BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15515
(242 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307174131|gb|EFN64789.1| Protein boule [Camponotus floridanus]
Length = 898
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 112/150 (74%), Gaps = 8/150 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI+++T+E EL +LFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 117 APKYGTLVPNRIFVGGISASTSEAELAQLFSAYGNVKATKIISDRAGVSKGYGFVTFETE 176
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++++ I+ +E++LNIAPAIKKQ F+ ++D + SP P VPTS YY NG+
Sbjct: 177 EEAKRLQQEAECIVLRERKLNIAPAIKKQPFSRSFDG--STGSP-PSVPTSTYYYANGMG 233
Query: 155 YTYHNGMAFF----PSNGQSMV-PTSPPTV 179
Y NGM F+ P+ S+ PT P T+
Sbjct: 234 LAYQNGMTFYNTAAPAPATSIAPPTDPGTI 263
>gi|242023530|ref|XP_002432185.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517582|gb|EEB19447.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 289
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 112/154 (72%), Gaps = 10/154 (6%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF 91
NNNAPKYGT VP R+FVGGI++ TTE EL +LFS +G VK KI+ DRAG+SKGYGF+TF
Sbjct: 79 NNNAPKYGTPVPNRIFVGGISAQTTESELAQLFSSFGTVKGTKIIFDRAGVSKGYGFVTF 138
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
++E EA+R+ +++ ++MFK+++LNIAPAIKKQ F+ + + V SP +P++ M Y N
Sbjct: 139 ETEMEARRIMREAQSVMFKQRKLNIAPAIKKQPFSRSLE----VQSPPIGIPSTVM-YAN 193
Query: 152 GLPYTYHNGMAFF-----PSNGQSMVPTSPPTVP 180
G PY +HNGMAFF PSN Q+ P VP
Sbjct: 194 GSPYVFHNGMAFFSPPEPPSNFQAAPSNQIPAVP 227
>gi|415666336|dbj|BAM66420.1| boule-2 [Athalia rosae]
gi|415666340|dbj|BAM66421.1| boule-2 [Athalia rosae]
Length = 793
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 110/148 (74%), Gaps = 4/148 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI+++T+E EL +LFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 28 APKYGTLVPNRIFVGGISASTSEAELAQLFSTYGNVKGTKIISDRAGVSKGYGFVTFETE 87
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F ++D + SP P VPTS YY NG+
Sbjct: 88 EEAKRLQQESECIVLRERKLNIAPAIKKQLFNRSFDG--SSGSP-PAVPTSTYYYTNGMG 144
Query: 155 YTYHNGMAFFPSNGQS-MVPTSPPTVPT 181
Y NGM F+ + G + P +P PT
Sbjct: 145 LAYQNGMTFYNTGGPAPATPVAPQADPT 172
>gi|332031346|gb|EGI70859.1| Protein boule [Acromyrmex echinatior]
Length = 864
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 103/130 (79%), Gaps = 3/130 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI+++T+E EL ++FS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 118 APKYGTLVPNRIFVGGISASTSEAELAQVFSAYGNVKATKIISDRAGVSKGYGFVTFETE 177
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++++ I+ +E++LNIAPAIKKQ F+ ++D + SP P VPTS YY NG+
Sbjct: 178 EEAKRLQQEAECIVLRERKLNIAPAIKKQPFSRSFDG--STGSP-PSVPTSTYYYANGMG 234
Query: 155 YTYHNGMAFF 164
Y NGM F+
Sbjct: 235 LAYQNGMTFY 244
>gi|415666332|dbj|BAM66419.1| boule [Athalia rosae]
gi|415666341|dbj|BAM66422.1| boule [Athalia rosae]
Length = 487
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 110/148 (74%), Gaps = 4/148 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI+++T+E EL +LFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 28 APKYGTLVPNRIFVGGISASTSEAELAQLFSTYGNVKGTKIISDRAGVSKGYGFVTFETE 87
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F ++D + SP P VPTS YY NG+
Sbjct: 88 EEAKRLQQESECIVLRERKLNIAPAIKKQLFNRSFDG--SSGSP-PAVPTSTYYYTNGMG 144
Query: 155 YTYHNGMAFFPSNGQS-MVPTSPPTVPT 181
Y NGM F+ + G + P +P PT
Sbjct: 145 LAYQNGMTFYNTGGPAPATPVAPQADPT 172
>gi|350398436|ref|XP_003485194.1| PREDICTED: hypothetical protein LOC100746802 [Bombus impatiens]
Length = 837
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 99/130 (76%), Gaps = 3/130 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI++ T+ +EL ELFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 28 APKYGTLVPNRIFVGGISANTSVEELAELFSSYGNVKATKIIADRAGVSKGYGFVTFETE 87
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F SL + P VPTS YY NG+
Sbjct: 88 EEAKRLQQESECIVLRERKLNIAPAIKKQPFN---RSLDGGSGSPPSVPTSTYYYPNGMG 144
Query: 155 YTYHNGMAFF 164
TY NGM F+
Sbjct: 145 LTYQNGMTFY 154
>gi|307195677|gb|EFN77519.1| Protein boule [Harpegnathos saltator]
Length = 249
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI+++T+E EL +LFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 30 APKYGTLVPNRIFVGGISASTSEAELAQLFSAYGNVKATKIISDRAGVSKGYGFVTFETE 89
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F ++D SP P VPTS YY NG+
Sbjct: 90 EEAKRLQQESECIVLRERKLNIAPAIKKQPFNRSFDG--GSGSP-PSVPTSTYYYTNGMG 146
Query: 155 YTYHNGMAFF----PSNGQSMVPTSPP 177
Y NGM F+ P+ S+ P + P
Sbjct: 147 LAYQNGMTFYNTAAPAPATSIAPPTDP 173
>gi|340725086|ref|XP_003400905.1| PREDICTED: hypothetical protein LOC100642467 [Bombus terrestris]
Length = 837
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 99/130 (76%), Gaps = 3/130 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI++ T+ +EL ELFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 28 APKYGTLVPNRIFVGGISANTSVEELAELFSSYGNVKATKIIADRAGVSKGYGFVTFETE 87
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F SL + P VPTS YY NG+
Sbjct: 88 EEAKRLQQESECIVLRERKLNIAPAIKKQPFN---RSLDGGSGSPPSVPTSTYYYPNGMG 144
Query: 155 YTYHNGMAFF 164
TY NGM F+
Sbjct: 145 LTYQNGMTFY 154
>gi|383865757|ref|XP_003708339.1| PREDICTED: uncharacterized protein LOC100876378 [Megachile
rotundata]
Length = 858
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 102/130 (78%), Gaps = 3/130 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI++ T+ +EL +LFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 118 APKYGTLVPNRIFVGGISANTSVEELAQLFSTYGNVKATKIISDRAGVSKGYGFVTFETE 177
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F ++D SP P VPTS+ Y+ NG+
Sbjct: 178 EEAKRLQQESECIVLRERKLNIAPAIKKQPFNRSFDG--GSGSP-PSVPTSSYYFANGMG 234
Query: 155 YTYHNGMAFF 164
TY NGM F+
Sbjct: 235 LTYQNGMTFY 244
>gi|380021184|ref|XP_003694451.1| PREDICTED: uncharacterized protein LOC100869829 [Apis florea]
Length = 846
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 99/130 (76%), Gaps = 3/130 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI++ T+ +EL +LFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 126 APKYGTLVPNRIFVGGISANTSVEELAQLFSSYGNVKATKIIADRAGVSKGYGFVTFETE 185
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F SL + P VPTS YY NG+
Sbjct: 186 EEAKRLQQESECIVLRERKLNIAPAIKKQPFN---RSLDGGSGSPPSVPTSTYYYPNGMG 242
Query: 155 YTYHNGMAFF 164
TY NGM F+
Sbjct: 243 LTYQNGMTFY 252
>gi|328782902|ref|XP_003250213.1| PREDICTED: hypothetical protein LOC726928 [Apis mellifera]
Length = 856
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 99/130 (76%), Gaps = 3/130 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT+VP R+FVGGI++ T+ +EL +LFS YG VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 118 APKYGTLVPNRIFVGGISANTSVEELAQLFSSYGNVKATKIIADRAGVSKGYGFVTFETE 177
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
EEAKRLQ++S+ I+ +E++LNIAPAIKKQ F SL + P VPTS YY NG+
Sbjct: 178 EEAKRLQQESECIVLRERKLNIAPAIKKQPFN---RSLDGGSGSPPSVPTSTYYYPNGMG 234
Query: 155 YTYHNGMAFF 164
TY NGM F+
Sbjct: 235 LTYQNGMTFY 244
>gi|322797544|gb|EFZ19588.1| hypothetical protein SINV_06536 [Solenopsis invicta]
Length = 223
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 102/131 (77%), Gaps = 4/131 (3%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APK+GT+VP RVFVGGI+++T+E EL ++FS +G VK KI+ DRAG+SKGYGF+TF++E
Sbjct: 3 APKFGTLVPNRVFVGGISASTSEAELAQVFSAFGNVKATKIISDRAGVSKGYGFVTFETE 62
Query: 95 EEAKRLQKDS-DNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
EEAKRLQ++S I+ +E++LNIAPAIKKQ F+ ++D + SP P VPTS YY NG+
Sbjct: 63 EEAKRLQQESVQPIVLRERKLNIAPAIKKQPFSRSFDG--STGSP-PSVPTSTYYYANGM 119
Query: 154 PYTYHNGMAFF 164
Y NGM F+
Sbjct: 120 GLAYQNGMTFY 130
>gi|189238408|ref|XP_972674.2| PREDICTED: similar to AGAP005506-PA [Tribolium castaneum]
Length = 255
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 9/154 (5%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
KYGT+VP R+FVGGI++ TTE EL +LFS YG VK KI+ DRAG+SKGYGFITF+SE++
Sbjct: 48 KYGTLVPNRIFVGGISANTTEGELLQLFSSYGTVKAAKIIQDRAGVSKGYGFITFESEDD 107
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSL-PTVTSP-------VPPVPTSNMY 148
AKR KD+DNI+ KE++LNIAPAIKKQ F +D+ P+ +P PP P Y
Sbjct: 108 AKRPLKDADNIVLKERKLNIAPAIKKQPFNRAFDAASPSTVAPGNTAQYFFPPSP-GVPY 166
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVPTSPPTVPTQ 182
+ G+ Y A N Q+ V +PP P Q
Sbjct: 167 FQGGVTYYQQPPAAPGDPNSQTTVYQAPPVYPAQ 200
>gi|354484433|ref|XP_003504392.1| PREDICTED: hypothetical protein LOC100772853 [Cricetulus griseus]
Length = 735
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 472 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 531
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 532 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 585
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 586 TSTGYPYTYHNGVAYF 601
>gi|403267342|ref|XP_003925796.1| PREDICTED: protein boule-like [Saimiri boliviensis boliviensis]
Length = 554
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 102/155 (65%), Gaps = 16/155 (10%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
SSNP SP N +AP+YGTV+P R+FVGGI T E +L + FSQYG
Sbjct: 280 SSNPVSPVPLNNP----------TSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGS 329
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
VK+VKIV DRAG+SKGYGFITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +
Sbjct: 330 VKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGISR 389
Query: 130 DSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
S+ +P T + G PYTYHNG+A+F
Sbjct: 390 SSI------MPAAGTMYLTTSTGYPYTYHNGVAYF 418
>gi|270009231|gb|EFA05679.1| boule [Tribolium castaneum]
Length = 638
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 13/159 (8%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
KYGT+VP R+FVGGI++ TTE EL +LFS YG VK KI+ DRAG+SKGYGFITF+SE++
Sbjct: 48 KYGTLVPNRIFVGGISANTTEGELLQLFSSYGTVKAAKIIQDRAGVSKGYGFITFESEDD 107
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKK----QGFTGTYDSL-PTVTSP-------VPPVPT 144
AKR KD+DNI+ KE++LNIAPAIKK Q F +D+ P+ +P PP P
Sbjct: 108 AKRPLKDADNIVLKERKLNIAPAIKKQVSCQPFNRAFDAASPSTVAPGNTAQYFFPPSPG 167
Query: 145 SNMYYHNGLPYTYHNGMAFFPSNGQSMVPTSPPTVPTQV 183
Y+ G+ Y A N Q+ V +PP P Q
Sbjct: 168 V-PYFQGGVTYYQQPPAAPGDPNSQTTVYQAPPVYPAQT 205
>gi|296205180|ref|XP_002749734.1| PREDICTED: protein boule-like [Callithrix jacchus]
Length = 531
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 102/155 (65%), Gaps = 16/155 (10%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
SSNP SP N +AP+YGTV+P R+FVGGI T E +L + FSQYG
Sbjct: 257 SSNPVSPVPLNNP----------TSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGS 306
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
VK+VKIV DRAG+SKGYGFITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +
Sbjct: 307 VKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGISR 366
Query: 130 DSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
S+ +P T + G PYTYHNG+A+F
Sbjct: 367 SSI------MPAAGTMYLTTSTGYPYTYHNGVAYF 395
>gi|348555193|ref|XP_003463408.1| PREDICTED: protein boule-like [Cavia porcellus]
Length = 322
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 108/166 (65%), Gaps = 13/166 (7%)
Query: 6 PSEGSSNPSSPSSTQNNA-----FFNYQAAVNN--NAPKYGTVVPKRVFVGGITSTTTED 58
PS GS +P +S Q +NN +AP+YGTV+P R+FVGGI T E+
Sbjct: 27 PSSGSQDPGIQTSNQTQTDSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNEN 86
Query: 59 ELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAP 118
+L + FSQYG VK+VKIV DRAG+SKGYGF+TF+++E+A+++ ++++ + +K+K+LNI P
Sbjct: 87 DLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGP 146
Query: 119 AIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
AI+KQ + S+ +P T + G PYTYHNG+A+F
Sbjct: 147 AIRKQQVGISRSSV------MPAAGTMYLTTSTGYPYTYHNGVAYF 186
>gi|49609411|emb|CAG30559.1| BOULE protein [Saimiri sciureus]
Length = 283
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 102/155 (65%), Gaps = 16/155 (10%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
SSNP SP N +AP+YGTV+P R+FVGGI T E +L + FSQYG
Sbjct: 9 SSNPVSPVPLNNP----------TSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGS 58
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
VK+VKIV DRAG+SKGYGFITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +
Sbjct: 59 VKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGISR 118
Query: 130 DSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
S+ +P T + G PYTYHNG+A+F
Sbjct: 119 SSI------MPAAGTMYLTTSTGYPYTYHNGVAYF 147
>gi|350593751|ref|XP_003483759.1| PREDICTED: boule [Sus scrofa]
Length = 293
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 98/133 (73%), Gaps = 6/133 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+R+ ++++ + +K+K+LNI PAI+KQ +P +S +P T + G
Sbjct: 95 QEDAQRILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFFPS 166
PYTYHNG+A+F S
Sbjct: 149 PYTYHNGVAYFHS 161
>gi|301769293|ref|XP_002920065.1| PREDICTED: protein boule-like [Ailuropoda melanoleuca]
Length = 295
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 102/155 (65%), Gaps = 16/155 (10%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
SSNP SP N +AP+YGTV+P R+FVGGI T E++L + FSQYG
Sbjct: 21 SSNPVSPVPLNNP----------TSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGS 70
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
VK+VKIV DRAG+SKGYGFITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ
Sbjct: 71 VKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPR 130
Query: 130 DSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
S+ +P T + G PYTYHNG+A+F
Sbjct: 131 SSI------MPAAGTMYLTTSTGYPYTYHNGVAYF 159
>gi|49609409|emb|CAG30558.1| BOULE protein [Callithrix jacchus]
Length = 283
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 102/155 (65%), Gaps = 16/155 (10%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
SSNP SP N +AP+YGTV+P R+FVGGI T E +L + FSQYG
Sbjct: 9 SSNPVSPVPLNNP----------TSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGS 58
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
VK+VKIV DRAG+SKGYGFITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +
Sbjct: 59 VKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGISR 118
Query: 130 DSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
S+ +P T + G PYTYHNG+A+F
Sbjct: 119 SSI------MPAAGTMYLTTSTGYPYTYHNGVAYF 147
>gi|158294274|ref|XP_315505.3| AGAP005506-PA [Anopheles gambiae str. PEST]
gi|157015488|gb|EAA11746.3| AGAP005506-PA [Anopheles gambiae str. PEST]
Length = 186
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 96/156 (61%), Gaps = 10/156 (6%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P RVFVGGI+ TTE ELC LFS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 17 APKYGTLIPNRVFVGGISGDTTEAELCRLFSSYGNVKSTKIIVDRAGVSKGYGFVTFETE 76
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN-------- 146
EA++LQ D D I+ ++++LNIAPAIKKQ T ++ + PP P N
Sbjct: 77 HEAQKLQNDCDCIVLRDRKLNIAPAIKKQTLCATNGAV--YYAATPPTPAINNIPIEQFA 134
Query: 147 MYYHNGLPYTYHNGMAFFPSNGQSMVPTSPPTVPTQ 182
Y G+P Y + + P VP P P Q
Sbjct: 135 TVYPPGVPTMYPPTLPYQPFYQYYSVPMVPNAFPPQ 170
>gi|49609407|emb|CAG30557.1| BOULE protein [Saguinus oedipus]
Length = 283
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 101/155 (65%), Gaps = 16/155 (10%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
SSNP SP N +AP+YGTV+P R+FVGGI T E +L + FSQYG
Sbjct: 9 SSNPESPVPLNNP----------TSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGS 58
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
VK+VKIV DRAG+SKGYGFITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +
Sbjct: 59 VKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGISR 118
Query: 130 DSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
+ +P T + G PYTYHNG+A+F
Sbjct: 119 SGI------MPAAGTMYLTTSTGYPYTYHNGVAYF 147
>gi|49609417|emb|CAG34241.1| BOULE protein [Microcebus murinus]
Length = 283
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ SL +P T +
Sbjct: 78 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSL------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|256593459|gb|ACV03665.1| Boule isoform a [Rousettus leschenaultii]
Length = 283
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|256593461|gb|ACV03666.1| Boule isoform b [Rousettus leschenaultii]
Length = 250
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 95/131 (72%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGFITF++
Sbjct: 23 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFET 82
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T + G
Sbjct: 83 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLTTSTGY 136
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 137 PYTYHNGVAYF 147
>gi|256593451|gb|ACV03661.1| Boule isoform a [Myotis ricketti]
gi|256593455|gb|ACV03663.1| Boule isoform a [Rhinolophus ferrumequinum]
Length = 283
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|312375188|gb|EFR22608.1| hypothetical protein AND_14464 [Anopheles darlingi]
Length = 285
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P RVFVGGI+ TTE ELC LFS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 114 APKYGTLIPNRVFVGGISGDTTEAELCRLFSSYGNVKSTKIIVDRAGVSKGYGFVTFETE 173
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
EA++LQ D D I+ ++++LNIAPAIKKQ T ++ + PP P N
Sbjct: 174 HEAQKLQNDCDCIVLRDRKLNIAPAIKKQTICATNGAV--YYAATPPTPAIN 223
>gi|327284643|ref|XP_003227046.1| PREDICTED: protein boule-like [Anolis carolinensis]
Length = 394
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP++GTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 85 LNNPTSAPRFGTVIPNRIFVGGIDFKTNENDLRKFFSQYGCVKEVKIVNDRAGVSKGYGF 144
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 145 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 198
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVPTSPPT 178
G PYTYHNG+A+F + + VP P+
Sbjct: 199 TSTGYPYTYHNGVAYFHTPEITSVPQPWPS 228
>gi|344268292|ref|XP_003405995.1| PREDICTED: protein boule-like [Loxodonta africana]
Length = 311
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 106/150 (70%), Gaps = 8/150 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T +
Sbjct: 90 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVPTSPPT 178
G PYTYHNG+A+F + + VP P+
Sbjct: 144 TSTGYPYTYHNGVAYFHTPEVTSVPPPWPS 173
>gi|256593453|gb|ACV03662.1| Boule isoform b [Myotis ricketti]
Length = 250
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 95/131 (72%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 23 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 82
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T + G
Sbjct: 83 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLTTSTGY 136
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 137 PYTYHNGVAYF 147
>gi|270271227|gb|ACZ67145.1| boule protein transcript variant 2 [Bos taurus]
Length = 271
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 101/140 (72%), Gaps = 6/140 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T + G
Sbjct: 95 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFFPSNGQSMVP 173
PYTYHNG+A+F + + VP
Sbjct: 149 PYTYHNGVAYFHTPEVTSVP 168
>gi|154982967|gb|ABS89140.1| boule [Bos taurus]
Length = 293
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 95/131 (72%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T + G
Sbjct: 95 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 149 PYTYHNGVAYF 159
>gi|256593447|gb|ACV03659.1| Boule isoform a [Eonycteris spelaea]
Length = 273
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVPTSPPT 178
G PYTYHNG+A+F + + VP P+
Sbjct: 132 TSTGYPYTYHNGVAYFHTPEVTSVPPPWPS 161
>gi|426221298|ref|XP_004004847.1| PREDICTED: protein boule-like isoform 1 [Ovis aries]
Length = 295
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 95/131 (72%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T + G
Sbjct: 95 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 149 PYTYHNGVAYF 159
>gi|225698220|gb|ACO07307.1| boule [Bos taurus]
gi|296490441|tpg|DAA32554.1| TPA: boule isoform 1 [Bos taurus]
Length = 295
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 95/131 (72%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T + G
Sbjct: 95 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 149 PYTYHNGVAYF 159
>gi|426221302|ref|XP_004004849.1| PREDICTED: protein boule-like isoform 3 [Ovis aries]
Length = 271
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 97/131 (74%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T + G
Sbjct: 95 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 149 PYTYHNGVAYF 159
>gi|345797638|ref|XP_545580.3| PREDICTED: protein boule-like isoform 2 [Canis lupus familiaris]
Length = 295
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|148667615|gb|EDL00032.1| bol, boule-like (Drosophila), isoform CRA_b [Mus musculus]
Length = 343
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN + P+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 80 LNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 139
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ SL +P T +
Sbjct: 140 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSL------MPAAGTMYLT 193
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 194 TSTGYPYTYHNGVAYF 209
>gi|390979698|gb|AFM30908.1| boule [Capra hircus]
Length = 255
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 97/131 (74%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T + G
Sbjct: 95 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 149 PYTYHNGVAYF 159
>gi|157122907|ref|XP_001659950.1| boule protein, putative [Aedes aegypti]
gi|108882950|gb|EAT47175.1| AAEL001684-PA [Aedes aegypti]
Length = 181
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 75/89 (84%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P RVFVGGI+ TTE ELC LFS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 16 APKYGTLIPNRVFVGGISGDTTEAELCRLFSSYGNVKSTKIIVDRAGVSKGYGFVTFETE 75
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
EA+RLQ D D I+ ++++LNIAPAIKKQ
Sbjct: 76 HEAQRLQSDGDCIVLRDRKLNIAPAIKKQ 104
>gi|395861524|ref|XP_003803032.1| PREDICTED: protein boule-like [Otolemur garnettii]
Length = 295
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|291391984|ref|XP_002712315.1| PREDICTED: boule-like [Oryctolagus cuniculus]
Length = 318
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 102/145 (70%), Gaps = 8/145 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E++L + FSQYG +K+VKIV DRAG+SKGYGF
Sbjct: 55 LNNPTSAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSIKEVKIVNDRAGVSKGYGF 114
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 115 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 168
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVP 173
G PYTYHNG+A+F + + VP
Sbjct: 169 TSTGYPYTYHNGVAYFHTPEVTSVP 193
>gi|164565415|ref|NP_083543.2| protein boule-like isoform 1 [Mus musculus]
Length = 293
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN + P+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ SL +P T +
Sbjct: 90 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSL------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|21752331|dbj|BAC04171.1| unnamed protein product [Homo sapiens]
Length = 339
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 103/145 (71%), Gaps = 8/145 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 83
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T +
Sbjct: 84 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLT 137
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVP 173
G PYTYHNG+A+F + + VP
Sbjct: 138 TSTGYPYTYHNGVAYFHTPEVTSVP 162
>gi|119590577|gb|EAW70171.1| bol, boule-like (Drosophila), isoform CRA_a [Homo sapiens]
Length = 339
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 103/145 (71%), Gaps = 8/145 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 83
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T +
Sbjct: 84 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLT 137
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVP 173
G PYTYHNG+A+F + + VP
Sbjct: 138 TSTGYPYTYHNGVAYFHTPEVTSVP 162
>gi|14578838|gb|AAK69026.1| boule [Mus musculus]
Length = 297
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN + P+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 34 LNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 93
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ SL +P T +
Sbjct: 94 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSL------MPAAGTMYLT 147
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 148 TSTGYPYTYHNGVAYF 163
>gi|402889003|ref|XP_003907822.1| PREDICTED: protein boule-like [Papio anubis]
Length = 202
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 99/139 (71%), Gaps = 6/139 (4%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF+TF+++
Sbjct: 36 APRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQ 95
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T + G P
Sbjct: 96 EDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLTTSTGYP 149
Query: 155 YTYHNGMAFFPSNGQSMVP 173
YTYHNG+A+F + + VP
Sbjct: 150 YTYHNGVAYFHTPEVTSVP 168
>gi|426338148|ref|XP_004033051.1| PREDICTED: protein boule-like isoform 1 [Gorilla gorilla gorilla]
Length = 292
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 101/145 (69%), Gaps = 8/145 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 27 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 86
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 87 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 140
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVP 173
G PYTYHNG+A+F + + VP
Sbjct: 141 TSTGYPYTYHNGVAYFHTPEVTSVP 165
>gi|355750727|gb|EHH55054.1| hypothetical protein EGM_04185 [Macaca fascicularis]
Length = 295
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|302563755|ref|NP_001180724.1| protein boule-like [Macaca mulatta]
Length = 295
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|148667614|gb|EDL00031.1| bol, boule-like (Drosophila), isoform CRA_a [Mus musculus]
Length = 358
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN + P+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 95 LNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 154
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ SL +P T +
Sbjct: 155 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSL------MPAAGTMYLT 208
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 209 TSTGYPYTYHNGVAYF 224
>gi|297264633|ref|XP_002799063.1| PREDICTED: protein boule-like isoform 2 [Macaca mulatta]
Length = 289
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 83
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 84 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 137
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 138 TSTGYPYTYHNGVAYF 153
>gi|113927267|emb|CAL25726.1| boll protein [Homo sapiens]
Length = 289
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 83
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 84 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 137
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 138 TSTGYPYTYHNGVAYF 153
>gi|426338152|ref|XP_004033053.1| PREDICTED: protein boule-like isoform 3 [Gorilla gorilla gorilla]
Length = 289
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 83
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 84 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 137
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 138 TSTGYPYTYHNGVAYF 153
>gi|44887721|sp|Q924M5.2|BOLL_MOUSE RecName: Full=Protein boule-like
Length = 281
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN + P+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ SL +P T +
Sbjct: 78 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSL------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|17026050|dbj|BAB72085.1| hypothetical protein [Macaca fascicularis]
Length = 218
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 105/150 (70%), Gaps = 8/150 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVPTSPPT 178
G PYTYHNG+A+F + + VP P+
Sbjct: 132 TSTGYPYTYHNGVAYFHTPEVTSVPPPWPS 161
>gi|37574731|ref|NP_932074.1| protein boule-like isoform 1 [Homo sapiens]
gi|119590579|gb|EAW70173.1| bol, boule-like (Drosophila), isoform CRA_c [Homo sapiens]
Length = 295
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|332209692|ref|XP_003253947.1| PREDICTED: protein boule-like isoform 3 [Nomascus leucogenys]
Length = 289
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 24 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 83
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 84 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 137
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 138 TSTGYPYTYHNGVAYF 153
>gi|426338150|ref|XP_004033052.1| PREDICTED: protein boule-like isoform 2 [Gorilla gorilla gorilla]
Length = 295
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|332209690|ref|XP_003253946.1| PREDICTED: protein boule-like isoform 2 [Nomascus leucogenys]
Length = 295
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|297669116|ref|XP_002812751.1| PREDICTED: protein boule-like isoform 1 [Pongo abelii]
Length = 295
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|164565432|ref|NP_001106841.1| protein boule-like [Rattus norvegicus]
gi|392350757|ref|XP_003750748.1| PREDICTED: protein boule-like [Rattus norvegicus]
gi|149046147|gb|EDL99040.1| similar to boule (predicted), isoform CRA_a [Rattus norvegicus]
Length = 293
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 96/131 (73%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+ P+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGFITF++
Sbjct: 35 SGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
+E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T + G
Sbjct: 95 QEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 149 PYTYHNGVAYF 159
>gi|332815073|ref|XP_001169371.2| PREDICTED: protein boule-like isoform 1 [Pan troglodytes]
gi|397509935|ref|XP_003825366.1| PREDICTED: protein boule-like isoform 2 [Pan paniscus]
Length = 295
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|297264635|ref|XP_002799064.1| PREDICTED: protein boule-like isoform 3 [Macaca mulatta]
gi|44887720|sp|Q8WP23.2|BOLL_MACFA RecName: Full=Protein boule-like
Length = 283
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|126326779|ref|XP_001379398.1| PREDICTED: protein boule-like [Monodelphis domestica]
Length = 334
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 106/150 (70%), Gaps = 8/150 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP++GTV+P R+FVGGI T E++L + F+QYG VK+VKIV DRAG+SKGYGF
Sbjct: 55 LNNPTSAPRFGTVIPNRIFVGGIDFKTNENDLRKFFAQYGSVKEVKIVNDRAGVSKGYGF 114
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T +
Sbjct: 115 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLT 168
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVPTSPPT 178
G PYTYHNG+A+F + + VP P+
Sbjct: 169 TSTGYPYTYHNGVAYFHTPEVASVPPPWPS 198
>gi|14719414|ref|NP_149019.1| protein boule-like isoform 2 [Homo sapiens]
gi|44887719|sp|Q8N9W6.2|BOLL_HUMAN RecName: Full=Protein boule-like
gi|14279684|gb|AAK58689.1| BOULE [Homo sapiens]
gi|16554131|dbj|BAB71664.1| unnamed protein product [Homo sapiens]
gi|21707064|gb|AAH33674.1| Bol, boule-like (Drosophila) [Homo sapiens]
gi|62702117|gb|AAX93045.1| unknown [Homo sapiens]
gi|119590578|gb|EAW70172.1| bol, boule-like (Drosophila), isoform CRA_b [Homo sapiens]
gi|312152350|gb|ADQ32687.1| bol, boule-like (Drosophila) [synthetic construct]
Length = 283
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 101/145 (69%), Gaps = 8/145 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVP 173
G PYTYHNG+A+F + + VP
Sbjct: 132 TSTGYPYTYHNGVAYFHTPEVTSVP 156
>gi|114582407|ref|XP_001169413.1| PREDICTED: protein boule-like isoform 2 [Pan troglodytes]
gi|114582411|ref|XP_001169481.1| PREDICTED: protein boule-like isoform 5 [Pan troglodytes]
gi|397509933|ref|XP_003825365.1| PREDICTED: protein boule-like isoform 1 [Pan paniscus]
gi|49609405|emb|CAG30556.1| BOULE protein [Pan paniscus]
Length = 283
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 101/145 (69%), Gaps = 8/145 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVP 173
G PYTYHNG+A+F + + VP
Sbjct: 132 TSTGYPYTYHNGVAYFHTPEVTSVP 156
>gi|332209688|ref|XP_003253945.1| PREDICTED: protein boule-like isoform 1 [Nomascus leucogenys]
Length = 283
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|297669118|ref|XP_002812752.1| PREDICTED: protein boule-like isoform 2 [Pongo abelii]
Length = 283
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|343958814|dbj|BAK63262.1| protein boule-like [Pan troglodytes]
Length = 167
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 99/139 (71%), Gaps = 6/139 (4%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF+TF+++
Sbjct: 24 APRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQ 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
E+A+++ ++++ + +K+K+LNI PAI+KQ +P +S +P T + G P
Sbjct: 84 EDAQKILQEAEKLNYKDKKLNIGPAIRKQQV-----GIPR-SSIMPAAGTMYLTTSTGYP 137
Query: 155 YTYHNGMAFFPSNGQSMVP 173
YTYHNG+A+F + + VP
Sbjct: 138 YTYHNGVAYFHTPEVTSVP 156
>gi|395520005|ref|XP_003764129.1| PREDICTED: protein boule-like [Sarcophilus harrisii]
Length = 351
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 102/145 (70%), Gaps = 8/145 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP++GTV+P R+FVGGI T E++L + F+QYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRFGTVIPNRIFVGGIDFKTNENDLRKFFAQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
ITF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 90 ITFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFFPSNGQSMVP 173
G PYTYHNG+A+F + + VP
Sbjct: 144 TSTGYPYTYHNGVAYFHTPEVASVP 168
>gi|390352375|ref|XP_003727886.1| PREDICTED: uncharacterized protein LOC100892519 [Strongylocentrotus
purpuratus]
Length = 440
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 13/143 (9%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTED-ELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
NAP+YGT++P R+FVGGI T D EL FS +G VK+ KI+ DRAG+SKGYGFITF+
Sbjct: 29 NAPRYGTIIPNRIFVGGIAFNQTSDAELRNFFSAFGHVKEAKIIADRAGVSKGYGFITFE 88
Query: 93 SEEEAKRLQKDSDN-IMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
+ EEA R+ KD N ++FKEK+LNI AI+KQ D P + +P S M +H+
Sbjct: 89 TPEEAHRILKDQANCLVFKEKKLNIGQAIRKQPLKYPKDVDPAL------IP-SGMVFHS 141
Query: 152 ---GLPYTYHNGMAFF-PSNGQS 170
G YTYHNG+A+F PS+ Q+
Sbjct: 142 PSGGYSYTYHNGVAYFNPSDAQA 164
>gi|149496208|ref|XP_001512796.1| PREDICTED: protein boule-like, partial [Ornithorhynchus anatinus]
Length = 165
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 96/136 (70%), Gaps = 8/136 (5%)
Query: 31 VNNNA--PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN A P++GTV+P R+FVGGI T E +L + F+QYG VK+VKIV DRAG+SKGYGF
Sbjct: 23 LNNPASGPRFGTVIPNRIFVGGIDFKTNESDLRKFFAQYGAVKEVKIVNDRAGVSKGYGF 82
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ SL +P T +
Sbjct: 83 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSL------MPAAGTMYLR 136
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 137 TSTGYPYTYHNGVAYF 152
>gi|156120877|ref|NP_001095585.1| protein boule-like isoform 1 [Bos taurus]
gi|151555791|gb|AAI49293.1| BOLL protein [Bos taurus]
Length = 295
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 93/131 (70%), Gaps = 6/131 (4%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYG +TF++
Sbjct: 35 SAPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGIVTFET 94
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGL 153
E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T + G
Sbjct: 95 LEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLTTSTGY 148
Query: 154 PYTYHNGMAFF 164
PYTYHNG+A+F
Sbjct: 149 PYTYHNGVAYF 159
>gi|449507397|ref|XP_004175354.1| PREDICTED: LOW QUALITY PROTEIN: protein boule-like [Taeniopygia
guttata]
Length = 276
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 90/133 (67%), Gaps = 7/133 (5%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
++P+ G V+P RVFVGGI E +L F+QYG V +VKI+ DRAG+SKGYGF+TF++
Sbjct: 23 SSPRSGAVIPNRVFVGGIDFKANEKDLKNFFAQYGSVTEVKIINDRAGVSKGYGFVTFET 82
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYY--HN 151
+EEA+++ +D+ N+ +K K+LNIAPA++KQ F + S V P MY +
Sbjct: 83 QEEAQKILQDAKNLNYKNKKLNIAPAVRKQAFX-----IFIPGSSVAPQAAGTMYLTTSS 137
Query: 152 GLPYTYHNGMAFF 164
G PY YHNG+A+F
Sbjct: 138 GYPYVYHNGVAYF 150
>gi|195326221|ref|XP_002029828.1| GM24891 [Drosophila sechellia]
gi|194118771|gb|EDW40814.1| GM24891 [Drosophila sechellia]
Length = 228
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 75/89 (84%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
+EA+RLQ D + ++ ++++LNIAPAIKKQ
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQ 112
>gi|195490954|ref|XP_002093358.1| GE21261 [Drosophila yakuba]
gi|194179459|gb|EDW93070.1| GE21261 [Drosophila yakuba]
Length = 228
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 86/118 (72%), Gaps = 7/118 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
+EA+RLQ D + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPISNI 139
>gi|17647207|ref|NP_523989.1| boule, isoform B [Drosophila melanogaster]
gi|24661386|ref|NP_729456.1| boule, isoform D [Drosophila melanogaster]
gi|44887716|sp|Q24207.1|BOULE_DROME RecName: Full=Protein boule
gi|1395211|gb|AAC47133.1| boule protein [Drosophila melanogaster]
gi|23093860|gb|AAF50317.3| boule, isoform B [Drosophila melanogaster]
gi|23093861|gb|AAN11986.1| boule, isoform D [Drosophila melanogaster]
Length = 228
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 86/118 (72%), Gaps = 7/118 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
+EA+RLQ D + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPISNI 139
>gi|194865700|ref|XP_001971560.1| GG15038 [Drosophila erecta]
gi|190653343|gb|EDV50586.1| GG15038 [Drosophila erecta]
Length = 233
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 75/89 (84%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
+EA+RLQ D + ++ ++++LNIAPAIKKQ
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQ 112
>gi|442631220|ref|NP_001261614.1| boule, isoform F [Drosophila melanogaster]
gi|440215525|gb|AGB94309.1| boule, isoform F [Drosophila melanogaster]
Length = 233
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 75/89 (84%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
+EA+RLQ D + ++ ++++LNIAPAIKKQ
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQ 112
>gi|195135603|ref|XP_002012222.1| GI16553 [Drosophila mojavensis]
gi|193918486|gb|EDW17353.1| GI16553 [Drosophila mojavensis]
Length = 231
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 86/118 (72%), Gaps = 7/118 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
+EA+RLQ D + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPISNI 139
>gi|326922525|ref|XP_003207499.1| PREDICTED: protein boule-like, partial [Meleagris gallopavo]
Length = 288
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 94/130 (72%), Gaps = 6/130 (4%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP++GTV P R+FVGGI T E++L + F+QYG V++VKIV DRAGISKGYGFITF+++
Sbjct: 29 APRFGTVTPNRIFVGGIDFKTNENDLRKFFAQYGCVREVKIVNDRAGISKGYGFITFETQ 88
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
E+A+++ +++ + +K+K+LNI PAI+KQ +P ++ +P T + +G P
Sbjct: 89 EDAQKILQEAKKLNYKDKKLNIGPAIRKQQ-----TRIPR-SNVIPEGGTMYLTTSSGYP 142
Query: 155 YTYHNGMAFF 164
Y YHNG+A+F
Sbjct: 143 YIYHNGVAYF 152
>gi|195374948|ref|XP_002046265.1| GJ12804 [Drosophila virilis]
gi|194153423|gb|EDW68607.1| GJ12804 [Drosophila virilis]
Length = 231
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 86/118 (72%), Gaps = 7/118 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
+EA+RLQ D + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPISNI 139
>gi|24661390|ref|NP_729457.1| boule, isoform A [Drosophila melanogaster]
gi|24661394|ref|NP_729458.1| boule, isoform C [Drosophila melanogaster]
gi|23093862|gb|AAF50316.3| boule, isoform A [Drosophila melanogaster]
gi|23093863|gb|AAN11987.1| boule, isoform C [Drosophila melanogaster]
Length = 189
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 86/118 (72%), Gaps = 7/118 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
+EA+RLQ D + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPISNI 139
>gi|194751999|ref|XP_001958310.1| GF23585 [Drosophila ananassae]
gi|190625592|gb|EDV41116.1| GF23585 [Drosophila ananassae]
Length = 235
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 85/118 (72%), Gaps = 7/118 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
PKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 GPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
+EA+RLQ D + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 84 QEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPISNI 139
>gi|195012041|ref|XP_001983445.1| GH15900 [Drosophila grimshawi]
gi|193896927|gb|EDV95793.1| GH15900 [Drosophila grimshawi]
Length = 233
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 86/118 (72%), Gaps = 7/118 (5%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
+EA+RLQ + + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 84 QEAQRLQAEGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPMSNI 139
>gi|195442838|ref|XP_002069153.1| GK24376 [Drosophila willistoni]
gi|194165238|gb|EDW80139.1| GK24376 [Drosophila willistoni]
Length = 277
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 85/117 (72%), Gaps = 7/117 (5%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
PKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E+
Sbjct: 25 PKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETEQ 84
Query: 96 EAKRLQKDSDNIMFKEKRLNIAPAIKK-----QGFTGTYDSLPTVTSPVPPVPTSNM 147
EA+RLQ D + ++ ++++LNIAPAIKK Q T ++ T+ PP P SN+
Sbjct: 85 EAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTT--PPAPISNI 139
>gi|363735874|ref|XP_421917.3| PREDICTED: protein boule-like [Gallus gallus]
Length = 312
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 24/139 (17%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP++GTV P R+FVGGI T E++L + F+QYG V++VKIV DRAGISKGYGFITF+++
Sbjct: 61 APRFGTVTPNRIFVGGIDFKTNENDLRKFFAQYGCVREVKIVNDRAGISKGYGFITFETQ 120
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN-------M 147
E+A+++ +++ + +K+K+LNI PAI+KQ +P SN M
Sbjct: 121 EDAQKILQEAKKLNYKDKKLNIGPAIRKQQTR---------------MPRSNVIQEGGTM 165
Query: 148 YY--HNGLPYTYHNGMAFF 164
Y +G PY YHNG+A+F
Sbjct: 166 YLTTSSGYPYIYHNGVAYF 184
>gi|320542663|gb|ADW41783.1| Boule, partial [Oncorhynchus mykiss]
Length = 194
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 87/120 (72%), Gaps = 4/120 (3%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF 91
+++A ++GTV+P R+FVGGI T E +L FSQ+G VK+VKIV+DRAG+SKGYGF+TF
Sbjct: 35 SHHALRFGTVIPNRIFVGGIDFKTNESDLRRFFSQHGAVKEVKIVIDRAGVSKGYGFVTF 94
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVP---PVPTSNMY 148
+++E+ +R+ D+D + F++KRLNI A++KQ G +S +V+S P P P NMY
Sbjct: 95 ETQEDTERILHDADRLCFRDKRLNIGQAVRKQQVGGHQNSF-SVSSHTPAMIPTPCGNMY 153
>gi|256078471|ref|XP_002575519.1| boule-related [Schistosoma mansoni]
gi|353233685|emb|CCD81039.1| boule-related [Schistosoma mansoni]
Length = 509
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 96/155 (61%), Gaps = 12/155 (7%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
PK+GT++P R+FVGGI S T E EL FS +G VK VKI+ DR G SKGYGF+TF+S+E
Sbjct: 36 PKFGTLIPNRIFVGGIPSNTNEQELKSFFSSFGHVKDVKIINDRLGASKGYGFVTFESQE 95
Query: 96 EAKRLQK-DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
A+++ K +S+ ++FK+++LNI AI+KQ P P + T+ ++ + +P
Sbjct: 96 MAEKIIKNESETLIFKDRKLNIGHAIRKQQIF-----------PRPELTTTLLFTGSAIP 144
Query: 155 YTYHNGMAFFPSNGQSMVPTSPPTVPTQVKILLPP 189
Y++ NGMA FP GQ + T P IL P
Sbjct: 145 YSFQNGMAVFPLPGQEYPILTQTTAPYATMILPQP 179
>gi|449282207|gb|EMC89093.1| Protein boule-like protein, partial [Columba livia]
Length = 272
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 93/136 (68%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN + P G + P R+FVGGI T E +L + F+QYG VK+VKIV DRAG+SKGYGF
Sbjct: 23 LNNLISVPGVGRITPNRIFVGGIGFKTKESDLRKFFAQYGSVKEVKIVNDRAGVSKGYGF 82
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ +++ N+ +++K+L+I PAI+KQ + ++ VP T +
Sbjct: 83 VTFETQEDAQKILQEAKNLNYRDKKLDIGPAIRKQHIRSSGSAV------VPEAGTMYLT 136
Query: 149 YHNGLPYTYHNGMAFF 164
+G PY YHNG+A+F
Sbjct: 137 TSSGYPYIYHNGVAYF 152
>gi|355565070|gb|EHH21559.1| hypothetical protein EGK_04658 [Macaca mulatta]
Length = 295
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 8/136 (5%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI T E +L + FSQYG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGF 89
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+L I S+ +P T +
Sbjct: 90 VTFETQEDAQKILQEAEKLNYKDKKLKIGXXXXXXXXXXXXSSI------MPAAGTMYLT 143
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 144 TSTGYPYTYHNGVAYF 159
>gi|12854741|dbj|BAB30121.1| unnamed protein product [Mus musculus]
gi|157170036|gb|AAI52872.1| Bol, boule-like (Drosophila) [synthetic construct]
Length = 132
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 75/89 (84%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
P+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGFITF+++
Sbjct: 36 GPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQ 95
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
E+A+++ ++++ + +K+K+LNI PAI+KQ
Sbjct: 96 EDAQKILQEAEKLNYKDKKLNIGPAIRKQ 124
>gi|291233342|ref|XP_002736613.1| PREDICTED: dynein heavy chain at 36C-like [Saccoglossus kowalevskii]
Length = 5501
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 88/126 (69%), Gaps = 15/126 (11%)
Query: 4 AHPSEGSSNPS---SPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDEL 60
+H GS+ S S SST +N +AP++GT++ R+FVGGIT T + L
Sbjct: 5183 SHSQHGSTATSPVPSKSSTPDNP---------THAPRFGTLIANRIFVGGITYDTNDSAL 5233
Query: 61 CELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ---KDSDNIMFKEKRLNIA 117
E FS++G VK+ KI+ DRAG+SKGYGFITF+++EEA R+Q K+S+N++F++K+LNI
Sbjct: 5234 KEYFSKFGHVKEAKIICDRAGVSKGYGFITFETQEEATRIQDEYKNSNNLIFRDKKLNIG 5293
Query: 118 PAIKKQ 123
PA++KQ
Sbjct: 5294 PAVRKQ 5299
>gi|348536946|ref|XP_003455956.1| PREDICTED: protein boule-like [Oreochromis niloticus]
Length = 334
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 110/185 (59%), Gaps = 12/185 (6%)
Query: 8 EGSSNPSSPSSTQNNAFF--NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFS 65
E +S S SS+ ++ +Y ++ +++ +G V+P R+FVG + E +L +FS
Sbjct: 4 EAASQKSGGSSSPSDVLLPDDYADSLTDHSTTFGNVIPNRIFVGALDYRVNERDLRHIFS 63
Query: 66 QYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGF 125
Q+G VK+VKIV+D +G+S+GYGF+TF+++E+A ++ +++ + FK+K+L++ PA +K
Sbjct: 64 QHGTVKEVKIVLDHSGVSRGYGFVTFETQEDALKILNNTNGVTFKDKKLSVGPAFRKHQP 123
Query: 126 TGTYDSLPTVT-SPVPPVPTSNMYYH----NGLPYTYHNGMAFFP-----SNGQSMVPTS 175
+ S T + P P TS ++ G PYTYHNG+A+F S +P S
Sbjct: 124 SSQTKSTSTASFEPAMPQQTSYGTFYLTTATGSPYTYHNGVAYFHCSNMTSPSYQWLPPS 183
Query: 176 PPTVP 180
P VP
Sbjct: 184 SPMVP 188
>gi|426221300|ref|XP_004004848.1| PREDICTED: protein boule-like isoform 2 [Ovis aries]
Length = 283
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 20/136 (14%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI +YG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDF------------KYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|280967447|ref|NP_001162175.1| protein boule-like isoform 2 [Bos taurus]
gi|270271225|gb|ACZ67144.1| boule protein transcript variant 1 [Bos taurus]
Length = 283
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 20/136 (14%)
Query: 31 VNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
+NN +AP+YGTV+P R+FVGGI +YG VK+VKIV DRAG+SKGYGF
Sbjct: 30 LNNPTSAPRYGTVIPNRIFVGGIDF------------KYGSVKEVKIVNDRAGVSKGYGF 77
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+TF+++E+A+++ ++++ + +K+K+LNI PAI+KQ S+ +P T +
Sbjct: 78 VTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSI------MPAAGTMYLT 131
Query: 149 YHNGLPYTYHNGMAFF 164
G PYTYHNG+A+F
Sbjct: 132 TSTGYPYTYHNGVAYF 147
>gi|260827782|ref|XP_002608843.1| hypothetical protein BRAFLDRAFT_89712 [Branchiostoma floridae]
gi|229294196|gb|EEN64853.1| hypothetical protein BRAFLDRAFT_89712 [Branchiostoma floridae]
Length = 413
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 30/190 (15%)
Query: 24 FFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS 83
+++YQ + GT+ RVFV G +E EL + FSQ+G V+ KI+ DRAG+S
Sbjct: 91 WWHYQHV------QIGTLFRDRVFVRGFDPDCSEQELRDFFSQFGAVRDTKIIADRAGVS 144
Query: 84 KGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPV- 142
KGYGF+TFDS+E A + Q++ DN+MFK+KRLN+ PAI+KQ P++ SP P
Sbjct: 145 KGYGFVTFDSQEAADKAQQN-DNLMFKDKRLNVGPAIRKQS--------PSLPSPFRPES 195
Query: 143 ----------PTSNMYYHNGLPYTYHNGMAFFPSNGQSMV-PTSPPTVPTQVKILLPPGV 191
P+++ + LPY Y ++ P Q++V P+ PP++ + I+LP G
Sbjct: 196 SCSPYLADIGPSTSFVNNWSLPYGYMCPDSYLPQ--QTIVGPSVPPSL-SPAPIMLPAGP 252
Query: 192 LLCGICLIFL 201
C +++
Sbjct: 253 PTHQPCNMYM 262
>gi|195400723|ref|XP_002058965.1| GJ15254 [Drosophila virilis]
gi|194141617|gb|EDW58034.1| GJ15254 [Drosophila virilis]
Length = 341
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
P YGTV+P RVFVGGI+ TTE +L FS YG V+ KI+VD+ G +KGYGF+TF++EE
Sbjct: 131 PIYGTVIPNRVFVGGISRDTTESDLMIAFSAYGTVRSTKIIVDQDGFNKGYGFVTFETEE 190
Query: 96 EAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
EA+RLQ ++ + +RLNIAPA KKQ
Sbjct: 191 EAQRLQSVGKCVILRNRRLNIAPAFKKQ 218
>gi|195131285|ref|XP_002010081.1| GI15726 [Drosophila mojavensis]
gi|193908531|gb|EDW07398.1| GI15726 [Drosophila mojavensis]
Length = 265
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 66/88 (75%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
P YGT++P RVFVGGI+ TTE +L FS YG V+ KI+VD+ G +KGYGF+TF++EE
Sbjct: 42 PIYGTMIPNRVFVGGISRDTTESDLMIAFSAYGSVRSTKIIVDQDGFNKGYGFVTFETEE 101
Query: 96 EAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
EA+RLQ ++ + +RLNIAPA KKQ
Sbjct: 102 EAQRLQSVGKCVILRNRRLNIAPAFKKQ 129
>gi|260827780|ref|XP_002608842.1| hypothetical protein BRAFLDRAFT_89711 [Branchiostoma floridae]
gi|229294195|gb|EEN64852.1| hypothetical protein BRAFLDRAFT_89711 [Branchiostoma floridae]
Length = 447
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 90/154 (58%), Gaps = 21/154 (13%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
GT + R+FVGG+T+ T+E EL F YG VK VKI+ D+ G++KGY F+TF S EEA
Sbjct: 152 GTKIDGRIFVGGVTAGTSEQELKGYFGAYGTVKDVKIIFDKQGLTKGYAFVTFTSNEEAT 211
Query: 99 RLQKDSDN---IMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLP- 154
+L K +D +FKEK+LNI PAIKK+ VT V VP + +N P
Sbjct: 212 KLIKQADAGQLFLFKEKKLNIGPAIKKR-----------VTDFV--VPGAGGMVYNPYPG 258
Query: 155 YTYHNGMAFFPSNGQSMVPTSPPTVPTQVKILLP 188
Y Y NG+A+F G VP +PP P Q + +P
Sbjct: 259 YAYQNGVAYFTPEG---VPQAPP-FPHQALLAMP 288
>gi|345483851|ref|XP_003424897.1| PREDICTED: protein boule, partial [Nasonia vitripennis]
Length = 79
Score = 110 bits (276), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 66/77 (85%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APK+GT+VP R+FVGGI+++T+E EL +LFS YG VK KI+ DR G+SKGYGF+TF++E
Sbjct: 3 APKFGTLVPNRIFVGGISASTSEAELAQLFSAYGNVKATKIIADRGGVSKGYGFVTFETE 62
Query: 95 EEAKRLQKDSDNIMFKE 111
EEAKRLQ++S+ I+ +E
Sbjct: 63 EEAKRLQQESECIVLRE 79
>gi|198423973|ref|XP_002124618.1| PREDICTED: similar to bol, boule-like (Drosophila) [Ciona
intestinalis]
Length = 387
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 65/92 (70%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF 91
N N P++GTV+P R+FVGGI T E++L + F YG+VK KI+ DRA +SKGYGF+TF
Sbjct: 48 NGNVPRFGTVIPNRIFVGGIDFKTKEEDLQKFFCNYGMVKDTKIIRDRADVSKGYGFVTF 107
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ EEA R++ D + K+LNI AI+KQ
Sbjct: 108 ETSEEADRVRDQEDCLYLNGKKLNIGQAIRKQ 139
>gi|91179154|gb|ABE27761.1| boule, partial [Azumapecten farreri]
Length = 225
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 72/99 (72%), Gaps = 10/99 (10%)
Query: 67 YGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR-LQKDSDNIMFKEKRLNIAPAIKKQGF 125
YG VK KI+ DRAG+SKGYGFITF+++E+A+R ++K++DN++FK+++LNI PAI+KQ
Sbjct: 3 YGAVKDSKIIADRAGVSKGYGFITFENQEDAERIIKKEADNLVFKDRKLNIGPAIRKQVL 62
Query: 126 TGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFF 164
++D +PT + + NG+PYTY NGMA F
Sbjct: 63 QRSFDQS---------IPTGTVMFSNGVPYTYQNGMAIF 92
>gi|198466884|ref|XP_001354168.2| GA18412 [Drosophila pseudoobscura pseudoobscura]
gi|198149598|gb|EAL31220.2| GA18412 [Drosophila pseudoobscura pseudoobscura]
Length = 190
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 58/69 (84%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 23 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 82
Query: 95 EEAKRLQKD 103
+EA+RLQ D
Sbjct: 83 QEAQRLQSD 91
>gi|281365909|ref|NP_001163394.1| boule, isoform E [Drosophila melanogaster]
gi|41058247|gb|AAR99153.1| GH12029p [Drosophila melanogaster]
gi|272455116|gb|ACZ94665.1| boule, isoform E [Drosophila melanogaster]
Length = 95
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 58/70 (82%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG+SKGYGF+TF++E
Sbjct: 24 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETE 83
Query: 95 EEAKRLQKDS 104
+EA+RLQ D
Sbjct: 84 QEAQRLQADG 93
>gi|340763933|gb|AEK69207.1| boule-like protein 3 [Macrostomum lignano]
Length = 162
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEA- 97
GT++P RVFVGGI S+ TE EL E FS G V+ VKI+ D++G SKGYGF+TF+S E A
Sbjct: 60 GTLIPNRVFVGGIPSSATEAELMEFFSALGEVRDVKIIADKSGTSKGYGFVTFESAELAD 119
Query: 98 ---KRLQKDSDNIMFKEKRLNIAPAIKK 122
+R ++ D ++F+ +RLNI PAIKK
Sbjct: 120 SIIRRDRESRDGLVFRSRRLNIGPAIKK 147
>gi|256985142|ref|NP_001157989.1| boule [Oryzias latipes]
gi|255733138|gb|ACU31026.1| boule [Oryzias latipes]
Length = 295
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 13/152 (8%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG--ISKGYGFITF 91
+AP+ T++P R+FVGG+ TE+ L +FS YG V +VKIV +R+G +SKGYGF+TF
Sbjct: 32 HAPR--TIIPNRIFVGGVDCKVTENHLHHIFSHYGTVTEVKIVTNRSGMSMSKGYGFVTF 89
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSP-VPPVPTSNMYYH 150
++ E+ + ++ I F++K+ +I+ AI+K G V P + PT + Y
Sbjct: 90 EAPEDVVNILSKANRICFRDKKFSISQAIQKSQAPGPGS---IVHKPFIHHDPTCDTVYL 146
Query: 151 N---GLPYTYHNGMAFF--PSNGQSMVPTSPP 177
G PYT+HNG+A+F P+ Q+ SPP
Sbjct: 147 TTPAGFPYTFHNGVAYFNCPAMNQAARQWSPP 178
>gi|193704805|ref|XP_001949429.1| PREDICTED: hypothetical protein LOC100161424 isoform 1
[Acyrthosiphon pisum]
Length = 636
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 91/154 (59%), Gaps = 17/154 (11%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
T+VP R+FVGG+ + T+E EL FS YG VK VKIV D+AG KG+GFITF SEEE K+
Sbjct: 47 TMVPNRIFVGGLANGTSEQELRNFFSIYGEVKVVKIVKDKAGSLKGFGFITFGSEEEVKK 106
Query: 100 LQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS---------LPTVTS-----PVPPVPTS 145
+ +MFK+KR+NIAPA +K YDS L + +S VPP+PT
Sbjct: 107 IIDAGPVLMFKDKRINIAPAYEKD-IKSNYDSNSPPQQQSHLMSYSSQVQQYSVPPLPTP 165
Query: 146 NMYYHNGLPYTYHNGMAFF--PSNGQSMVPTSPP 177
+ YTY NGMAFF P NG + V PP
Sbjct: 166 AQPMLAPVMYTYQNGMAFFNMPINGNTAVTPQPP 199
>gi|313221340|emb|CBY32095.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 64/89 (71%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI T+E++L + FS++G V+ +I+ DRA +SKGYGF+T+D+
Sbjct: 28 APKYGTMIPSRIFVGGIDFKTSEEDLRDYFSKFGSVRDARIIRDRAEVSKGYGFVTYDNA 87
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
++SDN+ K+LNI A++KQ
Sbjct: 88 NAVNNALEESDNLNLHGKKLNIGRAVRKQ 116
>gi|313235358|emb|CBY19703.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 64/89 (71%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI T+E++L + FS++G V+ +I+ DRA +SKGYGF+T+D+
Sbjct: 28 APKYGTMIPSRIFVGGIDFKTSEEDLRDYFSKFGSVRDARIIRDRAEVSKGYGFVTYDNA 87
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
++SDN+ K+LNI A++KQ
Sbjct: 88 NAVNNALEESDNLNLHGKKLNIGRAVRKQ 116
>gi|328720949|ref|XP_003247169.1| PREDICTED: hypothetical protein LOC100161424 isoform 2
[Acyrthosiphon pisum]
Length = 589
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 90/153 (58%), Gaps = 17/153 (11%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRL 100
+VP R+FVGG+ + T+E EL FS YG VK VKIV D+AG KG+GFITF SEEE K++
Sbjct: 1 MVPNRIFVGGLANGTSEQELRNFFSIYGEVKVVKIVKDKAGSLKGFGFITFGSEEEVKKI 60
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS---------LPTVTS-----PVPPVPTSN 146
+MFK+KR+NIAPA +K YDS L + +S VPP+PT
Sbjct: 61 IDAGPVLMFKDKRINIAPAYEKD-IKSNYDSNSPPQQQSHLMSYSSQVQQYSVPPLPTPA 119
Query: 147 MYYHNGLPYTYHNGMAFF--PSNGQSMVPTSPP 177
+ YTY NGMAFF P NG + V PP
Sbjct: 120 QPMLAPVMYTYQNGMAFFNMPINGNTAVTPQPP 152
>gi|443687391|gb|ELT90389.1| hypothetical protein CAPTEDRAFT_30326, partial [Capitella teleta]
Length = 82
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 57/68 (83%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
