BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15514
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P06601|PRD_DROME Segmentation protein paired OS=Drosophila melanogaster GN=prd PE=1
SV=1
Length = 613
Score = 136 bits (343), Expect = 7e-32, Method: Composition-based stats.
Identities = 85/185 (45%), Positives = 101/185 (54%), Gaps = 47/185 (25%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRGHEG---DDTSSEKKLSDGEGSDCDSEPGIPLKRK 61
++LI+EG+CDR +APSVSAISRL+RG + +D SS G+G+ S G +
Sbjct: 127 EKLIREGVCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKASSSCGSDVSGG 186
Query: 62 QRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEGSDCD 121
+ + S + SDC+
Sbjct: 187 HHNN--------------------------------------------GKPSDEDISDCE 202
Query: 122 SEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFI 181
SEPGI LKRKQRR RTTFSA QLDELERAFERTQYPDIYTREELAQRT LTEARIQ F
Sbjct: 203 SEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFS 262
Query: 182 VRKMR 186
R+ R
Sbjct: 263 NRRAR 267
>sp|Q645N4|PAX3A_XENLA Paired box protein Pax-3-A OS=Xenopus laevis GN=pax3-a PE=2 SV=1
Length = 484
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 105/182 (57%), Gaps = 42/182 (23%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRGHEGDDTSSEKKLSDGEGSDCDSEPGIPLKRKQRR 64
D+L+K+G+CDR + PSVS+ISR+LR K G+ D + L RK++
Sbjct: 135 DKLLKDGVCDRNTVPSVSSISRILR----------SKFGKGDEEDME------LDRKEQE 178
Query: 65 SRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEGSDCDSEP 124
+ +D + L +R + P S EGSD DSEP
Sbjct: 179 ESEKRAKHSIDGI-----------------LRERAPVSPE---------SEEGSDIDSEP 212
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
+PLKRKQRRSRTTF+A+QL+ELERAFERT YPDIYTREELAQR KLTEAR+Q F R+
Sbjct: 213 DLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRR 272
Query: 185 MR 186
R
Sbjct: 273 AR 274
>sp|Q0IH87|PAX3B_XENLA Paired box protein Pax-3-B OS=Xenopus laevis GN=pax3-b PE=2 SV=2
Length = 483
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 104/182 (57%), Gaps = 42/182 (23%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRGHEGDDTSSEKKLSDGEGSDCDSEPGIPLKRKQRR 64
D+L+K+G+CDR + PSVS+ISR+LR K G+ D + L RK++
Sbjct: 134 DKLLKDGVCDRNTVPSVSSISRILR----------SKFGKGDEEDME------LDRKEQE 177
Query: 65 SRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEGSDCDSEP 124
+ +D + L +R P S EGSD DSEP
Sbjct: 178 ESEKRAKHSIDGI-----------------LRERAPASPE---------SEEGSDIDSEP 211
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
+PLKRKQRRSRTTF+A+QL+ELERAFERT YPDIYTREELAQR KLTEAR+Q F R+
Sbjct: 212 DLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRR 271
Query: 185 MR 186
R
Sbjct: 272 AR 273
>sp|P24610|PAX3_MOUSE Paired box protein Pax-3 OS=Mus musculus GN=Pax3 PE=1 SV=2
Length = 479
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 102/182 (56%), Gaps = 43/182 (23%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRGHEGDDTSSEKKLSDGEGSDCDSEPGIPLKRKQRR 64
D+L+K+ +CDR + PSVS+ISR+LR K GE + D L+RK+
Sbjct: 135 DKLLKDAVCDRNTVPSVSSISRILR----------SKFGKGEEEEAD------LERKEAE 178
Query: 65 SRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEGSDCDSEP 124
+ +D + ER P S EGSD DSEP
Sbjct: 179 ESEKKAKHSIDGI--LSERASAPQ-------------------------SDEGSDIDSEP 211
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
+PLKRKQRRSRTTF+A+QL+ELERAFERT YPDIYTREELAQR KLTEAR+Q F R+
Sbjct: 212 DLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRR 271
Query: 185 MR 186
R
Sbjct: 272 AR 273
>sp|P23760|PAX3_HUMAN Paired box protein Pax-3 OS=Homo sapiens GN=PAX3 PE=1 SV=2
Length = 479
Score = 133 bits (334), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 102/182 (56%), Gaps = 43/182 (23%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRGHEGDDTSSEKKLSDGEGSDCDSEPGIPLKRKQRR 64
D+L+K+ +CDR + PSVS+ISR+LR K GE + D L+RK+
Sbjct: 135 DKLLKDAVCDRNTVPSVSSISRILR----------SKFGKGEEEEAD------LERKEAE 178
Query: 65 SRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEGSDCDSEP 124
+ +D + ER P S EGSD DSEP
Sbjct: 179 ESEKKAKHSIDGI--LSERASAPQ-------------------------SDEGSDIDSEP 211
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
+PLKRKQRRSRTTF+A+QL+ELERAFERT YPDIYTREELAQR KLTEAR+Q F R+
Sbjct: 212 DLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRR 271
Query: 185 MR 186
