref|XP_003482200.1| PREDICTED: 28S ribosomal protein S18b, mitochondrial-like, partial
[Sus scrofa]
Length = 127
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 141 EILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKDYFPT 188
+++ ++ TGVC KQH KL AI +A++ GL+ + +P E D+ T
Sbjct: 2 QVIYFLSTGVCMKQHKKLTQAIQKARDHGLLRYHIPQVEPRDLDFSTT 49
>gi|332234151|ref|XP_003266274.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1
[Nomascus leucogenys]
gi|441648896|ref|XP_004090920.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Nomascus
leucogenys]
Length = 196
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCREEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|426250349|ref|XP_004018899.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1
[Ovis aries]
Length = 196
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYSYEDVLLLSQFIRP-HGGMLPRRVTGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|344264269|ref|XP_003404215.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Loxodonta africana]
Length = 196
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 18/92 (19%)
Query: 100 TCIRSGIIATGNP------------CPICRDEYLIIHPY---NIKLLEQFISPVNGEILS 144
T I G I G P CPICR + + H Y ++ LL QFI P +G +L
Sbjct: 45 TTIIKGHITGGTPKESPNPPNPSGQCPICR--WNLKHKYSYEDVLLLSQFIRP-HGGMLP 101
Query: 145 YMKTGVCQKQHLKLLVAITQAKNKGLITFDLP 176
TG+CQ++H K+ + A GL+ P
Sbjct: 102 RRITGLCQEEHRKIEECVKMAHRAGLLPNHRP 133
>gi|403261378|ref|XP_003923100.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 196
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPQKVTGLCREEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|241653590|ref|XP_002410487.1| ribosomal protein S18C, putative [Ixodes scapularis]
gi|215501661|gb|EEC11155.1| ribosomal protein S18C, putative [Ixodes scapularis]
gi|442754063|gb|JAA69191.1| Putative ribosomal protein s18c [Ixodes ricinus]
Length = 96
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 110 GNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
G C +C+ + + N+KLL QF+S G+I TG+C+KQ ++ I +A+ G
Sbjct: 9 GRKCILCKHNIDVDYK-NVKLLSQFVSSYTGKIYEKHITGLCEKQQRRVKTEIFKARKCG 67
Query: 170 LI 171
L+
Sbjct: 68 LM 69
>gi|149599697|ref|XP_001514339.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 159
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 113 CPICRDEYLIIHPY-NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CPICR + Y ++ LL QFI P +G +L TG+CQ++H K+ + A GL+
Sbjct: 33 CPICRWNLKYKYSYEDVLLLSQFIRP-HGGMLPRRVTGLCQEEHRKIEECVKMAHRAGLL 91
>gi|296198273|ref|XP_002746638.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Callithrix
jacchus]
Length = 196
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCREEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|148657503|ref|YP_001277708.1| 30S ribosomal protein S18 [Roseiflexus sp. RS-1]
gi|205556677|sp|A5UYQ5.1|RS182_ROSS1 RecName: Full=30S ribosomal protein S18 2
gi|148569613|gb|ABQ91758.1| SSU ribosomal protein S18P [Roseiflexus sp. RS-1]
Length = 90
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C D+ ++ ++K L++ +S G+IL +TGVC + L VAI +A++ L+
Sbjct: 24 CMFCADQIRVVDYKDVKRLQRCMSE-RGKILPRRRTGVCARHQRSLTVAIKRARHMALLP 82
Query: 173 F 173
F
Sbjct: 83 F 83
>gi|431838331|gb|ELK00263.1| 28S ribosomal protein S18a, mitochondrial [Pteropus alecto]
Length = 196
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYGYEDVLLLSQFIRP-HGGMLPRRITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|149069350|gb|EDM18791.1| mitochondrial ribosomal protein S18A, isoform CRA_c [Rattus
norvegicus]
Length = 149
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYEDVLLLSQFIRP-HGGMLPRRITGLCREEHRKMEECVKMAHRAG 126
Query: 170 LITFDLP 176
L P
Sbjct: 127 LFPNHRP 133
>gi|296474445|tpg|DAA16560.1| TPA: 28S ribosomal protein S18a, mitochondrial precursor [Bos
taurus]
Length = 196
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYSYEDVLLLSQFIRP-HGGMLPRSITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|225873662|ref|YP_002755121.1| 30S ribosomal protein S18 [Acidobacterium capsulatum ATCC 51196]
gi|254765401|sp|C1F903.1|RS18_ACIC5 RecName: Full=30S ribosomal protein S18
gi|225791607|gb|ACO31697.1| ribosomal protein S18 [Acidobacterium capsulatum ATCC 51196]
Length = 105
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C ++ I +++LL+QF++ G+I+ TGVC +L AI QA+N L+
Sbjct: 42 CKFCTEKIDAIPYRDVRLLQQFVAE-RGKIVPRRLTGVCTTHQRRLTRAIKQARNIALLP 100
Query: 173 F 173
F
Sbjct: 101 F 101
>gi|38454252|ref|NP_942051.1| 28S ribosomal protein S18a, mitochondrial [Rattus norvegicus]
gi|37231675|gb|AAH58507.1| Mitochondrial ribosomal protein S18A [Rattus norvegicus]
gi|149069351|gb|EDM18792.1| mitochondrial ribosomal protein S18A, isoform CRA_d [Rattus
norvegicus]
Length = 196
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYEDVLLLSQFIRP-HGGMLPRRITGLCREEHRKMEECVKMAHRAG 126
Query: 170 LITFDLP 176
L P
Sbjct: 127 LFPNHRP 133
>gi|155372177|ref|NP_001094699.1| 28S ribosomal protein S18a, mitochondrial precursor [Bos taurus]
gi|182705281|sp|P82919.3|RT18A_BOVIN RecName: Full=28S ribosomal protein S18a, mitochondrial;
Short=MRP-S18-a; Short=Mrps18a; Short=S18mt-a; AltName:
Full=28S ribosomal protein S18-3, mitochondrial;
Short=MRP-S18-3; Flags: Precursor
gi|151554945|gb|AAI47967.1| MRPS18A protein [Bos taurus]
Length = 196
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYSYEDVLLLSQFIRP-HGGMLPRSITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|149732232|ref|XP_001502208.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like [Equus
caballus]
Length = 196
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYGYEDVLLLSQFIRP-HGGMLPRRITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|389579850|ref|ZP_10169877.1| ribosomal protein S18 [Desulfobacter postgatei 2ac9]