+APKYGT++P R+FVGGI+ TE EL + F+Q+G VK KI++DRAG+SKGYGF+TF+
Sbjct: 15 QSAPKYGTLIPNRIFVGGISGNATEAELKQFFTQFGAVKDAKIIMDRAGVSKGYGFVTFE 74
Query: 93 SEEEAKRL 100
S+EEA+++
Sbjct: 75 SQEEAEKI 82
>gi|256593457|gb|ACV03664.1| Boule isoform b [Rhinolophus ferrumequinum]
Length = 95
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 59/69 (85%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP+YGTV+P R+FVGGI T E++L + FSQYG VK+VKIV DRAG+SKGYGF+TF+++
Sbjct: 24 APRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQ 83
Query: 95 EEAKRLQKD 103
E+A+++ ++
Sbjct: 84 EDAQKILQE 92
>gi|410905891|ref|XP_003966425.1| PREDICTED: uncharacterized protein LOC101069052 [Takifugu rubripes]
Length = 461
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 61/83 (73%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRL 100
V+P R+FVGG ST + +L E+FSQ+G VK VKIV R+GIS GYGF+TF+ +E+ +++
Sbjct: 39 VIPNRIFVGGFGSTVKDSDLREVFSQHGTVKNVKIVTGRSGISMGYGFVTFEHQEDVQKI 98
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQ 123
+D D+I FK+K+L + A +K
Sbjct: 99 LQDGDDISFKDKKLTVGQAFRKH 121
>gi|324517320|gb|ADY46784.1| DAZ protein 1, partial [Ascaris suum]
Length = 412
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRL 100
++P RVFVGG + T+E EL LF ++G V++ K++ G SKGYGFITFDSEEEAK +
Sbjct: 45 LIPHRVFVGGFPAATSESELRTLFEKFGHVREAKVIRSGEGASKGYGFITFDSEEEAKLV 104
Query: 101 QK--DSDNIMFKEKRLNIAPAIKK 122
+ + + + F+ +RLN+ PA+++
Sbjct: 105 MEKAEREKLEFRGRRLNLGPAVRR 128
>gi|324507041|gb|ADY42994.1| DAZ protein 1 [Ascaris suum]
Length = 422
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRL 100
++P RVFVGG + T+E EL LF ++G V++ K++ G SKGYGFITFDSEEEAK +
Sbjct: 45 LIPHRVFVGGFPAATSESELRTLFEKFGHVREAKVIRSGEGASKGYGFITFDSEEEAKLV 104
Query: 101 QK--DSDNIMFKEKRLNIAPAIKK 122
+ + + + F+ +RLN+ PA+++
Sbjct: 105 MEKAEREKLEFRGRRLNLGPAVRR 128
>gi|164448656|ref|NP_001106740.1| boule protein [Bombyx mori]
gi|95103132|gb|ABF51507.1| BOULE protein [Bombyx mori]
Length = 198
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
+APK+GTV+ R+FVGG + TTT+++L + FS + V +++ DRAG+SK YGF+TF
Sbjct: 54 TDAPKFGTVIHNRIFVGGFSLTTTDEDLWKFFSTFATVTAARVIYDRAGVSKCYGFVTFA 113
Query: 93 SEEEAKRLQKDSDNIMFKE-KRLNIAPAIKKQ 123
S AK + K S +MF RL +A A++KQ
Sbjct: 114 SPRVAKLIVKQSGGVMFSPLGRLRVAQAVRKQ 145
>gi|387915972|gb|AFK11595.1| DAZ-like protein [Callorhinchus milii]
Length = 258
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P +FVGGI +EDE+ F++YG VKQVKI+ D G+S+GYGF++F ++ + +
Sbjct: 39 GRIMPNTIFVGGIDFEMSEDEMRGFFARYGAVKQVKIISDGGGVSRGYGFVSFHNDVDIQ 98
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
++ +S I FK K+L I PAI+KQ + + +P+ PTS MY
Sbjct: 99 KIISES-QINFKGKKLKIGPAIRKQQDSYPIQLVQARPAPLIASPTSCMY 147
>gi|403265519|ref|XP_003924979.1| PREDICTED: deleted in azoospermia-like [Saimiri boliviensis
boliviensis]
gi|49613971|emb|CAG30562.2| DAZL protein [Saimiri sciureus]
Length = 296
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 86/149 (57%), Gaps = 7/149 (4%)
Query: 1 MSGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDEL 60
MS A+P +S S ++TQ+++ Q V P+ G ++P VFVGGI E E+
Sbjct: 1 MSAANPETPNSTISREANTQSSSTATSQGYV---LPE-GKIMPNTVFVGGIDVRMDETEI 56
Query: 61 CELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAI 120
F++YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I F K+L + PAI
Sbjct: 57 RSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQ--INFHGKKLKLGPAI 114
Query: 121 KKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
+KQ F + P V + PP N++
Sbjct: 115 RKQNFCAYHVQPRPLVFNQPPPPQFQNVW 143
>gi|44889061|sp|Q20870.3|DAZ1_CAEEL RecName: Full=DAZ protein 1
gi|6635139|dbj|BAA88577.1| DAZ-1 [Caenorhabditis elegans]
Length = 499
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP ++P R+FVGG ++TTE EL E F ++ VK VK+V G SKGYGFITF++E
Sbjct: 58 APPTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETE 117
Query: 95 EEAKRLQK-DSDNIMFKEKRLNIAPAIKK 122
++A+ ++K + F+ ++LN+ PAI+K
Sbjct: 118 DQAEEIRKLTPKQLEFRSRKLNLGPAIRK 146
>gi|71990726|ref|NP_495036.3| Protein DAZ-1 [Caenorhabditis elegans]
gi|351061195|emb|CCD68962.1| Protein DAZ-1 [Caenorhabditis elegans]
Length = 498
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP ++P R+FVGG ++TTE EL E F ++ VK VK+V G SKGYGFITF++E
Sbjct: 57 APPTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETE 116
Query: 95 EEAKRLQK-DSDNIMFKEKRLNIAPAIKK 122
++A+ ++K + F+ ++LN+ PAI+K
Sbjct: 117 DQAEEIRKLTPKQLEFRSRKLNLGPAIRK 145
>gi|227463277|gb|ACP40088.1| deleted in azoospermia-like protein [Bos grunniens]
Length = 295
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 6/125 (4%)
Query: 1 MSGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDEL 60
MS A+P +S S +STQ ++ Q V P+ G ++P VFVGGI E E+
Sbjct: 1 MSAANPETPNSTISREASTQXSSATTXQGYV---LPE-GKIMPNTVFVGGIDVRMDETEI 56
Query: 61 CELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAI 120
F++YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + N F K+L + PAI
Sbjct: 57 RSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVESQIN--FHGKKLKLGPAI 114
Query: 121 KKQGF 125
+KQ
Sbjct: 115 RKQNL 119
>gi|51555850|dbj|BAD38676.1| DAZ-like protein [Cynops pyrrhogaster]
Length = 302
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G V+P VFVGGI E E+ + F+++G VK+VKI+ DR G+SKGYGF++F + + +
Sbjct: 35 GKVMPNTVFVGGIDIRMDEIEIRDFFARFGAVKEVKIITDRTGVSKGYGFVSFHDDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTY 157
++ DS I F K+L + PAI+KQ Y P PP P + + N TY
Sbjct: 95 KI-VDS-QINFHGKKLKLGPAIRKQQNLCAYHVQPRPMVLNPPAPQFHSMWSNQNAETY 151
>gi|91064846|dbj|BAE93143.1| Cr-DAZ-1 [Caenorhabditis remanei]
Length = 452
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP ++P R+FVGG TTE +L E F ++ VK VK+V G+SKGYGFITF++E
Sbjct: 56 APPTYELIPNRIFVGGFPVNTTESDLREHFEKFFPVKDVKMVKSLDGVSKGYGFITFETE 115
Query: 95 EEAKRL-QKDSDNIMFKEKRLNIAPAIKK 122
++A+ + Q + + F+ ++LN+ PAI+K
Sbjct: 116 DQAEEIRQLNPKQLEFRSRKLNLGPAIRK 144
>gi|175377798|gb|ACB72414.1| DAZ-like protein beta, partial [Xenopus (Silurana) epitropicalis]
Length = 250
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P VFVGGI T E E+ LF +YG VK VKI+ DR G+SKGYGF+ F E + +++
Sbjct: 1 MPNSVFVGGIDITMDEIEIINLFEKYGKVKDVKIITDRTGVSKGYGFVCFYDEVDMQKIV 60
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSP 138
K N FK K+L + PAI+K TY + P V SP
Sbjct: 61 KSQIN--FKGKKLKLGPAIRKMQRICTYVQTSPVVISP 96
>gi|302202628|gb|ADL09421.1| boule-like protein [Macrostomum lignano]
Length = 417
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
Query: 40 TVVPKRVFVGGITSTTTEDE----LCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
TV+ R+F+GGI E+E L F ++ ++K VKI+ DR G SKGYGFITFDS++
Sbjct: 16 TVIENRIFIGGIPPHADENEFRNFLTSTFDKF-MIKDVKIIFDRTGASKGYGFITFDSKD 74
Query: 96 EAKRL--QKDSDNIMFKEKRLNIAPAIKKQGF 125
A+++ ++ +N+M+K+++LNI+ A+KK F
Sbjct: 75 VAQKILNSQEYENLMYKDRKLNISKAVKKNTF 106
>gi|7504410|pir||T30110 hypothetical protein F56D1.5 - Caenorhabditis elegans
Length = 870
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP ++P R+FVGG ++TTE EL E F ++ VK VK+V G SKGYGFITF++E
Sbjct: 429 APPTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETE 488
Query: 95 EEAKRLQKDS-DNIMFKEKRLNIAPAIKK 122
++A+ ++K + + F+ ++LN+ PAI+K
Sbjct: 489 DQAEEIRKLTPKQLEFRSRKLNLGPAIRK 517
>gi|49609415|emb|CAG30561.1| DAZL protein [Saguinus oedipus]
Length = 296
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 6/129 (4%)
Query: 1 MSGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDEL 60
MS A+P +S S ++TQ+++ Q V P+ G ++P VFVGGI E E+
Sbjct: 1 MSAANPETPNSTISREANTQSSSAATSQGYV---LPE-GKIMPNTVFVGGIDVRMDETEI 56
Query: 61 CELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAI 120
F++YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I F K+L + PAI
Sbjct: 57 RGFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQ--INFHGKKLKLGPAI 114
Query: 121 KKQGFTGTY 129
+KQ +
Sbjct: 115 RKQNLCAYH 123
>gi|297206885|ref|NP_001171972.1| deleted in azoospermia-like [Callithrix jacchus]
gi|27805456|sp|Q9BGN8.1|DAZL_CALJA RecName: Full=Deleted in azoospermia-like; AltName: Full=DAZ-like
autosomal; AltName: Full=Deleted in azoospermia-like 1
gi|12313706|gb|AAG50425.1|AF144131_1 DAZL1 [Callithrix jacchus]
Length = 296
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 7/149 (4%)
Query: 1 MSGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDEL 60
MS A+P +S S ++TQ+++ Q V P+ G ++P VFVGGI E E+
Sbjct: 1 MSAANPETPNSTISREANTQSSSAATSQGYV---LPE-GKIMPNTVFVGGIDVRMDETEI 56
Query: 61 CELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAI 120
F++YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I F K+L + PAI
Sbjct: 57 RGFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQ--INFHGKKLKLGPAI 114
Query: 121 KKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
+KQ + P V + PP N++
Sbjct: 115 RKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|45361607|ref|NP_989079.1| deleted in azoospermia-like [Xenopus (Silurana) tropicalis]
gi|82239896|sp|Q76CY5.1|DAZL_XENTR RecName: Full=Deleted in azoospermia-like; Short=DAZ-like protein;
AltName: Full=Xtdazl
gi|37857262|dbj|BAC99992.1| DAZ-like protein [Xenopus (Silurana) tropicalis]
gi|45709809|gb|AAH67947.1| DAZ-like protein [Xenopus (Silurana) tropicalis]
Length = 286
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G V+P VFVGGI T E + LF +YG VK +KI+ DR G+SKGYGF++F E + +
Sbjct: 25 GKVIPNTVFVGGIDITMDEMAIGNLFEKYGKVKDLKIITDRTGVSKGYGFVSFYDEVDVQ 84
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSP 138
++ K N F K+L + PAI+K TY + P V SP
Sbjct: 85 KIVKSQIN--FHGKKLKLGPAIRKMQRICTYVQTSPVVISP 123
>gi|126341688|ref|XP_001380250.1| PREDICTED: deleted in azoospermia-like [Monodelphis domestica]
Length = 301
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 41 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 100
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMYYHNGLPYTY 157
++ + N F K+L + PAI+KQ + P V +P PP P + + N TY
Sbjct: 101 KIVESQIN--FHGKKLKLGPAIRKQNLCAYHVQPRPLVFNP-PPAPQFHSVWSNPNTETY 157
>gi|395540241|ref|XP_003772066.1| PREDICTED: deleted in azoospermia-like [Sarcophilus harrisii]
Length = 332
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 72 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 131
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMYYHNGLPYTY 157
++ + I F K+L + PAI+KQ + P V +P PP P + + N TY
Sbjct: 132 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNP-PPAPQFHSVWSNPNTETY 188
>gi|49609419|emb|CAG34242.1| DAZL protein [Microcebus murinus]
Length = 296
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GRIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ F
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNF 119
>gi|54125551|gb|AAV30542.1| DAZ-like protein [Rana pipiens]
Length = 280
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G VVP VFVGGI + E+ + FS++G VK+VKI+ DRAG+SKGYGF++F + + +
Sbjct: 20 GKVVPNTVFVGGIDIRMDQHEIKDYFSKFGSVKEVKIITDRAGVSKGYGFVSFYDDIDVQ 79
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ ++ F KRL + PAI+KQ
Sbjct: 80 KIL----DVSFHGKRLKLGPAIRKQ 100
>gi|4468620|emb|CAB38076.1| DAZ protein [Macaca fascicularis]
Length = 817
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 1 MSGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNN--APKYGTVVPKRVFVGGITSTTTED 58
MS A+P +S S +STQ+++ AAV+ P+ G ++P VFVGGI
Sbjct: 1 MSAANPETPNSTSSRETSTQSSS-----AAVSQGYVLPE-GRIMPNTVFVGGIDDRMDAT 54
Query: 59 ELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAP 118
E+ F +YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I + K+L + P
Sbjct: 55 EIKSFFGRYGSVKEVKIITDRIGVSKGYGFVSFFNDVDVQKIVE--SQIHIQGKKLKLGP 112
Query: 119 AIKKQGF 125
AI+KQ
Sbjct: 113 AIRKQNL 119
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 3 GAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNN--APKYGTVVPKRVFVGGITSTTTEDEL 60
A+P +S S +STQ+++ AAV+ P+ G ++P VFVGGI E+
Sbjct: 228 AANPETPNSTSSRETSTQSSS-----AAVSQGYVLPE-GRIMPNTVFVGGIDDRMDATEI 281
Query: 61 CELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAI 120
F +YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I + K+L + PAI
Sbjct: 282 KSFFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVE--SQIHIQGKKLKLGPAI 339
Query: 121 KKQGF 125
+KQ
Sbjct: 340 RKQNL 344
>gi|198279563|emb|CAM32330.2| DAZ-like protein [Pelophylax lessonae]
Length = 282
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E+ + FS++G VK+VKI+ DRAG+SKGYGF++F + + +
Sbjct: 20 GKIVPNTVFVGGIDIRIDQHEIKDFFSKFGSVKEVKIITDRAGVSKGYGFVSFYDDIDIQ 79
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ DS I F KRL + PAI+KQ
Sbjct: 80 KI-VDS-QINFHGKRLKLGPAIRKQ 102
>gi|148223830|ref|NP_001081772.1| deleted in azoospermia-like-A [Xenopus laevis]
gi|82227742|sp|O57437.1|DAZLA_XENLA RecName: Full=Deleted in azoospermia-like-A; Short=DAZ-like protein
A; Short=xDazl-A
gi|2772904|gb|AAC41242.1| DAZ-like protein [Xenopus laevis]
Length = 286
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI T E E+ + F+++G VK+VKI+ DR G+SKGYGFI+F E + +
Sbjct: 28 GEIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDEVDVQ 87
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKK 122
++ K I F K+L + PAI+K
Sbjct: 88 KIVK--SQISFHGKKLKLGPAIRK 109
>gi|213623888|gb|AAI70359.1| DAZ-like protein [Xenopus laevis]
gi|213627663|gb|AAI70361.1| DAZ-like protein [Xenopus laevis]
Length = 286
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI T E E+ + F+++G VK+VKI+ DR G+SKGYGFI+F E + +
Sbjct: 28 GKIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDEVDVQ 87
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKK 122
++ K I F K+L + PAI+K
Sbjct: 88 KIVK--SQISFHGKKLKLGPAIRK 109
>gi|189484019|gb|ACE00303.1| DAZ-1 [Caenorhabditis brenneri]
Length = 147
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 29 AAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
AA+ P Y + P R+FVGG +TTE +L + F ++ VK VKIV G SKGYGF
Sbjct: 20 AAIIPAPPTY-ELFPNRIFVGGFPLSTTESDLRDHFERFFPVKDVKIVKSLDGQSKGYGF 78
Query: 89 ITFDSEEEAKRL-QKDSDNIMFKEKRLNIAPAIKKQGF----TGTYDSLPTVTSPVPPVP 143
ITF++E++A+ + Q D + F+ ++LN+ PAI+K + G + P P PP P
Sbjct: 79 ITFETEDQAEEIRQFDPKQLEFRNRKLNLGPAIRKMNYGAIPPGYAFAAPNQFYPAPPGP 138
>gi|299829262|ref|NP_001177740.1| deleted in azoospermia-like isoform 1 [Homo sapiens]
gi|57997575|emb|CAI45996.1| hypothetical protein [Homo sapiens]
gi|119584683|gb|EAW64279.1| deleted in azoospermia-like, isoform CRA_b [Homo sapiens]
gi|194381168|dbj|BAG64152.1| unnamed protein product [Homo sapiens]
Length = 315
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 6 PSEGSSNPSSPSSTQNNAFFNYQAAVNNNA----PKYGTVVPKRVFVGGITSTTTEDELC 61
P E ++NP +P+ST + ++ + P+ G ++P VFVGGI E E+
Sbjct: 19 PHESTANPETPNSTISREASTQSSSAATSQGYILPE-GKIMPNTVFVGGIDVRMDETEIR 77
Query: 62 ELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIK 121
F++YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I F K+L + PAI+
Sbjct: 78 SFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQ--INFHGKKLKLGPAIR 135
Query: 122 KQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
KQ + P V + PP N++
Sbjct: 136 KQNLCAYHVQPRPLVFNHPPPPQFQNVW 163
>gi|221044036|dbj|BAH13695.1| unnamed protein product [Homo sapiens]
Length = 606
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|320089597|ref|NP_065096.2| deleted in azoospermia protein 2 isoform 1 [Homo sapiens]
gi|218512098|sp|Q13117.3|DAZ2_HUMAN RecName: Full=Deleted in azoospermia protein 2
Length = 558
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|9651955|gb|AAF91329.1|AF248480_1 deleted in azoospermia 2 [Homo sapiens]
Length = 558
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|54292105|ref|NP_001005785.1| deleted in azoospermia protein 2 isoform 2 [Homo sapiens]
gi|16517074|gb|AAL24502.1| deleted in azoospermia 2 [Homo sapiens]
gi|86577764|gb|AAI13007.1| Deleted in azoospermia 2 [Homo sapiens]
Length = 534
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|114149264|sp|Q4V7Y4.2|DAZLB_XENLA RecName: Full=Deleted in azoospermia-like-B; Short=DAZ-like protein
B; Short=xDazl-B
Length = 286
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI T E E+ + F+++G VK+VKI+ DR G+SKGYGFI+F E + +
Sbjct: 28 GKIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDEVDIQ 87
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKK 122
++ K I F K+L + PAI+K
Sbjct: 88 KIVK--SQISFHGKKLKLGPAIRK 109
>gi|395734120|ref|XP_002814071.2| PREDICTED: LOW QUALITY PROTEIN: deleted in azoospermia-like [Pongo
abelii]
Length = 408
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 145 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 204
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
++ + N F K+L + PAI+KQ +
Sbjct: 205 KIVESQIN--FHGKKLKLGPAIRKQNLCAYH 233
>gi|66912041|gb|AAH97658.1| Dazl protein, partial [Xenopus laevis]
Length = 304
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI T E E+ + F+++G VK+VKI+ DR G+SKGYGFI+F E + +
Sbjct: 46 GKIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDEVDIQ 105
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKK 122
++ K I F K+L + PAI+K
Sbjct: 106 KIVK--SQISFHGKKLKLGPAIRK 127
>gi|47506938|gb|AAH71023.1| Dazl protein, partial [Xenopus laevis]
Length = 301
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI T E E+ + F+++G VK+VKI+ DR G+SKGYGFI+F E + +
Sbjct: 43 GKIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSKGYGFISFSDEVDIQ 102
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKK 122
++ K I F K+L + PAI+K
Sbjct: 103 KIVK--SQISFHGKKLKLGPAIRK 124
>gi|175377769|gb|ACB72413.1| DAZ-like protein alpha, partial [Xenopus (Silurana) sp. new
tetraploid 1]
Length = 250
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P VFVGGI T E + LF +YG VK +KI+ DR G+SKGYGF++FD E + +++
Sbjct: 1 IPNTVFVGGIDITMDEMAIGNLFEKYGKVKDLKIITDRTGVSKGYGFVSFDDEVDVQKIV 60
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
K N F K+L + PAI+K TY TSPV P + +
Sbjct: 61 KSQIN--FHGKKLKLGPAIRKMQRICTY----VQTSPVAISPPTQFH 101
>gi|224365185|gb|ACN41233.1| deleted in azoospermia-like protein [Trachemys scripta]
Length = 258
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F + +++
Sbjct: 1 MPNTVFVGGIDIRMDETEIRSFFARYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQKIV 60
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTY 157
+ N F K+L + PAI+KQ Y P PPVP + + N TY
Sbjct: 61 ESQIN--FHGKKLKLGPAIRKQQNLCAYHVQPRHLGFNPPVPQFHSVWSNQNTETY 114
>gi|156390322|ref|XP_001635220.1| predicted protein [Nematostella vectensis]
gi|156222311|gb|EDO43157.1| predicted protein [Nematostella vectensis]
Length = 191
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G P ++FVGG+ TT +EL F+ +G V + K++ D GISKGYGF++F S+E+
Sbjct: 8 GKRYPNKIFVGGLPPLTTAEELANFFANFGHVVESKVIFDHDGISKGYGFVSFRSQEDVS 67
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYH 150
+ K + + K+LN+ PA+KK+ ++P T VP P+ +YY+
Sbjct: 68 CV-KAMGTLFLRNKKLNLGPAVKKE----LASNIPPETVIVPNAPSKGVYYY 114
>gi|3265048|gb|AAC72067.1| DAZ protein, partial [Papio anubis]
Length = 121
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 13 PSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQ 72
P+S S + N AA + + G ++P VFVGGI E E+ F +YG VK+
Sbjct: 2 PNSTISRETNTQSASAAASHGHVLPEGKIMPNTVFVGGIDDRMDETEIGSCFGRYGSVKE 61
Query: 73 VKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
VKI+ DR G+SKGYGF++F ++ + +++ + I F K+L + PAI+KQ
Sbjct: 62 VKIITDRTGVSKGYGFVSFFNDVDIQKILE--SQIHFHGKKLKLGPAIRKQ 110
>gi|44887842|sp|Q9NR90.1|DAZ3_HUMAN RecName: Full=Deleted in azoospermia protein 3
gi|9651957|gb|AAF91330.1|AF248481_1 deleted in azoospermia 3 [Homo sapiens]
Length = 486
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|223696901|gb|ACN18106.1| deleted in azoospermia A, partial [Macaca mulatta]
Length = 551
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F +YG VK+VKI++DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGINDRMDETEVRSCFGRYGSVKEVKIIMDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + I F K+L + PAI+KQ
Sbjct: 95 KIVESQ--IHFHGKKLKLGPAIRKQ 117
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F +YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 200 GKIMPNTVFVGGIDDRMDETEIRSYFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 259
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + I F K+L + PAI+KQ
Sbjct: 260 KIIESQ--IHFHGKKLKLGPAIRKQ 282
>gi|338714804|ref|XP_001494705.3| PREDICTED: deleted in azoospermia-like [Equus caballus]
Length = 425
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P +FVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 165 GKIMPNTIFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 224
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
++ + N F K+L + PAI+KQ +
Sbjct: 225 KIVESQIN--FHGKKLKLGPAIRKQNLCAYH 253
>gi|451329813|gb|AGF37543.1| deleted in azoospermia-like protein, partial [Capra hircus]
Length = 201
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 13 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 72
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 73 KIVESQIN--FHGKKLKLGPAIRKQNL 97
>gi|54292110|ref|NP_065097.2| deleted in azoospermia protein 3 [Homo sapiens]
gi|86577762|gb|AAI13006.1| Deleted in azoospermia 3 [Homo sapiens]
Length = 438
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|297286963|ref|XP_002803072.1| PREDICTED: deleted in azoospermia B [Macaca mulatta]
Length = 316
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 56 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 115
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 116 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 164
>gi|9652115|gb|AAF91405.1|AF271087_1 deleted in azoospermia [Homo sapiens]
Length = 458
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 79 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 138
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 139 KI--VGSQIHFHGKKLKLGPAIRKQ 161
>gi|344288201|ref|XP_003415839.1| PREDICTED: deleted in azoospermia-like [Loxodonta africana]
Length = 299
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 39 GKIMPNTVFVGGIDVRMDESEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 98
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 99 KIVESQIN--FHGKKLKLGPAIRKQNL 123
>gi|355477208|gb|AES12481.1| DAZ-like protein [Eleutherodactylus coqui]
Length = 267
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI E ++ E S++G VK+VKI+ DR G+SKGYGF++F + + +
Sbjct: 22 GKIVPNTVFVGGIDVRMEEIDIKEFSSKFGNVKEVKIITDRTGMSKGYGFVSFYDDVDVQ 81
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP-TVTSPVP 140
++ + I F KRL + PAI+KQ + P V SP P
Sbjct: 82 KIVE--SQISFHGKRLKLGPAIRKQNASTYLQQRPIIVNSPAP 122
>gi|156901526|gb|ABU96753.1| deleted in azoospermia-like protein variant 1 [Bubalus bubalis]
Length = 105
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 4 GKIMPNTVFVGGIDIRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 63
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPP 141
++ + N F K+L + PAI+KQ + P V +P PP
Sbjct: 64 KIVESQIN--FHGKKLKLGPAIRKQNLCAYHVQPRPLVFNPPPP 105
>gi|395816570|ref|XP_003781774.1| PREDICTED: deleted in azoospermia-like [Otolemur garnettii]
Length = 295
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNL 119
>gi|149069522|gb|EDM18963.1| rCG43598, isoform CRA_a [Rattus norvegicus]
Length = 298
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
++ + I F K+L + PAI+KQ TY P
Sbjct: 95 KIVE--SQINFHGKKLKLGPAIRKQNLC-TYHVQP 126
>gi|281345886|gb|EFB21470.1| hypothetical protein PANDA_003375 [Ailuropoda melanoleuca]
Length = 278
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNL 119
>gi|32698734|ref|NP_065153.1| deleted in azoospermia protein 4 isoform 2 [Homo sapiens]
gi|28704071|gb|AAH47480.1| Deleted in azoospermia 4 [Homo sapiens]
gi|28838807|gb|AAH47617.1| Deleted in azoospermia 4 [Homo sapiens]
Length = 390
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|1658368|gb|AAB63596.1| an autosomal gene similar to the azoospermia factor candidate gene
DAZ on the Y chromosome [Homo sapiens]
Length = 295
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|188497665|ref|NP_034151.3| deleted in azoospermia-like [Mus musculus]
gi|27805452|sp|Q64368.1|DAZL_MOUSE RecName: Full=Deleted in azoospermia-like; AltName: Full=DAZ-like
autosomal; AltName: Full=Deleted in azoospermia-like 1
gi|1149562|gb|AAB46608.1| putative RNA binding protein [Mus musculus]
gi|1236172|emb|CAA65039.1| RNA recognition motif protein [Mus musculus]
gi|1491805|gb|AAC52711.1| Dazh [Mus musculus]
gi|12852939|dbj|BAB29585.1| unnamed protein product [Mus musculus]
gi|148691697|gb|EDL23644.1| deleted in azoospermia-like, isoform CRA_b [Mus musculus]
gi|1588731|prf||2209321A Dazla gene
Length = 298
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
++ + I F K+L + PAI+KQ TY P
Sbjct: 95 KIVE--SQINFHGKKLKLGPAIRKQNLC-TYHVQP 126
>gi|354477479|ref|XP_003500947.1| PREDICTED: deleted in azoospermia-like [Cricetulus griseus]
Length = 311
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 48 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 107
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
++ + N F K+L + PAI+KQ +
Sbjct: 108 KIVESQIN--FHGKKLKLGPAIRKQNLCAYH 136
>gi|71534050|gb|AAH99940.1| Deleted in azoospermia-like [Mus musculus]
Length = 298
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
++ + I F K+L + PAI+KQ TY P
Sbjct: 95 KIVE--SQINFHGKKLKLGPAIRKQNLC-TYHVQP 126
>gi|26328897|dbj|BAC28187.1| unnamed protein product [Mus musculus]
Length = 298
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
++ + N F K+L + PAI+KQ TY P
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNLC-TYHVQP 126
>gi|301759106|ref|XP_002915401.1| PREDICTED: deleted in azoospermia-like [Ailuropoda melanoleuca]
Length = 295
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNL 119
>gi|1045308|gb|AAB02393.1| DAZ protein [Homo sapiens]
gi|1586350|prf||2203416A RNA-binding protein
Length = 366
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|27805455|sp|Q95192.3|DAZL_MACFA RecName: Full=Deleted in azoospermia-like; AltName: Full=DAZ-like
autosomal; AltName: Full=Deleted in azoospermia-like 1
gi|12313708|gb|AAG50426.1|AF144132_1 DAZL1 [Macaca fascicularis]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|157821341|ref|NP_001102884.1| deleted in azoospermia protein 3 [Rattus norvegicus]
gi|149069523|gb|EDM18964.1| rCG43598, isoform CRA_b [Rattus norvegicus]
Length = 281
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
++ + I F K+L + PAI+KQ TY P
Sbjct: 95 KIVE--SQINFHGKKLKLGPAIRKQNLC-TYHVQP 126
>gi|403318293|gb|AFR36910.1| dazl protein [Capra hircus]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNL 119
>gi|402861654|ref|XP_003895201.1| PREDICTED: deleted in azoospermia-like [Papio anubis]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|345789132|ref|XP_534251.3| PREDICTED: deleted in azoospermia-like [Canis lupus familiaris]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNL 119
>gi|320089600|ref|NP_001005786.2| deleted in azoospermia protein 2 isoform 3 [Homo sapiens]
Length = 366
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|49609413|emb|CAG30560.1| DAZL protein [Pan paniscus]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|291399679|ref|XP_002716229.1| PREDICTED: deleted in azoospermia-like protein-like [Oryctolagus
cuniculus]
Length = 482
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 222 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 281
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + I F K+L + PAI+KQ
Sbjct: 282 KIVE--SQINFHGKKLKLGPAIRKQNL 306
>gi|148691698|gb|EDL23645.1| deleted in azoospermia-like, isoform CRA_c [Mus musculus]
Length = 281
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
++ + I F K+L + PAI+KQ TY P
Sbjct: 95 KIVE--SQINFHGKKLKLGPAIRKQNLC-TYHVQP 126
>gi|426219582|ref|XP_004003998.1| PREDICTED: deleted in azoospermia-like [Ovis aries]
Length = 300
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 40 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 99
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 100 KIVESQIN--FHGKKLKLGPAIRKQNL 124
>gi|2959896|emb|CAA68233.1| RNA-binding protein [Macaca fascicularis]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + N F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|332816216|ref|XP_516314.3| PREDICTED: deleted in azoospermia-like [Pan troglodytes]
gi|397511770|ref|XP_003826239.1| PREDICTED: deleted in azoospermia-like [Pan paniscus]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|9652117|gb|AAF91406.1|AF271088_1 deleted in azoospermia [Homo sapiens]
Length = 501
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 122 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 181
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 182 KI--VGSQIHFHGKKLKLGPAIRKQ 204
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 83 SKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
SKGYGF++F ++ + +++ I F K+L + PAI+KQ
Sbjct: 1 SKGYGFVSFVNDVDVQKI--VGSQIHFHGKKLKLGPAIRKQ 39
>gi|25121978|ref|NP_001342.2| deleted in azoospermia-like isoform 2 [Homo sapiens]
gi|426339634|ref|XP_004033750.1| PREDICTED: deleted in azoospermia-like [Gorilla gorilla gorilla]
gi|27805453|sp|Q92904.1|DAZL_HUMAN RecName: Full=Deleted in azoospermia-like; AltName: Full=DAZ
homolog; AltName: Full=DAZ-like autosomal; AltName:
Full=Deleted in azoospermia-like 1; AltName:
Full=SPGY-like-autosomal
gi|1654353|gb|AAC50813.1| RNA binding protein [Homo sapiens]
gi|1765981|gb|AAB39935.1| germline specific RNA binding protein [Homo sapiens]
gi|20379546|gb|AAH27595.1| Deleted in azoospermia-like [Homo sapiens]
gi|119584682|gb|EAW64278.1| deleted in azoospermia-like, isoform CRA_a [Homo sapiens]
gi|157928783|gb|ABW03677.1| deleted in azoospermia-like [synthetic construct]
gi|261860374|dbj|BAI46709.1| deleted in azoospermia-like [synthetic construct]
Length = 295
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|440905610|gb|ELR55973.1| Deleted in azoospermia-like protein, partial [Bos grunniens mutus]
Length = 297
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + I F K+L + PAI+KQ
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNL 119
>gi|126165307|ref|NP_001075194.1| deleted in azoospermia-like [Bos taurus]
gi|89475213|gb|ABD73127.1| deleted in azoospermia-like transcript variant 1 [Bos taurus]
gi|89475217|gb|ABD73128.1| deleted in azoospermia-like transcript variant 2 [Bos taurus]
gi|154001277|gb|ABS57164.1| deleted in azoospermia-like protein [Bos taurus]
gi|296490801|tpg|DAA32914.1| TPA: deleted in azoospermia-like [Bos taurus]
Length = 295
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNL 119
>gi|449281643|gb|EMC88679.1| Deleted in azoospermia-like protein, partial [Columba livia]
Length = 289
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F +YG VK+VKI+ DR G+SKGYGF++F + +
Sbjct: 31 GKIMPNTVFVGGIDIRMNEAEIRSFFERYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQ 90
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMYYHNGLPYTY 157
++ + N F KRL + PAI+KQ +Y P V + PP P + + N TY
Sbjct: 91 KIVESQIN--FHGKRLKLGPAIRKQQNLCSYVHPRPLVFN--PPAPQFHSVWGNQNTETY 146
>gi|345321973|ref|XP_001514729.2| PREDICTED: deleted in azoospermia-like [Ornithorhynchus anatinus]
Length = 332
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P +FVGGI E EL F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 72 GKIMPNTIFVGGIDVRMDETELRGFFTRYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 131
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMYYHN 151
++ + N F K+L + PAI+KQ + P +P PP P +HN
Sbjct: 132 KIIESQVN--FHGKKLKLGPAIRKQSLCNYHVQPRPMAFNP-PPAPQ----FHN 178
>gi|14280018|gb|AAK58846.1|AF308872_1 RNA-binding protein Axdazl [Ambystoma mexicanum]
Length = 266
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P VFVGGI E E+ + F+++G VK+VKI+ DR G+SKGYGF++F + + +++
Sbjct: 1 MPNTVFVGGIDIRMDEIEIRDFFARFGAVKEVKIITDRTGVSKGYGFVSFHDDVDVQKI- 59
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYY--HNGLPYTYHN 159
DS I F K+L + PAI+KQ Y P PP P + + N Y H
Sbjct: 60 VDS-QINFHGKKLKLGPAIRKQQNLCAYHVQPRPMVLNPPAPQFHSMWSSQNAETYMQHP 118
Query: 160 GMAFFPSNGQSMVPTSPPTVPTQ 182
M S VP P P Q
Sbjct: 119 HMI-------SPVPQYVPAYPYQ 134
>gi|195174540|ref|XP_002028031.1| GL15077 [Drosophila persimilis]
gi|194115753|gb|EDW37796.1| GL15077 [Drosophila persimilis]
Length = 113
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 22/89 (24%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
APKYGT++P R+FVGGI+ TTE +L +FS YG VK KI+VDRAG
Sbjct: 23 APKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAG------------- 69
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ ++ ++++LNIAPAIKKQ
Sbjct: 70 ---------GECVVLRDRKLNIAPAIKKQ 89
>gi|410060059|ref|XP_001138045.3| PREDICTED: deleted in azoospermia protein 2 isoform 5 [Pan
troglodytes]
Length = 534
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDDRTDETEIRSFFGRYGSVKEVKRIRNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|91064844|dbj|BAE93142.1| Cb-DAZ-1 [Caenorhabditis briggsae]
Length = 224
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP ++P R+FVGG +TTE EL + F ++ VK VK+V G SKGYGFITF++E
Sbjct: 63 APPTYELIPNRIFVGGFPVSTTESELRDHFERFYPVKDVKMVKSLDGHSKGYGFITFETE 122
Query: 95 EEAKRLQK-DSDNIMFKEKRLNIAPAIKK 122
++A++++ + + F+ ++LN+ PAI+K
Sbjct: 123 DQAEKIRHLNPKKLEFRNRKLNLGPAIRK 151
>gi|268531188|ref|XP_002630720.1| C. briggsae CBR-DAZ-1 protein [Caenorhabditis briggsae]
Length = 224
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
AP ++P R+FVGG +TTE EL + F ++ VK VK+V G SKGYGFITF++E
Sbjct: 63 APPTYELIPNRIFVGGFPVSTTESELRDHFERFYPVKDVKMVKSLDGHSKGYGFITFETE 122
Query: 95 EEAKRLQK-DSDNIMFKEKRLNIAPAIKK 122
++A++++ + + F+ ++LN+ PAI+K
Sbjct: 123 DQAEKIRHLNPKKLEFRNRKLNLGPAIRK 151
>gi|9651961|gb|AAF91332.1|AF248483_1 deleted in azoospermia 4 [Homo sapiens]
Length = 413
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 34 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIISNRTGVSKGYGFVSFVNDVDVQ 93
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 94 KI--VGSQIHFHGKKLKLGPAIRKQ 116
>gi|335298708|ref|XP_003358369.1| PREDICTED: deleted in azoospermia-like [Sus scrofa]
Length = 295
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P +FVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTIFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
++ + N F K+L + PAI+KQ +
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNLCAYH 123
>gi|384941178|gb|AFI34194.1| deleted in azoospermia-like isoform 2 [Macaca mulatta]
gi|384941180|gb|AFI34195.1| deleted in azoospermia-like isoform 2 [Macaca mulatta]
Length = 295
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKKVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|348588615|ref|XP_003480060.1| PREDICTED: deleted in azoospermia-like [Cavia porcellus]
Length = 303
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P +FVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 40 GKIMPNTIFVGGIDIRMDESEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 99
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 100 KIVESQIN--FHGKKLKLGPAIRKQNL 124
>gi|54292113|ref|NP_001005375.1| deleted in azoospermia protein 4 isoform 1 [Homo sapiens]
gi|44887840|sp|Q86SG3.2|DAZ4_HUMAN RecName: Full=Deleted in azoospermia protein 4
Length = 579
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 200 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 259
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 260 KI--VGSQIHFHGKKLKLGPAIRKQ 282
>gi|388827881|gb|ACN18107.2| deleted in azoospermia B, partial [Macaca mulatta]
Length = 559
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 1 MSGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNN--APKYGTVVPKRVFVGGITSTTTED 58
M A+P +S S +STQ+++ AAV+ P+ G ++P VFVGGI
Sbjct: 1 MPAANPETPNSTSSRETSTQSSS-----AAVSQGYVLPE-GRIMPNTVFVGGIDDRMDAT 54
Query: 59 ELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAP 118
E+ F +YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I + K+L + P
Sbjct: 55 EIKSFFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVE--SQIHIQGKKLKLGP 112
Query: 119 AIKKQGF 125
AI+KQ
Sbjct: 113 AIRKQNL 119
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 3 GAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNN--APKYGTVVPKRVFVGGITSTTTEDEL 60
A+P +S S +STQ+++ AAV+ P+ G ++P VFVGGI E+
Sbjct: 233 AANPETPNSTSSRETSTQSSS-----AAVSQGYVLPE-GRIMPNTVFVGGIDDRMDATEI 286
Query: 61 CELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAI 120
F +YG VK+VKI+ DR G+SKGYGF++F ++ + +++ + I + K+L + PAI
Sbjct: 287 KSFFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVE--SQIHIQGKKLKLGPAI 344
Query: 121 KKQGF 125
+KQ
Sbjct: 345 RKQNL 349
>gi|410060061|ref|XP_001138549.3| PREDICTED: deleted in azoospermia protein 2 isoform 4 [Pan
troglodytes]
Length = 438
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDDRTDETEIRSFFGRYGSVKEVKRIRNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|189181654|ref|NP_004072.3| deleted in azoospermia protein 1 [Homo sapiens]
gi|44887841|sp|Q9NQZ3.2|DAZ1_HUMAN RecName: Full=Deleted in azoospermia protein 1
Length = 744
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 200 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 259
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 260 KI--VGSQIHFHGKKLKLGPAIRKQ 282
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 365 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 424
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 425 KI--VGSQIHFHGKKLKLGPAIRKQ 447
>gi|351707572|gb|EHB10491.1| Deleted in azoospermia-like protein [Heterocephalus glaber]
Length = 281
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P +FVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTIFVGGIDIRMDESEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + I F K+L + PAI+KQ
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNL 119
>gi|410060038|ref|XP_003319020.2| PREDICTED: deleted in azoospermia protein 1 isoform 1 [Pan
troglodytes]
Length = 723
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDDRTDETEIRSFFGRYGSVKEVKRIRNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYGF++F ++ + +
Sbjct: 200 GKIVPNTVFVGGIDDRTDETEIRSFFGRYGSVKEVKRIRNRTGVSKGYGFVSFVNDVDVQ 259
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 260 KI--VGSQIHFHGKKLKLGPAIRKQ 282
>gi|114691606|ref|XP_001147552.1| PREDICTED: deleted in azoospermia protein 1 isoform 7 [Pan
troglodytes]
Length = 414
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDDRTDETEIRSFFGRYGSVKEVKRIRNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
>gi|3249573|gb|AAC72065.1| DAZL1 protein [Macaca mulatta]
Length = 119
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 4 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 63
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + N F K+L + PAI+KQ + P V + PP N++
Sbjct: 64 KIVESQIN--FHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 112
>gi|170592311|ref|XP_001900912.1| DAZ protein 1. [Brugia malayi]
gi|158591607|gb|EDP30212.1| DAZ protein 1., putative [Brugia malayi]
Length = 448
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 36 PKYGTVVPKRVFVGGITST-------------TTEDELCELFSQYGIVKQVKIVVDRAGI 82
P+ ++P R+FVGG +T TTE +L F ++G V++ K++ G
Sbjct: 46 PRTFEMIPHRIFVGGFPATATILICIKLTDLQTTELDLRLFFEKFGHVREAKVIRSSEGT 105
Query: 83 SKGYGFITFDSEEEAKRL-----QKDSDNIMFKEKRLNIAPAIKK 122
SKGYGFITFD+E+EAK + ++++ + FK +RLN+ PAI++
Sbjct: 106 SKGYGFITFDTEDEAKTVMQISANQEAEKLEFKGRRLNLGPAIRR 150
>gi|326921961|ref|XP_003207222.1| PREDICTED: deleted in azoospermia-like [Meleagris gallopavo]
Length = 291
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F QYG VK+VKI+ DR G+SKGYGF++F + +
Sbjct: 33 GKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQ 92
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTY 157
++ + I KRL + PAI+KQ +Y P + PP P + + N TY
Sbjct: 93 KIVE--SQISVHGKRLKLGPAIRKQQNLCSYVQ-PRPLAFNPPAPQFHSVWSNQNTETY 148
>gi|175377740|gb|ACB72412.1| DAZ-like protein alpha, partial [Xenopus (Silurana) epitropicalis]
Length = 250
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P VFVGGI T E + LF +YG VK +KI+ DR G+SKGYGF++F E + +++
Sbjct: 1 IPNTVFVGGIDITMDEMAIGNLFEKYGKVKDLKIITDRTGVSKGYGFVSFYDEVDVQKIV 60
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSP 138
K N F K+L + PAI+K TY + P V SP
Sbjct: 61 KSQIN--FHGKKLKLGPAIRKMQRICTYVQTSPVVISP 96
>gi|397560458|gb|AFO54704.1| deleted in azoospermia 1, partial [Macaca fascicularis]
Length = 163
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F +YG VK+VKI++DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGINDRMDETEVRSCFGRYGSVKEVKIIMDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
++ + I F K+L + PAI+KQ +
Sbjct: 95 KIVESQ--IHFHGKKLKLGPAIRKQKLCARH 123
>gi|449673126|ref|XP_004207872.1| PREDICTED: uncharacterized protein LOC101239467 [Hydra
magnipapillata]
Length = 354
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 14/135 (10%)
Query: 50 GITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMF 109
G S T E+EL + FSQYG VK+ KI+ D IS+G+ F+TF+ +++A + Q+ + F
Sbjct: 3 GDHSETKEEELKDFFSQYGKVKECKIIKDNQSISRGFAFVTFECKQDAVKTQQ-LGTVFF 61
Query: 110 KEKRLNIAPAIKKQG--FTGTYDSLPTVTSPVPPVPTSNMYYH-NGLPYTYH-NGMAFFP 165
+K+LN+ PAI+++G F GT + PV ++ +Y H +G YT NG+ +F
Sbjct: 62 NQKKLNLGPAIRQKGVVFNGTKEVENE------PVLSTGVYIHPSGYSYTVAPNGVWYFH 115
Query: 166 -SNGQ--SMVPTSPP 177
S+G+ + VP SPP
Sbjct: 116 NSDGKPPTRVPGSPP 130
>gi|92097599|gb|AAI14928.1| DAZ1 protein [Homo sapiens]
Length = 613
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KI--VGSQIHFHGKKLKLGPAIRKQ 117
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 200 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 259
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 260 KI--VGSQIHFHGKKLKLGPAIRKQ 282
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 365 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 424
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 425 KI--VGSQIHFHGKKLKLGPAIRKQ 447
>gi|349587556|pdb|2XS2|A Chain A, Crystal Structure Of The Rrm Domain Of Mouse Deleted In
Azoospermia-Like In Complex With Rna, Uuguucuu
Length = 102
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 5 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 64
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
++ + N F K+L + PAI+KQ + TY P
Sbjct: 65 KIVESQIN--FHGKKLKLGPAIRKQNLS-TYHVQP 96
>gi|449493088|ref|XP_002194001.2| PREDICTED: deleted in azoospermia-like [Taeniopygia guttata]
Length = 329
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G V+P VFV G+ E E+ +F QYG VK+VK++ DR+G+SKGYGF++F + +
Sbjct: 79 GKVMPNTVFVAGVDLRMNEAEIRSVFEQYGTVKEVKVITDRSGVSKGYGFVSFLDNVDVQ 138
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + N F K+L + PAI+KQ
Sbjct: 139 KIVESQIN--FHGKKLKLGPAIRKQ 161
>gi|45383684|ref|NP_989549.1| deleted in azoospermia-like [Gallus gallus]
gi|44887839|sp|Q804A9.1|DAZL_CHICK RecName: Full=Deleted in azoospermia-like; Short=DAZ-like protein
gi|28136293|gb|AAO26019.1| deleted azoospermia-like protein [Gallus gallus]
Length = 289
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F QYG VK+VKI+ DR G+SKGYGF++F + +
Sbjct: 31 GKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQ 90
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTY 157
++ + I KRL + PAI+KQ +Y P + PP P + + N TY
Sbjct: 91 KIVE--SQISVHGKRLKLGPAIRKQQNLCSYMQ-PRPLAFNPPAPQFHSVWTNQNTETY 146
>gi|3249571|gb|AAC72064.1| DAZL1 protein [Papio anubis]
Length = 119
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 4 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 63
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + N F K+L + PAI++Q + P V + PP N++
Sbjct: 64 KIVESQIN--FHGKKLKLGPAIRRQNLCAYHVQPRPLVFNHPPPPQFQNVW 112
>gi|332232432|ref|XP_003265409.1| PREDICTED: deleted in azoospermia-like [Nomascus leucogenys]
Length = 295
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ D+ G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDQTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY-DSLPTVTSPVPPVPTSNMY 148
++ + I F K+L + PAI+KQ + P V + PP N++
Sbjct: 95 KIVESQ--INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVW 143
>gi|156395700|ref|XP_001637248.1| predicted protein [Nematostella vectensis]
gi|156224359|gb|EDO45185.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P R+FVGG+ TT EL ELF YG V+ VKI D G+S+GYGF+TF +++AK++ K
Sbjct: 9 PNRIFVGGVAFQTTAIELRELFESYGAVRDVKIARDGEGVSRGYGFVTFFRDDDAKKVFK 68
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFT 126
+ +K KRL I A +K FT
Sbjct: 69 -LGTVFYKGKRLVIGEAYRKLQFT 91
>gi|2612859|gb|AAB84361.1| DAZLA protein [Homo sapiens]
Length = 295
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG V +VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 35 GKIMPNTVFVGGIDVRMDEXEIRSFFARYGSVXEVKIITDRTGVSKGYGFVSFFNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + N F K+L + PAI+KQ
Sbjct: 95 KIVESQIN--FHGKKLKLGPAIRKQNL 119
>gi|198411890|ref|XP_002120183.1| PREDICTED: similar to bol, boule-like (Drosophila), partial [Ciona
intestinalis]
Length = 265
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 55 TTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRL 114
T E++L + F YG+VK KI+ DRA +SKGYGF+TF++ EEA R++ D + K+L
Sbjct: 1 TKEEDLQKFFCNYGMVKDTKIIRDRADVSKGYGFVTFETSEEADRVRDQEDCLYLNGKKL 60
Query: 115 NIAPAIKKQ 123
NI AI+KQ
Sbjct: 61 NIGQAIRKQ 69
>gi|156382516|ref|XP_001632599.1| predicted protein [Nematostella vectensis]
gi|156219657|gb|EDO40536.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
+ P RVFVGG+ TTE EL FS +G V V+IV D R G++KG+GFITF EE AK+
Sbjct: 14 IYPTRVFVGGLARGTTELELETFFSNFGPVADVRIVCDRRTGLNKGFGFITFSLEEPAKK 73
Query: 100 LQKDSDNIMFKEKRLNIAPAIKKQG 124
L + +NI FK + L + AI+K+G
Sbjct: 74 L-IEQNNIDFKGRSLRLRQAIRKKG 97
>gi|9651959|gb|AAF91331.1|AF248482_1 deleted in azoospermia 4 [Homo sapiens]
Length = 331
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 35 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 94
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 95 KIV--GSQIHFHGKKLKLGPAIRKQ 117
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI + E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +
Sbjct: 200 GKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ 259
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 260 KIV--GSQIHFHGKKLKLGPAIRKQ 282
>gi|340763931|gb|AEK69206.1| boule-like protein 2 [Macrostomum lignano]
Length = 503
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQY---GIVKQVKIVVDRAGISKGYGFITFDSEEE 96
TV+ R+FVGGI S EL ++ +K +KI+ D+ G+SKGYGF+TF++ E
Sbjct: 39 TVIENRIFVGGIPSHANVSELRAFLAEKFNKAEIKDIKIISDKTGVSKGYGFVTFETREM 98
Query: 97 AKRLQKDS--DNIMFKEKRLNIAPAIKK 122
A+ + S DNI+FK+++LNI+ A+KK
Sbjct: 99 AQAILNSSEYDNIIFKDRKLNISKAVKK 126
>gi|327274927|ref|XP_003222226.1| PREDICTED: deleted in azoospermia-like [Anolis carolinensis]
Length = 308
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F + +
Sbjct: 51 GKIMPNTVFVGGIDIRMDETEIRNFFARYGTVKEVKIITDRTGVSKGYGFVSFLDNVDVQ 110
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPT---VTSPVP 140
++ + I F K+L + PAI+K Y P + SP P
Sbjct: 111 KIVESQ--INFHGKKLKLGPAIRKHPNLCAYHVPPRPVLINSPTP 153
>gi|3265054|gb|AAC72070.1| DAZ protein, partial [Macaca mulatta]
Length = 121
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F +YG VK+VKI++DR G+SKGYGF++F ++ + +
Sbjct: 28 GKIMPNTVFVGGINDRMDETEVRSCFGRYGSVKEVKIIMDRTGVSKGYGFVSFFNDVDVQ 87
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + I F K+L + PAI+KQ
Sbjct: 88 KIVE--SQIHFHGKKLKLGPAIRKQ 110
>gi|3265052|gb|AAC72069.1| DAZ protein, partial [Macaca mulatta]
Length = 121
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F +YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 28 GKIMPNTVFVGGIDDRMDETEIGSCFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 87
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + I F K+L + PAI+KQ
Sbjct: 88 KIIE--SQIHFHGKKLKLGPAIRKQ 110
>gi|349587564|pdb|2XSF|A Chain A, Crystal Structure Of The Rrm Domain Of Mouse Deleted In
Azoospermia-Like
Length = 89
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 6 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 65
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + N F K+L + PAI+KQ
Sbjct: 66 KIVESQIN--FHGKKLKLGPAIRKQ 88
>gi|74144391|dbj|BAE36048.1| unnamed protein product [Mus musculus]
gi|148691696|gb|EDL23643.1| deleted in azoospermia-like, isoform CRA_a [Mus musculus]
Length = 261
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +++
Sbjct: 1 MPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIV 60
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLP 133
+ N F K+L + PAI+KQ TY P
Sbjct: 61 ESQIN--FHGKKLKLGPAIRKQNLC-TYHVQP 89
>gi|3249569|gb|AAC72063.1| DAZL1 protein [Pan troglodytes]
Length = 97
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 4 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 63
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + N F K+L + PAI+KQ
Sbjct: 64 KIVESQIN--FHGKKLKLGPAIRKQ 86
>gi|166831522|gb|ABY89722.1| deleted in azoospermia-like protein [Sus scrofa]
Length = 276
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P +F GGI E E+ F++YG VK+VKI DR G+SKGYGF++F ++ + +
Sbjct: 34 GKIMPNTIFAGGIDVRMDETEIRSFFARYGSVKEVKIFTDRTGVSKGYGFVSFYNDVDVQ 93
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGF 125
++ + I F K+L + PAI+KQ
Sbjct: 94 KIVESQ--INFHGKKLKLGPAIRKQNL 118
>gi|349587558|pdb|2XS5|A Chain A, Crystal Structure Of The Rrm Domain Of Mouse Deleted In
Azoospermia-Like In Complex With Mvh Rna, Uguuc
gi|349587559|pdb|2XS5|B Chain B, Crystal Structure Of The Rrm Domain Of Mouse Deleted In
Azoospermia-Like In Complex With Mvh Rna, Uguuc
gi|349587562|pdb|2XS7|A Chain A, Crystal Structure Of The Rrm Domain Of Mouse Deleted In
Azoospermia-Like In Complex With Sycp3 Rna, Uuguuu
Length = 87
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 5 GKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQ 64
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + N F K+L + PAI+KQ
Sbjct: 65 KIVESQIN--FHGKKLKLGPAIRKQ 87
>gi|431917008|gb|ELK16764.1| Deleted in azoospermia-like protein [Pteropus alecto]
Length = 387
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +++
Sbjct: 1 MPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIV 60
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGF 125
+ N F K+L + PAI+KQ
Sbjct: 61 ESQIN--FHGKKLKLGPAIRKQNL 82
>gi|62287767|gb|AAX78369.1| DAZ [Pan troglodytes]
Length = 164
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYGF++F ++ + +
Sbjct: 33 GKIVPNTVFVGGIDDRTDETEIRSFFGRYGSVKEVKRIRNRTGVSKGYGFVSFVNDVDVQ 92
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 93 KIV--GSQIHFHGKKLKLGPAIRKQ 115
>gi|308493483|ref|XP_003108931.1| CRE-DAZ-1 protein [Caenorhabditis remanei]
gi|308247488|gb|EFO91440.1| CRE-DAZ-1 protein [Caenorhabditis remanei]
Length = 466
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 35 APKYGTVVPKRVFVGG--------------ITSTTTEDELCELFSQYGIVKQVKIVVDRA 80
AP ++P R+FVGG I TTE +L E F ++ VK VK+V
Sbjct: 56 APPTYELIPNRIFVGGFPVNVSCFVLLQYSIIFETTESDLREHFEKFFPVKDVKMVKSLD 115
Query: 81 GISKGYGFITFDSEEEAKRL-QKDSDNIMFKEKRLNIAPAIKK 122
G+SKGYGFITF++E++A+ + Q + + F+ ++LN+ PAI+K
Sbjct: 116 GVSKGYGFITFETEDQAEEIRQLNPKQLEFRSRKLNLGPAIRK 158
>gi|3249575|gb|AAC72066.1| DAZL1 protein [Cebus apella]
Length = 97
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E E+ F++YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 4 GKIMPNTVFVGGIDVRMDETEIRSSFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 63
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + N F K+L + PAI+KQ
Sbjct: 64 KIVESQIN--FHGKKLKLGPAIRKQ 86
>gi|357627546|gb|EHJ77203.1| boule protein [Danaus plexippus]
Length = 151
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDS 93
+APK+GTV+ R+FVGG + TTT+++L + FS + V +++ DRAG+SK YGF+TF S
Sbjct: 56 DAPKFGTVIHNRIFVGGFSLTTTDEDLWKFFSGFSTVTAARVIYDRAGVSKCYGFVTFAS 115
Query: 94 EEEAKRLQK 102
+ A+ + K
Sbjct: 116 QRVARLIVK 124
>gi|402587839|gb|EJW81773.1| hypothetical protein WUBG_07318 [Wuchereria bancrofti]
Length = 432
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 10/90 (11%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
P+ ++P R+F TTE +L F ++G V++ K++ G SKGYGFITFD+E+
Sbjct: 44 PRTFEMIPHRIF-------TTELDLRLFFEKFGHVREAKVIRSSEGTSKGYGFITFDTED 96
Query: 96 EAK---RLQKDSDNIMFKEKRLNIAPAIKK 122
EAK ++ +++ + FK +RLN+ PAI++
Sbjct: 97 EAKTVMQISAEAEKLEFKGRRLNLGPAIRR 126
>gi|321454136|gb|EFX65320.1| putative boule protein [Daphnia pulex]
Length = 319
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Query: 29 AAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
A+V N P G ++ RVFVG I E +L LF+++G ++ VKI+ + A +K YGF
Sbjct: 19 ASVTPNTP--GRLISNRVFVGNIPPNLVERDLIMLFNRFGKIRDVKIIPEHAR-NKSYGF 75
Query: 89 ITFDSEEEAKRLQKDS---DNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTS 145
+TF SE +A+R + S D++M+ +++LN+APA+K+ + ++ LP S
Sbjct: 76 VTFFSEADARRAIQASVQNDSVMWGDRKLNVAPAVKRAN-SNNHNPLPA---------NS 125
Query: 146 NMYY 149
N YY
Sbjct: 126 NSYY 129
>gi|405968325|gb|EKC33405.1| Protein boule [Crassostrea gigas]
Length = 122
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKG 85
+ +APKYGTV+P R+FVGGI + T+E EL + F+ YG VK KI+ DRAG+SKG
Sbjct: 69 STHAPKYGTVIPNRIFVGGIAANTSEQELKQFFAAYGAVKDSKIIADRAGVSKG 122
>gi|410911088|ref|XP_003969022.1| PREDICTED: deleted in azoospermia-like [Takifugu rubripes]
Length = 216
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G V P +FVGGI E E+ ELF +YG VK+VKI+ R GI KGYGFI F + +
Sbjct: 29 GRVTPNAIFVGGIDMKVDESEMRELFGRYGSVKEVKIITYRGGICKGYGFIYFHDDTNIQ 88
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ + I FK ++L + PAI K+
Sbjct: 89 PIIE--QQISFKGRKLKLGPAIMKE 111
>gi|312068189|ref|XP_003137097.1| DAZ protein 1 [Loa loa]
gi|307767741|gb|EFO26975.1| DAZ protein 1 [Loa loa]
Length = 425
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 12/92 (13%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
P+ ++P R+F TTE +L F ++G V++ K++ G SKGYGFITFD+E+
Sbjct: 44 PRTFEMIPHRIF-------TTELDLRLFFEKFGHVREAKVIRSSEGTSKGYGFITFDTED 96
Query: 96 EAKRL-----QKDSDNIMFKEKRLNIAPAIKK 122
EAK + ++++ + FK +RLN+ PAI++
Sbjct: 97 EAKTVMQISANQEAEKLEFKGRRLNLGPAIRR 128
>gi|82468419|gb|ABB76649.1| deleted in azoospermia-like protein [Lates calcarifer]
Length = 217
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
+SN +SPS +N + P+ G + P +FVGGI E+E+ + F++YG
Sbjct: 8 TSNQTSPSLKLSNGYI---------LPE-GKLTPNALFVGGIDMKVDENEMRDFFARYGA 57
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
VK+VKI+ R GI KGYGF+ F + + + + I FK ++L + PAI K+ +
Sbjct: 58 VKEVKIITYRGGICKGYGFVYFSEDVNIQSIVE--QQISFKGRKLKLGPAIMKE---RSS 112
Query: 130 DSLPT-VTSPVPPVPTSNMYY 149
S+P+ + P P + + +Y
Sbjct: 113 RSMPSRLVGPAPWISPTQYFY 133
>gi|3265050|gb|AAC72068.1| DAZ protein [Papio anubis]
Length = 121
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G ++P VFVGGI E+ F +YG VK+VKI+ DR G+SKGYGF++F ++ + +
Sbjct: 28 GRIMPNTVFVGGIDDRMDATEIKSCFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQ 87
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ + I + K+L + PAI+KQ
Sbjct: 88 KIVE--SQIHIQGKKLKLGPAIRKQ 110
>gi|225580744|gb|ACN94469.1| Dazl [Carassius gibelio]
Length = 235
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G + P +FVGGI E+E+ E F++YG VK+VKI+ R GI KGYGF+ F + + +
Sbjct: 42 GKMTPNTLFVGGIDMKVDENEIREFFAKYGSVKEVKIITYRGGICKGYGFVYFSEDVDIQ 101
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ I FK K+L + PAI K+
Sbjct: 102 TIVDQP--ISFKGKKLKLGPAIMKE 124
>gi|225580742|gb|ACN94468.1| Dazl [Carassius gibelio]
Length = 235
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G + P +FVGGI E+E+ E F++YG VK+VKI+ R GI KGYGF+ F + + +
Sbjct: 42 GKMTPNTLFVGGIDMKVDENEIREFFAKYGSVKEVKIITYRGGICKGYGFVYFSEDVDIQ 101
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ I FK K+L + PAI K+
Sbjct: 102 TIVDQP--ISFKGKKLKLGPAIMKE 124
>gi|18858527|ref|NP_571599.1| deleted in azoospermia-like [Danio rerio]
gi|44887843|sp|Q9YGW7.1|DAZL_DANRE RecName: Full=Deleted in azoospermia-like; Short=DAZ-like protein;
Short=zDazl
gi|4519912|dbj|BAA75800.1| zDAZL [Danio rerio]
gi|49904675|gb|AAH76423.1| Dazl protein [Danio rerio]
Length = 229
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G + P +FVGGI E+E+ E F++YG VK+VKI+ R GI KGYGF+ F + + +
Sbjct: 42 GKMTPNTLFVGGIDMKVDENEIREFFAKYGSVKEVKIITYRGGICKGYGFVYFSEDVDIQ 101
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ I FK K+L + PAI K+
Sbjct: 102 TIVDQP--ISFKGKKLKLGPAIMKE 124
>gi|348522875|ref|XP_003448949.1| PREDICTED: deleted in azoospermia-like [Oreochromis niloticus]
Length = 271
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G + P +FVGGI E+E+ + F +YG VK+VKI+ R GI KGYGF+ F + +
Sbjct: 68 GKLTPNALFVGGIDMKVDENEMRDFFGRYGTVKEVKIITYRGGICKGYGFVYFSEDVNIQ 127
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPT-VTSPVPPVPTSNMYY 149
+ + I FK ++L + PAI K+ + S+P+ + P P V + +Y
Sbjct: 128 TIIE--QQISFKGRKLKLGPAIMKERVS---RSMPSRLVGPAPWVNPTQYFY 174
