Query psy15512
Match_columns 786
No_of_seqs 256 out of 662
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 23:13:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15512.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15512hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2514|consensus 100.0 1E-148 3E-153 1261.1 33.1 679 35-785 5-704 (861)
2 PF04547 Anoctamin: Calcium-ac 100.0 2.6E-98 6E-103 853.8 36.8 397 276-767 1-399 (452)
3 KOG2513|consensus 100.0 6.2E-93 1.3E-97 786.6 38.3 512 115-767 30-558 (647)
4 KOG2514|consensus 99.7 5.7E-20 1.2E-24 211.5 -4.3 464 28-564 114-585 (861)
5 PF02714 DUF221: Domain of unk 98.5 3.3E-05 7.1E-10 84.9 24.4 218 488-764 102-324 (325)
6 KOG1134|consensus 96.0 0.83 1.8E-05 55.8 22.3 216 485-764 409-630 (728)
7 COG5594 Uncharacterized integr 90.9 39 0.00084 41.5 22.6 62 484-549 462-523 (827)
8 PF02532 PsbI: Photosystem II 71.2 11 0.00024 27.7 4.6 31 529-559 2-32 (36)
9 CHL00024 psbI photosystem II p 47.9 6.7 0.00014 28.8 0.2 27 529-555 2-28 (36)
10 PRK13863 type IV secretion sys 46.7 30 0.00065 39.1 5.1 62 40-101 109-182 (446)
11 PRK02655 psbI photosystem II r 46.6 7.2 0.00016 28.9 0.2 26 529-554 2-27 (38)
12 PRK01844 hypothetical protein; 34.3 73 0.0016 27.4 4.4 35 447-481 7-41 (72)
13 PF04547 Anoctamin: Calcium-ac 33.6 7.9E+02 0.017 28.3 16.3 37 621-657 237-273 (452)
14 PRK00523 hypothetical protein; 32.2 83 0.0018 27.1 4.4 36 446-481 7-42 (72)
15 PRK09371 gas vesicle synthesis 28.8 2E+02 0.0044 24.4 5.9 48 85-132 11-61 (68)
16 COG1377 FlhB Flagellar biosynt 27.3 5.9E+02 0.013 28.8 11.3 27 396-428 109-135 (363)
17 PF09773 Meckelin: Meckelin (T 23.7 1.6E+02 0.0035 37.2 6.8 25 367-391 367-391 (853)
18 KOG3415|consensus 20.8 85 0.0018 29.3 2.6 17 366-382 108-124 (129)
19 PF08114 PMP1_2: ATPase proteo 20.6 1.1E+02 0.0023 23.5 2.6 22 449-470 14-35 (43)
20 PF06877 RraB: Regulator of ri 20.3 1.7E+02 0.0038 26.3 4.7 35 44-101 22-56 (104)
No 1
>KOG2514|consensus
Probab=100.00 E-value=1.3e-148 Score=1261.14 Aligned_cols=679 Identities=47% Similarity=0.803 Sum_probs=600.6
Q ss_pred CCCcccccCCCcceeEEEEeeecCCCCCCCCCCCCCcchHhhHHHHHHHHHHHHHHHHcCceEEEEEEeeeccceEEEEE
Q psy15512 35 SGKLTYFRDGRRKIDYVLVYEYVPSGRCSSSSSHGSSSEKKLAKYENWRTTFMANLERAGLQMEKEVIQTVNKKCVHFTK 114 (786)
Q Consensus 35 ~~~~~~F~Dg~r~iDfVLvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~Fe~nL~~~GLelE~e~~~~~~~~~~~FvK 114 (786)
.+.++.|+||+|+|||||||+.-... ...++|++||+||+++||++|++ ++++|+|
T Consensus 5 ~~~~~~~~~~~~~id~vl~~~~~~~~-----------------~~~~~r~~fe~nl~~egl~~e~~-------~~~~f~~ 60 (861)
T KOG2514|consen 5 TTVSLPFFDGRRSIDFVLVYRGAETR-----------------SEGKRREFFEKNLIKEGLEVEHE-------QSTHFVK 60 (861)
T ss_pred CccccccCCCccccceEeeccccccc-----------------cchhhHHHHHhhhhhhhceeccc-------cceeeee
Confidence 34778999999999999999832221 12467799999999999999987 2379999
Q ss_pred EecChHHHHHHHHHcccccccccCcccc--hhhhhhhhhh--------cccCCcCCCCCCCCCCCcceeccccccccccc
Q psy15512 115 IHAPWSVLCQYAEELNMRAPLQANVNPI--LNWSEHLLQT--------LRIPNIMSQDVPNKPTDYFTGPFRRSKIHKYV 184 (786)
Q Consensus 115 IhAP~~vL~ryAE~L~lk~Plk~~~~~~--~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~t~~F~~~k~~~F~ 184 (786)
||+||++|.|+||.++++||+++..... ..+.+..+.. +.....+.+.- +...+.|++++++.+.++|.
T Consensus 61 ih~p~~~l~r~ae~~k~~~p~k~~~~~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~~sr~~~~~f~ 139 (861)
T KOG2514|consen 61 IHAPWHVLTREAEMLKLKMPLKDCQVKSVLPSSCIPLFQIFVTDDTQPLQRKHGSLFLN-LEDEKSFTASSSRGKEYQFI 139 (861)
T ss_pred ccCcchhHHHHHHHHHhhhhHHhhhhccCCCcccchHHhhhhhhhhhhhhhcccccccc-ccccccccccccCcceEEEE
Confidence 9999999999999999999999751111 1111111110 10000001111 22456788899999988888
Q ss_pred ccCCCcccCChhHHHHHHHHHHhcCccCccccCccccccccccccEEEeeeCCCcccccccCCCCCCchhHHHHHHHhhh
Q psy15512 185 GSDNQATFFSNAQRIRIVYEILSTALYGEKRKGEVGVDRLVEEGIFLSAFPLHDGTYYVAKDHSDQLNPRQVLYEYWARW 264 (786)
Q Consensus 185 ~~~~~~~fFt~a~R~rIv~~iL~~~~~~~~~~~~~gi~~Ll~~g~~~~~fPLHd~~~~~~~~~~~~~~~R~~L~~~Wa~~ 264 (786)
..+++++|+.++|+++|+.++.|+++.+ ....+||.+|+++|+|.++|||||+++.. ..+..++|..|++.|++|
T Consensus 140 -~k~~~~~f~~a~rs~~ve~~l~rt~~~~-~~~~~gi~~l~~~~~y~aa~plh~g~~~~---~~~~~~~r~~lyq~wa~~ 214 (861)
T KOG2514|consen 140 -IKIDDTFFTKAERSRIVEPILPRTSFIE-QLRRKGIRRLIASGVYEAAFPLHDGEYKA---MQGGSVDRYLLYQLWANW 214 (861)
T ss_pred -EecCchhhhhhhhhhhchhhcccccchh-hhhhhchHHHHhhcceeeeeeccccCccc---ccccchhHHHHHhccccc
Confidence 7778899999999999999999998863 55679999999999999999999999833 234568899999999999
Q ss_pred ccccccCCchhHHhhhcccchhhHHHHHHHHHhhhHHHHHHHHHHhhhheeccCCcchhcccCCCCcccccCCCcCCCCc
Q psy15512 265 GRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLVFLYGVVTMNTNRVAHEICTTGDDITMCPLCDKELGC 344 (786)
Q Consensus 265 ~~~~~~QPld~Ir~YFGekIalYFawLgfYT~~L~~~ai~Gl~~~l~g~~~~~~~~~~~eic~~~~~~~mcp~c~~~~~c 344 (786)
.+|+++||+|.||+|||||||+||||+|+||.+|+|+|++|++||+||+++..++++++++|+.+.+.+|||+|| .|
T Consensus 215 ~~wyk~qpl~~ir~yfg~ki~lyfawlg~yt~~l~~~ai~glivf~yg~~~~~~~~~~~~~c~~~~~~t~cplcd---~c 291 (861)
T KOG2514|consen 215 ERWYKFQPLDLIRKYFGEKIALYFAWLGTYTTMLWPASIVGLIVFIYGLATLENAPPSKEICKVFTNITMCPLCD---MC 291 (861)
T ss_pred CcccccChHHHHHHhhhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcCCchHHHHhhcCcEEeccccc---cc