gi|389401485|gb|EIM63707.1| ribosomal protein S18 [Desulfobacter postgatei 2ac9]
Length = 85
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C D + I N K L+QFI+ G+I+ TG C K KL +AI QA+ L+
Sbjct: 20 CRFCVDSSMEIDYKNPKALKQFITE-RGKIIPRRITGTCAKHQRKLTIAIKQARQIALLP 78
Query: 173 F 173
F
Sbjct: 79 F 79
>gi|346468521|gb|AEO34105.1| hypothetical protein [Amblyomma maculatum]
Length = 180
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 109 TGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNK 168
T + CP+CR I+ ++ +L QF+ G +L TG+C KQH + + QA+
Sbjct: 75 TSSACPLCRLGLKKINHTDVLILSQFMDS-QGNMLPRDVTGLCFKQHRIVSALLYQAQRT 133
Query: 169 GLI 171
GLI
Sbjct: 134 GLI 136
>gi|301757332|ref|XP_002914507.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 196
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CP+CR + + H Y ++ LL QFI P G +L TG+CQ++H K+ + A G
Sbjct: 70 CPVCR--WNLKHKYGYEDVLLLSQFIRPCGG-LLPRRVTGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|268530714|ref|XP_002630483.1| Hypothetical protein CBG11219 [Caenorhabditis briggsae]
Length = 134
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N +LL+QF+S +G + TG+C +Q KL+ AI +++ G +
Sbjct: 62 NARLLQQFVSTFSGRVYDRHITGLCDEQQKKLIEAIAKSRRAGFM 106
>gi|114319037|gb|ABI63367.1| mitochondrial ribosomal protein S18A [Homo sapiens]
Length = 270
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
>gi|198433466|ref|XP_002128137.1| PREDICTED: similar to mitochondrial ribosomal protein S18A like
[Ciona intestinalis]
Length = 193
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CP+ R + I PY++ +L QFI+ G+ILS +TG+ +K++ K++ + A+ ++
Sbjct: 70 CPL-RSRGIHITPYDVLILNQFITS-EGDILSQAETGLSRKEYFKVIACVKMAQRANML 126
>gi|291396270|ref|XP_002714485.1| PREDICTED: mitochondrial ribosomal protein S18A [Oryctolagus
cuniculus]
Length = 196
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYTYEDVLLLSQFIRP-HGGMLPRKVTGLCQEEHRKVEECVKMAHRAG 126
Query: 170 LITFDLP 176
L P
Sbjct: 127 LFPNHRP 133
>gi|315925593|ref|ZP_07921803.1| 30S ribosomal protein S18 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621134|gb|EFV01105.1| 30S ribosomal protein S18 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 74
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C E +++ +I L+++IS G+IL TG C K K+ A+ +A+N L+
Sbjct: 12 CEFCEHEDMVVDYKDIATLKKYISE-RGKILPRRATGACAKHQRKITQAVNRARNMALLP 70
Query: 173 F 173
+
Sbjct: 71 Y 71
>gi|320109096|ref|YP_004184686.1| 30S ribosomal protein S18 [Terriglobus saanensis SP1PR4]
gi|319927617|gb|ADV84692.1| ribosomal protein S18 [Terriglobus saanensis SP1PR4]
Length = 127
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C ++ I +++LL+ F++ G+I+ TGVC +L +AI QA+N L+
Sbjct: 64 CKFCVEKIDQISYRDVRLLQGFVAE-RGKIVPRRLTGVCTTHQRQLSLAIKQARNIALLP 122
Query: 173 FDLPF 177
F F
Sbjct: 123 FAAKF 127
>gi|73972954|ref|XP_532152.2| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Canis lupus familiaris]
Length = 196
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYSYEDVLLLRQFIRP-RGGMLPRRITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L P
Sbjct: 127 LFPNHRP 133
>gi|126310092|ref|XP_001366285.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Monodelphis domestica]
Length = 196
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYEDVLLLSQFIRP-HGGMLPRRITGLCLEEHRKVAECVKMAHRAG 126
Query: 170 LI 171
L+
Sbjct: 127 LL 128
>gi|297713039|ref|XP_002833022.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Pongo abelii]
Length = 127
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
>gi|410959252|ref|XP_003986226.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1
[Felis catus]
Length = 196
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYGYEDVLLLSQFIRPCGG-MLPRRITGLCQEEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L P
Sbjct: 127 LFPNHRP 133
>gi|301069365|ref|NP_001180272.1| 28S ribosomal protein S18a, mitochondrial isoform 2 precursor [Homo
sapiens]
gi|119624630|gb|EAX04225.1| mitochondrial ribosomal protein S18A, isoform CRA_b [Homo sapiens]
gi|194374617|dbj|BAG62423.1| unnamed protein product [Homo sapiens]
Length = 127
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
>gi|332824155|ref|XP_003311365.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Pan
troglodytes]
Length = 127
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
>gi|304373311|ref|YP_003856520.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis HUB-1]
gi|304309502|gb|ADM21982.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis HUB-1]
Length = 80
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 112 PCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
PC C + + I N+++LE+F++P +G+I TG C K ++ +AI +A+ L+
Sbjct: 13 PCHFCETQTVYIDYKNVEVLEKFVNP-HGKIQPSRITGSCSKHQRQVSLAIKRARMIALM 71
Query: 172 TF 173
F
Sbjct: 72 AF 73
>gi|426353294|ref|XP_004044132.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Gorilla gorilla gorilla]
Length = 127
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCQEEHRKIEECVKMAHRAG 126
>gi|378835994|ref|YP_005205270.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis GDL-1]
gi|385858726|ref|YP_005905237.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis MCLD]
gi|423263128|ref|YP_007013153.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis SK76]
gi|330723815|gb|AEC46185.1| 30S ribosomal protein S18 [Mycoplasma hyorhinis MCLD]
gi|367460779|gb|AEX14302.1| ribosomal protein S18 [Mycoplasma hyorhinis GDL-1]
gi|422035665|gb|AFX74507.1| SSU ribosomal protein S18p [Mycoplasma hyorhinis SK76]
Length = 80
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 112 PCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