>gi|409194664|gb|AFV31622.1| Dazl [Acanthopagrus schlegelii]
Length = 200
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G + P +FVGGI E+E+ + F++YG VK+VKI+ R GI KGYGF+ F + +
Sbjct: 27 GKLTPNALFVGGIDMKMDENEMQDFFARYGAVKEVKIITYRGGICKGYGFVYFSEDVNIQ 86
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPT-VTSPVPPVPTSNMYY 149
+ + I FK ++L + PAI K+ + S+P+ + P P + + +Y
Sbjct: 87 SIIE--QQISFKGRKLKLGPAIMKE---RSSRSMPSRLAGPAPWMSPAQYFY 133
>gi|47229443|emb|CAF99431.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G V P +FVGGI E+E+ ELF +YG V++VKI+ R GI KGYGF+ F+ + +
Sbjct: 31 GRVTPNAIFVGGIDMKVDENEIRELFGRYGSVREVKIITYRGGICKGYGFVYFNEDTNIQ 90
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ + I F ++L + PAI K+
Sbjct: 91 PIIEQQ--ITFNGRKLKLGPAIMKE 113
>gi|3273893|gb|AAC24874.1| DAZ protein [Pan troglodytes]
Length = 121
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYG ++F ++ + +
Sbjct: 28 GKIVPNTVFVGGIDDRTDETEIGSFFGRYGSVKEVKRIRNRTGVSKGYGCVSFVNDVDVQ 87
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ I F K+L + PAI+KQ
Sbjct: 88 KIV--GSQIHFHGKKLKLGPAIRKQ 110
>gi|390352379|ref|XP_786845.2| PREDICTED: uncharacterized protein LOC581766 [Strongylocentrotus
purpuratus]
Length = 114
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKG 85
NAP+YGT++P R+FVGGI T++ EL FS +G VK+ KI+ DRAG+SKG
Sbjct: 29 NAPRYGTIIPNRIFVGGIAFNTSDAELRNFFSAFGHVKEAKIIADRAGVSKG 80
>gi|350537239|ref|NP_001233268.1| deleted in azoospermia-like [Oncorhynchus mykiss]
gi|320542661|gb|ADW41782.1| Dazl protein [Oncorhynchus mykiss]
Length = 211
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G + P +FVGGI E+E+ + F+++G VK+VKI+ R GI KGYGF+ F+ + + +
Sbjct: 27 GRMTPNTLFVGGIDMKVDENEIRDFFARFGAVKEVKIITYRGGICKGYGFVYFNEDVDIQ 86
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ I FK ++L + PAI K+
Sbjct: 87 TIV--DQQISFKGRKLKLGPAIMKE 109
>gi|449679189|ref|XP_002163170.2| PREDICTED: uncharacterized protein LOC100212467 [Hydra
magnipapillata]
Length = 346
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P R+FV G + TTED+L F YGIV + I+ D+ G+SKGYGF+TFDS+ A+ +
Sbjct: 37 IPNRIFVKGFSKETTEDDLINFFEIYGIVIEANIIRDKQGLSKGYGFVTFDSQTIAESV- 95
Query: 102 KDSDNIMFKEKRLNIAPA 119
K + FK++ + I A
Sbjct: 96 KLEGTVPFKDREVVIGHA 113
>gi|389631543|ref|XP_003713424.1| nucleic acid-binding protein [Magnaporthe oryzae 70-15]
gi|351645757|gb|EHA53617.1| nucleic acid-binding protein [Magnaporthe oryzae 70-15]
Length = 279
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P +FV + T + L E FSQYG V K+ D G+SKG+GFI F++ E A++ +
Sbjct: 72 PNGIFVRNLVFDATNEHLAEAFSQYGNVVDAKVARDARGLSKGFGFIYFETPEAAQKACE 131
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPY 155
+++N + +R+N+AP IK G D++ + PTS++Y N +PY
Sbjct: 132 EANNTFWHGRRINVAPRIKASK-PGNRDAM----NQEERTPTSSLYIGN-IPY 178
>gi|392931153|gb|AFM91092.1| boule-like protein 2, partial [Hydra vulgaris]
Length = 216
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEA 97
YGT P R+FVG + ++L F+ YG V + K+V+D+ G+SK +GF+TF + E+
Sbjct: 10 YGTHYPNRLFVGCLPPDAGAEDLGTFFANYGNVVEAKVVLDKFGVSKRFGFVTFSNAEDV 69
Query: 98 KRLQKDSDNIMFKEKRLNIAPAIKK 122
+ L D ++F+ K++N+ PA+KK
Sbjct: 70 ETLINGKD-VIFQGKKINVGPAVKK 93
>gi|449668663|ref|XP_002166922.2| PREDICTED: uncharacterized protein LOC100203225 [Hydra
magnipapillata]
Length = 231
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEA 97
YGT P R+FVG + ++L F+ YG V + K+V+D+ G+SK +GF+TF + E+
Sbjct: 10 YGTHYPNRLFVGCLPPDAGAEDLGTFFANYGNVVEAKVVLDKFGVSKRFGFVTFSNAEDV 69
Query: 98 KRLQKDSDNIMFKEKRLNIAPAIKK 122
+ L D ++F+ K++N+ PA+KK
Sbjct: 70 ETLINGKD-VIFQGKKINVGPAVKK 93
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 18/122 (14%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGY 86
+ AV +N+ + T K++FVGGI ST TEDE + F++YG VK +I+ D + S+G+
Sbjct: 119 RGAVGSNSKDFRT---KKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF 175
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
GFIT+DSEE L + I F ++ I A K+ P PP P+S
Sbjct: 176 GFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKK--------------PNPPAPSSK 221
Query: 147 MY 148
Y
Sbjct: 222 RY 223
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG+ TT + + F +YG + I+ DR G +G+GFIT+
Sbjct: 41 PGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITY 90
>gi|221130477|ref|XP_002157877.1| PREDICTED: uncharacterized protein LOC100197749 [Hydra
magnipapillata]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 25 FNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GIS 83
+ Q + P G +P RVF+GGI + TTE EL FS YG+VK V+IV DR G
Sbjct: 14 IHIQVPIGIPTPDGGLEIPNRVFLGGIPTETTELELELFFSDYGLVKDVRIVTDRVTGEC 73
Query: 84 KGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQG 124
KGYGF+TFD E+ L +I K K+L + AI++ G
Sbjct: 74 KGYGFVTFDENEDINELVV-KKSINMKGKKLRVRKAIRRNG 113
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA K+ +
Sbjct: 344 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMN 403
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL------PTVTSPVPPVPTSNMYYH-NGLPYTYH 158
M K L +A A +K+ SL P SPVP P S ++H G P +
Sbjct: 404 GKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPS-PMSGFHHHPPGGPMSGP 462
Query: 159 NGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGV 191
+ F NGQ +VP+ P QV+ + PG+
Sbjct: 463 HHPMFIGHNGQGLVPSQPMGYGYQVQFM--PGM 493
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ++ L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 148 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 207
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + +++Q
Sbjct: 208 GMLLNDKQVFVGHFVRRQ 225
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + T+DEL + F +YG + ++ D++G S+ +GF+ F S E A + +
Sbjct: 241 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMN 300
Query: 106 NIMFKEKRLNIAPAIKK 122
I E L + A KK
Sbjct: 301 GISLGEDVLYVGRAQKK 317
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
++VG + + E L +LF+Q V +++ D S GY ++ F + E+A R
Sbjct: 61 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASR 114
>gi|320166878|gb|EFW43777.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 445
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
Query: 6 PSEGSSNPSSPSST-QNNAFFNYQAAVNNNAPKYG-TVVPKRVFVGGITSTTTEDELCEL 63
PS +SNP++ S T Q A FN + NNNA + + R+FVGGI E +L E
Sbjct: 96 PSLTASNPNNTSLTAQRPAPFN---SANNNAQRAPPATLGHRIFVGGINWKGEESDLREF 152
Query: 64 FSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
F++ G V + KI+ DR G SKGYGF++F A+ + K N+++ K L+++ A++K
Sbjct: 153 FAKLGTVVECKIIADRVTGASKGYGFVSFSDAHTAEAV-KQMQNLVYMGKPLHLSDAVRK 211
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA K+ +
Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMN 389
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL------PTVTSPVPPVPTSNMYYH-NGLPYTYH 158
M K L +A A +K+ SL P SPVP P S ++H G P +
Sbjct: 390 GKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPS-PMSGFHHHPPGGPMSGP 448
Query: 159 NGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGV 191
+ F NGQ +VP+ P QV+ + PG+
Sbjct: 449 HHPMFIGHNGQGLVPSQPMGYGYQVQFM--PGM 479
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ++ L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 193
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + +++Q
Sbjct: 194 GMLLNDKQVFVGHFVRRQ 211
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + T+DEL + F +YG + ++ D++G S+ +GF+ F S E A + +
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMN 286
Query: 106 NIMFKEKRLNIAPAIKK 122
I E L + A KK
Sbjct: 287 GISLGEDVLYVGRAQKK 303
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
++VG + + E L +LF+Q V +++ D S GY ++ F + E+A R
Sbjct: 47 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASR 100
>gi|392931151|gb|AFM91091.1| boule-like protein 1, partial [Hydra vulgaris]
Length = 202
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGY 86
Q + P G +P RVF+GGI + TTE EL FS YG+VK V+IV DR G KGY
Sbjct: 7 QVPIGIPTPDGGLEIPNRVFLGGIPTETTELELELFFSDYGLVKDVRIVTDRVTGECKGY 66
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQG 124
GF+TFD E+ L +I K K+L + AI++ G
Sbjct: 67 GFVTFDENEDINELVV-KKSINMKGKKLRVRKAIRRNG 103
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA K+ +
Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMN 389
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL------PTVTSPVPPVPTSNMYYH-NGLPYTYH 158
M K L +A A +K+ SL P SPVP P S ++H G P +
Sbjct: 390 GKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPS-PMSGFHHHPPGGPMSGP 448
Query: 159 NGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGV 191
+ F NGQ +VP+ P QV+ + PG+
Sbjct: 449 HHPMFIGHNGQGLVPSQPMGYGYQVQFM--PGM 479
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ++ L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 193
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + +++Q
Sbjct: 194 GMLLNDKQVFVGHFVRRQ 211
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + T+DEL + F +YG + ++ D++G S+ +GF+ F S E A + +
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMN 286
Query: 106 NIMFKEKRLNIAPAIKK 122
I E L + A KK
Sbjct: 287 GISLGEDVLYVGRAQKK 303
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
++VG + + E L +LF+Q V +++ D S GY ++ F + E+A R
Sbjct: 47 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASR 100
>gi|156356379|ref|XP_001623902.1| predicted protein [Nematostella vectensis]
gi|156210643|gb|EDO31802.1| predicted protein [Nematostella vectensis]
Length = 65
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+ KR+FV G TTE EL F +YG+VK+ KIV D+ G+SKGY FITF+S+E A L+
Sbjct: 6 ISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVADGLR 65
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 18/122 (14%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGY 86
+ A +N+ + T K++FVGGI ST TEDE + F++YG VK +I+ D + S+G+
Sbjct: 121 RGAAGSNSKDFRT---KKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGF 177
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
GFIT+DSEE L + I F ++ I A K+ P PP P+S
Sbjct: 178 GFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKK--------------PNPPAPSSK 223
Query: 147 MY 148
Y
Sbjct: 224 RY 225
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG+ TT + + F +YG + I+ DR G +G+GFIT+
Sbjct: 43 PGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITY 92
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 55 TTEDELCELFSQYGIVKQVKIVVDRAGISKG-YGFITFDSEEEAKRLQK-DSDNIMFKEK 112
TTE+EL F+ +G +K VK++ D++G+SKG Y F+TF+ +E A+ + K +++ ++FK++
Sbjct: 389 TTEEELRNFFAVFGTIKDVKVIYDKSGLSKGSYAFVTFEDQETAEAIIKNEAETLVFKDR 448
Query: 113 RLNIAPAIKKQ 123
+LNI A++KQ
Sbjct: 449 KLNIGYAVRKQ 459
>gi|281200887|gb|EFA75101.1| hypothetical protein PPL_11175 [Polysphondylium pallidum PN500]
Length = 326
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAKRLQ 101
P ++FVGGI+ E L + FS +G V + KI++DR + SKGYGFITF+ EE ++
Sbjct: 29 PNKLFVGGISWRADEAGLAKFFSTFGNVLECKIIMDRNTLKSKGYGFITFEDEESVSKV- 87
Query: 102 KDSDNIMFKEKRLNIAPAIKK-QGF 125
K++ + F K +N+ A++K GF
Sbjct: 88 KNASTLSFMGKNMNVGDAMRKSDGF 112
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ ++FVGG++ TTE L E FSQYG V + KIV+DR + SKG+GF+TF SEEEA++
Sbjct: 32 IASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKA 91
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
+ + D + + + A + F G +P PP PT++
Sbjct: 92 RTEMDGKELNGRTIFVDYAKPRADFGG---GMPIARG--PPEPTAD 132
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + S EEA R + +
Sbjct: 343 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMN 402
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL------PTVTSPVP-PVPTSNMYYHNGLPYTYH 158
M K L +A A +K+ +L P SP+P P+P + + G H
Sbjct: 403 GKMIGRKPLYVAFAQRKEERRAHLQTLFTHIRSPGTMSPIPSPMPGFHHHPPGGPMSGPH 462
Query: 159 NGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGV 191
+ + NGQ +VP P QV+ + PGV
Sbjct: 463 HPTMYIGQNGQGLVPPQPMGYGYQVQFM--PGV 493
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 147 VFIKNLDPSIDNKALYETFSAFGTILSCKVAMDAVGRSKGYGFVQFEKEETAQAAIDKLN 206
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + +++Q
Sbjct: 207 GMLLNDKQVFVGHFVRRQ 224
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + T+DEL + F +YG + ++ D++G S+ +GF+ F+S E A + +
Sbjct: 240 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPEAAAVAVEKMN 299
Query: 106 NIMFKEKRLNIAPAIKK 122
I E L + A KK
Sbjct: 300 GISLGEDVLYVGRAQKK 316
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
++VG + + E +L +LF+Q V+ V++ D S GY ++ F + E+A R
Sbjct: 60 LYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPEDASR 113
>gi|157278335|ref|NP_001098269.1| Daz-like protein [Oryzias latipes]
gi|62721141|gb|AAX94053.1| Daz-like protein [Oryzias latipes]
Length = 217
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 36/189 (19%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G + P +FVGGI E+E+ E F++YG V++VKI+ R G+ KGYGF+ F+ E+
Sbjct: 27 GKLTPNSLFVGGIDMKVDENEIKEFFARYGSVREVKIIRYRGGLCKGYGFVYFN--EDVD 84
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ--------GFTGTYDSL-PT--------------V 135
I+F ++L + PAI K+ GF G + PT V
Sbjct: 85 IQSIIEQQIIFMGRKLKLGPAILKEKRPRSIPPGFVGNGAWMNPTQYFYCACCPPLGGGV 144
Query: 136 TSPVPPVPTSNMYYHNGLPYTYHN--GMAF------FPSNGQSMVPTSPPTVPTQVKILL 187
T P P V Y PY+Y N G+ +P N + ++P P Q L
Sbjct: 145 TQPSPIVSGGTPYNQ---PYSYSNFGGIVIPQMPVSYPQNAYTYQYSTPAWTPDQRTHPL 201
Query: 188 PPGVLLCGI 196
+ CG+
Sbjct: 202 HQSFVDCGV 210
>gi|392931155|gb|AFM91093.1| boule-like protein 3, partial [Hydra vulgaris]
Length = 283
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P R+FV G + TTE +L F YGIV + I+ D+ G+SKGYGF+TFDS+ A+ +
Sbjct: 34 IPNRIFVKGFSKETTEGDLINFFEIYGIVIEANIIRDKQGLSKGYGFVTFDSQTIAESV- 92
Query: 102 KDSDNIMFKEKRLNIAPA 119
K + FK + + I A
Sbjct: 93 KLEGTVPFKGREVVIGHA 110
>gi|363807504|ref|NP_001242397.1| uncharacterized protein LOC100813699 [Glycine max]
gi|255641601|gb|ACU21073.1| unknown [Glycine max]
Length = 269
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
NNN ++G +VFVGG+ T +D L + F +YG + + I+ D+ G SKGYGF+T
Sbjct: 8 NNNVGEFGDTTLTKVFVGGLAWETPKDALKDHFEKYGQILEAVIISDKHTGKSKGYGFVT 67
Query: 91 FDSEEEAKRLQKDSDNIMFKEKRLN 115
F E AK+ ++S ++ +R N
Sbjct: 68 FKEAEAAKKACENSTTLIINGRRAN 92
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI S TEDE + F++YG VK +I+ D + S+G+GFITFDSE+ L
Sbjct: 133 KKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLS 192
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+ I F ++ I A K+ P PP P+S Y
Sbjct: 193 MGNKIDFAGTQVEIKKAEPKK--------------PNPPTPSSKRY 224
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITF 91
P ++F+GG+ TT + + F +YG + I+ DR +G+GFIT+
Sbjct: 44 PGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITY 93
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FVGGI+ TTE +L F QYG +K+V+++ DR G +GYGFI F+++ + K K++D
Sbjct: 100 LFVGGISYDTTEKKLKREFEQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMKEAYKNAD 159
Query: 106 NIMFKEKRL 114
+R+
Sbjct: 160 GKKIDGRRV 168
>gi|328866898|gb|EGG15281.1| hypothetical protein DFA_10115 [Dictyostelium fasciculatum]
Length = 407
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
+VFVGGI+ E L + F YG V KI++D+ SKGYGF+TF EE A ++++
Sbjct: 35 KVFVGGISWKADESGLAKYFGTYGQVVDCKIIMDKNTQKSKGYGFVTFTDEESALKVKR- 93
Query: 104 SDNIMFKEKRLNIAPAIKK 122
S N+ + K +N+ A++K
Sbjct: 94 STNLYYMGKVMNVGDAMRK 112
>gi|328876236|gb|EGG24599.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 497
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKDS 104
VFVGGI TTE+EL +LFS G VKQV+I+ DR+ G +KGYGF++F ++ K
Sbjct: 114 VFVGGIARNTTEEELQDLFSTIGNVKQVRIMKDRSNGENKGYGFVSFANKSNCKEAVVQF 173
Query: 105 DNIMFKEKRLNI 116
+N FK K L +
Sbjct: 174 NNKEFKGKNLRV 185
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+ ++FVGG++ TTE+ L E FSQYG V + KIV+DRA SKG+GF+T+ SE+EA++
Sbjct: 37 ITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKA 96
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
+ + + + + A K F G +P PP PT++
Sbjct: 97 LDEMNGKALNGRVIYVDYAKLKTNFGG---GIPIARG--PPEPTTS 137
>gi|194380304|dbj|BAG63919.1| unnamed protein product [Homo sapiens]
Length = 581
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 57 EDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNI 116
E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +++ I F K+L +
Sbjct: 4 ETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKI--VGSQIHFHGKKLKL 61
Query: 117 APAIKKQ 123
PAI+KQ
Sbjct: 62 GPAIRKQ 68
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI S TEDE + F++YG VK +I+ D + S+G+GFITFDSEE L
Sbjct: 2064 KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLS 2123
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ I F ++ I A K+
Sbjct: 2124 MGNKIDFAGSQVEIKKAEPKK 2144
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 12 NPSSPSSTQNNA-------FFNYQAAVNNNAPKYGTVVPKRV-------FVGGITSTTTE 57
+ S+PSS N++ F +Y + P Y +R+ F+GG+ TT
Sbjct: 1930 DRSTPSSVVNDSSPRTPQPFVDYVRKTIDETPYYKREGRRRINPQNTKIFIGGLARETTI 1989
Query: 58 DELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
+ + F +YG + I+ DR G +G+GFIT+ ++ +D
Sbjct: 1990 AQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIED 2036
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + + +D+LCELFS YG + KI+ D G+SKG
Sbjct: 307 FEQSMKDAADKYQGL---NLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGS 363
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF+ F + EEA + + + M K L +A A +K+ + + PVP P+
Sbjct: 364 GFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQVRPVPMTPS 421
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D G SKG+GF+ +D E A+ K +
Sbjct: 129 IFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLN 188
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ + D
Sbjct: 189 GMLINDKPVYVGPFLRKQERENSVD 213
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++F YG + I+V G S+ +GFI F S ++A R ++ +
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 280 GKKINDKEWYVGRAQKK 296
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + ++ T+ +L ELFSQ G V V++ D + S GY ++ F++ +A R
Sbjct: 41 LYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAAR 95
>gi|51535080|dbj|BAD37669.1| putative RRM-containing protein [Oryza sativa Japonica Group]
gi|51535381|dbj|BAD37252.1| putative RRM-containing protein [Oryza sativa Japonica Group]
gi|125596523|gb|EAZ36303.1| hypothetical protein OsJ_20624 [Oryza sativa Japonica Group]
gi|215765073|dbj|BAG86770.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 343
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T + L F QYG + + ++ DR G SKGYGF+TF E
Sbjct: 32 RFGDTTLTKVFVGGLAWETPSEGLRRHFEQYGEILEAVVIADRLTGRSKGYGFVTFREAE 91
Query: 96 EAKRLQKDSDNIMFKEKRLN 115
A+R +D N M +R N
Sbjct: 92 AARRAVQD-PNPMIAGRRAN 110
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 7 SEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQ 66
+EG + P + T + N +AA + G R+FV + TT+E+EL LF Q
Sbjct: 194 TEGGAKPQQQADTGDRPG-NEEAAQDVAETDTG-----RLFVRNLAYTTSEEELASLFGQ 247
Query: 67 YGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPA 119
YG V QV ++ D+ SKGYG++ F EEA R + DN +F+ + L++ PA
Sbjct: 248 YGEVVQVHLICDKETNRSKGYGYVGFTLPEEATRAMTELDNSIFQGRLLHVLPA 301
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
RV V + + T+D+L E F G V K++ R G S+ +GF+ F S+EEA+
Sbjct: 6 RVCVKNLPTYVTDDKLREHFGAKGQVTDAKVMRTRDGKSRRFGFVGFYSQEEAE 59
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 7 SEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQ 66
+EG + P + T + N +AA + G R+FV + TT+E+EL LF Q
Sbjct: 194 TEGEAKPQQQADTGDRPG-NEEAAQDVAETDTG-----RLFVRNLAYTTSEEELVSLFGQ 247
Query: 67 YGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPA 119
YG V QV ++ D+ SKGYG++ F EEA R + DN +F+ + L++ PA
Sbjct: 248 YGEVVQVHVICDKETNRSKGYGYVGFMLPEEATRAMTELDNSIFQGRLLHVLPA 301
Score = 40.0 bits (92), Expect = 0.94, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
RV V + + T+D+L E F G V K++ R G S+ +GF+ F S+EEA+
Sbjct: 6 RVCVKNLPAYVTDDKLKEHFGAKGQVTDAKVMRTREGKSRRFGFVGFYSQEEAE 59
>gi|3273895|gb|AAC24875.1| DAZ protein [Pan troglodytes]
Length = 101
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
G +VP VFVGGI T E E+ F +YG VK+VK + +R G+SKGYGF++F ++ + +
Sbjct: 28 GKIVPNTVFVGGIDDRTDETEIRSFFGRYGSVKEVKRIRNRTGVSKGYGFVSFVNDVDVQ 87
Query: 99 RLQKDSDNIMFKEKRL 114
++ I F K+L
Sbjct: 88 KIV--GSQIHFHGKKL 101
>gi|66819435|ref|XP_643377.1| hypothetical protein DDB_G0275971 [Dictyostelium discoideum AX4]
gi|60471485|gb|EAL69442.1| hypothetical protein DDB_G0275971 [Dictyostelium discoideum AX4]
Length = 699
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ E+ L F Q+G V + KI++D SKGYGFITF++E+ ++++
Sbjct: 104 KIFVGGISWKADENTLKTYFLQFGNVLECKIIMDYNTNKSKGYGFITFENEDSIEKVR-- 161
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ N++F K +NI ++K
Sbjct: 162 TSNLLFMGKNMNIGDPVRKH 181
>gi|224109676|ref|XP_002315274.1| predicted protein [Populus trichocarpa]
gi|118481097|gb|ABK92502.1| unknown [Populus trichocarpa]
gi|222864314|gb|EEF01445.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
NN A ++G +VFVGG+ T +D + E F +YG + + I+ D+ G SKGYGF+T
Sbjct: 5 NNIAGQFGDTTLTKVFVGGLAWETPKDAMREHFEKYGEILEAVIISDKITGRSKGYGFVT 64
Query: 91 FDSEEEAKRLQKDSDNIMFKEKRLN 115
F E AK+ +D+ I+ +R N
Sbjct: 65 FKEAESAKKACEDASPII-NGRRAN 88
>gi|330795211|ref|XP_003285668.1| hypothetical protein DICPUDRAFT_97109 [Dictyostelium purpureum]
gi|325084394|gb|EGC37823.1| hypothetical protein DICPUDRAFT_97109 [Dictyostelium purpureum]
Length = 227
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ E +L FS YG V + KI++D SKGYGFITF++E ++++
Sbjct: 112 KIFVGGISWRANETQLKNYFSSYGTVLECKIIMDYNTNKSKGYGFITFENESSIEKVK-- 169
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ N++F K +NI ++K
Sbjct: 170 NSNLLFMGKTMNIGDPVRKN 189
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI +T TEDE + FS++G V + +I+ DR+ G S+G+GFITFDSE+ + +
Sbjct: 133 KKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIIS 192
Query: 103 DSDNIMFKEKRLNIAPA 119
I K++ I A
Sbjct: 193 QGKMIELGGKQVEIKKA 209
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG++ +TT + FS+YG + I+ DR G +G+GF+T+
Sbjct: 45 PGKIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTY 94
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
G V +++FVGGI T TEDEL E FS YG + + +I++D + G S+G+GF+TF++E+
Sbjct: 163 GVVRARKIFVGGIPPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSV 222
Query: 98 KRLQKDSDNIMFKEKRLNIAPAIKKQ 123
+++ KR+ I A+ K+
Sbjct: 223 EQIFSTGRTHELGGKRVEIKKAVPKR 248
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ TTE+ FS++G + I+ DR +G +G+GF+TF A R+ ++
Sbjct: 80 KLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEE 139
Query: 104 SDNIM 108
D+I+
Sbjct: 140 -DHII 143
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV GI+ TTE +L F QYG +K+V+++ DR G +GYGFI F+++ + K K++D
Sbjct: 100 LFVAGISYDTTEKKLKREFDQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMKEAYKNAD 159
Query: 106 NIMFKEKRL 114
+R+
Sbjct: 160 GKKIDGRRV 168
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ ++F+GG++ TED L E F++YG V + IV D+ SKG+GF+ F SEEEA +
Sbjct: 34 ITHKLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKA 93
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
+ + + + + + + A KQ D LP + P P+ S+
Sbjct: 94 RDEMNGKVLNGRVIYVDIAKAKQ--DRATDVLPIASGPPKPIGNSS 137
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + + +D+LCELFS YG + KI+ D G+SKG
Sbjct: 307 FEQSMKDAADKYQGL---NLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGS 363
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF+ F + EEA + + + M K L +A A +K+ + + PVP P+
Sbjct: 364 GFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKVMLQAQFSQVRPVPMTPS 421
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D G SKG+GF+ +D E A+ K +
Sbjct: 129 IFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLN 188
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ + D
Sbjct: 189 GMLINDKPVYVGPFLRKQERENSVD 213
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++F YG + I+V G S+ +GFI F S ++A R ++ +
Sbjct: 220 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 279
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 280 GKKINDKEWYVGRAQKK 296
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + ++ T+ +L ELFSQ G V V++ D + S GY ++ F++ +A R
Sbjct: 41 LYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAAR 95
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+F+GG++ TED L E FSQYG V + IV D+ KG+GF+ F SEE A + +++
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPP 141
+ + + + + I K T DS P T P P
Sbjct: 98 MNGKVLNGRVIYV--DIAKAKMNRTTDSSPRATGPPKP 133
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+FVG + + T+ L E F + Y VK K+V+DRA G +KGYGF+ F E E R +
Sbjct: 159 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRAMTE 218
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVP 140
+ + + + I PA K+G TG DS + VP
Sbjct: 219 MNGVPCSTRPMRIGPAASKKGVTGQRDSYQSAAGGVP 255
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE---EEAKRL 100
VFVGG+ + T+D L +F QYG + VKI K GF+ F + EEA R+
Sbjct: 265 VFVGGLDQSVTDDHLKNVFGQYGEIVHVKIPA-----GKRCGFVQFSEKSCAEEALRM 317
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAKRLQ 101
++FV G+ +TTED+L E FSQYG V + IV++RA SKG+G++TF EE+A++ Q
Sbjct: 70 KIFVKGLAFSTTEDKLAEAFSQYGKVLKADIVLNRAKTRSKGFGYVTFAKEEDAQKAQ 127
>gi|256082234|ref|XP_002577364.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 263
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
KRVF+GG+ + TT +EL E FSQ+G ++ ++++D++ +G+GF+TF+SEE A+++ +
Sbjct: 62 KRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCE 121
Query: 103 ----DSDNIMFKEKR 113
D N M + K+
Sbjct: 122 IHFHDLHNKMVEAKK 136
>gi|171451952|dbj|BAG15904.1| musashi [Dugesia japonica]
Length = 463
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
K+VF+GGI++ TT+ EL E FSQ+GI++ ++++D+A +G+GF+TF++E+ A+++
Sbjct: 143 KKVFIGGISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDTAEKV 200
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N + NN+P P ++F+GG++ TT+ + + + F +YG +K+ I+ D S+
Sbjct: 12 NSEYETENNSPTCND--PGKMFIGGLSPTTSPETMRDYFRKYGDIKEFMIMRDPVTKRSR 69
Query: 85 GYGFITFDSEEEAKRLQKDSDNIMFKEK 112
G+GF+TF K++ + +I+ +K
Sbjct: 70 GFGFVTFFESSSVKKVLNKTPHILDSKK 97
>gi|17538232|ref|NP_502136.1| Protein B0035.12 [Caenorhabditis elegans]
gi|3873696|emb|CAA97405.1| Protein B0035.12 [Caenorhabditis elegans]
Length = 836
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
K+ T + K +VFV + T+DEL LFS++G V V+ V + G KG F+ FD+E
Sbjct: 675 KFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEA 734
Query: 96 EAKRLQKDSDNIMFKEKRLNIA---PAIKK 122
A++ D +M +E+ L +A P +KK
Sbjct: 735 SAQKCVASGDKLMLRERELEVALSNPPVKK 764
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQ 101
P+++FVGG+ S+ TEDEL E FS YG + + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 260 PRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 319
Query: 102 KDSDNIMFKEKRLNIAPAI-KKQG 124
+ K++ I A KK G
Sbjct: 320 SEGRMRDLGGKQVEIKKAEPKKHG 343
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF
Sbjct: 176 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 223
>gi|326503278|dbj|BAJ99264.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T + L + F QYG + + ++ DR G SKGYGF+TF E
Sbjct: 15 RFGDTTQTKVFVGGLAWETPSEGLRQHFEQYGDILEAVVITDRLTGRSKGYGFVTFREAE 74
Query: 96 EAKRLQKDSD-NIMFKEKRLNIA 117
A+R +D + I + NIA
Sbjct: 75 AARRAVEDPNPTITGRRANCNIA 97
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI S TEDE + F++YG VK +I+ D + S+G+GFITF+SEE L
Sbjct: 130 KKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLS 189
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ I F ++ I A K+
Sbjct: 190 MGNKIDFAGAQVEIKKAEPKK 210
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 25 FNYQAAVNNNAPKYGT-VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGI 82
F+++ +N+ P G P ++F+GG+ TT + + F +YG + I+ DR G
Sbjct: 22 FSHREEPHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQ 81
Query: 83 SKGYGFITF 91
+G+GFIT+
Sbjct: 82 PRGFGFITY 90
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 12 NPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVK 71
+PS P + + F YQ+ T+ K++F+ G+ +TT+++L LF ++GI+K
Sbjct: 674 SPSEPDAALKHPAFKYQS----------TLEKKKLFIKGLALSTTKEDLEALFKKFGILK 723
Query: 72 QVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIA 117
V++V R G KG ++ F+ E A +D F++K L +A
Sbjct: 724 DVRLVTFRNGSPKGLAYVEFEDEVSATMALNQTDGTTFQDKVLTVA 769
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + T+E ++ + S G + +++V+D KG+ F+ F S++EA+ + K D
Sbjct: 604 VFLSNLAYETSEQDVRNMMSSSGTITDIRLVLDYKQRCKGFCFVEFSSQDEARAVLK-RD 662
Query: 106 NIMFKEKRLNIAPA 119
+ K + + ++P+
Sbjct: 663 RELMKGRPVFMSPS 676
>gi|357124772|ref|XP_003564071.1| PREDICTED: uncharacterized protein LOC100841108 [Brachypodium
distachyon]
Length = 291
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T + L + F QYG + + ++ DR G SKGYGF+TF E
Sbjct: 16 RFGDTTLTKVFVGGLAWETPSEGLRQHFEQYGDILEAVVITDRLTGRSKGYGFVTFREPE 75
Query: 96 EAKRLQKDSD-NIMFKEKRLNIA 117
A+R +D + I + NIA
Sbjct: 76 AARRAVQDPNPTITGRRANCNIA 98
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V TT++ L E+FSQYG + VKI+ D +G SKG+GFI F+ +AKR ++ +
Sbjct: 201 VYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEEVN 260
Query: 106 NIMFKEKRLNIAPAIKKQ 123
F +++ ++ A KK+
Sbjct: 261 GKQFGGRKIYVSRAQKKK 278
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + +T ++ L ++F+ +G V K++V + G KG+GF++F S EEAK+ ++
Sbjct: 304 LFVKNLAESTDDEHLRKIFAPFGTVTSAKVIV-KGGRRKGFGFVSFSSREEAKKAVEEMH 362
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M + L ++ A KQ
Sbjct: 363 GKMLSARPLYVSYARYKQ 380
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + ++ EL +LF+ +G + K+V D G KG+GF+ F++ E A + K+ +
Sbjct: 109 VFVNHLDASIDNKELYDLFAGFGTILSCKVVSDENG-PKGHGFVHFETREAADKAIKEMN 167
Query: 106 NIMFKEKRLNI 116
+ KE+++ +
Sbjct: 168 GSLVKERKVFV 178
>gi|226478812|emb|CAX72901.1| RNA-binding protein Musashi homolog 2 [Schistosoma japonicum]
Length = 345
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
KRVF+GG+ + TT +EL E FSQ+G ++ ++++D++ +G+GF+TF+SEE A+++ +
Sbjct: 169 KRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCE 228
Query: 103 ----DSDNIMFKEKR 113
D N M + K+
Sbjct: 229 IHFHDLHNKMVEAKK 243
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITF 91
P ++F+GG++ TTT + L + F +YG +++ I+ D S+G+GF+TF
Sbjct: 77 PGKMFIGGLSPTTTSEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTF 126
>gi|119570794|gb|EAW50409.1| hCG1733452 [Homo sapiens]
Length = 164
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 57 EDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNI 116
E E+ F +YG VK+VKI+ +R G+SKGYGF++F ++ + +++ I F K+L +
Sbjct: 3 ETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKI--VGSQIHFHGKKLKL 60
Query: 117 APAIKKQ 123
PAI+KQ
Sbjct: 61 GPAIRKQ 67
>gi|353230165|emb|CCD76336.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 346
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
KRVF+GG+ + TT +EL E FSQ+G ++ ++++D++ +G+GF+TF+SEE A+++ +
Sbjct: 169 KRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCE 228
Query: 103 ----DSDNIMFKEKR 113
D N M + K+
Sbjct: 229 IHFHDLHNKMVEAKK 243
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITF 91
P ++F+GG++ TTT + L + F +YG +++ I+ D S+G+GFITF
Sbjct: 77 PGKMFIGGLSPTTTSEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFITF 126
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 25/155 (16%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V I T+ EL +LFS G + VK++ D GISKG+GF+ F + EEA + + +
Sbjct: 296 LYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRSFN 355
Query: 106 NIMFKEKRLNIAPAIKKQ---------------GFTGTYDSLPTVTSPVPPVPTSNMYYH 150
MF K L IA A +K G G+ S P + PP +YH
Sbjct: 356 GCMFHRKPLYIAIAQRKMDRKTQLNLHYAPQQTGLDGS--STPVIPGGFPP-----YFYH 408
Query: 151 NGLPYTYHNGMAFFP---SNGQSMVPTSPPTVPTQ 182
+ + +G+ + P +G + PPT Q
Sbjct: 409 SVASQMFQSGLLYQPLGLRSGWRANDSVPPTRSFQ 443
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + + L +LF +YG + K+V+ G SKGYGF+ F+SEE A + +
Sbjct: 102 VFVKNLAGSIDNAGLHDLFQKYGNILSSKVVMSGDGKSKGYGFVQFESEESANNAIEKLN 161
Query: 106 NIMFKEKRLNIAPAIKKQ-----GFTGTYDSL 132
+K++ + ++K G+ Y +L
Sbjct: 162 GSTVGDKQIYVGKFVRKGDRILPGYDAKYTNL 193
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + S TE L E FS +G + + I D G+SKG+ F+ +++ ++A++ + +
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYENPDDARKAMEAMN 252
Query: 106 NIMFKEKRLNIAPAIKK 122
+ F K L +A A KK
Sbjct: 253 GLKFGSKNLYVARAQKK 269
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAK 98
VP ++VG + S + L E F+++ + V++ DR + S YG++ F S+++A
Sbjct: 8 AAVPASLYVGDLHSEVVDHHLFEAFAEFKTMDSVRVCRDRVTMKSLCYGYVNFKSQQDAI 67
Query: 99 RLQKDSDNIMFKEKRLNIA-----PAIKKQG 124
R K +N K + + P+ +K G
Sbjct: 68 RAMKLKNNSYLNGKVIRVMWSHPDPSARKSG 98
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
+Y + +++ + T E+ L ELFS++G + K+++D+ G+SKG GF+ F + EE
Sbjct: 308 RYEKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEE 367
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP-VPPVPTSNMYYHNGLP 154
A R + + M +K L +A A +++ + + +P +P +P+ YH G P
Sbjct: 368 ASRALSEMNGKMIGKKPLYVAIAQRREERMARLQAHFSQIQAPGLPTLPSGLPGYHPGTP 427
Query: 155 YTYHNGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGV 191
+ + +F M+P P Q ++L PG+
Sbjct: 428 RLAPHQL-YFGQGTPGMMPPQPAGYSFQPQLL--PGM 461
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L E F+ +G V K+ VD G SKGYGFI F++EE+A+ +
Sbjct: 123 VFIKNLDTKIDNKALYETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLN 182
Query: 106 NIMFKEKRLNIAPAIKK 122
++ ++ + + P +++
Sbjct: 183 GMLVNDREVYVGPFVRR 199
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
N +PK+ V+V ++ TT++++L ++FS YG + ++ D+ G S+G+GF+ F
Sbjct: 206 NGSPKF-----TNVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQ 260
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
S + A + + + F +K + A +K
Sbjct: 261 SPDSAAAAVEKLNGMTFSDKVWYVGRAQRK 290
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAKR 99
+ ++VG + E +L +LFSQ V ++ D+AG+ S GY ++ F + ++A +
Sbjct: 33 RSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAK 89
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
KR+FVGG++S +TE +L E F ++G ++ V+++ DR +G+GF+TFDSE+ A+++
Sbjct: 150 KRIFVGGLSSDSTEMDLQEYFQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEKPAEKV 207
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 29 AAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYG 87
A + P T P ++FVGG++ T+ ++L E F+++G V + I+ D S+G+G
Sbjct: 35 GATSPTTPNGDTSKPTKIFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFG 94
Query: 88 FITF-DSEEEAKRLQKDSDN-IMFKEKRLNIAPAI 120
FITF D +K L+ + I+ +K NI P I
Sbjct: 95 FITFKDPASVSKVLETHAQEPIVLDDK--NIDPKI 127
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ K+++VG ++ T ED L LFSQYG V+ VKI+ DR G SKG+GF+ +EEEA+
Sbjct: 1 MAKKLYVGNLSYNTYEDNLRTLFSQYGTVESVKIITDRDTGNSKGFGFVEMSTEEEAQAA 60
Query: 101 QKDSDNIMFKEKRLNIAPAIKK 122
+ +++ + + + A+ K
Sbjct: 61 IRGTNSTDLDGRSIKVNEAMDK 82
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGGI ST TEDEL + F++YG V + +++ D S+G+GF+ FDSEE L
Sbjct: 109 KKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLS 168
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ I + ++ I A K+
Sbjct: 169 KGNMIDMADTQVEIKKAEPKK 189
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
N+N P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT
Sbjct: 7 NDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFIT 66
Query: 91 FDSEEEAKRLQKDSDNIMFKE 111
F ++ +D+ I K+
Sbjct: 67 FADPSVVDKVIEDTHVINGKQ 87
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
++ ++FVGG++ T E L E FSQYG V + ++++DR G S+G+GFI+F S EEA
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEAT 95
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKKQ 123
+ D +R+ + A +K+
Sbjct: 96 SAMQAMDGQDLHGRRIKVNYATEKR 120
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF-DSEEEA 97
++ ++FVGG++ T E L E FSQYG V + ++++DR G S+G+GFI+F SEE A
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAA 95
Query: 98 KRLQK-DSDNIMFKEKRLNIAPAIKK 122
LQ D ++ + R+N A ++
Sbjct: 96 SALQAMDGQDLHGRRIRVNYATEKRR 121
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + T+++L ELFS++G V KI+ D GIS+G GF+ F + EEA R + +
Sbjct: 308 LYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMN 367
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPV 142
M K L +APA KK+ LP S V PV
Sbjct: 368 GKMVAGKPLYVAPAQKKEERKA---RLPAQFSQVRPV 401
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + KI +D +G+SKGYGF+ F++EE A+ +
Sbjct: 114 IFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLN 173
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K + + +KQ
Sbjct: 174 GMLLNDKPVYVGHFQRKQ 191
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ + T+D+L F +YG + ++ D G SK +GF+ F++ + A + +
Sbjct: 205 VYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKSKCFGFVNFENADAAAEAVEALN 264
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A+KK
Sbjct: 265 GKKFDDKEWYVGKALKK 281
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 31 VNNN---APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGY 86
VNN+ AP + ++VG + T+ +L +LF+Q G V V+I D A S GY
Sbjct: 8 VNNDVAAAPVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGY 67
Query: 87 GFITFDSEEEAKR 99
G++ F + +A +
Sbjct: 68 GYVNFSNPHDAAK 80
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK- 102
++FVGGI+ T E L + FS+YG V +I++DR +G SKG+GF+T+++ EEA +
Sbjct: 45 KLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQA 104
Query: 103 -DSDNIMFKEKRLNIAPAIKKQGF 125
D ++ + +N A + GF
Sbjct: 105 LDGQDLYGRRVGVNFANERPRDGF 128
>gi|293332557|ref|NP_001169821.1| uncharacterized protein LOC100383713 [Zea mays]
gi|224031839|gb|ACN34995.1| unknown [Zea mays]
gi|413944112|gb|AFW76761.1| RNA-binding region-containing protein 1 [Zea mays]
Length = 332
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T + L + F +YG + + ++ DR G SKGYGF+TF E
Sbjct: 23 RFGDTTLTKVFVGGLAWETPSEGLRQHFERYGDILEAVVITDRLTGRSKGYGFVTFREPE 82
Query: 96 EAKRLQKDSD-NIMFKEKRLNIA 117
A+R +D + I + NIA
Sbjct: 83 AARRAVQDPNPTIAGRRANCNIA 105
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI S+ TED+L E FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 188 KKIFVGGIPSSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 247
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 248 EGRMHDLGGKQVEIKKA 264
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
+A G ++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF
Sbjct: 89 DADSGGGDSSGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTF 147
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++FVGG+ ST TED+L + FS YG V + +I+VD + G S+G+GF+TF+SE+ +R+
Sbjct: 151 RKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERV 208
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF ++ +D
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 104 SDNI 107
NI
Sbjct: 123 EHNI 126
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++FVGG+ ST TED+L + FS YG V + +I+VD + G S+G+GF+TF+SE+ +R+
Sbjct: 151 RKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERV 208
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF ++ +D
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 104 SDNI 107
NI
Sbjct: 123 EHNI 126
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR-LQK 102
++FVGGI+ +T E L E FS+YG V KI+VDR G S+G+ F+TF S EEA +Q
Sbjct: 35 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 94
Query: 103 DSDNIMFKEKRLNIAP 118
D ++ + R+N A
Sbjct: 95 DGQDLHGRRIRVNYAT 110
>gi|356520186|ref|XP_003528745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Glycine max]
Length = 267
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T +D L + F +YG + + I+ D+ SKGYGF+TF E
Sbjct: 17 EFGDTTLTKVFVGGLAWETPKDALKDHFEKYGEILEAVIISDKHTAKSKGYGFVTFKEAE 76
Query: 96 EAKRLQKDSDNIMFKEKRLN 115
AK+ +DS ++ +R N
Sbjct: 77 AAKKACEDSATLVINGRRAN 96
>gi|256073766|ref|XP_002573199.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 431
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR 99
V K+VF+GG+++ TT DEL FS++G V+ ++++D+A +G+GF+TF+SE+ A++
Sbjct: 118 VRTKKVFIGGVSTGTTADELKTFFSEFGKVETCELMMDKATSRHRGFGFVTFESEQAAEK 177
Query: 100 L 100
+
Sbjct: 178 V 178
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + T+++L ELFS++G V KI+ D GIS+G GF+ F + EEA R + +
Sbjct: 308 LYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMN 367
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +APA KK+
Sbjct: 368 GKMVAGKPLYVAPAQKKE 385
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + KI +D +G+SKGYGF+ F++EE A+ +
Sbjct: 114 IFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLN 173
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K + + +KQ
Sbjct: 174 GMLLNDKPVYVGHFQRKQ 191
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ + T+D+L F +YG + ++ D G SK +GF+ F++ + A + +
Sbjct: 205 VYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKSKCFGFVNFENADAAAEAVEALN 264
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A+KK
Sbjct: 265 GKKFDDKEWYVGKALKK 281
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 31 VNNN---APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGY 86
VNN+ AP + ++VG + T+ +L +LF+Q G V V+I D A S GY
Sbjct: 8 VNNDVAAAPVPNQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGY 67
Query: 87 GFITFDSEEEAKR 99
G++ F + +A +
Sbjct: 68 GYVNFSNPHDAAK 80
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR-LQK 102
++FVGGI+ +T E L E FS+YG V KI+VDR G S+G+ F+TF S EEA +Q
Sbjct: 35 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 94
Query: 103 DSDNIMFKEKRLNIA 117
D ++ + R+N A
Sbjct: 95 DGQDLHGRRIRVNYA 109
>gi|353231613|emb|CCD78031.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 438
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR 99
V K+VF+GG+++ TT DEL FS++G V+ ++++D+A +G+GF+TF+SE+ A++
Sbjct: 118 VRTKKVFIGGVSTGTTADELKTFFSEFGKVETCELMMDKATSRHRGFGFVTFESEQAAEK 177
Query: 100 L 100
+
Sbjct: 178 V 178
>gi|226501312|ref|NP_001146912.1| RNA-binding region-containing protein 1 [Zea mays]
gi|195605124|gb|ACG24392.1| RNA-binding region-containing protein 1 [Zea mays]
Length = 339
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T + L + F +YG + + ++ DR G SKGYGF+TF E
Sbjct: 23 RFGDTTLTKVFVGGLAWETPSEGLRQHFERYGDILEAVVITDRLTGRSKGYGFVTFREPE 82
Query: 96 EAKRLQKDSD-NIMFKEKRLNIA 117
A+R +D + I + NIA
Sbjct: 83 AARRAVQDPNPTIAGRRANCNIA 105
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGG+ S+ TEDEL E FS YG + + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 268 RKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVIS 327
Query: 103 DSDNIMFKEKRLNIAPAI-KKQG 124
+ K++ I A KK G
Sbjct: 328 EGRMRDLGGKQVEIKKAEPKKHG 350
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKG 85
Y A ++ G ++FVGG+ TTE+ + F +YG + I+ D+ + +G
Sbjct: 162 YGDASGDDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRG 221
Query: 86 YGFITF 91
+GF+TF
Sbjct: 222 FGFVTF 227
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR-LQK 102
++FVGGI+ +T E L E FS+YG V KI+VDR G S+G+ F+TF S EEA +Q
Sbjct: 35 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 94
Query: 103 DSDNIMFKEKRLNIA 117
D ++ + R+N A
Sbjct: 95 DGQDLHGRRIRVNYA 109
>gi|339238293|ref|XP_003380701.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 18 STQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVV 77
S + N+ F Y + N ++FV I + TE+E+ LF QYG ++ V++V+
Sbjct: 774 SDKPNSGFQYSVGLEKN----------KLFVKNIPTFATENEVETLFRQYGDLRSVRLVL 823
Query: 78 DRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNI 116
++G SKG ++ FD+EE A+R + + F KRL++
Sbjct: 824 HKSGRSKGLAYVEFDNEEAAERARLGQNGAHFLGKRLSV 862
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI +T TE+E + F+QYG VK +I+ D + S+G+GF+TFD+E+ L
Sbjct: 2116 KKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLS 2175
Query: 103 DSDNIMFKEKRLNIAPA 119
+ + ++ I A
Sbjct: 2176 QGNKLELAGAQVEIKKA 2192
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 12 NPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKR-VFVGGITSTTTEDELCELFSQYGIV 70
N SSP + Q F Y + P Y +R +F+GG+ TT + + F +YG +
Sbjct: 1997 NDSSPRTPQ--PFVEYVRRTIHETPYYTREGRRRKIFIGGLARETTSAQFIKHFGKYGEI 2054
Query: 71 KQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRL 114
I+ DR G +G+GF+T+ ++ +D+ I K+ +
Sbjct: 2055 TDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVINGKQVEI 2099
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + T +++L E+FS+YG + K++ D G S+G GF+ F S +EA R + +
Sbjct: 308 LYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEMN 367
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPV-PPVPTSNMYYHNGLPYTYHNGMAFF 164
M K L +A A +K+ + +PV P VPTS YH P GM+++
Sbjct: 368 GKMVGSKPLYVALAQRKEERRNRLQAAFAQRTPVGPAVPTSLPMYHPAGP-GMGPGMSYY 426
Query: 165 PSNGQSMVPTSPPTVPTQVKILLPPG 190
+ +P P Q +++ P G
Sbjct: 427 GQHPPGPIPLQPAAFGYQPQLIRPGG 452
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F+ +G + K+ D +G SKGYGF+ F+ EE A+ + +
Sbjct: 114 IFIKNLDKSIDNKALHDTFAAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVN 173
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P +++Q
Sbjct: 174 GMLLNDKQVFVGPFVRRQ 191
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + +TT+DEL ++F YG + ++ D G SK +GF+ F+ ++A + + +
Sbjct: 205 VYVKNLADSTTDDELKKVFEAYGPISSAVVMRDNEGKSKCFGFVNFEHADDAAKAVEALN 264
Query: 106 NIMFKEKRLNIAPAIKK 122
F EK + A KK
Sbjct: 265 GKKFDEKEWYVGRAQKK 281
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR 99
++VG + ST +E +L E+FSQ G V +++ D S GY ++ +++ ++A R
Sbjct: 26 LYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATR 80
>gi|326430454|gb|EGD76024.1| hypothetical protein PTSG_00734 [Salpingoeca sp. ATCC 50818]
Length = 355
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 6 PSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELF- 64
P+ GS P P + N ++ +++ + +RVFVG I TE+++ L
Sbjct: 56 PANGSVQP--PPAATNGTVRPHKQRTSSSREAEAEAMKRRVFVGNIGRQCTEEDIRRLVG 113
Query: 65 SQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAKR--LQKDSDNIMFKEKRLNIAPAIK 121
Q+G ++ + IV D SKGYGFI F +EEEA R + I F+ ++LN A +
Sbjct: 114 DQFGRIESINIVRDHVNHQSKGYGFIAFSTEEEANRCIALAEQHPIHFRSRQLNFREARR 173
Query: 122 KQ 123
++
Sbjct: 174 RE 175
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEEAKRL 100
V ++FVGG++ TTE L E FS++G V +VK+V+DR SKG+GF+ + SE +A+R
Sbjct: 30 VTTKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERA 89
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
+ + + + + + + K +G LP+ T VPPV +S
Sbjct: 90 KAEMNGKVLSGRIIFVDTVKPKSQLSG---DLPSAT--VPPVLSSK 130
>gi|256085765|ref|XP_002579083.1| rna recognition motif containing protein [Schistosoma mansoni]
gi|360043212|emb|CCD78624.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 412
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
+ +FVG I TE++L ELFS+ G V ++V DR +G KGYGF +++ A +
Sbjct: 16 RSIFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIAASALR 75
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPV 139
+ NI F + L I PA +Q S P+V P+
Sbjct: 76 NLQNIEFNGRPLRIGPAAGEQNSAELALSNPSVGPPL 112
>gi|226466604|emb|CAX69437.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[Schistosoma japonicum]
Length = 414
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
+ +FVG I TE++L ELFS+ G V ++V DR +G KGYGF +++ A +
Sbjct: 16 RSIFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIAASALR 75
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPV 139
+ NI F + L I PA +Q S P+V P+
Sbjct: 76 NLQNIEFNGRPLRIGPAAGEQNSAELALSNPSVGPPL 112
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI +T TE E E F QYG V + +I+ D + S+G+GFITFD+E+ L
Sbjct: 2015 KKIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLA 2074
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMY 148
+ + ++ I A K+ P PP+P+S Y
Sbjct: 2075 KGNKLELAGGQVEIKKAEPKK--------------PNPPLPSSKRY 2106
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 24 FFNYQAAVNNNAPKYGTVVPKR-VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AG 81
F +Y + P Y +R +F+GG+ TT + + F +YG + I+ DR G
Sbjct: 1906 FVDYVRRTIDETPFYKREARRRKIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTG 1965
Query: 82 ISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYD 130
+G+GF+T+ ++ +DS I K++ I I K G G D
Sbjct: 1966 QPRGFGFVTYADPSVVDQVIQDSHVI--NGKQVEIKRTIPK-GAIGARD 2011
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI ++ EDE + F QYG+VK+ +I+ D + S+G+GFITF++E+ L
Sbjct: 2009 KKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLA 2068
Query: 103 DSDNIMFKEKRLNIAPA 119
+ + + ++ I A
Sbjct: 2069 NGNRLEMAGSQVEIKKA 2085
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 11 SNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKR----VFVGGITSTTTEDELCELFSQ 66
SN SP + Q F +Y + P Y +R +FVGG+ TT + + F
Sbjct: 1886 SNEQSPRTPQ--PFVDYVRQTIDETPYYKREGRRRFNVKIFVGGLPRETTSAQFVKHFGD 1943
Query: 67 YGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRL 114
YG + I+ DR G +G+GF+T+ ++ +D+ I K+ +
Sbjct: 1944 YGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEI 1992
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V I T++EL E FSQ+G + K++ D GI+KG+GF+ F + +EAKR
Sbjct: 298 VYVKNIDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTLQ 357
Query: 106 NIMFKEKRLNIAPAIKKQ 123
MF K L +A A +K+
Sbjct: 358 GCMFHGKPLYLAIAQRKE 375
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + E+ L E FS++G + + I D G+S+G+GFI F++ ++AKR + +
Sbjct: 195 LYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFINFENSDDAKRALETLN 254
Query: 106 NIMFKEKRLNIAPAIKK 122
K + IA A KK
Sbjct: 255 GSQLGSKVIYIARAQKK 271
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ + L ELF ++G V K+ G SKGYGF+ F+SEE A + +
Sbjct: 104 VFVKNLSDSINSLGLQELFKKFGNVLSSKVATSDDGKSKGYGFVQFESEESANAAIESLN 163
Query: 106 NIMFKEKRLNIAPAIKK 122
+K++ + ++K
Sbjct: 164 GFTVGDKQIYVGKFVRK 180
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ TT E L + FS YG + KI+VDR G S+G+GFIT+ +EE+A
Sbjct: 32 KLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMA 91
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D + L ++ A ++
Sbjct: 92 LDGKDLHGRNLRVSAATER 110
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + T+D+L ELFS +G + KI+ D+ G+SKG
Sbjct: 390 FEQSMKDAADKYQG---QNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGS 446
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF++F + EEA + + + M K L +A A +K+ + + PVP P+
Sbjct: 447 GFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKAMLQAQFSQMRPVPMTPS 504
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L + FS +G + K+ +D G SKG+GF+ ++ EE A+ K +
Sbjct: 212 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLN 271
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K + + P ++KQ
Sbjct: 272 GMLINDKPVYVGPFLRKQ 289
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++FS+YG + +++ G S+ +GF+ F+S ++A R ++ +
Sbjct: 303 VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELN 362
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 363 GKKINDKEWYVGRAQKK 379
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
+Y + +++ + +++L ELFS++G + K+++D+ G+SKG GF+ F + EE
Sbjct: 308 RYEKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEE 367
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP-VPPVPTSNMYYHNGLP 154
A R + M +K L +A A +++ + + +P + P+P+ YH G P
Sbjct: 368 ASRALNGMNGKMIGKKPLYVAVAQRREERKARLQAHFTQIQAPGLSPMPSGLPGYHPGAP 427
Query: 155 YTYHNGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGV 191
+ FF M+P P Q ++L PG+
Sbjct: 428 RLAPQQL-FFGQGTAGMMPPQPAGYGFQQQLL--PGM 461
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TT++++L + FS YG + ++ D++G SKG+GF+ F S + A + +
Sbjct: 214 VYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAVEKLN 273
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A +K
Sbjct: 274 GTTFNDKVWYVGRAQRK 290
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ++ L E F+ +G V K+ VD G SKGYGF+ F++EE A+ +
Sbjct: 123 VFIKNLDTSIDNKALQETFASFGSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLN 182
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K + + ++ Q
Sbjct: 183 GMLINDKEVFVGRFVRHQ 200
>gi|393909222|gb|EJD75365.1| Sart3 protein [Loa loa]
Length = 879
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P N F Y ++ N +VFV + TE++L E+F+ +G V+ V+I
Sbjct: 697 PHDKGKNTEFRYSTSLERN----------KVFVNNVHYDATEEQLKEIFATFGAVRDVRI 746
Query: 76 VVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIA----PAIKKQ 123
V ++G SKG ++ F+++++A K S++++ E++L++A P K+Q
Sbjct: 747 VTHKSGKSKGCAYVEFENDDDAAVAVKASEDLILLERKLSVAISNPPKRKEQ 798
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+FV + T TEDEL ELFS++G V QV +VV++ SKG ++ F E A R ++
Sbjct: 446 RLFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEE 505
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
DN +F+ + L++ PA +K+
Sbjct: 506 LDNSIFQGRLLHVMPAREKK 525
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V + ED L + FSQ G + K++ + G S+ + FI F +E+EA+ K
Sbjct: 120 RICVKNLPKYVAEDRLRDHFSQKGEITDAKLMRTKEGKSRQFAFIGFRTEQEAEEALKFF 179
Query: 105 DN 106
+N
Sbjct: 180 NN 181
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + + +D+LCELFS YG + KI+ D G+SKG
Sbjct: 306 FEQSMKDAADKYQGL---NLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKGS 362
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
GF+ F + EEA + + + M K L +A A +K+
Sbjct: 363 GFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKE 399
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D G SKG+GF+ +D E A+ K +
Sbjct: 128 IFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLN 187
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ + D
Sbjct: 188 GMLINDKPVYVGPFLRKQERENSVD 212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++F YG + I+V G S+ +GFI F S ++A R ++ +
Sbjct: 219 VFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELN 278
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 279 GKKINDKEWYVGRAQKK 295
>gi|344232148|gb|EGV64027.1| multiple RNA-binding domain-containing protein 1 [Candida tenuis
ATCC 10573]
Length = 840
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 4 AHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCEL 63
+ P E + +PS T+ + + N+ T R+F+ I+ T+TE+E EL
Sbjct: 272 SKPEEKHDSAKAPSRTKPSVDPEVETHTNHVQKINET---GRLFIRNISYTSTEEEFREL 328
Query: 64 FSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
F+ YG +++V + +D R G SKG+ +I F + E+A + + D +F+ + L+I PA KK
Sbjct: 329 FASYGNLEEVHVAIDTRTGKSKGFVYIQFTNPEDAVKAYEVLDKEIFQGRLLHILPAEKK 388
Query: 123 Q 123
+
Sbjct: 389 K 389
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + T+DE ELF +YG V I VD G SKG+GF+ F++ +EA++ + +
Sbjct: 232 LYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGKSKGFGFVNFETHDEAQKAVDELN 291
Query: 106 NIMFKEKRLNIAPAIKK 122
+ K K+L ++ A KK
Sbjct: 292 DFELKGKKLFVSRAQKK 308
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + F+ +G V K+ D G SKGYGF+ +++ E A+ K +
Sbjct: 139 IFIKNLDEAIDNKALHDTFAAFGTVLSCKVATDETGRSKGYGFVHYETAEAAENAIKAVN 198
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I ++
Sbjct: 199 GMLLNDKKVYVGHHISRK 216
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
Y+ A KY V +++ + +D+L F +G + K++ D G SKG+
Sbjct: 319 YEQAKLEKLSKYQGV---NLYIKNLEDDVDDDKLRAEFEPFGTITSCKVMRDEKGQSKGF 375
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
GF+ F S +EA + + +N M K L ++ A +++
Sbjct: 376 GFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQRRE 412
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + T+D+L ELFS +G + KI+ D+ G+SKG
Sbjct: 191 FEQSMKDAADKYQG---QNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGS 247
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF++F + EEA + + + M K L +A A +K+ + + PVP P+
Sbjct: 248 GFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMRPVPMTPS 305
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L + FS +G + K+ +D G SKG+GF+ ++ EE A+ K +
Sbjct: 13 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLN 72
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ ++D
Sbjct: 73 GMLINDKPVYVGPFLRKQERDNSFD 97
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+D+L ++FS YG + +++ G S+ + F+ F+S ++A R ++ +
Sbjct: 104 VFVKNLSESTTKDDLVKVFSGYGTITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELN 163
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 164 GKKINDKEWYVGRAQKK 180
>gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
Length = 379
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA R + +
Sbjct: 53 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 112
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFFP 165
M K L IA A +K+ +L + P P S ++ G P +
Sbjct: 113 GKMIGRKPLYIALAQRKEDRRAHLQAL--FSQIRAPGPMSGFHHPPGGPMPGPPQHMYVG 170
Query: 166 SNGQSMVPTSP 176
NG SMVP+ P
Sbjct: 171 QNGASMVPSQP 181
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
V ++FVGG++ TTE L E FS+ G V + +IV+DR + SKG+GF+TF S +EA++
Sbjct: 32 VASKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKA 91
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTS 145
+ + F + + + A KQ F G P P PV +
Sbjct: 92 LMEFNGQQFNGRVIFVDYAKAKQSFGG--GRYPIARGPPDPVEVA 134
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
+Y + +++ + +++L ELFS++G + K+++D+ G+SKG GF+ F + EE
Sbjct: 298 RYEKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEE 357
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP-VPPVPTSNMYYHNGLP 154
A R + M +K L +A A +++ + + +P + P+P+ YH G P
Sbjct: 358 ASRALNGMNGKMIGKKPLYVAVAQRREERKARLQAHFTQIQAPGLSPMPSGLPGYHPGAP 417
Query: 155 YTYHNGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGV 191
