Query psy1552
Match_columns 220
No_of_seqs 218 out of 985
Neff 5.2
Searched_HMMs 46136
Date Fri Aug 16 23:25:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1552.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1552hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605|consensus 100.0 5.7E-43 1.2E-47 311.0 10.9 173 19-192 31-261 (262)
2 KOG2832|consensus 100.0 1.2E-32 2.6E-37 252.7 8.0 142 56-197 170-350 (393)
3 TIGR02251 HIF-SF_euk Dullard-l 100.0 2.3E-31 5E-36 219.9 9.2 110 73-182 1-162 (162)
4 PF03031 NIF: NLI interacting 100.0 4.5E-30 9.8E-35 208.1 8.5 111 74-184 1-159 (159)
5 TIGR02245 HAD_IIID1 HAD-superf 100.0 2.8E-29 6.1E-34 215.0 10.1 123 70-192 18-193 (195)
6 COG5190 FCP1 TFIIF-interacting 99.9 4.3E-26 9.3E-31 212.3 4.8 134 59-192 198-383 (390)
7 TIGR02250 FCP1_euk FCP1-like p 99.9 5.2E-23 1.1E-27 170.0 6.3 67 90-159 85-154 (156)
8 smart00577 CPDc catalytic doma 99.7 1.7E-17 3.6E-22 134.6 7.0 76 90-165 72-148 (148)
9 KOG0323|consensus 98.8 6.8E-09 1.5E-13 102.5 6.5 67 90-159 228-297 (635)
10 TIGR01686 FkbH FkbH-like domai 95.2 0.0097 2.1E-07 54.0 1.7 23 123-145 94-116 (320)
11 TIGR01681 HAD-SF-IIIC HAD-supe 94.5 0.012 2.7E-07 46.5 0.5 23 122-144 96-120 (128)
12 PRK13288 pyrophosphatase PpaX; 93.7 0.045 9.8E-07 45.9 2.3 34 121-154 144-177 (214)
13 cd01427 HAD_like Haloacid deha 93.3 0.05 1.1E-06 40.3 1.8 14 75-88 1-14 (139)
14 PF13419 HAD_2: Haloacid dehal 93.1 0.049 1.1E-06 42.5 1.5 41 104-144 119-162 (176)
15 TIGR01993 Pyr-5-nucltdase pyri 92.4 0.1 2.3E-06 42.7 2.7 19 125-143 151-169 (184)
16 COG3882 FkbH Predicted enzyme 90.8 0.082 1.8E-06 51.8 0.4 40 122-161 317-357 (574)
17 PLN03243 haloacid dehalogenase 90.6 0.22 4.7E-06 44.2 2.9 33 121-153 171-203 (260)
18 PHA02530 pseT polynucleotide k 89.6 0.12 2.6E-06 45.7 0.4 84 71-154 156-291 (300)
19 TIGR01685 MDP-1 magnesium-depe 89.5 0.22 4.9E-06 42.1 2.0 27 129-155 127-153 (174)
20 TIGR01662 HAD-SF-IIIA HAD-supe 88.7 0.34 7.3E-06 37.5 2.3 24 121-144 91-116 (132)
21 PRK13225 phosphoglycolate phos 88.6 0.27 6E-06 43.9 2.0 16 73-88 62-77 (273)
22 PRK13222 phosphoglycolate phos 88.0 0.53 1.2E-05 39.2 3.3 16 73-88 6-21 (226)
23 TIGR01454 AHBA_synth_RP 3-amin 87.9 0.26 5.6E-06 41.0 1.4 65 90-154 103-170 (205)
24 COG0637 Predicted phosphatase/ 87.2 0.26 5.6E-06 42.5 0.9 26 120-145 147-172 (221)
25 PLN02575 haloacid dehalogenase 87.1 0.6 1.3E-05 44.3 3.4 26 121-146 278-303 (381)
26 TIGR01672 AphA HAD superfamily 86.3 0.44 9.6E-06 42.2 2.0 17 73-89 63-79 (237)
27 TIGR00213 GmhB_yaeD D,D-heptos 85.0 1 2.2E-05 37.0 3.4 34 120-153 111-144 (176)
28 PF05152 DUF705: Protein of un 84.7 1.2 2.6E-05 41.0 4.0 94 72-166 121-279 (297)
29 COG2179 Predicted hydrolase of 83.8 0.41 8.9E-06 41.0 0.5 91 69-160 24-142 (175)
30 PLN02940 riboflavin kinase 83.2 0.65 1.4E-05 43.5 1.7 26 121-146 156-181 (382)
31 PF13344 Hydrolase_6: Haloacid 83.0 0.83 1.8E-05 34.9 1.9 55 76-131 1-57 (101)
32 PRK11587 putative phosphatase; 82.8 0.78 1.7E-05 38.7 1.8 19 73-91 3-21 (218)
33 PRK13226 phosphoglycolate phos 82.5 0.84 1.8E-05 39.0 2.0 18 74-91 13-30 (229)
34 KOG3109|consensus 82.3 1.4 2.9E-05 39.5 3.2 19 71-89 13-31 (244)
35 PRK10444 UMP phosphatase; Prov 82.2 1.2 2.6E-05 39.2 2.9 30 74-103 2-33 (248)
36 PRK10725 fructose-1-P/6-phosph 81.9 0.89 1.9E-05 36.9 1.8 27 73-99 5-31 (188)
37 TIGR03351 PhnX-like phosphonat 81.1 1.3 2.9E-05 36.9 2.7 19 74-92 2-20 (220)
38 TIGR01548 HAD-SF-IA-hyp1 haloa 80.4 1.4 3.1E-05 36.5 2.5 25 75-99 2-26 (197)