PC C + + I N+++LE+F++P +G+I TG C K ++ +AI +A+ L+
Sbjct: 13 PCHFCETQTVYIDYKNVEVLEKFVNP-HGKIQPSRITGSCSKHQRQVSLAIKRARMIALM 71
Query: 172 TF 173
F
Sbjct: 72 AF 73
>gi|341880024|gb|EGT35959.1| hypothetical protein CAEBREN_00555 [Caenorhabditis brenneri]
Length = 140
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N +LL+QF+S +G + TG+C +Q KL+ AI +++ G +
Sbjct: 68 NSRLLQQFVSTFSGRVYDRHITGLCDEQQKKLIEAIAKSRRAGFM 112
>gi|348532363|ref|XP_003453676.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Oreochromis niloticus]
Length = 130
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 78 EPVWKYYRRNHKGMFAPKKTRKTCIRSGIIATGNP-------CPICRDEYLIIHPYNIKL 130
+PV Y FA G++ NP C +C + + NI+L
Sbjct: 11 KPVLCRYGNTGVRSFAAAAGEAGRTEDGLVNMENPYREPQKGCVLCD---VTVDFKNIQL 67
Query: 131 LEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
L QFISP G I TG+C ++ ++ AI +A++ G ++
Sbjct: 68 LSQFISPHTGRIYGRHITGLCGRKQKEVSKAIKKAQSMGFMS 109
>gi|156402582|ref|XP_001639669.1| predicted protein [Nematostella vectensis]
gi|156226799|gb|EDO47606.1| predicted protein [Nematostella vectensis]
Length = 158
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYN 181
N++LL QFIS +G I + TG+C K+ ++ AI +A+ GL+ + E++
Sbjct: 98 NVRLLSQFISSHSGRIYNRRVTGLCDKKQKEITNAIKRARAIGLMPVTMKHPEFH 152
>gi|221110694|ref|XP_002155234.1| PREDICTED: 30S ribosomal protein S18-like [Hydra magnipapillata]
Length = 146
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYN 181
N++LL QF+SP G+I TG+C + +L I +A+ GL+ + + +Y+
Sbjct: 86 NVRLLSQFVSPHTGKIYGSRITGLCPNKQRELAQNIRRARKVGLMPVTMKYFDYH 140
>gi|417396893|gb|JAA45480.1| Putative 28s ribosomal protein s18a mitochondrial [Desmodus
rotundus]
Length = 197
Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 71 CPICR--WNLKHKYCYEDVLLLSQFIRP-HGGMLPRRVTGLCREEHRKIEECVKMAHRAG 127
Query: 170 LI 171
L+
Sbjct: 128 LL 129
>gi|94971562|ref|YP_593610.1| 30S ribosomal protein S18 [Candidatus Koribacter versatilis
Ellin345]
gi|123079320|sp|Q1IHW4.1|RS18_ACIBL RecName: Full=30S ribosomal protein S18
gi|94553612|gb|ABF43536.1| SSU ribosomal protein S18P [Candidatus Koribacter versatilis
Ellin345]
Length = 123
Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C ++ I +++LL QF++ +G+I+ TGVC +L AI QA+N L+
Sbjct: 60 CKFCVEKIDAIDYKDVRLLGQFVAE-SGKIVPRRLTGVCTPHQRRLSDAIKQARNIALLP 118
Query: 173 F 173
F
Sbjct: 119 F 119
>gi|148691523|gb|EDL23470.1| mitochondrial ribosomal protein S18A, isoform CRA_c [Mus musculus]
Length = 183
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+C+++H K+ + A G
Sbjct: 57 CPICR--WNLKHKYTYEDVLLLSQFIRPYGG-MLPRRVTGLCREEHRKIEECVKMAHRAG 113
Query: 170 LITFDLP 176
L+ P
Sbjct: 114 LLPNHRP 120
>gi|24212196|sp|Q99N85.1|RT18A_MOUSE RecName: Full=28S ribosomal protein S18a, mitochondrial;
Short=MRP-S18-a; Short=Mrps18a; Short=S18mt-a; AltName:
Full=28S ribosomal protein S18-3, mitochondrial;
Short=MRP-S18-3; Flags: Precursor
gi|13620907|dbj|BAB41006.1| mitochondrial ribosomal protein S18a [Mus musculus]
Length = 196
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYTYEDVLLLSQFIRPYGG-MLPRRVTGLCREEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|331268135|ref|YP_004347784.1| ribosomal protein S18 [Chlorella variabilis]
gi|325296312|gb|ADZ05032.1| ribosomal protein S18 [Chlorella variabilis]
Length = 105
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 108 ATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKN 167
+T P P +Y N KLL +FISP G+ILS TG+ KQ + AI +A+
Sbjct: 35 STTQPAPRYTIDY-----KNTKLLVKFISP-QGKILSRRATGLTAKQQRVMANAIKRARM 88
Query: 168 KGLITFDLPFREY 180
GL LPF Y
Sbjct: 89 GGL----LPFVNY 97
>gi|17505206|ref|NP_081044.1| 28S ribosomal protein S18a, mitochondrial precursor [Mus musculus]
gi|12834120|dbj|BAB22794.1| unnamed protein product [Mus musculus]
gi|26389998|dbj|BAC25825.1| unnamed protein product [Mus musculus]
gi|37748383|gb|AAH58959.1| Mitochondrial ribosomal protein S18A [Mus musculus]
gi|74182479|dbj|BAE42864.1| unnamed protein product [Mus musculus]
gi|148691524|gb|EDL23471.1| mitochondrial ribosomal protein S18A, isoform CRA_d [Mus musculus]
Length = 196
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYTYEDVLLLSQFIRPYGG-MLPRRVTGLCREEHRKIEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|58037129|ref|NP_081102.1| 28S ribosomal protein S18c, mitochondrial [Mus musculus]
gi|24212186|sp|Q8R2L5.1|RT18C_MOUSE RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|20306712|gb|AAH28442.1| Mitochondrial ribosomal protein S18C [Mus musculus]
gi|74219265|dbj|BAE26766.1| unnamed protein product [Mus musculus]
gi|148688329|gb|EDL20276.1| mitochondrial ribosomal protein S18C, isoform CRA_c [Mus musculus]
Length = 143
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGFM 121
>gi|148688327|gb|EDL20274.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Mus musculus]
gi|148688328|gb|EDL20275.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Mus musculus]
Length = 89
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 23 NVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGFM 67
>gi|19343853|gb|AAH25456.1| Mrps18a protein, partial [Mus musculus]
Length = 132
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+C+++H K+ + A G
Sbjct: 6 CPICR--WNLKHKYTYEDVLLLSQFIRPYGG-MLPRRVTGLCREEHRKIEECVKMAHRAG 62
Query: 170 LITFDLP 176
L+ P
Sbjct: 63 LLPNHRP 69
>gi|354507738|ref|XP_003515911.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Cricetulus griseus]
Length = 141
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
NI+LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 75 NIQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQKMGFM 119
>gi|148691521|gb|EDL23468.1| mitochondrial ribosomal protein S18A, isoform CRA_a [Mus musculus]