Confidence 999999999999999999999999999999999999999999999999999999999999999989999999999 79
Q ss_pred ccccccccccchhhccccCCCcchhhHHHHHHHHHHHHHHHhhhhhhhhhccCCCCccccccccCcccccccCcccccCC
Q psy15512 345 GYWQLSDICGYAKISYLFDHPGTVFYSVFVSFWAVTFLEYWKRKSASLAHYWDVMGFTDEIERPRPEFAARAPFQKINPV 424 (786)
Q Consensus 345 ~~w~l~~~c~~~k~~~lfdn~~tv~faif~~lWat~Fle~WKR~~~~la~~Wg~~~~~~~ee~~Rp~f~g~~~~~~~n~v 424 (786)
.||+|+.+|.+++.+|||||+.|++||+||++|+++|+|+|||+++.+.++||..+++++||..+|+|...+ ..+++
T Consensus 292 ~~~~l~~sc~~~~~~~lfdn~~tvffavfms~wat~f~e~wkr~~~vl~~~wdl~~~~~~ee~~~~~~~~~~---~~~~~ 368 (861)
T KOG2514|consen 292 NYWRLSESCVTAKVTYLFDNPSTVFFAVFMSIWATVFLELWKRKQSVLTYRWDLTGFEEEEEDRPEQFEAKY---ETDPI 368 (861)
T ss_pred cceehHHHHHhhHHHHHhccchHHHHHHHHHHhHHHHHHHHHhhheeeeeeeccccccccccccchhhhhhh---eeecc
Confidence 999999999999999999999999999999999999999999999999999999999998877777888754 34888
Q ss_pred CC-ceeeccCcccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy15512 425 TG-VKEPSFPKSLRNTRIIAGMGLVFLMISLVFIFILAVIIYRVLISIPLFQNSALRSFAQTVASVSGAVVNLFLIMAMS 503 (786)
Q Consensus 425 Tg-~~e~~~p~~~r~~r~~~s~~~v~~~i~lv~~~v~~vi~yr~~~~~~~~~~~~~~~~~~~~~s~~~~iln~v~I~il~ 503 (786)
|+ +.+++.|++.|..+++++.+.+++|++++++++++|++||..+...+...+..+......++.+++++|+++|++||
T Consensus 369 ~~~~~~~~~~~~~r~~~~l~~~~~v~f~iav~~~~~l~V~lyri~~~~a~~~~~~~~~~~~~~at~~a~~in~~~i~~L~ 448 (861)
T KOG2514|consen 369 TNEEDEPISPWRDRYIAMLASFSFVLFMIAVVFSAVLGVILYRISMVAALQCGKFTTSHAWLSATATAVIINLVVIMILN 448 (861)
T ss_pred cCCCCcccCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceehhhhHhHHHHHHHHHHHHHHHH
Confidence 87 77888889999999999999999999999999999999999998887744777778888899999999999999999
Q ss_pred HHHHHHHHHHhcccCCCChhHhhhhhHHHHHHHHHHHhhHHHHHHHHhcCcccCCCCCcchhccc-cccccCCCccHHHH
Q psy15512 504 NLYEKLALRLTSWEMHRTQTEFDDSLTFKVFIFQFVNYYSSIFYIAFFKGRFVGCPGNYSKIWSL-RNEDCRTGGCLIEL 582 (786)
Q Consensus 504 ~iY~~iA~~Lt~~EnhrT~~~ye~sli~K~FlF~FvN~y~slfYiAF~~~~f~g~pg~y~~~~g~-r~e~c~~~gCl~~L 582 (786)
.+|.++|.+||+||||||+++||||||+|+|+|||||+|+|+||||||+|+|+|+||+|+.+||. |+|+|+|+||+++|
T Consensus 449 ~iy~~~a~~lt~~e~prTe~~~ensl~~KiflfqfvN~yssifYVAFfkg~fvg~pg~~~~~f~~~r~eeC~p~gCl~eL 528 (861)
T KOG2514|consen 449 AIYSNLASRLTNLENPRTESEFENSLILKIFLFQFVNYYSSIFYIAFFKGRFVGYPGDYVYLFGRYRNEECDPGGCLSEL 528 (861)
T ss_pred HHhhhHHHHHhhhcCccchhhhcchhHHHHHHHHHHHhcCceEEEEEEeceeccCCCCcceecccceeccccccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhccCCchHHHHHHHHHHHhhccccccccccCcchhhhHHHHhhhhhh
Q psy15512 583 AQQLAVIMIGKQFFNNVKEVGVPKVKAWFQRKKCRTGGCLIELAQQLAVIMIGKQFFNNVKEVGVPKVKAWFQRKKVQLS 662 (786)
Q Consensus 583 ~~qL~~imv~kQii~n~~E~~~P~l~~~~~~~k~~~~g~l~el~~Qla~~~~gkq~~~~~~E~g~pk~k~~~~~k~~~~s 662 (786)
|+||.+||++||++||++|+++|++.+|+++.+.+.. ..... . .
T Consensus 529 ciQl~iimlgKq~~nn~~ev~~P~f~~~~~~~~~~~~------------------s~~~~---~--------------~- 572 (861)
T KOG2514|consen 529 CIQLAIIMLGKQIWNNFMEVGLPKFWKLIRQYKLKTE------------------ARVTI---D--------------D- 572 (861)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhcc------------------CCCcc---c--------------h-
Confidence 9999999999999999999999999999988765543 11110 0 0
Q ss_pred hhccchhhhhhccCCCc--ccchHHHHHHHHHHHHHHHhhhhcchHHHHHHHhhHHHHhhhHHHHHhhccCCCccccccc
Q psy15512 663 KSHLKTRWEKDNHLPIN--KGLFEEYLEMVLQFGFITIFVAAFPLAPLFALLNNWVEIRLDAQKFLCQTRRVVPERAENI 740 (786)
Q Consensus 663 ~~~~~~~~e~d~~L~~~--~glf~dYlEmviQFGyvtlF~~afPLApl~AllnNiiEiR~Da~Kl~~~~rRP~p~ra~~I 740 (786)
.+....+||+||.|.|. .||++||+||++||||||+|+++|||||++|||||++|+|+||+||+++.|||++.|+.||
T Consensus 573 ~~~~~~~w~~d~~L~p~~~~gL~~eylemi~q~gFvtlFva~FpLaplfaLLnniieirlda~Kl~t~~rRpv~~r~~di 652 (861)
T KOG2514|consen 573 DSANVERWEQDYHLQPMGLLGLTPEYLEMILQFGFVTLFVAAFPLAPLFALLNNIIEIRLDAKKLVTQKRRPVAARAVDI 652 (861)
T ss_pred hhhcccchhhccccCCcccccccHHHHHHHHHhccchhhhhhhhhHHHHHHHHHHHhhhhhHHHHHHhhhcchhHHHhhh
Confidence 11124689999999994 4999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhHhhhcCCcccceeeeEeecCC-------CCcc
Q psy15512 741 GIWFKILDMLAHLAVISNGFLIAFTSDFLPKLLYQYEHNWS-------LGWH 785 (786)
Q Consensus 741 G~W~~iL~~i~~laVitNa~lIaftS~~ipr~~y~~~~~~~-------~~~~ 785 (786)
|+|+.||++|+++|||||+++||+|||+|||+||.|.||.+ .|+|
T Consensus 653 G~W~~il~~i~~lavi~nafiIa~tsd~Iprlvy~~k~s~~~~~~~S~~tl~ 704 (861)
T KOG2514|consen 653 GAWYGILQGIGKLAVITNAFIIAFTSDFIPRLVYEFKYSKSQPRMRSFGTLL 704 (861)
T ss_pred hhhHhhhcceeeEEeecceeeeeeeccchhhhhheeEeccCCCcccccchhh
Confidence 99999999999999999999999999999999999999998 7765
No 2
>PF04547 Anoctamin: Calcium-activated chloride channel; InterPro: IPR007632 This family contains the anoctamin/TMEM16 proteins which are thought to be calcium-dependent chloride channel [].
Probab=100.00 E-value=2.6e-98 Score=853.78 Aligned_cols=397 Identities=50% Similarity=0.886 Sum_probs=354.7
Q ss_pred HHhhhcccchhhHHHHHHHHHhhhHHHHHHHHHHhhhheeccCCcchhcccCCCCcccccCCCcCCCCcccccccccccc
Q psy15512 276 IREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLVFLYGVVTMNTNRVAHEICTTGDDITMCPLCDKELGCGYWQLSDICGY 355 (786)
Q Consensus 276 Ir~YFGekIalYFawLgfYT~~L~~~ai~Gl~~~l~g~~~~~~~~~~~eic~~~~~~~mcp~c~~~~~c~~w~l~~~c~~ 355 (786)
||+|||||||+|||||||||+||+|||++|++++++|..
