Query psy15518
Match_columns 195
No_of_seqs 131 out of 1146
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 23:22:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1orq_C Potassium channel; volt 98.8 1.2E-08 4E-13 82.7 7.3 104 42-170 9-115 (223)
2 2r9r_B Paddle chimera voltage 97.9 1.1E-05 3.7E-10 73.5 6.5 100 34-146 174-290 (514)
3 2kyh_A KVAP, voltage-gated pot 97.8 2.8E-05 9.7E-10 59.7 6.4 79 42-145 22-100 (147)
4 1ors_C Potassium channel; volt 97.8 0.00012 4.2E-09 54.8 9.2 104 41-172 6-109 (132)
5 3rvy_A ION transport protein; 96.7 0.004 1.4E-07 51.7 7.4 100 42-169 31-131 (285)
6 3beh_A MLL3241 protein; transm 96.3 0.0049 1.7E-07 52.6 5.4 109 33-170 3-113 (355)
7 4dxw_A Navrh, ION transport pr 95.8 0.02 6.7E-07 45.9 6.5 108 41-173 12-120 (229)
8 2a9h_A Voltage-gated potassium 41.4 5.6 0.00019 30.0 0.0 12 130-141 15-26 (155)
9 1ors_C Potassium channel; volt 30.2 26 0.00089 25.2 2.1 21 154-174 97-117 (132)
10 2v2f_A Penicillin binding prot 12.3 1.1E+02 0.0038 15.3 1.6 13 106-118 7-19 (26)
No 1
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=98.78 E-value=1.2e-08 Score=82.71 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHHH
Q psy15518 42 VWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGL 121 (195)
Q Consensus 42 ~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~~ 121 (195)
.||..++++.+++...+........+.. +...+..+|.+++++|.+|+++++.++. +
T Consensus 9 ~f~~~i~~lil~~~~~~~~~~~~~~~~~-----------~~~~l~~~d~~~~~iF~~e~~lr~~~~~---------~--- 65 (223)
T 1orq_C 9 LVELGVSYAALLSVIVVVVECTMQLSGE-----------YLVRLYLVDLILVIILWADYAYRAYKSG---------D--- 65 (223)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHTTC-----------TTTHHHHHHHHHHHHHHHHHHHHHHTTS---------C---
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccChh-----------hhhHHHHHHHHHHHHHHHHHHHHHcccc---------c---
Confidence 5899999999999998887753322221 1256788999999999999999999862 2
Q ss_pred HHHHcchhhhHhhhhhhccHHHHHhh-cCC--ccccccchhhhHhhHHHHHH
Q psy15518 122 IALHYLRGWFIIDLVAAIPFDLLIFG-SET--EETLDSRELPLSMSIEMHFK 170 (195)
Q Consensus 122 Ia~~Ylk~~F~~Dlis~lPl~~i~~~-~~~--~~~l~~~rl~rllk~~rlf~ 170 (195)
.++|+|+ +++|++|++|++..... .+. ...++..|++|++|+.|+++
T Consensus 66 -~~~y~~~-~iiDllailP~~~~~~~~~~~~~~~~lr~lRllRllR~~r~~~ 115 (223)
T 1orq_C 66 -PAGYVKK-TLYEIPALVPAGLLALIEGHLAGLGLFRLVRLLRFLRILLIIS 115 (223)
T ss_dssp -HHHHHHH-HHHHCTTHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHH-hHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3689988 99999999999876531 111 12344444444444444444
No 2
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=97.95 E-value=1.1e-05 Score=73.53 Aligned_cols=100 Identities=17% Similarity=0.283 Sum_probs=67.8
Q ss_pred ccC-ChHHHHHHHHHHHHHHHHHHHhhhhhh--cccCCCCCcc-----------c--cccccCCCchHHHHHHHHHHHHH
Q psy15518 34 LHY-SPFKAVWDWLILILVVYTAIFTPYVAA--FLLNEPDFTN-----------R--TRNIRRYSDPIVFVDLIVDVTFI 97 (195)
Q Consensus 34 ~P~-s~~~~~Wd~i~~~~~~~~~~~iP~~ia--F~~~~~~~~~-----------~--~~~~~~~~~~~~~i~~i~dv~f~ 97 (195)
+|+ |...+.++.+++++++.+.+...+.-. +.......+. . .+....+...+.++|.++.++|.
