BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15512
(786 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QP4|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 252 NPRQVL---YEYWARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLV 308
NPR VL Y +W W K + E+F + +Y +W GW+ L+
Sbjct: 121 NPRDVLVSGYFFWKNWKFIKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMREEKNFLL 180
Query: 309 FLYGVVTMNTNRVAHEIC 326
Y + +T R +IC
Sbjct: 181 LSYEELKQDTGRTIEKIC 198
>pdb|1J99|A Chain A, Crystal Structure Of Human Dehydroepiandrosterone
Sulfotransferase In Complex With Substrate
Length = 293
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 252 NPRQVL---YEYWARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLV 308
NPR VL Y +W K + E+F + +Y +W GW+ L+
Sbjct: 130 NPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMREEKNFLL 189
Query: 309 FLYGVVTMNTNRVAHEIC 326
Y + +T R +IC
Sbjct: 190 LSYEELKQDTGRTIEKIC 207
>pdb|1OV4|A Chain A, Crystal Structure Of Human Dhea-st Complexed With
Androsterone
Length = 293
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 252 NPRQVL---YEYWARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLV 308
NPR VL Y +W K + E+F + +Y +W GW+ L+
Sbjct: 130 NPRDVLVSGYFFWKNMKFIKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMREEKNFLL 189
Query: 309 FLYGVVTMNTNRVAHEIC 326
Y + +T R +IC
Sbjct: 190 LSYEELKQDTGRTIEKIC 207
>pdb|1EFH|A Chain A, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
pdb|1EFH|B Chain B, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
Length = 292
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 252 NPRQVL---YEYWARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLV 308
NPR VL Y +W K + E+F + +Y +W GW+ L+
Sbjct: 122 NPRDVLVSGYFFWKNMKFIKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMREEKNFLL 181
Query: 309 FLYGVVTMNTNRVAHEIC 326
Y + +T R +IC
Sbjct: 182 LSYEELKQDTGRTIEKIC 199
>pdb|3F3Y|A Chain A, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|B Chain B, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|C Chain C, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|D Chain D, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
Length = 285
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 252 NPRQVL---YEYWARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLV 308
NPR VL Y +W K + E+F + +Y +W GW+ L+
Sbjct: 122 NPRDVLVSGYFFWKNMKFIKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMREEKNFLL 181
Query: 309 FLYGVVTMNTNRVAHEIC 326
Y + +T R +IC
Sbjct: 182 LSYEELKQDTGRTIEKIC 199
>pdb|4IFB|A Chain A, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
pdb|4IFB|B Chain B, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
Length = 285
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 252 NPRQVL---YEYWARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLV 308
NPR VL Y +W K + E+F + +Y +W GW+ L+
Sbjct: 122 NPRDVLVSGYFFWKNMKFIKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMREEKNFLL 181
Query: 309 FLYGVVTMNTNRVAHEIC 326
Y + +T R +IC
Sbjct: 182 LSYEELKQDTGRTIEKIC 199
>pdb|2QP3|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 252 NPRQVL---YEYWARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLV 308
NPR VL Y +W K + E+F + +Y +W GW+ L+
Sbjct: 121 NPRDVLVSGYFFWKNIKFIKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMREEKNFLL 180
Query: 309 FLYGVVTMNTNRVAHEIC 326
Y + +T R +IC
Sbjct: 181 LSYEELKQDTGRTIEKIC 198
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 343 GCGYWQLSDICGYAKISYLFDHPGTVFY-SVFVS---FWAVT-FLEYWKRKSASLAHYWD 397
C ++ + G +S LF+HP V Y + F++ W VT F+ Y K H+ D
Sbjct: 48 ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD 107
Query: 398 VM 399
M
Sbjct: 108 GM 109
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 343 GCGYWQLSDICGYAKISYLFDHPGTVFY-SVFVS---FWAVT-FLEYWKRKSASLAHYWD 397
C ++ + G +S LF+HP V Y + F++ W VT F+ Y K H+ D
Sbjct: 64 ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD 123
Query: 398 VM 399
M
Sbjct: 124 GM 125
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,265,920
Number of Sequences: 62578
Number of extensions: 948243
Number of successful extensions: 2465
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2450
Number of HSP's gapped (non-prelim): 27
length of query: 786
length of database: 14,973,337
effective HSP length: 107
effective length of query: 679
effective length of database: 8,277,491
effective search space: 5620416389
effective search space used: 5620416389
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)