R
Sbjct: 272 AR 273
>sp|P47239|PAX7_MOUSE Paired box protein Pax-7 OS=Mus musculus GN=Pax7 PE=2 SV=2
Length = 503
Score = 133 bits (334), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 103/185 (55%), Gaps = 53/185 (28%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLR---GHEGDDTSSEKKLSDGEGSDCDSEPGIPLKRK 61
DRL+K+G CDR + PSVS+ISR+LR G + DD +KK DGE S GI L K
Sbjct: 135 DRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEDDEEGDKKEEDGEKKAKHSIDGI-LGDK 193
Query: 62 QRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEGSDCD 121
R LDE GSD +
Sbjct: 194 GNR---------LDE----------------------------------------GSDVE 204
Query: 122 SEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFI 181
SEP +PLKRKQRRSRTTF+A+QL+ELE+AFERT YPDIYTREELAQRTKLTEAR+Q F
Sbjct: 205 SEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFS 264
Query: 182 VRKMR 186
R+ R
Sbjct: 265 NRRAR 269
>sp|P23759|PAX7_HUMAN Paired box protein Pax-7 OS=Homo sapiens GN=PAX7 PE=2 SV=3
Length = 520
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 79/122 (64%), Gaps = 25/122 (20%)
Query: 5 DRLIKEGLCDRGSAPS--VSAISRLLR-----------------------GHEGDDTSSE 39
DRL+K+G CDR + PS VS+ISR+LR H D +
Sbjct: 135 DRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEADKKEDDGEKKAKHSIDGILGD 194
Query: 40 KKLSDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRT 99
K EGSD +SEP +PLKRKQRRSRTTF+A+QL+ELE+AFERT YPDIYTREELAQRT
Sbjct: 195 KGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 254
Query: 100 KL 101
KL
Sbjct: 255 KL 256
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 63/71 (88%)
Query: 116 EGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEAR 175
EGSD +SEP +PLKRKQRRSRTTF+A+QL+ELE+AFERT YPDIYTREELAQRTKLTEAR
Sbjct: 201 EGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEAR 260
Query: 176 IQTIFIVRKMR 186
+Q F R+ R
Sbjct: 261 VQVWFSNRRAR 271
>sp|Q28DP6|PAX3_XENTR Paired box protein Pax-3 OS=Xenopus tropicalis GN=pax3 PE=2 SV=2
Length = 461
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 63/73 (86%)
Query: 114 SGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTE 173
S EGSD DSEP +PLKRKQRRSRTTF+A+QL+ELERAFERT YPDIYTREELAQR KLTE
Sbjct: 178 SEEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTE 237
Query: 174 ARIQTIFIVRKMR 186
AR+Q F R+ R
Sbjct: 238 ARVQVWFSNRRAR 250
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 46 EGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
EGSD DSEP +PLKRKQRRSRTTF+A+QL+ELERAFERT YPDIYTREELAQR KL
Sbjct: 180 EGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKL 235
>sp|P09083|GSBN_DROME Protein gooseberry-neuro OS=Drosophila melanogaster GN=gsb-n PE=1
SV=2
Length = 449
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 73/105 (69%), Gaps = 11/105 (10%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRGHEGDDTSSEKKLS--------DGEGSDCDSEPGI 56
++LIKEG D PS S+ISRLLRG + K + D + SD +SEPGI
Sbjct: 120 EKLIKEGFAD---PPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGI 176
Query: 57 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
PLKRKQRRSRTTF+A+QL+ LERAF RTQYPD+YTREELAQ T L
Sbjct: 177 PLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTAL 221
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 59/69 (85%)
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SD +SEPGIPLKRKQRRSRTTF+A+QL+ LERAF RTQYPD+YTREELAQ T LTEARIQ
Sbjct: 168 SDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQ 227
Query: 178 TIFIVRKMR 186
F R+ R
Sbjct: 228 VWFSNRRAR 236
>sp|P09082|GSB_DROME Protein gooseberry OS=Drosophila melanogaster GN=gsb PE=2 SV=1
Length = 427
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 9/105 (8%)
Query: 6 RLIKEGLCDRGSAPSVSAISRLLRGHEGDDTSS--EKKLSDGEGS-------DCDSEPGI 56
+LI+ G+CD+ +APSVS+ISRLLRG G TS + L G GS + D+EP +
Sbjct: 120 KLIEAGVCDKQNAPSVSSISRLLRGSSGSGTSHSIDGILGGGAGSVGSEDESEDDAEPSV 179
Query: 57 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
LKRKQRRSRTTFS Q+D LER F RTQYPD+YTREELAQ T L
Sbjct: 180 QLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGL 224
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 54/69 (78%)
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
S+ D+EP + LKRKQRRSRTTFS Q+D LER F RTQYPD+YTREELAQ T LTEAR+Q