39 TIGR01533 lipo_e_P4 5'-nucleot 80.0 0.98 2.1E-05 40.8 1.6 18 71-88 73-90 (266)
40 PF08282 Hydrolase_3: haloacid 79.7 1 2.2E-05 37.1 1.5 14 76-89 1-14 (254)
41 PTZ00174 phosphomannomutase; P 79.2 1.5 3.4E-05 38.0 2.5 18 72-89 4-21 (247)
42 PF03767 Acid_phosphat_B: HAD 78.6 1.3 2.7E-05 38.8 1.8 19 71-89 70-88 (229)
43 PF12689 Acid_PPase: Acid Phos 78.4 1.3 2.9E-05 37.4 1.8 51 90-144 74-136 (169)
44 TIGR02252 DREG-2 REG-2-like, H 77.7 2 4.3E-05 35.5 2.6 20 74-93 1-20 (203)
45 PRK09484 3-deoxy-D-manno-octul 77.2 1.3 2.9E-05 36.8 1.5 24 123-146 103-126 (183)
46 PHA02597 30.2 hypothetical pro 77.1 1.4 3.1E-05 36.3 1.7 16 73-88 2-17 (197)
47 PRK13223 phosphoglycolate phos 76.9 1.6 3.5E-05 38.6 2.0 17 73-89 13-29 (272)
48 PRK11590 hypothetical protein; 76.3 1.6 3.5E-05 36.9 1.8 18 71-88 4-21 (211)
49 TIGR02253 CTE7 HAD superfamily 75.1 1.6 3.5E-05 36.3 1.4 16 74-89 3-18 (221)
50 TIGR01549 HAD-SF-IA-v1 haloaci 75.0 1.7 3.7E-05 34.1 1.5 25 75-99 1-25 (154)
51 PRK03669 mannosyl-3-phosphogly 75.0 2.4 5.3E-05 37.1 2.6 19 71-89 5-23 (271)
52 TIGR01261 hisB_Nterm histidino 74.9 3.5 7.6E-05 34.0 3.4 14 74-87 2-15 (161)
53 PLN02770 haloacid dehalogenase 74.8 1.9 4.2E-05 37.4 1.9 20 73-92 22-41 (248)
54 PHA03398 viral phosphatase sup 74.2 3.9 8.6E-05 37.9 3.8 19 71-89 126-144 (303)
55 TIGR02009 PGMB-YQAB-SF beta-ph 74.1 2.1 4.7E-05 34.4 1.9 23 74-96 2-24 (185)
56 PLN02779 haloacid dehalogenase 73.8 2.6 5.6E-05 37.7 2.5 28 73-100 40-68 (286)
57 PRK08238 hypothetical protein; 73.7 2.1 4.5E-05 41.7 2.0 19 71-89 8-26 (479)
58 PRK10826 2-deoxyglucose-6-phos 73.7 2.3 4.9E-05 35.8 2.0 18 72-89 6-23 (222)
59 PRK00192 mannosyl-3-phosphogly 73.2 2.9 6.3E-05 36.6 2.7 31 72-102 3-36 (273)
60 TIGR01684 viral_ppase viral ph 72.8 4.7 0.0001 37.3 4.0 19 71-89 124-142 (301)
61 PRK11009 aphA acid phosphatase 72.6 2.4 5.2E-05 37.6 2.0 17 72-88 62-78 (237)
62 TIGR01990 bPGM beta-phosphoglu 71.3 2.4 5.2E-05 34.1 1.6 22 75-96 1-22 (185)
63 TIGR02254 YjjG/YfnB HAD superf 71.2 3.2 6.9E-05 34.4 2.3 16 74-89 2-17 (224)
64 TIGR01452 PGP_euk phosphoglyco 71.0 3.9 8.4E-05 36.2 2.9 30 74-103 3-34 (279)
65 PRK14988 GMP/IMP nucleotidase; 71.0 3 6.5E-05 35.8 2.2 18 71-88 8-25 (224)
66 PRK08942 D,D-heptose 1,7-bisph 70.4 4.8 0.0001 33.0 3.2 25 121-145 109-133 (181)
67 PRK10513 sugar phosphate phosp 70.3 3 6.4E-05 36.1 2.0 17 73-89 3-19 (270)
68 PRK01158 phosphoglycolate phos 69.8 3.1 6.8E-05 34.9 2.0 16 74-89 4-19 (230)
69 PRK10530 pyridoxal phosphate ( 69.6 3.6 7.9E-05 35.3 2.4 16 73-88 3-18 (272)
70 COG0546 Gph Predicted phosphat 69.3 3.7 7.9E-05 35.0 2.3 18 72-89 3-20 (220)
71 TIGR01456 CECR5 HAD-superfamil 69.3 4.5 9.7E-05 36.8 3.0 27 75-101 2-30 (321)
72 PRK10976 putative hydrolase; P 69.2 3.7 8E-05 35.5 2.4 16 74-89 3-18 (266)
73 TIGR01449 PGP_bact 2-phosphogl 69.2 2.3 5E-05 35.1 1.1 14 76-89 1-14 (213)
74 TIGR01668 YqeG_hyp_ppase HAD s 69.1 2.4 5.1E-05 34.9 1.1 73 71-143 23-119 (170)
75 TIGR02247 HAD-1A3-hyp Epoxide 67.6 3.3 7.1E-05 34.4 1.6 16 74-89 3-18 (211)
76 TIGR02461 osmo_MPG_phos mannos 67.5 4.1 8.9E-05 35.2 2.3 29 75-103 1-31 (225)
77 TIGR01487 SPP-like sucrose-pho 67.2 4 8.6E-05 34.2 2.1 15 74-88 2-16 (215)
78 TIGR01428 HAD_type_II 2-haloal 67.0 2.7 5.8E-05 34.6 1.0 16 74-89 2-17 (198)
79 PRK12702 mannosyl-3-phosphogly 66.2 4.8 0.0001 37.3 2.6 30 74-103 2-34 (302)
80 TIGR01458 HAD-SF-IIA-hyp3 HAD- 66.2 5.9 0.00013 34.8 3.1 30 74-103 2-37 (257)