T Consensus 1 Ir~YFGekia~YFafl~~yt~~L~~~ai~G~~~~~~~~~----------------------------------------- 39 (452)
T PF04547_consen 1 IRSYFGEKIAFYFAFLGFYTRWLIPPAIFGLIVFLYGLS----------------------------------------- 39 (452)
T ss_pred ChHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------------------
Confidence 799999999999999999999999999999999999853
Q ss_pred hhhccccCCCcchhhHHHHHHHHHHHHHHHhhhhhhhhhccCCCCccccccccCcccccccCcccccCCCCceeeccCcc
Q psy15512 356 AKISYLFDHPGTVFYSVFVSFWAVTFLEYWKRKSASLAHYWDVMGFTDEIERPRPEFAARAPFQKINPVTGVKEPSFPKS 435 (786)
Q Consensus 356 ~k~~~lfdn~~tv~faif~~lWat~Fle~WKR~~~~la~~Wg~~~~~~~ee~~Rp~f~g~~~~~~~n~vTg~~e~~~p~~ 435 (786)
.++.+|++++++||++|++||++|+|+|||||++++++||+.++++++|++||+|+|+ ..+.|||||++||++|.|
T Consensus 40 --~~~~~~~~~~~~fai~~~~W~~~fle~Wkr~~~~l~~~Wg~~~~~~~~e~~r~~f~g~--~~~~~~vtg~~~~~~p~~ 115 (452)
T PF04547_consen 40 --FSYLFDNPFTPFFAIFMSLWATLFLEFWKRKEAELAYRWGTFDFEEEEEEPRPEFKGQ--PIRIDPVTGEMEPYYPPW 115 (452)
T ss_pred --cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhccchhhccc--cccccccCCCCccCCcHH
Confidence 2456889999999999999999999999999999999999999995567899999995 347999999999999999
Q ss_pred cchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15512 436 LRNTRIIAGMGLVFLMISLVFIFILAVIIYRVLISIPLFQNSALRSFAQTVASVSGAVVNLFLIMAMSNLYEKLALRLTS 515 (786)
Q Consensus 436 ~r~~r~~~s~~~v~~~i~lv~~~v~~vi~yr~~~~~~~~~~~~~~~~~~~~~s~~~~iln~v~I~il~~iY~~iA~~Lt~ 515 (786)
+|..|.++|+++++++++++++++++++.++..+...+.... ...+.+++|+++|+++|+++|.+|+++|.+||+
T Consensus 116 ~r~~r~~~s~~ivl~~i~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~vl~~v~i~il~~iy~~~a~~Lt~ 190 (452)
T PF04547_consen 116 KRILRYLVSVPIVLLFILIVIGIVIGVFYLRIYLTEIYSGPG-----KQFLASLIPTVLNAVVILILNFIYRKLAKKLTD 190 (452)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----hhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999988876654211 345678899999999999999999999999999
Q ss_pred ccCCCChhHhhhhhHHHHHHHHHHHhhHHHHHHHHhcCcccCCCCCcchhccccccccCCCccHHHHHHHHHHHHHHHHH
Q psy15512 516 WEMHRTQTEFDDSLTFKVFIFQFVNYYSSIFYIAFFKGRFVGCPGNYSKIWSLRNEDCRTGGCLIELAQQLAVIMIGKQF 595 (786)
Q Consensus 516 ~EnhrT~~~ye~sli~K~FlF~FvN~y~slfYiAF~~~~f~g~pg~y~~~~g~r~e~c~~~gCl~~L~~qL~~imv~kQi 595 (786)
||||||+++||+|+|+|+|+|+|+|+|+||||+||+++ .+.++|++ |+.+|+.||+++|+++|+
T Consensus 191 ~EnhrT~~~ye~sli~K~F~f~fvn~y~~LfyiaF~~~--------------~~~~~~~~--~~~~L~~ql~~~~~~~qi 254 (452)
T PF04547_consen 191 WENHRTESEYENSLIIKVFLFQFVNSYAPLFYIAFFYG--------------VRQEECQP--CLSRLRIQLFTIMVTKQI 254 (452)
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------hcccccCC--CHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987 26788999 999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHhhhhhccCCchHHHHHHHHHHHhhccccccccccCcchhhhHHHHhhhhhhhhccchhhhhhcc
Q psy15512 596 FNNVKEVGVPKVKAWFQRKKCRTGGCLIELAQQLAVIMIGKQFFNNVKEVGVPKVKAWFQRKKVQLSKSHLKTRWEKDNH 675 (786)
Q Consensus 596 i~n~~E~~~P~l~~~~~~~k~~~~g~l~el~~Qla~~~~gkq~~~~~~E~g~pk~k~~~~~k~~~~s~~~~~~~~e~d~~ 675 (786)
++|++|.++|++++++++++.++.+ +..... ++.. ..++....++||+|+.
T Consensus 255 ~~~~~e~~~P~~~~~~~~~~~~~~~---------------~~~~~~-~~~~-------------~~~~~~~~~~~~~e~~ 305 (452)
T PF04547_consen 255 INNLLEVVLPYLKKRYRRKKIRKKQ---------------RKKQQD-ERQE-------------NEEENQFLQQWEKEYE 305 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---------------hhcccc-cccc-------------cccccchHHHHHHHhc
Confidence 9999999999999888766444320 000000 0000 0001223578999999
Q ss_pred CCCcc--cchHHHHHHHHHHHHHHHhhhhcchHHHHHHHhhHHHHhhhHHHHHhhccCCCcccccccchHHHHHHHHHHH
Q psy15512 676 LPINK--GLFEEYLEMVLQFGFITIFVAAFPLAPLFALLNNWVEIRLDAQKFLCQTRRVVPERAENIGIWFKILDMLAHL 753 (786)
Q Consensus 676 L~~~~--glf~dYlEmviQFGyvtlF~~afPLApl~AllnNiiEiR~Da~Kl~~~~rRP~p~ra~~IG~W~~iL~~i~~l 753 (786)
|+||+ |+|+||+||++||||||||++||||||++|++||++|+|+||+||++.+|||+|+|++|||+|++||++++++
T Consensus 306 l~~y~~~g~~~dY~emviQFGyv~lF~~afPlapl~allnN~~eir~D~~Kl~~~~rRP~p~~~~~IG~W~~il~~i~~l 385 (452)
T PF04547_consen 306 LPPYDPDGLFDDYLEMVIQFGYVTLFSAAFPLAPLFALLNNIVEIRLDAFKLLYLYRRPVPRRASSIGIWNNILEIISWL 385 (452)
T ss_pred CCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhCCCCcccccchhhhHHHHHHHHHH
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhhhcCC
Q psy15512 754 AVISNGFLIAFTSD 767 (786)
Q Consensus 754 aVitNa~lIaftS~ 767 (786)
||+|||++|++|||
T Consensus 386 av~tN~~li~~~s~ 399 (452)
T PF04547_consen 386 AVITNAALIAFTSD 399 (452)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999999993
No 3
>KOG2513|consensus
Probab=100.00 E-value=6.2e-93 Score=786.64 Aligned_cols=512 Identities=33% Similarity=0.534 Sum_probs=407.0
Q ss_pred EecChHHHHHHHHHcccccccccCcccchhhhhhhhhhcccCCcCCCCCCCCCCCcceeccccccccccccc-CCCcccC
Q psy15512 115 IHAPWSVLCQYAEELNMRAPLQANVNPILNWSEHLLQTLRIPNIMSQDVPNKPTDYFTGPFRRSKIHKYVGS-DNQATFF 193 (786)
Q Consensus 115 IhAP~~vL~ryAE~L~lk~Plk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~t~~F~~~k~~~F~~~-~~~~~fF 193 (786)
+.++..+|++.|++.++++-++.+. + .+ ...|.+...|.+.+. +|.+++|
T Consensus 30 ~~~~~~~ll~~~~~~~~~k~v~~~~--------------~--------~~-------~r~F~~~e~d~~~~l~~~lr~~~ 80 (647)
T KOG2513|consen 30 VMATTISLLRGAQEIGLRKTVEANE--------------K--------TL-------KRVFTREEIDCLIELAHDLRTSF 80 (647)
T ss_pred HHHhHHHHHhhhhhhccceeeeccC--------------C--------Cc-------eeEEEeeccchhhhhcchhhhhh
Confidence 3478899999999999887776520 0 01 135666667777754 3455699
Q ss_pred ChhHHHHHHHHHHhcCccCc---------cccCccccccccccccEEEeeeCCCcccccccCCCCCCchhHHHHHHHhhh
Q psy15512 194 SNAQRIRIVYEILSTALYGE---------KRKGEVGVDRLVEEGIFLSAFPLHDGTYYVAKDHSDQLNPRQVLYEYWARW 264 (786)
Q Consensus 194 t~a~R~rIv~~iL~~~~~~~---------~~~~~~gi~~Ll~~g~~~~~fPLHd~~~~~~~~~~~~~~~R~~L~~~Wa~~ 264 (786)
|..+|+.++++-|.+.+..+ ..+++.+++.+...|.+.+.|||||.... .++.++|..
