RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15516
         (107 letters)



>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli
           [TaxId: 562]}
          Length = 385

 Score = 23.4 bits (49), Expect = 9.3
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 27  DIPEGL-EFKIKRERY--LAKQALQDSETMMNHVVFGICRMIDIL 68
            IP  L +  +++E    LA+ AL D  T  N     +  ++++ 
Sbjct: 334 GIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELY 378


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.329    0.144    0.426 

Gapped
Lambda     K      H
   0.267   0.0641    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 420,705
Number of extensions: 18228
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 10
Length of query: 107
Length of database: 2,407,596
Length adjustment: 67
Effective length of query: 40
Effective length of database: 1,487,686
Effective search space: 59507440
Effective search space used: 59507440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 47 (22.1 bits)