81 TIGR01482 SPP-subfamily Sucros 66.2 3.1 6.8E-05 34.7 1.3 14 76-89 1-14 (225)
82 COG5190 FCP1 TFIIF-interacting 66.0 4 8.7E-05 39.0 2.1 53 113-165 173-225 (390)
83 PRK13478 phosphonoacetaldehyde 65.4 3.5 7.5E-05 36.0 1.4 16 73-88 4-19 (267)
84 TIGR01484 HAD-SF-IIB HAD-super 65.3 4.2 9.2E-05 33.6 1.9 13 76-88 2-14 (204)
85 TIGR01689 EcbF-BcbF capsule bi 65.0 3.6 7.9E-05 33.1 1.4 15 74-88 2-16 (126)
86 TIGR01509 HAD-SF-IA-v3 haloaci 64.8 3.1 6.7E-05 33.1 1.0 16 75-90 1-16 (183)
87 TIGR01491 HAD-SF-IB-PSPlk HAD- 64.4 3.8 8.2E-05 33.3 1.4 16 73-88 4-19 (201)
88 PRK09449 dUMP phosphatase; Pro 63.4 3.4 7.5E-05 34.5 1.0 15 74-88 4-18 (224)
89 PLN02645 phosphoglycolate phos 63.3 7.1 0.00015 35.3 3.1 28 73-100 28-57 (311)
90 COG0561 Cof Predicted hydrolas 63.3 4.8 0.0001 34.8 1.9 17 73-89 3-19 (264)
91 TIGR01675 plant-AP plant acid 63.1 4.1 8.8E-05 36.2 1.5 19 71-89 75-93 (229)
92 PRK10748 flavin mononucleotide 63.1 3.5 7.7E-05 35.4 1.0 17 73-89 10-26 (238)
93 PRK06769 hypothetical protein; 62.8 7.5 0.00016 32.0 2.9 27 120-146 98-124 (173)
94 PRK15126 thiamin pyrimidine py 62.7 5.2 0.00011 34.8 2.0 15 74-88 3-17 (272)
95 TIGR01493 HAD-SF-IA-v2 Haloaci 62.7 4.9 0.00011 32.2 1.7 21 76-96 2-22 (175)
96 PRK10563 6-phosphogluconate ph 62.5 4.9 0.00011 33.6 1.8 17 73-89 4-20 (221)
97 TIGR01422 phosphonatase phosph 62.4 4.7 0.0001 34.7 1.7 15 74-88 3-17 (253)
98 PRK13582 thrH phosphoserine ph 61.7 4.3 9.3E-05 33.4 1.3 16 74-89 2-17 (205)
99 TIGR00338 serB phosphoserine p 60.8 5 0.00011 33.5 1.5 19 71-89 12-30 (219)
100 PRK06698 bifunctional 5'-methy 60.7 5.2 0.00011 38.1 1.8 20 74-93 242-261 (459)
101 TIGR02463 MPGP_rel mannosyl-3- 60.3 4.4 9.6E-05 33.9 1.2 13 76-88 2-14 (221)
102 TIGR00099 Cof-subfamily Cof su 60.0 5.7 0.00012 34.1 1.8 14 76-89 2-15 (256)
103 PF09419 PGP_phosphatase: Mito 59.9 7.2 0.00016 33.0 2.3 31 69-99 37-68 (168)
104 TIGR01457 HAD-SF-IIA-hyp2 HAD- 59.6 8.9 0.00019 33.5 3.0 30 74-103 2-33 (249)
105 TIGR01485 SPP_plant-cyano sucr 57.7 8.3 0.00018 33.2 2.4 14 73-86 1-14 (249)
106 COG2503 Predicted secreted aci 57.2 5.5 0.00012 36.3 1.2 91 71-162 77-202 (274)
107 PLN02423 phosphomannomutase 56.7 7.8 0.00017 33.9 2.1 17 73-89 7-23 (245)
108 TIGR01664 DNA-3'-Pase DNA 3'-p 56.4 7.3 0.00016 32.2 1.8 16 72-87 12-27 (166)
109 COG1011 Predicted hydrolase (H 56.1 6.3 0.00014 32.7 1.4 18 72-89 3-20 (229)
110 PLN02954 phosphoserine phospha 55.3 6.9 0.00015 32.7 1.5 18 72-89 11-28 (224)
111 PF08645 PNK3P: Polynucleotide 54.4 7.4 0.00016 32.1 1.5 16 74-89 1-16 (159)
112 TIGR01656 Histidinol-ppas hist 54.3 8 0.00017 30.8 1.7 15 74-88 1-15 (147)
113 TIGR01670 YrbI-phosphatas 3-de 54.0 7.5 0.00016 31.4 1.5 13 74-86 2-14 (154)
114 TIGR01489 DKMTPPase-SF 2,3-dik 53.5 7.9 0.00017 30.9 1.5 17 73-89 1-17 (188)
115 TIGR01486 HAD-SF-IIB-MPGP mann 52.9 6.5 0.00014 34.0 1.0 14 76-89 2-15 (256)
116 PRK10187 trehalose-6-phosphate 52.0 11 0.00023 33.5 2.2 16 72-87 13-28 (266)
117 PRK09456 ?-D-glucose-1-phospha 51.6 8.3 0.00018 32.0 1.4 15 75-89 2-16 (199)
118 TIGR01663 PNK-3'Pase polynucle 50.8 15 0.00033 36.4 3.3 16 72-87 167-182 (526)
119 TIGR00685 T6PP trehalose-phosp 48.6 9.7 0.00021 33.0 1.4 16 72-87 2-17 (244)
120 TIGR01680 Veg_Stor_Prot vegeta 47.8 11 0.00023 34.6 1.5 18 72-89 100-117 (275)
121 TIGR02471 sucr_syn_bact_C sucr 47.6 8.3 0.00018 32.8 0.8 14 76-89 2-15 (236)
122 smart00775 LNS2 LNS2 domain. T 47.1 10 0.00022 31.2 1.2 28 76-103 2-43 (157)
123 TIGR02137 HSK-PSP phosphoserin 46.7 9.1 0.0002 32.7 0.9 15 75-89 3-17 (203)