T Consensus 81 t~~~~q~~n~~~l~~~~a~~~e~i~~~a~~~~~~~i~~~~~~~g~I~~vFpLh~p~~l------------~~~~~~W~~- 147 (647)
T KOG2513|consen 81 TSQERQQLNAHELQSLRAPDEEIILNAAIPYHIQSIIRDLHKSGIIIQVFPLHDPKQL------------EKLNKYWYQ- 147 (647)
T ss_pred hHHHHHHHHHHHHHHhhccchhhhhccceeccccccchhhhhCceeEEeccccChHHH------------HHHHHHHHH-
Confidence 99999999999998876542 13566778889999999999999997543 357788875
Q ss_pred ccccccCCchhHHhhhcccchhhHHHHHHHHHhhhHHHHHHHHHHhhhheeccCCcchhcccCCCCcccccCCCcCCCCc
Q psy15512 265 GRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLVFLYGVVTMNTNRVAHEICTTGDDITMCPLCDKELGC 344 (786)
Q Consensus 265 ~~~~~~QPld~Ir~YFGekIalYFawLgfYT~~L~~~ai~Gl~~~l~g~~~~~~~~~~~eic~~~~~~~mcp~c~~~~~c 344 (786)
...+.||||.||.|||++||+|||||+|||..+++||++|++.+.+-..
T Consensus 148 -~~~~nqpld~I~~yfG~~ialYfa~L~~ft~a~i~~a~~g~~~Y~f~~~------------------------------ 196 (647)
T KOG2513|consen 148 -LLTKNQPLDDIRAYFGSKIALYFAFLEFFTFALIVPAVFGILLYEFLST------------------------------ 196 (647)
T ss_pred -HHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhHHHhhcccc------------------------------
Confidence 3334599999999999999999999999999999999999998654210
Q ss_pred ccccccccccchhhccccCCCcchhhHHHHHHHHHHHHHHHhhhhhhhhhccCCCCccccccccCcccccccCcccccCC
Q psy15512 345 GYWQLSDICGYAKISYLFDHPGTVFYSVFVSFWAVTFLEYWKRKSASLAHYWDVMGFTDEIERPRPEFAARAPFQKINPV 424 (786)
Q Consensus 345 ~~w~l~~~c~~~k~~~lfdn~~tv~faif~~lWat~Fle~WKR~~~~la~~Wg~~~~~~~ee~~Rp~f~g~~~~~~~n~v 424 (786)
....+||.|+++|+++|+|+|||++++++++||+.+..+..+.|||+|.| ..+.|++
T Consensus 197 --------------------~s~~~f~~f~vlWttlFlefWkrk~a~l~~~Wgt~~~~e~~~~prp~~~g---~~~~n~i 253 (647)
T KOG2513|consen 197 --------------------YSLTFFASFNVLWTTLFLEFWKRKCAELTYRWGTLLSKELSEEPRPEFLG---VLRINSI 253 (647)
T ss_pred --------------------hhhhHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhhhhhcCCCchhcc---ccccCcc
Confidence 02348999999999999999999999999999999988666799999998 5789999
Q ss_pred CCceeeccCcccc-hhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy15512 425 TGVKEPSFPKSLR-NTRIIAGMGLVFLMISLVFIFILAVIIYRVLISIPLFQNSALRSFAQTVASVSGAVVNLFLIMAMS 503 (786)
Q Consensus 425 Tg~~e~~~p~~~r-~~r~~~s~~~v~~~i~lv~~~v~~vi~yr~~~~~~~~~~~~~~~~~~~~~s~~~~iln~v~I~il~ 503 (786)
||+.|||||.|+| ..++++|+|+++.++|+++.+++..+....++...+ + +++ .-+++++|+|+.+++|.+|+
T Consensus 254 tgk~e~~yp~w~~~~~~~~vsvPv~l~c~~i~l~f~l~~f~ie~~~~s~~-~-~~~----~sils~lP~iv~~~li~~~t 327 (647)
T KOG2513|consen 254 TGKAEPYYPEWKRILRRYLVSVPVILLCLCILLSFMLYCFQIEVWVLSDY-G-GPL----ISILSYLPTIVYAVLIPVLT 327 (647)
T ss_pred ccccCccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-Cch----HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999996 567899999988877776655544433333332221 2 222 34678999999999999999
Q ss_pred HHHHHHHHHHhcccCCCChhHhhhhhHHHHHHHHHHHhhHHHHHHHHhcCcccCCCCCcchhccccccccCCCccHHHHH
Q psy15512 504 NLYEKLALRLTSWEMHRTQTEFDDSLTFKVFIFQFVNYYSSIFYIAFFKGRFVGCPGNYSKIWSLRNEDCRTGGCLIELA 583 (786)
Q Consensus 504 ~iY~~iA~~Lt~~EnhrT~~~ye~sli~K~FlF~FvN~y~slfYiAF~~~~f~g~pg~y~~~~g~r~e~c~~~gCl~~L~ 583 (786)
.+|.++|++||+||||||+++|++|++.|+|+|+|+|+|.|||||||+++++ ..|+
T Consensus 328 ~~Y~k~Ae~Lt~~EN~r~~s~y~~hli~K~~lf~f~nsy~sLFyi~f~l~d~------------------------~~Lk 383 (647)
T KOG2513|consen 328 RIYKKLAEFLTKLENHRLESAYQKHLIAKVFLFNFVNSYLSLFYIAFLLRDM------------------------ELLK 383 (647)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------------------------HHHH
Confidence 9999999999999999999999999999999999999999999999999885 4899
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhh----hccCCchHHHHHHHHHHHhhccccccccccCcchhhhHHHHhhh
Q psy15512 584 QQLAVIMIGKQFFNNVKEVGVPKVKAWFQRKK----CRTGGCLIELAQQLAVIMIGKQFFNNVKEVGVPKVKAWFQRKKV 659 (786)
Q Consensus 584 ~qL~~imv~kQii~n~~E~~~P~l~~~~~~~k----~~~~g~l~el~~Qla~~~~gkq~~~~~~E~g~pk~k~~~~~k~~ 659 (786)
+||++.+++.|++.+++|..+|+++..+++.+ .+.+ ..++.+ ++.+..-+....|.|+- ..