+ FF M+P P Q ++L PG+
Sbjct: 418 RLAPQQL-FFGQGTAGMMPPQPAGYGFQQQLL--PGM 451
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TT++++L + FS YG + ++ D++G SKG+GF+ F S + A + +
Sbjct: 204 VYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAVEKLN 263
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A +K
Sbjct: 264 GTTFNDKVWYVGRAQRK 280
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ++ L E F+ +G V K+ VD G SKGYGF+ F++EE A+ +
Sbjct: 113 VFIKNLDTSIDNKALQETFASFGPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLN 172
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K + + ++ Q
Sbjct: 173 GMLINDKEVFVGRFVRHQ 190
>gi|297829856|ref|XP_002882810.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297328650|gb|EFH59069.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 231
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGY 86
+ A N + + T K++FVGGI ST TEDEL + FS+YG V + +++ D S+G+
Sbjct: 96 KGAGGNQSKDFKT---KKIFVGGIPSTVTEDELKDFFSKYGNVVEHQVIRDHETNRSRGF 152
Query: 87 GFITFDSEEEAKRL 100
GF+ FDSEE L
Sbjct: 153 GFVIFDSEEVVDEL 166
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
N+N P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT
Sbjct: 7 NDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFIT 66
Query: 91 FDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
F ++ + DN + K++ I I K
Sbjct: 67 FADPSVVDKVIE--DNHIINGKQVEIKRTIPK 96
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + T+D+L ELFS +G + KI+ D+ G+SKG
Sbjct: 390 FEQSMKDAADKYQG---QNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKGS 446
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF++F + EEA + + + M K L +A A +K+ + + PVP P+
Sbjct: 447 GFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKAMLQAQFSQMRPVPMTPS 504
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L + FS +G + K+ +D G SKG+GF+ ++ EE A+ K +
Sbjct: 212 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLN 271
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K + + P ++KQ
Sbjct: 272 GMLINDKPVYVGPFLRKQ 289
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++FS+YG + +++ G S+ +GF+ F+S ++A R ++ +
Sbjct: 303 VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELN 362
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 363 GKKINDKEWYVGRAQKK 379
>gi|294925396|ref|XP_002778913.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC 50983]
gi|239887759|gb|EER10708.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++F+GG+ T TE+++ + FSQ+G V V+I +D+ G S+G+GF+ F++ E +
Sbjct: 49 KIFIGGVPFTATEEDVADFFSQFGPVASVEIKMDKVTGRSRGFGFVVFETAEGKMGAMRR 108
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTG 127
+++ +++NI + F G
Sbjct: 109 KGDLVLHNRQINIGETTADRVFVG 132
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ ++FVGG++ TTE+ L E FS YG V + KIV DR + SKG+GF+TF S++EA+
Sbjct: 27 IAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENA 86
Query: 101 QKD 103
+D
Sbjct: 87 IED 89
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRL 100
K++FVGGI + TEDEL E FS YG + +I++D + G S+G+GF+TFDSE+ +R+
Sbjct: 73 KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERI 130
>gi|147804734|emb|CAN67089.1| hypothetical protein VITISV_033546 [Vitis vinifera]
Length = 145
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 31 VNNNAPKYGTVV-----PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISK 84
V P+ G V +++FVGGI S+ TEDEL + FS YG + + +I++D G S+
Sbjct: 40 VKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSR 99
Query: 85 GYGFITFDSEEEAKRL 100
G+GF+TF SE+ +RL
Sbjct: 100 GFGFVTFVSEDAVERL 115
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI + TED+L E FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 50 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 109
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ K++ I A K+
Sbjct: 110 EGRMHDLGGKQVEIKKAEPKK 130
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+FV + T TEDEL ELFS++G V QV +VV++ SKG ++ F E A R ++
Sbjct: 230 RLFVRNLPYTATEDELEELFSKFGNVSQVHLVVNKDTKRSKGIAYVLFTLPESAVRALEE 289
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
DN +F+ + L++ PA +K+
Sbjct: 290 LDNSIFQGRLLHVMPAREKK 309
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ K+++VG ++ TTED L LFSQ+G V KI+ DR +G SKG+GFI ++EEA
Sbjct: 1 MAKKLYVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAA 60
Query: 101 QKDSDNIMFKEKRLNIAPAIKK 122
++ F+ ++L + A+ K
Sbjct: 61 ITGTNGHEFEGRQLRVNEAMDK 82
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA R + +
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFFP 165
M K L IA A +K+ +L + P P S ++ G P +
Sbjct: 394 GKMIGRKPLYIALAQRKEDRRAHLQAL--FSQIRAPGPMSGFHHPPGGPMPGPPQHMYVG 451
Query: 166 SNGQSMVPTSP 176
NG SMVP+ P
Sbjct: 452 QNGASMVPSQP 462
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + ++ L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I++Q
Sbjct: 198 GMLMNDKQVFVGHFIRRQ 215
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + EDEL + F ++G++ ++ D++G S+ +GF+ F+ E A + +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290
Query: 106 NIMFKEKRLNIAPAIKK 122
I + L + A KK
Sbjct: 291 GISLGDDVLYVGRAQKK 307
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA R + +
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFFP 165
M K L IA A +K+ +L + P P S ++ G P +
Sbjct: 394 GKMIGRKPLYIALAQRKEDRRAHLQAL--FSQIRAPGPMSGFHHPPGGPMPGPPQHMYVG 451
Query: 166 SNGQSMVPTSP 176
NG SMVP+ P
Sbjct: 452 QNGASMVPSQP 462
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + ++ L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I++Q
Sbjct: 198 GMLMNDKQVFVGHFIRRQ 215
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + EDEL + F ++G++ ++ D++G S+ +GF+ F+ E A + +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290
Query: 106 NIMFKEKRLNIAPAIKK 122
I + L + A KK
Sbjct: 291 GISLGDDVLYVGRAQKK 307
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRL 100
K++FVGGI + TEDEL E FS YG + +I++D + G S+G+GF+TFDSE+ +R+
Sbjct: 88 KKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERI 145
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++FVGG++ TTE+ FS+YG V I+ DR +G +G+GF+TF
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTF 48
>gi|227204263|dbj|BAH56983.1| AT1G11650 [Arabidopsis thaliana]
Length = 271
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+FVG + + T+ L E F + Y VK K+V+DR G +KGYGF+ F E E R +
Sbjct: 157 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTE 216
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDS 131
+ + + + I PA K+G TG DS
Sbjct: 217 MNGVPCSTRPMRIGPAASKKGVTGQRDS 244
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE--EAKRLQ 101
+++VG + TTED L +LF QYG V+ VKI+ DR +G SKG+GF+ SEE EA
Sbjct: 4 KIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAISA 63
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTG 127
+ + ++ R+N A ++ F G
Sbjct: 64 LNQHELEGRQLRVNKAHERRRSSFGG 89
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
+N+P G+V V+V + TTTED+L E+F ++G + V ++ D G SK +GF+ F+
Sbjct: 295 DNSP--GSVKFNNVYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGRSKCFGFVNFE 352
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
S +EA +D + F +K + A KK
Sbjct: 353 SPDEAALAVQDLNGKKFSDKEWYVGRAQKK 382
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + T +++L ELF+++G + K++ D G S+G GF+ F S ++A R + +
Sbjct: 409 LYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMN 468
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
N M K L +A A +K+ + + PVP T
Sbjct: 469 NKMVGNKPLYVALAQRKEDRKARLQAQFSQMRPVPMAQT 507
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F +G + K+ D AG SKGYGF+ ++ +E A + +
Sbjct: 215 IFIKNLDKSIDNKALHDTFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLN 274
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 275 GMLMNDKKVYVGPFVRKQ 292
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 11/83 (13%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI +T TE+E + F+QYG VK +I+ D + S+G+GF+TFD+E+
Sbjct: 129 KKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAV----- 183
Query: 103 DSDNIMFKEKRLNIAPA---IKK 122
D+++ + +L +A A IKK
Sbjct: 184 --DDLLSQGNKLELAGAQVEIKK 204
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG+ TT + + F +YG + I+ DR G +G+GF+T+
Sbjct: 40 PGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTY 89
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGG+ S+ TEDEL E FS YG + + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 155 RKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVIS 214
Query: 103 DSDNIMFKEKRLNIAPAI-KKQG 124
+ K++ I A KK G
Sbjct: 215 EGRMRDLGGKQVEIKKAEPKKHG 237
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKG 85
Y A ++ G ++FVGG+ TTE+ + F +YG + I+ D+ + +G
Sbjct: 49 YGDASGDDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRG 108
Query: 86 YGFITF 91
+GF+TF
Sbjct: 109 FGFVTF 114
>gi|312080354|ref|XP_003142564.1| hypothetical protein LOAG_06982 [Loa loa]
Length = 737
Score = 59.7 bits (143), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P N F Y ++ N +VFV + TE++L E+F+ +G V+ V+I
Sbjct: 555 PHDKGKNTEFRYSTSLERN----------KVFVNNVHYDATEEQLKEIFATFGAVRDVRI 604
Query: 76 VVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIA----PAIKKQ 123
V ++G SKG ++ F+++++A K S++++ E++L++A P K+Q
Sbjct: 605 VTHKSGKSKGCAYVEFENDDDAAVAVKASEDLILLERKLSVAISNPPKRKEQ 656
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
+ ++FVGG++ T + L ++FS YG V + +I++DR G SKGYGFIT+ S EEA
Sbjct: 29 MSSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEA 85
>gi|186478756|ref|NP_564168.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9392682|gb|AAF87259.1|AC068562_6 Contains similarity to seb4D protein from Mus musculus gb|X75316
and contains a RNA recognition PF|00076 motif
[Arabidopsis thaliana]
gi|332192109|gb|AEE30230.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 291
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEE 96
+G +VFVGG+ T DE+ F Q+G + + I+ D+A G SKGYGF+TF +
Sbjct: 11 FGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDS 70
Query: 97 AKRLQKDSDNIMFKEK-RLNIA 117
A R D + ++ K NIA
Sbjct: 71 ATRAVADPNPVIDGRKANCNIA 92
>gi|238880627|gb|EEQ44265.1| multiple RNA-binding domain-containing protein 1 [Candida albicans
WO-1]
Length = 845
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+F+ I+ +E++ LFSQYG +++V I +D R G SKG+ ++ F +E+A R +
Sbjct: 311 RLFIRNISYEASEEDFRNLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRS 370
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
D +F+ + L+I PA KK+
Sbjct: 371 LDKQIFQGRLLHILPADKKK 390
Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TE++L E FS+ G V VK++ R G S+ + FI + S + A+R K
Sbjct: 3 RLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYF 62
Query: 105 DNIMFKEKRLNI 116
+ R+ +
Sbjct: 63 NKSFIDTARIEV 74
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
K++FVGGI ++ TEDE + FS++G V + +I+ D G S+G+GF+TFDSEE + +
Sbjct: 139 KKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEI 196
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 8 EGSSN----PSSPSSTQNNAFFNYQAAVNN-------NAPKYGTVVPKRVFVGGITSTTT 56
EGSS P SPS ++ + + + NN N T P ++F+GG++ T+
Sbjct: 4 EGSSKAEEVPQSPSDSETQSGKDGNSQENNGPQEQKNNGASRDTSSPGKIFIGGLSRETS 63
Query: 57 EDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKDS---DNIMFKEK 112
+ FS+YG + I+ DRA G +G+GF+T+ ++ KD D M + K
Sbjct: 64 SATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIKDKHFIDGKMVEIK 123
Query: 113 R 113
R
Sbjct: 124 R 124
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++FVGGI S+ TEDEL + FS YG + + +I++D G S+G+GF+TF SE+ +RL
Sbjct: 140 RKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERL 197
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF-DSEEEAKRLQK 102
++FVGGI+ T+E+ FS YG + I++DR G +G+GFITF D K L++
Sbjct: 52 KLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE 111
Query: 103 D 103
D
Sbjct: 112 D 112
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+FV + TTE+EL E FS++G V QV +VVD+ SKG +I + + + A R Q++
Sbjct: 288 RLFVRNLPYMTTEEELEEHFSRFGSVSQVHLVVDKDTKRSKGIAYILYTAPDIAARAQEE 347
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYD 130
DN +F+ + L++ A+++ YD
Sbjct: 348 LDNSIFQGRLLHVMQALQRHSDNQEYD 374
Score = 38.9 bits (89), Expect = 2.1, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 45 RVFVGGITSTTTEDELCELFS-QYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
R+ V + EDEL E FS + GI+ VK++ + G S+ + FI + +E+EA+ +
Sbjct: 19 RICVKNLPKDVGEDELREFFSGKGGIITDVKLMRTKDGKSRQFAFIGYRTEDEAQEAIRY 78
Query: 104 SDNIMFKEKRLNIAPAIKKQG 124
+ + R+ I +K G
Sbjct: 79 FNKNFLRTSRI-ICEVARKHG 98
>gi|68468570|ref|XP_721604.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
gi|46443527|gb|EAL02808.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
Length = 845
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+F+ I+ +E++ LFSQYG +++V I +D R G SKG+ ++ F +E+A R +
Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRS 370
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
D +F+ + L+I PA KK+
Sbjct: 371 LDKQIFQGRLLHILPADKKK 390
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TE++L E FS+ G V VK++ R G S+ + FI + S + A+R K
Sbjct: 3 RLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYF 62
Query: 105 DNIMFKEKRLNI 116
+ R+ +
Sbjct: 63 NKSFIDTARIEV 74
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K++FVGG+ ST TE++ + F Q+GI+ V ++ D + +G+GFIT+DSEE R+
Sbjct: 106 KKIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRV 163
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T E+ L E FS+YG V + I+ DR G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERV 63
>gi|242041311|ref|XP_002468050.1| hypothetical protein SORBIDRAFT_01g038700 [Sorghum bicolor]
gi|241921904|gb|EER95048.1| hypothetical protein SORBIDRAFT_01g038700 [Sorghum bicolor]
Length = 310
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T +D L E F +YG + + I+ D+ G SKGYGF+TF +
Sbjct: 24 FGDTTLTKVFVGGLAWETHKDTLREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADA 83
Query: 97 AKRLQKDSDNIMFKEKRLN 115
AK+ +D+ ++ +R N
Sbjct: 84 AKKACEDATPVI-NGRRAN 101
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++FVGG+ S+ TEDEL E FS YG + + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 155 RKIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERV 212
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKG 85
Y A ++ G ++FVGG+ TTE+ + F +YG + I+ D+ + +G
Sbjct: 49 YGDASGDDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRG 108
Query: 86 YGFITF 91
+GF+TF
Sbjct: 109 FGFVTF 114
>gi|68468327|ref|XP_721723.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
gi|74680318|sp|Q5AJS6.1|MRD1_CANAL RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46443655|gb|EAL02935.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
Length = 841
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+F+ I+ +E++ LFSQYG +++V I +D R G SKG+ ++ F +E+A R +
Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRS 370
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
D +F+ + L+I PA KK+
Sbjct: 371 LDKQIFQGRLLHILPADKKK 390
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TE++L E FS+ G V VK++ R G S+ + FI + S + A+R K
Sbjct: 3 RLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYF 62
Query: 105 DNIMFKEKRLNI 116
+ R+ +
Sbjct: 63 NKSFIDTARIEV 74
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE--EAKRLQ 101
+++VG + TTED L +LF QYG V+ VKI+ DR +G SKG+GF+ SEE EA
Sbjct: 4 KIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISA 63
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTG 127
+ + ++ R+N A ++ F G
Sbjct: 64 LNQHELEGRQLRVNKAHERRRSSFGG 89
>gi|320581035|gb|EFW95257.1| polyadenylate-binding protein [Ogataea parapolymorpha DL-1]
Length = 541
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+P ++V G+ TTT D+L +FS+YG + KI+ D G+SKGYGFI F EA Q
Sbjct: 93 LPGNLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDDFGVSKGYGFINFADRIEA---Q 149
Query: 102 KDSDNI 107
K DN+
Sbjct: 150 KAIDNL 155
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V T+++L ++F QYG V+ V + ++GY FI F S E+A R Q++ D
Sbjct: 190 LYVKNFPDDLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLD 249
Query: 106 NIMFKEKRLNIAPAIKKQ 123
IAP + Q
Sbjct: 250 G-------FEIAPGYRLQ 260
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI + TED+L E FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 189 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 248
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 249 EGRMHDLGGKQVEIKKA 265
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
+A G ++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+T
Sbjct: 88 GRDADSSGGDASGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVT 147
Query: 91 F 91
F
Sbjct: 148 F 148
>gi|350633123|gb|EHA21489.1| hypothetical protein ASPNIDRAFT_125918 [Aspergillus niger ATCC
1015]
Length = 264
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 46/71 (64%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+G + T ++L + +YG+V++V +V+D GISKGYG++ FDS + A+R +
Sbjct: 95 VFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDNRGISKGYGYVQFDSIDAAQRAVDALN 154
Query: 106 NIMFKEKRLNI 116
+F+ +R+ +
Sbjct: 155 MRLFEGRRVTV 165
>gi|255539422|ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
gi|223551477|gb|EEF52963.1| RNA-binding region-containing protein, putative [Ricinus communis]
Length = 259
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFIT 90
+N A ++G +VFVGG+ T +D + + F Q+G + + ++ D+A G SKGYGF+T
Sbjct: 4 SNLAGQFGDTTYTKVFVGGLAWETQKDTMKKYFEQFGEILEAVVITDKATGRSKGYGFVT 63
Query: 91 FDSEEEAKRLQKDSDNIMFKEKRLN 115
F E A R DS ++ +R N
Sbjct: 64 FRDPEAAMRACVDSAPVI-DGRRAN 87
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI + TED+L E FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 189 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 248
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 249 EGRMHDLGGKQVEIKKA 265
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
+A G ++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+T
Sbjct: 88 GRDADSSGGDASGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVT 147
Query: 91 F 91
F
Sbjct: 148 F 148
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
+N+P G V VFV ++ TTTED+L E+F ++G + V ++ + G SK +GF+ F+
Sbjct: 204 DNSP--GNVKFNNVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGRSKCFGFVNFE 261
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
S +EA +D + F +K + A KK
Sbjct: 262 SPDEAALAVQDLNGKKFDDKEWYVGRAQKK 291
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ + A KY +++ + T +++L ELF+++G + K++ D G S+G
Sbjct: 302 FEKNLQETADKYQNT---NLYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGS 358
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF+ F S E+A R + +N M K L +A A +K+ + + PVP PT
Sbjct: 359 GFVAFKSAEDASRALAEMNNKMVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPMAPT 416
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F +G + K+ D +G SKGYGF+ ++ +E A + +
Sbjct: 124 IFIKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAAHAAIEKLN 183
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P I+KQ
Sbjct: 184 GMLMNDKKVYVGPFIRKQ 201
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA R + +
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGLSRGFGFVAYSNPEEALRALSEMN 393
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFFP 165
M +K L IA A +K+ +L + P P S ++ G P + +
Sbjct: 394 GKMIGKKPLYIALAQRKEDRRAHLQAL--FSQIRAPGPMSGFHHPPGGPMSGPPQHMYVG 451
Query: 166 SNGQSMVPTSP 176
NG S+VP+ P
Sbjct: 452 QNGASLVPSQP 462
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + ++ L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I++Q
Sbjct: 198 GMLMNDKQVFVGHFIRRQ 215
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + EDEL + F ++G++ ++ D++G S+ +GF+ F+ E A + +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290
Query: 106 NIMFKEKRLNIAPAIKK 122
I + L + A KK
Sbjct: 291 GISLGDDVLYVGRAQKK 307
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K++FVGG+ ST TE+E + F QYGI+ V ++ D +G+GFIT+DSEE R+
Sbjct: 106 KKIFVGGLASTVTENEFKKYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVDRV 163
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T E+ L E FS+YG V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERV 63
>gi|357124087|ref|XP_003563738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 2 [Brachypodium distachyon]
Length = 354
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGGI ++ TE +L E FS YG V++ +I+VD + G S+G+GF+TF+SE+ +R+
Sbjct: 116 RKIFVGGIPTSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMS 175
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ K++ I A K+
Sbjct: 176 EGRMHDLGGKQVEIKRAEPKK 196
>gi|30682550|ref|NP_851001.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17065240|gb|AAL32774.1| Unknown protein [Arabidopsis thaliana]
gi|20260060|gb|AAM13377.1| unknown protein [Arabidopsis thaliana]
gi|332641793|gb|AEE75314.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 231
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
K++FVGGI ST TEDEL + F++YG V + +++ D S+G+GF+ FDSEE L
Sbjct: 109 KKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDEL 166
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
N+N P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT
Sbjct: 7 NDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFIT 66
Query: 91 F 91
F
Sbjct: 67 F 67
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ VD +G SKGYGF+ FD+EE A++ + +
Sbjct: 124 IFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLN 183
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K++ + P ++KQ T D
Sbjct: 184 GMLLNDKQVYVGPFLRKQERESTGD 208
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 17 SSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIV 76
S ++ ++ ++ A KY ++V + + +++L ELFS YG + K++
Sbjct: 292 SEREHELKIKFEQSMKEAADKYQGA---NLYVKNLDDSIADEKLKELFSSYGTITSCKVM 348
Query: 77 VDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
D G+S+G GF+ F + EEA R + + M K L + A +K+
Sbjct: 349 RDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKE 395
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+DEL + F ++G + ++ D G SK +GF+ F+S ++A R + +
Sbjct: 215 VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEALN 274
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 275 GKKIDDKEWYVGKAQKK 291
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 31 VNNNAPKYGTVV-----PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISK 84
V P+ G V +++FVGGI S+ TEDEL + FS YG + + +I++D G S+
Sbjct: 270 VKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSR 329
Query: 85 GYGFITFDSEEEAKRL 100
G+GF+TF SE+ +RL
Sbjct: 330 GFGFVTFVSEDAVERL 345
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 28 QAAVNNNAPKYGTVVP--KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISK 84
QA N++ G +++FVGGI+ T+E+ FS YG + I++DR G +
Sbjct: 181 QAEGNDDDDWMGESDEDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPR 240
Query: 85 GYGFITF 91
G+GFITF
Sbjct: 241 GFGFITF 247
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+F+ I+ +E++ +LFSQYG +++V I +D R G SKG+ ++ F +++A R +
Sbjct: 312 RLFIRNISYEASEEDFRKLFSQYGALEEVHIAIDTRTGKSKGFLYVQFSKKDDATRAYRS 371
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
D +F+ + L+I PA +K+
Sbjct: 372 LDKQIFQGRLLHILPADQKK 391
Score = 42.7 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TE++L E FS+ G V VK++ R G S+ + FI + S + A+R K
Sbjct: 3 RLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYF 62
Query: 105 DNIMFKEKRLNI 116
+ R+++
Sbjct: 63 NKSFIDTARIDV 74
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V++ I +D L E F+++G + KI+ D GISKG+GF+ +++ EEAK +
Sbjct: 321 VYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMR 380
Query: 106 NIMFKEKRLNIAPAIKKQ----GFTGTYDSLPTV---TSPVPPVPTSNMYY 149
+MF K L +A A +K+ + L T+ TSPV P Y+
Sbjct: 381 GVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVIPTGYPQFYF 431
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
NN KY + ++ + TE+ + FSQYG+V VKI+ G SKG+GF++F
Sbjct: 210 NNDDKYTNL-----YMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQ 264
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
+ E AKR ++ + ++ K L +A A KK
Sbjct: 265 NPESAKRAKESMNGMLLGSKTLYVARAQKK 294
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + L ELF ++G + K+ + G S+GYGF+ F +E A ++ +
Sbjct: 128 VFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLN 187
Query: 106 NIMFKEKRLNIAPAIKK 122
N F ++L++A IKK
Sbjct: 188 NSHFCGRQLHVATFIKK 204
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K+VFVGGI ++ TEDE + FS++G V + +I+ DR G S+G+GFITF++E+ + +
Sbjct: 129 KKVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIIS 188
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ K++ I A K+
Sbjct: 189 QGRMLELGGKQVEIKKAEPKK 209
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG++ +TT + FS+YG + I+ DR G +G+GF+T+
Sbjct: 41 PGKIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTY 90
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGG+++ TT D++ FSQYG V++ +++ D+ +G+GF+TFDSE+ ++ +
Sbjct: 109 KKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICE 168
Query: 103 DSDNIMFKEKRLNIAPAIKKQ----GFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYH 158
I F E + K Q F G PT + PP + Y G P Y
Sbjct: 169 ----IHFHEVNSKMVECKKAQPKEVMFQGALARDPTYFAVYPP---NFAAYGRGFP-GYA 220
Query: 159 NGMAF----FPSNG 168
G A+ FP G
Sbjct: 221 PGFAYPFPGFPGYG 234
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
P ++F+GG++ TT D L E FS++G V + ++ D+A S+G+GFITF
Sbjct: 20 PGKMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITF 69
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI + TED+L E FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 125 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 184
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 185 EGRMHDLGGKQVEIKKA 201
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V++ I +D L E F+++G + KI+ D GISKG+GF+ +++ EEAK +
Sbjct: 321 VYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMR 380
Query: 106 NIMFKEKRLNIAPAIKKQ----GFTGTYDSLPTV---TSPVPPVPTSNMYY 149
+MF K L +A A +K+ + L T+ TSPV P Y+
Sbjct: 381 GVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVIPTGYPQFYF 431
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
NN KY + ++ + TE+ + FSQYG+V VKI+ G SKG+GF++F
Sbjct: 210 NNDDKYTNL-----YMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQ 264
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
+ E AKR ++ + ++ K L +A A KK
Sbjct: 265 NPESAKRAKESMNGMLLGSKTLYVARAQKK 294
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + L ELF ++G + K+ + G S+GYGF+ F +E A ++ +
Sbjct: 128 VFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLN 187
Query: 106 NIMFKEKRLNIAPAIKK 122
N F ++L++A IKK
Sbjct: 188 NSHFCGRQLHVATFIKK 204
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
+VFVGGI+ T + L + FS YG V + K+++DR +G S+G+GF+TF S EEA
Sbjct: 32 KVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEA 85
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V I T+ EL +LFS G + VK++ D GISKG+GF+ F + EEA + +
Sbjct: 296 LYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMSFN 355
Query: 106 NIMFKEKRLNIAPAIKKQ---------------GFTGTYDSLPTVTSPVPPVPTSNMYYH 150
F K L IA A +K+ G G+ S P + VPP +YH
Sbjct: 356 GCTFHRKPLYIAIAQRKKERKTQLNLHYAPQQAGLDGS--STPVIPGGVPP-----YFYH 408
Query: 151 NGLPYTYHNGMAFFP 165
+ + +G+ + P
Sbjct: 409 SVASLMFQSGLLYQP 423
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + S TE L E FS +G + + I D G+SKG+ F+ +++ ++AK+ + +
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYENPDDAKKAMEAMN 252
Query: 106 NIMFKEKRLNIAPAIKK 122
+ F K L +A A KK
Sbjct: 253 GLQFGSKYLYVARAQKK 269
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + + L +LF +YG + K+V+ G SKGYGF+ F+ EE A +
Sbjct: 102 VFVKNLAGSIDNAGLHDLFKKYGNILSSKVVMSEDGKSKGYGFVQFEWEESA-------N 154
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
N + ++LN + KQ + G + P +N+Y N
Sbjct: 155 NAI---EKLNGSTVGNKQIYVGKFVRKGDRILPGYDAKYTNLYIKN 197
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAK 98
VP ++VG + E L F ++G + V++ DR + S YG++ F S+++A
Sbjct: 8 AAVPASIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSLCYGYVNFRSQQDAI 67
Query: 99 RLQKDSDN 106
R K +N
Sbjct: 68 RAIKLRNN 75
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+FVG + + T+ L E F + Y VK K+V+DR G +KGYGF+ F E E R +
Sbjct: 157 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTE 216
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDS 131
+ + + + I PA K+G TG DS
Sbjct: 217 MNGVPCSTRPMRIGPAASKKGVTGQRDS 244
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF 91
VFVGG+ ++ T+D L +FSQYG + VKI K GF+ F
Sbjct: 263 VFVGGLDASVTDDHLKNVFSQYGEIVHVKIPA-----GKRCGFVQF 303
>gi|1094717|prf||2106321A stage-specific activator protein
Length = 404
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
G K+VFVGGI+ T+++L ELF +G V+ V I+ D G +G+GF+T DSEE
Sbjct: 94 GDQRTKKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAV 153
Query: 98 KRLQKDSDNIMFKEKRLNIAPA 119
++L + ++ K K + I A
Sbjct: 154 EKLVR-MHHLELKGKSMEIKKA 174
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA--GISKGYGFITF 91
++FVGG+ T D F ++G + + +++D+ G +KG+GF+TF
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTF 55
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
++VF+GG+ S TEDE+ E F+++G V+ V I+VD+ S+G+GF+TFD EE +++
Sbjct: 100 RKVFMGGLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFDCEESVEKV 157
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ TT + + FS+YG V ++ + + G S+G+GF+TF K + +
Sbjct: 9 KIFVGGLSWDTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKTVLAN 68
Query: 104 SDNIM 108
+++
Sbjct: 69 QPHVL 73
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI + TED+L E FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 181 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 240
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 241 EGRMHDLGGKQVEIKKA 257
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
+A G +VFVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF
Sbjct: 83 DADSSGGDASGKVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTF 141
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGG++ T E L + FS YG + +V+++++RA G+SKG+GF+ F SE +A K
Sbjct: 35 KKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNALK 94
Query: 103 DSD--NIMFKEKRLNIAPAIKKQ 123
+ D ++ + R+N A +Q
Sbjct: 95 EMDGQSLDGRNIRVNFANTRARQ 117
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + T++E ELF++YG V + D G SKG+GF+ ++ EEA+R +
Sbjct: 225 LYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAVDELH 284
Query: 106 NIMFKEKRLNIAPAIKK 122
+ K K+L +A A KK
Sbjct: 285 DTDLKGKKLFVARAQKK 301
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + +D+L F +G + K++ D G SKG+GF+ F S +EA + + +
Sbjct: 328 LYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMN 387
Query: 106 NIMFKEKRLNIAPAIKKQ 123
N M K L ++ A +++
Sbjct: 388 NKMIGTKPLYVSLAQRRE 405
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + L + F +G V K+ D G SKGYGF+ +++ E A K +
Sbjct: 132 VFIKNLDEAIDNKALHDTFVAFGNVLSCKVATDEHGRSKGYGFVHYETAEAADNAIKSVN 191
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++ +K++ + I ++ D +
Sbjct: 192 GMLLNDKKVYVGHHISRKERQSKLDEM 218
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
+N+P G V V+V + TTTED+L E+F ++G + V ++ D G SK +GF+ F+
Sbjct: 202 DNSP--GNVKFNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFE 259
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
S +EA +D + F +K + A KK
Sbjct: 260 SPDEAALAVQDLNGKKFSDKEWYVGRAQKK 289
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + T +++L ELF+++G + K++ D G S+G GF+ F S ++A R + +
Sbjct: 316 LYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMN 375
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
N M K L +A A +K+ + + PVP T
Sbjct: 376 NKMVGNKPLYVALAQRKEDRKARLQAQFSQMRPVPMAQT 414
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F +G + K+ D AG SKGYGF+ ++ +E A + +
Sbjct: 122 IFIKNLDKSIDNKALYDTFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLN 181
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 182 GMLMNDKKVYVGPFVRKQ 199
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGGI ++ TE +L E FS YG V++ +I+VD + G S+G+GF+TF+SE+ +R+
Sbjct: 172 RKIFVGGIPTSLTEGKLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMS 231
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 232 EGRMHDLGGKQVEIKRA 248
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF R+ +D
Sbjct: 84 KIFVGGVAWETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLED 143
Query: 104 SDNI 107
I
Sbjct: 144 EHTI 147
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI + E E FSQYG + ++++D+ G S+G+GF+T+DS E R+ ++
Sbjct: 242 KIFVGGIGADVRPKEFEEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPEAVDRVCQN 301
Query: 104 SDNIMFKEKRLNIAPA----IKKQGFTGTYDSLPTVTSPVPPVPTSNM 147
I FK K++ I A ++K + G + TS PV +NM
Sbjct: 302 K-YIDFKGKQIEIKRAEPRHMQKGQYGGANPNNRGSTSGSAPVTGANM 348
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFD 92
++F+GG+ TTED L E F++YG V +KI+ D +G S+G+GF+TF+
Sbjct: 158 KMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFE 206
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + T++E ELF++YG V + D G SKG+GF+ ++ EEA+R +
Sbjct: 225 LYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQRAVDELH 284
Query: 106 NIMFKEKRLNIAPAIKK 122
+ K K+L +A A KK
Sbjct: 285 DTDLKGKKLFVARAQKK 301
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + +D+L F +G + K++ D G SKG+GF+ F S +EA + + +
Sbjct: 328 LYIKNLEDDFDDDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMN 387
Query: 106 NIMFKEKRLNIAPAIKKQ 123
N M K L ++ A +++
Sbjct: 388 NKMIGTKPLYVSLAQRRE 405
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + L + F +G V K+ D G SKGYGF+ +++ E A K +
Sbjct: 132 VFIKNLDEAIDNKALHDTFVAFGNVLSCKVATDEHGRSKGYGFVHYETAEAADNAIKSVN 191
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++ +K++ + I ++ D +
Sbjct: 192 GMLLNDKKVYVGHHISRKERQSKLDEM 218
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV ++S+ L ELFS++G V K+ + G S+GYGF+ F S+E A + +
Sbjct: 211 IFVKNLSSSVDNASLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNLN 270
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDS 131
+F +++L++A IKK + D
Sbjct: 271 GSLFNDRKLHVATFIKKSERSANNDD 296
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V++ I +D L F ++G + K++ D GIS+G+GF+ + + EEAK +
Sbjct: 404 VYIKNIHDEVDDDALRARFVEFGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSAVNNMR 463
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+MF K L +A +K+
Sbjct: 464 GVMFFGKPLYVAIFQRKE 481
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + TE+ + FSQ+G + VKI+ G S G+GF++F + E A + Q +
Sbjct: 301 LYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSLGFGFVSFQNPESAIKAQSTMN 360
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ K L +A A KK+
Sbjct: 361 GMLLGSKALYVARAQKKE 378
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
Length = 136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
+++FVGG+ T E L E+FS+YG V +V+I+ DR G S+G+GF+TF+S ++A+
Sbjct: 4 ERKLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQ 60
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GG++ +T E L E FS+YG V KI++DR G S+G+GFITF + EEA +
Sbjct: 41 KLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQA 100
Query: 104 SDN 106
DN
Sbjct: 101 MDN 103
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+FVG + + T+ L E F + Y VK K+V+DR G +KGYGF+ F E E R +
Sbjct: 157 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTE 216
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDS 131
+ + + + I PA K+G TG DS
Sbjct: 217 MNGVPCSTRPMRIGPAASKKGVTGQRDS 244
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE---EEAKRL 100
VFVGG+ ++ T+D L +FSQYG + VKI K GF+ F + EEA R+
Sbjct: 263 VFVGGLDASVTDDHLKNVFSQYGEIVHVKIPA-----GKRCGFVQFSEKSCAEEALRM 315
>gi|358254188|dbj|GAA54213.1| cleavage stimulation factor subunit 2 [Clonorchis sinensis]
Length = 437
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
+ +FVG I TE++L ELF + G V ++V DR +G KGYGF +++ A +
Sbjct: 21 RSIFVGNIPYEATEEKLIELFGKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIAASALR 80
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPV 139
+ NI F + L I PA +Q S P V P+
Sbjct: 81 NLQNIEFNGRPLRIGPAAGEQNSAELALSNPAVGPPL 117
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDS 93
P+ G V +++F+GGI TED+L E FS YG V+ V IV D+A G +G+GF+ FD
Sbjct: 102 PEAGATV-RKLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDD 159
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITF 91
V +++F+GG+ TT++ L F ++G + V ++ D + S+G+GFIT+
Sbjct: 16 VHRKIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITY 66
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + KI D +G SKGYGF+ FD+EE AK +
Sbjct: 122 IFIKNLDKAIDNKALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESAKNATDKLN 181
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 182 GMLLNDKQVYVGPFVRKQ 199
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + +D+L ELFS++G + K++ D GIS+G GF+ F + EEA R D +
Sbjct: 316 LYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMN 375
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 376 GKMVASKPLYVALAQRKE 393
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + +TT+++L +F +YG + ++ D G SK +GF+ F++ ++A R + +
Sbjct: 213 VYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFENADDAARSVEALN 272
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 273 GKKFDDKEWYVGKAQKK 289
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR 99
++VG + S T+ L +LF Q G V V++ D + S GYG++ + + ++A R
Sbjct: 34 LYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAAR 88
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGG+ ST TEDE + FS+YG V++ +I+ D S+G+GFI F+SEE +
Sbjct: 107 KKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILS 166
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ + I ++ I A K+
Sbjct: 167 EGNMIDMAGTQVEIKKAEPKK 187
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG+ TT + F +YG + I+ DR G +G+GF+T+
Sbjct: 18 PGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTY 67
>gi|134083605|emb|CAL00520.1| unnamed protein product [Aspergillus niger]
Length = 381
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 46/71 (64%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+G + T ++L + +YG+V++V +V+D GISKGYG++ FDS + A+R +
Sbjct: 198 VFIGNVFYDVTREDLKKAMEKYGVVEKVVLVLDNRGISKGYGYVQFDSIDAAQRAVDALN 257
Query: 106 NIMFKEKRLNI 116
+F+ +R+ +
Sbjct: 258 MRLFEGRRVTV 268
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF 91
N P+ K +FVG I+ TTE +L F QYG VK V++V D G S+GYGF+ +
Sbjct: 18 NAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVEDPEGKSRGYGFVEY 77
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLNI 116
+ EE+ K K +D +R+ +
Sbjct: 78 EKEEDMKAAYKYADGKKIDGRRVVV 102
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF--DSEEEAKRLQ 101
++FVGG+ TT+D + E FS +G V +VKI+ DR G S+G+GF+TF D + EA
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 102 KDSDNIMFKEKRLNIA 117
D ++ + R+N A
Sbjct: 103 LDGRDLAGRTIRVNYA 118
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELF++YG + K++ D G+S+G GF+ F S E+A R + +
Sbjct: 324 LYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMN 383
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
+ M K L +A A +K+ + + PVP P+
Sbjct: 384 SKMVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPLAPS 422
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
+N+P G V V+V ++ TTED+L E+F ++G + ++ + G SK +GF+ F+
Sbjct: 210 DNSP--GQVKFNNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFE 267
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
S ++A + ++ + F +K + A KK
Sbjct: 268 SPDDAAQAVQELNGKKFDDKEWYVGRAQKK 297
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F +G + K+ D +G SKGYGF+ ++ +E A+ +
Sbjct: 130 IFIKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLN 189
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P I+KQ
Sbjct: 190 GMLMNDKKVYVGPFIRKQ 207
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF--DSEEEAKRLQ 101
++FVGG+ TT+D + E FS +G V +VKI+ DR G S+G+GF+TF D + EA
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 102 KDSDNIMFKEKRLNIA 117
D ++ + R+N A
Sbjct: 103 LDGRDLAGRTIRVNYA 118
>gi|147789024|emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
K++FVGG+ ST TEDE + FS+YG V++ +I+ D S+G+GFI F+SEE
Sbjct: 92 KKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEE 144
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + + FS +G + K+ +D G+SKGYGF+ +D+EE AK + +
Sbjct: 121 IFVKNLDRSIDTKAFYDTFSHFGPILSCKVAMDENGVSKGYGFVHYDTEESAKEAIEKVN 180
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ K++ ++P IKKQ
Sbjct: 181 GMVIGGKKVEVSPFIKKQ 198
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 23/164 (14%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + T++ L ELF Q+G + KI+ D +G+S+G+GF+ F EEA +
Sbjct: 314 LYIKNLDDSFTDESLQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIAGMH 373
Query: 106 NIMFKEKRLNIAPAIKKQ--------------GFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
+ K K L + A KK+ G + +P+V VP ++ +Y
Sbjct: 374 LKIVKGKPLYVGLAEKKEQRLSRLQQSSRSRNGDSMNQGPIPSVLHGVPGYQDASGFYGQ 433
Query: 152 GL------PYTYHNGMAFFPSNGQSMVPTSPPTVPTQVKILLPP 189
G G+ +P QS +P P + LPP
Sbjct: 434 GFRGGPQGVGVPGRGVRMYP---QSHIPVMPRNMHLSSGSPLPP 474
>gi|5007080|gb|AAD37807.1| poly(A)-binding protein [Oryza sativa]
Length = 183
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELF++YG + K++ D G+S+G GF+ F S E+A R + +
Sbjct: 51 LYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMN 110
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
+ M K L +A A +K+ + + PVP P+
Sbjct: 111 SKMVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPLAPS 149
>gi|357489687|ref|XP_003615131.1| RNA-binding protein [Medicago truncatula]
gi|355516466|gb|AES98089.1| RNA-binding protein [Medicago truncatula]
Length = 283
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T DE+ F Q+G + + I+ D+ G SKGYGF+TF E
Sbjct: 9 QFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPE 68
Query: 96 EAKRLQKDSDNIM-FKEKRLNIA 117
A+R D + ++ + NIA
Sbjct: 69 SARRACADPNPVIDGRRANCNIA 91
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L E FS +G + K+ VD AG SKG+GF+ +D EE A+ K +
Sbjct: 124 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLN 183
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ ++D
Sbjct: 184 GMLINDKPVFVGPFVRKQERDHSFD 208
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + + +D+LCELFS +G + K++ D+ G+SKG
Sbjct: 302 FEQSLKDAADKYQGL---NLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKGS 358
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
GF+ F + EEA + + + M K L +A A +K+
Sbjct: 359 GFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKE 395
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++F +YG + +++ G S+ +GFI F++ + A ++ +
Sbjct: 215 VFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDGKSRCFGFINFENPDAASHAVQELN 274
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 275 GKKINDKEWYVGRAQKK 291
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
K++FVGG+ ST TEDE FS+YG V + +I+ D S+G+GFI FDSEE
Sbjct: 107 KKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEE 159
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT+ R+
Sbjct: 18 PGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVI 77
Query: 102 KDSDNIMFKE 111
+D+ I K+
Sbjct: 78 EDTHVINGKQ 87
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
K++FVGG+ ST TEDE FS+YG V + +I+ D S+G+GFI FDSEE
Sbjct: 107 KKIFVGGVPSTVTEDEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEE 159
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT+ R+
Sbjct: 18 PGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVI 77
Query: 102 KDSDNIMFKE 111
+D+ I K+
Sbjct: 78 EDTHVINGKQ 87
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
G K++FVGGI T+DEL E FS YG V + +I++D G S+G+GF+TFD E+
Sbjct: 124 GVFKTKKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSV 183
Query: 98 KRL 100
+++
Sbjct: 184 EKV 186
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++FVGGI+ T+++ FS+YG V I+ ++ +G +G+GF+TF
Sbjct: 41 KLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTF 88
>gi|326431512|gb|EGD77082.1| RNA binding protein [Salpingoeca sp. ATCC 50818]
Length = 386
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
++VF+GG+ E+E+ + FS+YG V+ V I DR +G +G+GF+ F+++ +L
Sbjct: 120 RKVFLGGLPHDAKEEEIKDFFSKYGDVEDVIIQYDRISGRPRGFGFVVFENDATVDQLVT 179
Query: 103 DSDNIM--FKEKRLNIAPAIKKQ 123
S+ + FK KR+ I A K+
Sbjct: 180 SSERVYVEFKGKRVEIKRAFPKE 202
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGI-SKGYGFITF 91
+++FVG + TT ++L + F ++G + ++ D G S+G+GF+TF
Sbjct: 19 RKIFVGSLDPRTTREQLVDYFDKFGNIVDCVVMTDAQGTRSRGFGFVTF 67
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 4 AHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCEL 63
A P++ + P + S Q +P R+FV I T+TE+E L
Sbjct: 314 ADPAKTTEEPDTADSN-----IEVQETKQEESPSEKIAKTGRLFVRNILYTSTEEEFRTL 368
Query: 64 FSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
F +YG +++V I VD R G SKG+ ++ F ++A K D +F+ + L+I PA K
Sbjct: 369 FQKYGSLEEVHIAVDTRTGKSKGFVYVQFKQPKDAVEAYKSLDKQIFQGRLLHILPAEAK 428
Query: 123 Q 123
+
Sbjct: 429 K 429
>gi|242083906|ref|XP_002442378.1| hypothetical protein SORBIDRAFT_08g019135 [Sorghum bicolor]
gi|241943071|gb|EES16216.1| hypothetical protein SORBIDRAFT_08g019135 [Sorghum bicolor]
Length = 213
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFVGG+ + TE L E+FS G + V+I+ D+ G SKGYGF+ F E A ++ +
Sbjct: 77 VFVGGLPRSATESMLREIFSSCGEIIDVRIMKDQNGHSKGYGFVRFSKREYANTAKRQKN 136
Query: 106 NIMFKEKRLNI 116
I + KRL++
Sbjct: 137 GIELQGKRLDV 147
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V I T++EL E FSQ G + K++ D G SKG+GF+ F S EEA +
Sbjct: 297 VYVKNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFH 356
Query: 106 NIMFKEKRLNIAPAIKKQ 123
MF K L +A A +K+
Sbjct: 357 GYMFHRKPLYVAIAQRKE 374
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ + L ELF ++G V K+ G SKG+GF+ F+SE DS
Sbjct: 103 VYVKNLSESIDNVGLQELFGEFGTVLSCKVATFEDGKSKGHGFVQFESE--------DSA 154
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
N ++LN + KQ + G + P P +N+Y N
Sbjct: 155 NSAI--EKLNGSIVGDKQIYVGKFVKKSDRVLPSPDAKYTNLYVKN 198
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + TE+ L E FS++G + V I D G S+G+GF+ F++ ++A+ + +
Sbjct: 194 LYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPDDARWAMERMN 253
Query: 106 NIMFKEKRLNIAPAIKK 122
K L + A K+
Sbjct: 254 GTELGSKVLYVGRAQKR 270
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V++ I+ ++ L E F ++G + VKI+ D GISKG+GF+ +++ +EAK
Sbjct: 385 VYIKNISDRVDDETLRERFDEFGNITSVKIMRDDKGISKGFGFVCYNTPDEAKCAVSSMR 444
Query: 106 NIMFKEKRLNIAPAIKKQG----FTGTYDSLPTVTSPVPPV-PTSNMYYHNGLPYTY 157
+MF +K L +A A +K+ + L T+ PV PT G P+ Y
Sbjct: 445 GVMFYDKPLYVAIAQRKEDRKARLEQRFAELATMVGAASPVIPT-------GYPHVY 494
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + L ELFS++G + K+ + G S+GYGF+ F ++E A ++ +
Sbjct: 192 VFVKNLNDHIDNVILQELFSKFGDILSCKVARNDDGTSRGYGFVQFAAQESADIAIENLN 251
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDS 131
N F+ ++L++A IKK + D
Sbjct: 252 NSHFEGRQLHVAHFIKKSERSANNDD 277
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
NN KY + ++ + TE+ + FSQ+G + VKI+ G SKG+GF++F
Sbjct: 274 NNDDKYTNL-----YMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFK 328
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
S + AK+ ++ + I K L +A A KK
Sbjct: 329 SPDSAKKAKEAMNGIPLGSKSLYVARAQKK 358
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ +D +G SKGYGF+ FD+EE A + + +
Sbjct: 119 IFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLN 178
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K++ + P ++KQ G D
Sbjct: 179 GMLLNDKQVYVGPFLRKQERDGVVD 203
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ TTTE++L + FS++G + + ++ D G S+ +GF+ F++ ++A R +
Sbjct: 210 VFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLN 269
Query: 106 NIMFKEKRLNIAPAIKK 122
+ +K + A KK
Sbjct: 270 GKLVDDKEWYVGKAQKK 286
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELF+ +G + K++ D GIS+G GF+ F + +EA R + +
Sbjct: 313 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 372
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 373 GKMVVSKPLYVALAQRKE 390
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR 99
++FVGG++ TTE L + FS YG V + K++ DR + SKGYGF+TF S++EA++
Sbjct: 33 KLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEK 88
>gi|47551207|ref|NP_999784.1| stage specific activator protein [Strongylocentrotus purpuratus]
gi|4071008|gb|AAC98546.1| stage specific activator protein [Strongylocentrotus purpuratus]
Length = 382
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
G K+VFVGGI+ T+++L ELF +G V+ V I+ D G +G+GF+T DSEE
Sbjct: 94 GDQRTKKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAV 153
Query: 98 KRLQKDSDNIMFKEKRLNIAPA 119
++L + ++ K K + I A
Sbjct: 154 EKLVR-MHHLELKGKSMEIKKA 174
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA--GISKGYGFITF 91
++FVGG+ T D F ++G + + +++D+ G +KG+GF+TF
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTF 55
>gi|412986499|emb|CCO14925.1| RNA-binding protein [Bathycoccus prasinos]
Length = 716
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+VFVGG+ T TE+E+ FSQYG V +V+++ D+ G SK YGF+ F E A + KD
Sbjct: 455 QVFVGGLPKTATEEEVGWFFSQYGPVARVRLIYDKETGASKRYGFVEFAHPEIAAAV-KD 513
Query: 104 SDNIMFKEKRLNI 116
N+ F+ + +++
Sbjct: 514 LRNLQFQNRTIDV 526
>gi|449501704|ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 576
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ +D +G SKGYGF+ FD+EE A + + +
Sbjct: 41 IFIKNLDKAIDHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLN 100
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K++ + P ++KQ G D
Sbjct: 101 GMLLNDKQVYVGPFLRKQERDGVVD 125
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ TTTE++L + FS++G + + ++ D G S+ +GF+ F++ ++A R +
Sbjct: 132 VFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENADDAARAVDTLN 191
Query: 106 NIMFKEKRLNIAPAIKK 122
+ +K + A KK
Sbjct: 192 GKLVDDKEWYVGKAQKK 208
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELF+ +G + K++ D GIS+G GF+ F + +EA R + +
Sbjct: 235 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 294
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 295 GKMVVSKPLYVALAQRKE 312
>gi|212276326|ref|NP_001130962.1| Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|194690564|gb|ACF79366.1| unknown [Zea mays]
gi|195616124|gb|ACG29892.1| ribonucleoprotein like protein [Zea mays]
gi|224030751|gb|ACN34451.1| unknown [Zea mays]
gi|414592149|tpg|DAA42720.1| TPA: Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|414592150|tpg|DAA42721.1| TPA: Ribonucleoprotein like protein isoform 2 [Zea mays]
Length = 370
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K+VFVGG+ TTE+E F +G V V ++ D A S+G+GF+TFDSEE ++ +
Sbjct: 137 KKVFVGGLQDDTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMR 196
Query: 103 DS 104
S
Sbjct: 197 QS 198
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSE 94
+++FVGGI + E +L F+++G V+ V ++ DR G +G+GF+ F+ +
Sbjct: 8 RKLFVGGIPAGAQEADLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFEDK 59
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + T +++L ELF+ YG + K++ D G S+G GF+ F S EEA R + +
Sbjct: 312 LYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMN 371
Query: 106 NIMFKEKRLNIAPAIKKQG----FTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGM 161
M K L +A A +K+ + + T SP VPTS YH G + M
Sbjct: 372 GKMVGSKPLYVALAQRKEERRARLQAAFAQMRTSVSPA--VPTSLPMYHPGPGMSPQ--M 427
Query: 162 AFFPSNGQSMVPTSPPTVPTQVKILLPPG 190
++ + +P P Q +I+ P G
Sbjct: 428 PYYGQHPSGPIPLQPAAFGYQPQIIRPGG 456
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L + FS +G + K+ VD +G SKGYGF+ F+ EE A + +
Sbjct: 118 IFIKNLDKTIDNKALHDTFSAFGGILSCKVAVDGSGQSKGYGFVQFEQEESALTAIEKVN 177
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P +++Q
Sbjct: 178 GMLLNDKQVFVGPFVRRQ 195
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + TTED+L +F YG + ++ D G SK +GF+ F+ + A + + +
Sbjct: 209 VYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFEHPDNAAKAVEALN 268
Query: 106 NIMFKEKRLNIAPAIKK 122
EK + A KK
Sbjct: 269 GKKRDEKEWYVGRAQKK 285
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR----- 99
++VG + +E +L ELF+Q G V +++ D S GY ++ ++S ++A R
Sbjct: 30 LYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRALELL 89
Query: 100 ----LQKDSDNIMFKEKRLNIAPAIKKQG 124
L + IMF + P+I+K G
Sbjct: 90 NFSVLNGNPIRIMFSHR----DPSIRKSG 114
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ K+++VG ++ T+ED L LFS +G V KI+ DR G SKG+GF+ ++EEA
Sbjct: 22 MAKKLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEASAA 81
Query: 101 QKDSDNIMFKEKRLNIAPAIKK 122
++ F+ ++L + A+ K
Sbjct: 82 IAGTNGREFEGRQLRVNEAMDK 103
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
++VFVGG++ TTED+ E FSQ+G V + +I+ D +G S+G+GF+TF + A+ +
Sbjct: 93 RKVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFA 152
Query: 103 DSDNIMFKEKRLNIAPAIKK 122
K++ + PA K
Sbjct: 153 AGTMHDLGGKKVEVKPATPK 172
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GG++ TTE++L + FS+YG + + ++ DR G +G+GF+TF A + +D
Sbjct: 10 KLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVED 69
>gi|110738919|dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana]
Length = 205
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
K++FVGGI ST TEDEL + F++YG V + +++ D S+G+GF+ FDSEE L
Sbjct: 109 KKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDEL 166
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
N+N P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT
Sbjct: 7 NDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFIT 66
Query: 91 F 91
F
Sbjct: 67 F 67
>gi|290985740|ref|XP_002675583.1| predicted protein [Naegleria gruberi]
gi|284089180|gb|EFC42839.1| predicted protein [Naegleria gruberi]
Length = 756
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQ----YGIVKQVKIVVDRAGISKGY 86
++ +AP + + +R+FVGG+ TT+E EL + FS+ YG + I+ G S+G+
Sbjct: 305 LSRDAPDNPSFINRRIFVGGLKETTSEQELIDFFSRSPNNYGPISHCVIMKKWDGRSRGF 364
Query: 87 GFITFDSEEEAKRL 100
GF+TF E AK++
Sbjct: 365 GFVTFSDESIAKKV 378
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 22/142 (15%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+R+FVGG+ T+ + + FS++G ++ ++++++R + FIT+ SE+ A ++ D
Sbjct: 482 RRIFVGGLQPQVTKQAVHDYFSKHGTIEDLQLILNRR---TPFAFITYTSEDSATKVLDD 538
Query: 104 -SDNIMFKE-KRLNIAPAIKKQGFTGT--YDSLPTVTSPVPPVPTSNMYYHNGLPYTYHN 159
++ KE ++ A+ K F+ T + +T VPP H G+P T
Sbjct: 539 FHSGVLCKEFAAHDVRRAMPKGSFSFTKQREREMDMTRRVPP--------HRGMPPTE-- 588
Query: 160 GMAFFPSNGQSMVPTSPPTVPT 181
S Q+ +P S P VP+
Sbjct: 589 -----TSTRQAPIPNSQPIVPS 605
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ T E L + FS++G V + +I++DR +G S+G+GFITF S EEA
Sbjct: 33 KLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTS 92
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D + + + + A ++
Sbjct: 93 MDGKELQGRNIRVNHANER 111
>gi|194695198|gb|ACF81683.1| unknown [Zea mays]
gi|414592148|tpg|DAA42719.1| TPA: hypothetical protein ZEAMMB73_519506 [Zea mays]
Length = 313
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K+VFVGG+ TTE+E F +G V V ++ D A S+G+GF+TFDSEE ++ +
Sbjct: 137 KKVFVGGLQDDTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMR 196
Query: 103 DS 104
S
Sbjct: 197 QS 198
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSE 94
+++FVGGI + E +L F+++G V+ V ++ DR G +G+GF+ F+ +
Sbjct: 8 RKLFVGGIPAGAQEADLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFEDK 59
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K GT P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 206 NRAAALANNLQK-GTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 264
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 265 GYGFITFSDSECAKK 279
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
+ ++FV G+ +TTE++L E FSQYG V + IV+++A KG+G++TF EEEA++
Sbjct: 30 ITSKIFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKA 89
Query: 101 Q 101
Q
Sbjct: 90 Q 90
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQK 102
KR+F+ +T + ED++ ELF YG ++QV + VD + KG+ ++ F ++++A R +
Sbjct: 287 KRLFLRNLTYSCQEDDIVELFQDYGALEQVHVPVDKKTNAPKGFAYVEFKNKDDAIRAYQ 346
Query: 103 DSDNIMFKEKRLNIAPA 119
D D + F+ + L+I PA
Sbjct: 347 DLDGLAFQGRLLHILPA 363
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 4 AHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCEL 63
A P++ + P + S Q +P R+FV I T+TE+E L
Sbjct: 314 ADPAKTTEEPDTADSN-----IEVQETKQEESPSEKIAKTGRLFVRNILYTSTEEEFRTL 368
Query: 64 FSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
F +YG +++V I VD R G SKG+ ++ F ++A K D +F+ + L+I PA K
Sbjct: 369 FQKYGSLEEVHIAVDTRTGKSKGFVYVQFKQPKDAVEAYKSLDKQIFQGRLLHILPAEAK 428
Query: 123 Q 123
+
Sbjct: 429 K 429
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ T E L + FS++G V + +I++DR +G S+G+GFITF S EEA
Sbjct: 33 KLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTS 92
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D + + + + A ++
Sbjct: 93 MDGKELQGRNIRVNHANER 111
>gi|297845256|ref|XP_002890509.1| hypothetical protein ARALYDRAFT_313119 [Arabidopsis lyrata subsp.