T Consensus 174 ~p~sS~~a~~f~~~~i~~Illsii~~~leT~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ie~i~~~iFt 253 (514)
T 2r9r_B 174 YPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFS 253 (514)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHTCSTTTTSCCCCHHHHHHHHHSSCCCTTCCCHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccchhhhHHHHHHHHHHHHHH
Confidence 465 578889999999999988888776531 1111000000 0 00000123568899999999999
Q ss_pred HHHhHHhceeEEecCCeEEecHHHHHHHcchh-hhHhhhhhhccHHHHHh
Q psy15518 98 VDIAINFRTTYVNANDEVVSNPGLIALHYLRG-WFIIDLVAAIPFDLLIF 146 (195)
Q Consensus 98 iDIil~f~t~y~d~~G~~V~d~~~Ia~~Ylk~-~F~~Dlis~lPl~~i~~ 146 (195)
+|+++++.++- + ..+|+++ |.++|+++++|..+...
T Consensus 254 iE~ilR~~~~~---------~----k~~Y~ks~wniiDli~iip~~i~l~ 290 (514)
T 2r9r_B 254 FEFLVRFFACP---------S----KAGFFTNIMNIIDIVAIIPYYVTIF 290 (514)
T ss_dssp HHHHHHHHHSS---------C----SSSSTTSHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHhCC---------c----HHHHHhchhHHHHHHHHHHHHHHHH
Confidence 99999999651 1 1489997 79999999999876554
No 3
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=97.85 E-value=2.8e-05 Score=59.66 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHHH
Q psy15518 42 VWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGL 121 (195)
Q Consensus 42 ~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~~ 121 (195)
.||..+.+..+.+...+-.......... +...+..+|.++-++|.+|.++++..+ + |+
T Consensus 22 ~f~~~i~~lil~sv~~v~~et~~~i~~~-----------~~~~~~~id~~~~~iF~~Ey~lRl~~a---~------~k-- 79 (147)
T 2kyh_A 22 LVELGVSYAALLSVIVVVVEYTMQLSGE-----------YLVRLYLVDLILVIILWADYAYRAYKS---G------DP-- 79 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHH---T------CH--
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhchh-----------HHHHHHHHHHHHHHHHHHHHHHHHHHC---C------cH--
Confidence 4788888888888887777765433221 113467889999999999999999865 1 33
Q ss_pred HHHHcchhhhHhhhhhhccHHHHH
Q psy15518 122 IALHYLRGWFIIDLVAAIPFDLLI 145 (195)
Q Consensus 122 Ia~~Ylk~~F~~Dlis~lPl~~i~ 145 (195)
++|.++ =++|++|++|+....
T Consensus 80 --~~f~~~-~iiDllailP~~~~~ 100 (147)
T 2kyh_A 80 --AGYVKK-TLYEIPALVPAGLLA 100 (147)
T ss_dssp --HHHHHH-STTTHHHHCCHHHHH
T ss_pred --HHHHHH-HHHHHHHHHHHHHHH
Confidence 357776 478999999997543
No 4
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=97.81 E-value=0.00012 Score=54.81 Aligned_cols=104 Identities=16% Similarity=0.190 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHH
Q psy15518 41 AVWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPG 120 (195)
Q Consensus 41 ~~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~ 120 (195)
+.+|..++++++.+....-..- ++....+ +...+..+|.++-++|.+|.++++-.+ + +
T Consensus 6 ~~f~~~i~~lIlls~~~~~~et-~~~~~~~----------~~~~l~~~d~~~~~iFt~E~~lRl~~~---~------~-- 63 (132)
T 1ors_C 6 PLVELGVSYAALLSVIVVVVEY-TMQLSGE----------YLVRLYLVDLILVIILWADYAYRAYKS---G------D-- 63 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HSCCCSH----------HHHHHHHHHHHHHHHHHHHHHHHHHHT---T------S--
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-chhhhHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHC---C------C--
Confidence 3578888888888877776664 2222211 114567899999999999999998854 1 1
Q ss_pred HHHHHcchhhhHhhhhhhccHHHHHhhcCCccccccchhhhHhhHHHHHHHH
Q psy15518 121 LIALHYLRGWFIIDLVAAIPFDLLIFGSETEETLDSRELPLSMSIEMHFKLL 172 (195)
Q Consensus 121 ~Ia~~Ylk~~F~~Dlis~lPl~~i~~~~~~~~~l~~~rl~rllk~~rlf~~l 172 (195)
..+|.+ |=++|+++++|...-... + +.++..|.+|++|+.|.+|+.