T Consensus 384 ~~l~~~li~sQ~l~~~~e~~~p~f~~~~~r~~~~~~f~t~----~~ae~~----~s~~~~i~~~~~~~~~~-------s~ 448 (647)
T KOG2513|consen 384 QQLATLLITSQSLLNLMEIALPYFKIRTKRYENYIRFRTK----SFAEEL----ASAQAKIDGESPGFPAP-------SR 448 (647)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHhhhhhhhhhhHHHH----HHHHhh----ccchhhhcccccCCCCc-------cc
Confidence 99999999999999999999999876655333 1111 011111 00000000000111100 00
Q ss_pred hh--hhhccchhhhhhccCCCcccchHHHHHHHHHHHHHHHhhhhcchHHHHHHHhhHHHHhhhHHHHHhhccCCCcccc
Q psy15512 660 QL--SKSHLKTRWEKDNHLPINKGLFEEYLEMVLQFGFITIFVAAFPLAPLFALLNNWVEIRLDAQKFLCQTRRVVPERA 737 (786)
Q Consensus 660 ~~--s~~~~~~~~e~d~~L~~~~glf~dYlEmviQFGyvtlF~~afPLApl~AllnNiiEiR~Da~Kl~~~~rRP~p~ra 737 (786)
+. +......+.+.|..+.+|+|+|+||+||++|||||+||++||||||++|++||++|||+||+|||..+|||+|+|+
T Consensus 449 ~~~a~~~~~~~qa~~E~~~~~ydgtf~Dylel~lQFGyvVlFS~~~PLA~~~aLvnNv~eirsda~Kl~~~~krPfp~r~ 528 (647)
T KOG2513|consen 449 EPEAQLFPSLKQAELESGLAEYDGTFDDYLELLLQFGYVVLFSCAFPLAAIFALVNNVIEIRSDALKLCLVLKRPFPRRV 528 (647)
T ss_pred ccchhhcccchhhhhcchhhhhcchhHHHHHHHHHhhHHHHHHhHhhHHHHHHHHHHHhhhhHHHHHHHHhcCCCCcchh
Confidence 00 0000124566777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHhHhhhcCC
Q psy15512 738 ENIGIWFKILDMLAHLAVISNGFLIAFTSD 767 (786)
Q Consensus 738 ~~IG~W~~iL~~i~~laVitNa~lIaftS~ 767 (786)
.+||+|+++|++++++|++|||+||++.++
T Consensus 529 ~~IG~Wq~~l~~lSvls~vtncaLi~~~~~ 558 (647)
T KOG2513|consen 529 ANIGAWQNALELLSVLSCVTNCALIGMYPQ 558 (647)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHhcccc
Confidence 999999999999999999999999998764
No 4
>KOG2514|consensus
Probab=99.74 E-value=5.7e-20 Score=211.53 Aligned_cols=464 Identities=8% Similarity=-0.147 Sum_probs=307.6
Q ss_pred CCCCCCCCCCcccccCCCcceeEEEEeeecCCCCCCCCCCCCCcchHhhHHHHHHHHHHHHHHHHcCceEEEEEEeeecc
Q psy15512 28 QNYPSSFSGKLTYFRDGRRKIDYVLVYEYVPSGRCSSSSSHGSSSEKKLAKYENWRTTFMANLERAGLQMEKEVIQTVNK 107 (786)
Q Consensus 28 ~~~~~~~~~~~~~F~Dg~r~iDfVLvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~Fe~nL~~~GLelE~e~~~~~~~ 107 (786)
............||+++.|.. +-+++...+.. ...+.+++ .+.+|+..+...+
T Consensus 114 ~~~~~~~~~~~~f~~~~sr~~-~~~f~~k~~~~-------------------~f~~a~rs--~~ve~~l~rt~~~----- 166 (861)
T KOG2514|consen 114 GSLFLNLEDEKSFTASSSRGK-EYQFIIKIDDT-------------------FFTKAERS--RIVEPILPRTSFI----- 166 (861)
T ss_pred ccccccccccccccccccCcc-eEEEEEecCch-------------------hhhhhhhh--hhchhhcccccch-----
Confidence 344455667888999999999 99999775440 12233333 6677887776643
Q ss_pred ceEEEEEEecChHHHHHHHHHcccccccccCcccchhhhhhhhh--hcccCCcCCCCCCCCCCCcceeccc--ccccccc
Q psy15512 108 KCVHFTKIHAPWSVLCQYAEELNMRAPLQANVNPILNWSEHLLQ--TLRIPNIMSQDVPNKPTDYFTGPFR--RSKIHKY 183 (786)
Q Consensus 108 ~~~~FvKIhAP~~vL~ryAE~L~lk~Plk~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~t~~F~--~~k~~~F 183 (786)
++..+++||+++.+..++|+...-++|.+.. . ..+.....+. +.+.+ +.-...|.+-....|. ...-..+
T Consensus 167 ~~~~~~gi~~l~~~~~y~aa~plh~g~~~~~-~-~~~~~r~~lyq~wa~~~----~wyk~qpl~~ir~yfg~ki~lyfaw 240 (861)
T KOG2514|consen 167 EQLRRKGIRRLIASGVYEAAFPLHDGEYKAM-Q-GGSVDRYLLYQLWANWE----RWYKFQPLDLIRKYFGEKIALYFAW 240 (861)
T ss_pred hhhhhhchHHHHhhcceeeeeeccccCcccc-c-ccchhHHHHHhcccccC----cccccChHHHHHHhhhHHHHHHHHH
Confidence 3468999999999999999999999888431 1 1111111111 11111 1111112222222222 1112233
Q ss_pred cccCCCcccCChhHHHHHHHHHHhcCccCccccCccccccccccccEEEeeeCCCcccccccC--CCCCCchhHHHHHHH
Q psy15512 184 VGSDNQATFFSNAQRIRIVYEILSTALYGEKRKGEVGVDRLVEEGIFLSAFPLHDGTYYVAKD--HSDQLNPRQVLYEYW 261 (786)
Q Consensus 184 ~~~~~~~~fFt~a~R~rIv~~iL~~~~~~~~~~~~~gi~~Ll~~g~~~~~fPLHd~~~~~~~~--~~~~~~~R~~L~~~W 261 (786)
+| .....++.++.+.+||+.++..+.++.. ..+-..+. +....++|||| ....... +-...+.+.+++..|
T Consensus 241 lg-~yt~~l~~~ai~glivf~yg~~~~~~~~---~~~~~c~~--~~~~t~cplcd-~c~~~~l~~sc~~~~~~~lfdn~~ 313 (861)
T KOG2514|consen 241 LG-TYTTMLWPASIVGLIVFIYGLATLENAP---PSKEICKV--FTNITMCPLCD-MCNYWRLSESCVTAKVTYLFDNPS 313 (861)
T ss_pred HH-HHHHhhhhHHHHHHHHHHHHHHHHhcCC---chHHHHhh--cCcEEeccccc-cccceehHHHHHhhHHHHHhccch
Confidence 32 2446899999999999999999876431 22222333 78899999999 4433322 222345578899999
Q ss_pred hhhccccccCCchhHHhhhcccchhhHHHHHHHHHhhhHHHHHHHHHHhhhheeccCCcchhcccCCCCcccccCCCcCC
Q psy15512 262 ARWGRWYKYQPLSHIREYFGEKIAIYFAWLGFYTGWLLPAAIVGLLVFLYGVVTMNTNRVAHEICTTGDDITMCPLCDKE 341 (786)
Q Consensus 262 a~~~~~~~~QPld~Ir~YFGekIalYFawLgfYT~~L~~~ai~Gl~~~l~g~~~~~~~~~~~eic~~~~~~~mcp~c~~~ 341 (786)
+.|..|+++++.+..++++|+|++.|++|.+.++..+.+++..|.....|+. +.+|
T Consensus 314 tvffavfms~wat~f~e~wkr~~~vl~~~wdl~~~~~~ee~~~~~~~~~~~~---------~~~~--------------- 369 (861)
T KOG2514|consen 314 TVFFAVFMSIWATVFLELWKRKQSVLTYRWDLTGFEEEEEDRPEQFEAKYET---------DPIT--------------- 369 (861)
T ss_pred HHHHHHHHHHhHHHHHHHHHhhheeeeeeeccccccccccccchhhhhhhee---------eccc---------------
Confidence 9999999999999999999999999999999999999999999999988874 1122
Q ss_pred CCcccccccccccchhhccccCCCcchhhHHHHHHHHHHHHHHHhhhhhhhhhccCCCCccccccccCccccccc-Cccc
Q psy15512 342 LGCGYWQLSDICGYAKISYLFDHPGTVFYSVFVSFWAVTFLEYWKRKSASLAHYWDVMGFTDEIERPRPEFAARA-PFQK 420 (786)
Q Consensus 342 ~~c~~w~l~~~c~~~k~~~lfdn~~tv~faif~~lWat~Fle~WKR~~~~la~~Wg~~~~~~~ee~~Rp~f~g~~-~~~~ 420 (786)
+|+.=.++++|..++..+++++..++.+|++++.|.++|++.|++..+..+. ...++...++..++++.... ....
T Consensus 370 -~~~~~~~~~~~~r~~~~l~~~~~v~f~iav~~~~~l~V~lyri~~~~a~~~~--~~~~~~~~~~at~~a~~in~~~i~~ 446 (861)
T KOG2514|consen 370 -NEEDEPISPWRDRYIAMLASFSFVLFMIAVVFSAVLGVILYRISMVAALQCG--KFTTSHAWLSATATAVIINLVVIMI 446 (861)
T ss_pred -CCCCcccCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--ccceehhhhHhHHHHHHHHHHHHHH
Confidence 2444456777899999999999999999999999999999999999988888 66665555556777765422 2346
Q ss_pred ccCCCCceeeccCcccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHH-HHHhhcccChhhhhhhhHHHHHHHHHHHHHHH
Q psy15512 421 INPVTGVKEPSFPKSLRNTRIIAGMGLVFLMISLVFIFILAVIIYRV-LISIPLFQNSALRSFAQTVASVSGAVVNLFLI 499 (786)
Q Consensus 421 ~n~vTg~~e~~~p~~~r~~r~~~s~~~v~~~i~lv~~~v~~vi~yr~-~~~~~~~~~~~~~~~~~~~~s~~~~iln~v~I 499 (786)
+|++-|+++++...+....+....--.++++|+++-.......+|++ .....+.+.+.. +...+.+...-..+--..