lyrata]
gi|297336351|gb|EFH66768.1| hypothetical protein ARALYDRAFT_313119 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T DE+ F Q+G + + I+ D+ G SKGYGF+TF +
Sbjct: 11 FGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKTTGKSKGYGFVTFRESDS 70
Query: 97 AKRLQKDSDNIMFKEK-RLNIA 117
A R D + ++ K NIA
Sbjct: 71 ATRAVADPNPVIDGRKANCNIA 92
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI ++ EDE + F QYG+VK+ +I+ D + S+G+GFITF++E+
Sbjct: 94 KKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAV----- 148
Query: 103 DSDNIMFKEKRLNIA 117
D+++ RL +A
Sbjct: 149 --DDLLANGNRLEMA 161
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
V +++FVGG+ TT + + F YG + I+ DR G +G+GF+T+
Sbjct: 4 VCRKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTY 54
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGG+ ST TEDE + FS+YG V++ +I+ D S+G+GFI F+SEE +
Sbjct: 107 KKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILS 166
Query: 103 DSDNIMFKEKRLNIAPA 119
+ + I ++ I A
Sbjct: 167 EGNMIDMAGTQVEIKKA 183
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG+ TT + F +YG + I+ DR G +G+GF+T+
Sbjct: 18 PGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTY 67
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ V KY V ++V + T +++L ELFS+YG + K++ D +GIS+G
Sbjct: 308 FEQTVKEQVDKYQGV---NLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGS 364
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
GF+ F + EEA R + + M K L +A A +K+
Sbjct: 365 GFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQRKE 401
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L E FS +G + KI D +G SKGYGF+ +DSEE A+ +
Sbjct: 130 IFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLN 189
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++KQ
Sbjct: 190 GMLMNDKQVYVGVFLRKQ 207
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V ++ +T+ED+L + F +YG + V ++ D G SK +GF+ F++ E+A + +
Sbjct: 221 IYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAVDALN 280
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 281 GKKFDDKEWYVGKAQKK 297
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR 99
++VG + + T+ +L +LF+Q G V V++ D + G S GYG++ + ++++A R
Sbjct: 42 LYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATR 96
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K GT P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 234 NRAAAMANNLQK-GTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 292
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 293 GYGFITFSDSECAKK 307
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++FVGG+ ++ +ED+L + FS YG V + +I+VD + G S+G+GF+TF+SE+ +R+
Sbjct: 154 RKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERV 211
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF ++ +D
Sbjct: 66 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 125
Query: 104 SDNI 107
NI
Sbjct: 126 EHNI 129
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+VFV G+ +TTE+EL + FSQYG V + I++++A SKG+G++ F EEEA + Q D
Sbjct: 34 KVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGYVIFAKEEEACKAQID 93
Query: 104 SD 105
+
Sbjct: 94 MN 95
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P T F Y+ + N ++FV G++ TTT+++L +F +G +K V+I
Sbjct: 754 PDKTSRGPIFKYKTELEKN----------KLFVKGLSPTTTKEDLENIFRVHGSLKDVRI 803
Query: 76 VVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIA 117
V R G SKG ++ FD E A + +D + +K +N+A
Sbjct: 804 VTYRNGHSKGLAYVEFDDENCAAKALVATDGMTIADKVINVA 845
>gi|326531316|dbj|BAK05009.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V++ I+ +D L E F+++G + VKI+ D GISKG+GF+ + + +EAK
Sbjct: 59 VYIKNISDEVDDDTLRERFAEFGNITSVKIMRDDKGISKGFGFVCYSTPDEAKCAVSSMR 118
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD-------SLPTVTSPVPPVPTSNMYY 149
+MF K L +A A +K+ + ++ SPV P ++Y+
Sbjct: 119 GVMFYGKPLYVAIAQRKEDRKARLEQRFAELATMAGTASPVIPTGYPHVYF 169
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P+ ++ N Q ++ A + P +++VG + TE+ + +FS +G V+QV+I
Sbjct: 178 PTQSEKNKIAAAQLSLQKAA-----LGPTKLYVGSLHENITEEMIKGIFSPFGRVEQVQI 232
Query: 76 VVDRAGISKGYGFITFDSEEEAKR 99
+ D AG S+GYGFITF E AKR
Sbjct: 233 IKDDAGASRGYGFITFAEAECAKR 256
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K GT P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 232 NRAAALANNLQK-GTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 290
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 291 GYGFITFSDSECAKK 305
>gi|443682493|gb|ELT87074.1| hypothetical protein CAPTEDRAFT_222846 [Capitella teleta]
Length = 841
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
K+ T + K ++FV G+ TT D + +F QYG +K V++V R G+SKG ++ F SE
Sbjct: 689 KFATSLEKNKLFVKGLPRTTGRDAVENIFKQYGAIKDVRLVTYRNGVSKGLAYVEFVSES 748
Query: 96 EAKRLQKDSDNIMFKEKRLNIA 117
EA + +D +M + +++A
Sbjct: 749 EAAQAVMKADGLMVGDHEISVA 770
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 30 AVNNNAPKYGTVVPKR-VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
AV + AP Y + R FV ++ E L E+FS+ G V V++V + G SKG+ +
Sbjct: 589 AVEDQAPIYDSSHDNRKAFVSNLSYDVDEQRLQEIFSKLGEVINVRLVTNFKGQSKGFAY 648
Query: 89 ITFDSEEEAKR 99
I F E A++
Sbjct: 649 IEFKDELLAQK 659
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++FVGG+ ++ +ED+L + FS YG V + +I+VD + G S+G+GF+TF+SE+ +R+
Sbjct: 134 RKIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERV 191
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF ++ +D
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 105
Query: 104 SDNI 107
NI
Sbjct: 106 EHNI 109
>gi|219880797|gb|ACL51672.1| truncated RNA binding motif protein Y-linked [Macaca mulatta]
Length = 231
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+T T E L +F ++G + +V ++ DR S+G+ F+TF++ E+AK K
Sbjct: 7 PGKLFIGGLTRKTNEKMLKAVFVKHGPISEVLLIKDRTRKSRGFAFVTFENPEDAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|392563464|gb|EIW56643.1| hypothetical protein TRAVEDRAFT_128184 [Trametes versicolor
FP-101664 SS1]
Length = 216
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSE 94
P+ + R FVGG++ +TT + + FSQYG V ++VDR G SKG+GF+TF+
Sbjct: 89 PREEHLRNTRYFVGGLSHSTTSESMRTFFSQYGKVVDCTVMVDRETGRSKGFGFVTFEDA 148
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
++L N+ EK++ AP + ++ LP S P + S
Sbjct: 149 SNTEQLVGQP-NLFLDEKQVRTAPEMP----CSSHSRLPRSKSKSPSLAASE 195
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDE-LCELFSQYGIVKQVKIVVDRAGISKGYGFITF 91
++FVGG++ TT+ E L + FS++G V+ I+ D+ G S+G+ F+TF
Sbjct: 14 KMFVGGLSWDTTDAEGLRKYFSEFGEVEDCTILRDQDGRSRGFAFLTF 61
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
++ +VFVGGI+ +T + L E F++YG V + +++VDR G S+G+GF+T+ S EEA
Sbjct: 39 SMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEA 97
>gi|413954078|gb|AFW86727.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 278
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
K++FVGGI + TED+L E FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 181 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 238
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFIT 90
+A G +VFVGG+ TTE+ + F +YG + I+ D+ + +G+GF+T
Sbjct: 81 ERDADSSGGDASGKVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVT 140
Query: 91 F 91
F
Sbjct: 141 F 141
>gi|449670860|ref|XP_002155052.2| PREDICTED: uncharacterized protein LOC100213259 [Hydra
magnipapillata]
Length = 1006
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRLQKD 103
++F+GGI S TE EL FS++G VK V+IV DR KGYGF+TF+ + + RL
Sbjct: 911 KLFIGGIPSKVTEKELNIFFSEFGNVKDVRIVTDRITAECKGYGFVTFEDKSVSDRLIA- 969
Query: 104 SDNIMFKEKRLNIAPAIKKQG--FTGTYDSLPTVTSP 138
+ + ++L + A+++ F + L + +P
Sbjct: 970 TKTVRMNGRKLRLRKAVQRSASQFDKVSEQLRGINAP 1006
>gi|255565834|ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
gi|223536836|gb|EEF38475.1| RNA-binding region-containing protein, putative [Ricinus communis]
Length = 256
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
++N+ +G +VFVGG+ T ++ + E F +YG + + I+ D+ G SKGYGF+
Sbjct: 3 MSNSVGPFGDTTLTKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKLTGRSKGYGFV 62
Query: 90 TFDSEEEAKRLQKDSDNIMFKEKRLN 115
TF E AK+ +D+ M +R N
Sbjct: 63 TFKEPEAAKKACEDA-TPMINGRRAN 87
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGGI S+ TEDE FS+YG V + +I+ D S+G+GFI FDSEE +
Sbjct: 107 KKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLS 166
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ + I ++ I A K+
Sbjct: 167 NGNMIDMAGTQVEIKKAEPKK 187
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT+ ++
Sbjct: 18 PGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI 77
Query: 102 KDSDNIMFKE 111
+D+ I K+
Sbjct: 78 EDTHVIHGKQ 87
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + FS +G + ++V+D AG SKGYGF+ F+ EE A+ + +
Sbjct: 116 IFIKNLEKSIDNKALHDTFSAFGTILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVN 175
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ ++++++AP I+KQ
Sbjct: 176 GMLINDRQVSVAPFIRKQ 193
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ I + +++L ELF+ +G V K++ G S G GF+TF + EEA + D +
Sbjct: 309 LYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMN 368
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 369 GKMVGSKPLYVALAQRKE 386
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + TT+++L ++F+ +G + ++ D G SK +GF+ F++ ++A ++ +
Sbjct: 206 VYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVDDAANAVENLN 265
Query: 106 NIMFKEKRLNIAPAIKK 122
+ EK + A KK
Sbjct: 266 GKLINEKEWYVGRAQKK 282
>gi|260812205|ref|XP_002600811.1| hypothetical protein BRAFLDRAFT_229359 [Branchiostoma floridae]
gi|229286101|gb|EEN56823.1| hypothetical protein BRAFLDRAFT_229359 [Branchiostoma floridae]
Length = 531
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 7 SEGSSNPSSP---SSTQNNAFF-------NYQAAVNNNAPKYGT-------VVPKR---V 46
SE +NP P + QN A Y N KYG V P R V
Sbjct: 2 SENDANPQGPQGITGAQNEAALLSLMERTGYNIIQENGQRKYGGPPPGWEGVTPSRGCEV 61
Query: 47 FVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDN 106
FVG I EDEL +F G + ++++++D G ++GY F+ + S ++AKR K +N
Sbjct: 62 FVGKIPRDLFEDELVPVFESIGKIYELRLMMDFNGNNRGYAFVMYTSRDDAKRAVKQLNN 121
Query: 107 IMFKEKR-LNIAPAI 120
++ R L + P++
Sbjct: 122 YEIRKGRLLGVCPSV 136
>gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
gi|46100873|gb|EAK86106.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
Length = 342
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 8 EGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQY 67
E S +S ++T+ Y+ + N +A K +F+ + + TE +L F Y
Sbjct: 98 ELESRAASKAATKQRGLETYKPSNNPDA---TPDAYKTLFLARLDYSVTESDLHREFDMY 154
Query: 68 GIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNI 116
G ++Q+K++ D+ G S+GY FI ++ E + K KD++ I +R+ +
Sbjct: 155 GPIEQIKLIRDKNGKSRGYAFIAYERERDMKAAYKDAEGIKINGRRVMV 203
>gi|383866009|ref|XP_003708464.1| PREDICTED: uncharacterized protein LOC100882315 [Megachile
rotundata]
Length = 646
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 41 VVPKRVFVGGI-TSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
V R+FVG + T T+ EL E FS+YG V V +++R G+GF+ F+ E+ A++
Sbjct: 11 TVSSRIFVGHLQTDDMTKHELEEHFSKYGTV--VGSLINR-----GFGFVQFEEEQSAQK 63
Query: 100 LQKDSDNIMFKEKRLNIAPAIK 121
++ D MFK +R+++ PA K
Sbjct: 64 AIQNEDGAMFKGRRIDVRPAKK 85
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRL 100
V R+F+ I T+TE E +LF QYG +++V I VD R G SKG+ ++ F++ +A +
Sbjct: 306 VTGRLFIRNILYTSTEAEFRDLFEQYGPLQEVHIAVDTRTGKSKGFVYVQFENSSDAVQA 365
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQ 123
+ D +F+ + L+I P KK+
Sbjct: 366 YEALDKQIFQGRLLHILPGEKKK 388
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
R+ V G+ TED+L E F + G V VK++ R G S+ + F+ + S E+A++
Sbjct: 3 RLIVKGLPKYYTEDKLREFFGKQGDVTDVKLMKKRNGESRRFAFVGYKSFEDAEK 57
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L E FS +G + K+ +D AG SKG+GF+ ++ EE A+ K +
Sbjct: 136 IFIKNLDKTIDNKTLHETFSSFGTILSCKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLN 195
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ ++D
Sbjct: 196 GMLINDKPVFVGPFLRKQERDHSFD 220
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + + +D+L ELFS +G + K++ D+ G+SKG
Sbjct: 314 FEQSLKDAADKYQGL---NLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSKGS 370
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSP-VPPVPT 144
GF+ F + EEA + + + M K L +A A +K+ + + P VP PT
Sbjct: 371 GFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMRPAVPMTPT 429
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++F +YG + +++ G S+ +GFI F++ + A R ++ +
Sbjct: 227 VFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKSRCFGFINFENPDAASRAVQELN 286
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 287 GKKINDKEWYVGRAQKK 303
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
+ R+F+GG++ TED L E FSQYG V + IV D+ KG+GF+ F SEE A +
Sbjct: 35 ITYRLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKA 94
Query: 101 QKD 103
+++
Sbjct: 95 KEE 97
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
++ +VFVGGI+ +T + L E F++YG V + +++VDR G S+G+GF+T+ S EEA
Sbjct: 39 SMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEA 97
>gi|115452347|ref|NP_001049774.1| Os03g0286500 [Oryza sativa Japonica Group]
gi|108707565|gb|ABF95360.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548245|dbj|BAF11688.1| Os03g0286500 [Oryza sativa Japonica Group]
Length = 310
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDS 93
A +G +VFVGG+ T +D L E F ++G + + I+ D+ G SKGYGF+TF
Sbjct: 24 AAAFGDTTLTKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKE 83
Query: 94 EEEAKRLQKDSDNIMFKEKRLN 115
+ AK+ +D+ ++ +R N
Sbjct: 84 ADAAKKACEDATPVI-NGRRAN 104
>gi|356552894|ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788516 [Glycine max]
Length = 274
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEE 95
++G +VFVGG+ T +E+ + F Q+G + + I+ D++ G SKGYGF+TF E
Sbjct: 9 QFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKSTGKSKGYGFVTFRDPE 68
Query: 96 EAKRLQKDSDNIM-FKEKRLNIA 117
A+R D + ++ + NIA
Sbjct: 69 SARRACADPNPVIDGRRANCNIA 91
>gi|297606021|ref|NP_001057893.2| Os06g0566100 [Oryza sativa Japonica Group]
gi|53793272|dbj|BAD54495.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|53793315|dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|215765227|dbj|BAG86924.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677149|dbj|BAF19807.2| Os06g0566100 [Oryza sativa Japonica Group]
Length = 285
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGGI + TED+L E FS YG V + +I++D G S+G+GF+TF++E+ +R+
Sbjct: 58 RKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMS 117
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ K++ I A K+
Sbjct: 118 EGRMHDLAGKQVEIKKAEPKK 138
>gi|343426198|emb|CBQ69729.1| related to SNP1-U1 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 336
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +F+ ++ TE +L F YG ++ +++V DR G S+GY FI ++ E + K KD
Sbjct: 126 KTLFLARLSYDVTEKDLHREFDMYGPIETIRLVRDRNGKSRGYAFIAYERERDMKAAYKD 185
Query: 104 SDNIMFKEKRLNI 116
+D I +R+ +
Sbjct: 186 ADGIKIHGRRVMV 198
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ K+++VG ++ TTED L LFS++G V KI+ DR G SKG+GFI ++EEA
Sbjct: 1 MAKKLYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAA 60
Query: 101 QKDSDNIMFKEKRLNIAPAIKK 122
++ F ++L + A+ K
Sbjct: 61 IAGTNGREFDGRQLRVNEAMDK 82
>gi|146421021|ref|XP_001486462.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
gi|146389877|gb|EDK38035.1| hypothetical protein PGUG_02133 [Meyerozyma guilliermondii ATCC
6260]
Length = 159
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSE 94
PK + + ++VG + +T +L E FS G V++V I+ DR +G+SKG+ +I FD+
Sbjct: 31 PKQEEIDQRSIYVGNVEYLSTPGQLEEFFSAVGTVERVTILFDRYSGLSKGFAYIEFDTT 90
Query: 95 EEAKRLQKDSDNIMFKEKRLNIAP 118
E A+R ++ F E+ L I+P
Sbjct: 91 EAAERAIEELHGKKFNERELRISP 114
>gi|8052542|gb|AAF71806.1|AC013430_15 F3F9.20 [Arabidopsis thaliana]
Length = 302
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T DE+ F Q+G + + I+ D+ G SKGYGF+TF +
Sbjct: 11 FGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDS 70
Query: 97 AKRLQKDSDNIMFKEK-RLNIA 117
A R D + ++ K NIA
Sbjct: 71 ATRAVADPNPVIDGRKANCNIA 92
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G SKGYGF+ FD+EE A++ + +
Sbjct: 118 IFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLN 177
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K++ + P ++KQ T D
Sbjct: 178 GMLLNDKQVYVGPFLRKQERESTAD 202
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+DEL +F ++G + ++ D G SK +GF+ F++ ++A R + +
Sbjct: 209 VFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEALN 268
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 269 GKKFDDKEWYVGKAQKK 285
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 17 SSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIV 76
S +N ++ ++ A KY ++V + + +D+L ELFS +G + K++
Sbjct: 286 SERENELKQRFEQSMKEAADKYQGA---NLYVKNLDDSLGDDKLKELFSPFGTITSCKVM 342
Query: 77 VDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
D GIS+G GF+ F + +EA R + + M K L + A +K+
Sbjct: 343 RDPNGISRGSGFVAFSTPDEASRALLEMNGKMVVSKPLYVTLAQRKE 389
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + T+ +L +LF+Q G V V++ D + S GYG++ F + ++A R
Sbjct: 30 LYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAAR 84
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEA 97
+ ++FVGG++ TT+ L E FSQYG V + IV DR SKG+GF+TF SE+EA
Sbjct: 29 IATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEA 85
>gi|66549578|ref|XP_623710.1| PREDICTED: hypothetical protein LOC551309 [Apis mellifera]
Length = 645
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 41 VVPKRVFVGGI-TSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
V R+FVG + T T+ EL E FS+YG V + I++G+GF+ F+ E+ A++
Sbjct: 11 TVSSRIFVGHLQTDDMTKLELEEHFSKYGTVVG-------SSINRGFGFVQFEEEQSAQK 63
Query: 100 LQKDSDNIMFKEKRLNIAPAIKKQGFTG 127
++ D MFK +R+++ PA K +G
Sbjct: 64 AIQNEDGAMFKGRRIDVRPAKKDNQSSG 91
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G++ KI D +G+SKGYGF+ FDSEE A+ +
Sbjct: 123 IFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDSEESAQNAIDKLN 182
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++KQ
Sbjct: 183 GMLINDKQVYVGHFLRKQ 200
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ +A KY V +++ + T ++++L E+F++YG + K++ D GI +G
Sbjct: 301 FEQSIKESADKYQGV---NLYLKNLDDTISDEKLKEMFAEYGTITSCKVMRDPTGIGRGS 357
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF+ F + EEA R + + M K L +A A +K+ + + PV P+
Sbjct: 358 GFVAFSTPEEASRALGEMNGKMIAGKPLYVALAQRKEDRRARLQAQFSQMRPVAITPS 415
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ +TT++EL + F +YG + I+ D G S+ +GF+ F++ ++A + + +
Sbjct: 214 VYVKNLSESTTDEELMKFFGEYGTITSAVIMRDADGKSRCFGFVNFENPDDAAKAVEGLN 273
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 274 GKKVDDKEWYVGKAQKK 290
>gi|18411885|ref|NP_565175.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|21537200|gb|AAM61541.1| RNA recognition motif-containing protein SEB-4 [Arabidopsis
thaliana]
gi|124300976|gb|ABN04740.1| At1g78260 [Arabidopsis thaliana]
gi|332197966|gb|AEE36087.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T DE+ F Q+G + + I+ D+ G SKGYGF+TF +
Sbjct: 11 FGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDS 70
Query: 97 AKRLQKDSDNIMFKEK-RLNIA 117
A R D + ++ K NIA
Sbjct: 71 ATRAVADPNPVIDGRKANCNIA 92
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+FV + TTE+EL E F +YG V +V +VVD+ SKG +I + E AKR ++
Sbjct: 292 RLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEE 351
Query: 104 SDNIMFKEKRLNIAPA 119
DN +F+ + L++ PA
Sbjct: 352 LDNSIFQGRLLHVMPA 367
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + L + FS +G + K+ VD +G SK YGF+ +++EE A+ + +
Sbjct: 117 IFVKNLDKSIDTKSLYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVN 176
Query: 106 NIMFKEKRLNIAPAIKKQGFTG 127
++ KR+ +AP ++KQ G
Sbjct: 177 GMLIGGKRVEVAPFLRKQDREG 198
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
V +++ + + ++ L ELF +G + K+++D S+G+GF+ F + +EA +
Sbjct: 304 VTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATK 361
>gi|380019771|ref|XP_003693776.1| PREDICTED: uncharacterized protein LOC100869186 [Apis florea]
Length = 643
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 41 VVPKRVFVGGI-TSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
V R+FVG + T T+ EL E FS+YG V + I++G+GF+ F+ E+ A++
Sbjct: 11 TVSSRIFVGHLQTDDMTKLELEEHFSKYGTVVG-------SSINRGFGFVQFEEEQSAQK 63
Query: 100 LQKDSDNIMFKEKRLNIAPAIKKQGFTG 127
++ D MFK +R+++ PA K +G
Sbjct: 64 AIQNEDGAMFKGRRIDVRPAKKDNQSSG 91
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+FV + TTE+EL E F +YG V +V +VVD+ SKG +I + E AKR ++
Sbjct: 292 RLFVRNLPYATTEEELEEHFQKYGTVSEVHLVVDKDTRRSKGLAYIHYTLPESAKRALEE 351
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
DN +F+ + L++ PA K+
Sbjct: 352 LDNSIFQGRLLHVMPAELKK 371
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ + A KY + +++ + ++D+L ELFS +G + K++ D+ G+SKG
Sbjct: 305 FEQSMKDAADKYQG---QNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKGS 361
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF+ F + EEA + + + M K L +A A +K+ + + PVP P+
Sbjct: 362 GFVAFSTREEASQAITEMNGKMLSGKPLYVAFAQRKEERKAMLQAQFSQMRPVPITPS 419
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L + FS +G + K+ D G SKG+GF+ ++ EE A+ K +
Sbjct: 127 IFIKNLDKTIDNKTLHDTFSAFGAILSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLN 186
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ ++D
Sbjct: 187 GMLINDKPVYVGPFLRKQERDNSFD 211
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++FS+YG + ++V G S+ +GFI F+S ++A R ++ +
Sbjct: 218 VFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKSRCFGFINFESPDDAVRAVEELN 277
Query: 106 NIMFKEKRLNIAPAIKK 122
+K A KK
Sbjct: 278 GKKINDKEWYCGRAQKK 294
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + ++ T+ +L ELFSQ G V V++ D + S GY ++ F + +A R
Sbjct: 39 LYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAAR 93
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDS 104
V V GI +D+L E FS++G + V I VDR G+S+G+GF+ F +A+ +D
Sbjct: 513 VKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAEDAIRDM 572
Query: 105 DNIMFKEKRLNIAPAI 120
DN F+ R+ +A A+
Sbjct: 573 DNKEFQGNRITVAAAM 588
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
G P ++FVGG++ TT + L FS+YG + K++ DR G S+G+GF+TF ++ +A
Sbjct: 3 GEKEPGKLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDA 62
Query: 98 KRLQKDSDNIMFKEKRLNIAPAIKK 122
+K D +++ + A KK
Sbjct: 63 ANAKKCMDGTELDSRQIRVDYASKK 87
>gi|449525794|ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231499 [Cucumis sativus]
Length = 266
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T ++ + + F ++G + + I+ D+ G SKGYGF+TF E
Sbjct: 20 FGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAES 79
Query: 97 AKRLQKDSDNIM-FKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
AK+ +DS I+ + N+A ++G + + + P P P P SN
Sbjct: 80 AKKACEDSAPIINGRRANCNLASLGARRGGSRSASATP----PQAPQPGSN 126
>gi|449451717|ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202850 [Cucumis sativus]
Length = 266
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T ++ + + F ++G + + I+ D+ G SKGYGF+TF E
Sbjct: 20 FGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAES 79
Query: 97 AKRLQKDSDNIM-FKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
AK+ +DS I+ + N+A ++G + + + P P P P SN
Sbjct: 80 AKKACEDSAPIINGRRANCNLASLGARRGGSRSASATP----PQAPQPGSN 126
>gi|395645925|ref|ZP_10433785.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395442665|gb|EJG07422.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R++VG +T + TE +L ELFSQYG VK VKI+ D KG+GF+ S EEA++ ++
Sbjct: 5 RLYVGNLTYSVTEKQLEELFSQYGDVKSVKIIGD-----KGFGFVEMGSPEEAEKAKEAL 59
Query: 105 DNIMFKEKRLNIAPA 119
+ +F + L I A
Sbjct: 60 NETVFVGRTLRIDEA 74
>gi|221126679|ref|XP_002159636.1| PREDICTED: deleted in azoospermia protein 2-like [Hydra
magnipapillata]
Length = 268
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
V + F+GG+ +T TE L ++FS++G VK V+IV DR KGYGF+TFD + + L
Sbjct: 31 VRNKCFLGGVPATVTEKVLEDIFSRFGRVKDVRIVTDRITAECKGYGFVTFDESDNIENL 90
Query: 101 QKDSDNIMFKEKRLNIAPAIKK 122
NI K++ + A ++
Sbjct: 91 LA-MKNIEVNGKKIRVRKANRR 111
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ VD +G SKGYGF+ +DS+E A++ + +
Sbjct: 117 IFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLN 176
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 177 GMLLNDKQVYVGPFVRKQ 194
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + ++D+L ELFS YG + K++ D +G+SKG GF+ F + EEA R + +
Sbjct: 311 LYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMN 370
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 371 GKMVVSKPLYVALAQRKE 388
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +T E+EL ++F ++G + V ++ D G S+ +GF+ F++ E+A R + +
Sbjct: 208 VFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALN 267
Query: 106 NIMFKEKRLNIAPAIKK 122
K + A KK
Sbjct: 268 GYKLDNKDWFVGRAQKK 284
>gi|388492860|gb|AFK34496.1| unknown [Medicago truncatula]
Length = 256
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 32 NNNAP-KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFI 89
NN +P ++G +VFVGG+ T +D L E F +YG + + I+ D+ G SKGYGF+
Sbjct: 5 NNGSPSQFGDTTLTKVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFV 64
Query: 90 TFDSEEEAKRLQKDSDNIMFKEKRLN 115
TF + AK+ ++ ++ +R N
Sbjct: 65 TFKDADSAKKACEEP-TVIINGRRAN 89
>gi|237838769|ref|XP_002368682.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966346|gb|EEB01542.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|221481488|gb|EEE19874.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
gi|221505448|gb|EEE31093.1| hypothetical protein TGVEG_080800 [Toxoplasma gondii VEG]
Length = 492
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 17 SSTQNNAFFNYQAAVNNNAPKY------GTVVPKR-VFVGGITSTTTEDELCELFSQYGI 69
S A FN Q A+ + G V KR +FVGG+ + +E ++ + FS++G
Sbjct: 159 SEEAKEAIFNAQHAIGGKKVEVRPLHDDGNVSLKRKIFVGGVNPSLSESDVEKCFSKFGT 218
Query: 70 VKQVKIVVDRA-GISKGYGFITFDSEEEAKRL---------QKDSDNIMFKEKR 113
V +V I+ D A G S+G+GF+ F SEE AK + +KDS + E R
Sbjct: 219 VDKVSIIRDAATGKSRGFGFVVFASEESAKEVLKSKRHNLNEKDSCEVRAAESR 272
>gi|303290769|ref|XP_003064671.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453697|gb|EEH51005.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 394
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVV----DRAGISKGYGFITFDSEE 95
KR+FVGG+T TTED + E FSQ+G V + +++ D G S+ +GF+TFD+EE
Sbjct: 173 KRLFVGGLTRETTEDSMREYFSQFGDVVKAEVMRHTQGDHKGESRCFGFVTFDAEE 228
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFS-QYGIVKQVKIVVDRA-GISKGYGFITF 91
V +VFVGG+ TT + LC F ++G V +++DRA G S+G+GF+TF
Sbjct: 17 VADCKVFVGGLHPLTTAETLCGYFGRRFGEVIDAVVMIDRATGRSRGFGFVTF 69
>gi|197209735|dbj|BAG68909.1| RNA binding protein [Arabidopsis thaliana]
Length = 359
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 12/114 (10%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS---KGYGFITFDSEEEAKRL 100
K++FVGG++S TTE+E F ++G + +VV G++ +G+GF+T+DSE+ + +
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFG--RTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVV 177
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSL----PTVTS--PVPPVPTSNMY 148
+ S+ +KR+ + AI K+G + PT +S P VP N Y
Sbjct: 178 MQ-SNFHELSDKRVEVKRAIPKEGIQSNNGNAVNVPPTYSSFQATPYVPEQNGY 230
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGGI T+E+ L + FS+YG V + + ++ G +G+GF+ F ++ + + +D
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ I+ K +++ AI+K
Sbjct: 67 THFIL--GKPVDVRKAIRKH 84
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGGI + TED+L E FS YG V + +I++D G S+G+GF+TF++E+ +R+
Sbjct: 180 RKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMS 239
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 240 EGRMHDLAGKQVEIKKA 256
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTF 139
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGGI + TED+L E FS YG V + +I++D G S+G+GF+TF++E+ +R+
Sbjct: 117 RKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMS 176
Query: 103 DSDNIMFKEKRLNIAPA 119
+ K++ I A
Sbjct: 177 EGRMHDLAGKQVEIKKA 193
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTF 76
>gi|395324233|gb|EJF56678.1| RNA-binding protein Prp24 [Dichomitus squalens LYAD-421 SS1]
Length = 1028
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+ V+V G++ T+++L LF YG VK V++++D G SKG+ F+ F++E +A R
Sbjct: 782 REVYVAGLSKLVTKEDLENLFKTYGTVKDVRMILDDKGRSKGFAFVEFETENDA-RAALA 840
Query: 104 SDNIMFKEKRLNIAPA 119
++N K++R+ + A
Sbjct: 841 ANNHELKQRRMAVTLA 856
>gi|449532815|ref|XP_004173374.1| PREDICTED: RNA-binding protein 38-like [Cucumis sativus]
Length = 272
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFIT 90
+N A ++G +VFVGG+ T +D + + F Q+G + + ++ D+A G SKGYGF+T
Sbjct: 4 SNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVT 63
Query: 91 FDSEEEAKRLQKDSDNIMFKEKRLN 115
F + A R D+ ++ +R N
Sbjct: 64 FREPDAAMRACVDASPVI-DGRRAN 87
>gi|194697728|gb|ACF82948.1| unknown [Zea mays]
gi|414866250|tpg|DAA44807.1| TPA: hypothetical protein ZEAMMB73_243908 [Zea mays]
Length = 297
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T +D L E F +YG + + I+ D+ G SKGYGF+TF +
Sbjct: 20 FGDTTLTKVFVGGLAWETHKDALREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADA 79
Query: 97 AKRLQKDSDNIM 108
AK+ +D+ ++
Sbjct: 80 AKKACEDATPVI 91
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V I + TT+DE ELF +YG + + D+ G +G+GF+ + E+A + + +
Sbjct: 236 IYVKNIDTETTDDEFRELFEKYGEITSASLARDQEGKVRGFGFVNYIRHEDANKAVDELN 295
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+I FK ++L + A KK
Sbjct: 296 DIDFKSQKLYVGRAQKKH 313
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 44/87 (50%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F+ +G + K+ D +G S+GYGF+ +++ E A K +
Sbjct: 143 IFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDESGGSRGYGFVHYETAEAANAAIKSVN 202
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++ EK++ + I K+ ++ +
Sbjct: 203 GMLLNEKKVFVGHHIPKKDRMSKFEEM 229
>gi|405963050|gb|EKC28659.1| RNA-binding protein 24-A [Crassostrea gigas]
Length = 223
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ TT+ L E F ++G +++ ++ DR G S+GYGF+T + E A+R KD
Sbjct: 14 KIFVGGLPYHTTDKSLREFFDKFGEIEEAVVITDRQTGKSRGYGFVTMANREAAERACKD 73
Query: 104 SDNIMFKEK-RLNIA 117
+ I+ K +N+A
Sbjct: 74 PNPIIDGRKANVNLA 88
>gi|297839699|ref|XP_002887731.1| hypothetical protein ARALYDRAFT_476993 [Arabidopsis lyrata subsp.
lyrata]
gi|297333572|gb|EFH63990.1| hypothetical protein ARALYDRAFT_476993 [Arabidopsis lyrata subsp.
lyrata]
Length = 285
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T DE+ F Q+G + + I+ D+ G SKGYGF+TF +
Sbjct: 11 FGDTTYTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKNTGKSKGYGFVTFREADS 70
Query: 97 AKRLQKDSDNIMFKEK-RLNIA 117
A R D + ++ K NIA
Sbjct: 71 ATRAVADPNPVIDGRKANCNIA 92
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGY 86
+ + + PK +++F+GG+ + TEDEL + FS YG V + +I++D + G S+G+
Sbjct: 115 EEMITKDGPK-----TRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGF 169
Query: 87 GFITFDSEEEAKRL 100
GFITF+SE+ +R+
Sbjct: 170 GFITFESEDSVERV 183
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF
Sbjct: 38 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 85
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K+VFVGGI + TTED++ F Q+G V ++ + D+A +G+GF+ FDSE+ RL
Sbjct: 106 KKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRL 163
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 40 TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAK 98
++ P ++FVGG++ TTED L + FS+YG V I+ D +G+GF+TF + +
Sbjct: 8 SIEPGKIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVE 67
Query: 99 RLQKDSDNIMFKEKRLNIAPAIKK 122
+ K+ + + K ++ PA K
Sbjct: 68 EVMKNGPHTL-DNKTIDPKPATMK 90
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+F+ I + TED+ ELF YG + +V I VD R G SKG+ ++ F S ++A + +
Sbjct: 303 RLFLRNILYSATEDDFRELFGTYGSLDEVHIAVDTRTGNSKGFAYVKFTSADDAVKAYLE 362
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGT 128
D +F+ + L+I PA K+ T T
Sbjct: 363 LDKQIFQGRLLHILPAEAKKDHTLT 387
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TED+L F + G+V VK+V +R G S+ + FI + S+++A+ K
Sbjct: 3 RIIVKGLPLYYTEDKLKTHFQKKGVVTDVKLVRNRQGESRRFAFIGYRSQQDAENAVKYF 62
Query: 105 DNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVP 143
D R+++ PA T + P P+P
Sbjct: 63 DKTFIDTARISVQPA-------------KTFSDPTVPLP 88
>gi|149245162|ref|XP_001527115.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449509|gb|EDK43765.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 305
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 38/54 (70%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEA 97
+ VF+ + + TE ++ + F +YGI++ +KI+ DR G S+GYGFI F++E +A
Sbjct: 6 RTVFIARLDYSLTELDVTQHFQKYGIIESIKIIRDREGKSRGYGFIVFENEADA 59
>gi|350404339|ref|XP_003487074.1| PREDICTED: hypothetical protein LOC100741180 [Bombus impatiens]
Length = 647
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Query: 41 VVPKRVFVGGI-TSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
V R+FVG + T T+ EL E FS+YG V + I++G+GF+ F+ E+ A++
Sbjct: 11 TVSSRIFVGHLQTDDMTKVELEEHFSKYGTVVG-------SSINRGFGFVQFEEEQSAQK 63
Query: 100 LQKDSDNIMFKEKRLNIAPAIK 121
++ D MFK +R+++ PA K
Sbjct: 64 AIQNEDGAMFKGRRIDVRPAKK 85
>gi|340716455|ref|XP_003396713.1| PREDICTED: hypothetical protein LOC100643044 [Bombus terrestris]
Length = 646
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Query: 41 VVPKRVFVGGI-TSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
V R+FVG + T T+ EL E FS+YG V + I++G+GF+ F+ E+ A++
Sbjct: 11 TVSSRIFVGHLQTDDMTKVELEEHFSKYGTVVG-------SSINRGFGFVQFEEEQSAQK 63
Query: 100 LQKDSDNIMFKEKRLNIAPAIK 121
++ D MFK +R+++ PA K
Sbjct: 64 AIQNEDGAMFKGRRIDVRPAKK 85
>gi|449469853|ref|XP_004152633.1| PREDICTED: uncharacterized protein LOC101221584 [Cucumis sativus]
Length = 276
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
+N+ P G ++FVGG+ T E+ F Q+G + + I+ D+ G SKGYGF+
Sbjct: 9 LNHPPPFAGDTTWTKLFVGGLAWETQSHEMHSFFQQFGDILEAVIIQDKHTGKSKGYGFV 68
Query: 90 TFDSEEEAKRLQKDSDNIMF-KEKRLNIA 117
TF E A+R + + I+ + NIA
Sbjct: 69 TFKDPESARRACANPNPIICGRRANCNIA 97
>gi|344228071|gb|EGV59957.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 242
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 35 APKYGTVVPKR-VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
+PK V R V+VG + T+T +L E F G+++++ I+ DR GI KGY +I F+
Sbjct: 52 SPKVQEEVDSRSVYVGNVNFTSTPVQLEEFFHSVGVIERITILFDRFTGIPKGYAYIEFN 111
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTG 127
SEE A++ + D +F+ + L + K+ F G
Sbjct: 112 SEEGAQKAISELDGKVFRNRELKV--TAKRTNFPG 144
>gi|383858361|ref|XP_003704670.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Megachile rotundata]
Length = 905
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 15/115 (13%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P+ T+ + F Y ++ N ++FV G+ TTT++EL E+F +G +K+V+I
Sbjct: 736 PNRTRGSGF-KYSCSLEKN----------KLFVKGLPVTTTKEELEEIFKVHGTLKEVRI 784
Query: 76 VVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIA----PAIKKQGFT 126
V R G SKG ++ +D E A + +D + +K +++A P KK T
Sbjct: 785 VTYRNGHSKGLAYVEYDDENSAAKALLATDGMKVSDKVISVAISQPPERKKNPVT 839
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + T+D+L ELFS++G + K++ D G+S+G GF+ F + EEA R + +
Sbjct: 313 LYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTEMN 372
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 373 GKMVVSKPLYVALAQRKE 390
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + L + FS +G + K+ D G S GYGF+ FD+EE AK +
Sbjct: 119 IYIKNLDKAIDNKALHDTFSAFGSILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLN 178
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 179 GMLLNDKQVYVGPFLRKQ 196
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TTTE++L ++F +YG + ++ D G S+ +GF+ F++ ++A + + +
Sbjct: 210 VYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFENPDDAAQSVEALN 269
Query: 106 NIMFKEKRLNIAPAIKK 122
F EK + A KK
Sbjct: 270 GKTFDEKEWYVGKAQKK 286
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
VP ++VG + TE +L +LF+Q+G V +++ D + S GYG++ +++ +A
Sbjct: 27 VPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDA 83
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum
tuberosum]
Length = 178
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V R FVGG+ TT++ L E FSQYG V + KI+ DR G S+G+GF+TF E+
Sbjct: 4 VEYRCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQ 58
>gi|399217460|emb|CCF74347.1| unnamed protein product [Babesia microti strain RI]
Length = 679
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ I + L + FS YG + K+ D G S+GYGF+ FD+E A R D++
Sbjct: 131 VFIKNIDESIDTKALYDAFSPYGQILSCKVATDETGRSRGYGFVHFDTEANATRAISDAN 190
Query: 106 NIMFKEKRLNIAPAIKK 122
+ K++ +AP +++
Sbjct: 191 GMQLGNKKIFVAPFVRR 207
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
Y + N KY V +++ + + + EL ELF +G++ K++VD G S G+
Sbjct: 329 YDSMHAENKSKYQGV---NLYIKNLDDSINDAELRELFEGFGLITSCKVMVDEHGASLGF 385
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
GF+ F S E+A + + K L + A K++ V +P
Sbjct: 386 GFVCFVSPEDATHAVSEMHLKLVHNKPLYVGLAEKREQRLNRLQMRYKVGHNRDGMPMGM 445
Query: 147 MYYHNGLPYTYHNGMAFFPSNGQSMVPT 174
+ H +P H G+ P NGQ M P
Sbjct: 446 LPPHGMMP-PMHMGVPMMPVNGQYMYPN 472
>gi|359486705|ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
Length = 254
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
++N ++G +VFVGG+ T ++ + + F +YG + + I+ D+ G SKGYGF+
Sbjct: 3 MSNAIGQFGDTTLTKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFV 62
Query: 90 TFDSEEEAKRLQKDSDNIMFKEKRLN 115
TF E AK+ +D+ M +R N
Sbjct: 63 TFKEPEAAKKACEDA-TPMINGRRAN 87
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++F+GG+ ++ TEDEL + FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 144 RKIFIGGLPASLTEDELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERV 201
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISK 84
Y A + G ++FVGG+ TTE+ + F +YG + I+ D+ + +
Sbjct: 37 GYGDAGGEDVRGAGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPR 96
Query: 85 GYGFITF 91
G+GF+TF
Sbjct: 97 GFGFVTF 103
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K+V++ GI TED L E F QYG V++V I VD+ G +G+ F+TFD + R+
Sbjct: 118 KKVYISGIKDEHTEDMLREYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVL 177
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ + M KR ++ A+ K+
Sbjct: 178 EKSH-MIDNKRCDVKKALSKE 197
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEE 96
+++F+GGIT T++++L +S++G + V ++ D + S+G+GF+T+ E+
Sbjct: 27 RKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPEQ 80
>gi|403218287|emb|CCK72778.1| hypothetical protein KNAG_0L01580 [Kazachstania naganishii CBS
8797]
Length = 305
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK 98
GT K +FVG + TTE +L E+F +YG V +V++V D++ S+GYGF+ F + +K
Sbjct: 97 GTDPYKTIFVGRLPYDTTELDLQEIFGKYGAVDKVRVVRDKSNKSRGYGFVLFADPQASK 156
Query: 99 RLQKDS 104
R +++
Sbjct: 157 RTMRET 162
>gi|356566044|ref|XP_003551245.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
Length = 207
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
N A ++G +VFVGG+ S T ++ + + F Q+G + + ++ D+A G SKGYGF+TF
Sbjct: 46 NLAGQFGDTTFTKVFVGGLASETQKETMKKYFEQFGEILEAAVITDKATGRSKGYGFVTF 105
Query: 92 DSEEEAKR 99
E A R
Sbjct: 106 HEPEAAMR 113
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + FS+YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 105 VTVKKLFVGGIKEDTEEHHLRDYFSEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 160
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 70
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGY 86
+ + + PK +++F+GG+ + TEDEL + FS YG V + +I++D + G S+G+
Sbjct: 133 EEMITKDGPK-----TRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGF 187
Query: 87 GFITFDSEEEAKRL 100
GFITF+SE+ +R+
Sbjct: 188 GFITFESEDSVERV 201
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKG 85
Y AV + G ++FVGG+ TTE+ + F +YG + I+ D+ + +G
Sbjct: 38 YAVAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRG 97
Query: 86 YGFITF 91
+GF+TF
Sbjct: 98 FGFVTF 103
>gi|357120047|ref|XP_003561742.1| PREDICTED: uncharacterized protein LOC100843530 [Brachypodium
distachyon]
Length = 307
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T +D L E F ++G + + I+ D+ G SKGYGF+TF +
Sbjct: 14 FGDTTLTKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKEADA 73
Query: 97 AKRLQKDSDNIMFKEKRLN 115
AK+ +D ++ +R N
Sbjct: 74 AKKACEDGTPVI-NGRRAN 91
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
++F+GG++ +T E L E FS+YG V +I++DR G S+G+GFIT+ S EEA
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V R FVGG+ TT+ L E FSQYG + + KI+ DR G S+G+GF+TF E+
Sbjct: 6 VEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQ 60
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GG+ T E+ L + FS +G V +VKI++DR G S+G+GF+ F S EEA+ ++
Sbjct: 46 KLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQE 105
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D +++ + A K
Sbjct: 106 MDGRELAGRQIRVDYATDK 124
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+++F+GG+ + TEDEL + FS YG V + +I++D + G S+G+GF+TF+SE+ +R+
Sbjct: 145 RKIFIGGLPPSLTEDELKDHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERV 202
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++FVGG+ TTE+ + F +YG + I+ D+ + +G+GF+TF
Sbjct: 57 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 104
>gi|255075053|ref|XP_002501201.1| predicted protein [Micromonas sp. RCC299]
gi|226516465|gb|ACO62459.1| predicted protein [Micromonas sp. RCC299]
Length = 753
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQK 102
++VFVGG+ TTE ++ FS YG + VK+V+D R G+SK +GFITF A+ L+
Sbjct: 265 RQVFVGGLPRLTTESDMFRFFSCYGQIDDVKLVLDPRTGMSKRFGFITFADVANAEELKA 324
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYD 130
K +N+ K QG + D
Sbjct: 325 KKVVNFGKGFMVNVGSVKKNQGAAASND 352
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIV---VDRAGISK---------GYGFIT 90
PK VF+GG+ E ++ EL S++G V+ V ++ ++G K G+ F+
Sbjct: 42 PKTVFLGGVPQDLDEPKIAELMSRFGSVEHVHLMRHTRKKSGEKKSDDFHPSHRGFCFVR 101
Query: 91 FDSEEEA-KRLQKDSDNIMFKEKRLNIAPAIK 121
F +EEEA K L+ + + E + I A K
Sbjct: 102 FGTEEEAVKALEAGTLSAGEGESAMRIGEAEK 133
>gi|212274507|ref|NP_001130852.1| uncharacterized protein LOC100191956 [Zea mays]
gi|194690272|gb|ACF79220.1| unknown [Zea mays]
gi|195616000|gb|ACG29830.1| hypothetical protein [Zea mays]
gi|414866249|tpg|DAA44806.1| TPA: hypothetical protein ZEAMMB73_243908 [Zea mays]
Length = 212
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T +D L E F +YG + + I+ D+ G SKGYGF+TF +
Sbjct: 20 FGDTTLTKVFVGGLAWETHKDALREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADA 79
Query: 97 AKRLQKDSDNIM 108
AK+ +D+ ++
Sbjct: 80 AKKACEDATPVI 91
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|356515780|ref|XP_003526576.1| PREDICTED: protein boule-like [Glycine max]
Length = 287
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 30 AVNNNAPKY----GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISK 84
A+ ++ P Y G ++FVGG+ T +E+ + F Q+G + + I+ D+ G SK
Sbjct: 20 AMAHHHPHYRSPFGDTTFTKLFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKNTGKSK 79
Query: 85 GYGFITFDSEEEAKRLQKDSDNIM-FKEKRLNIA 117
GYGF+TF +E A+R D + I+ + NIA
Sbjct: 80 GYGFVTFCGQESARRACADPNPIIDGRRANCNIA 113
>gi|363807832|ref|NP_001242695.1| uncharacterized protein LOC100811977 [Glycine max]
gi|255644898|gb|ACU22949.1| unknown [Glycine max]
Length = 287
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEE 96
+G ++FVGG+ T +E+ + F Q+G + + I+ D++ G SKGYGF+TF +E
Sbjct: 32 FGDTTFTKLFVGGLAWETPTEEMRKYFEQFGNILEAVIITDKSTGKSKGYGFVTFCDQES 91
Query: 97 AKRLQKDSDNIM-FKEKRLNIA 117
A+R D + I+ + NIA
Sbjct: 92 ARRACADPNPIIDGRRANCNIA 113
>gi|42572157|ref|NP_974169.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110736924|dbj|BAF00419.1| hypothetical protein [Arabidopsis thaliana]
gi|332197967|gb|AEE36088.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 271
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T DE+ F Q+G + + I+ D+ G SKGYGF+TF +
Sbjct: 11 FGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDS 70
Query: 97 AKRLQKDSDNIMFKEK-RLNIA 117
A R D + ++ K NIA
Sbjct: 71 ATRAVADPNPVIDGRKANCNIA 92
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ +T + L E F++YG V VK+++DR G S+G+GFITF + E+A +
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQG 100
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D +R+ + A ++
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 141 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 199
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 200 GYGFITFSDSECAKK 214
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
NA ++ + ++FVGG++ T + L E FS +G V + +++ DR G S+G+GF+ F
Sbjct: 30 NAARF---MSNKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFS 86
Query: 93 SEEEAKRLQK--DSDNIMFKEKRLNIA 117
+EE+AK+ D + + R+N A
Sbjct: 87 NEEDAKKAASSMDGQELDGRSVRVNFA 113
>gi|449447713|ref|XP_004141612.1| PREDICTED: uncharacterized protein LOC101221767 [Cucumis sativus]
Length = 274
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFIT 90
+N A ++G +VFVGG+ T +D + + F Q+G + + ++ D+A G SKGYGF+T
Sbjct: 4 SNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVT 63
Query: 91 FDSEEEAKRLQKDSDNIMFKEKRLN 115
F + A R D+ ++ +R N
Sbjct: 64 FREPDAAMRACVDASPVI-DGRRAN 87
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ VD +G SKGYGF+ +DSEE A++ + +
Sbjct: 117 IFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLN 176
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++K
Sbjct: 177 GMLLNDKQVYVGPFVRKH 194
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + ++++L ELFS YG + K++ D +G+SKG GF+ F + EEA R + +
Sbjct: 311 LYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMN 370
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 371 GKMVVSKPLYVALAQRKE 388
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +T E+EL ++F ++G + V ++ D G S+ +GF+ F++ E+A R + +
Sbjct: 208 VFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALN 267
Query: 106 NIMFKEKRLNIAPAIKK 122
K + A KK
Sbjct: 268 GYKLDNKDWFVGRAQKK 284
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ + TTE L + FS+YG + +V ++ DR S+G+ F+TF+S +AK
Sbjct: 7 PGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAA 66
Query: 102 KDSDNIMFKEKRLNIAPAIKKQ 123
++ + K + + A K Q
Sbjct: 67 REMNGKSLDGKNIKVEQATKPQ 88
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + T +++L ELFS++G + K++ D +GIS+G GF+ F + EEA R + +
Sbjct: 322 LYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMN 381
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 382 GKMIVSKPLYVALAQRKE 399
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+ V+V ++ +TT+DEL ++F ++G + ++ D G SK +GFI F++ E+A + +
Sbjct: 217 QNVYVKNLSESTTDDELKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVES 276
Query: 104 SDNIMFKEKRLNIAPAIKK 122
+ F +K + A KK
Sbjct: 277 LNGKKFDDKEWYVGKAQKK 295
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + FS +G + KI D G SKGYGF+ +D+EE A+ +
Sbjct: 128 IFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLN 187
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++KQ
Sbjct: 188 GMLMNDKQVYVGHFLRKQ 205
>gi|313231345|emb|CBY08460.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
K++FVGG++++T + +L FS+YG V++ ++ DR +G+GF+TFDSE+ + +
Sbjct: 14 KKIFVGGLSASTVQADLTAYFSKYGKVEEAMLMFDRQTNRHRGFGFVTFDSEDAVENV 71
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + ++ L + FS+YG + K++ D GISKG+GF+ F S EEA R +++
Sbjct: 321 LYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETN 380
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+M K + +A A +K+
Sbjct: 381 GLMINGKPIYVAMAQRKE 398
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + E+E+ E FS +G++ V I+ D SKG+GF+ FD E A+ + +
Sbjct: 218 VFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETMN 277
Query: 106 NIMFKEKRLNIAPAIKK 122
N + + + A KK
Sbjct: 278 NSQLGSRTIYVGRAQKK 294
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR 99
++VG + T E +L +FSQ G+V V++ D S GYG++ + S +A R
Sbjct: 40 LYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVR 94
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 30 AVNNNAPKYGTVVPKR-VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGF 88
A N K+ T + K +FV + E E+ ELFS++G+VKQV++V +RAG KGYG+
Sbjct: 679 AKNPTTFKFPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGY 738
Query: 89 ITFDSEEEAKRLQKDSDNIMFKEKRLNIA 117
+ ++ E A D K + +++A
Sbjct: 739 VEYEQESSASTAVLTLDKTEVKGRTISVA 767
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK-RLQ 101
P++VF+ + + TED L + FS+ G V V+IV + AG SKGY ++ F++E + L
Sbjct: 600 PRKVFISNLLFSITEDHLRDKFSKLGEVLDVRIVKNMAGRSKGYAYVEFNNESTVQAALA 659
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPT 134
D + + + + + I+P + K T+ PT
Sbjct: 660 MDREKM--EGRPMFISPCVDKAKNPTTF-KFPT 689
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ A KY + +++ + T ++++L E+F+ YG + K++ D GIS+G
Sbjct: 303 FEQSIKEAADKYPGL---NLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGS 359
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
GF+ F + EEA R + + MF K L +A A +K+
Sbjct: 360 GFVAFSTPEEATRALGEMNGKMFAGKPLYVALAQRKE 396
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G++ KI D +G+SKGYGF+ FD+EE A+ +
Sbjct: 125 IFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDNEEAAQNAIDKLN 184
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++KQ
Sbjct: 185 GMLINDKQVYVGHFLRKQ 202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ +TT++EL F +YG + I+ D G S+ +GF+ F++ ++A + + +
Sbjct: 216 VYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPDDAAKAVEGLN 275
Query: 106 NIMFKEKRLNIAPAIKK----QGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
F +K + A KK Q G ++ ++ P N+Y N
Sbjct: 276 GKKFDDKEWYVGKAQKKSEREQELKGRFEQ--SIKEAADKYPGLNLYLKN 323
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 17/102 (16%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITF 91
NNA ++ V ++VG + + +L +LF+Q G V V++ D S GYG++ F
Sbjct: 27 NNANQF---VTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNF 83
Query: 92 DSEEEAKR---------LQKDSDNIMFKEKRLNIAPAIKKQG 124
+ ++A R L S IM+ + P+++K G
Sbjct: 84 SNPQDAARALDVLNFTPLNNRSIRIMYSHRD----PSLRKSG 121
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI + E E FSQYG + ++++D+ G S+G+GF+T+DS + R+ +
Sbjct: 179 KIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQ- 237
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTY 129
S I FK K++ I A + G Y
Sbjct: 238 SKYIEFKGKQIEIKRAQPRHLQKGQY 263
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFD---SEEEAKRL 100
++F+GG+ TTE+ L + F++YG V +KI+ D G S+G+GF+TF+ S +E +
Sbjct: 95 KMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVKT 154
Query: 101 QKDSDNIMFKEKR 113
Q D + KR
Sbjct: 155 QHILDGKVIDPKR 167
>gi|320582907|gb|EFW97124.1| RNA recognition motif-containing protein [Ogataea parapolymorpha
DL-1]
Length = 712
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV I T++EL E FSQY V+ IV D G S+G+GF++F ++E+A K++
Sbjct: 19 LFVQSIPVEATKEELNEFFSQYAPVRHSVIVTDTEGKSRGFGFVSFVTDEDALSALKETK 78
Query: 106 NIMFKEKRLNIAPAIKKQ 123
FK K L ++ A ++Q
Sbjct: 79 KAKFKNKLLRVSIAKRRQ 96
>gi|336370109|gb|EGN98450.1| hypothetical protein SERLA73DRAFT_169409 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382879|gb|EGO24029.1| hypothetical protein SERLADRAFT_450319 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1027
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K ++V G++ TT D+L +LF YG++K+V++ D++G KG+ FI F+ +E +
Sbjct: 784 KEIYVAGLSKFTTSDDLEKLFKTYGVIKEVRMAEDKSGHCKGFAFIEFE-QEADAQAALA 842
Query: 104 SDNIMFKEKRLNIAPA 119
++N K++R+ + A
Sbjct: 843 ANNYELKKRRMAVTLA 858
>gi|15217975|ref|NP_176143.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|12321044|gb|AAG50640.1|AC082643_4 RNA binding protein [Arabidopsis thaliana]
gi|15450912|gb|AAK96727.1| RNA binding protein [Arabidopsis thaliana]
gi|17978725|gb|AAL47356.1| RNA binding protein [Arabidopsis thaliana]
gi|18181938|dbj|BAB83876.1| RNA binding protein [Arabidopsis thaliana]
gi|332195431|gb|AEE33552.1| RNA-binding protein 1 [Arabidopsis thaliana]
Length = 360
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 12/114 (10%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS---KGYGFITFDSEEEAKRL 100
K++FVGG++S TTE+E F ++G + +VV G++ +G+GF+T+DSE+ + +
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFG--RTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVV 177
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGF---TGTYDSLPTVTS---PVPPVPTSNMY 148
+ S+ +KR+ + AI K+G G ++P S P VP N Y
Sbjct: 178 MQ-SNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATPYVPEQNGY 230
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGGI T+E+ L + FS+YG V + + ++ G +G+GF+ F ++ + + +D
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ I+ K +++ AI+K
Sbjct: 67 THFIL--GKPVDVRKAIRKH 84
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 289 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 347
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 348 GYGFITFSDSECAKK 362
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L ELFS +G + K++ D +GIS+G GF+ F + EEA R + +
Sbjct: 314 LYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELN 373
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
M K L +APA +K+ + + PV P+
Sbjct: 374 GKMVVSKPLYVAPAQRKEERRARLQAQFSQMRPVAMAPS 412
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L + FS +G + K+ D +G SKGYGF+ FDSEE A+ +
Sbjct: 121 IFIKNLDKTIDHKALHDTFSSFGNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLN 180
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++KQ
Sbjct: 181 GMLINDKQVYVGNFLRKQ 198
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + +TT+++L +F ++G + ++ D G SK +GF+ F++ ++A + + +
Sbjct: 212 IYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVDDAAKAVEALN 271
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 272 GKKFDDKEWYVGKAQKK 288
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR- 99
VP ++VG + T+ +L +LF+Q G V V++ D + S GYG++ + + ++A R
Sbjct: 29 VPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARA 88
Query: 100 --------LQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
L IM+ + P+I+K G +
Sbjct: 89 LDVLNFTPLNNKPLRIMYSHRD----PSIRKSGMANIF 122
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|327289491|ref|XP_003229458.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Anolis carolinensis]
Length = 905
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
KY T + K ++F+ G+ + T++EL EL +G VK+V++V +RAG SKG ++ F++E
Sbjct: 741 KYSTALEKHKLFIAGLPFSYTKEELEELCKAHGTVKEVRLVTNRAGRSKGMAYVEFENEA 800
Query: 96 EAKRLQKDSDNIMFKEKRLNIA---PAIKKQ 123
+A + D + + + +A P +KQ
Sbjct: 801 QASQAVLKMDGLAVNDYVIKVAISNPPARKQ 831
>gi|297840659|ref|XP_002888211.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297334052|gb|EFH64470.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 359
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 13/115 (11%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS---KGYGFITFDSEEEAKRL 100
K++FVGG++S TT++E F ++G + + +VV G++ +G+GF+T+DSE+ + +
Sbjct: 120 KKIFVGGLSSNTTQEEFKSYFERFG--RTIDVVVMHDGVTNKPRGFGFVTYDSEDSVEFV 177
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSL-----PTVTS--PVPPVPTSNMY 148
+ S+ +KR+ + AI K+G ++ PT +S P VP N Y
Sbjct: 178 MQ-SNFHELSDKRVEVKRAIPKEGIQSNNGNVNVNVPPTYSSFQATPYVPEQNGY 231
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGGI T+E++L + FS+YG+V + D+ GIS+G+GF+ F ++ + +
Sbjct: 7 KLFVGGIGKETSEEDLKQYFSRYGLVLGAVVAKDKVTGISRGFGFVRFANDYDVVKALSG 66
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ I+ K +++ A +K
Sbjct: 67 THFIL--GKPVDVRKAFRKH 84
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
+Y + +++ + + +L ELFS++G + K+++D G+SKG GF+ F + EE
Sbjct: 321 RYERLKAANLYLKNLDDNINDVKLKELFSEFGSITSCKVMLDHQGVSKGSGFVAFSTPEE 380
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP--VPPVPTSNMYYHNGL 153
A R K+ + M K L +A A +K+ + V +P + P+P+ Y+ G
Sbjct: 381 ASRALKEMNGKMIGRKPLYVAIAQRKEERKARLQAHFALVRAPGALAPLPSGIPGYNAGA 440
Query: 154 P 154
P
Sbjct: 441 P 441
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ST L E F+ +G V K+ VD G SKGYGF+ F++EE A+R D
Sbjct: 135 VFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDSNGQSKGYGFVQFENEESAERAISFLD 194
Query: 106 NIMFKEKRLNIAPAIKKQGFTGT 128
+ +K++ + +++Q T T
Sbjct: 195 GMCLNDKQVYVGFFVRQQERTRT 217
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF- 91
N +PK+ V+V ++ T T ++L ++F YG + ++ D+ G S+G+GF+ F
Sbjct: 218 NGSPKF-----TNVYVKNLSETITNEDLEKVFGVYGTITSALVMKDQTGKSRGFGFVNFQ 272
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
D + A ++K + +K + A +K
Sbjct: 273 DPDSAAAAVEKLNGTTAHDDKAWYVGRAQRK 303
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISK-GYGFITFDSEEEAKRLQKDS 104
++VG + E++L +LFSQ V V++ D+ S GYG++ F + ++A K
Sbjct: 47 LYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMKAL 106
Query: 105 D---------NIMFKEKRLNIAPAIKKQGFTGTY 129
+ IMF + P+I+K G+ +
Sbjct: 107 NFTPLNGKPIRIMFSHR----DPSIRKSGYGNVF 136
>gi|209875917|ref|XP_002139401.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555007|gb|EEA05052.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 395
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 29 AAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYG 87
A NNN+ GT ++FVGG+ + T+++L E F +YG++K + ++VDR +G+G
Sbjct: 118 AVTNNNSS--GTFNATKIFVGGLPQSCTDEKLREHFGKYGMIKNLSVMVDRDTNRHRGFG 175
Query: 88 FITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS 131
F+ ++S E + + + + K + A+ ++ G +S
Sbjct: 176 FVEYESPESVEEVMRHYYDHQIDNKWVECKKALPREIMAGGANS 219
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYG-IVKQVKIVVDRAGISKGYGFITFDSEE 95
G VP ++F GG++ TT L FS YG IV V + G S+G+GFITF SEE
Sbjct: 9 GPTVPAKIFCGGLSDVTTNTSLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEE 66
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
++FVGGI + TE++ + FSQ+G + ++++D+ G S+G+GF+T+DS + R+
Sbjct: 238 KIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDRV 294
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
++F+GG+ TTE+ L F Q+G + + I+ D A G S+G+GF+TF
Sbjct: 154 KMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTF 201
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + T +++L ELFS++G + K++ D +GIS+G GF+ F + EEA R + +
Sbjct: 144 LYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMN 203
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 204 GKMIVSKPLYVALAQRKE 221
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+ V+V ++ +TT+D L ++F ++G + ++ D G SK +GFI F++ E+A + +
Sbjct: 39 QNVYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVES 98
Query: 104 SDNIMFKEKRLNIAPAIKK 122
+ F +K + A KK
Sbjct: 99 LNGKKFDDKEWYVGKAQKK 117
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+FV + T EDEL E FS++G + QV +VVD+ SKG +I + E A R ++
Sbjct: 264 RLFVRNLPYTAIEDELEEHFSKFGNISQVHLVVDKDTKRSKGLAYIHYTLPESAARALEE 323
Query: 104 SDNIMFKEKRLNIAPAIKK 122
DN +F+ + L++ PA +K
Sbjct: 324 LDNSIFQGRLLHVMPAKQK 342
>gi|320587701|gb|EFX00176.1| ribosome biogenesis protein [Grosmannia clavigera kw1407]
Length = 822
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQK 102
+ VFV + ST T ++L E FS++ VK +V D + S+GYGF+TF E+AK ++
Sbjct: 46 RSVFVRSLPSTATSEKLTEFFSEHFPVKHATVVTDPKTKESRGYGFVTFTDAEDAKAAKE 105
Query: 103 DSDNIMFKEKRLNI 116
DN +F +RL +
Sbjct: 106 KLDNGLFDGRRLRL 119
>gi|255553947|ref|XP_002518014.1| RNA binding protein, putative [Ricinus communis]
gi|223542996|gb|EEF44532.1| RNA binding protein, putative [Ricinus communis]
Length = 267
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T ++ L F Q+G + + ++ D+ G SKGYGF+TF E
Sbjct: 13 FGDTTYTKVFVGGLAWETHKETLKNYFQQFGEILEAVVIFDKNTGRSKGYGFVTFKEAEA 72