124 TIGR01545 YfhB_g-proteo haloac 46.1 11 0.00025 32.2 1.4 18 72-89 4-21 (210)
125 PF05116 S6PP: Sucrose-6F-phos 45.8 11 0.00024 33.0 1.4 13 73-85 2-14 (247)
126 PRK09552 mtnX 2-hydroxy-3-keto 44.0 12 0.00027 31.5 1.3 17 73-89 3-19 (219)
127 PRK14502 bifunctional mannosyl 43.7 20 0.00043 36.9 2.9 18 71-88 414-431 (694)
128 PLN02887 hydrolase family prot 42.4 16 0.00035 36.5 2.0 18 72-89 307-324 (580)
129 PLN02919 haloacid dehalogenase 40.6 24 0.00051 37.8 3.0 17 73-89 75-91 (1057)
130 PRK11133 serB phosphoserine ph 40.0 20 0.00043 33.0 2.1 18 71-88 108-125 (322)
131 KOG2914|consensus 39.6 23 0.0005 31.3 2.3 30 74-103 11-40 (222)
132 COG4996 Predicted phosphatase 39.5 33 0.00071 28.8 3.1 81 92-176 71-160 (164)
133 TIGR01460 HAD-SF-IIA Haloacid 38.9 20 0.00043 31.0 1.8 24 76-99 1-26 (236)
134 TIGR01488 HAD-SF-IB Haloacid D 38.0 15 0.00032 29.2 0.9 13 76-88 2-14 (177)
135 PLN02382 probable sucrose-phos 37.0 19 0.0004 34.3 1.5 16 72-87 8-23 (413)
136 COG0560 SerB Phosphoserine pho 36.5 20 0.00044 30.9 1.5 16 72-87 4-19 (212)
137 PF12710 HAD: haloacid dehalog 36.5 17 0.00038 29.0 1.0 13 76-88 1-13 (192)
138 COG0647 NagD Predicted sugar p 35.2 30 0.00066 31.4 2.5 32 72-103 7-40 (269)
139 PF00702 Hydrolase: haloacid d 35.1 33 0.00071 27.7 2.5 18 74-91 2-19 (215)
140 TIGR01490 HAD-SF-IB-hyp1 HAD-s 34.4 18 0.00039 29.6 0.8 13 76-88 2-14 (202)
141 COG0241 HisB Histidinol phosph 33.1 28 0.00061 29.9 1.8 48 95-142 76-132 (181)
142 PLN03017 trehalose-phosphatase 32.5 25 0.00054 33.4 1.5 15 71-85 109-123 (366)
143 TIGR02726 phenyl_P_delta pheny 31.7 24 0.00053 29.4 1.2 21 124-144 90-110 (169)
144 COG3700 AphA Acid phosphatase 30.2 49 0.0011 29.2 2.8 17 72-88 62-78 (237)
145 PRK05446 imidazole glycerol-ph 29.6 75 0.0016 29.9 4.2 15 73-87 2-16 (354)
146 PF11019 DUF2608: Protein of u 29.6 24 0.00053 31.3 0.9 10 76-85 23-32 (252)
147 PRK10725 fructose-1-P/6-phosph 29.5 35 0.00076 27.4 1.7 58 90-147 114-174 (188)
148 PLN02151 trehalose-phosphatase 29.3 30 0.00065 32.7 1.4 14 72-85 97-110 (354)
149 COG3769 Predicted hydrolase (H 28.9 40 0.00087 30.6 2.1 82 72-160 6-89 (274)
150 TIGR02603 CxxCH_TIGR02603 puta 28.5 85 0.0018 24.9 3.8 21 157-177 113-133 (133)
151 COG1877 OtsB Trehalose-6-phosp 27.6 38 0.00083 30.7 1.8 19 71-89 16-34 (266)
152 PF06941 NT5C: 5' nucleotidase 27.0 34 0.00073 28.4 1.2 14 74-87 3-16 (191)
153 PHA00028 rep RNA replicase, be 26.3 1E+02 0.0022 31.0 4.5 87 90-208 348-449 (561)
154 TIGR01459 HAD-SF-IIA-hyp4 HAD- 26.1 59 0.0013 27.9 2.6 28 73-100 8-37 (242)
155 PLN02177 glycerol-3-phosphate 24.8 47 0.001 32.7 2.0 17 72-88 21-37 (497)
156 KOG2832|consensus 22.4 2.5 5.5E-05 40.2 -7.0 71 108-178 129-200 (393)
157 KOG3120|consensus 21.7 99 0.0021 28.0 3.2 18 71-88 11-28 (256)
158 COG5083 SMP2 Uncharacterized p 21.3 95 0.0021 30.8 3.2 32 72-103 374-419 (580)
159 PTZ00445 p36-lilke protein; Pr 20.3 45 0.00097 29.7 0.7 24 124-147 170-193 (219)
No 1
>KOG1605|consensus
Probab=100.00 E-value=5.7e-43 Score=310.99 Aligned_cols=173 Identities=42% Similarity=0.629 Sum_probs=139.9
Q ss_pred ccccccccccccccccccCCCCCCCCCCCCCCCCC-C----CCCCCCCCCCCCcccCCCCceEEEecCcceeecc--c--
Q psy1552 19 KKARKGIFRSLLCCFRGNHSSSNVSKASGGSEGQY-S----PPHSPVRLLPPIRHQDMHKKCMVIDLDETLVHSS--F-- 89 (220)
Q Consensus 19 ~~~~~~~~~~l~cc~~~~~~~~~~~~~~~~~~~~~-~----p~~~~~~LLP~~~~~~~~k~tLVLDLDETLVhss--~-- 89 (220)
.+.....-++++||.+................+++ . ......+++|...+ ..+|+|||||||||||||+ +