T Consensus 447 L~~iy~~~a~~lt~~e~prTe~~~ensl~~KiflfqfvN~yssifYVAFfkg~fvg~pg~--~~~~f~~~r~eeC~p~gC 524 (861)
T KOG2514|consen 447 LNAIYSNLASRLTNLENPRTESEFENSLILKIFLFQFVNYYSSIFYIAFFKGRFVGYPGD--YVYLFGRYRNEECDPGGC 524 (861)
T ss_pred HHHHhhhHHHHHhhhcCccchhhhcchhHHHHHHHHHHHhcCceEEEEEEeceeccCCCC--cceecccceeccccccch
Confidence 78888888887766554443333333445677665443333222211 011111111110 111222222222233334
Q ss_pred HHHHHHHHHHHHHHhcccCCCChhHhhhhhHHHHHHHHHHHhhHHHHHHHHhcCcccCCCCCcch
Q psy15512 500 MAMSNLYEKLALRLTSWEMHRTQTEFDDSLTFKVFIFQFVNYYSSIFYIAFFKGRFVGCPGNYSK 564 (786)
Q Consensus 500 ~il~~iY~~iA~~Lt~~EnhrT~~~ye~sli~K~FlF~FvN~y~slfYiAF~~~~f~g~pg~y~~ 564 (786)
+...-++-.|+..++..+|. +++....++.- +++||.+.=.+-+|+ +..+.+.++++.+-.
T Consensus 525 l~eLciQl~iimlgKq~~nn-~~ev~~P~f~~--~~~~~~~~~~s~~~~-~~~~~~~~~w~~d~~ 585 (861)
T KOG2514|consen 525 LSELCIQLAIIMLGKQIWNN-FMEVGLPKFWK--LIRQYKLKTEARVTI-DDDSANVERWEQDYH 585 (861)
T ss_pred HHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHH--HHHHHhhhccCCCcc-chhhhcccchhhccc
Confidence 45566677788889999999 99999988876 999999999999999 878888777766543
No 5
>PF02714 DUF221: Domain of unknown function DUF221; InterPro: IPR003864 This domain is found in a family of hypothetical transmembrane proteins none of which have any known function, the aligned region is at 538 residues at maximum length.; GO: 0016020 membrane
Probab=98.48 E-value=3.3e-05 Score=84.91 Aligned_cols=218 Identities=19% Similarity=0.229 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCChhHhhhhhHHHHHHHHHHHhhHHHHHHHHhcC---cccCCCCCcch
Q psy15512 488 SVSGAVVNLFLIMAMSNLYEKLALRLTSWEMHRTQTEFDDSLTFKVFIFQFVNYYSSIFYIAFFKG---RFVGCPGNYSK 564 (786)
Q Consensus 488 s~~~~iln~v~I~il~~iY~~iA~~Lt~~EnhrT~~~ye~sli~K~FlF~FvN~y~slfYiAF~~~---~f~g~pg~y~~ 564 (786)
++..+++-.+++.++|.+--.+-.+++++|.|.|.++.|.+...|.|.|+|+|.+.-.....-+.. .+...|++...
T Consensus 102 ~~i~~~lp~l~l~~~~~llp~ii~~ls~~e~~~s~S~~~~sv~~k~f~f~~~n~~lv~~l~~~~~~~~~~~~~~~~~i~~ 181 (325)
T PF02714_consen 102 SLIQGILPSLLLSIFNALLPIIIRFLSKFEGHKSRSEVERSVLRKLFFFLFFNVFLVPSLAGTILSALKNIINNPGSILQ 181 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCcchHHH
Confidence 444455555556667777778888899999999999999999999999999998854332211111 11123444333
Q ss_pred hccccccccCCCccHHHHHHHHHHHHHHHHHHHHHHHhhHH--HHHHHHhhhhhccCCchHHHHHHHHHHHhhccccccc
Q psy15512 565 IWSLRNEDCRTGGCLIELAQQLAVIMIGKQFFNNVKEVGVP--KVKAWFQRKKCRTGGCLIELAQQLAVIMIGKQFFNNV 642 (786)
Q Consensus 565 ~~g~r~e~c~~~gCl~~L~~qL~~imv~kQii~n~~E~~~P--~l~~~~~~~k~~~~g~l~el~~Qla~~~~gkq~~~~~ 642 (786)
..|.. +-.-..-....++.+-++....|.+-| ++...++++...+. +
T Consensus 182 ~l~~~---------lp~~s~ffi~~ii~~~~~~~~~~Ll~~~~l~~~~~~~~~~~~t---------------------~- 230 (325)
T PF02714_consen 182 LLGNF---------LPNSSNFFINYIILQAFIGSPLELLRPPPLIIYYIRRKFFSKT---------------------P- 230 (325)
T ss_pred HHHHH---------hhhhhHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcCCC---------------------H-
Confidence 22210 001111122233333333445555433 23333332211111 0
Q ss_pred cccCcchhhhHHHHhhhhhhhhccchhhhhhccCCCcccchHHHHHHHHHHHHHHHhhhhcchHHHHHHHhhHHHHhhhH
Q psy15512 643 KEVGVPKVKAWFQRKKVQLSKSHLKTRWEKDNHLPINKGLFEEYLEMVLQFGFITIFVAAFPLAPLFALLNNWVEIRLDA 722 (786)
Q Consensus 643 ~E~g~pk~k~~~~~k~~~~s~~~~~~~~e~d~~L~~~~glf~dYlEmviQFGyvtlF~~afPLApl~AllnNiiEiR~Da 722 (786)
++ . .+.+ .+.+++ +.-..|-++..=+-.+.+|++..|+.-.++++-=.+--=+|.
T Consensus 231 -------------r~---~-----~~~~---~~~~~f-~~~~~ya~~l~v~~i~l~ys~i~Plil~~~~~yf~l~y~v~k 285 (325)
T PF02714_consen 231 -------------RE---L-----NELY---TEPPPF-DYGYQYAQMLLVFFIGLFYSPIAPLILPFGLVYFLLKYFVDK 285 (325)
T ss_pred -------------HH---H-----HHhc---CCCCCC-cchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 00 0 0111 122333 344678888888888999999999999999999999999999
Q ss_pred HHHHhhccCCCcccccccchHHHHHHHHHHHHHHHHHhHhhh
Q psy15512 723 QKFLCQTRRVVPERAENIGIWFKILDMLAHLAVISNGFLIAF 764 (786)
Q Consensus 723 ~Kl~~~~rRP~p~ra~~IG~W~~iL~~i~~laVitNa~lIaf 764 (786)
+.+++.++|+.... =..|..+++.+-.--++....++++
T Consensus 286 y~llyvy~~~~es~---G~~~~~~~~~~~~~l~i~q~~~~g~ 324 (325)
T PF02714_consen 286 YNLLYVYRPKYESG---GRLWPTAFNRLLFGLVIFQFTMIGL 324 (325)
T ss_pred hheeeeccCCCCCC---chHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998655222 1478888888887777777777764
No 6
>KOG1134|consensus
Probab=95.96 E-value=0.83 Score=55.77 Aligned_cols=216 Identities=14% Similarity=0.156 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCChhHhhhhhHHHHHHHHHHHhhHHHHH-HHHhcC--cccCCCCC
Q psy15512 485 TVASVSGAVVNLFLIMAMSNLYEKLALRLTSWEMHRTQTEFDDSLTFKVFIFQFVNYYSSIFY-IAFFKG--RFVGCPGN 561 (786)
Q Consensus 485 ~~~s~~~~iln~v~I~il~~iY~~iA~~Lt~~EnhrT~~~ye~sli~K~FlF~FvN~y~slfY-iAF~~~--~f~g~pg~ 561 (786)
.+..++|+++..+++.++ -.+-.+|+.||-|-|.++=|.+...|.|.|+++|.|..-.. -++... .+...|..
T Consensus 409 vI~gfLP~l~l~~~~~~l----P~~l~~ls~~eG~~s~S~~e~~a~~k~~~F~~~nvFl~~~l~~sa~~~~~~~l~~p~~ 484 (728)
T KOG1134|consen 409 VITGFLPTLALVIFLALL----PPFLRYLSKLEGLISRSEEERSALNKYYIFLLVNVFLVVTLSGSALRQLLSILSTPRL 484 (728)
T ss_pred HHHhhhHHHHHHHHHHHH----HHHHHHHHHhcCccchhHHHHHHHHhHHHHHHhhhHHHhhhhHHHHHHHHHHhcCHhH
Confidence 445556666555544444 44556899999999999999999999999999998854221 112110 00001211
Q ss_pred cchhccccccccCCCccHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHhhhhhccCCchHHHHHHHHHHHhhcccc
Q psy15512 562 YSKIWSLRNEDCRTGGCLIELAQQLAVIMIGKQFFNNVKEVG--VPKVKAWFQRKKCRTGGCLIELAQQLAVIMIGKQFF 639 (786)
Q Consensus 562 y~~~~g~r~e~c~~~gCl~~L~~qL~~imv~kQii~n~~E~~--~P~l~~~~~~~k~~~~g~l~el~~Qla~~~~gkq~~ 639 (786)
-.+.++.. +-+-+.-.....+++-..+...|.+ .|++...+++....+. .