T Consensus 64 --~~~y~~-~niiDllailp~~~~~~~-~--~~l~~lr~lRllRv~Rvlkl~ 109 (132)
T 1ors_C 64 --PAGYVK-KTLYEIPALVPAGLLALI-E--GHLAGLGLFRLVRLLRFLRIL 109 (132)
T ss_dssp --TTTTTT-TCGGGTGGGSCHHHHHHH-H--HHHHHTTCHHHHHHHHHHHHH
T ss_pred --HHHHHH-HHHHHHHHHHHHHHHHHh-c--chHHHHHHHHHHHHHHHHHHH
Confidence 257888 889999999998654433 2 223344555555555555543
No 5
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=96.71 E-value=0.004 Score=51.69 Aligned_cols=100 Identities=13% Similarity=0.164 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHHH
Q psy15518 42 VWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGL 121 (195)
Q Consensus 42 ~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~~ 121 (195)
.++.+++++++.++......- ++.... .+...+..+|.++-++|.+|.++++... |
T Consensus 31 ~f~~~i~~li~l~~i~~~~~~-~~~~~~----------~~~~~l~~~e~~~~~iF~~E~~lrl~~~-----~-------- 86 (285)
T 3rvy_A 31 FFTKFIIYLIVLNGITMGLET-SKTFMQ----------SFGVYTTLFNQIVITIFTIEIILRIYVH-----R-------- 86 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CTTHHH----------HSHHHHHHHHHHHHHHHHHHHHHHHHTT-----G--------
T ss_pred HHHHHHHHHHHHHHHHHHHhc-Ccccch----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h--------
Confidence 567777777777777665543 111111 0124567889999999999999998742 3
Q ss_pred HHHHcchh-hhHhhhhhhccHHHHHhhcCCccccccchhhhHhhHHHHH
Q psy15518 122 IALHYLRG-WFIIDLVAAIPFDLLIFGSETEETLDSRELPLSMSIEMHF 169 (195)
Q Consensus 122 Ia~~Ylk~-~F~~Dlis~lPl~~i~~~~~~~~~l~~~rl~rllk~~rlf 169 (195)
.+|.++ |=++|+++++|..+- ..+.-..+|..|++|++|+.|..
T Consensus 87 --~~y~~~~wn~~Dl~~v~~~~i~--~~~~~~~lr~~RilR~lrl~~~~ 131 (285)
T 3rvy_A 87 --ISFFKDPWSLFDFFVVAISLVP--TSSGFEILRVLRVLRLFRLVTAV 131 (285)
T ss_dssp --GGGGGCHHHHHHHHHHHHHHSC--SSSSCTHHHHHGGGGGGHHHHSS
T ss_pred --HHHHcCChHHhHHHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHH
Confidence 679986 899999998886432 22221234444444444444443
No 6
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=96.27 E-value=0.0049 Score=52.58 Aligned_cols=109 Identities=8% Similarity=0.015 Sum_probs=59.3
Q ss_pred EccCChHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecC
Q psy15518 33 ILHYSPFKAVWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNAN 112 (195)
Q Consensus 33 i~P~s~~~~~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~ 112 (195)
..|+|+.. +.++++.++.++..+.... .+..... .......++.++-..|.+|+++++..+ .+
T Consensus 3 ~~p~s~~f---~~~~~~~i~ls~~~~~~~t-~~~~~~~----------~~~~~~~~~~~~~~~f~~e~~~r~~~~-~~-- 65 (355)
T 3beh_A 3 VLPFLRIY---APLNAVLAAPGLLAVAALT-IPDMSGR----------SRLALAALLAVIWGAYLLQLAATLLKR-RA-- 65 (355)
T ss_dssp ----CCSS---SSHHHHHHHHHHHHHHHHT-SSSCCHH----------HHHHHHHHHHHHHHHHHHHHHHHHHCC-CS--
T ss_pred CCchhHHH---HHHHHHHHHHHHHHHHHHc-ccchhhh----------HHHHHHHHHhHHHHHHHHHHHHhcccc-cc--
Confidence 46777643 6666666777776666663 2221110 002233445555566899999887422 11
Q ss_pred CeEEecHHHHHHHcch-hhhHhhhhhh-ccHHHHHhhcCCccccccchhhhHhhHHHHHH
Q psy15518 113 DEVVSNPGLIALHYLR-GWFIIDLVAA-IPFDLLIFGSETEETLDSRELPLSMSIEMHFK 170 (195)
Q Consensus 113 G~~V~d~~~Ia~~Ylk-~~F~~Dlis~-lPl~~i~~~~~~~~~l~~~rl~rllk~~rlf~ 170 (195)
. ..|.+ .|.++|++++ +|+...... ....++..|++|++|+.|..+
T Consensus 66 ~----------~~~~~~~~~i~Dl~~i~~p~~~~~~~--~~~~~r~lr~~R~lrl~r~~~ 113 (355)