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~kk~lVLDLDeTLvHss~~~~~ 109 (262)
T KOG1605|consen 31 MMLVEDSSQSSSNASSAFSPEFDEELYSEDLFEKYQPVKYASQTPLSPVLPLRLA-TVGRKTLVLDLDETLVHSSLNLKP 109 (262)
T ss_pred ceeccccccchhhhhhccccccchhhhhhhhhhhcccccccccccccccCCcccc-cCCCceEEEeCCCcccccccccCC
Confidence 44555666677777764432111110010111122 1 12245567776554 7899999999999999999 4
Q ss_pred ------------------------------------------------ccHHHHHHhhcC-CCccceEEEecCeeeecCc
Q psy1552 90 ------------------------------------------------KYADPVADLLDR-WGVFRARLFRESCVFHHGN 120 (220)
Q Consensus 90 ------------------------------------------------~YAd~Vid~LDp-~g~f~~rLyResC~~~~g~ 120 (220)
.||++|+|.||| +++|++||||++|++.+|+
T Consensus 110 ~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~ 189 (262)
T KOG1605|consen 110 IVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGN 189 (262)
T ss_pred CCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECCc
Confidence 799999999999 7899999999999999999
Q ss_pred ccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCCCCchHHHHHHHHHhhccCCCChHHHHhhcCC
Q psy1552 121 YVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDTELYDLVPFFERLSKMDSVYSFLRNSNH 192 (220)
Q Consensus 121 yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~eLl~Llp~Le~L~~~~DVR~vL~~~~~ 192 (220)
|+|||+.+||||++||||||+|.+|.+||+|||||++|+.|+.|+||++|+|||++|+.++|||+++++..+
T Consensus 190 yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~LlpfLe~L~~~~Dvr~~l~~~~~ 261 (262)
T KOG1605|consen 190 YVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLKLLPFLEALAFVDDVRPILARRFG 261 (262)
T ss_pred EEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHHHHHHHHHhcccccHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998653
No 2
>KOG2832|consensus
Probab=99.97 E-value=1.2e-32 Score=252.68 Aligned_cols=142 Identities=32% Similarity=0.571 Sum_probs=133.4
Q ss_pred CCCCCCCCCC--CcccCCCCceEEEecCcceeeccc-----------------------------------ccHHHHHHh
Q psy1552 56 PHSPVRLLPP--IRHQDMHKKCMVIDLDETLVHSSF-----------------------------------KYADPVADL 98 (220)
Q Consensus 56 ~~~~~~LLP~--~~~~~~~k~tLVLDLDETLVhss~-----------------------------------~YAd~Vid~ 98 (220)
.+....|||+ +.|..+.++||||+|.++|||..| +||.+++|.
T Consensus 170 EP~~~~LLPdpl~pPy~Qp~yTLVleledvLVhpdws~~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~ 249 (393)
T KOG2832|consen 170 EPDRAKLLPDPLPPPYEQPPYTLVLELEDVLVHPDWSYKTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDA 249 (393)
T ss_pred CCchhhhCCCCCCCcccCCCceEEEEeeeeEeccchhhhcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHhh
Confidence 3567789998 677788999999999999999987 789999999
Q ss_pred hcCCCccceEEEecCeeeecCcccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCCCCchHHHHHHHHHhhcc
Q psy1552 99 LDRWGVFRARLFRESCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDTELYDLVPFFERLS 178 (220)
Q Consensus 99 LDp~g~f~~rLyResC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~eLl~Llp~Le~L~ 178 (220)
|||+|+|+++|||++|.+.+|.++|||+.|||||++||+||-.+.++.+||+|+|++++|.|+++|+.|++|++||+.|+
T Consensus 250 lDP~g~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~~ia 329 (393)
T KOG2832|consen 250 LDPKGYISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLEYIA 329 (393)
T ss_pred cCCcceEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred --CCCChHHHHhhcCCCCCCC
Q psy1552 179 --KMDSVYSFLRNSNHPYNMQ 197 (220)
Q Consensus 179 --~~~DVR~vL~~~~~~~~~~ 197 (220)
+++|||++|+.|....++.