Query: 97 AKRLQKDSDNIMFKEKRLN 115
A+R DS ++ +R N
Sbjct: 73 ARRACVDSSPVI-DGRRAN 90
>gi|21593674|gb|AAM65641.1| unknown [Arabidopsis thaliana]
gi|88900324|gb|ABD57474.1| At1g22330 [Arabidopsis thaliana]
Length = 146
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEE 96
+G +VFVGG+ T DE+ F Q+G + + I+ D+A G SKGYGF+TF +
Sbjct: 11 FGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDS 70
Query: 97 AKRLQKDSDNIMFKEK-RLNIA 117
A R D + ++ K NIA
Sbjct: 71 ATRAVADPNPVIDGRKANCNIA 92
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
K++FVGGI T ED L E F QYG ++ ++I+ DR +G +G+ F+TF+ + ++
Sbjct: 105 KKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEE 96
+++F+GG++ TT++ L E F Q+G + ++ D + S+G+GF+T+ S +E
Sbjct: 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
>gi|6566348|dbj|BAA88269.1| RNA binding protein [Arabidopsis thaliana]
Length = 381
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 12/114 (10%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS---KGYGFITFDSEEEAKRL 100
K++FVGG++S TTE+E F ++G + +VV G++ +G+GF+T+DSE+ + +
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFG--RTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVV 177
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGF---TGTYDSLPTVTS---PVPPVPTSNMY 148
+ S+ +KR+ + AI K+G G ++P S P VP N Y
Sbjct: 178 MQ-SNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATPYVPEQNGY 230
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGGI T+E+ L + FS+YG V + + ++ G +G+GF+ F ++ + + +D
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ I+ K +++ AI+K
Sbjct: 67 THFIL--GKPVDVRKAIRKH 84
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 282 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 340
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 341 GYGFITFSDSECAKK 355
>gi|331219745|ref|XP_003322549.1| hypothetical protein PGTG_04086 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 680
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +++ ++ ED+L +LFSQ+G +K V++V+D+AG SKG+ F+ F +E AK
Sbjct: 412 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAK-AALS 470
Query: 104 SDNIMFKEKRLNI 116
+N+ K++R+ +
Sbjct: 471 MNNVELKKRRIGV 483
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ + TTE L + FS+YG + +V ++ DR S+G+ F+TF+S +AK
Sbjct: 7 PGKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAA 66
Query: 102 KDSDNIMFKEKRLNIAPAIKKQ 123
++ + K + + A K Q
Sbjct: 67 REMNGKSLDGKNIKVEQATKPQ 88
>gi|343455562|gb|AEM36348.1| At1g58470 [Arabidopsis thaliana]
Length = 360
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS---KGYGFITFDSEEEAKRL 100
K++FVGG++S TTE+E F ++G + +VV G++ +G+GF+T+DSE+ + +
Sbjct: 120 KKIFVGGLSSNTTEEEFKSYFERFG--RTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVV 177
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQG 124
+ S+ +KR+ + AI K+G
Sbjct: 178 MQ-SNFHELSDKRVEVKRAIPKEG 200
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGGI T+E+ L + FS+YG V + + ++ G +G+GF+ F ++ + + +D
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ I+ K +++ AI+K
Sbjct: 67 THFIL--GKPVDVRKAIRKH 84
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G SKGYGF+ FDSEE A++ + +
Sbjct: 115 IFIKNLDKAIDHKALHDTFSAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLN 174
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 175 GMLLNDKQVYVGPFLRKQ 192
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ TTTE++L + F ++G + + ++ D G SK +GF+ F++ E+A + + +
Sbjct: 206 VFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAEDAAKAVEALN 265
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 266 GKKIDDKEWFVGKAQKK 282
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L ELFS +G + K++ D GIS+G GF+ F + EEA R + +
Sbjct: 309 LYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
+ K L +A A +K+ + + PV P+
Sbjct: 369 GKIVVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPS 407
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + ++ T+ +L +LF+Q G V V++ D + S GYG++ + + ++A R
Sbjct: 27 LYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAAR 81
>gi|339501181|ref|YP_004699216.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835530|gb|AEJ20708.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 96
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ K+++VG ++ T ED L LF+ YG V+ VKI+ DR G SKG+GF+ ++ EA+
Sbjct: 1 MAKKLYVGNLSYNTFEDSLRNLFASYGNVESVKIITDRDTGYSKGFGFVEMSTDAEAQAA 60
Query: 101 QKDSDNIMFKEKRLNIAPAIKK 122
++ F +RL + A+ K
Sbjct: 61 IAATNGFEFDGRRLKVNEAMDK 82
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 266 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 324
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 325 GYGFITFSDSECAKK 339
>gi|296485782|tpg|DAA27897.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 360
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 28 QAAVNNNAPKYGTVVP-KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKG 85
+A + K G++V K++FVGGI T E L E F +YG + ++I+ DR +G +G
Sbjct: 103 RAVSREKSEKQGSLVNVKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGKKRG 162
Query: 86 YGFITFDS 93
+GF+TFD
Sbjct: 163 FGFVTFDD 170
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++S TTE+ L + Q+G + ++ A S+G+GF+TF S
Sbjct: 29 RKLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSS 79
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+FVG + + T+ L E F + Y VK K+V++R G +KGYGF+ F E E R +
Sbjct: 156 IFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQIRAMTE 215
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDS 131
+ + + + I PA K+G TG DS
Sbjct: 216 MNGVPCSTRPMRIGPAASKKGVTGQRDS 243
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE---EEAKRL 100
VFVGG+ ++ T+D L +FSQYG + VKI K GF+ F + EEA R+
Sbjct: 262 VFVGGLDASVTDDHLKNVFSQYGEIVHVKIPA-----GKRCGFVQFSEKSCAEEALRM 314
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TTTED+L ++F ++GI+ ++ D G SK +GF+ FD ++A R + +
Sbjct: 221 VYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEALN 280
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 281 GKKFDDKEWYVGKAQKK 297
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + FS +G + K+ D G S+GYGF+ FD+EE AK +
Sbjct: 130 IFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLN 189
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K++ + P ++KQ T D
Sbjct: 190 GMLLNDKQVFVGPFLRKQERESTAD 214
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + ++D+L ELFS++G + K++ D GIS+G GF+ F + EEA + + +
Sbjct: 324 LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMN 383
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 384 GKMVVSKPLYVALAQRKE 401
>gi|308491360|ref|XP_003107871.1| hypothetical protein CRE_12786 [Caenorhabditis remanei]
gi|308249818|gb|EFO93770.1| hypothetical protein CRE_12786 [Caenorhabditis remanei]
Length = 862
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
K+ T + K ++FV + T+DE+ LFS++G V V+ V R G KG F+ F+SE
Sbjct: 689 KFSTGLEKSKLFVRNVHFEATDDEILALFSKFGTVTSVRRVTHRDGKPKGVAFVDFESES 748
Query: 96 EAKRLQKDSDNIMFKEKRLNIA---PAIKKQ 123
A++ D ++ +E+ + +A P KK+
Sbjct: 749 SAQKCVASGDKLILREREIEVAISNPPSKKE 779
>gi|328354024|emb|CCA40421.1| Multiple RNA-binding domain-containing protein 1 [Komagataella
pastoris CBS 7435]
Length = 834
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+FV I+ T TE E +LFS YG + +V + +D R G SKG+ ++ F E+A K
Sbjct: 310 RLFVRNISYTATEAEFRQLFSTYGELDEVHVAIDTRTGASKGFVYVKFQDPEQALEAYKS 369
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
D +F+ + L+I PA K+
Sbjct: 370 LDKQIFQGRLLHILPAQPKK 389
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TED+L FS+ G V VK++ +R G S+ + FI + + E+A++
Sbjct: 3 RLIVKGLPKYYTEDKLKAYFSKQGDVSDVKLMKNRFGESRRFAFIGYKNAEDAEKAASYY 62
Query: 105 DNIMFKEKRLNIAPAI 120
++ R+++ A+
Sbjct: 63 NDSFIDTARISVELAV 78
>gi|443696487|gb|ELT97181.1| hypothetical protein CAPTEDRAFT_153918 [Capitella teleta]
Length = 230
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 31/157 (19%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ TT++ L E F Q+G +++ ++ DR G S+GYGF+T A+R K+
Sbjct: 15 KIFVGGLPYHTTDESLREFFQQFGDIEEAVVITDRGTGKSRGYGFVTMTDRTAAERACKE 74
Query: 104 SDNIMFKEK------------RLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
+ I+ K R+ P K G G + V +P
Sbjct: 75 PNPIIDGRKANVNLAYLGAKPRIQSLPFAIKAGIPGGF-----VAGQIP----------- 118
Query: 152 GLPYTYHNGMAFFPSNGQSMVPTSP--PTVPTQVKIL 186
GLP + A+ S G +P SP P PT L
Sbjct: 119 GLPQFVYPSAAYMSSPGGVAMPVSPHSPLSPTTAGAL 155
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
V R FVGG+ TT+ L E FSQYG V + KI+ DR G S+G+GF+TF E+ K
Sbjct: 6 VEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMK 63
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 14/87 (16%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRLQK 102
K++FVGG+ S TED+ + F Q+G + V ++ D A +G+GFITFD+EE
Sbjct: 104 KKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVMYDHATQRPRGFGFITFDTEEAV----- 158
Query: 103 DSDNIM------FKEKRLNIAPAIKKQ 123
DN++ KEK + + A+ K+
Sbjct: 159 --DNVLHKTFHELKEKMVEVKRAVPKE 183
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GGI+ TTE++L + F YG V + I+ DR G ++G+GF+ F A R+ D
Sbjct: 7 KLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVLLD 66
Query: 104 SDNI 107
I
Sbjct: 67 KHTI 70
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +F+ + T TE +L F YG +++V+IV D+ G S+GY F+ ++ E + K K+
Sbjct: 109 KTLFISRLHKTATETDLRREFEGYGTIERVRIVRDKKGRSRGYAFVVYERERDMKAAYKE 168
Query: 104 SDNIMFKEKRL 114
SD + KR+
Sbjct: 169 SDGLHIMGKRI 179
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L ELFS++G + K+++D G+SKG GF+ F + EEA R +
Sbjct: 324 LYLKNLDDSVNDEKLXELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMN 383
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP--VPPVPTSNMYYHNGLPYTYHNGMA 162
M K L +A A +K+ + + SP + P+ + +H+G P +
Sbjct: 384 GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQL- 442
Query: 163 FFPSNGQSMVPTSPPTVPTQVKIL--LPPGV 191
+F ++PT P Q +++ + PGV
Sbjct: 443 YFGQGTPGLIPTQPAGYGFQQQLMPGMRPGV 473
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L + F+ +G V KI +D G SKGYGF+ F+ EE A+ K +
Sbjct: 129 VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLN 188
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++ Q
Sbjct: 189 GMLINDKQVYVGLFVRHQ 206
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
N +PK+ V+V ++ TTT+D+L +F +YG + ++ D +G+SK +GF+ F
Sbjct: 212 NGSPKF-----TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQ 266
Query: 93 SEEEAKRLQKDSDNIMFKEKRL 114
S + A + + F + ++
Sbjct: 267 SSDSAAAAVEHLNGATFNDDKV 288
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 310 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 368
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 369 GYGFITFSDSECAKK 383
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
K++FVGGI T ED L E F QYG ++ ++I+ DR +G +G+ F+TF+ + ++
Sbjct: 105 KKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEE 96
+++F+GG++ TT++ L E F Q+G + ++ D + S+G+GF+T+ S +E
Sbjct: 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGY 86
+ + + PK +++F+GG+ + TEDEL + FS YG V + +I++D + G S+G+
Sbjct: 192 EEMITKDGPK-----TRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGF 246
Query: 87 GFITFDSEEEAKRL 100
GFITF+SE+ +R+
Sbjct: 247 GFITFESEDSVERV 260
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISK 84
Y AV + G ++FVGG+ TTE+ + F +YG + I+ D+ + +
Sbjct: 96 GYAVAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPR 155
Query: 85 GYGFITF 91
G+GF+TF
Sbjct: 156 GFGFVTF 162
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G SKGYGF+ FD+EE A++ + +
Sbjct: 121 IFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLN 180
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 181 GMLLNDKQVYVGPFLRKQ 198
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+DEL F ++G + ++ D G SK +GF+ F++ ++A R + +
Sbjct: 212 VFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKSKCFGFVNFENADDAARAVEALN 271
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 272 GKNFDDKEWYVGKAQKK 288
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 17 SSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIV 76
S +N ++ ++ A KY ++V + + +++L ELFS +G + K++
Sbjct: 289 SERENELKQRFEQSMKEAADKYQGA---NLYVKNLDDSIGDEKLKELFSPFGTITSCKVM 345
Query: 77 VDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
D G+S+G GF+ F + EEA R + + M K L + A +K+
Sbjct: 346 RDPNGLSRGSGFVAFSTPEEASRALLEMNGKMVVSKPLYVTLAQRKE 392
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + T+ +L +LF+Q G V V++ D + S GYG++ F + ++A R
Sbjct: 33 LYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAAR 87
>gi|294955087|ref|XP_002788400.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
gi|239903800|gb|EER20196.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
Length = 877
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +FV + TTE +L +F +YG +++V I+ D G S+GY FI +D+E K+ K+
Sbjct: 101 KTLFVARVAYETTEKQLQRIFGEYGPIRKVTIIHDLEGRSRGYAFIEYDNENSLKQAYKN 160
Query: 104 SDNIMFKEKRL 114
+D I +R+
Sbjct: 161 ADGIKVDGRRV 171
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + L + FS +G + K+ VD +G SK YGF+ +++EE A+ + +
Sbjct: 117 IFVKNLDKSIDTKSLYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVN 176
Query: 106 NIMFKEKRLNIAPAIKKQG------FTGTY 129
++ KR+ +AP ++KQ FT Y
Sbjct: 177 GMLIGGKRVEVAPFLRKQDRESEEVFTNLY 206
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
V +++ + + ++ L ELF +G + K+++D S+G+GF+ F + +EA +
Sbjct: 304 VTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATK 361
>gi|254574096|ref|XP_002494157.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
gi|238033956|emb|CAY71978.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
Length = 810
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+FV I+ T TE E +LFS YG + +V + +D R G SKG+ ++ F E+A K
Sbjct: 286 RLFVRNISYTATEAEFRQLFSTYGELDEVHVAIDTRTGASKGFVYVKFQDPEQALEAYKS 345
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
D +F+ + L+I PA K+
Sbjct: 346 LDKQIFQGRLLHILPAQPKK 365
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TED+L FS+ G V VK++ +R G S+ + FI + + E+A++
Sbjct: 3 RLIVKGLPKYYTEDKLKAYFSKQGDVSDVKLMKNRFGESRRFAFIGYKNAEDAEKAASYY 62
Query: 105 DNIMFKEKRLNIAPAI 120
++ R+++ A+
Sbjct: 63 NDSFIDTARISVELAV 78
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 200 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 258
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 259 GYGFITFSDSECAKK 273
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 209 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 267
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 268 GYGFITFSDSECAKK 282
>gi|147900728|ref|NP_001081282.1| heterogeneous nuclear ribonucleoproteins A1 homolog [Xenopus
laevis]
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis]
Length = 365
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
K++FVGGI T ED L E F QYG ++ ++I+ DR +G +G+ F+TF+ + ++
Sbjct: 105 KKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEE 96
+++F+GG++ TT++ L E F Q+G + ++ D + S+G+GF+T+ S +E
Sbjct: 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 134 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 192
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 193 GYGFITFSDSECAKK 207
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 132 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 190
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 191 GYGFITFSDSECAKK 205
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 224 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 282
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 283 GYGFITFSDSECAKK 297
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|307719265|ref|YP_003874797.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|386347364|ref|YP_006045613.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|306532990|gb|ADN02524.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|339412331|gb|AEJ61896.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
+++ G + TTED L +LF QYG V+ VKI+ DR +G SKG+GF+ SEE
Sbjct: 4 KIYAGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEE 55
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + ++ L + FS+YG + K++ D GISKG+GF+ F S EEA R +++
Sbjct: 320 LYVKNLDDSIDDETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETN 379
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+M K + +A A +K+
Sbjct: 380 GLMINGKPIYVAMAQRKE 397
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + E+E+ E FS +G++ V I+ D SKG+GF+ FD E A+ + +
Sbjct: 217 VFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETMN 276
Query: 106 NIMFKEKRLNIAPAIKK 122
N + + + A KK
Sbjct: 277 NSQLGSRTIYVGRAQKK 293
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR 99
++VG + T E +L +FSQ G+V V++ D S GYG++ + S +A R
Sbjct: 39 LYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVR 93
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|313243959|emb|CBY14841.1| unnamed protein product [Oikopleura dioica]
Length = 457
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVV-DRAGISKGYGFITFDSEEEAKRLQKD 103
++FVG + TE+++ +F ++G V+ ++I +RA G+GF+TF SEE K +
Sbjct: 318 QIFVGALPRNMTEEDINGVFEEFGEVQHIRINQGNRADSKNGFGFVTFKSEESVKNALEK 377
Query: 104 SDNIMFKEKRLNI 116
NIMF +LNI
Sbjct: 378 KHNIMFNGYQLNI 390
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K++FVGG+ S TEDE + F YG+V V ++ D+ +G+GFITFD+E+ R+
Sbjct: 128 KKIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFDAEDAVDRV 185
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
++F+GGI+ TTE++L + F+ YG V Q ++ D+ G +G+GF+ F
Sbjct: 7 KLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVF 54
>gi|357119407|ref|XP_003561433.1| PREDICTED: DAZ-associated protein 1-like [Brachypodium distachyon]
Length = 376
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 16 PSSTQNNAFFNYQAAVNN--NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQV 73
P Q+ + Q A N + + K+VFVGG+ TEDE F +G V V
Sbjct: 118 PEQGQDQGHQDNQTAGNGVVDGDDSASYSSKKVFVGGLRDNITEDEFRAYFEAFGTVTDV 177
Query: 74 KIVVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
++ D S+G+GF+TFDSEE +++ S + + K R+ AI K
Sbjct: 178 VVIYDSLTNRSRGFGFVTFDSEEAVRKVMGKSFHDL-KGTRVEAKIAIPKD 227
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGGI S+ E EL F+++G V+ V ++ DR G +G+GF+ F+ E+ A +
Sbjct: 22 RKLFVGGIPSSAQEGELRGHFARFGAVRSVVVMRDRETGHGRGFGFVEFEGEDAAAKALG 81
Query: 103 DSD 105
D +
Sbjct: 82 DGE 84
>gi|15242719|ref|NP_198865.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
gi|9758076|dbj|BAB08520.1| unnamed protein product [Arabidopsis thaliana]
gi|22531255|gb|AAM97131.1| ribonucleoprotein-like [Arabidopsis thaliana]
gi|332007170|gb|AED94553.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
Length = 423
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI S+ +DE E F Q+G +K+ +I+ D + G S+G+GF+T++SE+ L
Sbjct: 130 KKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLA 189
Query: 103 DSDNIMFKEKRLNIAPA 119
+ I ++ I A
Sbjct: 190 KGNRIELSGTQVEIKKA 206
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF-DSEEEAKRLQK 102
++FVGG+ TT E + F +YG + I+ DR G +G+GF+T+ DS K +Q
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQ- 101
Query: 103 DSDNIMFKEKRLNIAPAI 120
DN + K++ I I
Sbjct: 102 --DNHIIIGKQVEIKRTI 117
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 207 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 265
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 266 GYGFITFSDSECAKK 280
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 206 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 264
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 265 GYGFITFSDSECAKK 279
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 216 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 274
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 275 GYGFITFSDSECAKK 289
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 216 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 274
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 275 GYGFITFSDSECAKK 289
>gi|22330665|ref|NP_565132.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197724|gb|AEE35845.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 285
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + L + F QYG + + ++ D+ G SKGYGF+TF
Sbjct: 15 NSP-FGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFR 73
Query: 93 SEEEAKRLQKDSDNIMFKEKRLN 115
E A+R D I+ +R N
Sbjct: 74 DPEAARRACADPTPII-DGRRAN 95
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI E E F+Q+G + ++++D+ G S+G+GFIT+DS E R+ ++
Sbjct: 314 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSGEAVDRVCQN 373
Query: 104 SDNIMFKEKRLNIAPA 119
I FK+K++ I A
Sbjct: 374 K-YIQFKDKQIEIKRA 388
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFD 92
++F+GG+ TTE++L + FS+YG V +KI+ D +G S+G+GF++F+
Sbjct: 230 KLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFE 278
>gi|307208990|gb|EFN86190.1| Nuclear receptor coactivator 5 [Harpegnathos saltator]
Length = 650
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 44 KRVFVGGI-TSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
+R+FVG + T T+ EL + FS+YG V + I++G+GF+ F E+ A++ K
Sbjct: 14 RRIFVGHLQTDDVTKLELEDHFSKYGTVIG-------SSINRGFGFVQFQDEQSAQKAIK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
+ D MFK +R+++ PA K
Sbjct: 67 NEDGAMFKGRRIDVRPAKK 85
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + ++ L ELFS++G V K+ + G S+GYGF+ F S+E A + +
Sbjct: 132 IFVKNLNNSVDNASLQELFSKFGDVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLN 191
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDS 131
+F +++L++A IKK + D
Sbjct: 192 GSLFNDRKLHVATFIKKSERSANNDD 217
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V++ I +D L F++YG + K++ D GIS+G+GF+ + + EEAK +
Sbjct: 325 VYIKNIHDEVDDDALRARFAEYGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSVVNSMR 384
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+MF K L +A +K+
Sbjct: 385 GVMFFGKPLYVAIFQRKE 402
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + TE+ + FSQ+G + VKI+ G S G+GF++F + E A + Q+
Sbjct: 222 LYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPESAIKAQETMH 281
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ K L +A A KK+
Sbjct: 282 GMLLGSKALYVARAQKKE 299
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 76 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 135 GYGFITFSDSECAKK 149
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 76 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 135 GYGFITFSDSECAKK 149
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 202 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 260
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 261 GYGFITFSDSECAKK 275
>gi|255537972|ref|XP_002510051.1| DAZ-associated protein, putative [Ricinus communis]
gi|223550752|gb|EEF52238.1| DAZ-associated protein, putative [Ricinus communis]
Length = 370
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFIT 90
N N Y K++FVGG++S+ TE++ + F +G + V ++ D + +G+GF+T
Sbjct: 115 NGNGGDY--FRTKKIFVGGLSSSLTEEQFKDYFESFGKIVDVVVMQDSSTNRPRGFGFVT 172
Query: 91 FDSEEEA-KRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS 131
FDSE+ K ++K +M KR+ + A+ K+ +GT +S
Sbjct: 173 FDSEDSVDKAMEKTFHELM--GKRVEVKRAVPKEEISGTINS 212
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ T+ED L FS+YG V + D+ S+G+GF+ F + +D
Sbjct: 7 KIFVGGISRDTSEDALRVHFSKYGTVSGSLVAKDKITKNSRGFGFVWFSDSAFVDKALQD 66
Query: 104 SDNIM 108
S I+
Sbjct: 67 SHVIL 71
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 76 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 135 GYGFITFSDSECAKK 149
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 239 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 297
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 298 GYGFITFSDSECAKK 312
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
V R FVGG+ TT+ L E FSQYG V + K++ DR G S+G+GF+TF E+ K
Sbjct: 6 VEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMK 63
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 230 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 288
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 289 GYGFITFSDSECAKK 303
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 200 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 258
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 259 GYGFITFSDSECAKK 273
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 76 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 135 GYGFITFSDSECAKK 149
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L ELFS++G + K+++D G+SKG GF+ F + EEA R +
Sbjct: 758 LYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMN 817
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP--VPPVPTSNMYYHNGLPYTYHNGMA 162
M K L +A A +K+ + + SP + P+ + +H+G P +
Sbjct: 818 GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQL- 876
Query: 163 FFPSNGQSMVPTSPPTVPTQVKIL--LPPGV 191
+F ++PT P Q +++ + PGV
Sbjct: 877 YFGQGTPGLIPTQPAGYGFQQQLMPGMRPGV 907
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L + F+ +G V KI +D G SKGYGF+ F+ EE A+ K +
Sbjct: 563 VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLN 622
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++ Q
Sbjct: 623 GMLINDKQVYVGLFVRHQ 640
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
N +PK+ V+V ++ TTT+D+L +F +YG + ++ D +G+SK +GF+ F
Sbjct: 646 NGSPKF-----TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQ 700
Query: 93 SEEEAKRLQKDSDNIMFKEKRL 114
S + A + + F + ++
Sbjct: 701 SSDSAAAAVEHLNGATFNDDKV 722
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 23 AFFNYQAAVNNNAPKY--GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA 80
AF AAV+ + Y G ++VG + + E +L +LF Q V +++ D+A
Sbjct: 450 AFSGGGAAVHGDDGTYCGGRFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQA 509
Query: 81 -GISKGYGFITFDSEEEAKR---------LQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
S GY ++ F S ++A L IMF + P+I+K GF +
Sbjct: 510 RRASLGYAYVNFASPQDATNALEHLNFTPLNGKPIRIMFSHR----DPSIRKSGFANVF 564
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+ + + + T TE +L E+FS+YG V +V + + G +KG+ FI F ++EEA++ +
Sbjct: 768 REIHISNLDRTATEADLKEVFSKYGNVTRVNLPRNLVGKTKGFAFIDFATKEEAEKAVAE 827
Query: 104 SDNIMFKEKRLNIA----PAIKKQGFTGTYDSLPTVTSPVP 140
+N FK + L +A IK+ T D+ + +P P
Sbjct: 828 MNNTKFKSQILEVALSKESKIKRAATTVVADTARSSPAPSP 868
>gi|302685085|ref|XP_003032223.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
gi|300105916|gb|EFI97320.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
Length = 399
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +F+ + TE +L F YG++++V+IV D+ G S+GY FI ++ E + K K+
Sbjct: 114 KTLFISRLHKNATESDLRREFESYGMIERVRIVRDKQGRSRGYAFIVYERERDMKTAYKE 173
Query: 104 SDNIMFKEKRL 114
SD ++ KR+
Sbjct: 174 SDGLVILGKRI 184
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ T ++ L E F +YG V + +I++DR G S+G+GF+T+ S EEA +
Sbjct: 41 KLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQA 100
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D +R+ + A ++
Sbjct: 101 LDGQDLHGRRVRVNYATER 119
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + T T+D L LFSQYG V V ++ D G S+G+GF+ F + E AK+ +
Sbjct: 204 VYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAMESLC 263
Query: 106 NIMFKEKRLNIAPAIK--------KQGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
+ K+L + A+K KQ F+ + + P + SN+Y N
Sbjct: 264 GLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMR-------WSNLYVKN 310
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V ++ + E L E+F YG + K++ G SKG+GF+ F + EE+K+ ++ +
Sbjct: 306 LYVKNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLN 365
Query: 106 NIMFKEKRLNIAPAIKK--------QGFTG---TYDSLPTVTSPVPPV 142
+ K + + A +K Q F Y P+ SP PV
Sbjct: 366 GFLVDGKPIVVRVAERKEDRIKRLQQYFQAQPRQYTQAPSAPSPAQPV 413
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + S+ T L +F +G + K VV+ G SKG+GF+ FD+E+ A +
Sbjct: 114 LYVKNLDSSITSSCLERMFCPFGSILSCK-VVEENGQSKGFGFVQFDTEQSAVSARSALH 172
Query: 106 NIMFKEKRLNIAPAIKKQ---GFTGTYDS 131
M K+L +A I K G DS
Sbjct: 173 GSMVYGKKLFVAKFINKDERAAMAGNQDS 201
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 239 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 297
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 298 GYGFITFSDSECAKK 312
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 76 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 135 GYGFITFSDSECAKK 149
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 237 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 295
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 296 GYGFITFSDSECAKK 310
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGY 86
+ + + PK +++F+GG+ + TEDEL + FS YG V + +I++D + G S+G+
Sbjct: 133 EEMITKDGPK-----TRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGF 187
Query: 87 GFITFDSEEEAKRL 100
GF+TF+SE+ +R+
Sbjct: 188 GFVTFESEDSVERV 201
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKG 85
Y AV + G ++FVGG+ TTE+ + F +YG + I+ D+ + +G
Sbjct: 38 YADAVGEDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRG 97
Query: 86 YGFITF 91
+GF+TF
Sbjct: 98 FGFVTF 103
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 76 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 135 GYGFITFSDSECAKK 149
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G + +++++D G SK
Sbjct: 229 NRAAALANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSK 287
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 288 GYGFITFSDAECAKK 302
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|145362676|ref|NP_974899.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008157|gb|AED95540.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 371
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA-KRLQ 101
K++FVGG+ S+ TE E + F+Q+G++ V ++ D R +G+GFI++DSEE K LQ
Sbjct: 46 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 105
Query: 102 K 102
K
Sbjct: 106 K 106
>gi|429328163|gb|AFZ79923.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 570
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 89/220 (40%), Gaps = 46/220 (20%)
Query: 5 HPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKR--VFVGGITSTTTEDELCE 62
HPS + S S + A F + G++ P+R ++ GG+ +T TEDEL E
Sbjct: 290 HPSRLAKIESEEQSQETQASFK----------RTGSLEPERNEIYCGGLPTTVTEDELRE 339
Query: 63 LF-SQYGIVKQVKIVVDRAGISKGYGFITF-DSEEEAKRLQKDSDNIMFKEKRLNIAPAI 120
LF + G V ++ ++ KG FITF D E AK ++ D + M R+NI
Sbjct: 340 LFETDCGPVARINLIQ-----RKGVAFITFKDEESAAKAVEFDKTSYMGNPLRINITADR 394
Query: 121 KKQ-------------GFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFFPSN 167
+KQ G T ++DS P T P V N+ +H T GM S
Sbjct: 395 QKQPRGDKGQGGAGKFGRTKSFDSNPN-TQPSKEVCIRNLSFH-----TTEEGMRELFSE 448
Query: 168 GQSMVPTSPPTVPTQVKILLPPGVLLCGICLIFLITLALA 207
+V P K + G C I TL A
Sbjct: 449 CGEVVRCHIPKFQDSGKSM--------GRCFITFTTLEAA 480
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 216 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 274
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 275 GYGFITFSDSECAKK 289
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + +++L E F +G + VK+++D +G SKG+GF++F S EEA R + +
Sbjct: 346 LFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASRAISEMN 405
Query: 106 NIMFKEKRLNIAPAIKK 122
M K L +A A +K
Sbjct: 406 QHMLAGKPLYVALAQRK 422
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V I +E+E+ ELF+ +G V + D G S+G+ F+ ++ E A + + +
Sbjct: 243 VYVKNIDLEASEEEVKELFTPFGTVTSFYLEKDAEGKSRGFAFVNYEEHEAAVKSIESLN 302
Query: 106 NIMFKEKRLNIAPAIKK 122
+ +K K+L + A KK
Sbjct: 303 DQDYKGKKLYVGRAQKK 319
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + L + FS +G + K+ D G SKG+GF+ F+S E A+ ++ +
Sbjct: 150 VFIKNLHPAIDNKALHDTFSAFGRILSCKVATDNFGQSKGFGFVHFESPEAAQAAIENVN 209
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ + + P + ++
Sbjct: 210 GMLLNNNEVYVGPHVARR 227
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + T ++++ ELF++YG + K++ D G SKG GF+ F S +EA R + +
Sbjct: 308 LYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEATRAVTEMN 367
Query: 106 NIMFKEKRLNIAPAIKKQG----FTGTYDSLPTVTSPVPPVPTSNMYYHNGLP 154
M K L +A A +K+ + + T P VPTS YH G P
Sbjct: 368 GKMVGNKPLYVALAQRKEERRMRLQAAFAQMRTHVGPA--VPTSLPMYHPGAP 418
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F+ +G + K+ D +G SKGYGF+ F+ EE A+ + +
Sbjct: 114 IFIKNLDKSIDNKALHDTFAAFGNILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVN 173
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P +++Q
Sbjct: 174 GMLLNDKQVFVGPFVRRQ 191
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + TT+DEL ++F +G + ++ D G SK +GF+ F+ ++A + +
Sbjct: 205 VYVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSKCFGFVNFEHPDDAAKAVEALQ 264
Query: 106 NIMFKEKRLNIAPAIKK 122
F EK + A KK
Sbjct: 265 GKKFDEKEWYVGRAQKK 281
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 21 NNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDR 79
N A F+ ++++P Y +FVG + + ++ L E+F ++Y VK K+V+DR
Sbjct: 148 NWATFSSGEKRHDDSPDY------TIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDR 201
Query: 80 -AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
G SKGYGF+ F E E R + ++ + + I PA K
Sbjct: 202 NTGRSKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNK 245
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K++FVGG+ ST TE + + F Q+G++ V ++ D +G+GFIT+DSEE R+
Sbjct: 106 KKIFVGGLASTVTESDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRV 163
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T ED L E F +G V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERV 63
>gi|378731499|gb|EHY57958.1| hypothetical protein HMPREF1120_05978 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+FVG + T++ L + FSQY V++ +++ D R SKGYGF++F + ++ R ++
Sbjct: 233 RIFVGNLAGEVTDESLLKAFSQYPSVQKARVIRDKRTNKSKGYGFVSFANGDDYFRAARE 292
Query: 104 SDN-------IMFKEKRLNIAPAIKKQ 123
+ I+ K+ ++ P+I+KQ
Sbjct: 293 QNGKYVGSHPIIIKKAVTDVRPSIQKQ 319
>gi|356505295|ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 632
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V I +++EL + FS GI+ KI+ D GISKG+GF+ F + EEA +
Sbjct: 296 IYVKNIDDHVSDEELRDHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFH 355
Query: 106 NIMFKEKRLNIAPAIKKQ 123
MF K L +A A +K+
Sbjct: 356 GFMFHGKPLYVALAQRKE 373
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + L ++F +YG + K+V+ G SKGYGF+ F+SEE S
Sbjct: 102 LFVKNLPESIDNAGLQDMFKKYGNILSSKVVMSEDGKSKGYGFVQFESEE--------SS 153
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHN 151
N+ ++LN + KQ + G + P P +N+Y N
Sbjct: 154 NVAI--EKLNGSTVGDKQLYVGKFVKKSDRILPGPDARYTNLYMKN 197
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + +E L E FS +G + + I D G+SKG+GF+ +D+ ++AKR + +
Sbjct: 193 LYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGFGFVNYDNPDDAKRAMEAMN 252
Query: 106 NIMFKEKRLNIAPAIKK 122
K L +A A KK
Sbjct: 253 GSKLGSKILYVARAQKK 269
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGGI ++ +EDEL FS+YG V + +I+ D S+G+GFI FDSE+ +
Sbjct: 106 KKIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILA 165
Query: 103 DSDNIMFKEKRLNIAPA 119
D + I ++ I A
Sbjct: 166 DGNMIDMGGTQVEIKKA 182
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG+ TT + + F +YG + I+ DR G +G+GFIT+
Sbjct: 17 PGKIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITY 66
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
R+F+GG++ + L E+ SQYG V +I++DR G +G+GFIT+ + +EA R +
Sbjct: 43 RLFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGFGFITYSNVDEASRALQA 102
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D +R+ + AI++
Sbjct: 103 LDGQDLDGRRVEVKFAIER 121
>gi|313221681|emb|CBY36161.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVV-DRAGISKGYGFITFDSEEEAKRLQKD 103
++FVG + TE+++ +F ++G V+ ++I +RA G+GF+TF SEE K +
Sbjct: 343 QIFVGALPRNMTEEDINGVFEEFGEVQHIRINQGNRADSKNGFGFVTFKSEESVKNALEK 402
Query: 104 SDNIMFKEKRLNI 116
NIMF +LNI
Sbjct: 403 KHNIMFNGYQLNI 415
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 211 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 269
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 270 GYGFITFSDSECAKK 284
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ +T + L E F++YG V VK+++DR G S+G+GF+TF + E+A +
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D +R+ + A ++
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ +T + L E F++YG V VK+++DR G S+G+GF+TF + E+A +
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D +R+ + A ++
Sbjct: 101 MDGQDLHGRRIRVNYATER 119
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 8/75 (10%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++FVGGI + TEDE E F+Q+G V + +I+ D + S+G+GFITFD+E+
Sbjct: 96 RKIFVGGIPAVVTEDEFNEFFTQFGEVTEHQIMRDHSTNRSRGFGFITFDTEQAV----- 150
Query: 103 DSDNIMFKEKRLNIA 117
D+++ + +L +A
Sbjct: 151 --DDLLARGNKLELA 163
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ TT + + F +YG + I+ DR G +G+GF+T+ ++
Sbjct: 7 PGKIFIGGLARETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVI 66
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYD--SLPTVTSPVPPVPTSNMY 148
+D+ I K++ I I K G G+ D + +P V T + +
Sbjct: 67 QDTHII--NGKQVEIKRTIPK-GVVGSKDFRTRKIFVGGIPAVVTEDEF 112
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 113 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 171
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 172 GYGFITFSDSECAKK 186
>gi|242066212|ref|XP_002454395.1| hypothetical protein SORBIDRAFT_04g030020 [Sorghum bicolor]
gi|241934226|gb|EES07371.1| hypothetical protein SORBIDRAFT_04g030020 [Sorghum bicolor]
Length = 295
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 29/141 (20%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T D L + ++G + + ++ DR +G SKGYGF+TF +
Sbjct: 39 FGDTTHTKVFVGGLAWETNSDRLRRFYERFGDILEAVVITDRHSGRSKGYGFVTFREADS 98
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPP-----------VPTS 145
A++ +D ++ +R N A SL PVPP VP
Sbjct: 99 ARKACEDPTPVI-DGRRANCNLA-----------SLGRAQHPVPPGRPRSAGSYFGVPVP 146
Query: 146 NMYY-----HNGLPYTYHNGM 161
+Y H P Y+ G
Sbjct: 147 RAFYLGGYGHRPFPLGYYQGF 167
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G SKGYGF+ FDSEE A++ + +
Sbjct: 115 IFIKNLDKAIDHKALHDTFSVFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLN 174
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 175 GMLLNDKQVYVGPFLRKQ 192
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + ++++ ELFS +G + K++ D GIS+G GF+ F + EEA R + +
Sbjct: 309 LYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 369 GKMVASKPLYVALAQRKE 386
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ TT E++L + F ++G + V ++ D G S+ +GF+ F++ ++A + + +
Sbjct: 206 VFVKNLSETTAEEDLNKAFGEFGTITSVVVMRDGDGKSRCFGFVNFENADDAAKAAEALN 265
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 266 GKKFDDKEWFVGKAQKK 282
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + + T+ +L +LF+Q G V V++ D + S GYG++ + + ++A R
Sbjct: 27 LYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAAR 81
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V I + TT+DE ELF +YG + + D G +G+GF+ F E+A + + +
Sbjct: 238 IYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQGKVRGFGFVNFIRHEDAAKAVDELN 297
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ FK ++L + A KK
Sbjct: 298 DLDFKGQKLYVGRAQKKH 315
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L + F+ +G + K+ VD G SKGYGF+ +++ + A + K +
Sbjct: 145 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEHGNSKGYGFVHYETSDAANQAIKSVN 204
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++ EK++ + I K+ ++ +
Sbjct: 205 GMLLNEKKVFVGHHIPKKDRMSKFEEM 231
>gi|357161949|ref|XP_003579258.1| PREDICTED: uncharacterized protein LOC100834061 [Brachypodium
distachyon]
Length = 668
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 30 AVNNNAP-----KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISK 84
A NN P G V VFVGG+ + TE L E+FS G + ++I+ D+ G+SK
Sbjct: 51 AANNAVPWGYVCAAGRVKGTEVFVGGLPRSATEGTLREVFSPCGEIVDLRIMKDQNGVSK 110
Query: 85 GYGFITFDSEEEAKRLQKDSDNIMFKEKRLNI 116
G+GF+ F E A ++ + I + KRL +
Sbjct: 111 GFGFVRFAERECAYTAKRQKNGIELQGKRLAV 142
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ + TTE L + FS+YG + +V ++ DR S+G+ F+TF+S +AK
Sbjct: 7 PGKLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAA 66
Query: 102 KDSDNIMFKEKRLNIAPAIKKQ 123
++ + K + + A K Q
Sbjct: 67 REMNGKSLDGKNIKVEQATKPQ 88
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
++F+GG++ +T E L E FS+YG V +I++DR G S+G+GFIT+ S EEA
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGG+ T TED+ + F Q+G + V ++ D +G+GFIT+DSE+ ++ +
Sbjct: 101 KKIFVGGLAPTVTEDDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQ 160
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ + KEK + + AI K
Sbjct: 161 QTFH-QLKEKTVEVKRAIPKD 180
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GGI+ T+ED L + F YG V V I+ DR G ++G+GF+ F A R+ ++
Sbjct: 7 KIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQE 66
Query: 104 S---DNIMFKEKRL 114
D + KR+
Sbjct: 67 KHTIDGRAVEAKRV 80
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +++ ++ ED+L +LFSQ+G +K V++V+D+AG SKG+ F+ F +E AK
Sbjct: 824 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKA-ALS 882
Query: 104 SDNIMFKEKRLNI 116
+N+ K++R+ +
Sbjct: 883 MNNVELKKRRIGV 895
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 211 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 269
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 270 GYGFITFSDSECAKK 284
>gi|167527097|ref|XP_001747881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773630|gb|EDQ87268.1| predicted protein [Monosiga brevicollis MX1]
Length = 553
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
+++ + TEDEL ++F YG + V++V DR G S+ +GF+ F SEEEA R
Sbjct: 316 LYIKNFSEDVTEDELRKMFEAYGTIVSVRVVKDRDGQSRQFGFVLFSSEEEATR 369
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 211 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 269
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 270 GYGFITFSDSECAKK 284
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 211 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 269
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 270 GYGFITFSDSECAKK 284
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 211 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 269
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 270 GYGFITFSDSECAKK 284
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K++FVGG+ ST TE + + F Q+G + V ++ D +G+GFIT+DSEE +R+
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERV 163
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GGI+ T ED L E F YG V + I+ DR G ++G+GF+ F A+R+ D
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK- 102
++F+GG++ +T + L E F +YG V + +++VDR G S+G+GF+TF S EEA +
Sbjct: 41 KLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 103 -DSDNIMFKEKRLNIA 117
D ++ + R+N A
Sbjct: 101 LDGQDLHGRRVRVNYA 116
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L E+FS+YG V K++++ G+S+G+GF+ + + EEA R + +
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMAFFP 165
M K L IA A +K+ P P S ++ G P +
Sbjct: 394 GKMIGRKPLYIALAQRKEDRRAHLQIR-------APGPMSGFHHPPGGPMPGPPQHMYVG 446
Query: 166 SNGQSMVPTSP 176
NG SMVP+ P
Sbjct: 447 QNGASMVPSQP 457
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + ++ L E FS +G + K+ +D G SKGYGF+ F+ EE A+ +
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I++Q
Sbjct: 198 GMLMNDKQVFVGHFIRRQ 215
Score = 43.1 bits (100), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + EDEL + F ++G++ ++ D++G S+ +GF+ F+ E A + +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290
Query: 106 NIMFKEKRLNIAPAIKK 122
I + L + A KK
Sbjct: 291 GISLGDDVLYVGRAQKK 307
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 211 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 269
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 270 GYGFITFSDSECAKK 284
>gi|356522484|ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786208 [Glycine max]
Length = 296
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGY 86
Q NN +Y ++FVGG+ T D + F Q+G + + ++ D+ G SKGY
Sbjct: 8 QMVGGNNPDQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGY 67
Query: 87 GFITFDSEEEAKRL-QKDSDNIMFKEKRLNIA 117
GF+TF E A R Q S I + N+A
Sbjct: 68 GFVTFKDPESAMRACQNPSPVIDGRRANCNLA 99
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L E F +YG ++ ++I+ D+ +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHD 152
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTED L + Q+G + ++ D A S+G+GF+TF S +E
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDE 62
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G+SKG+GF+ FDSEE A++ +
Sbjct: 120 IFIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLN 179
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 180 GMLLNDKQVFVGPFVRKQ 197
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELF+Q+G + K++ D G+S+G GF+ F S EEA R + +
Sbjct: 314 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 373
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ M K L +A A +K+
Sbjct: 374 SKMVVSKPLYVALAQRKE 391
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV I+ TE++L +F ++G + V ++ D G SK +GF+ F++ ++A + +
Sbjct: 211 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALN 270
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 271 GQKFDDKEWYVGKAQKK 287
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L E F +YG ++ ++I+ D+ +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHD 152
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTED L + Q+G + ++ D A S+G+GF+TF S +E
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDE 62
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V++ D L E+F ++G VK++ D +G SKG+GF++++ E+A+R + +
Sbjct: 498 VYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDESGKSKGFGFVSYEKHEDAQRAVDEMN 557
Query: 106 NIMFKEKRLNIAPAIKK 122
F KR+ + A KK
Sbjct: 558 GKEFNGKRIYVGRAQKK 574
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + ++ L + FS +G + K++++ G S+G+GF+ F + EEA + + +
Sbjct: 601 LYVKNLDDSIDDERLRKAFSPFGTITSAKVMME-GGHSRGFGFVCFSAPEEAAKAVSEMN 659
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ K L +A A +K+
Sbjct: 660 GKLVATKPLYVALAQRKR 677
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
+F+ + + L + FS +G + K++ D G SKGYGF+ F++++ A +
Sbjct: 406 IFIKNLEKSIDNKALYKTFSAFGNILSCKVISDENG-SKGYGFVHFENQQAADK 458
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L E F +YG ++ ++I+ D+ +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHD 152
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTED L + Q+G + ++ D A S+G+GF+TF S +E
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDE 62
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L E F +YG ++ ++I+ D+ +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHD 152
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTED L + Q+G + ++ D A S+G+GF+TF S +E
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDE 62
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + T++E ELF++YG V + VD G SKG+GF+ ++S EEA+ +
Sbjct: 228 LYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAVDNLH 287
Query: 106 NIMFKEKRLNIAPAIKK 122
+ K K+L + A KK
Sbjct: 288 DTDLKGKKLYVTRAQKK 304
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + F +G V K+ D G SKGYGF+ +++ E A+ K +
Sbjct: 135 IFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVN 194
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++ +K++ + P I ++ D +
Sbjct: 195 GMLLNDKKVYVGPHIPRKERQSKLDEM 221
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKG 85
+Y+ A KY V ++V + +D+L F +G + K++ D G SKG
Sbjct: 314 SYEQAKMEKLSKYQGV---NLYVKNLEDDVDDDKLRAEFEPFGTITSCKVMSDEKGSSKG 370
Query: 86 YGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
+GF+ F S +EA + + +N M K L ++ A +++
Sbjct: 371 FGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSLAQRRE 408
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
K++FVGGI +T TEDE FS++G V + +I+ D + S+G+GFI FD+E+ L
Sbjct: 103 KKIFVGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLA 162
Query: 103 DSDNIMFKEKRLNIAPAIKKQ 123
+ + I ++ I A K+
Sbjct: 163 EGNRIDMMGTQVEIKKAEPKK 183
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDS 93
P ++F+GG+ TT ++ + F +YG + I+ DR G +G+GFIT++
Sbjct: 14 PGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYED 65
>gi|222623166|gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japonica Group]
Length = 459
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGG+ S EDE E FS++G V + +I+ D + S+G+GF+ FD+E+ L
Sbjct: 103 KKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLA 162
Query: 103 DSDNIM 108
N++
Sbjct: 163 KKGNMI 168
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQ 101
P ++F+GG+ TT E F +YG + I+ DR +G+GFITF R+
Sbjct: 14 PAKIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRVI 73
Query: 102 KDSDNIMFKE 111
+D+ I KE
Sbjct: 74 EDNHVINGKE 83
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 233 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 291
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 292 GYGFITFSDSECAKK 306
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K++FVGG+ ST TE + + F Q+G + V ++ D +G+GFIT+DSEE +R+
Sbjct: 106 KKIFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERV 163
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GGI+ T ED L E F YG V + I+ DR G ++G+GF+ F A+R+ D
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +++L ELFS++G + K+++D G+SKG GF+ F + EEA R +
Sbjct: 298 LYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMN 357
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP--VPPVPTSNMYYHNGLPYTYHNGMA 162
M K L +A A +K+ + + SP + P+ + +H+G P +
Sbjct: 358 GKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQL- 416
Query: 163 FFPSNGQSMVPTSPPTVPTQVKIL--LPPGV 191
+F ++PT P Q +++ + PGV
Sbjct: 417 YFGQGTPGLIPTQPAGYGFQQQLMPGMRPGV 447
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L + F+ +G V KI +D G SKGYGF+ F+ EE A+ K +
Sbjct: 103 VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLN 162
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++ Q
Sbjct: 163 GMLINDKQVYVGLFVRHQ 180
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
N +PK+ V+V ++ TTT+D+L +F +YG + ++ D +G+SK +GF+ F
Sbjct: 186 NGSPKF-----TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQ 240
Query: 93 SEEEA 97
S + A
Sbjct: 241 SSDSA 245
>gi|294878540|ref|XP_002768400.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
gi|239870803|gb|EER01118.1| Ser/Arg-rich splicing factor, putative [Perkinsus marinus ATCC
50983]
Length = 414
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
+++F+GG+ S + EL + FSQ+G ++ +++DR G S+G+GFITF ++ +
Sbjct: 43 RKLFLGGLPSNCDKQELKDYFSQFGEIEDSIVMMDRVTGRSRGFGFITFLHPQDMEACLD 102
Query: 103 DSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGMA 162
DS +++ +K +++ A+ +G G P +T P+ + +N + Y Y+ G+
Sbjct: 103 DSPHVVM-DKTIDVKRAV--EGGLG-----PRITRHEGPMKDAAWSENNYMGYHYNRGVV 154
Query: 163 FFPSNG 168
P G
Sbjct: 155 AGPGGG 160
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQ 101
PK+VF+GG+ + L + SQYG V ++ DR G ++G+G+ TF + EA
Sbjct: 189 PKKVFIGGLPPCADNNSLTRMLSQYGSVVSCNVMFDRGTGRNRGFGYATFSTPREANDAC 248
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYY 149
DN + K + + P + + F T + + VP P+S+ Y
Sbjct: 249 HGGDNNVMDGKWVEVKPCTRLE-FP-TTEGAAAAAANVPKSPSSSAMY 294
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
P +VF+GG+ + + + E SQYG V++V ++ DR G +G+ + TF + +EA
Sbjct: 321 PCKVFLGGLPQSADQSRVTEHLSQYGHVQEVTVMYDRETGRHRGFAYATFSNNDEA 376
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GG+ TT+D L E FS+YG +++ +V DR S+G+GF+ F SE EA
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 104 SDNIMFKEKRLNI-----APAIKKQGFTG 127
+N F + + + PA + GF G
Sbjct: 63 MNNQEFDGRIIRVDKASERPAARNGGFQG 91
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDS 93
++F+GG+ TTED L + FS+YG V+++KI+ D A G S+G+GF+TF+S
Sbjct: 123 KMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFES 172
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI E E F+Q+G + ++++D+ G S+G+GFIT+D+ + ++ ++
Sbjct: 207 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDKVCQN 266
Query: 104 SDNIMFKEKRLNIAPA 119
I FK +++ I A
Sbjct: 267 K-FIDFKGRKIEIKRA 281
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
++F+GG++ +T E L E FS+YG V +I++DR G S+G+GFIT+ S EEA
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
V+ R FVGG+ T D L + FS YG + + K+++DR G S+G+GF+TF SE+ K
Sbjct: 5 VIEYRCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMK 63
>gi|443705196|gb|ELU01851.1| hypothetical protein CAPTEDRAFT_169740 [Capitella teleta]
Length = 186
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDS 93
K++FVGGI TTE L E FS+YG ++ + I+ D+ S+G+GFITFD
Sbjct: 60 KKIFVGGIKEDTTEAHLREYFSEYGPIESIDIITDKETKRSRGFGFITFDD 110
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G SKGYGF+ FD+EE A++ + +
Sbjct: 114 IFIKNLDKGIDHKALHDTFSAFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLN 173
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 174 GMLLNDKQVYVGPFLRKQ 191
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D L +LFS +G + K++ D GIS+G GF+ F + EEA + + +
Sbjct: 308 LYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMN 367
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
M K L +A A +K+ + + PV P+
Sbjct: 368 GKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAPS 406
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TTTE++L + F +YG + ++ D G +K +GF+ F++ ++A + +
Sbjct: 205 VYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKTKCFGFVNFENADDAATAVEALN 264
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 265 GKKFDDKEWFVGKAQKK 281
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
++VG + + T+ L +LF+Q G V V++ D S GYG++ + S ++A R
Sbjct: 26 LYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAAR 80
>gi|68073863|ref|XP_678846.1| spliceosome-associated protein [Plasmodium berghei strain ANKA]
gi|56499442|emb|CAH97651.1| spliceosome-associated protein, putative [Plasmodium berghei]
Length = 366
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
V +F+G + + E L ++FS +G V VKIV + SKG+GFI++D+ E +
Sbjct: 105 VGANLFIGNLDTEVEEKMLFDIFSSFGQVISVKIVRNEDDTSKGHGFISYDNFESSDLAI 164
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTG 127
++ +N K+++I+ A KK GF G
Sbjct: 165 ENMNNQFICNKKVHISYAFKK-GFKG 189
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFI 89
+++ + + E+ LCELF Q G VK V I D+ G GYGF+
Sbjct: 22 LYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFV 66
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ++ L + F+ +G V K+ +D +G SKGYGF+ FD+EE A+ K +
Sbjct: 125 VFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLN 184
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I++Q
Sbjct: 185 GMLINDKQVYVGLFIRRQ 202
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
+Y + +++ + + ++++L +LFS++G + K+++D G SKG GF++F + EE
Sbjct: 311 RYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEE 370
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP--VPPVPTSNMYYHNGL 153
A + + + + K L +A A +K+ + + +P + P+P YH G
Sbjct: 371 ASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAPLPAGIPLYHPGA 430
Query: 154 PYTYHNGMAFFPSNGQSMVPTSPPTVPTQVKIL--LPPGV 191
P + ++ +P P Q +IL + PGV
Sbjct: 431 PRLAPQQL-YYGQGTPGFMPPQPAGFSFQQQILPGMRPGV 469
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
N +PK+ V+V ++ T T+++L +LF YG + ++ D G S+ +GF+ F
Sbjct: 208 NGSPKF-----TNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQ 262
Query: 93 SEEEA 97
+ + A
Sbjct: 263 NPDSA 267
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 124 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 179
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 36 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 89
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
G K++FVGGI + TEDEL E FS YG + +I++D + G S+G+GF+TFD E+
Sbjct: 84 GVTRTKKIFVGGIPPSLTEDELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAV 143
Query: 98 KRL 100
+++
Sbjct: 144 EQI 146
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR-LQK 102
++FVGG++ TTE+ FS+YG V I+ DR +G +G+GF+TF A R L++
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPAVADRVLEE 60
Query: 103 D 103
D
Sbjct: 61 D 61
>gi|198421867|ref|XP_002121273.1| PREDICTED: similar to squamous cell carcinoma antigen recognised by
T cells 3 [Ciona intestinalis]
Length = 930
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
KY T + K ++FV G+ TTE+ L ++FS++G+VK +IVV + G SKG FI +++E
Sbjct: 766 KYETKIEKHKLFVSGLNFATTEETLQKVFSEHGVVKSARIVVTKGGKSKGIAFIEYENES 825
Query: 96 EAKR 99
+A +
Sbjct: 826 DAAQ 829
>gi|57530708|ref|NP_001006360.1| transformer-2 protein homolog alpha [Gallus gallus]
gi|53127932|emb|CAG31257.1| hypothetical protein RCJMB04_4g4 [Gallus gallus]
Length = 277
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTE +LCE+FS+YG + V +V D R G S+G+ F+ F+ +++K + ++
Sbjct: 125 VFGLSLYTTERDLCEVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMEHANG 184
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPT 134
+ +R+ + +I K+ T G Y PT
Sbjct: 185 MELDGRRIRVDYSITKRAHTPTPGIYMGRPT 215
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA-KRLQ 101
K++FVGG+ S+ TE E + F+Q+G++ V ++ D R +G+GFI++DSEE K LQ
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 102 K 102
K
Sbjct: 166 K 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T+ED L + F +G V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERV 63
>gi|358340633|dbj|GAA48482.1| RNA-binding protein Musashi, partial [Clonorchis sinensis]
Length = 154
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 7 SEGSSNPSSPSSTQNNAFFNYQAAVNNNA-----PKYGTVVPKRVFVGGITSTTTEDELC 61
++ ++ PSSP+ T N+ + ++ V K+VF+GG+ + TT +EL
Sbjct: 25 AQSTAGPSSPTCTVNSPVASMSGTTMDHWSATLLAAQALVRTKKVFIGGVATGTTAEELE 84
Query: 62 ELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
FS++G V+ ++++D++ +G+GF+TF+SE A+++
Sbjct: 85 TFFSEFGKVETCELMMDKSTNRHRGFGFVTFESEVAAEKV 124
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + ++ L + F+ +G V K+ +D +G SKGYGF+ FD+EE A+ K +
Sbjct: 125 VFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLN 184
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I++Q
Sbjct: 185 GMLINDKQVYVGLFIRRQ 202
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
+Y + +++ + + ++++L +LFS++G + K+++D G SKG GF++F + EE
Sbjct: 311 RYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEE 370
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDS-LPTVTSP--VPPVPTSNMYYHNGL 153
A + + + + K L +A A +K+ + + +P + P+P YH G
Sbjct: 371 ASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAQFAQIRAPGGMAPLPAGIPLYHPGA 430
Query: 154 PYTYHNGMAFFPSNGQSMVPTSPPTVPTQVKIL--LPPGV 191
P + ++ +P P Q +IL + PGV
Sbjct: 431 PRLAPQQL-YYGQGTPGFMPPQPAGFSFQQQILPGMRPGV 469
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
N +PK+ V+V ++ T T+++L +LF YG + ++ D G S+ +GF+ F
Sbjct: 208 NGSPKF-----TNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQ 262
Query: 93 SEEEA 97
+ + A
Sbjct: 263 NPDSA 267
>gi|224126549|ref|XP_002319865.1| predicted protein [Populus trichocarpa]
gi|222858241|gb|EEE95788.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 32 NNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFIT 90
+N A ++G +VFVGG+ T ++ + + F Q+G + + ++ D+A G SKGYGF+T
Sbjct: 4 SNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVIADKATGRSKGYGFVT 63
Query: 91 FDSEEEAKRLQKDSDNIMFKEKRLN 115
F + A R D+ ++ +R N
Sbjct: 64 FREPDAAMRACVDASPVI-DGRRAN 87