T 3beh_A 66 G----------VVRDRTPKIAIDVLAVLVPLAAFLLD--GSPDWSLYCAVWLLKPLRDST 113 (355)
T ss_dssp C----------SSCCCHHHHHHHHHHHHHHHHHHHSC--CSGGGGGGGGGGGSHHHHTCS
T ss_pred c----------ceeccCcchHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHHH
Confidence 0 12444 4799999999 698765422 223455666666666666543
No 7
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=95.77 E-value=0.02 Score=45.89 Aligned_cols=108 Identities=14% Similarity=0.274 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHH
Q psy15518 41 AVWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPG 120 (195)
Q Consensus 41 ~~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~ 120 (195)
..+|..+.++++.++.....+- .+ ... .+......+|.++-++|.+|.+++.-.. |
T Consensus 12 ~~f~~~i~~~I~ln~i~l~~~~-~~-~~~----------~~~~~l~~~e~~~~~iF~~E~~lri~~~-----~------- 67 (229)
T 4dxw_A 12 RIFQFTVVSIIILNAVLIGATT-YE-LDP----------LFLETIHLLDYGITIFFVIEILIRFIGE-----K------- 67 (229)
T ss_dssp HHHHHHHHHHHHHHHHSTTTCC-SS-SCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHC--------------
T ss_pred chHHHHHHHHHHHHHHHHHHcc-CC-CCh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHc-----C-------
Confidence 3577888888888877655443 11 111 0124567889999999999999998732 2
Q ss_pred HHHHHcchh-hhHhhhhhhccHHHHHhhcCCccccccchhhhHhhHHHHHHHHH
Q psy15518 121 LIALHYLRG-WFIIDLVAAIPFDLLIFGSETEETLDSRELPLSMSIEMHFKLLT 173 (195)
Q Consensus 121 ~Ia~~Ylk~-~F~~Dlis~lPl~~i~~~~~~~~~l~~~rl~rllk~~rlf~~l~ 173 (195)
-.++|.++ |=.+|+++++|..+-.........+|..|+.|++|+.|..+.++
T Consensus 68 -~~~~y~~~~wni~D~~~v~~~~i~~~~~~~~~~lr~~RilR~lrl~~~~~~l~ 120 (229)
T 4dxw_A 68 -QKADFFKSGWNIFDTVIVAISLIPIPNNSSFLVLRLLRIFRVLRLISVIPELK 120 (229)
T ss_dssp --------CHHHHHHHHHHHHTTCC--------CCTTHHHHHHTTHHHHCHHHH
T ss_pred -chhHHhcCCcHHHHHHHHHHHHhhcCccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 13578885 78999776665422111111112335555555555555544443
No 8
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=41.36 E-value=5.6 Score=29.98 Aligned_cols=12 Identities=17% Similarity=-0.122 Sum_probs=0.0
Q ss_pred hhHhhhhhhccH
Q psy15518 130 WFIIDLVAAIPF 141 (195)
Q Consensus 130 ~F~~Dlis~lPl 141 (195)
+-+.|+++++|.
T Consensus 15 ~~~~dli~~lp~ 26 (155)
T 2a9h_A 15 EGRGRLIKHMPP 26 (155)
T ss_dssp ------------
T ss_pred hhHHHHHHHHHH
Confidence 468899999998
No 9
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=30.16 E-value=26 Score=25.20 Aligned_cols=21 Identities=10% Similarity=-0.073 Sum_probs=9.8
Q ss_pred cccchhhhHhhHHHHHHHHHH
Q psy15518 154 LDSRELPLSMSIEMHFKLLTS 174 (195)
Q Consensus 154 l~~~rl~rllk~~rlf~~l~~ 174 (195)
+|..|+.|++|+.|..+.++.
T Consensus 97 lRllRv~Rvlkl~r~~~~l~~ 117 (132)
T 1ors_C 97 FRLVRLLRFLRILLIISRGSK 117 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHH
Confidence 344444555555554444433
No 10
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=12.32 E-value=1.1e+02 Score=15.28 Aligned_cols=13 Identities=0% Similarity=0.376 Sum_probs=0.0
Q ss_pred eeEEecCCeEEec
Q psy15518 106 TTYVNANDEVVSN 118 (195)
Q Consensus 106 t~y~d~~G~~V~d 118 (195)
+-+||.+|+.|.+
T Consensus 7 s~IYD~~g~~i~~ 19 (26)
T 2v2f_A 7 SKIYDNKNQLIAD 19 (26)
T ss_pred CEEEeCCCCEeee
Done!