T Consensus 330 ~~~~eDvR~vL~~y~~~~D~~ 350 (393)
T KOG2832|consen 330 QQQVEDVRPVLQSYSQEKDPA 350 (393)
T ss_pred HccHHHHHHHHHHhccccCHH
Confidence 7999999999998855544
No 3
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=2.3e-31 Score=219.93 Aligned_cols=110 Identities=63% Similarity=1.078 Sum_probs=106.0
Q ss_pred CceEEEecCcceeeccc---------------------------------------------------ccHHHHHHhhcC
Q psy1552 73 KKCMVIDLDETLVHSSF---------------------------------------------------KYADPVADLLDR 101 (220)
Q Consensus 73 k~tLVLDLDETLVhss~---------------------------------------------------~YAd~Vid~LDp 101 (220)
|+|||||||||||||++ .||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 68999999999999975 799999999999
Q ss_pred CC-ccceEEEecCeeeecCcccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCCCCchHHHHHHHHHhhccCC
Q psy1552 102 WG-VFRARLFRESCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDTELYDLVPFFERLSKM 180 (220)
Q Consensus 102 ~g-~f~~rLyResC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~eLl~Llp~Le~L~~~ 180 (220)
.+ +|.+++||++|+...|.|+|||+++||++++||||||+|..|..||+|||+|.+|.|+.+|+||++|++||+.|+.+
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q psy1552 181 DS 182 (220)
Q Consensus 181 ~D 182 (220)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 86
No 4
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=99.96 E-value=4.5e-30 Score=208.13 Aligned_cols=111 Identities=53% Similarity=0.965 Sum_probs=93.9
Q ss_pred ceEEEecCcceeecc-----------------c-----------------------------ccHHHHHHhhcCC-Cccc
Q psy1552 74 KCMVIDLDETLVHSS-----------------F-----------------------------KYADPVADLLDRW-GVFR 106 (220)
Q Consensus 74 ~tLVLDLDETLVhss-----------------~-----------------------------~YAd~Vid~LDp~-g~f~ 106 (220)
+||||||||||||+. + .||++|++.|||. ..|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~ 80 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFS 80 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEE
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhccccc
Confidence 699999999999986 1 7999999999995 6899
Q ss_pred eEEEecCeeeecCcccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCC-CCchHHHHHHHHHhhccCCCChH
Q psy1552 107 ARLFRESCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDD-MTDTELYDLVPFFERLSKMDSVY 184 (220)
Q Consensus 107 ~rLyResC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd-~~D~eLl~Llp~Le~L~~~~DVR 184 (220)
+++||++|....|.++|||+++||++++||||||+|.+|..|++|+|+|++|.++ .+|++|.+|+++|+.|++++|||
T Consensus 81 ~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~Dvr 159 (159)
T PF03031_consen 81 RRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKEDDVR 159 (159)
T ss_dssp EEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS-CH
T ss_pred cccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCcccCCC
Confidence 9999999999988889999999999999999999999999999999999999999 99999999999999999999998
No 5
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=99.96 E-value=2.8e-29 Score=215.04 Aligned_cols=123 Identities=20% Similarity=0.350 Sum_probs=105.8
Q ss_pred CCCCceEEEecCcceeeccc----------------------------------ccHHHHHHhhcCC--CccceEEEecC
Q psy1552 70 DMHKKCMVIDLDETLVHSSF----------------------------------KYADPVADLLDRW--GVFRARLFRES 113 (220)
Q Consensus 70 ~~~k~tLVLDLDETLVhss~----------------------------------~YAd~Vid~LDp~--g~f~~rLyRes 113 (220)
..+|+||||||||||||+.. .||+++++.|++. ..+..++++++
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~ 97 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDS 97 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEecc
Confidence 46899999999999999731 7999999999763 24667788899
Q ss_pred ee------eecCcc-ccccccc----c--cccCcEEEEeCCCCccccCCCceeecCCCCC----CCCchHHHHHHHHHhh
Q psy1552 114 CV------FHHGNY-VKDLNKL----G--RDLHQVIIVDNSPASYIFHPDNAVPVASWFD----DMTDTELYDLVPFFER 176 (220)
Q Consensus 114 C~------~~~g~y-vKDLs~L----g--RdL~rVIIVDnsp~s~~~qpdN~I~I~~f~g----d~~D~eLl~Llp~Le~ 176 (220)
|. +..|.+ +|||+.+ | +++++||||||+|.+|.+||+|||+|++|++ +.+|+||++|+|||+.
T Consensus 98 ~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~~~~D~eL~~L~~yL~~ 177 (195)
T TIGR02245 98 TAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHANRGTDQELLKLTQYLKT 177 (195)
T ss_pred ccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCCCcccHHHHHHHHHHHH
Confidence 83 335654 9999987 3 4889999999999999999999999999995 5799999999999999
Q ss_pred ccCCCChHHHHhhcCC
Q psy1552 177 LSKMDSVYSFLRNSNH 192 (220)
Q Consensus 177 L~~~~DVR~vL~~~~~ 192 (220)
|+.++|||+++.+...