Length = 149
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYTYEDVLLLSQFIRPYGG-MLPRRVTGLCREEHRKIEECVKMAHRAG 126
Query: 170 LI 171
L+
Sbjct: 127 LL 128
>gi|12835208|dbj|BAB23188.1| unnamed protein product [Mus musculus]
Length = 143
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMGFM 121
>gi|327289157|ref|XP_003229291.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like [Anolis
carolinensis]
Length = 192
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI +G +L TG+C +H K+ + + A G
Sbjct: 65 CPICR--WNLKHKYNFEDVLLLSQFIRS-DGGMLPRRVTGLCTVEHKKIAICVQMAHRAG 121
Query: 170 LI 171
L+
Sbjct: 122 LL 123
>gi|344258523|gb|EGW14627.1| 28S ribosomal protein S18c, mitochondrial [Cricetulus griseus]
Length = 89
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
NI+LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 23 NIQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQKMGFM 67
>gi|313226025|emb|CBY21168.1| unnamed protein product [Oikopleura dioica]
Length = 305
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 89 KGMFAPKKTRKTCIRSGIIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKT 148
+G+ + ++ R+ + PCP+ + + P ++ +L QFI +G +LS +T
Sbjct: 100 EGILSDEEKREPLMLEEFEKPTRPCPL-ESRKISVTPKDVLILAQFIKK-DGTLLSQAQT 157
Query: 149 GVCQKQHLKLLVAITQAKNKGLITFDLPFREYNY 182
G+ +Q+ + A+ A+N GL LP+ +++Y
Sbjct: 158 GLSDRQYEVVKDAVKIAQNDGL----LPYSKFSY 187
>gi|406913831|gb|EKD53146.1| hypothetical protein ACD_61C00140G0004 [uncultured bacterium]
Length = 76
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 106 IIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQA 165
I + PCP C + ++ ++++ L ISP I+S TGVC+K L+L AI +A
Sbjct: 7 IRKSNKPCPFCVKKAEPVY-FDLESLAVGISP-KKRIVSRWTTGVCEKHQLRLARAIKRA 64
Query: 166 KNKGLITF 173
++ L+ F
Sbjct: 65 RHLALLPF 72
>gi|157822015|ref|NP_001099466.1| 28S ribosomal protein S18c, mitochondrial [Rattus norvegicus]
gi|149046775|gb|EDL99549.1| mitochondrial ribosomal protein S18C (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 143
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEVTKAIKRAQKMGFM 121
>gi|313679095|ref|YP_004056834.1| 30S ribosomal protein s18 [Oceanithermus profundus DSM 14977]
gi|313151810|gb|ADR35661.1| SSU ribosomal protein S18P [Oceanithermus profundus DSM 14977]
Length = 84
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C E I + K+L++FIS G+IL +TGVC K +L I +A+ +I
Sbjct: 18 CQFCTGELEITDYKDAKMLKRFISE-TGKILPRRRTGVCAKHQRRLATTIKRARILAIIP 76
Query: 173 F 173
F
Sbjct: 77 F 77
>gi|307176792|gb|EFN66189.1| 28S ribosomal protein S18c, mitochondrial [Camponotus floridanus]
Length = 146
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 113 CPICRDEYLIIHP--YNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGL 170
C +CR L I P N++LL QF S G I TG+C+ + KL I +A++ GL
Sbjct: 62 CILCR---LNIEPDYKNVRLLSQFQSQHTGRIYESHITGLCKYKQKKLEEEINKARSAGL 118
Query: 171 ITF 173
+ F
Sbjct: 119 MGF 121
>gi|426250351|ref|XP_004018900.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Ovis aries]
Length = 127
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYSYEDVLLLSQFIRP-HGGMLPRRVTGLCQEEHRKIEECVKMAHRAG 126
>gi|225704940|gb|ACO08316.1| 28S ribosomal protein S18c, mitochondrial precursor [Oncorhynchus
mykiss]
Length = 102
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
N++LL QFISP G + TG+C K+ ++ AI +A + G ++
Sbjct: 36 NVQLLSQFISPHTGRVYGRHITGLCGKKQREIAKAIKKAHSMGFMS 81
>gi|350537741|ref|NP_001232301.1| putative mitochondrial ribosomal protein S18A [Taeniopygia guttata]
gi|197128057|gb|ACH44555.1| putative mitochondrial ribosomal protein S18A [Taeniopygia guttata]
gi|197128058|gb|ACH44556.1| putative mitochondrial ribosomal protein S18A [Taeniopygia guttata]
Length = 190
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y+ + LL QFI +G +L TG+C ++H K+ V + A G
Sbjct: 65 CPICR--WNLKHKYDYVDVLLLSQFIR-SDGGMLPRRVTGLCLEEHKKVAVCVQMAHRAG 121
Query: 170 LI 171
L+
Sbjct: 122 LL 123
>gi|449673649|ref|XP_002163436.2| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like [Hydra
magnipapillata]
Length = 148
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CP+C + ++ L QF++P G +++ TGVC+KQ + + AI A+ +GL+
Sbjct: 62 CPVC-SRGISFKVDDVLFLSQFLTP-EGHMMNRRVTGVCKKQQVAIFKAIHIARRQGLL 118
>gi|7524804|ref|NP_045806.1| ribosomal protein S18 [Chlorella vulgaris]
gi|3024563|sp|P56353.1|RR18_CHLVU RecName: Full=30S ribosomal protein S18, chloroplastic
gi|2224397|dbj|BAA57881.1| 30S ribosomal protein S18 [Chlorella vulgaris]
Length = 103
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 109 TGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNK 168
TG P Y+I + N +LL +FISP G+ILS TG+ KQ + AI +A+
Sbjct: 36 TGEPA----SRYIIDYK-NTQLLVKFISP-QGKILSRRATGLTAKQQRIMANAIKRARMG 89
Query: 169 GLITF 173
GL+ F
Sbjct: 90 GLVPF 94
>gi|301753317|ref|XP_002912508.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Ailuropoda melanoleuca]
gi|281346798|gb|EFB22382.1| hypothetical protein PANDA_000252 [Ailuropoda melanoleuca]
Length = 143
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ GL+
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGLM 121
>gi|158293563|ref|XP_314899.3| AGAP008773-PA [Anopheles gambiae str. PEST]
gi|157016769|gb|EAA10088.3| AGAP008773-PA [Anopheles gambiae str. PEST]
Length = 148
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QF SP G + TG+C+ +H ++ I +A+N G +
Sbjct: 77 NVQLLSQFQSPYTGRVYGRNITGLCKNRHEQVEREIIKAQNAGFM 121
>gi|149046776|gb|EDL99550.1| mitochondrial ribosomal protein S18C (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 89
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 23 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEVTKAIKRAQKMGFM 67
>gi|374301520|ref|YP_005053159.1| 30S ribosomal protein S18 [Desulfovibrio africanus str. Walvis Bay]