Sbjct: 171 SEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Query: 178 TIFIVRKMR 186
F R+ R
Sbjct: 231 VWFSNRRAR 239
>sp|O35085|ARX_MOUSE Homeobox protein ARX OS=Mus musculus GN=Arx PE=2 SV=3
Length = 564
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 6/77 (7%)
Query: 115 GEGSDC-----DSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRT 169
GE S C DSE G+ LKRKQRR RTTF++ QL+ELERAF++T YPD++TREELA R
Sbjct: 309 GEDSVCLSAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 367
Query: 170 KLTEARIQTIFIVRKMR 186
LTEAR+Q F R+ +
Sbjct: 368 DLTEARVQVWFQNRRAK 384
>sp|A6YP92|ARX_RAT Homeobox protein ARX OS=Rattus norvegicus GN=Arx PE=2 SV=1
Length = 566
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 6/77 (7%)
Query: 115 GEGSDC-----DSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRT 169
GE S C DSE G+ LKRKQRR RTTF++ QL+ELERAF++T YPD++TREELA R
Sbjct: 311 GEDSVCLSAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 369
Query: 170 KLTEARIQTIFIVRKMR 186
LTEAR+Q F R+ +
Sbjct: 370 DLTEARVQVWFQNRRAK 386
>sp|Q96QS3|ARX_HUMAN Homeobox protein ARX OS=Homo sapiens GN=ARX PE=1 SV=1
Length = 562
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 6/77 (7%)
Query: 115 GEGSDC-----DSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRT 169
GE S C DSE G+ LKRKQRR RTTF++ QL+ELERAF++T YPD++TREELA R
Sbjct: 307 GEDSVCLSAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 365
Query: 170 KLTEARIQTIFIVRKMR 186
LTEAR+Q F R+ +
Sbjct: 366 DLTEARVQVWFQNRRAK 382
>sp|O42115|ARX_DANRE Aristaless-related homeobox protein OS=Danio rerio GN=arx PE=2 SV=1
Length = 453
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 6/77 (7%)
Query: 115 GEGSDC-----DSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRT 169
GE S C DSE G+ LKRKQRR RTTF++ QL+ELERAF++T YPD++TREELA R
Sbjct: 194 GEDSVCLSAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 252
Query: 170 KLTEARIQTIFIVRKMR 186
LTEAR+Q F R+ +
Sbjct: 253 DLTEARVQVWFQNRRAK 269
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 6/65 (9%)
Query: 42 LSDGEGSDC-----DSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELA 96
+ DGE S C DSE G+ LKRKQRR RTTF++ QL+ELERAF++T YPD++TREELA
Sbjct: 191 VKDGEDSVCLSAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELA 249
Query: 97 QRTKL 101
R L
Sbjct: 250 MRLDL 254
>sp|Q06453|AL_DROME Homeobox protein aristaless OS=Drosophila melanogaster GN=al PE=1
SV=2
Length = 408
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SDC+++ P KRKQRR RTTF++ QL+ELE+AF RT YPD++TREELA + LTEARIQ
Sbjct: 72 SDCEADEYAP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQ 130
Query: 178 TIFIVRKMR 186
F R+ +
Sbjct: 131 VWFQNRRAK 139
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Query: 16 GSAPSVSAISRLLRGHEGDDTSSEKKLSDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLD 75
G APS G G + +SDG SDC+++ P KRKQRR RTTF++ QL+
Sbjct: 50 GGAPS---------GASGASGGTNSPVSDGN-SDCEADEYAP-KRKQRRYRTTFTSFQLE 98
Query: 76 ELERAFERTQYPDIYTREELAQRTKL 101
ELE+AF RT YPD++TREELA + L
Sbjct: 99 ELEKAFSRTHYPDVFTREELAMKIGL 124
>sp|P55864|PAX6_XENLA Paired box protein Pax-6 OS=Xenopus laevis GN=pax6 PE=2 SV=1
Length = 422
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 94/189 (49%), Gaps = 35/189 (18%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRGHEGD--DTSSEK-----KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR D SE ++ +G+ + S PG
Sbjct: 104 DRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGSEGMYDKLRMLNGQTATWGSRPGW- 162
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
T+ Q E +E + + T S+GE
Sbjct: 163 ------YPGTSVPGQPAQE-----------GCQPQEGVGENTNSI---------SSNGED 196
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SD +++ + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA + L EARIQ
Sbjct: 197 SD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 255
Query: 178 TIFIVRKMR 186
F R+ +
Sbjct: 256 VWFSNRRAK 264
>sp|Q26657|ALX_STRPU Aristaless homeobox protein (Fragment) OS=Strongylocentrotus
purpuratus GN=ALX PE=2 SV=2
Length = 327
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 47/60 (78%)
Query: 127 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
P KRKQRR RTTF++ QL+ELERAF +T YPD++TREELA R LTEAR+Q F R+ +
Sbjct: 207 PTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEARVQVWFQNRRAK 266
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 57 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
P KRKQRR RTTF++ QL+ELERAF +T YPD++TREELA R L
Sbjct: 207 PTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDL 251
>sp|P63016|PAX6_RAT Paired box protein Pax-6 OS=Rattus norvegicus GN=Pax6 PE=2 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 35/189 (18%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRG------HEGDDTSSEK-KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR G D +K ++ +G+ + PG
Sbjct: 104 DRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGW- 162
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
+ T P T++ Q+ + I S+GE
Sbjct: 163 -----------------------YPGTSVPGQPTQDGCQQQEGQGENTNSI---SSNGED 196
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SD +++ + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA + L EARIQ
Sbjct: 197 SD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 255
Query: 178 TIFIVRKMR 186
F R+ +
Sbjct: 256 VWFSNRRAK 264
>sp|Q1LZF1|PAX6_BOVIN Paired box protein Pax-6 OS=Bos taurus GN=PAX6 PE=2 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 35/189 (18%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRG------HEGDDTSSEK-KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR G D +K ++ +G+ + PG
Sbjct: 104 DRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGW- 162
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
+ T P T++ Q+ + I S+GE
Sbjct: 163 -----------------------YPGTSVPGQPTQDGCQQQEGGGENTNSI---SSNGED 196
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SD +++ + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA + L EARIQ
Sbjct: 197 SD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 255
Query: 178 TIFIVRKMR 186
F R+ +
Sbjct: 256 VWFSNRRAK 264
>sp|P63015|PAX6_MOUSE Paired box protein Pax-6 OS=Mus musculus GN=Pax6 PE=1 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 35/189 (18%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRG------HEGDDTSSEK-KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR G D +K ++ +G+ + PG
Sbjct: 104 DRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGW- 162
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
+ T P T++ Q+ + I S+GE
Sbjct: 163 -----------------------YPGTSVPGQPTQDGCQQQEGGGENTNSI---SSNGED 196
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SD +++ + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA + L EARIQ
Sbjct: 197 SD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 255
Query: 178 TIFIVRKMR 186
F R+ +
Sbjct: 256 VWFSNRRAK 264
>sp|P26367|PAX6_HUMAN Paired box protein Pax-6 OS=Homo sapiens GN=PAX6 PE=1 SV=2
Length = 422
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 35/189 (18%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRG------HEGDDTSSEK-KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR G D +K ++ +G+ + PG
Sbjct: 104 DRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGW- 162
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
+ T P T++ Q+ + I S+GE
Sbjct: 163 -----------------------YPGTSVPGQPTQDGCQQQEGGGENTNSI---SSNGED 196
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SD +++ + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA + L EARIQ
Sbjct: 197 SD-EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 255
Query: 178 TIFIVRKMR 186
F R+ +
Sbjct: 256 VWFSNRRAK 264
>sp|P26630|PAX6_DANRE Paired box protein Pax-6 OS=Danio rerio GN=pax6a PE=2 SV=1
Length = 437
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRG------HEGDDTSSEK-KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR G D EK ++ +G+ + PG
Sbjct: 123 DRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYEKLRMLNGQTGTWGTRPGW- 181
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
+ T P ++ Q + I S+GE
Sbjct: 182 -----------------------YPGTSVPGQPNQDGCQQSDGGGENTNSI---SSNGED 215
Query: 118 SDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQ 177
SD +++ + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA + L EARIQ
Sbjct: 216 SD-ETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 274
Query: 178 TIFIVRKMR 186
F R+ +
Sbjct: 275 VWFSNRRAK 283
>sp|P47238|PAX6_COTJA Paired box protein Pax-6 OS=Coturnix coturnix japonica GN=PAX6 PE=2
SV=1
Length = 416