>gi|356560243|ref|XP_003548403.1| PREDICTED: uncharacterized protein LOC100788899 [Glycine max]
Length = 291
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 28 QAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGY 86
Q NN +Y ++FVGG+ T D + F Q+G + + ++ D+ G SKGY
Sbjct: 8 QMVGGNNPDQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGY 67
Query: 87 GFITFDSEEEAKRL-QKDSDNIMFKEKRLNIA 117
GF+TF E A R Q S I + N+A
Sbjct: 68 GFVTFKDPESAMRACQNPSPVIDGRRANCNLA 99
>gi|242042864|ref|XP_002459303.1| hypothetical protein SORBIDRAFT_02g002070 [Sorghum bicolor]
gi|241922680|gb|EER95824.1| hypothetical protein SORBIDRAFT_02g002070 [Sorghum bicolor]
Length = 329
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K+VF+GG+ TE+E F +G V V ++ D A S+G+GF+TFDSEE ++ +
Sbjct: 97 KKVFIGGLRDNITEEEFRSYFETFGTVTDVVVIYDSATSRSRGFGFVTFDSEEAVGKVMR 156
Query: 103 DS 104
S
Sbjct: 157 QS 158
>gi|224100853|ref|XP_002312040.1| predicted protein [Populus trichocarpa]
gi|222851860|gb|EEE89407.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
++N ++G +VFVGG+ T ++ L E F +YG + + I+ D+ G SKGYGF+
Sbjct: 3 MSNGVGQFGDTTLTKVFVGGLAWETPKEALREHFEKYGEILEAVIISDKITGRSKGYGFV 62
Query: 90 TFDSEEEAKRLQKDSDNIMFKEKRLN 115
TF A + +D+ I+ +R N
Sbjct: 63 TFKEAGAANKACEDAAPII-NGRRAN 87
>gi|119614244|gb|EAW93838.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614246|gb|EAW93840.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614247|gb|EAW93841.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
Length = 301
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 57 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 112
>gi|37747847|gb|AAH59107.1| Hnrpa2b1 protein, partial [Mus musculus]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 15 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 70
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 124 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 179
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 36 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 89
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKR-LQ 101
K++FVGG+ ST TED + F +GIV V ++ D+ +G+GFITFDSE+ R LQ
Sbjct: 118 KKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQ 177
Query: 102 K 102
K
Sbjct: 178 K 178
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GGI+ TTE++L E FS YG V Q ++ D+ G +G+GF+ F R +D
Sbjct: 7 KLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRALQD 66
>gi|406946955|gb|EKD77999.1| glycine-rich RNA-binding protein, partial [uncultured bacterium]
Length = 107
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAK 98
+++VG ++ TTED L + FSQYG ++++K+++D G SKG+GFIT+ S ++ +
Sbjct: 5 KIYVGNLSYNTTEDGLRDYFSQYGTIEEIKLIIDFNTGRSKGFGFITYGSAQDCE 59
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F++YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISK 84
N AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SK
Sbjct: 76 NRAAAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSK 134
Query: 85 GYGFITFDSEEEAKR 99
GYGFITF E AK+
Sbjct: 135 GYGFITFSDSECAKK 149
>gi|414868392|tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
Length = 348
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGG+ S EDE E FS++G V + +I+ D A S+G+GFI FD+E+ L
Sbjct: 102 KKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLH 161
Query: 103 DSDNIM 108
N++
Sbjct: 162 KKGNMI 167
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRLQ 101
P ++F+GG++ T+ E F +YG + I+ DR +G+GFITF R+
Sbjct: 13 PAKIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDRVI 72
Query: 102 KDSDNI 107
+D I
Sbjct: 73 EDEHVI 78
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKR 99
+ ++FVG + TT+D L FSQ G V +++ DRA G SKG+GF+ S+EEA++
Sbjct: 1 MATKLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQK 59
>gi|341890610|gb|EGT46545.1| hypothetical protein CAEBREN_32157 [Caenorhabditis brenneri]
Length = 847
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
K+ T + K ++FV + T+DEL LFS++G V V+ V R G KG FI F+SE
Sbjct: 674 KFSTGLEKSKIFVRNVHFQATDDELNALFSKFGKVTSVRRVTHRDGKPKGVAFIDFESEA 733
Query: 96 EAKRLQKDSDNIMFKEKRLNIA---PAIKKQ 123
A++ D + +++ L +A P KK+
Sbjct: 734 CAQKCVASGDKLTLRDRELEVAISNPPAKKE 764
>gi|294656916|ref|XP_002770331.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
gi|199431836|emb|CAR65685.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
Length = 842
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
R+FV I T+TE E ELF YG +++V + +D R G SKG+ +I F E A
Sbjct: 308 RLFVRNILYTSTEQEFRELFETYGPLEEVHVAIDTRTGKSKGFVYIQFFKSENAVSAYHA 367
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
D +F+ + L+I PA KK+
Sbjct: 368 LDKQIFQGRLLHILPAEKKK 387
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
R+ V G+ TE +L E FS+ G V VK++ R G S+ + FI + S E+A++ +
Sbjct: 3 RLIVKGLPKYFTEQKLREHFSKKGDVTDVKLMKKRNGESRRFAFIGYKSFEDAEKSARFF 62
Query: 105 DNIMFKEKRLNIAPA 119
D R+++ A
Sbjct: 63 DKSFIDTARIDVELA 77
>gi|344238619|gb|EGV94722.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Cricetulus
griseus]
Length = 282
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 38 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 93
>gi|431838846|gb|ELK00775.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Pteropus alecto]
Length = 106
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR 99
+ K++FVGGI T E + F +YG + ++I++DR +G +G+GF+TFD + A +
Sbjct: 34 ITVKKLFVGGIKEDTEEHHFKDYFEEYGKIDTIEIIIDRQSGKKRGFGFVTFDDHDPADK 93
Query: 100 L 100
+
Sbjct: 94 I 94
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 139 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 194
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 51 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 104
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ +V A KY ++V + + +D+L ELF+ +G + K++ D GIS+G
Sbjct: 297 FEQSVKEAADKYQGA---NLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGS 353
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
GF+ F S EEA R + + M K L +A A +K+
Sbjct: 354 GFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKE 390
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G SKG+GF+ FD+EE A + + +
Sbjct: 119 IFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLN 178
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 179 GMLLNDKQVFVGPFLRKQ 196
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
VFV + TT+E++L +F ++G + V ++ D G SK +GF+ F++ ++A R
Sbjct: 210 VFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAAR 263
>gi|328855010|gb|EGG04139.1| hypothetical protein MELLADRAFT_78422 [Melampsora larici-populina
98AG31]
Length = 325
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+++FVG + TT ED+L ELF +G + V+I++ R S GYGF+TFD E+A++
Sbjct: 35 RKIFVGNLNFTTKEDQLKELFVAHGSISDVQIIL-RGTRSLGYGFVTFDKAEDAEKAVAA 93
Query: 104 SDNIMFKEKRLNI 116
D + +N+
Sbjct: 94 IDKTEIDGRTVNV 106
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEA 97
GT +VF+GG+ S TE +L FSQYG V +V I+ D+ S+G+GF+TF+SEE
Sbjct: 110 GTGNGYKVFLGGLPSNLTETDLRNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESV 169
Query: 98 KR 99
R
Sbjct: 170 DR 171
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYG-IVKQVKIVVDRAGISKGYGFITF 91
++F+GG++ TT D L FSQYG +V V + G S+G+GFITF
Sbjct: 21 KMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITF 68
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ +V A KY ++V + + +D+L ELF+ +G + K++ D GIS+G
Sbjct: 297 FEQSVKEAADKYQGA---NLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGS 353
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
GF+ F S EEA R + + M K L +A A +K+
Sbjct: 354 GFVAFSSPEEAARALAEMNGRMIVSKPLYVALAQRKE 390
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G SKG+GF+ FD+EE A + + +
Sbjct: 119 IFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLN 178
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 179 GMLLNDKQVFVGPFLRKQ 196
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
VFV + TT+E++L +F ++G + V ++ D G SK +GF+ F++ ++A R
Sbjct: 210 VFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENADDAAR 263
>gi|326487203|dbj|BAJ89586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T L + F +YG + + ++ DR G SKGYGF+TF E
Sbjct: 45 RFGDTTLTKVFVGGLAWETPSAGLHDHFREYGEILEAVVITDRETGRSKGYGFVTFRDPE 104
Query: 96 EAKRLQKDSDNIMFKEKRLN 115
A++ ++ N M +R N
Sbjct: 105 SAQQAVQNP-NPMIAGRRAN 123
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 54 TTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEK 112
+ TE +L ELF +G +K +KI+ DR S GYGF+ F++ EEA R + + + K
Sbjct: 94 SVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAARAIQAMNGRQYMNK 153
Query: 113 RLNIAPA-------------IKKQGFTGTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHN 159
RL ++ A IK T T D L + +P + ++ + Y +P
Sbjct: 154 RLKVSIARPSSSSITGANLYIKNLPRTITEDQLRAIFNPFGEIISARLLYDGDVP----K 209
Query: 160 GMAF 163
G+AF
Sbjct: 210 GIAF 213
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 8/181 (4%)
Query: 24 FFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS 83
+ N + V+ P ++ +++ + T TED+L +F+ +G + +++ D +
Sbjct: 150 YMNKRLKVSIARPSSSSITGANLYIKNLPRTITEDQLRAIFNPFGEIISARLLYD-GDVP 208
Query: 84 KGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVP 143
KG F+ FD A+R + +N + IA K T P+ +S +
Sbjct: 209 KGIAFVRFDKRACAERAVAELNNTVPANCSQPIA---VKFADTNRRSRAPSGSSAG--MH 263
Query: 144 TSNMYYHNGLPYTYHNGMAFFPSNGQSMVPTSPPTVPTQVKILLPPGVLLCGICLIFLIT 203
+M + +P Y G P +M P P VP +L P G CL F+
Sbjct: 264 QGSMMAYPSMPMPYGGGFQQ-PQPQPTMAPLQPGFVPMSPDMLPPSARTPYGYCL-FVFN 321
Query: 204 L 204
L
Sbjct: 322 L 322
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
V ++F+GG++ TTE L E FS+ G V + +IV+DR + SKG+GF+TF S +EA++
Sbjct: 32 VASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKA 91
Query: 101 QKDSDNIMFKEKRLNIAPAIKKQGFTG 127
+ + + + + A KQ G
Sbjct: 92 LMEFNGQQLNGRTIFVDYAKAKQSLGG 118
>gi|312378939|gb|EFR25365.1| hypothetical protein AND_26913 [Anopheles darlingi]
Length = 85
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVG I T EL FSQ+G V ++V DR G+SKGYGF++F + + L+++
Sbjct: 10 KIFVGNIAWTVGHRELRNYFSQFGKVSWAQVVFDRKTGLSKGYGFVSFQKKTALENLERN 69
Query: 104 SDNIM 108
+I+
Sbjct: 70 QKHIL 74
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ TE+ L E FS+YG V + +V D+ I KG+GF+ F S EEA +++
Sbjct: 36 KLFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAREE 95
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
+ + + + I K D+LP PP P SN
Sbjct: 96 MNGKALNGRVIYV--DIAKAKPDRATDALPIARG--PPKPISN 134
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 153 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 208
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 65 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 118
>gi|6554473|gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-18423 [Arabidopsis thaliana]
gi|12323977|gb|AAG51948.1|AC015450_9 putative RNA-binding protein; 24808-23340 [Arabidopsis thaliana]
Length = 279
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + L + F QYG + + ++ D+ G SKGYGF+TF
Sbjct: 15 NSP-FGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFR 73
Query: 93 SEEEAKRLQKDSDNIMFKEKRLN 115
E A+R D I+ +R N
Sbjct: 74 DPEAARRACADPTPII-DGRRAN 95
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL--Q 101
++FVGG++ T E L E FSQ+G V + ++++DR G S+G+GF++F S EEA
Sbjct: 41 KLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTA 100
Query: 102 KDSDNIMFKEKRLNIA 117
D ++ ++ R+N A
Sbjct: 101 LDGQDLHGRQIRVNYA 116
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELFS++G + K++ D +GIS+G GF+ F + EEA R + +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 362 GKMVVSKPLYVALAQRKE 379
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + FS +G + KI D +G SKGYGF+ FD+EE A+ +
Sbjct: 108 IFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLN 167
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++KQ
Sbjct: 168 GMLINDKQVYVGQFLRKQ 185
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ +TTE++L +F ++GI+ V ++ D G SK +GF+ F++ ++A + +
Sbjct: 199 VYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALN 258
Query: 106 NIMFKEKRLNIAPAIKK 122
F EK + A KK
Sbjct: 259 GKKFDEKEWYVGKAQKK 275
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GG+ T E L + F +YG+V++ +V DR G S+G+GF+ + +E++A++
Sbjct: 58 KLFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAITA 117
Query: 104 SDNIMFKEKRLNIAPA 119
+N+ F + + + A
Sbjct: 118 MNNVEFDGRTIRVDKA 133
>gi|198421765|ref|XP_002125303.1| PREDICTED: similar to tRNA selenocysteine-associated protein 1
(SECp43) [Ciona intestinalis]
Length = 324
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
+FVG + +T T+D+L + F +Y VK KI+ + GIS+GYGF+ F E E KR ++
Sbjct: 97 IFVGDLDATVTDDKLEDFFLKRYRSVKGAKIMYEEGGISRGYGFVRFSDEAEQKRALQEM 156
Query: 105 DNI 107
I
Sbjct: 157 QGI 159
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
+ ++FVGG++ TT+ L E FSQYG V + +V+DR + SKG+GF+TF S +EA
Sbjct: 33 IATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEA 89
>gi|410060051|ref|XP_003949287.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
A1-like [Pan troglodytes]
Length = 184
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 122 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 177
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 34 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 87
>gi|388857223|emb|CCF49236.1| related to SNP1-U1 small nuclear ribonucleoprotein [Ustilago
hordei]
Length = 364
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +F+ ++ TTE +L F YG ++Q+ ++ ++ G S+GY FI ++SE + K KD
Sbjct: 133 KTLFLARLSYDTTEKDLHRQFEVYGPIQQITLIRNKQGKSRGYAFIAYESERDMKAAYKD 192
Query: 104 SDNIMFKEKRLNI 116
++ I +R+ +
Sbjct: 193 AEGIKINGRRVMV 205
>gi|392339470|ref|XP_003753820.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Rattus norvegicus]
Length = 341
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGXKRGFGFVTFDDHD 152
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
>gi|297844820|ref|XP_002890291.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336133|gb|EFH66550.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 18 STQNNAFFNYQAAVNNNAPKYG--TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
S N F +A +NA G ++ P ++FVGG++ T + L E F +G + +
Sbjct: 8 SRAGNIFRQPRALQASNAMLQGNLSLTPSKLFVGGLSPATDVELLKEAFGSFGKIVDAVV 67
Query: 76 VVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPA 119
V+DR +G+S+G+GF+T+DS E+A + N + + ++PA
Sbjct: 68 VLDRESGLSRGFGFVTYDSIEDANNAMQCMHNKELDGRIIGVSPA 112
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G + K+ D +G+SKG+GF+ FDSEE A++ +
Sbjct: 259 IFIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLN 318
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 319 GMLLNDKQVFVGPFVRKQ 336
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELF+Q+G + K++ D G+S+G GF+ F S EEA R + +
Sbjct: 453 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 512
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ M K L +A A +K+
Sbjct: 513 SKMVVSKPLYVALAQRKE 530
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV I+ TE++L +F ++G + V ++ D G SK +GF+ F++ ++A + +
Sbjct: 350 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALN 409
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 410 GQKFDDKEWYVGKAQKK 426
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ +TTE EL E F +YG + + +V D ++G S+G+ F++++SEE+A+ + ++
Sbjct: 119 VFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSYESEEDAREAKDRTNG 178
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPT 134
+ +R+ + +I K+ T G Y PT
Sbjct: 179 MEIDGRRIRVDYSITKRAHTPTPGIYMGRPT 209
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + + +D+L ELFS++G + K++ D +GIS+G GF+ F + EEA R + +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
M K L +A A +K+ + + PV P+
Sbjct: 362 GKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPS 400
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + FS +G + KI D +G SKGYGF+ FD+EE A+ +
Sbjct: 108 IFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLN 167
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++KQ
Sbjct: 168 GMLINDKQVYVGQFLRKQ 185
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ +TTE++L +F ++GI+ V ++ D G SK +GF+ F++ ++A + +
Sbjct: 199 VYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEALN 258
Query: 106 NIMFKEKRLNIAPAIKK 122
F EK + A KK
Sbjct: 259 GKKFDEKEWYVGKAQKK 275
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|225175153|ref|ZP_03729149.1| RNP-1 like RNA-binding protein [Dethiobacter alkaliphilus AHT 1]
gi|225169329|gb|EEG78127.1| RNP-1 like RNA-binding protein [Dethiobacter alkaliphilus AHT 1]
Length = 82
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
+PK ++VG I +TTED+L E FS++G V +I+ +RA G SKGYGF+ E+ K +
Sbjct: 1 MPKTIYVGNIPWSTTEDQLREYFSEHGQVLNARIITERATGRSKGYGFVEVPEEDAEKMI 60
Query: 101 Q 101
+
Sbjct: 61 E 61
>gi|156340877|ref|XP_001620582.1| hypothetical protein NEMVEDRAFT_v1g222953 [Nematostella vectensis]
gi|156205685|gb|EDO28482.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 32 NNNAPKYGTVVPKR-VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFIT 90
N K+ T + K +FV + E E+ ELFS++G+VKQV++V +RAG KGYG++
Sbjct: 100 NQQIDKFPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVE 159
Query: 91 FDSE 94
++ E
Sbjct: 160 YEQE 163
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA-KRLQ 101
K++FVGG+ S+ TE E + F+Q+G++ V ++ D R +G+GFI++DSEE K LQ
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 102 K 102
K
Sbjct: 166 K 166
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T+ED L + F +G V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERV 63
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA-KRLQ 101
K++FVGG+ S+ TE E + F+Q+G++ V ++ D R +G+GFI++DSEE K LQ
Sbjct: 106 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 165
Query: 102 K 102
K
Sbjct: 166 K 166
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T+ED L + F +G V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERV 63
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
+ ++FVGG++ TT+ L E FSQYG V + +V+DR + SKG+GF+TF S +EA
Sbjct: 33 IATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEA 89
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V I + T+DE +LF+ +G V + D+ G S+G+GF+ F + E A + +D +
Sbjct: 217 VYVKNIANEVTDDEFRDLFAAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAVEDLN 276
Query: 106 NIMFKEKRLNIAPAIKKQ 123
N F+ + L + A KK
Sbjct: 277 NKDFRGQDLYVGRAQKKH 294
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 44/87 (50%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + L + F+ +G + K+ D G SKGYGF+ ++++E A + K +
Sbjct: 124 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVN 183
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++ EK++ + I K+ ++ +
Sbjct: 184 GMLLNEKKVYVGHHIPKKDRQSKFEEM 210
>gi|1033165|gb|AAC16917.1| Y-chromosome RNA recognition motif protein, partial [Homo sapiens]
Length = 220
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLHGKAIKVEQAQK 85
>gi|115448273|ref|NP_001047916.1| Os02g0714000 [Oryza sativa Japonica Group]
gi|113537447|dbj|BAF09830.1| Os02g0714000 [Oryza sativa Japonica Group]
gi|215707046|dbj|BAG93506.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 287
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDS 93
A +G +VFVGG+ TT + L + ++G + + ++ DR +G SKGYGF+TF
Sbjct: 28 ASPFGDTTYTKVFVGGLAWETTSERLRRFYDRFGEILEAVVITDRHSGRSKGYGFVTFRD 87
Query: 94 EEEAKRLQKDSDNIMFKEKRLN 115
E A++ +D ++ +R N
Sbjct: 88 PESARKACEDPTPVI-DGRRAN 108
>gi|356531720|ref|XP_003534424.1| PREDICTED: RNA-binding protein 38-like [Glycine max]
Length = 266
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
N A ++G +VFVGG+ T ++ + + F Q+G + + ++ D+A G SKGYGF+TF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTF 64
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLN 115
E A R D ++ +R N
Sbjct: 65 REPEAAMRACVDPAPVI-DGRRAN 87
>gi|302785327|ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
gi|300158033|gb|EFJ24657.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
Length = 642
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F+Q+G + K+ VD +G S+GYGF+ F+ E+ A+ K +
Sbjct: 127 IFIKNLDKSIDNKALYDTFAQFGNILSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVN 186
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ EK++ + P +++Q
Sbjct: 187 GMLLIEKQVFVGPFVRRQ 204
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + T +D+L ELF +G + K++ D G SKG GF+ F + EEA R + +
Sbjct: 321 LYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQGHSKGSGFVAFSTTEEANRAMTEMN 380
Query: 106 NIMFKEKRLNIAPAIKK 122
M K + +A A K+
Sbjct: 381 GRMVANKPIYVALAQKR 397
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + TT+D+L +F ++G + ++ D G SK +GF+ F++ ++A ++ +
Sbjct: 218 VYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAVEELN 277
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 278 GKKMDDKEWYVGRAQKK 294
>gi|302808075|ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
gi|300146641|gb|EFJ13310.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
Length = 635
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F+Q+G + K+ VD +G S+GYGF+ F+ E+ A+ K +
Sbjct: 127 IFIKNLDKSIDNKALYDTFAQFGNILSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVN 186
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ EK++ + P +++Q
Sbjct: 187 GMLLIEKQVFVGPFVRRQ 204
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + T +D+L ELF +G + K++ D G SKG GF+ F + EEA R + +
Sbjct: 321 LYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQGHSKGSGFVAFSTTEEANRAMTEMN 380
Query: 106 NIMFKEKRLNIAPAIKK 122
M K + +A A K+
Sbjct: 381 GRMVANKPIYVALAQKR 397
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + TT+D+L +F ++G + ++ D G SK +GF+ F++ ++A ++ +
Sbjct: 218 VYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAVEELN 277
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 278 GKKMDDKEWYVGRAQKK 294
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|343961425|dbj|BAK62302.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pan troglodytes]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAK 98
++FVGG++ TTE+ L E F++YG + +V ++ D+ G S+G+GF+ +D+ E+AK
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++FVGG+ S TE++ + F QYG V ++++D+ +G +G+GF+TFDSE+
Sbjct: 84 KIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKDSGRPRGFGFVTFDSEQ 135
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
+F+GG+ TT++ L F+Q+G V + ++ D +G S+G+GF+TF
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTF 47
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 121 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 176
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 33 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 86
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 105 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 160
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 17 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 70
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 36 PKYGTVV-PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
PK+ T P+ VFV + + TE ++ LF QYG VK+V++V AG +G+ ++ F++
Sbjct: 774 PKHQTGFDPRTVFVKRLDHSCTEQDVRTLFEQYGAVKEVRMVTTLAGKPRGFAYVEFEAS 833
Query: 95 EEAKRLQKDSDNIMFKEKRLNIA 117
+A + D FK ++L +A
Sbjct: 834 RDAATAIMNLDKAEFKGRQLQVA 856
>gi|297745603|emb|CBI40768.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + + F Q+G + + ++ D+ G SKGYGF+TF
Sbjct: 23 NSP-FGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 81
Query: 93 SEEEAKRLQKDSDNIMFKEKRLNIAPA-IKKQGFTGTYDSLPTVTSPVPPVPTS------ 145
E A+R D I+ +R N A + + + +Y L VT + VP +
Sbjct: 82 DPESARRACLDPAPII-DGRRANCNLASLGRPRPSMSYGRLRPVTPYLGSVPATRGSYVG 140
Query: 146 NMYYHNGLPYTYHNGMAFFPSNGQS 170
N Y + Y+Y G +PS G +
Sbjct: 141 NFGYQQPVSYSYQQGF-MYPSYGNA 164
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 108 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 163
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 20 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 70
>gi|334188244|ref|NP_001190485.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008158|gb|AED95541.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 453
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA-KRLQ 101
K++FVGG+ S+ TE E + F+Q+G++ V ++ D R +G+GFI++DSEE K LQ
Sbjct: 128 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 187
Query: 102 K 102
K
Sbjct: 188 K 188
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T+ED L + F +G V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERV 63
>gi|260812203|ref|XP_002600810.1| hypothetical protein BRAFLDRAFT_229350 [Branchiostoma floridae]
gi|229286100|gb|EEN56822.1| hypothetical protein BRAFLDRAFT_229350 [Branchiostoma floridae]
Length = 477
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 36 PKYGTVVPKR---VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFD 92
P + P+R VFVG + EDEL +F G + +V++++D +G ++GY F+ +
Sbjct: 46 PGWEGPAPQRGCEVFVGKLPRDLYEDELVPVFETIGKIYEVRLMMDFSGSNRGYAFVMYT 105
Query: 93 SEEEAKRLQKDSDNIMFKEKRL 114
++E+AKR K +N ++ RL
Sbjct: 106 NKEDAKRAVKQLNNYEIRKGRL 127
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ TE L E FS+YG V + +V D+ + KG+GF+ F S EEA +++
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTSN 146
+ + + + A +Q D+LP PP P SN
Sbjct: 96 MNGKALNGRVIYVDIAKARQDRAA--DALPIARG--PPKPISN 134
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
>gi|389748929|gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
Length = 682
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + T+D+ ELFSQ+G V I D G SKG+GF+ F++ E+A +
Sbjct: 237 LYVKNLDLEVTQDQFVELFSQFGAVTSAVIQTDEEGKSKGFGFVNFENHEQAAKAVDTLH 296
Query: 106 NIMFKEKRLNIAPAIKK 122
+ F K+L ++ A KK
Sbjct: 297 DTDFNGKKLFVSRAQKK 313
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKG 85
+Y++A KY V +++ + +++L F +G + K++ D G SKG
Sbjct: 323 SYESAKMEKLSKYQGV---NLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRDDKGTSKG 379
Query: 86 YGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
+GF+ F S +EA + + +N M K L ++ A +++
Sbjct: 380 FGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQRRE 417
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 36/64 (56%)
Query: 60 LCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPA 119
L + F+ +G V K+ D G S+GYG++ +++ E A+ K + ++ +K++ +
Sbjct: 158 LHDTFAAFGNVLSCKVATDEQGRSRGYGYVHYETAEAAESAIKAVNGMLLNDKKVYVGYH 217
Query: 120 IKKQ 123
I ++
Sbjct: 218 ISRK 221
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a [Homo
sapiens]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Otolemur
garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK- 102
++F+GG++ +T + L E F +YG V + +++VDR G S+G+GF+TF S EEA +
Sbjct: 41 KLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 103 -DSDNIMFKEKRLNIA 117
D ++ + R+N A
Sbjct: 101 LDGQDLHGRRVRVNYA 116
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 109 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 164
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 71
>gi|255585793|ref|XP_002533576.1| RNA binding protein, putative [Ricinus communis]
gi|223526553|gb|EEF28811.1| RNA binding protein, putative [Ricinus communis]
Length = 284
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQ 101
P ++FVGG+ S T D L FS+YG VK+ IV+D+ G S+G+GF+TF+ A
Sbjct: 5 PSKLFVGGLNSKTDGDYLNLHFSKYGQVKETLIVMDKETGSSRGFGFVTFEDHSAADTAF 64
Query: 102 KDSDNIMFKEKRLNIA 117
+D I+ K+ + A
Sbjct: 65 RDQHFILGKKVDVKWA 80
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEA 97
K++FVGG+ + +E + FS +G V+ ++ + G S+G+GF+TFDSE+ A
Sbjct: 114 KKIFVGGLPHDISNEEFKDFFSTFGTVRDAVVMYNGVTGRSRGFGFVTFDSEDSA 168
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 105 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 160
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 67
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|297805630|ref|XP_002870699.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
gi|297316535|gb|EFH46958.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGGI ++ +DE E F Q+G +K+ +I+ D + G S+G+GF+T++SE+ L
Sbjct: 130 KKIFVGGIPASVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLA 189
Query: 103 DSDNIMFKEKRLNIAPA 119
+ I ++ I A
Sbjct: 190 KGNRIELSGTQVEIKKA 206
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF-DSEEEAKRLQK 102
++FVGG+ TT E + F +YG + I+ DR G +G+GF+T+ DS K +Q
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQ- 101
Query: 103 DSDNIMFKEKRLNIAPAI 120
DN + K++ I I
Sbjct: 102 --DNHIIIGKQVEIKRTI 117
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
[Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|406873754|gb|EKD23843.1| hypothetical protein ACD_81C00167G0002 [uncultured bacterium]
Length = 111
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR 99
K+++VGG+ +TT+D L +LFSQ G V+ I++D+ G SKG+GF+ S++EA++
Sbjct: 3 KKLYVGGLPYSTTQDALNDLFSQAGTVESAMIIIDKMTGRSKGFGFVEMASDDEAEK 59
>gi|302142161|emb|CBI19364.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-K 84
N + NNN K++FVGG++S TE+E F ++G + V ++ D A +
Sbjct: 88 NLDGSGNNN------FTSKKIFVGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPR 141
Query: 85 GYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQ 123
G+GFITF+SEE + + ++ + KR+ + A+ K+
Sbjct: 142 GFGFITFESEESVEHVMQN-NFYELNGKRVEVKRAVPKE 179
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISK-GYGFITFDSEEEAKRLQKD 103
++FVGG++ TE L + FS+YG V + I D + G+GF+TF R +D
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 104 SDNIMFKEKRLNIAPAIKK 122
+ +R+ + A+ K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 95 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 150
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 7 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 60
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 95 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 150
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 60
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 113 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 168
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 25 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 78
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +F+ + + TE +L F YG +++V+IV D+ G S+GY FI ++ E + K K+
Sbjct: 119 KTLFIARLHKSATETDLRREFEGYGTIERVRIVRDKNGRSRGYAFIVYERERDMKAAYKE 178
Query: 104 SDNIMFKEKRL 114
SD + KR+
Sbjct: 179 SDGLHIMGKRI 189
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 118 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 173
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 30 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 83
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ T ED+L E FS YG V Q ++ D+ G +G+GF+ F R+ +D
Sbjct: 7 KLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQD 66
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTS 137
NI +E + A + ++Q +G +L T S
Sbjct: 67 KHNIDTREVDVKRAMSREEQQVSGRTGNLNTSRS 100
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
K++FVGG+ T T++E + F YG V V I+ D+A +G+GF++FDSE+ R+
Sbjct: 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRV 167
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 21 NNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDR 79
N A F+ ++++P Y +FVG + + ++ L E+F ++Y VK K+V+DR
Sbjct: 150 NWATFSSGEKRHDDSPDY------TIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDR 203
Query: 80 A-GISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
G +KGYGF+ F E E R + ++ + + I PA K
Sbjct: 204 TTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNK 247
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAKRLQKD 103
+FVG + + T+ L E F +QY VK K+V D+ + SKGYGF+ F E R +
Sbjct: 175 IFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTE 234
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTV 135
+ ++ + + I PA KQ G + +PT
Sbjct: 235 MNGMICSSRPMRIGPAANKQKANGVQEKVPTA 266
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
+FVGG+ + TED L ++F+ YG V VKI V K GF+ + S A+
Sbjct: 280 IFVGGLDPSATEDVLKQVFTPYGEVVHVKIPV-----GKRCGFVQYASRSSAEE 328
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 21 NNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDR 79
N A F+ ++++P Y +FVG + + ++ L E+F ++Y VK K+V+DR
Sbjct: 150 NWATFSSGEKRHDDSPDY------TIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDR 203
Query: 80 A-GISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
G +KGYGF+ F E E R + ++ + + I PA K
Sbjct: 204 TTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNK 247
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRAGI-SKGYGFITFDSEEEAKRLQKD 103
+FVG + + T+ L E F +QY VK K+V D+ + SKGYGF+ F E R +
Sbjct: 175 IFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTE 234
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTV 135
+ ++ + + I PA KQ G + +PT
Sbjct: 235 MNGMICSSRPMRIGPAANKQKANGVQEKVPTA 266
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR 99
+FVGG+ + TED L ++F+ YG V VKI V K GF+ + S A+
Sbjct: 280 IFVGGLDPSATEDVLKQVFTPYGEVVHVKIPV-----GKRCGFVQYASRSSAEE 328
>gi|222623699|gb|EEE57831.1| hypothetical protein OsJ_08433 [Oryza sativa Japonica Group]
Length = 329
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
V N+ ++G +VFVGG+ T L + F QYG + + ++ DR SKGYGF+
Sbjct: 33 VPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFV 92
Query: 90 TFDSEEEAKRLQKDSD-NIMFKEKRLNIA 117
TF E A+ ++ + I + NIA
Sbjct: 93 TFREPESAREAVRNPNPTIGGRRANCNIA 121
>gi|24639833|ref|NP_511047.2| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|45554213|ref|NP_996353.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|161077571|ref|NP_001096884.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|59800212|sp|Q9W4D2.1|RNP4F_DROME RecName: Full=RNA-binding protein 4F
gi|7290571|gb|AAF46022.1| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|16769448|gb|AAL28943.1| LD32008p [Drosophila melanogaster]
gi|45446810|gb|AAS65263.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|158031720|gb|ABW09340.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|220947218|gb|ACL86152.1| Rnp4F-PA [synthetic construct]
gi|220956760|gb|ACL90923.1| Rnp4F-PA [synthetic construct]
Length = 941
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 2 SGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELC 61
S PS G+++P S NA A +N + ++FV + +++EL
Sbjct: 687 SRTEPSGGATSPPSKVKGPANA-----EAKESNFKYSPNMEINKIFVRNLHPACSKEELH 741
Query: 62 ELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIK 121
ELFS +G +K V++V KG ++ F+ EA+R D +FK +NI+ AI
Sbjct: 742 ELFSPFGTIKDVRLVHKLNKQFKGIAYVEFEKPGEAQRAVAGRDGCLFKG--MNISVAIS 799
Query: 122 KQGFTGTYDSLPTVTSPVPPVPTS 145
GT P+V +P VPTS
Sbjct: 800 NPPPRGTSAVKPSV-APKRRVPTS 822
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|408792487|ref|ZP_11204097.1| hypothetical protein LEP1GSC017_0784 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408463897|gb|EKJ87622.1| hypothetical protein LEP1GSC017_0784 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 87
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDS 104
++VG ++ TE++L ELFS +G V KI+ D+ G SKG+GFI EA D
Sbjct: 5 IYVGNLSYEMTENKLNELFSAHGAVSSAKIITDQYTGGSKGFGFIEMKERREADNAINDL 64
Query: 105 D--NIMFKEKRLNIAP 118
+ NI+ +E ++NIA
Sbjct: 65 NGKNILNREMKVNIAK 80
>gi|357138050|ref|XP_003570611.1| PREDICTED: uncharacterized protein LOC100846923 [Brachypodium
distachyon]
Length = 315
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++G +VFVGG+ T L + F +YG + + ++ DR G SKGYGF+TF E
Sbjct: 33 RFGDTTLTKVFVGGLAWETPSTGLHDHFREYGEILEAVVITDRETGRSKGYGFVTFRDPE 92
Query: 96 EAKR-LQKDSDNIMFKEKRLNIA 117
A++ +Q + I + NIA
Sbjct: 93 SARQAVQNPNPVIAGRRANCNIA 115
>gi|2582672|emb|CAA75535.1| RNA binding protein [Drosophila melanogaster]
Length = 943
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 2 SGAHPSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELC 61
S PS G+++P S NA A +N + ++FV + +++EL
Sbjct: 689 SRTEPSGGATSPPSKVKGPANA-----EAKESNFKYSPNMEINKIFVRNLHPACSKEELH 743
Query: 62 ELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIK 121
ELFS +G +K V++V KG ++ F+ EA+R D +FK +NI+ AI
Sbjct: 744 ELFSPFGTIKDVRLVHKLNKQFKGIAYVEFEKPGEAQRAVAGRDGCLFKG--MNISVAIS 801
Query: 122 KQGFTGTYDSLPTVTSPVPPVPTS 145
GT P+V +P VPTS
Sbjct: 802 NPPPRGTSAVKPSV-APKRRVPTS 824
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + T+D+L ELFS++G + K++ D G+SKG GF+ + + EEA + + +
Sbjct: 313 LYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMN 372
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 373 GKMIVSKPLYVALAQRKE 390
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + L + FS +G + K+ D AG S GYGF+ FD+EE AK +
Sbjct: 119 IYIKNLDKAIDNKALHDTFSAFGNILSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLN 178
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P +++Q
Sbjct: 179 GMLLNDKQVYVGPFLRRQ 196
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TTTE++L ++F +YG + ++ D G S+ +GF+ F++ ++A R + +
Sbjct: 210 VYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFENPDDAARSVEALN 269
Query: 106 NIMFKEKRLNIAPAIKK 122
F EK + A KK
Sbjct: 270 GKTFDEKEWYVGKAQKK 286
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
+++FVGG+ ST TE E F Q+G + V ++ D + +G+GFIT+DSEE +++
Sbjct: 106 RKIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKV 163
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI+ T ED L E F+ YG V + I+ DR G +G+GFI F A R+ ++
Sbjct: 7 KLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE 66
Query: 104 SDNI---MFKEKR 113
NI M + KR
Sbjct: 67 KHNIDGRMVEAKR 79
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P+ + N A+ +N+ + G V P R++VG + TE+ L +F +G + ++++
Sbjct: 224 PTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNITEEMLKGIFEPFGKIDKIEL 283
Query: 76 VVD-RAGISKGYGFITFDSEEEAKR 99
+ D SKGYGFITF E+AK+
Sbjct: 284 IKDMETNRSKGYGFITFHDSEDAKK 308
>gi|357017421|gb|AET50739.1| hypothetical protein [Eimeria tenella]
Length = 374
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDS 104
++F+GGITS+ TE+ L + F Q+G +++ I+ D +G S+G+GF+ F S + S
Sbjct: 199 KIFIGGITSSITEEILQQHFEQFGSIEKATIIRDGSGKSRGFGFVQFTSVDSVAVAVGAS 258
Query: 105 DNIMFKEKRLNIAPAIKKQGFT---GTYDSLPTVTSPVPPVPTSNMYYHNGLPYTYHNGM 161
+ + + R++ PA + G Y + P Y PY YH
Sbjct: 259 PHQLDADNRVDAQPAQDRGARRLPGGRYTTSPYYEQ---GYYGYGSYGAAAGPYGYHAAA 315
Query: 162 AFFP 165
A+ P
Sbjct: 316 AYSP 319
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S E
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAE 62
>gi|226528122|ref|NP_001150704.1| LOC100284337 [Zea mays]
gi|195641226|gb|ACG40081.1| RNA-binding region-containing protein 1 [Zea mays]
Length = 283
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 26/126 (20%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
+VFVGG+ T+ D L + ++G + + ++ DR +G SKGYGF+TF E A + +D
Sbjct: 33 KVFVGGLAWETSSDRLRRFYERFGDILEAVVITDRHSGRSKGYGFVTFREAESASKACED 92
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPP-----------VPTSNMYYHNG 152
++ +R N A SL PVPP VP +Y G
Sbjct: 93 PTPVI-DGRRANCNLA-----------SLGRAQHPVPPGRPRSAGSYLGVPVPKAFYLGG 140
Query: 153 LPYTYH 158
Y++H
Sbjct: 141 --YSHH 144
>gi|4836901|gb|AAD30604.1|AC007369_14 Unknown protein [Arabidopsis thaliana]
Length = 288
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + L F QYG + + ++ D+ G SKGYGF+TF
Sbjct: 15 NSP-FGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFR 73
Query: 93 SEEEAKRLQKDSDNIMFKEKRLN 115
E A+R D I+ +R N
Sbjct: 74 DPEAARRACVDPTPII-DGRRAN 95
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV + +TEDEL ELF YG + + + VD G +KG+GF+ F ++A + + +
Sbjct: 235 VFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGHNKGFGFVNFAEHDDAVKAVEALN 294
Query: 106 NIMFKEKRLNIAPAIKK 122
+ +K K L + A KK
Sbjct: 295 DKEYKGKPLYVGRAQKK 311
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 43/87 (49%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L + FS +G V K+ D G SKG+GF+ ++S+E A+ ++ +
Sbjct: 142 IFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDENGNSKGFGFVHYESDEAAQAAIENIN 201
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++ + + + P + K+ + +
Sbjct: 202 GMLLNGREIYVGPHLAKKDRESRFQEM 228
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
Y+A KY +V +F+ + + + L E F +G + K+++D G S+G+
Sbjct: 322 YEADRLEKLQKYQSV---NLFIKNLDESIDDARLEEEFKPFGTITSAKVMLDENGKSRGF 378
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPA 119
GF+ + EEA + + + M K L +A A
Sbjct: 379 GFVCLSTPEEATKAISEMNQRMVANKPLYVALA 411
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 31/119 (26%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL---- 100
++VG + T TE +L E FS G V +++ D S GYG++ F S+ +R
Sbjct: 54 LYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALEEL 113
Query: 101 ---------------QKD-------SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTS 137
Q+D S NI K N+ PAI+ + T+ S V S
Sbjct: 114 NYAEIKGVRCRLMWSQRDPSLRRSGSGNIFIK----NLDPAIENKTLHDTFSSFGKVLS 168
>gi|212550891|ref|YP_002309208.1| RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549129|dbj|BAG83797.1| putative RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 98
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDS 104
+F+ G++ +D+L LF YG V ++++DR SKGYGF+ + +EEA++ +
Sbjct: 3 IFIAGLSFRLNDDDLKNLFESYGTVSSARVIIDRQTSRSKGYGFVEMEDDEEARKAIAEL 62
Query: 105 DNIMFKEKRLNIA---PAIKKQGF 125
+ F E+ ++++ P K+ GF
Sbjct: 63 NGSEFDERTISVSEARPKEKRSGF 86
>gi|356544316|ref|XP_003540599.1| PREDICTED: RNA-binding protein 38-like [Glycine max]
Length = 267
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
N A ++G +VFVGG+ T ++ + + F Q+G + + ++ D+A G SKGYGF+TF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTF 64
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLN 115
E A R D ++ +R N
Sbjct: 65 REPEAAMRACVDPAPVI-DGRRAN 87
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAK 98
++FVGG++ TTE+ L E F++YG + +V ++ D+ G S+G+GF+ +D+ E+AK
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKR 99
V +VF+GG+ T+EDE+ + FS +G VK V+++ D+ +G+GF+TF+++E K+
Sbjct: 98 VNTNKVFIGGVAQNTSEDEIKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETVKK 157
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFD 92
++FVGG+ T D + + F++YG V I D S+G+GF+TF+
Sbjct: 9 KIFVGGLHPDTDSDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFE 57
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSE 94
V R FVGG+ TT+ L E FSQYG + KI+ DR G S+G+GF+TF++E
Sbjct: 5 VEYRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNE 58
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
++FVGGI TE E + F+QYG + +++VD+ G S+G+GFIT+DS + R+
Sbjct: 257 KIFVGGIDPLVTEKEFYDFFAQYGSIIDAQLMVDKDTGRSRGFGFITYDSPDAVDRV 313
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDS 93
++FVGG+ TTE+ L + FS+YG V I+ D A G S+G+GF+TF+
Sbjct: 173 KMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFED 222
>gi|322701255|gb|EFY93005.1| pre-mRNA splicing factor (Prp24), putative [Metarhizium acridum
CQMa 102]
Length = 1053
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 37 KYGTVVPKR-VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
+ G + +R V + + +TTE E+ +FSQ+G VK+V I ++ AG ++G+ F+ F+S++
Sbjct: 764 REGAIAERREVHISNLDLSTTEAEIRSVFSQFGTVKRVNIPLNMAGKNRGFAFLDFESKD 823
Query: 96 EAKRLQKDSDNIMFKEKRLNI 116
+A++ + +N FK + L +
Sbjct: 824 QAEKAVAELNNTKFKSQILKV 844
>gi|359491921|ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
Length = 346
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + + F Q+G + + ++ D+ G SKGYGF+TF
Sbjct: 23 NSP-FGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFR 81
Query: 93 SEEEAKRLQKDSDNIM-FKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPTS------ 145
E A+R D I+ + N+A ++ + + +Y L VT + VP +
Sbjct: 82 DPESARRACLDPAPIIDGRRANCNLA-SLGRPRPSMSYGRLRPVTPYLGSVPATRGSYVG 140
Query: 146 NMYYHNGLPYTYHNGMAFFPSNG 168
N Y + Y+Y G +PS G
Sbjct: 141 NFGYQQPVSYSYQQGF-MYPSYG 162
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 30 AVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRA-GISKGYG 87
+ P+ G P +FVG + S T+ L E F S+Y VK K+V DR G SKGYG
Sbjct: 160 GIGEKRPEMGPDYP--IFVGDLASDVTDYLLQETFRSRYQTVKGAKVVSDRVTGRSKGYG 217
Query: 88 FITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPP 141
F+ F E E R + + + + + PA K+ TG P + VPP
Sbjct: 218 FVRFGDENEQVRAMTEMNGMFCSSRPMRTGPATTKKT-TGFQQPYPKAAAAVPP 270
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEE 95
R FVGG+ T ++ L + FSQYG + KI+ DR G S+G+GF+TF SEE
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEE 58
>gi|354471857|ref|XP_003498157.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Cricetulus griseus]
gi|344236498|gb|EGV92601.1| MKI67 FHA domain-interacting nucleolar phosphoprotein [Cricetulus
griseus]
Length = 321
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVV-DRAGISKGYGFITFDSEE 95
K G++ P +F+G + ST +E + + F+Q+G + + ++ R G S+GY F+ F+SE+
Sbjct: 38 KEGSLNPGVIFLGHLPSTLSETHIYDYFTQFGTISRFRLSRSKRTGNSRGYAFVEFESED 97
Query: 96 EAKRLQKDSDNIMFKEKRLN 115
AK + + DN +F E+ L+
Sbjct: 98 VAKIVAETMDNYLFGERLLS 117
>gi|238006540|gb|ACR34305.1| unknown [Zea mays]
gi|413938540|gb|AFW73091.1| RNA-binding region-containing protein 1 [Zea mays]
Length = 283
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 26/126 (20%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
+VFVGG+ T+ D L + ++G + + ++ DR +G SKGYGF+TF E A + +D
Sbjct: 33 KVFVGGLAWETSSDRLRRFYERFGDILEAVVITDRHSGRSKGYGFVTFREAESASKACED 92
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPP-----------VPTSNMYYHNG 152
++ +R N A SL PVPP VP +Y G
Sbjct: 93 PTPVI-DGRRANCNLA-----------SLGRAQHPVPPGRPRSAGSYLGVPVPKAFYLGG 140
Query: 153 LPYTYH 158
Y++H
Sbjct: 141 --YSHH 144
>gi|218191605|gb|EEC74032.1| hypothetical protein OsI_08988 [Oryza sativa Indica Group]
Length = 322
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
V N+ ++G +VFVGG+ T L + F QYG + + ++ DR SKGYGF+
Sbjct: 33 VPNHRTRFGDTTLTKVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFV 92
Query: 90 TFDSEEEAKRLQKDSD-NIMFKEKRLNIA 117
TF E A+ ++ + I + NIA
Sbjct: 93 TFREPESAREAVRNPNPTIGGRRANCNIA 121
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GGI+ T ++ L E F +YG V + +I++DR G S+G+GF+T+ S EEA +
Sbjct: 41 KIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQA 100
Query: 104 SDNIMFKEKRLNIAPAIKK 122
D +R+ + A ++
Sbjct: 101 MDGQDLHGRRVRVNYATER 119
>gi|443916694|gb|ELU37670.1| subunit of cleavage factor I [Rhizoctonia solani AG-1 IA]
Length = 435
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+++FVGG+ ST T + + FSQYG V ++VDR + SKG+GF+TF+ ++ +L
Sbjct: 287 QKLFVGGLASTVTSESMRNFFSQYGKVIDANVMVDRDSSRSKGFGFVTFEDQDGVDKL 344
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
K++FVGGI ++TTE L + F +YG V++V ++ DR +G+GF+ FD+E+
Sbjct: 110 KKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEK 162
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 15 SPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVK 74
PSS QN A ++A G P ++FVGG++ T+ D L + F Q+G VK+
Sbjct: 2 DPSSQQN--------ATTHDAD--GNHDPGKMFVGGLSWETSTDGLRKYFCQFGEVKECV 51
Query: 75 IVVDRAG-ISKGYGFITF 91
I+ D S+G+GF+TF
Sbjct: 52 IMRDTTTRRSRGFGFVTF 69
>gi|357470723|ref|XP_003605646.1| RNA-binding protein [Medicago truncatula]
gi|355506701|gb|AES87843.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
N A ++G +VFVGG+ T ++ + + F Q+G + + ++ D+A G SKGYGF+TF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTF 64
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLN 115
+ A R D+ I+ +R N
Sbjct: 65 REPDAAMRACVDAAPII-DGRRAN 87
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + ++ L LFS++G + K VV+ G SKGYGF+ FDSE+ A +
Sbjct: 109 LYVKNLDASIDSAGLQSLFSKFGTILSCK-VVEEHGKSKGYGFVQFDSEDSALAARTALH 167
Query: 106 NIMFKEKRLNIAPAIKKQGFT--GTYDSL 132
+ M KEK+L ++ +KK T +YD L
Sbjct: 168 DTMLKEKKLYVSRFVKKSERTTATSYDEL 196
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + D+L ELFS G + K++ G S+G+GF+ F S EEAK+ +
Sbjct: 304 LYVKNLALCIDNDKLQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALN 363
Query: 106 NIMFKEKRLNIAPA---IKKQGFTGTYDSLP-------TVTSPVPPVPTSNMYYHNGLPY 155
+F+ K L +A A +Q TY S+P + +S VPP P S +YY N PY
Sbjct: 364 GAVFQGKSLYVAMAQCKRDRQLALQTYFSVPQSQPPYLSDSSVVPP-PISPVYY-NFYPY 421
Query: 156 T 156
+
Sbjct: 422 S 422
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
A Y + ++V ++ T+D +FS +G + I+ D G S+G+GF+ F+S
Sbjct: 190 ATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSRGFGFVDFESP 249
Query: 95 EEAKRLQKDSDNIMFKEKRLNI----APAIKKQGFTGTYDSLPTVTSPVPPVPTSNMYYH 150
E+AK+ + + + L + A A +K+ Y + + + SN+Y
Sbjct: 250 EDAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEYKDI--FNTHMEKFKASNLYVK 307
Query: 151 N 151
N
Sbjct: 308 N 308
>gi|448089233|ref|XP_004196749.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|448093471|ref|XP_004197780.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359378171|emb|CCE84430.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359379202|emb|CCE83399.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K VF+ + + TE ++ + S+YG++ ++I+ DR G S+GYGF+ F+ E +AK K+
Sbjct: 114 KTVFLARLDYSLTELDISKHVSKYGVIDSIRIIRDREGRSRGYGFVAFERESDAKNCVKE 173
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFD 92
++F+GG+ TTED+L + FS+YG V +KI+ D A G S+G+GF+TF+
Sbjct: 194 KLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFE 242
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI E E F+Q+G + ++++D+ G S+G+GFIT+DS E R+ ++
Sbjct: 278 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSSEAVDRVCQN 337
Query: 104 SDNIMFKEKRLNIAPA 119
I FK K++ I A
Sbjct: 338 K-YIDFKGKQIEIKRA 352
>gi|260948938|ref|XP_002618766.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
gi|238848638|gb|EEQ38102.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
Length = 633
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
R+FV I + ED+ ELFSQYG +K+V I VD R G SKGY ++ F++ E+A
Sbjct: 104 RLFVRNILYDSKEDDFRELFSQYGPLKEVHIAVDTRTGKSKGYVYVQFNNNEDA 157
>gi|198428311|ref|XP_002127222.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 359
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+++FVGGI TT+D + FS+YG V ++ D G SKG+GF+TF++EEEA D
Sbjct: 13 RKLFVGGINHDTTDDGMSAYFSKYGNVTDCVVIRDN-GRSKGFGFVTFETEEEADACMDD 71
>gi|114691962|ref|XP_001136007.1| PREDICTED: similar to RBMY1A1 protein isoform 2 [Pan troglodytes
verus]
Length = 390
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG V ++I+ DR +G +G+GF TFD +
Sbjct: 203 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHD 258
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 115 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 165
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GG+ TT+D L E FS+YG +++ +V DR S+G+GF+ F SE EA
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 104 SDNIMFKEK--RLNIA---PAIKKQGFTG 127
+N F + R++ A PA + GF G
Sbjct: 63 MNNQEFDGRIIRVDKASERPAARNGGFQG 91
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
+V+VG ++ +TT+D L E FS+YG V ++ DR G S+G+GF+TF SE+EA+
Sbjct: 4 KVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAE 58
>gi|430814566|emb|CCJ28224.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 685
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V I +E E ELF ++G V + + VD G S+G+GF+ +++ E+A R ++
Sbjct: 249 VYVKNIDPEISEAEFEELFKKFGNVTSLSLSVDENGKSRGFGFVNYENHEDAARAVEELH 308
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ +K+++L + A KK
Sbjct: 309 DTEYKDRKLYVCRAQKKH 326
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
Y+ A + KY + +FV + ++ L + FS YG + KI+VD G SKG+
Sbjct: 336 YEQAKLDKLNKYNGI---NLFVKNLDDDIDDERLRQEFSIYGTITSAKIMVDDNGKSKGF 392
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPT------VTSPVP 140
GF+ F S +EA + + + M K L +A A +K +S +
Sbjct: 393 GFVCFSSPDEATKAITEMNQRMVSGKPLYVALAQRKDVRRSQLESQINARNQLRIQQQAA 452
Query: 141 PVPTSNMYYHNGLPYTYHNG-MAFFPSNGQ----------SMVPTSPPTVPTQ 182
S Y G P Y G F P+ +MVP+ P VP Q
Sbjct: 453 AAGMSPQYGMPGAPMFYGQGPTGFMPAGPMTDRGMPFPQPAMVPSRPRWVPQQ 505
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 18/110 (16%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAK------- 98
VF+ + ++ L + F+ +G + K+ VD G SKGYGF+ + + E A+
Sbjct: 166 VFIKNLDASIDNKALHDTFTAFGSILSCKVAVDELGNSKGYGFVHYKTSESAEAAIKHVY 225
Query: 99 ---RLQKDSDNIMFKEKRL--------NIAPAIKKQGFTGTYDSLPTVTS 137
+ K F + +L NI P I + F + VTS
Sbjct: 226 VGHHVSKKDRQSKFDDMKLKFTNVYVKNIDPEISEAEFEELFKKFGNVTS 275
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P+ + N A+ +N+ + G V P R++VG + TE+ L +F +G + ++++
Sbjct: 212 PTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNITEEMLKGIFEPFGKIDKIEL 271
Query: 76 VVD-RAGISKGYGFITFDSEEEAKR 99
+ D SKGYGFITF E+AK+
Sbjct: 272 IKDMETNRSKGYGFITFHDSEDAKK 296
>gi|18394923|ref|NP_564127.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334182725|ref|NP_001185049.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191914|gb|AEE30035.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191915|gb|AEE30036.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 274
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + L F QYG + + ++ D+ G SKGYGF+TF
Sbjct: 15 NSP-FGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFR 73
Query: 93 SEEEAKRLQKDSDNIMFKEKRLN 115
E A+R D I+ +R N
Sbjct: 74 DPEAARRACVDPTPII-DGRRAN 95
>gi|357470725|ref|XP_003605647.1| RNA-binding protein [Medicago truncatula]
gi|355506702|gb|AES87844.1| RNA-binding protein [Medicago truncatula]
Length = 267
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
N A ++G +VFVGG+ T ++ + + F Q+G + + ++ D+A G SKGYGF+TF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTF 64
Query: 92 DSEEEAKRLQKDSDNIMFKEKRLN 115
+ A R D+ I+ +R N
Sbjct: 65 REPDAAMRACVDAAPII-DGRRAN 87
>gi|327273505|ref|XP_003221521.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 47-like [Anolis
carolinensis]
Length = 603
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 6 PSEGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPK----------RVFVGGITSTT 55
P E ++ P+ P+ Q Y N KYG P VFVG I
Sbjct: 25 PEELANVPNGPALIQLMERTGYNLVQENGQRKYGGPPPGWEGLHPPRGCEVFVGKIPRDV 84
Query: 56 TEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRL 114
EDEL +F G + ++++++D G ++GY F+ + + EAKR K+ +N + RL
Sbjct: 85 YEDELVPVFETAGRIYEMRLMMDFDGKNRGYAFVMYTQKYEAKRAVKELNNYEIRPGRL 143
>gi|225458908|ref|XP_002283509.1| PREDICTED: uncharacterized protein LOC100255821 [Vitis vinifera]
Length = 471
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-K 84
N + NNN K++FVGG++S TE+E F ++G + V ++ D A +
Sbjct: 88 NLDGSGNNN------FTSKKIFVGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPR 141
Query: 85 GYGFITFDSEEEAKRLQKDSDNIMFKE---KRLNIAPAIKKQ 123
G+GFITF+SEE + + +++ F E KR+ + A+ K+
Sbjct: 142 GFGFITFESEESVEHVMQNN----FYELNGKRVEVKRAVPKE 179
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISK-GYGFITFDSEEEAKRLQKD 103
++FVGG++ TE L + FS+YG V + I D + G+GF+TF R +D
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 104 SDNIMFKEKRLNIAPAIKK 122
+ +R+ + A+ K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
>gi|219519651|gb|AAI44423.1| Unknown (protein for MGC:177960) [Homo sapiens]
Length = 459
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGTSLHGKAIKVEQAKK 85
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDS 93
++F+GG+ TTE+ L + FS+YG V +VKI+ D A G S+G+GF+TF++
Sbjct: 187 KMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFEN 236
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI E E FSQ+G + ++++D+ G S+G+GFIT+D+ + R+ ++
Sbjct: 271 KIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCQN 330
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
I FK K++ I A +Q
Sbjct: 331 K-FIEFKGKQIEIKRAEPRQ 349
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + T T+++L ELF+++G + K++ D +G SKG GF+ F + EA R+ + +
Sbjct: 325 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 384
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 385 GKMVGGKPLYVALAQRKE 402
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TT+DEL F QYG + ++ D G S+ +GF+ F++ E+A R + +
Sbjct: 222 VYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALN 281
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 282 GKKFDDKEWYVGKAQKK 298
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + L E FS G + K+ D G S+GYGF+ FD+E+ AK + +
Sbjct: 131 LFVKNLDKSVDNKTLHETFSGCGTIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLN 190
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
+ +K++ + P ++K+ D +
Sbjct: 191 GKVLNDKQIFVGPFLRKEERESAADKM 217
>gi|147795790|emb|CAN67607.1| hypothetical protein VITISV_004303 [Vitis vinifera]
Length = 507
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 26 NYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-K 84
N + NNN K++FVGG++S TE+E F ++G + V ++ D A +
Sbjct: 88 NLDGSGNNN------FTSKKIFVGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPR 141
Query: 85 GYGFITFDSEEEAKRLQKDSDNIMFKE---KRLNIAPAIKKQ 123
G+GFITF+SEE + + +++ F E KR+ + A+ K+
Sbjct: 142 GFGFITFESEESVEHVMQNN----FYELNGKRVEVKRAVPKE 179
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISK-GYGFITFDSEEEAKRLQKD 103
++FVGG++ TE L + FS+YG V + I D + G+GF+TF R +D
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 104 SDNIMFKEKRLNIAPAIKK 122
+ +R+ + A+ K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSE 94
V R FVGG+ TT+ L E FSQYG V + KI+ DR G S+G+GF+TF E
Sbjct: 4 VEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDE 57
>gi|357447963|ref|XP_003594257.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483305|gb|AES64508.1| RNA-binding protein, putative [Medicago truncatula]
Length = 411
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 34 NAPKYGTVVP-----KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYG 87
N+ +G+ P K++FVGG+ ST TE + F Q+G + V ++ D +G+G
Sbjct: 21 NSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFG 80
Query: 88 FITFDSEEEAKRL 100
FIT+DSEE +++
Sbjct: 81 FITYDSEEAVEKV 93
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K V+V G++ TT+++L +F YG V V++V D+ G SKG+ F+ F+SE A+
Sbjct: 807 KEVYVAGLSKYTTKEDLKGVFKTYGTVNDVRLVTDKNGQSKGFAFVEFESETSAQA-ALS 865
Query: 104 SDNIMFKEKRLNIAPA 119
++N + +R+ + A
Sbjct: 866 ANNYELRSRRIAVTLA 881
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
V R FVGG+ T + L FSQYG + + KI+ DR G S+G+GF+TF SE+ K
Sbjct: 42 VEYRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMK 99
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR 99
+ P ++F+GG+ TT+D L E FSQ+G +++ +V DR S+G+GF+ F SE EA
Sbjct: 1 MAPPKLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADA 60
Query: 100 LQKDSDNIMFKEKRLNIAPAIK 121
+N F + + + A +
Sbjct: 61 ALNAMNNQEFDGRVIRVDKATE 82
>gi|270014286|gb|EFA10734.1| transformer2, partial [Tribolium castaneum]
Length = 670
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTEDEL +FS+YG +++V++V+D + G S+G+ F+ F++ ++AK +
Sbjct: 160 VFGLSVYTTEDELYHIFSKYGPLERVQVVIDAKTGRSRGFSFVYFENTDDAKVAKDQCSG 219
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPT 134
+ K + + +I ++ T G Y PT
Sbjct: 220 MKINGKNIRVDYSITERAHTPTPGIYMGKPT 250
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 10 SSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGI 69
S NP + T + + + + G V R+FV + T TED+L +LF +G+
Sbjct: 300 SENPKRNAQTADGGHSDNEGDEEEEEEESGLSV-GRLFVRNLPYTCTEDDLRDLFGSFGM 358
Query: 70 VKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
+ +V + VD KG+ F+ F E+A + + D F + L+I PA ++ G +G
Sbjct: 359 LSEVHLPVDDVKKGKGFAFVQFVIPEDAGKALEQLDRHAFHGRLLHIIPARRQPGSSGAE 418
Query: 130 DS 131
S
Sbjct: 419 AS 420
>gi|34303937|ref|NP_689798.1| RNA-binding motif protein, Y chromosome, family 1 member F/J [Homo
sapiens]