gi|332554456|gb|EGJ51500.1| 30S ribosomal protein S18 [Desulfovibrio africanus str. Walvis Bay]
Length = 86
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C D+ + I N LL FI+ G+I++ TG C K +L AI +++ L+
Sbjct: 14 CRFCADKNVAIDYKNADLLRDFITD-RGKIIARRITGTCAKHQRRLTTAIKRSRQMALLF 72
Query: 173 FDLPFREY 180
+ Y
Sbjct: 73 YTTTHATY 80
>gi|221222110|gb|ACM09716.1| 28S ribosomal protein S18c, mitochondrial precursor [Salmo salar]
Length = 138
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C +C + + N++LL QFISP G I TG+C K+ ++ AI +A + G ++
Sbjct: 61 CILCN---ITVDFKNVQLLSQFISPHTGRIYGRHITGLCGKKQREIGKAIKKAHSMGFMS 117
>gi|332234155|ref|XP_003266276.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 3
[Nomascus leucogenys]
Length = 127
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H YN + LL QFI P +G +L TG+C+++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYNYDDVLLLSQFIRP-HGGMLPRKITGLCREEHRKIEECVKMAHRAG 126
>gi|148540187|ref|NP_001038655.2| 28S ribosomal protein S18c, mitochondrial [Danio rerio]
gi|133778758|gb|AAI34081.1| Mrps18c protein [Danio rerio]
Length = 136
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDL 175
N++LL QFISP G I TG+C ++ ++ AI ++++ G ++ L
Sbjct: 70 NVQLLSQFISPHTGRIYGRHITGLCGRKQKEVTKAIKKSRSMGFMSVTL 118
>gi|449283227|gb|EMC89908.1| 28S ribosomal protein S18a, mitochondrial, partial [Columba livia]
Length = 146
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y+ + LL QFI +G +L TG+C ++H K+ V + A G
Sbjct: 21 CPICR--WNLKHKYDYVDVLLLSQFIR-SDGGMLPRRITGLCLEEHKKIAVCVQMAHRAG 77
Query: 170 LITFDLP 176
L+ P
Sbjct: 78 LLPNHRP 84
>gi|258405219|ref|YP_003197961.1| 30S ribosomal protein S18 [Desulfohalobium retbaense DSM 5692]
gi|257797446|gb|ACV68383.1| ribosomal protein S18 [Desulfohalobium retbaense DSM 5692]
Length = 86
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
C C+D L + NI+LL+ F++ G+I++ TG C K +L I +A+ L+
Sbjct: 14 CRFCQDNELNLDYKNIELLQDFVTA-RGKIIARRITGTCAKHQRQLTREIKRARQMALL 71
>gi|221220090|gb|ACM08706.1| 28S ribosomal protein S18c, mitochondrial precursor [Salmo salar]
Length = 132
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
N++LL QFISP G I TG+C K+ ++ AI +A + G ++
Sbjct: 66 NVQLLSQFISPHTGRIYGRHITGLCGKKQREIGKAIKKAHSMGFMS 111
>gi|410959254|ref|XP_003986227.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 2
[Felis catus]
Length = 127
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYGYEDVLLLSQFIRPCGG-MLPRRITGLCQEEHRKIEECVKMAHRAG 126
>gi|440902442|gb|ELR53234.1| 28S ribosomal protein S18a, mitochondrial [Bos grunniens mutus]
Length = 268
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P +G +L TG+CQ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYSYEDVLLLSQFIRP-HGGMLPRSITGLCQEEHRKIEECVKMAHRAG 126
>gi|427784799|gb|JAA57851.1| Putative 28s ribosomal protein s18a [Rhipicephalus pulchellus]
Length = 171
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 109 TGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNK 168
T + CP+CR ++ ++ +L QF+ G L TG+C KQH + + QA+
Sbjct: 66 TSSACPLCRLGLKRLNHTDVLILSQFMDS-RGNQLPRNVTGLCAKQHKIVGTLLYQAQRT 124
Query: 169 GLI 171
GLI
Sbjct: 125 GLI 127
>gi|226489048|emb|CAX74873.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489050|emb|CAX74874.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489052|emb|CAX74875.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
gi|226489054|emb|CAX74876.1| putative 28S ribosomal protein S18c, mitochondrial precursor
[Schistosoma japonicum]
Length = 142
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFD 174
N++LL QF+SP G I TG+C ++ IT+++ G + F+
Sbjct: 76 NVRLLSQFVSPYTGRIYGRHITGMCIPMQKRISQLITRSRQFGFMPFE 123
>gi|328873431|gb|EGG21798.1| hypothetical protein DFA_01684 [Dictyostelium fasciculatum]
Length = 852
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 104 SGIIATGNP----CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLL 159
+G TGNP C +C D + P N+ LL +++ G+IL TG C K +L
Sbjct: 671 TGKEVTGNPKFPKCLLCYDFGWRVEPLNVPLLSIYMN-TEGDILPRYITGNCLKHQKRLA 729
Query: 160 VAITQAKNKGLITF 173
I AK+ G ++
Sbjct: 730 RNIKAAKHLGFFSY 743
>gi|408419734|ref|YP_006761148.1| 30S ribosomal protein S18 RpsR [Desulfobacula toluolica Tol2]
gi|405106947|emb|CCK80444.1| RpsR: 30S ribosomal protein S18 [Desulfobacula toluolica Tol2]
Length = 87
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C D L I K L QFI+ G+I+ TG C K +L VA+ QA+ L+
Sbjct: 22 CRFCVDNDLEIDYKTPKALRQFITE-RGKIIPRRITGTCAKHQRQLTVAVKQARQIALLP 80
Query: 173 F 173
F
Sbjct: 81 F 81
>gi|410904056|ref|XP_003965509.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Takifugu
rubripes]
Length = 89
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
NI+LL QFISP G I + TG+C + ++ AI +A++ G ++
Sbjct: 23 NIQLLSQFISPHTGHIYARHFTGLCGVKQKQVAKAIKKAQSMGFMS 68
>gi|395542183|ref|XP_003773014.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Sarcophilus
harrisii]
Length = 127
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 63 NVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQIMGFM 107
>gi|443682441|gb|ELT87032.1| hypothetical protein CAPTEDRAFT_164978 [Capitella teleta]
Length = 97
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITF 173
N KLL QFISP G+I TG+C ++ + I +++N G +++
Sbjct: 30 NAKLLSQFISPHTGQIYGRGVTGLCLYMQKRVALNIKRSRNFGYMSY 76
>gi|324520262|gb|ADY47595.1| 28S ribosomal protein S18c [Ascaris suum]
Length = 137
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
N +LL+QF+S +G + TG+C+ Q KL+ I ++ G
Sbjct: 65 NARLLQQFVSSFSGRVYDRHVTGLCEHQQKKLVATIALSRRAG 107
>gi|355704423|gb|AES02222.1| mitochondrial ribosomal protein S18A [Mustela putorius furo]
Length = 195
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI P+ G +L TG+C +H K+ + A G