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 53/198 (26%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRG------HEGDDTSSEK-KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR G D +K ++ +G+ + PG
Sbjct: 104 DRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGW- 162
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
YP + AQ +Q+ GE
Sbjct: 163 ----------------------------YPGTSVPGQPAQDG--------CPQQEGGGEN 186
Query: 118 SDCDSEPG---------IPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQR 168
++ S G + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA +
Sbjct: 187 TNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAK 246
Query: 169 TKLTEARIQTIFIVRKMR 186
L EARIQ F R+ +
Sbjct: 247 IDLPEARIQVWFSNRRAK 264
>sp|Q26602|SMOX3_SCHMA Homeobox protein SMOX-3 (Fragment) OS=Schistosoma mansoni GN=SMOX-3
PE=2 SV=1
Length = 288
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 45/58 (77%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
KRKQRR RTTF++ QL ELERAF+ T YPDIYTRE+LA R LTEAR+Q F R+ +
Sbjct: 1 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTREDLALRIDLTEARVQVWFQNRRAK 58
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 59 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
KRKQRR RTTF++ QL ELERAF+ T YPDIYTRE+LA R L
Sbjct: 1 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTREDLALRIDL 43
>sp|O73917|PAX6_ORYLA Paired box protein Pax-6 OS=Oryzias latipes GN=pax6 PE=2 SV=1
Length = 437
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 53/198 (26%)
Query: 5 DRLIKEGLCDRGSAPSVSAISRLLRG------HEGDDTSSEK-KLSDGEGSDCDSEPGIP 57
DRL+ EG+C + PSVS+I+R+LR G D +K ++ +G+ + PG
Sbjct: 123 DRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGW- 181
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLFPHFLIIIEQQSSGEG 117
+ T P ++ Q Q +GE
Sbjct: 182 -----------------------YPGTSVPGQPNQDGCQQ-------------QDGAGEN 205
Query: 118 SDCDSEPG---------IPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQR 168
++ S G + LKRK +R+RT+F+ +Q++ LE+ FERT YPD++ RE LA +
Sbjct: 206 TNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAK 265
Query: 169 TKLTEARIQTIFIVRKMR 186
L EARIQ F R+ +
Sbjct: 266 IDLPEARIQVWFSNRRAK 283
>sp|O35690|PHX2B_MOUSE Paired mesoderm homeobox protein 2B OS=Mus musculus GN=Phox2b PE=1
SV=1
Length = 314
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%)
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + LTEAR+Q F R+
Sbjct: 91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 150
Query: 185 MR 186
+
Sbjct: 151 AK 152
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 55 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + L
Sbjct: 91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDL 137
>sp|Q99453|PHX2B_HUMAN Paired mesoderm homeobox protein 2B OS=Homo sapiens GN=PHOX2B PE=1
SV=2
Length = 314
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%)
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + LTEAR+Q F R+
Sbjct: 91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 150
Query: 185 MR 186
+
Sbjct: 151 AK 152
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 55 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + L
Sbjct: 91 GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDL 137
>sp|Q62066|PHX2A_MOUSE Paired mesoderm homeobox protein 2A OS=Mus musculus GN=Phox2a PE=2
SV=1
Length = 280
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%)
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + LTEAR+Q F R+
Sbjct: 83 GLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 142
Query: 185 MR 186
+
Sbjct: 143 AK 144
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 55 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + L
Sbjct: 83 GLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDL 129
>sp|Q62782|PHX2A_RAT Paired mesoderm homeobox protein 2A OS=Rattus norvegicus GN=Phox2a
PE=2 SV=1
Length = 281
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%)
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + LTEAR+Q F R+
Sbjct: 83 GLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 142
Query: 185 MR 186
+
Sbjct: 143 AK 144
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 55 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + L