T Consensus 178 la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 178 IAELEDFSSLDHKEWE 193 (195)
T ss_pred HhcCcccchhhhcccc
Confidence 9999999999987543
No 6
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.92 E-value=4.3e-26 Score=212.31 Aligned_cols=134 Identities=54% Similarity=0.904 Sum_probs=126.3
Q ss_pred CCCCCCCCcccCCCCceEEEecCcceeeccc-------------------------------------------------
Q psy1552 59 PVRLLPPIRHQDMHKKCMVIDLDETLVHSSF------------------------------------------------- 89 (220)
Q Consensus 59 ~~~LLP~~~~~~~~k~tLVLDLDETLVhss~------------------------------------------------- 89 (220)
...|+|+.......++||++||||||+||++
T Consensus 198 ~~~l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~ 277 (390)
T COG5190 198 IDTLEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASV 277 (390)
T ss_pred cccccchhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecch
Confidence 3578888888888999999999999999986
Q ss_pred -ccHHHHHHhhcCCCccceEEEecCeeeecCcccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCCCCchHHH
Q psy1552 90 -KYADPVADLLDRWGVFRARLFRESCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDTELY 168 (220)
Q Consensus 90 -~YAd~Vid~LDp~g~f~~rLyResC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~eLl 168 (220)
.||++|+++||+.++|.+++||++|+...|.|+|||+.+||++.+|||||++|.+|.+||+|+|+|.+|++++.|.+|+
T Consensus 278 ~~y~~~v~d~l~~~k~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~ 357 (390)
T COG5190 278 KRYADPVLDILDSDKVFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELL 357 (390)
T ss_pred hhhcchHHHhccccceeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhh
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccC--CCChHHHHhhcCC
Q psy1552 169 DLVPFFERLSK--MDSVYSFLRNSNH 192 (220)
Q Consensus 169 ~Llp~Le~L~~--~~DVR~vL~~~~~ 192 (220)
.|++||+.|.. +.||+.+|...-.
T Consensus 358 ~ll~~le~L~~~~~~d~~~~l~~~~~ 383 (390)
T COG5190 358 NLLPFLEDLPDRDLKDVSSILQSRLE 383 (390)
T ss_pred hhcccccccccccchhhhhhhhhhhH
Confidence 99999999986 9999999876543
No 7
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.88 E-value=5.2e-23 Score=170.04 Aligned_cols=67 Identities=25% Similarity=0.408 Sum_probs=61.0
Q ss_pred ccHHHHHHhhcCCC-ccceE-EEecCeeeecCccccccc-ccccccCcEEEEeCCCCccccCCCceeecCCCC
Q psy1552 90 KYADPVADLLDRWG-VFRAR-LFRESCVFHHGNYVKDLN-KLGRDLHQVIIVDNSPASYIFHPDNAVPVASWF 159 (220)
Q Consensus 90 ~YAd~Vid~LDp~g-~f~~r-LyResC~~~~g~yvKDLs-~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~ 159 (220)
.||++|++.|||.+ +|.+| ++|++|. |.++|||+ .+|+|+++||||||+|.+|..||+|+|+|++|.
T Consensus 85 ~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 85 AYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred HHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 79999999999996 78666 5799996 78999995 469999999999999999999999999999996
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.71 E-value=1.7e-17 Score=134.58 Aligned_cols=76 Identities=58% Similarity=1.010 Sum_probs=70.0
Q ss_pred ccHHHHHHhhcCCC-ccceEEEecCeeeecCcccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCCCCch
Q psy1552 90 KYADPVADLLDRWG-VFRARLFRESCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDT 165 (220)
Q Consensus 90 ~YAd~Vid~LDp~g-~f~~rLyResC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~ 165 (220)
.||+.+++.+++.. +|...+++++|......|.|+|+++|++.+++|+|||++..+..+++|+|.|++|.++.+|+
T Consensus 72 ~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 72 MYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred HHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 68999999999865 56889999999987767999999999999999999999999999999999999999998884
No 9
>KOG0323|consensus
Probab=98.80 E-value=6.8e-09 Score=102.47 Aligned_cols=67 Identities=27% Similarity=0.287 Sum_probs=54.6
Q ss_pred ccHHHHHHhhcCCC-ccceEE-EecCeeeecCcccccccccc-cccCcEEEEeCCCCccccCCCceeecCCCC
Q psy1552 90 KYADPVADLLDRWG-VFRARL-FRESCVFHHGNYVKDLNKLG-RDLHQVIIVDNSPASYIFHPDNAVPVASWF 159 (220)
Q Consensus 90 ~YAd~Vid~LDp~g-~f~~rL-yResC~~~~g~yvKDLs~Lg-RdL~rVIIVDnsp~s~~~qpdN~I~I~~f~ 159 (220)
.||..|+..|||.+ +|.+|+ .|+. ....-.+||..++ +.-+.||||||+...|..++.|.|.|.+|.
T Consensus 228 ~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 228 DYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred HHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 69999999999987 788664 6776 2233467777774 666779999999999999999999999884
No 10
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.19 E-value=0.0097 Score=54.01 Aligned_cols=23 Identities=26% Similarity=0.393 Sum_probs=17.7
Q ss_pred ccccccccccCcEEEEeCCCCcc
Q psy1552 123 KDLNKLGRDLHQVIIVDNSPASY 145 (220)
Q Consensus 123 KDLs~LgRdL~rVIIVDnsp~s~ 145 (220)
+=+..+|-+++.+|+|||++...