Sbjct: 70 CPICR--WNLKHKYGYEDVLLLSQFIRPLGG-MLPRRITGLCLGEHRKIEECVKMAHRAG 126
Query: 170 LI 171
L
Sbjct: 127 LF 128
>gi|254798679|ref|YP_003058300.1| ribosomal protein S18 [Parachlorella kessleri]
gi|229915627|gb|ACQ90970.1| ribosomal protein S18 [Parachlorella kessleri]
Length = 105
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITF 173
N KLL +FISP G+IL TG+ KQ + AI +A+ GL+ F
Sbjct: 49 NTKLLVKFISP-QGKILPRRATGLTAKQQRSMANAIKRARMSGLLPF 94
>gi|26353262|dbj|BAC40261.1| unnamed protein product [Mus musculus]
gi|148688326|gb|EDL20273.1| mitochondrial ribosomal protein S18C, isoform CRA_a [Mus musculus]
Length = 128
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
N++LL QFISP G I TG+C K+ ++ AI +A+ G
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQKMG 119
>gi|326915357|ref|XP_003203985.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like
[Meleagris gallopavo]
Length = 190
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y+ + LL QFI +G +L TG+C ++H K+ + A G
Sbjct: 65 CPICR--WNLKHKYDYVDVLLLSQFIR-SDGGMLPRRITGLCLEEHKKIAACVQMAHRAG 121
Query: 170 LITFDLPF 177
L+ P
Sbjct: 122 LLPNHRPL 129
>gi|338723390|ref|XP_003364714.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Equus
caballus]
Length = 142
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N++LL QFISP G I TG+C K+ ++ AI +A+ G F YKD
Sbjct: 76 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMG-------FMPVTYKD 126
>gi|57109098|ref|XP_535635.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial isoform 1
[Canis lupus familiaris]
Length = 143
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N++LL QFISP G I TG+C K+ ++ AI +A+ G F YKD
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMG-------FMPVTYKD 127
>gi|114050735|ref|NP_001039973.1| 28S ribosomal protein S18c, mitochondrial [Bos taurus]
gi|108935898|sp|P82917.2|RT18C_BOVIN RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|86827491|gb|AAI12819.1| Mitochondrial ribosomal protein S18C [Bos taurus]
gi|296486363|tpg|DAA28476.1| TPA: 28S ribosomal protein S18c, mitochondrial precursor [Bos
taurus]
gi|440896671|gb|ELR48538.1| 28S ribosomal protein S18c, mitochondrial [Bos grunniens mutus]
Length = 143
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQREITKAIKRAQILGFM 121
>gi|410957305|ref|XP_003985270.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Felis catus]
Length = 143
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFM 121
>gi|348576220|ref|XP_003473885.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial-like [Cavia
porcellus]
Length = 196
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QF+ P +G +L TG+C ++H K+ + A G
Sbjct: 70 CPICR--WNLKHKYSYEDVLLLSQFLRP-HGGMLPRSVTGLCLEEHRKVEECVKMAHRAG 126
Query: 170 LITFDLP 176
L+ P
Sbjct: 127 LLPNHRP 133
>gi|118088000|ref|XP_001234387.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial isoform 1
[Gallus gallus]
Length = 144
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 113 CPICRDEYLIIHPYN---IKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y+ + LL QFI +G +L TG+C ++H K+ + A G
Sbjct: 65 CPICR--WNLKHKYDYVDVLLLSQFIR-SDGGMLPRRITGLCLEEHKKIAACVQMAHRAG 121
Query: 170 LITFDLPF 177
L+ P
Sbjct: 122 LLPNHRPL 129
>gi|431916151|gb|ELK16403.1| 28S ribosomal protein S18c, mitochondrial [Pteropus alecto]
Length = 143
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFM 121
>gi|395834167|ref|XP_003790083.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Otolemur
garnettii]
Length = 142
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N++LL QFISP G I TG+C K+ ++ AI +A+ G F YKD
Sbjct: 76 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMG-------FMPVTYKD 126
>gi|426231980|ref|XP_004010014.1| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S18c,
mitochondrial [Ovis aries]
Length = 142
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 76 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQILGFM 120
>gi|406913524|gb|EKD52901.1| ribosomal protein S18 [uncultured bacterium]
Length = 76
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 106 IIATGNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQA 165
I + PCP C + ++ +++ L ISP I+S TGVC+K L+L AI +A
Sbjct: 7 IRKSNKPCPFCVKKTEPVYS-DLESLSVGISP-KKRIVSRWTTGVCEKHQLRLARAIKRA 64
Query: 166 KNKGLITF 173
++ L+ F
Sbjct: 65 RHLALLPF 72
>gi|206889919|ref|YP_002248636.1| ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741857|gb|ACI20914.1| ribosomal protein S18 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 77
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
C C ++ I N+KLL F++ G+ILS TG C K +L AI +A+ L+
Sbjct: 15 CRFCAEKIDFIDYKNVKLLRGFMTE-RGKILSRKLTGTCSKHQRELTKAIKRARAVALL 72
>gi|47210459|emb|CAF94328.1| unnamed protein product [Tetraodon nigroviridis]
Length = 128
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
NI+LL QFISP G+I TG+C + ++ AI +A++ G ++
Sbjct: 64 NIQLLSQFISPHTGKIYGRHFTGLCGVKQKQVAKAIKKAQSMGFMS 109
>gi|335294152|ref|XP_003129404.2| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S18c,
mitochondrial-like [Sus scrofa]
Length = 143
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I TG+C K+ ++ AI +A+ G +
Sbjct: 77 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQILGFM 121
>gi|395534194|ref|XP_003769132.1| PREDICTED: 28S ribosomal protein S18a, mitochondrial [Sarcophilus
harrisii]
Length = 196
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 113 CPICRDEYLIIHPY-NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CPICR + Y ++ LL QFI P +G +L TG+C ++H K+ + A GL+
Sbjct: 70 CPICRWNLKYKYNYTDVLLLSQFIRP-HGGMLPRRITGLCLEEHRKVEECVKMAHRSGLL 128
Query: 172 TFDLP 176
P
Sbjct: 129 PNHRP 133
>gi|195452704|ref|XP_002073463.1| GK14131 [Drosophila willistoni]