Sbjct: 83 GLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDL 129
>sp|Q9JLT7|RX_RAT Retinal homeobox protein Rx OS=Rattus norvegicus GN=Rax PE=2 SV=1
Length = 342
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 127 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
P K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F R+ +
Sbjct: 132 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAK 191
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 57 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
P K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L
Sbjct: 132 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNL 176
>sp|O35602|RX_MOUSE Retinal homeobox protein Rx OS=Mus musculus GN=Rax PE=2 SV=2
Length = 342
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 127 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
P K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F R+ +
Sbjct: 131 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAK 190
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 57 PLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
P K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L
Sbjct: 131 PPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNL 175
>sp|O14813|PHX2A_HUMAN Paired mesoderm homeobox protein 2A OS=Homo sapiens GN=PHOX2A PE=1
SV=2
Length = 284
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%)
Query: 125 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRK 184
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + LTEAR+Q F R+
Sbjct: 83 GLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 142
Query: 185 MR 186
+
Sbjct: 143 AK 144
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 55 GIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
G+ KRKQRR RTTF++ QL ELER F T YPDIYTREELA + L
Sbjct: 83 GLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDL 129
>sp|O35137|ALX4_MOUSE Homeobox protein aristaless-like 4 OS=Mus musculus GN=Alx4 PE=1
SV=1
Length = 399
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K K+RR+RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT LTEAR+Q F R+ +
Sbjct: 199 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 256
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 36/43 (83%)
Query: 59 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
K K+RR+RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT L
Sbjct: 199 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDL 241
>sp|Q4LAL6|ALX4_BOVIN Homeobox protein aristaless-like 4 OS=Bos taurus GN=ALX4 PE=2 SV=1
Length = 397
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K K+RR+RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT LTEAR+Q F R+ +
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 254
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 36/43 (83%)
Query: 59 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
K K+RR+RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT L
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDL 239
>sp|Q9H161|ALX4_HUMAN Homeobox protein aristaless-like 4 OS=Homo sapiens GN=ALX4 PE=1
SV=2
Length = 411
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K K+RR+RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT LTEAR+Q F R+ +
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAK 268
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 36/43 (83%)
Query: 59 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
K K+RR+RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT L
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDL 253
>sp|O70137|ALX3_MOUSE Homeobox protein aristaless-like 3 OS=Mus musculus GN=Alx3 PE=2
SV=1
Length = 343
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 7/70 (10%)
Query: 124 PGIP-------LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARI 176
PG+P K K+RR+RTTFS QL+ELE+ F++T YPD+Y RE+LA RT LTEAR+
Sbjct: 138 PGLPDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARV 197
Query: 177 QTIFIVRKMR 186
Q F R+ +
Sbjct: 198 QVWFQNRRAK 207
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 7/55 (12%)
Query: 54 PGIP-------LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
PG+P K K+RR+RTTFS QL+ELE+ F++T YPD+Y RE+LA RT L
Sbjct: 138 PGLPDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDL 192