gi|56090529|ref|NP_001006117.2| RNA-binding motif protein, Y chromosome, family 1 member F/J [Homo
sapiens]
gi|166199747|sp|Q15415.2|RBY1F_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member F/J; AltName: Full=Y chromosome RNA recognition
motif 2
gi|20987385|gb|AAH30018.1| RNA binding motif protein, Y-linked, family 1, member F [Homo
sapiens]
gi|123980592|gb|ABM82125.1| RNA binding motif protein, Y-linked, family 1, member F [synthetic
construct]
gi|123995413|gb|ABM85308.1| RNA binding motif protein, Y-linked, family 1, member F [synthetic
construct]
gi|151555057|gb|AAI48577.1| RNA binding motif protein, Y-linked, family 1, member J [synthetic
construct]
gi|187956669|gb|AAI52393.1| RBMY1F protein [Homo sapiens]
gi|189069331|dbj|BAG36363.1| unnamed protein product [Homo sapiens]
gi|208967362|dbj|BAG73695.1| RNA binding motif protein, Y-linked, family 1, member F [synthetic
construct]
Length = 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGTSLHGKAIKVEQAKK 85
>gi|187955032|gb|AAI46854.1| RNA binding motif protein, Y-linked, family 1, member A1 [Homo
sapiens]
gi|219841952|gb|AAI44578.1| RNA binding motif protein, Y-linked, family 1, member B [Homo
sapiens]
Length = 496
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGTSLHGKAIKVEQAKK 85
>gi|187281373|ref|NP_001119707.1| transformer 2 isoform C [Bombyx mori]
gi|61583221|gb|AAX47001.1| transformer-2 protein C [Bombyx mori]
Length = 269
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTE ++ +FS+YG V +V++V+D + G S+G+ F+ F+ E+AK + +
Sbjct: 114 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 173
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPTVTS 137
+ +R+ + +I ++ T G Y PT++S
Sbjct: 174 MEIDGRRIRVDYSITQRAHTPTPGIYMGKPTISS 207
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ T T+DEL E+F +YG + ++ D G S+ +GF+ F++ + A + ++ +
Sbjct: 216 VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELN 275
Query: 106 NIMFKEKRLNIAPAIKK 122
+F +K L + A KK
Sbjct: 276 GKIFNDKELYVGRAQKK 292
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + +++L ELF++YG + K++ D G+S+G GF+ F S E+A R + +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
M K L +A A +K+ + + PV P+
Sbjct: 379 GKMVGSKPLYVALAQRKEDRKAKLQAQFSQMRPVAMAPS 417
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F +G + KI D +G S+GYGF+ F+ +E A+ +
Sbjct: 125 IFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLN 184
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 185 GMLINDKKVFVGPFVRKQ 202
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
K++FVGGI ++TTE L + F +YG V++V ++ DR +G+GF+ FD+E+
Sbjct: 110 KKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEK 162
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 15 SPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVK 74
PSS QN A ++A G P ++FVGG++ T+ D L + F Q+G VK+
Sbjct: 2 DPSSQQN--------ATTHDAD--GNHDPGKMFVGGLSWETSTDGLRKYFCQFGEVKECV 51
Query: 75 IVVDRAG-ISKGYGFITF 91
I+ D S+G+GF+TF
Sbjct: 52 IMRDTTTRRSRGFGFVTF 69
>gi|385303294|gb|EIF47378.1| subunit of cleavage factor i, partial [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI T E + F Q+G + ++++D+ G S+GYGF+T+DS + R+ ++
Sbjct: 84 KIFVGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKDTGKSRGYGFVTYDSADAVARVTRN 143
Query: 104 SDNIMFKEKRLNIAPA 119
+MF +++ I A
Sbjct: 144 K-YVMFHGRQMEIKKA 158
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
+F+GG+T T E+ L + F Q+G V ++ I+ D A G S+G+ F+TF
Sbjct: 1 MFIGGLTWETDEESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTF 47
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
++F+GG+ TTED L + FS+YG V +KI+ D A G S+G+GF+TF
Sbjct: 209 KMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTF 256
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI E E FSQ+G + ++++D+ G S+G+GFIT+D+ + R+ ++
Sbjct: 293 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCEN 352
Query: 104 SDNIMFKEKRLNIAPA 119
I FK KR+ I A
Sbjct: 353 K-FIEFKGKRIEIKRA 367
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS---KGYGFITFDSEEEAKRL 100
K++FVGG+ T TED+ F Q+G + V ++ D IS +G+GFITFDSEE ++
Sbjct: 104 KKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVMYDH--ISQRPRGFGFITFDSEEAVDKV 161
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
+VF+GGI+ TTE+ L E F YG V + I+ D+ G ++G+GFI F R+ +D
Sbjct: 7 KVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDRVLQD 66
Query: 104 SDNIMFKEKRLNIA 117
I ++ L A
Sbjct: 67 KHTIDGRQVELKRA 80
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 29 AAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYG 87
AA+ NN K G+ P R++VG + TED L +F +G ++ +++++D G SKGYG
Sbjct: 235 AAMANNLQK-GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 293
Query: 88 FITFDSEEEAKR 99
FITF E AK+
Sbjct: 294 FITFSDSECAKK 305
>gi|294897114|ref|XP_002775830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882183|gb|EER07646.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 323
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
+ G P +VF GG+ ST + + L + FSQYG + + DR G SKGYGF+TFDSE+
Sbjct: 175 RRGGDDPMKVFCGGLQSTLSSERLRQHFSQYGNIVDCIAMRDRDTGRSKGYGFVTFDSED 234
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
+++FVGGI T+D + FSQ+G V++ ++ D+ G +G+GF+T+ + +E +
Sbjct: 78 RQLFVGGIPEGITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVE 133
>gi|219363281|ref|NP_001136575.1| hypothetical protein [Zea mays]
gi|194696232|gb|ACF82200.1| unknown [Zea mays]
gi|413956076|gb|AFW88725.1| hypothetical protein ZEAMMB73_158124 [Zea mays]
Length = 279
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEE 96
+G +VFVGG+ T E L F +YG + + I+ D+ G SKGYGF+TF +
Sbjct: 19 FGDTTLTKVFVGGLAWETHEGALRGHFQRYGDILEAVIISDKLTGRSKGYGFVTFKEADA 78
Query: 97 AKRLQKDSDNIMFKEKRLN 115
AK+ +D+ ++ +R N
Sbjct: 79 AKKACEDATPVI-NGRRAN 96
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 30 AVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGF 88
AV AP K++F+GG+++ T+E+++ + FSQ+G + + ++ D+A +G+GF
Sbjct: 75 AVPKRAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGF 134
Query: 89 ITFDSEEEAKR 99
+TF+SE A +
Sbjct: 135 VTFESENSADK 145
>gi|187281361|ref|NP_001119705.1| transformer 2 isoform A [Bombyx mori]
gi|61583219|gb|AAT42220.2| transformer-2 protein A [Bombyx mori]
Length = 284
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTE ++ +FS+YG V +V++V+D + G S+G+ F+ F+ E+AK + +
Sbjct: 129 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 188
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPTVTS 137
+ +R+ + +I ++ T G Y PT++S
Sbjct: 189 MEIDGRRIRVDYSITQRAHTPTPGIYMGKPTISS 222
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR--L 100
K++FVGG+++ T ++L F +YG +++V I +R G +G+GF+TFD + + L
Sbjct: 113 KKLFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVL 172
Query: 101 QKDSDNIMFKEKRLNIAPAI---------KKQGFTG-TYDSLPTVTSPVPPVP 143
Q+ + M K KR + A+ +K F G ++S P+ PP P
Sbjct: 173 QR---HHMIKGKRTEVKKALSKIEMEKAKRKDSFMGPPHNSGPSHHYRGPPAP 222
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK- 102
++F+GG++ +T + L E F +YG V + +++VDR G S+G+GF+TF S EEA +
Sbjct: 41 KLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 103 -DSDNIMFKEKRLNIAP 118
D ++ + R+N A
Sbjct: 101 LDGQDLHGRRVRVNYAT 117
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
++FVGGI E E + FSQ+G + ++++D+ G S+G+GFITFDS E R+
Sbjct: 84 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRV 140
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
+F+GG+ TTE L E FS++G V I+ D A G S+G+GF+TF
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTF 47
>gi|114691840|ref|XP_001139693.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
gi|114691960|ref|XP_001135842.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes verus]
Length = 460
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + T T+++L ELF+++G + K++ D +G SKG GF+ F + EA R+ + +
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 390 GKMVGGKPLYVALAQRKE 407
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TT+DEL F QYG + ++ D G S+ +GF+ F++ E+A R + +
Sbjct: 227 VYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALN 286
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 287 GKKFDDKEWYVGKAQKK 303
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + L E FS G + K+ D G S+GYGF+ FD+E+ AK + +
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLN 195
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
+ +K++ + P ++K+ D +
Sbjct: 196 GKVLNDKQIFVGPFLRKEERESAADKM 222
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
++FVGGI E E + FSQ+G + ++++D+ G S+G+GFITFDS E R+
Sbjct: 84 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRV 140
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
+F+GG+ TTE L E FS++G V I+ D A G S+G+GF+TF
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTF 47
>gi|1781299|emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
Length = 235
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDS 104
++V G+++ TE +L E FS+ G VK V +VV+ R+ IS+G+ FIT DS E+A R K
Sbjct: 68 LYVTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLEDANRCIKHL 127
Query: 105 DNIMFKEKRLNIAPAIKKQGFTGT 128
+ + + + + + + +K+ T T
Sbjct: 128 NQSVLEGRYITVEKSRRKRARTPT 151
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
G K++FVGG+ S+ TE E + F+Q+G + V ++ D R +G+GFI+F+SEE
Sbjct: 100 GPATSKKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAV 159
Query: 98 KRL 100
R+
Sbjct: 160 DRV 162
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ TTED L E F +G V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 6 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAERV 62
>gi|356554935|ref|XP_003545796.1| PREDICTED: uncharacterized protein LOC100791707 [Glycine max]
Length = 208
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 33 NNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITF 91
N A ++G +VFVGG+ T ++ + + F Q+G + + ++ D+A G SKGYGF+TF
Sbjct: 5 NLAGQFGDTTYTKVFVGGLAWETQKETMKKYFKQFGEILEAAVITDKATGRSKGYGFVTF 64
Query: 92 DSEEEAKRLQKDSDNIMFKEK-RLNIA--------PAIKKQG---FTGTYDSLPTVTSPV 139
E A R D ++ K N+A P+ K G F ++D++ + +
Sbjct: 65 REPEAAMRACVDPAPVIDGRKANYNLASLGVQRSKPSTPKHGPYIFYFSFDTVRDRSRAI 124
Query: 140 PP 141
PP
Sbjct: 125 PP 126
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L E FS +G + K+ VD +G SKGYGF+ +D++E A+R +
Sbjct: 129 IFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQRAIDKLN 188
Query: 106 NIMFKEKRLNIAPAIKK 122
++ +K++ + P + K
Sbjct: 189 GMLLNDKQVYVGPFVHK 205
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + T+D+L E F+ +G + K++ D G+S+G GF+ F + EEA R + +
Sbjct: 323 LYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPTGVSRGSGFVAFSTPEEASRAITEMN 382
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPV--PPV--PTSNMYYHNGLPYTYHNGM 161
M K L +A A +K+ + + PV PP P MY G P G
Sbjct: 383 GKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPM----GQ 438
Query: 162 AFFPSNG-QSMVPTSP 176
F G +M+P P
Sbjct: 439 QLFYGQGPPAMIPPQP 454
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ + +++EL ++F ++G+ I+ D G SKG+GF+ F++ ++A R +
Sbjct: 220 VYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALN 279
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 280 GKTFDDKEWFVGKAQKK 296
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDS 104
++VG + +T T+ +L E FSQ G V V++ D S GYG++ + + ++A R +
Sbjct: 41 LYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 100
Query: 105 DNIMFKEKRLNIA-----PAIKKQG 124
+ + + + + P+++K G
Sbjct: 101 NFMALNGRAIRVMYSVRDPSLRKSG 125
>gi|296490076|tpg|DAA32189.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 361
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKR 99
+ K++FVGGIT E L + F +YG + ++IV D ++G +G+GFITFD + +
Sbjct: 109 ITVKKLFVGGITEDMKEHHLRDYFEKYGKINAIEIVTDGQSGKKRGFGFITFDDHDPVDK 168
Query: 100 --LQKDSDNIMFKEKRLNIAPAIKKQ 123
LQK N R + A+ +Q
Sbjct: 169 IVLQK---NHTINGHRAEVRKALSRQ 191
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEE 96
++F+G ++S TTE+ L + Q+G + ++ D A S+ +GFITF S E
Sbjct: 22 KLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAE 74
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDS 93
++F+GG+ TTED L E FS+YG V ++KI+ D G S+G+GF++FD+
Sbjct: 131 KMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDA 180
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGG+ + E E FSQ+G + ++++D+ G S+G+GF+T+DS + A+++ +
Sbjct: 215 KIFVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAAEKV-CE 273
Query: 104 SDNIMFKEKRLNIAPA 119
S FK K++ I A
Sbjct: 274 SRYREFKGKQIEIKRA 289
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ T T+DEL E+F +YG + ++ D G S+ +GF+ F++ + A + ++ +
Sbjct: 216 VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELN 275
Query: 106 NIMFKEKRLNIAPAIKK 122
+F +K L + A KK
Sbjct: 276 GKIFNDKELYVGRAQKK 292
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + +++L ELF++YG + K++ D G+S+G GF+ F S E+A R + +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
M K L +A A +K+ + + PV P+
Sbjct: 379 GKMVGSKPLYVALAQRKEDRKAKLQAQFSQMRPVAMAPS 417
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + F +G + KI D +G S+GYGF+ F+ +E A+ +
Sbjct: 125 IFIKNLDKSIDNKALYDTFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLN 184
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P ++KQ
Sbjct: 185 GMLINDKKVFVGPFVRKQ 202
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + + EL + FS +G + KIV+D G SKGYGF+ F+ EE A+R + +
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 106 NIMFKEKRLNIAPAIKK 122
N++ +++ + + I K
Sbjct: 163 NMIIRDRVVYVGKFIPK 179
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + L E FS +G + K++ D SKG+GF+ F + E+A R D +
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ K L +A A +K+
Sbjct: 358 GTIIGSKPLYVALAQRKE 375
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ T ++L E+F+++G +K ++ D G SKG+GF+ F + A+ K
Sbjct: 194 LYIKNFPPETDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ + L A A +K+
Sbjct: 254 GKEIEGRALYCARAQRKE 271
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + T T+++L ELF+++G + K++ D +G SKG GF+ F + EA R+ + +
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 390 GKMVGGKPLYVALAQRKE 407
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ TT+DEL F QYG + ++ D G S+ +GF+ F++ E+A R + +
Sbjct: 227 VYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALN 286
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 287 GKKFDDKEWYVGKAQKK 303
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+FV + + L E FS G + K+ D G S+GYGF+ FD+E+ AK + +
Sbjct: 136 LFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLN 195
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYDSL 132
+ +K++ + P ++K+ D +
Sbjct: 196 GKVLNDKQIFVGPFLRKEERESAADKM 222
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRL-Q 101
K++FVGG++ T+ DE+ FSQ+G V++ +++D + +G+GF+TF++EE R+ +
Sbjct: 147 KKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDRVCE 206
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPV 139
NI K K++ A+ K+ GT V P+
Sbjct: 207 IHFHNI--KNKKVECKKAMPKEVVAGTLLGKRMVVGPL 242
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 29 AAVNNN----------APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD 78
AAVN N +P + ++FVGG++ T+ ++L + F +G + V I+ D
Sbjct: 34 AAVNGNGTGSGNEGSSSPGADSTAAGKLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKD 93
Query: 79 -RAGISKGYGFITFD 92
S+G+GFITF+
Sbjct: 94 PVTQRSRGFGFITFE 108
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ K++F+G + TT+D L F++ G V++ K+V DR +G SKG+GF+T+ ++E+A
Sbjct: 1 MSKKLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTA 60
Query: 101 QKDSDNIMFKEKRLNIAPA 119
K+ DN + +++ A
Sbjct: 61 IKELDNSELDGRNIHVNEA 79
>gi|118482964|gb|ABK93394.1| unknown [Populus trichocarpa]
Length = 294
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 27 YQAAVNN-NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISK 84
+Q AV N+ +Y ++FVGG+ T D + F Q+G + + ++ D+ G SK
Sbjct: 7 FQMAVGGGNSRQYNDTTYTKIFVGGLAWETQRDAMRRYFEQFGEILEAVVITDKNTGRSK 66
Query: 85 GYGFITFDSEEEAKRL-QKDSDNIMFKEKRLNIA 117
GYGF+TF E A R Q S I + N+A
Sbjct: 67 GYGFVTFKDPEAAVRACQNPSPVIDGRRANCNLA 100
>gi|114691838|ref|XP_001139951.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes]
gi|114691958|ref|XP_001136088.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes verus]
gi|410060470|ref|XP_003949299.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J [Pan troglodytes verus]
Length = 497
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|187281367|ref|NP_001119706.1| transformer 2 isoform B [Bombyx mori]
gi|61583220|gb|AAX47000.1| transformer-2 protein B [Bombyx mori]
Length = 273
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTE ++ +FS+YG V +V++V+D + G S+G+ F+ F+ E+AK + +
Sbjct: 118 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 177
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPTVTS 137
+ +R+ + +I ++ T G Y PT++S
Sbjct: 178 MEIDGRRIRVDYSITQRAHTPTPGIYMGKPTISS 211
>gi|149615308|ref|XP_001519571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like, partial
[Ornithorhynchus anatinus]
Length = 270
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKR 99
K++FVGG+ ED+L E FSQ+G V++ +I+ D+ +G +G+GF+ F S + A +
Sbjct: 89 KKLFVGGLKGDVAEDDLVEHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQSHDAADK 145
>gi|359489471|ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257521 [Vitis vinifera]
gi|296089004|emb|CBI38707.3| unnamed protein product [Vitis vinifera]
Length = 267
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
NA ++ ++FVGG+ T D + F Q+G +++ ++ D+ G SKGYGF+TF
Sbjct: 6 NAGQFNDTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFK 65
Query: 93 SEEEAKRL-QKDSDNIMFKEKRLNIA--------PAIKKQGFTGTYDSLPTVTSPVPPVP 143
+ A R Q S I + N+A P + G G + P + +P
Sbjct: 66 DPDAAMRACQNPSPVIDGRRANCNLASLGAHKTRPPTPQHG-AGRFRPAPGLVAPPAYHG 124
Query: 144 TSNMYYHN 151
+S+ Y+H
Sbjct: 125 SSSTYFHQ 132
>gi|15221825|ref|NP_173298.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
gi|9795594|gb|AAF98412.1|AC026238_4 Similar to glycine-rich RNA-binding proteins [Arabidopsis thaliana]
gi|29029110|gb|AAO64934.1| At1g18630 [Arabidopsis thaliana]
gi|110743184|dbj|BAE99483.1| hypothetical protein [Arabidopsis thaliana]
gi|332191616|gb|AEE29737.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
Length = 155
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 18 STQNNAFFNYQAAVNNNAPKYG--TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
S N F +A +NA G ++ P ++FVGG++ +T + L E F +G + +
Sbjct: 8 SRAGNIFRQPRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVV 67
Query: 76 VVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPA 119
V+DR +G+S+G+GF+T+DS E A + N + + + PA
Sbjct: 68 VLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPA 112
>gi|224061254|ref|XP_002300392.1| predicted protein [Populus trichocarpa]
gi|222847650|gb|EEE85197.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
K++FVGGI S+ TEDE FS++G V + +I+ D S+G+GFI FDSEE
Sbjct: 108 KKIFVGGIPSSVTEDEFQNFFSKHGKVVEHQIIRDHETNRSRGFGFIIFDSEE 160
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF 91
P ++F+GG+ TT + F +YG + I+ DR G +G+GFIT+
Sbjct: 18 PGKIFIGGLAKDTTYATFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITY 67
>gi|115733358|ref|XP_793862.2| PREDICTED: tRNA selenocysteine 1-associated protein 1-like, partial
[Strongylocentrotus purpuratus]
Length = 327
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSE 94
++VGG+ ++TT++EL LF+ Y +K+ KIV D SKG+GF+ F +E
Sbjct: 106 IYVGGLNTSTTDEELLALFAHYKSIKEAKIVRDEGTRSKGFGFVRFFNE 154
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRL 100
K++FVGGI T E+ L + F Q+G ++ V+I+VD + G +G+ F+TFD + R+
Sbjct: 124 KKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRI 181
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEE 96
+++F+GG++ TT+D L F Q+G + ++ D S+G+GF+T+ S +E
Sbjct: 33 RKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDE 86
>gi|345308310|ref|XP_003428682.1| PREDICTED: ELAV-like protein 2-like [Ornithorhynchus anatinus]
Length = 595
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 30 AVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGF 88
AV+ P ++ ++V G+ T T+ EL +LFSQYG + +I+VD+ G+S+G GF
Sbjct: 346 AVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGF 405
Query: 89 ITFDSEEEAKRLQK 102
I FD EA+ K
Sbjct: 406 IRFDKRIEAEEAIK 419
>gi|297850510|ref|XP_002893136.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338978|gb|EFH69395.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + L F QYG + + ++ D+ G SKGYGF+TF
Sbjct: 15 NSP-FGDTTFTKVFVGGLAWETQSETLRRHFEQYGDILEAVVITDKNTGRSKGYGFVTFR 73
Query: 93 SEEEAKRLQKDSDNIM-FKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPV--------- 142
E A+R D I+ + N+A ++ + Y +P V + PV
Sbjct: 74 DPEAARRACVDPAPIIDGRRANCNLA-SLGRPRLPMQYAVIPHVPGRIRPVSPYLGSVQS 132
Query: 143 PTSNMY----YHNGLPYTYHNGMAF 163
P +++ YH Y Y G+ +
Sbjct: 133 PRGSLFGSHPYHQPPAYNYQQGVVY 157
>gi|170571431|ref|XP_001891725.1| hypothetical protein [Brugia malayi]
gi|158603609|gb|EDP39472.1| conserved hypothetical protein [Brugia malayi]
Length = 842
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P N F Y + N +VFV I TE++L E+F+ +G ++ ++I
Sbjct: 679 PHDKGKNTEFRYSTGLEKN----------KVFVNNIHYDATEEQLKEIFTIFGTIRDIRI 728
Query: 76 VVDRAGISKGYGFITFDSEEEAKRLQK--DSDNIMFKEKRLNIA----PAIKKQ 123
V ++G SKG ++ F+++ +A K D+ +++ E++L++A P K+Q
Sbjct: 729 VTHKSGKSKGCAYVEFENDNDAAMAVKAGDAGDLILLERKLSVAISNPPKRKEQ 782
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDS 93
++F+GG+ TTED L + FS+YG V +KI+ D G S+G+GF+TFDS
Sbjct: 160 KMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDS 209
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI + E E F+Q+G + ++++D+ G S+G+GF+T+DS + R+ ++
Sbjct: 244 KIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQN 303
Query: 104 SDNIMFKEKRLNIAPA 119
I FK K++ I A
Sbjct: 304 K-FIDFKGKKIEIKRA 318
>gi|449503982|ref|XP_004162245.1| PREDICTED: RNA-binding protein 24-B-like [Cucumis sativus]
Length = 159
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
+N+ P G ++FVGG+ T E+ F Q+G + + I+ D+ G SKGYGF+
Sbjct: 9 LNHPPPFAGDTTWTKLFVGGLAWETQSHEMHSFFQQFGDILEAVIIQDKHTGKSKGYGFV 68
Query: 90 TFDSEEEAKR 99
TF E A+R
Sbjct: 69 TFKDPESARR 78
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSE 94
P ++ ++V G+ T T+ EL +LFSQYG + +I+VD+ GIS+G GFI FD
Sbjct: 110 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKR 169
Query: 95 EEAKRLQK 102
EA+ K
Sbjct: 170 IEAEEAIK 177
>gi|76573355|gb|ABA46782.1| unknown [Solanum tuberosum]
Length = 195
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 9 GSSNPSSPSSTQNNAFFNYQAAVNNNA---------PKYGTVVPKR------VFVGGITS 53
GSS S+P T+ F A + NA G P+R V V G+
Sbjct: 43 GSS--SAPKKTKGRGFREEAAEADRNARMSARFDSLDSEGGPGPERSIEGWIVLVTGVNE 100
Query: 54 TTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEK 112
T ED+L F ++G +K + + +DR G KGY FI ++S EEA+R + D F +
Sbjct: 101 ETQEDDLHNDFGEFGEIKNLHLNLDRRTGFVKGYAFIEYESFEEAQRAISEKDGAEFLTQ 160
Query: 113 RLNIAPAIKK 122
+++A A +
Sbjct: 161 TIHVAWAFSR 170
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 38 YGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEE 96
+ T+ R+FV G++ TT+++L E FS +G + K+++DRA G SKG+GFIT+ + EE
Sbjct: 30 HSTLTCPRLFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYATIEE 89
Query: 97 AKRLQK 102
A++ ++
Sbjct: 90 AEKARE 95
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + + EL + FS +G + KIV+D G SKGYGF+ F+ EE A+R + +
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 106 NIMFKEKRLNIAPAIKK 122
N++ +++ + + I K
Sbjct: 163 NMIIRDRVVYVGKFIPK 179
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + L E FS +G + K++ D SKG+GF+ F + E+A R D +
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ K L +A A +K+
Sbjct: 358 GTIIGSKPLYVALAQRKE 375
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF---DSEEEAKR 99
++V T ++L E+FS++G +K ++ D G SKG+GF+ + D E A R
Sbjct: 194 LYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYLDPDHAENAVR 250
>gi|432105098|gb|ELK31467.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Myotis
davidii]
Length = 1010
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
+Y T + K ++F+ G+ + T++EL E+ +G VK +++V +RAG KG ++ ++SE
Sbjct: 840 RYSTALEKHKLFISGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKGLAYVEYESES 899
Query: 96 EAKRLQKDSDNIMFKEKRLNIA 117
+A + D + KE + +A
Sbjct: 900 QASQAVMKMDGMTIKENVIKVA 921
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITF 91
++F+GG+ TTED L E FS+YG V +VKI+ D G S+G+GF++F
Sbjct: 172 KMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSF 219
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI E E FS++G + ++++D+ G S+G+GFIT+DS + R+ ++
Sbjct: 256 KIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQN 315
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
I FK KR+ I A +Q
Sbjct: 316 K-FIEFKGKRIEIKRAEPRQ 334
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella
moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella
moellendorffii]
Length = 289
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEA 97
V+VGG+ TED + F ++G + +VKI+ D G S+GYGFITF + E A
Sbjct: 9 VYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDHDGQSRGYGFITFATSEAA 60
>gi|430744003|ref|YP_007203132.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430015723|gb|AGA27437.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 143
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITF-DSEEEA 97
+ K+++VG +T TTED L ELFS+YG V +I++DR SKG+GF+ D +EA
Sbjct: 1 MAKKLYVGNLTYDTTEDNLVELFSEYGEVLSAQIIIDRDTNRSKGFGFVEMADGADEA 58
>gi|21553495|gb|AAM62588.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
Length = 152
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 18 STQNNAFFNYQAAVNNNAPKYG--TVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
S N F +A +NA G ++ P ++FVGG++ +T + L E F +G + +
Sbjct: 5 SRAGNIFRQPRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVV 64
Query: 76 VVDR-AGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPA 119
V+DR +G+S+G+GF+T+DS E A + N + + + PA
Sbjct: 65 VLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPA 109
>gi|449019177|dbj|BAM82579.1| probable heterogeneous nuclear RNP protein A [Cyanidioschyzon
merolae strain 10D]
Length = 273
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQK 102
+RV+V G+ TED+L FS++G ++ V++VVD G+SKGYGF+ F ++++Q
Sbjct: 114 RRVYVSGLPQACTEDDLRAFFSRFGSLEAVRVVVDHHTGLSKGYGFVVFAETAASQKVQS 173
Query: 103 -DSDNIMFK 110
D +N + +
Sbjct: 174 LDPENFVIR 182
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSE 94
++VFVGG++ T E L F ++G V ++ +R G +G+GF+TF+ E
Sbjct: 8 RKVFVGGLSWDTNEASLVAYFERFGKVIDAVVMRNRETGQPRGFGFVTFEEE 59
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + L E FS +G + K+ +D G SKG+GF+ ++ EE A+ K +
Sbjct: 130 IFIKNLDKMIDNKSLHETFSSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLN 189
Query: 106 NIMFKEKRLNIAPAIKKQGFTGTYD 130
++ +K + + P ++KQ ++D
Sbjct: 190 GMLINDKPVFVGPFLRKQERDHSFD 214
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ + + A KY + +++ + + +D+L ELFS +G + K++ D+ G+SKG
Sbjct: 308 FEQILKDAADKYQGL---NLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGS 364
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSP-VPPVPT 144
GF+ F + EEA + + + M K L +A A +K+ + + P VP PT
Sbjct: 365 GFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMRPAVPMTPT 423
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFV ++ +TT+++L ++F +YG + +++ G S+ +GFI F++ + A R ++ +
Sbjct: 221 VFVKNLSESTTKEDLLKIFGEYGNITSAVVMIGMDGKSRCFGFINFENPDAASRAVQELN 280
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 281 GKKINDKEWYVGRAQKK 297
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRL 100
+ R+FVGG++ T + L E F+ +G V K+++DR +G S+G+GF+ F E+ AK
Sbjct: 37 MSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEA 96
Query: 101 QK--DSDNIMFKEKRLNIA 117
D + + R+N+A
Sbjct: 97 MNAMDGQQLHGRNIRVNLA 115
>gi|332870664|ref|XP_003319035.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes]
Length = 460
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|332870655|ref|XP_003319032.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 2 [Pan troglodytes]
Length = 460
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSE 94
P ++ ++V G+ T T+ EL +LFSQYG + +I+VD+ GIS+G GFI FD
Sbjct: 145 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKR 204
Query: 95 EEAKRLQK 102
EA+ K
Sbjct: 205 IEAEEAIK 212
>gi|403223650|dbj|BAM41780.1| uncharacterized protein TOT_040000162 [Theileria orientalis strain
Shintoku]
Length = 416
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEA 97
K++FVGG++ E+ L E FS++G V +V I+ G S+G+GFI F +EE A
Sbjct: 204 KKIFVGGLSKALNEEMLDEYFSKFGEVDKVTIMRQLDGTSRGFGFIVFTTEEAA 257
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKD 103
+ FVGG+ T E EL F++YG + +++ D G +G+GF+T + + + KD
Sbjct: 121 KFFVGGLHPNTDETELSNYFAKYGQILSTQVMRDLTTGRHRGFGFVTLKVQHNSMNVFKD 180
Query: 104 SDNIMFKE-----KRLNIAPAIKKQGFTG 127
S + K + ++A +++K+ F G
Sbjct: 181 SHTVTGKRVDVRAMQTDLAASLRKKIFVG 209
>gi|374812572|ref|ZP_09716309.1| RNA-binding protein [Treponema primitia ZAS-1]
Length = 90
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAK 98
+ K+++VG ++ T ED L LFS +G V+ VKI+ DR G SKG+GF+ ++ EA+
Sbjct: 1 MAKKLYVGNLSYNTHEDNLRSLFSAFGTVESVKIITDRDTGNSKGFGFVEMSTDAEAQ 58
>gi|70948340|ref|XP_743694.1| spliceosome-associated protein [Plasmodium chabaudi chabaudi]
gi|56523315|emb|CAH77774.1| spliceosome-associated protein, putative [Plasmodium chabaudi
chabaudi]
Length = 394
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
V +F+G + + E L ++FS +G V VKIV + SKG+GFI++D+ E +
Sbjct: 105 VGANLFIGNLDTEVEEKMLFDIFSSFGQVISVKIVRNEDDTSKGHGFISYDNFESSDLAI 164
Query: 102 KDSDNIMFKEKRLNIAPAIKKQGFTG 127
++ +N K+++I+ A KK GF G
Sbjct: 165 ENMNNQFICNKKVHISYAFKK-GFKG 189
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFI 89
+++ + + E+ LCELF Q G VK V I D+ G GYGF+
Sbjct: 22 LYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFV 66
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 46 VFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
+FVG + S T+ L E+F + Y V+ +V DRA G SKGYGF+ F E R +
Sbjct: 211 IFVGDLASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQTRAMTE 270
Query: 104 SDNIMFKEKRLNIAPAIKKQ 123
+ + ++L I PA K+
Sbjct: 271 MNGVTLSSRQLRIGPAANKK 290
>gi|310793176|gb|EFQ28637.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 769
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 29 AAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYG 87
+A A K T + +FV + +T T + L + FS++ VK +V+D+A S+GYG
Sbjct: 34 SAAEPKAKKARTEANRSLFVRSLPATATSESLTDFFSEHFPVKHATVVLDKATKASRGYG 93
Query: 88 FITFDSEEEAKRLQKDSDNIMFKEKRLNI 116
F+T E+A +K +N+M++ +R+ +
Sbjct: 94 FVTLTDAEDAMEAKKKLNNMMWEGRRIRV 122
Score = 41.2 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEEAK 98
+F+ + T T+D+L E F ++G V+ ++V+DRA G GF+ F +EE+AK
Sbjct: 353 LFIRNLPFTVTDDQLKEHFVKFGPVRYARVVMDRATERPAGTGFVCFVNEEDAK 406
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + + EL + FS +G + KIV+D G SKGYGF+ F+ EE A+R + +
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 106 NIMFKEKRLNIAPAIKK 122
N++ +++ + + I K
Sbjct: 163 NMIIRDRVVYVGKFIPK 179
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + L E FS +G + K++ D SKG+GF+ F + E+A R D +
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ K L +A A +K+
Sbjct: 358 GTIIGSKPLYVALAQRKE 375
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 55 TTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRL 114
T ++L E+F+++G +K ++ D G SKG+GF+ F + A+ K + + L
Sbjct: 203 TDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRAL 262
Query: 115 NIAPAIKKQ 123
A A +K+
Sbjct: 263 YCARAQRKE 271
>gi|183222473|ref|YP_001840469.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189912511|ref|YP_001964066.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167777187|gb|ABZ95488.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167780895|gb|ABZ99193.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 87
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD- 103
++VG ++ TE +L ELF +G V KI+ D+ +G SKG+GFI +EA KD
Sbjct: 5 IYVGNLSYDMTEGKLSELFGAHGAVTSAKIITDQYSGRSKGFGFIEMKDGKEADNAIKDL 64
Query: 104 -SDNIMFKEKRLNIAP 118
NI+ +E ++NIA
Sbjct: 65 NGKNILNREMKVNIAK 80
>gi|332870647|ref|XP_003319028.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 2 [Pan troglodytes]
Length = 460
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|187281391|ref|NP_001119708.1| transformer 2 isoform D [Bombyx mori]
gi|61583222|gb|AAX47002.1| transformer-2 protein D [Bombyx mori]
Length = 289
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTE ++ +FS+YG V +V++V+D + G S+G+ F+ F+ E+AK + +
Sbjct: 129 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 188
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPTVTS 137
+ +R+ + +I ++ T G Y PT++S
Sbjct: 189 MEIDGRRIRVDYSITQRAHTPTPGIYMGKPTISS 222
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+ +++ G++ T+++L LF YG VK V++++D G SKG+ FI F +E EA R
Sbjct: 802 REIYIAGLSKLVTKEDLETLFKTYGNVKDVRMILDDKGKSKGFAFIEFTTEPEA-RAALA 860
Query: 104 SDNIMFKEKRLNIAPA 119
++N K++R+ + A
Sbjct: 861 ANNHELKKRRMAVTLA 876
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++FVGGI + E E F+QYG + ++++D+ G S+G+GF+T+DS + R+ +
Sbjct: 249 KIFVGGIGADVRPKEFEEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQ- 307
Query: 104 SDNIMFKEKRLNIAPA 119
S I FK K++ I A
Sbjct: 308 SKYIEFKGKQIEIKRA 323
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDS 93
++F+GG+ TTED L + F++YG V ++KI+ D G S+G+GF+TF++
Sbjct: 165 KMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFEN 214
>gi|296424721|ref|XP_002841895.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638146|emb|CAZ86086.1| unnamed protein product [Tuber melanosporum]
Length = 392
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYG-IVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+FVG + E L + F+ +G +V KI D GISKG+GFI++DS E + + +
Sbjct: 102 ELFVGNLDPMVDEKTLFDTFTTFGNLVSAPKIARDDQGISKGFGFISYDSFEASDKAIES 161
Query: 104 SDNIMFKEKRLNIAPAIKKQG 124
N K +N+ A KK G
Sbjct: 162 MHNQFLMNKEINVQYAYKKDG 182
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQK 102
K++FVGG+ ST +DE + FS++G V + +I+ D + S+G+GFI FD+E+ L
Sbjct: 102 KKIFVGGLVSTLKDDEFKDFFSKFGKVVEHEIIRDHSTNKSRGFGFIVFDAEKTVDELLA 161
Query: 103 DSDNIM 108
N++
Sbjct: 162 KKGNMI 167
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRLQ 101
P ++F+GG++ T+ E F +YG + I+ DR +G+GFITF R+
Sbjct: 13 PAKIFIGGLSKETSLGTFKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRVI 72
Query: 102 KDSDNIMFKEKRLNIAPAIKK 122
+ DN + K++ I I K
Sbjct: 73 E--DNHVIDGKQVEIKRTIPK 91
>gi|413938542|gb|AFW73093.1| hypothetical protein ZEAMMB73_850373 [Zea mays]
Length = 163
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 26/127 (20%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
+VFVGG+ T+ D L + ++G + + ++ DR +G SKGYGF+TF E A + +D
Sbjct: 33 KVFVGGLAWETSSDRLRRFYERFGDILEAVVITDRHSGRSKGYGFVTFREAESASKACED 92
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPP-----------VPTSNMYYHNG 152
++ +R N A SL PVPP VP +Y G
Sbjct: 93 PTPVI-DGRRANCNLA-----------SLGRAQHPVPPGRPRSAGSYLGVPVPKAFYLGG 140
Query: 153 LPYTYHN 159
Y++H
Sbjct: 141 --YSHHR 145
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
++ K++FVGGI T+ED L + FS+YG ++ V ++ D+ G +G+ F+TFD +
Sbjct: 101 MLVKKIFVGGIKEDTSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHD 156
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITF 91
+++F+GG+ TT+D L FS++G + ++ D S+G+GFIT+
Sbjct: 13 RKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITY 61
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
+ ++FVGGI+ T + L + F++YG V + +I++DR +G S+G+GF+T+ S EEA
Sbjct: 28 MSSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEA 84
>gi|443899832|dbj|GAC77160.1| thioredoxin [Pseudozyma antarctica T-34]
Length = 321
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFIT 90
NN P K+VF G + TTED+L LFS+ G V Q +I+ R S GYGF+T
Sbjct: 13 ANNVQPAKAEDDAKKVFAGNLAFATTEDDLKSLFSEAGKVTQAQIIT-RGTRSLGYGFVT 71
Query: 91 FDSEEEAK 98
F +E +A+
Sbjct: 72 FATETDAQ 79
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 39 GTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDSEEEA 97
G + P VFV + +TT++ L F +Y VK +V R G SKG+GF+ F+ E
Sbjct: 214 GELSPTLVFVANVAFSTTDESLKAAFGEY-KVKSAHVVKRRGGNRSKGFGFVDFEDAAEQ 272
Query: 98 KRLQKDSDNIMFKEKRLNIAPAIK 121
+R ++ NI +++++ A++
Sbjct: 273 QRAMANAQNIQIDGRQVSLQVAVQ 296
>gi|357120096|ref|XP_003561766.1| PREDICTED: uncharacterized protein LOC100826001 [Brachypodium
distachyon]
Length = 445
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 31 VNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFI 89
V+ + ++G +VFVGG+ T L + F +YG + +V ++ DR G SK YGF+
Sbjct: 28 VSYHRSRFGDTTLTKVFVGGLAWETLSTSLHDHFREYGEILEVVVITDRETGQSKVYGFV 87
Query: 90 TFDSEEEAKR-LQKDSDNIMFKEKRLNIA--------PAIKKQGFTGTYDSLPTVTSPVP 140
TF E A++ +Q + I + NIA P +QG D+ SP
Sbjct: 88 TFRDPESARQAVQNPNPMIAGRRANCNIASMGPPCPSPHRSEQGDACRMDTDALAFSPSH 147
Query: 141 PVPTSNMYYHNGLPYT----YHNGMAFFPSNGQSMVPTSPPTVPTQVK 184
VP + Y L + H + + G ++ +P + +++
Sbjct: 148 LVPRWKVAYSAALSTSRLRILHGSLEYHAVAGLLLLRDAPGEIIDRLR 195
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + + EL + FS +G + KIV+D G SKGYGF+ F+ EE A+R + +
Sbjct: 103 IFIKNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 106 NIMFKEKRLNIAPAIKK 122
N++ +++ + + I K
Sbjct: 163 NMIIRDRVVYVGKFIPK 179
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
++V + + L E FS +G + K++ D SKG+GF+ F + E+A R D +
Sbjct: 298 LYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDMN 357
Query: 106 NIMFKEKRLNIAPAIKKQ 123
+ K L +A A +K+
Sbjct: 358 GTIIGSKPLYVALAQRKE 375
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 55 TTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRL 114
T ++L E+F+++G +K ++ D G SKG+GF+ F + A+ K + + L
Sbjct: 203 TDNEKLKEMFNEFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRAL 262
Query: 115 NIAPAIKKQ 123
A A +K+
Sbjct: 263 YCARAQRKE 271
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P T + + + A N PK + K++FVGG++ T+ +E+ + FSQ+G V + +
Sbjct: 163 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVRQYFSQFGKVDETVM 222
Query: 76 VVD-RAGISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSL 132
++D + +G+GF+TF++E+ R+ + + + K K++ A K+ T T L
Sbjct: 223 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTI-KNKKVECKKAQPKEAVTPTAQQL 279
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRL 100
P ++FVGG++ T+ ++L E F +G V V I+ D S+G+GFITF ++
Sbjct: 100 APGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKV 159
Query: 101 QK 102
K
Sbjct: 160 LK 161
>gi|187281433|ref|NP_001119710.1| transformer 2 isoform F [Bombyx mori]
gi|61583224|gb|AAX47004.1| transformer-2 protein F [Bombyx mori]
Length = 274
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTE ++ +FS+YG V +V++V+D + G S+G+ F+ F+ E+AK + +
Sbjct: 114 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 173
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPTVTS 137
+ +R+ + +I ++ T G Y PT++S
Sbjct: 174 MEIDGRRIRVDYSITQRAHTPTPGIYMGKPTISS 207
>gi|332870645|ref|XP_003319027.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 1 [Pan troglodytes]
Length = 497
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|332870653|ref|XP_003319031.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|355694911|gb|AER99826.1| heteroproteinous nuclear ribonucleoprotein A2/B1 [Mustela putorius
furo]
Length = 173
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 95 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 150
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 57
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L + F+ +G V K+ VD G SKGYGF+ FD+EE A+ K+ +
Sbjct: 95 VFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELN 154
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + + +Q
Sbjct: 155 GMLINDKKVYVGLFVNRQ 172
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 37 KYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEE 96
KY ++V + +D+L ELFS++G + K++++ G SKGYGF+ F +
Sbjct: 281 KYEKYHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRN 340
Query: 97 AKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYD---SLPTVTSPVPPVPTSNMYYHNGL 153
A R + + M + L +A A +K+ + S + +PT YH G
Sbjct: 341 ANRALHEMNGKMIGRRPLYVAVAQRKEERKALLEAQFSQMHALYAITHLPTGIPVYHPGA 400
Query: 154 PYTYHNGMAFFPSNGQ-SMVPTSPPTVPTQVKIL--LPPGV 191
P H A G S+V P Q ++L + PGV
Sbjct: 401 P--RHGPQALHYGQGAPSLVAPQPTGYGFQQQLLPGMHPGV 439
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEA 97
V+V + T T+++L +LFS YG + ++ D G S+ +GF+ F+S + A
Sbjct: 186 VYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSA 237
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKR------ 99
++VG + E +L +LF++ G + +++ D S GY ++ F + ++A
Sbjct: 8 LYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAMEHLN 67
Query: 100 ---LQKDSDNIMFKEKRLNIAPAIKKQGFTGTY 129
L S +MF N P+I+K G+ +
Sbjct: 68 FTPLNGKSIRVMFS----NRDPSIRKSGYANVF 96
>gi|340377267|ref|XP_003387151.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Amphimedon
queenslandica]
Length = 403
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
+R+FVGG++S T ED++ E F +G V++V+++ D+ +G+GF+TF+ A ++
Sbjct: 146 RRIFVGGLSSDTDEDDMKEFFEVFGPVEEVQLMYDKHTNRHRGFGFVTFEKVGPAAKVC- 204
Query: 103 DSDNIMF---KEKRLNIAPAIKKQGFTGTYD 130
+I F K+KR+ + A K+ D
Sbjct: 205 ---SIQFHDLKKKRVEVKVAQTKEALAHQAD 232
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITF-DSEEEAKRLQKD 103
++F+G +++ T+E+ L F ++G++ + I+ D G S+G+GFITF D+ L+
Sbjct: 55 KLFIGALSNDTSEETLEAYFKKFGVILECTIMKDGTGKSRGFGFITFKDANSIQCILEAH 114
Query: 104 SDN-IMFKEKRLNIAPAIKKQG 124
+++ I+ +K ++ PA+ K+G
Sbjct: 115 AESPIIIDDKMIDPKPAVPKRG 136
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKD 103
++FVGG++ TE L E FS+YG V + +V D+ + KG+GF+ F S EEA +++
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 104 SDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPV 142
+ + + + A +Q D+LP P P+
Sbjct: 96 MNGKALNGRVIYVDIAKARQDRAA--DALPIARGPPKPI 132
>gi|167523433|ref|XP_001746053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775324|gb|EDQ88948.1| predicted protein [Monosiga brevicollis MX1]
Length = 635
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 8 EGSSNPSSPSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQY 67
+ + + SSP+S +N FN QA V+ + + I ++ ++D+L LF Y
Sbjct: 163 DDAGDASSPTSNGSNGQFN-QAPVSKT----------NLIINYIPNSFSQDDLRALFGAY 211
Query: 68 GIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIA 117
G +K K++ DRA G S GYGF+ ++ E A + + + KRL ++
Sbjct: 212 GALKSCKLMYDRATGKSLGYGFVEYEDENGATKAADALNEFQIENKRLKVS 262
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
P T+ +++ G+ +T E L ++FS G + V+++ DR G KG GF+ FD +
Sbjct: 266 PSSSTITNANLYIKGLPTTINEQSLTDMFSSCGDIISVRVLYDRNGTPKGVGFVRFDQHK 325
Query: 96 EAKRLQKDSDNI 107
EA+ + +N+
Sbjct: 326 EAENAIQRFNNV 337
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIV-VDRAGISKGYGFITFDSEEEAKRLQKDS 104
+FV + TE +L L QYG V+ IV G SKGY FIT + +A + ++
Sbjct: 443 LFVYNLPPACTEQDLTALVGQYGNVRSASIVRYKETGSSKGYAFITVATNADATNVIRNL 502
Query: 105 DNIMFKEKRLNIAPAIKKQ 123
+N+ + + L + + KKQ
Sbjct: 503 NNMRYNGRDLQV--SFKKQ 519
>gi|328873245|gb|EGG21612.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 370
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQ 101
+ +++FVG + T+ ED++ +LFS+YG ++ + IV + G KGYGF+ F EEA+
Sbjct: 101 MERKLFVG-MLGTSNEDQIKQLFSKYGNIEDINIVREPDGKPKGYGFVKFSMREEAEEAI 159
Query: 102 KDSD 105
+D D
Sbjct: 160 RDMD 163
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEA 97
+VFVG I T EDEL E+F ++G + + I+ D + + +G FI++ ++EEA
Sbjct: 15 KVFVGHIPLTMKEDELSEIFDKFGSILNISIIKDKKTSVPRGCAFISYGTKEEA 68
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
+F+ + ++ + EL LF QYG V K+ +D+ G SK +GF+++D + A
Sbjct: 292 LFIYYLPASYGDAELKNLFQQYGNVVSAKVFIDKNTGQSKCFGFVSYDRSQSA 344
>gi|332870651|ref|XP_003319030.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 2 [Pan troglodytes]
Length = 460
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 20 QNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD- 78
++A FN + +P G K++FVGG+ S+ TE E + F+Q+G++ V ++ D
Sbjct: 84 DDHAVFNKSNSSLQGSP--GPSTTKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDH 141
Query: 79 RAGISKGYGFITFDSEEEA-KRLQK 102
R +G+GFI++DSE+ K LQK
Sbjct: 142 RTQRPRGFGFISYDSEDAVDKVLQK 166
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSEEEAKRL 100
++F+GGI+ T+ED L E F +G V + I+ DRA G ++G+GF+ F A+R+
Sbjct: 7 KLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERV 63
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYGFITFDSEEEAKRL 100
K++FVGG+ ST TE + + F Q+G++ V ++ D +G+GFIT+DSEE ++
Sbjct: 107 KKIFVGGLASTVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKV 164
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GGI+ T E+ L + F +G V + I+ DR G ++G+GF+ F A+R+ K+
Sbjct: 7 KLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAERVIKE 66
Query: 104 SDNI 107
+I
Sbjct: 67 KHSI 70
>gi|332870649|ref|XP_003319029.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 1 [Pan troglodytes]
Length = 506
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
+ V+V G++ TT+ +L +LF+ YG VK V++ ++ G ++GY F+ ++ ++A+R D
Sbjct: 804 REVYVAGLSKFTTKADLEKLFATYGKVKDVRMATEQDGHARGYAFVEYEEPQDARR-ALD 862
Query: 104 SDNIMFKEKRLNIAPA 119
++N K++R+ + A
Sbjct: 863 ANNYELKKRRIAVTLA 878
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 46/78 (58%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + + L + FS +G + K+ VD +G SKGYGF+ +++EE A++ +
Sbjct: 130 IFIKNLDKSIDHKALHDTFSVFGNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLN 189
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + P +++Q
Sbjct: 190 GMLLNDKQVYVGPFLRRQ 207
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
Y+ ++ A K+ + ++V + + ++++L ELF+ YG V K++ D G+S+G
Sbjct: 308 YEQSLKEAADKFQS---SNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGS 364
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPV---PPV 142
GF+ F + EEA + + M + K L +A A +K+ + + PV PPV
Sbjct: 365 GFVAFSTPEEATKAMSEMSGKMIENKPLYVAVAQRKEDRRARLQAQFSQMRPVAMPPPV 423
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V + +TT+D+L +F ++G + ++ D G KG+GF+ F++ ++A + + +
Sbjct: 221 VYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGEGKPKGFGFVNFENADDAAKAVESLN 280
Query: 106 NIMFKEKRLNIAPAIKK 122
F +K + A KK
Sbjct: 281 GKTFDDKEWFVGRAQKK 297
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 35 APKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDS 93
A ++GT ++VG + T+ +L + FSQ G V V++ D A S GYG++ F S
Sbjct: 34 AAQFGTT---SLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTS 90
Query: 94 EEEAKRLQKDSDNIMFKEKRLNIA-----PAIKKQG 124
++A R ++ + I K + + P++++ G
Sbjct: 91 PQDAARAIQELNYIPLNGKPVRVMYSHRDPSVRRSG 126
>gi|255584774|ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis]
Length = 94
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQK 102
++FVG ++ TT +L +LFS +GIVK+ ++V+D R KG+GF+TFDSE +A++ K
Sbjct: 8 QLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKALK 66
>gi|147901029|ref|NP_001088379.1| RNA-binding protein with serine-rich domain 1-A [Xenopus laevis]
gi|82233407|sp|Q5XG24.1|RNP1A_XENLA RecName: Full=RNA-binding protein with serine-rich domain 1-A
gi|54038322|gb|AAH84646.1| LOC495230 protein [Xenopus laevis]
Length = 283
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR--AGISKGYGFITFDSEEEAKRL 100
P +V +G +T T+D + E+FS YG +K + + VDR +SKGY ++ F++ EEA++
Sbjct: 137 PTKVHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKA 196
Query: 101 QKDSD 105
K D
Sbjct: 197 LKHMD 201
>gi|410924257|ref|XP_003975598.1| PREDICTED: tRNA selenocysteine 1-associated protein 1-like
[Takifugu rubripes]
Length = 340
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VFVG + S + +L ++F Y K K+V D+ G S+GYGF+ F E E K+ ++
Sbjct: 101 VFVGDLASDVQDFQLQQVFKNYPSCKGAKVVTDQYGYSRGYGFVKFGEESEQKKAIEECQ 160
Query: 106 NIMFKEKRLNIAPAIKK 122
M K L ++ A+ K
Sbjct: 161 GTMLSGKPLRLSVAVAK 177
>gi|357447959|ref|XP_003594255.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483303|gb|AES64506.1| RNA-binding protein, putative [Medicago truncatula]
Length = 446
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 34 NAPKYGTVVP-----KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS-KGYG 87
N+ +G+ P K++FVGG+ ST TE + F Q+G + V ++ D +G+G
Sbjct: 56 NSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFG 115
Query: 88 FITFDSEEEAKRL 100
FIT+DSEE +++
Sbjct: 116 FITYDSEEAVEKV 128
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + +++L ELFS+YG + K+++D+ G+SKG GF+ F S +EA + + +
Sbjct: 319 LYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMN 378
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 379 GKMKGRKPLYVAVAQRKE 396
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L + F+ +G V K+ VD G SKGYGF+ F+SEE A+ + +
Sbjct: 125 VFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLN 184
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I+ Q
Sbjct: 185 GMLLNDKQVYVGHFIRHQ 202
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 24 FFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS 83
F +Q + N ++ V+V + TTT+D+L LF+ +G + ++ D G S
Sbjct: 198 FIRHQERIRANGSQF-----TNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKS 252
Query: 84 KGYGFITF-DSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
K +GF+ F +++ A ++K ++ +K L + A +K
Sbjct: 253 KCFGFVNFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRK 292
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEA 97
++FVGG++ T + L + F++YG V + KI++DR +G S+G+GFIT+ S EEA
Sbjct: 35 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEA 88
>gi|187281421|ref|NP_001119709.1| transformer 2 isoform E [Bombyx mori]
gi|61583223|gb|AAX47003.1| transformer-2 protein E [Bombyx mori]
Length = 278
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 48 VGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRLQKDSDN 106
V G++ TTE ++ +FS+YG V +V++V+D + G S+G+ F+ F+ E+AK + +
Sbjct: 118 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 177
Query: 107 IMFKEKRLNIAPAIKKQGFT---GTYDSLPTVTS 137
+ +R+ + +I ++ T G Y PT++S
Sbjct: 178 MEIDGRRIRVDYSITQRAHTPTPGIYMGKPTISS 211
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQK 102
+FVG ++ TED+L E+FS YG VK V++ DR +G KG+G++ F+ E AK+ +
Sbjct: 411 LFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHE 468
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
K +FVG ++ D L F++ G V ++ +DR G S+G+GF+TF S E
Sbjct: 309 KTIFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPE 361
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEE-AKRLQK 102
++FVGG++ T E L + FSQ+G V +VK++ G SKGYGF+ F SE E A L+K
Sbjct: 31 KLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRSKGYGFVKFSSESEAAAALEK 90
Query: 103 DSDNIM 108
S+ ++
Sbjct: 91 MSNELL 96
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 36 PKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRA-GISKGYGFITFDSE 94
P ++ ++V G+ T T+ EL +LFSQYG + +I+VD+ G+S+G GFI FD
Sbjct: 141 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKR 200
Query: 95 EEAK 98
EA+
Sbjct: 201 IEAE 204
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 16 PSSTQNNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKI 75
P+ + N A+ +++ + G V P R++VG + TED L +F +G + ++++
Sbjct: 271 PTQAERNRAAAQNASTSSSTLQRGNVGPMRLYVGSLHFNITEDMLKGIFEPFGKIDKIEL 330
Query: 76 VVD-RAGISKGYGFITFDSEEEAKR 99
+ D SKGYGFITF E+AK+
Sbjct: 331 IKDMETNRSKGYGFITFHDSEDAKK 355
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 27 YQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGY 86
++ ++ KY V +++ + + +++ L ELFS +G++ K++ D +GIS+G
Sbjct: 304 FEQSMKEAVDKYQGV---NLYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRGS 360
Query: 87 GFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTVTSPVPPVPT 144
GF+ F + EEA R + + M K L +A A +K+ + + PV P+
Sbjct: 361 GFVAFSTPEEASRALAEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPS 418
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+F+ + T L + FS +G + K+ D +G S+GYGF+ FD+EE A+ +
Sbjct: 127 IFIKNLDKTIDHKALHDTFSSFGNILSCKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLN 186
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + ++K
Sbjct: 187 GMLLNDKQVYVGHFLRKH 204
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
V+V ++ +TTE++L +F +YG + I+ D G SK +GF+ F++ + A + + +
Sbjct: 217 VYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAVESLN 276
Query: 106 NIMFKEKRLNIAPAIKK 122
+K + A KK
Sbjct: 277 GKKIDDKEWYVGKAQKK 293
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 42 VPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVD-RAGISKGYGFITFDSEEEAKRL 100
+P ++VG + T+ +L ++F+Q G V V++ D S GYG++ + S ++A R
Sbjct: 35 MPTSLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARA 94
Query: 101 QKDSDNIMFKEKRLNIA-----PAIKKQG 124
+ F K + I P+I+K G
Sbjct: 95 LDILNFTPFNNKPIRIMYSHRDPSIRKSG 123
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 45 RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEEEAKRLQKD 103
++F+GG+ T E L + F ++G V++ +V DR G S+G+GF+ + +E++A+R
Sbjct: 3 KLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAISA 62
Query: 104 SDNIMFKEKRLNI 116
+N+ F + + +
Sbjct: 63 MNNVEFDGRTIRV 75
>gi|357480265|ref|XP_003610418.1| RNA-binding protein [Medicago truncatula]
gi|355511473|gb|AES92615.1| RNA-binding protein [Medicago truncatula]
Length = 319
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 21 NNAFFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELF-SQYGIVKQVKIVVDR 79
N A F+ ++++P Y +FVG + + ++ L E+F ++Y VK K+V+DR
Sbjct: 150 NWATFSSGEKRHDDSPDY------TIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDR 203
Query: 80 A-GISKGYGFITFDSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
G +KGYGF+ F E E R + ++ + + I PA K
Sbjct: 204 TTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNK 247
>gi|114691683|ref|XP_001135255.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 4 [Pan troglodytes]
gi|332870660|ref|XP_003319033.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLDGKAIKVEQAKK 85
>gi|357467185|ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
gi|355492925|gb|AES74128.1| RNA-binding protein 24-B [Medicago truncatula]
Length = 371
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 34 NAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFD 92
N+P +G +VFVGG+ T + + F Q+G + + ++ D+ G SKGYGF+TF
Sbjct: 20 NSP-FGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFR 78
Query: 93 SEEEAKRLQKD-SDNIMFKEKRLNIAPAIKKQGFTGTYDSL----PTVTS--PVPPVPTS 145
E A+R D S I + N+A + +G +Y + P V S P
Sbjct: 79 DPEAARRACADPSPVIDGRRANCNLASHGRPRGPPISYGRVRPASPYVGSLQPARGAYVG 138
Query: 146 NMYYHNGLPYTYHNGMAFFP 165
Y L Y Y GM + P
Sbjct: 139 GYGYQQPLSYGYQQGMVYPP 158
>gi|47124558|gb|AAH70298.1| RBMY1A1 protein [Homo sapiens]
gi|312151036|gb|ADQ32030.1| RNA binding motif protein, Y-linked, family 1, member A1 [synthetic
construct]
Length = 459
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 43 PKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQK 102
P ++F+GG+ T E L +F ++G + +V ++ DR S+G+ FITF++ +AK K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 103 DSDNIMFKEKRLNIAPAIK 121
D + K + + A K
Sbjct: 67 DMNGKSLHGKAIKVEQAKK 85
>gi|8394239|ref|NP_058622.1| squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|81917559|sp|Q9JLI8.1|SART3_MOUSE RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=mSART-3; AltName:
Full=Tumor-rejection antigen SART3
gi|7637845|gb|AAF65228.1|AF172722_1 tumor-rejection antigen SART3 [Mus musculus]
gi|34980898|gb|AAH57156.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|148687992|gb|EDL19939.1| squamous cell carcinoma antigen recognized by T-cells 3, isoform
CRA_b [Mus musculus]
Length = 962
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
+Y T + K ++F+ G+ + T++EL ++ +G VK +++V +RAG KG ++ +++E
Sbjct: 793 RYSTTLEKHKLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYENES 852
Query: 96 EAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTV-TSPVPPVPTSNMYYHNG-- 152
+A + D + +E + +A + Q P V T+P P+ MY G
Sbjct: 853 QASQAVMKMDGMTIRENVIKVAISNPPQ---RKVPEKPEVRTAPGAPMLPRQMYGARGKG 909
Query: 153 ------LPYTYH-NGMAFFPSNGQSMVPTSPPTVPTQ 182
LP G A NG + P P+V T+
Sbjct: 910 RTQLSLLPRALQRQGAAPQAENGPAPGPAVAPSVATE 946
>gi|31455238|gb|AAH00506.3| HNRNPA2B1 protein [Homo sapiens]
Length = 249
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 41 VVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDR-AGISKGYGFITFDSEE 95
V K++FVGGI T E L + F +YG + ++I+ DR +G +G+GF+TFD +
Sbjct: 97 VTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHD 152
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAG-ISKGYGFITFDS 93
+++F+GG++ TTE+ L + Q+G + ++ D A S+G+GF+TF S
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 59
>gi|26352049|dbj|BAC39661.1| unnamed protein product [Mus musculus]
Length = 962
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 37 KYGTVVPK-RVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEE 95
+Y T + K ++F+ G+ + T++EL ++ +G VK +++V +RAG KG ++ +++E
Sbjct: 793 RYSTTLEKHKLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYENES 852
Query: 96 EAKRLQKDSDNIMFKEKRLNIAPAIKKQGFTGTYDSLPTV-TSPVPPVPTSNMYYHNG-- 152
+A + D + +E + +A + Q P V T+P P+ MY G
Sbjct: 853 QASQAVMKMDGMTIRENVIKVAISNPPQ---RKVPEKPEVRTAPGAPMLPRQMYGARGKG 909
Query: 153 ------LPYTYH-NGMAFFPSNGQSMVPTSPPTVPTQ 182
LP G A NG + P P+V T+
Sbjct: 910 RTQLSLLPRALQRQGAAPQAENGPAPGPAVAPSVATE 946
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
+++ + +++L ELFS+YG + K+++D+ G+SKG GF+ F S +EA + + +
Sbjct: 319 LYIKNLDDHIDDEKLKELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMN 378
Query: 106 NIMFKEKRLNIAPAIKKQ 123
M K L +A A +K+
Sbjct: 379 GKMKGRKPLYVAVAQRKE 396
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 46 VFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKDSD 105
VF+ + + L + F+ +G V K+ VD G SKGYGF+ F+SEE A+ + +
Sbjct: 125 VFIKNLDLSIDNKALRDTFAAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLN 184
Query: 106 NIMFKEKRLNIAPAIKKQ 123
++ +K++ + I+ Q
Sbjct: 185 GMLLNDKQVYVGHFIRHQ 202
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 24 FFNYQAAVNNNAPKYGTVVPKRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGIS 83
F +Q + N ++ V+V + TTT+D+L LF+ +G + ++ D G S
Sbjct: 198 FIRHQERIRANGSQF-----TNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKS 252
Query: 84 KGYGFITF-DSEEEAKRLQKDSDNIMFKEKRLNIAPAIKK 122
K +GF+ F +++ A ++K ++ +K L + A +K
Sbjct: 253 KCFGFVNFQNTDSAAAAVEKLDGTVLGDDKTLYVGRAQRK 292
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 44 KRVFVGGITSTTTEDELCELFSQYGIVKQVKIVVDRAGISKGYGFITFDSEEEAKRLQKD 103
K +F+ + + TE +L F +G +++V+IV D+ G S+GY FI F+ E + K K+
Sbjct: 118 KTLFIARLHKSATEGDLRREFEGFGSIERVRIVRDKNGRSQGYAFIVFERERDMKAAYKE 177
Query: 104 SDNIMFKEKRL 114
SD + KR+
Sbjct: 178 SDRLHIMGKRV 188
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,019,281,671
Number of Sequences: 23463169
Number of extensions: 177706256
Number of successful extensions: 583715
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5290
Number of HSP's successfully gapped in prelim test: 14248
Number of HSP's that attempted gapping in prelim test: 552895
Number of HSP's gapped (non-prelim): 34174
length of query: 242
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 104
effective length of database: 9,121,278,045
effective search space: 948612916680
effective search space used: 948612916680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)