T Consensus 485 i~~~la~~---------lP~~a~Ff~~yii~~g~~g~~~ellrl~~Li~~~i~~~~~~~t------------------~- 536 (728)
T KOG1134|consen 485 IPKLLAAA---------LPKQASFFITYIITSGWAGFAGELLRLVPLIIYLLKKLFLKST------------------P- 536 (728)
T ss_pred HHHHHhhh---------ChhhHHHHHHHHHHhccchhhHHHhcchhHHHHHHHHHHcccc------------------h-
Confidence 11111110 0111122344445555667778877 6776655544332211 0
Q ss_pred ccccccCcchhhhHHHHhhhhhhhhccchhhhhhccCCCcccchH-HHHHHHHHHHHHHHhhhhcchHHHHHHHhhHHHH
Q psy15512 640 NNVKEVGVPKVKAWFQRKKVQLSKSHLKTRWEKDNHLPINKGLFE-EYLEMVLQFGFITIFVAAFPLAPLFALLNNWVEI 718 (786)
Q Consensus 640 ~~~~E~g~pk~k~~~~~k~~~~s~~~~~~~~e~d~~L~~~~glf~-dYlEmviQFGyvtlF~~afPLApl~AllnNiiEi 718 (786)
+.++|+-..+..+ -|. .|--+.+=|-.....++.-|+-=.|+++-=.+--
T Consensus 537 ---------------------------~~~~e~~~p~~~~--~~g~~yP~~~~~f~i~i~YsviaPlILpF~lvyF~l~y 587 (728)
T KOG1134|consen 537 ---------------------------RDREERYEPLSSF--YFGTIYPRILLIFTIGICYSVIAPLILPFGLVYFCLAY 587 (728)
T ss_pred ---------------------------hhhhhhcCCcccc--chhhhccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1122222221222 121 2233334344444577888888788888888888
Q ss_pred hhhHHHHHhhccCCCcccccccchHHHHHHHHHHHHHHHHHhHhhh
Q psy15512 719 RLDAQKFLCQTRRVVPERAENIGIWFKILDMLAHLAVISNGFLIAF 764 (786)
Q Consensus 719 R~Da~Kl~~~~rRP~p~ra~~IG~W~~iL~~i~~laVitNa~lIaf 764 (786)
=+|.+-+.+.++.+. .+..|-|-.+..-+-..-++....++++
T Consensus 588 ~vyr~ql~yvy~~~y---es~g~~wp~ih~~ii~~l~l~ql~l~gl 630 (728)
T KOG1134|consen 588 LVYRYQLIYVYNQKY---ESGGRFWPDIHRRIIFGLILFQLILFGL 630 (728)
T ss_pred HHHhhhhheeecccc---cccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998333 5677789998877776666666555543
No 7
>COG5594 Uncharacterized integral membrane protein [Function unknown]
Probab=90.94 E-value=39 Score=41.49 Aligned_cols=62 Identities=16% Similarity=0.149 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCChhHhhhhhHHHHHHHHHHHhhHHHHHHH
Q psy15512 484 QTVASVSGAVVNLFLIMAMSNLYEKLALRLTSWEMHRTQTEFDDSLTFKVFIFQFVNYYSSIFYIA 549 (786)
Q Consensus 484 ~~~~s~~~~iln~v~I~il~~iY~~iA~~Lt~~EnhrT~~~ye~sli~K~FlF~FvN~y~slfYiA 549 (786)
..+..++|+++..+++.++-.++ +||+.|+--.|-++-|....-|.|.|+|+|.|...+..+
T Consensus 462 ~iltglLptv~~~~l~~ivP~fi----r~Ls~~qG~~S~se~E~~~~~k~~~f~fv~~FlV~Tl~s 523 (827)
T COG5594 462 GILTGLLPTVALSLLMSIVPYFI----RWLSYMQGLVSYSEEEIYVQNKYFAFLFVNLFLVVTLAS 523 (827)
T ss_pred HHHHhhhhHHHHHHHHHHhHHHH----HHHHHhcCccchHHHHHHHHhhhhhheeeeehheeeehh
Confidence 44556667776666666665555 588999999999999999999999999999997766555
No 8
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=71.24 E-value=11 Score=27.70 Aligned_cols=31 Identities=29% Similarity=0.641 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCcccCCC
Q psy15512 529 LTFKVFIFQFVNYYSSIFYIAFFKGRFVGCP 559 (786)
Q Consensus 529 li~K~FlF~FvN~y~slfYiAF~~~~f~g~p 559 (786)
+++|+++...|-.|.|||.-+|.-.+-.-.|
T Consensus 2 ~~LK~~Vy~vV~ffv~LFifGflsnDp~RnP 32 (36)
T PF02532_consen 2 LTLKIFVYTVVIFFVSLFIFGFLSNDPGRNP 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCTTSSS
T ss_pred eEEEEeehhhHHHHHHHHhccccCCCCCCCC
Confidence 6899999999999999999999877643333
No 9
>CHL00024 psbI photosystem II protein I
Probab=47.94 E-value=6.7 Score=28.79 Aligned_cols=27 Identities=30% Similarity=0.701 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCcc
Q psy15512 529 LTFKVFIFQFVNYYSSIFYIAFFKGRF 555 (786)
Q Consensus 529 li~K~FlF~FvN~y~slfYiAF~~~~f 555 (786)
+++|+|+...|-.|.|||.-+|.-.+-
T Consensus 2 l~LKi~Vy~vV~ffvsLFifGFlsnDp 28 (36)
T CHL00024 2 LTLKLFVYTVVIFFVSLFIFGFLSNDP 28 (36)
T ss_pred eeEEeeehhHHHHHHHHHHccccCCCC
Confidence 678999999999999999999987663
No 10
>PRK13863 type IV secretion system T-DNA border endonuclease VirD2; Provisional
Probab=46.74 E-value=30 Score=39.09 Aligned_cols=62 Identities=15% Similarity=0.266 Sum_probs=39.7
Q ss_pred cccCC--CcceeEEEEeeecCCCCCC---CC--CCCCCc----chHhhH-HHHHHHHHHHHHHHHcCceEEEEE
Q psy15512 40 YFRDG--RRKIDYVLVYEYVPSGRCS---SS--SSHGSS----SEKKLA-KYENWRTTFMANLERAGLQMEKEV 101 (786)
Q Consensus 40 ~F~Dg--~r~iDfVLvy~~~~~~~~~---~~--~~~~~~----~~~~~~-~~~~~R~~Fe~nL~~~GLelE~e~ 101 (786)
.|.|| ..+.|||+++|++..+-|. .. ....+. ...+.+ .-..+|+.|-+.|++.|++++-..
T Consensus 109 ~FgsG~~G~~~dYV~AlH~D~dHPHVHLvVnrRd~~G~~~lri~~rk~dlNld~~Re~FAE~LRe~GIeaeAT~ 182 (446)
T PRK13863 109 MFGSGAGGGRYNYLTAFHIDRDHPHLHVVVNRRELLGHGWLKISRRHPQLNYDALRIKMAEISLRHGIVLDATS 182 (446)
T ss_pred HhCCCCCCCceeEEEEEecCCCCCeEEEEEEeecCCCCceeeecCCCccccHHHHHHHHHHHHHhcCceeeccc
Confidence 45554 5889999999998874331 00 011110 011111 246899999999999999998763
No 11
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=46.55 E-value=7.2 Score=28.86 Aligned_cols=26 Identities=19% Similarity=0.588 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCc
Q psy15512 529 LTFKVFIFQFVNYYSSIFYIAFFKGR 554 (786)
Q Consensus 529 li~K~FlF~FvN~y~slfYiAF~~~~ 554 (786)
+++|+|+...|-.|.|||.-+|.-.+
T Consensus 2 ltLKi~Vy~vV~ffvsLFiFGflsnD 27 (38)
T PRK02655 2 LALKISVYIVVFFFVGLFVFGFLSSD 27 (38)
T ss_pred eeEEeeehhhHHHHHHHHHcccCCCC
Confidence 68899999999999999999998766
No 12
>PRK01844 hypothetical protein; Provisional
Probab=34.32 E-value=73 Score=27.44 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhh
Q psy15512 447 LVFLMISLVFIFILAVIIYRVLISIPLFQNSALRS 481 (786)
Q Consensus 447 ~v~~~i~lv~~~v~~vi~yr~~~~~~~~~~~~~~~ 481 (786)
+++..++++++++.|.++-|-.+.-.+..||++.+
T Consensus 7 I~l~I~~li~G~~~Gff~ark~~~k~lk~NPpine 41 (72)
T PRK01844 7 ILVGVVALVAGVALGFFIARKYMMNYLQKNPPINE 41 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Confidence 34455677788888888878777766656666544
No 13
>PF04547 Anoctamin: Calcium-activated chloride channel; InterPro: IPR007632 This family contains the anoctamin/TMEM16 proteins which are thought to be calcium-dependent chloride channel [].