>sp|O95076|ALX3_HUMAN Homeobox protein aristaless-like 3 OS=Homo sapiens GN=ALX3 PE=1
SV=2
Length = 343
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K K+RR+RTTFS QL+ELE+ F++T YPD+Y RE+LA RT LTEAR+Q F R+ +
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAK 207
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 59 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
K K+RR+RTTFS QL+ELE+ F++T YPD+Y RE+LA RT L
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDL 192
>sp|A6NNA5|DRGX_HUMAN Dorsal root ganglia homeobox protein OS=Homo sapiens GN=DRGX PE=2
SV=1
Length = 263
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 115 GEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEA 174
G S D + G L+RKQRR+RTTF+ QQL+ LE F +T YPD++TREELA + LTEA
Sbjct: 17 GNHSSGDFDDGF-LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
Query: 175 RIQTIFIVRKMR 186
R+Q F R+ +
Sbjct: 76 RVQVWFQNRRAK 87
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 45 GEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
G S D + G L+RKQRR+RTTF+ QQL+ LE F +T YPD++TREELA + L
Sbjct: 17 GNHSSGDFDDGF-LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINL 72
>sp|Q62798|DRGX_RAT Dorsal root ganglia homeobox protein OS=Rattus norvegicus GN=Drgx
PE=2 SV=1
Length = 263
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 128 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
L+RKQRR+RTTF+ QQL+ LE F +T YPD++TREELA + LTEAR+Q F R+ +
Sbjct: 29 LRRKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAK 87
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
L+RKQRR+RTTF+ QQL+ LE F +T YPD++TREELA + L
Sbjct: 29 LRRKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINL 72
>sp|Q9PVX0|RX2_CHICK Retinal homeobox protein Rx2 OS=Gallus gallus GN=RX2 PE=2 SV=1
Length = 317
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F R+ +
Sbjct: 119 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 176
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 37 SSEKKLSDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELA 96
S+ +L G+G D K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA
Sbjct: 97 SASPELPAGDGGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELA 156
Query: 97 QRTKL 101
+ L
Sbjct: 157 MKVNL 161
>sp|Q8BYH0|DRGX_MOUSE Dorsal root ganglia homeobox protein OS=Mus musculus GN=Drgx PE=1
SV=2
Length = 263
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 128 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
L+RKQRR+RTTF+ QQL+ LE F +T YPD++TREELA + LTEAR+Q F R+ +
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAK 87
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 58 LKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
L+RKQRR+RTTF+ QQL+ LE F +T YPD++TREELA + L
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINL 72
>sp|Q9I9A2|RX2_ORYLA Retinal homeobox protein Rx2 OS=Oryzias latipes GN=rx2 PE=2 SV=1
Length = 327
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F R+ +
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNRRAK 191
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 59 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNL 176
>sp|O42356|RX1_DANRE Retinal homeobox protein Rx1 OS=Danio rerio GN=rx1 PE=2 SV=2
Length = 330
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 121 DSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIF 180
DS G K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F
Sbjct: 126 DSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 185
Query: 181 IVRKMR 186
R+ +
Sbjct: 186 QNRRAK 191
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 51 DSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
DS G K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L
Sbjct: 126 DSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNL 176
>sp|Q91574|ALX1_XENLA ALX homeobox protein 1 OS=Xenopus laevis GN=alx1 PE=2 SV=1
Length = 335
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 117 GSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARI 176
G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT+LTEAR+
Sbjct: 129 GDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 185
Query: 177 QTIFIVRKMR 186
Q F R+ +
Sbjct: 186 QVWFQNRRAK 195