gi|194169548|gb|EDW84449.1| GK14131 [Drosophila willistoni]
Length = 143
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 113 CPICRDEYLIIHPY--NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAK 166
C +C+ IHP+ N+KLL QF SP G I TG+C+++ + AI +A+
Sbjct: 59 CILCKHN---IHPHYKNVKLLSQFQSPYTGRIYGRHITGLCKQKQEDVEKAILRAQ 111
>gi|42520621|ref|NP_966536.1| 30S ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58698590|ref|ZP_00373488.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|99034686|ref|ZP_01314626.1| hypothetical protein Wendoof_01000557 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630395|ref|YP_002727186.1| ribosomal protein S18 [Wolbachia sp. wRi]
gi|59798787|sp|Q73GZ6.1|RS18_WOLPM RecName: Full=30S ribosomal protein S18
gi|254812966|sp|C0R3A3.1|RS18_WOLWR RecName: Full=30S ribosomal protein S18
gi|42410360|gb|AAS14470.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58534886|gb|EAL58987.1| ribosomal protein S18 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592376|gb|ACN95395.1| ribosomal protein S18 [Wolbachia sp. wRi]
Length = 91
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CP+ + I NI LL +F S G IL TGVC K+ KL +AI +A+ LI
Sbjct: 27 CPLAASKDEDIDYKNIDLLSKFTSDY-GRILPRRLTGVCAKKQRKLRLAIIRARFLALI 84
>gi|356640150|ref|NP_001239240.1| mitochondrial ribosomal protein S18C [Gallus gallus]
Length = 144
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QF+SP G I TG+C K+ ++ AI +A G +
Sbjct: 80 NVQLLSQFVSPYTGRIYGRHITGLCNKKQKEISKAIKRAHILGFM 124
>gi|332018576|gb|EGI59161.1| 28S ribosomal protein S18a, mitochondrial [Acromyrmex echinatior]
Length = 134
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 110 GNPCPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
N CP+C + H ++ +L QF+ NG +L TG+C Q K+ + +T AK G
Sbjct: 64 SNACPLCATGLDVKHT-DVLILNQFLRK-NGTMLPRRVTGLCMMQQNKVTILVTMAKRAG 121
>gi|344284805|ref|XP_003414155.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Loxodonta africana]
Length = 144
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N++LL QFISP G I TG+C K+ ++ AI +A+ G F YKD
Sbjct: 78 NVQLLSQFISPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMG-------FMPVTYKD 128
>gi|321466269|gb|EFX77265.1| hypothetical protein DAPPUDRAFT_305829 [Daphnia pulex]
Length = 143
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N +LL QF+SP G++ TG+C+ + + I +A+N G + L EY +KD
Sbjct: 72 NARLLSQFLSPFTGKVYERNITGLCKSKQKIVESEIIKAQNAGYLAIMLKKVEY-FKD 128
>gi|227824505|ref|ZP_03989337.1| 30S ribosomal protein S18 [Acidaminococcus sp. D21]
gi|352683567|ref|YP_004895551.1| 30S ribosomal protein S18 [Acidaminococcus intestini RyC-MR95]
gi|226905004|gb|EEH90922.1| 30S ribosomal protein S18 [Acidaminococcus sp. D21]
gi|350278221|gb|AEQ21411.1| 30S ribosomal protein S18 [Acidaminococcus intestini RyC-MR95]
Length = 79
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C D+ I ++ L +FI+ G+IL TG C K +L +AI +A+N L+
Sbjct: 17 CSFCVDKVEEIDYKDVAKLRKFITE-RGKILPRRITGTCAKHQRQLTIAIKRARNVALLP 75
Query: 173 F 173
F
Sbjct: 76 F 76
>gi|357613436|gb|EHJ68500.1| mitochondrial 28S ribosomal protein S18c [Danaus plexippus]
Length = 135
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 17/81 (20%)
Query: 95 KKTRKTCIRSGIIATGNPCPICRDEYLIIHP--YNIKLLEQFISPVNGEILSYMKTGVCQ 152
KK RK CI +C+ L I P N +LL QF SP G I TG+C+
Sbjct: 45 KKERKQCI------------LCK---LNIRPDYKNYRLLSQFQSPYTGRIYGRHITGLCK 89
Query: 153 KQHLKLLVAITQAKNKGLITF 173
+ + IT+A+N G + +
Sbjct: 90 AKQALVDSEITKAQNSGYMPY 110
>gi|326918710|ref|XP_003205631.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Meleagris gallopavo]
Length = 109
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QF+SP +G I TG+C K+ ++ AI +A G +
Sbjct: 45 NVQLLSQFVSPYSGRIYGRHITGLCDKKQKEISKAIKRAHILGFM 89
>gi|449499808|ref|XP_004176331.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Taeniopygia
guttata]
Length = 135
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QF+SP G I TG+C K+ ++ AI +A G +
Sbjct: 69 NVQLLSQFVSPYTGSIYGRHITGLCNKKQKEITKAIKRAHVFGFM 113
>gi|126331100|ref|XP_001371066.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Monodelphis domestica]
Length = 171
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGL--ITFDLP 176
N++LL QF+SP G I TG+C K+ ++ AI +A+ G +TF P
Sbjct: 107 NVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVTFKDP 158
>gi|406705880|ref|YP_006756233.1| 30S ribosomal protein S18 [alpha proteobacterium HIMB5]
gi|406651656|gb|AFS47056.1| SSU ribosomal protein S18P [alpha proteobacterium HIMB5]
Length = 89
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CP+ + I NIKLL +++S NG+IL T V QK+ +L ++I +A+N L+
Sbjct: 32 CPLSVKDAPKIDYKNIKLLRRYVSE-NGKILPSRITNVSQKKQRELSLSIKRARNLALL 89
>gi|392530713|ref|ZP_10277850.1| 30S ribosomal protein S18 [Carnobacterium maltaromaticum ATCC
35586]
gi|414082111|ref|YP_006990808.1| 30S ribosomal protein S18 [Carnobacterium maltaromaticum LMA28]
gi|412995684|emb|CCO09493.1| ribosomal protein S18 [Carnobacterium maltaromaticum LMA28]
Length = 78
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITF 173
+++LL++F+S G+IL TG C K KL +AI +A+ GL+ F
Sbjct: 29 DVELLKRFVSE-RGKILPRRVTGTCAKHQRKLTIAIKRARIMGLLPF 74
>gi|313884313|ref|ZP_07818076.1| ribosomal protein S18 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620466|gb|EFR31892.1| ribosomal protein S18 [Eremococcus coleocola ACS-139-V-Col8]
Length = 77
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 113 CPICRDEYLIIHP--YNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGL 170
C C + I HP +++LL++FIS G+IL TG C K L +AI +A+ GL
Sbjct: 14 CYFCANH--IDHPDYKDVELLQRFISD-KGKILPRRVTGTCAKHQRALTIAIKRARIMGL 70
Query: 171 ITF 173
+ F
Sbjct: 71 LPF 73