Probab=33.62 E-value=7.9e+02 Score=28.28 Aligned_cols=37 Identities=46% Similarity=0.667 Sum_probs=31.7
Q ss_pred chHHHHHHHHHHHhhccccccccccCcchhhhHHHHh
Q psy15512 621 CLIELAQQLAVIMIGKQFFNNVKEVGVPKVKAWFQRK 657 (786)
Q Consensus 621 ~l~el~~Qla~~~~gkq~~~~~~E~g~pk~k~~~~~k 657 (786)
|..++..|+...++++|--+...|..+|.++..++.+
T Consensus 237 ~~~~L~~ql~~~~~~~qi~~~~~e~~~P~~~~~~~~~ 273 (452)
T PF04547_consen 237 CLSRLRIQLFTIMVTKQIINNLLEVVLPYLKKRYRRK 273 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999888888899999887766554
No 14
>PRK00523 hypothetical protein; Provisional
Probab=32.25 E-value=83 Score=27.10 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhh
Q psy15512 446 GLVFLMISLVFIFILAVIIYRVLISIPLFQNSALRS 481 (786)
Q Consensus 446 ~~v~~~i~lv~~~v~~vi~yr~~~~~~~~~~~~~~~ 481 (786)
.+++..++++++++.|.++-|-.+.-.+..||++.+
T Consensus 7 ~I~l~i~~li~G~~~Gffiark~~~k~l~~NPpine 42 (72)
T PRK00523 7 ALGLGIPLLIVGGIIGYFVSKKMFKKQIRENPPITE 42 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcCCCH
Confidence 344456667777888888777777666556666644
No 15
>PRK09371 gas vesicle synthesis protein GvpA; Provisional
Probab=28.81 E-value=2e+02 Score=24.40 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=35.8
Q ss_pred HHHHHHHHcCceEEEEEEeeeccceEEEEEEe---cChHHHHHHHHHcccc
Q psy15512 85 TFMANLERAGLQMEKEVIQTVNKKCVHFTKIH---APWSVLCQYAEELNMR 132 (786)
Q Consensus 85 ~Fe~nL~~~GLelE~e~~~~~~~~~~~FvKIh---AP~~vL~ryAE~L~lk 132 (786)
++++.+.+.|+.+.-+...+--+-.+..++++ |..|...+|||..++-
T Consensus 11 dvldriLDKGiVI~adi~VSl~gieLL~I~lR~viASvet~lkYaea~~~~ 61 (68)
T PRK09371 11 EVIDRILDKGIVVDAWVRVSLVGIELLAIEARVVVASVETYLKYAEAIGLT 61 (68)
T ss_pred HHHHHHccCCeEEEEEEEEEEeeeEEEEEEEEEEEEEhHHHHHHHHHhCcc
Confidence 57888899999998875444322345555554 7999999999999973
No 16
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=27.29 E-value=5.9e+02 Score=28.83 Aligned_cols=27 Identities=37% Similarity=0.669 Sum_probs=16.6
Q ss_pred cCCCCccccccccCcccccccCcccccCCCCce
Q psy15512 396 WDVMGFTDEIERPRPEFAARAPFQKINPVTGVK 428 (786)
Q Consensus 396 Wg~~~~~~~ee~~Rp~f~g~~~~~~~n~vTg~~ 428 (786)
|-+.++--.-|..+|+|. ++||+.|-+
T Consensus 109 ~~q~g~~fs~e~ikP~~~------kinP~~G~K 135 (363)
T COG1377 109 ILQVGFLFSTEALKPKFS------KLNPIKGLK 135 (363)
T ss_pred HHHhCccccccccCCccc------ccChhHHHH
Confidence 333343333357789884 799988753
No 17
>PF09773 Meckelin: Meckelin (Transmembrane protein 67); InterPro: IPR019170 Meckelin is a 995-amino acid seven-transmembrane receptor protein of unknown function []. Members of this family are thought to be related to the ciliary basal body. Defects result in Meckel syndrome type 3, [MIM:607361], an autosomal recessive disorder characterised by a combination of renal cysts and variably associated features including developmental anomalies of the central nervous system (typically encephalocele), hepatic ductal dysplasia and cysts, and polydactyly. Joubert syndrome type 6 [MIM:610688] is also a manifestation of certain mutations; it is an autosomal recessive congenital malformation of the cerebellar vermis and brainstem with abnormalities of axonal decussation (crossing in the brain) affecting the corticospinal tract and superior cerebellar peduncles. Individuals with Joubert syndrome have motor and behavioural abnormalities, including an inability to walk due to severe clumsiness and 'mirror' movements, and cognitive and behavioural disturbances [, ].
Probab=23.70 E-value=1.6e+02 Score=37.17 Aligned_cols=25 Identities=20% Similarity=0.422 Sum_probs=19.5
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhh
Q psy15512 367 TVFYSVFVSFWAVTFLEYWKRKSAS 391 (786)
Q Consensus 367 tv~faif~~lWat~Fle~WKR~~~~ 391 (786)
.++++++..+|+.+=.-.|+||+..
T Consensus 367 l~Vl~~La~~~al~rt~~w~RR~~~ 391 (853)
T PF09773_consen 367 LIVLCVLAFLYALFRTYSWRRRNGS 391 (853)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 3566777778999999999999543
No 18
>KOG3415|consensus
Probab=20.77 E-value=85 Score=29.33 Aligned_cols=17 Identities=12% Similarity=0.456 Sum_probs=13.5
Q ss_pred cchhhHHHHHHHHHHHH
Q psy15512 366 GTVFYSVFVSFWAVTFL 382 (786)
Q Consensus 366 ~tv~faif~~lWat~Fl 382 (786)
+..-||.||+.|-+++.
T Consensus 108 f~asfa~FlvtWIi~Yt 124 (129)
T KOG3415|consen 108 FMASFALFLVTWIIFYT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45569999999988764
No 19
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=20.60 E-value=1.1e+02 Score=23.49 Aligned_cols=22 Identities=41% Similarity=0.563 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy15512 449 FLMISLVFIFILAVIIYRVLIS 470 (786)
Q Consensus 449 ~~~i~lv~~~v~~vi~yr~~~~ 470 (786)
+..++++...+++.++||-++.
T Consensus 14 F~lVglv~i~iva~~iYRKw~a 35 (43)
T PF08114_consen 14 FCLVGLVGIGIVALFIYRKWQA 35 (43)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555556677888987653
No 20
>PF06877 RraB: Regulator of ribonuclease activity B; InterPro: IPR009671 This entry occurs in several hypothetical bacterial proteins of around 120 residues in length. The function of these proteins is unknown. The protein structure has been determined for one member of this group, the hypothetical protein VCO424 from Vibrio cholerae; it has an alpha+beta sandwich fold.; PDB: 1NXI_A.
Probab=20.31 E-value=1.7e+02 Score=26.27 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=23.3
Q ss_pred CCcceeEEEEeeecCCCCCCCCCCCCCcchHhhHHHHHHHHHHHHHHHHcCceEEEEE
Q psy15512 44 GRRKIDYVLVYEYVPSGRCSSSSSHGSSSEKKLAKYENWRTTFMANLERAGLQMEKEV 101 (786)
Q Consensus 44 g~r~iDfVLvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~Fe~nL~~~GLelE~e~ 101 (786)
..|.|||-+++.+ .+.++.|.+.|.+.|.+++...
T Consensus 22 ~~r~ieh~~~f~~-----------------------~~~~~~f~~~~~~~g~~v~~~~ 56 (104)
T PF06877_consen 22 KPRPIEHWFYFED-----------------------EEDAEKFAEELEKLGYEVESAE 56 (104)
T ss_dssp S-EEEEEEEEES------------------------HHHHHHHHHHHHHHS---B---
T ss_pred CCeEEEEEEEeCC-----------------------HHHHHHHHHHHHHCCCEEEEee
Confidence 5789999999943 3677889999999999998753
Done!