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 44 DGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
D G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT+L
Sbjct: 126 DELGDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTEL 180
>sp|Q8C8B0|ALX1_MOUSE ALX homeobox protein 1 OS=Mus musculus GN=Alx1 PE=1 SV=1
Length = 326
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 117 GSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARI 176
G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT+LTEAR+
Sbjct: 120 GDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 177 QTIFIVRKMR 186
Q F R+ +
Sbjct: 177 QVWFQNRRAK 186
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 39 EKKLSDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQR 98
EK D G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA R
Sbjct: 112 EKSELDELGDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALR 168
Query: 99 TKL 101
T+L
Sbjct: 169 TEL 171
>sp|Q15699|ALX1_HUMAN ALX homeobox protein 1 OS=Homo sapiens GN=ALX1 PE=1 SV=2
Length = 326
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 117 GSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARI 176
G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT+LTEAR+
Sbjct: 120 GDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 177 QTIFIVRKMR 186
Q F R+ +
Sbjct: 177 QVWFQNRRAK 186
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 39 EKKLSDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQR 98
EK D G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA R
Sbjct: 112 EKGELDELGDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALR 168
Query: 99 TKL 101
T+L
Sbjct: 169 TEL 171
>sp|Q63087|ALX1_RAT ALX homeobox protein 1 OS=Rattus norvegicus GN=Alx1 PE=2 SV=1
Length = 326
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 117 GSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARI 176
G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA RT+LTEAR+
Sbjct: 120 GDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 177 QTIFIVRKMR 186
Q F R+ +
Sbjct: 177 QVWFQNRRAK 186
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 39 EKKLSDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQR 98
EK D G CDS K+RR RTTF++ QL+ELE+ F++T YPD+Y RE+LA R
Sbjct: 112 EKSELDELGDKCDSNVS---SSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALR 168
Query: 99 TKL 101
T+L
Sbjct: 169 TEL 171
>sp|O42357|RX2_DANRE Retinal homeobox protein Rx2 OS=Danio rerio GN=rx2 PE=2 SV=1
Length = 327
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F R+ +
Sbjct: 132 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 189
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 59 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L
Sbjct: 132 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNL 174
>sp|O42567|RXB_XENLA Retinal homeobox protein Rx-B OS=Xenopus laevis GN=rax-b PE=2 SV=2
Length = 325
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F R+ +
Sbjct: 127 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 184
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 43 SDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
SD + SD + +P K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L
Sbjct: 115 SDNKLSDDEQQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNL 169
>sp|O42201|RXA_XENLA Retinal homeobox protein Rx-A OS=Xenopus laevis GN=rax-a PE=2 SV=2
Length = 322
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 129 KRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQTIFIVRKMR 186
K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L E R+Q F R+ +
Sbjct: 127 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 184
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 43 SDGEGSDCDSEPGIPLKRKQRRSRTTFSAQQLDELERAFERTQYPDIYTREELAQRTKL 101
SD + SD + +P K+K RR+RTTF+ QL ELERAFE++ YPD+Y+REELA + L
Sbjct: 115 SDNKLSDDEQQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNL 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,984,644
Number of Sequences: 539616
Number of extensions: 2677495
Number of successful extensions: 10553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 8708
Number of HSP's gapped (non-prelim): 1787
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)