>gi|147905850|ref|NP_001090044.1| mitochondrial ribosomal protein S18A [Xenopus laevis]
gi|66911557|gb|AAH97747.1| MGC115435 protein [Xenopus laevis]
Length = 195
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 113 CPICRDEYLIIHPY---NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKG 169
CPICR + + H Y ++ LL QFI +G +L TG+C ++H K+ + A G
Sbjct: 69 CPICR--WNLKHKYTYTDVLLLSQFIRS-DGGMLPRRVTGLCMEEHRKVETCVKMAHRAG 125
Query: 170 LI 171
L+
Sbjct: 126 LL 127
>gi|340373821|ref|XP_003385438.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like
[Amphimedon queenslandica]
Length = 122
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 107 IATG-NPCP---ICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAI 162
I+ G N CP +C + LI + N++LL QF+S G + T +C K+ +L AI
Sbjct: 39 ISNGVNDCPKSCLCSNGILIDYK-NVQLLSQFVSSQTGMMYPRTYTKICMKKQKQLARAI 97
Query: 163 TQAKNKGLITFDLPFREY 180
+++ G + + EY
Sbjct: 98 KRSRTMGFMPYTYKIPEY 115
>gi|195055805|ref|XP_001994803.1| GH14032 [Drosophila grimshawi]
gi|193892566|gb|EDV91432.1| GH14032 [Drosophila grimshawi]
Length = 357
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKN 167
C +C+ ++ H N+KLL QF SP G I TG+C+++ + AI +A++
Sbjct: 273 CILCKHN-IVPHYKNVKLLSQFQSPYTGRIYGRHITGLCKQKQEHVEQAILRAQH 326
>gi|332233407|ref|XP_003265893.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial isoform 1
[Nomascus leucogenys]
Length = 144
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QF+SP G I TG+C K+ ++ AI +A+ G +
Sbjct: 78 NVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFM 122
>gi|297673900|ref|XP_002814984.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pongo abelii]
Length = 144
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N++LL QF+SP G I TG+C K+ ++ AI +A+ G F YKD
Sbjct: 78 NVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMG-------FMPVTYKD 128
>gi|71834394|ref|NP_001025285.1| 28S ribosomal protein S18a, mitochondrial [Danio rerio]
Length = 210
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 93 APKKTRKTCIRSGIIATG-------NP---CPICRDEYLIIHPYN---IKLLEQFISPVN 139
A KK KT I G I T NP CPI R + + + YN + LL QFI +
Sbjct: 52 AEKKEGKTTIIEGFIETTTEQPQPPNPTASCPIYR--WNLQNKYNYTDVLLLSQFIRS-D 108
Query: 140 GEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
G +L TG+C ++H K+ + + A GL+
Sbjct: 109 GGLLPRRITGLCAQEHNKIAICVQMAHRAGLL 140
>gi|225677181|ref|ZP_03788177.1| ribosomal protein S18 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590768|gb|EEH11999.1| ribosomal protein S18 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 91
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
CP+ + + NI LL +F S G IL TGVC K+ KL +AI +A+ LI
Sbjct: 27 CPLAASKDEDVDYKNIDLLSKFTSDY-GRILPRRLTGVCAKKQRKLRLAIIRARFLALI 84
>gi|7705630|ref|NP_057151.1| 28S ribosomal protein S18c, mitochondrial [Homo sapiens]
gi|55622668|ref|XP_517249.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial isoform 2 [Pan
troglodytes]
gi|397524628|ref|XP_003832291.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial [Pan paniscus]
gi|24212202|sp|Q9Y3D5.1|RT18C_HUMAN RecName: Full=28S ribosomal protein S18c, mitochondrial;
Short=MRP-S18-c; Short=Mrps18-c; Short=S18mt-c; AltName:
Full=28S ribosomal protein S18-1, mitochondrial;
Short=MRP-S18-1; Flags: Precursor
gi|4929737|gb|AAD34129.1|AF151892_1 CGI-134 protein [Homo sapiens]
gi|13528768|gb|AAH05186.1| Mitochondrial ribosomal protein S18C [Homo sapiens]
gi|119626343|gb|EAX05938.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Homo sapiens]
gi|119626345|gb|EAX05940.1| mitochondrial ribosomal protein S18C, isoform CRA_b [Homo sapiens]
gi|312150164|gb|ADQ31594.1| mitochondrial ribosomal protein S18C [synthetic construct]
Length = 142
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLITFDLPFREYNYKD 184
N++LL QF+SP G I TG+C K+ ++ AI +A+ G F YKD
Sbjct: 76 NVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMG-------FMPVTYKD 126
>gi|319789282|ref|YP_004150915.1| ribosomal protein S18 [Thermovibrio ammonificans HB-1]
gi|317113784|gb|ADU96274.1| ribosomal protein S18 [Thermovibrio ammonificans HB-1]
Length = 80
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C ++ I N++LL+ FIS G I+ +GVC K +L A+ +A++ L+
Sbjct: 17 CKFCAEKIERIDYKNVELLKSFISE-RGRIIPRRISGVCSKHQRQLARAVKRARHLALLP 75
Query: 173 F 173
F
Sbjct: 76 F 76
>gi|259047889|ref|ZP_05738290.1| 30S ribosomal protein S18 [Granulicatella adiacens ATCC 49175]
gi|259035566|gb|EEW36821.1| 30S ribosomal protein S18 [Granulicatella adiacens ATCC 49175]
Length = 80
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 113 CPICRDEYLIIHPYNIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLIT 172
C C + I +++LL+++IS G+IL TG C K L VAI +A+ GL+
Sbjct: 17 CYFCANHVDYIDYKDVELLKRYISE-KGKILPRRVTGTCAKHQRTLTVAIKRARIMGLLP 75
Query: 173 F 173
F
Sbjct: 76 F 76
>gi|297295998|ref|XP_002804733.1| PREDICTED: 28S ribosomal protein S18c, mitochondrial-like [Macaca
mulatta]
Length = 144
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 127 NIKLLEQFISPVNGEILSYMKTGVCQKQHLKLLVAITQAKNKGLI 171
N++LL QFISP G I KTG+C K+ ++ AI + + GL+
Sbjct: 78 NVQLLSQFISPFIGCICGRHKTGLCGKKQKEITKAIKRPQIIGLM 122
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,326,624,216
Number of Sequences: 23463169
Number of extensions: 140221778
Number of successful extensions: 271218
Number of sequences better than 100.0: 290
Number of HSP's better than 100.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 270950
Number of HSP's gapped (non-prelim): 293
length of query: 190
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 56
effective length of database: 9,215,130,721
effective search space: 516047320376
effective search space used: 516047320376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)