T Consensus 94 ~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 94 KIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred HHHHHhCCCcCcEEEECCCHHHH
Confidence 34456788889999999987644
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.52 E-value=0.012 Score=46.50 Aligned_cols=23 Identities=26% Similarity=0.381 Sum_probs=16.5
Q ss_pred cccccccc--cccCcEEEEeCCCCc
Q psy1552 122 VKDLNKLG--RDLHQVIIVDNSPAS 144 (220)
Q Consensus 122 vKDLs~Lg--RdL~rVIIVDnsp~s 144 (220)
.+=+.++| -+.+++|+|||++..
T Consensus 96 ~~a~~~lg~~~~p~~~l~igDs~~n 120 (128)
T TIGR01681 96 VEIALKLNGVLKPKSILFVDDRPDN 120 (128)
T ss_pred HHHHHHhcCCCCcceEEEECCCHhH
Confidence 33445567 788889999988764
No 12
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=93.66 E-value=0.045 Score=45.89 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=22.7
Q ss_pred ccccccccccccCcEEEEeCCCCccccCCCceee
Q psy1552 121 YVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVP 154 (220)
Q Consensus 121 yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~ 154 (220)
|.+-+..+|-+.+++|+|+|++.-+..-...++.
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 3445566777788999999998655443344443
No 13
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=93.30 E-value=0.05 Score=40.27 Aligned_cols=14 Identities=43% Similarity=0.681 Sum_probs=12.3
Q ss_pred eEEEecCcceeecc
Q psy1552 75 CMVIDLDETLVHSS 88 (220)
Q Consensus 75 tLVLDLDETLVhss 88 (220)
++|+|+|+||+...
T Consensus 1 ~~vfD~D~tl~~~~ 14 (139)
T cd01427 1 AVLFDLDGTLLDSE 14 (139)
T ss_pred CeEEccCCceEccC
Confidence 48999999998876
No 14
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=93.09 E-value=0.049 Score=42.48 Aligned_cols=41 Identities=22% Similarity=0.383 Sum_probs=24.0
Q ss_pred ccceEEEecCeeee---cCcccccccccccccCcEEEEeCCCCc
Q psy1552 104 VFRARLFRESCVFH---HGNYVKDLNKLGRDLHQVIIVDNSPAS 144 (220)
Q Consensus 104 ~f~~rLyResC~~~---~g~yvKDLs~LgRdL~rVIIVDnsp~s 144 (220)
+|...++.+..... ...|.+=+..+|-+.+++|+|||++..
T Consensus 119 ~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d 162 (176)
T PF13419_consen 119 YFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSD 162 (176)
T ss_dssp GCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHH
T ss_pred ccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHH
Confidence 45555554433321 123444455667788899999998743
No 15
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.44 E-value=0.1 Score=42.66 Aligned_cols=19 Identities=32% Similarity=0.478 Sum_probs=11.6
Q ss_pred ccccccccCcEEEEeCCCC
Q psy1552 125 LNKLGRDLHQVIIVDNSPA 143 (220)
Q Consensus 125 Ls~LgRdL~rVIIVDnsp~ 143 (220)
+.++|.+.+++++|+|++.
T Consensus 151 ~~~~~~~~~~~l~vgD~~~ 169 (184)
T TIGR01993 151 LREAGVDPERAIFFDDSAR 169 (184)
T ss_pred HHHhCCCccceEEEeCCHH
Confidence 4445666666666666654
No 16
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.77 E-value=0.082 Score=51.83 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=26.8
Q ss_pred cccccccccccCcEEEEeCCCCccccCCCce-eecCCCCCC
Q psy1552 122 VKDLNKLGRDLHQVIIVDNSPASYIFHPDNA-VPVASWFDD 161 (220)
Q Consensus 122 vKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~-I~I~~f~gd 161 (220)
-|=-++||-.++..|.|||+|.....-..++ |.|.+|--|
T Consensus 317 rkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D 357 (574)
T COG3882 317 RKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED 357 (574)
T ss_pred HHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence 3455677888999999999998765433333 555555443
No 17
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=90.60 E-value=0.22 Score=44.24 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=21.5
Q ss_pred ccccccccccccCcEEEEeCCCCccccCCCcee
Q psy1552 121 YVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAV 153 (220)
Q Consensus 121 yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I 153 (220)
|.+=+.++|-+.+++|+|+|++.-+..-...|+
T Consensus 171 ~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~ 203 (260)
T PLN03243 171 FMYAAERLGFIPERCIVFGNSNSSVEAAHDGCM 203 (260)
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCC
Confidence 344456677778889999998765544333343
No 18
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=89.60 E-value=0.12 Score=45.70 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=50.9
Q ss_pred CCCceEEEecCcceeecc------c----------------------------------ccHHHHHHhhcCCC-ccceEE
Q psy1552 71 MHKKCMVIDLDETLVHSS------F----------------------------------KYADPVADLLDRWG-VFRARL 109 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss------~----------------------------------~YAd~Vid~LDp~g-~f~~rL 109 (220)
..++.+++|+|+||+-.. | .++..+++.|...+ .|...+
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~ 235 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLI 235 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhh
Confidence 356899999999998421 1 45666777776665 555444
Q ss_pred EecCee-------eec---Cccccccccccc-ccCcEEEEeCCCCccccCCCceee
Q psy1552 110 FRESCV-------FHH---GNYVKDLNKLGR-DLHQVIIVDNSPASYIFHPDNAVP 154 (220)
Q Consensus 110 yResC~-------~~~---g~yvKDLs~LgR-dL~rVIIVDnsp~s~~~qpdN~I~ 154 (220)
..+.+. -.. -.+.+-|..++. +.+.+|+|||++.-...-..+||+
T Consensus 236 ~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 236 GRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred CCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 444111 001 112334555676 568999999998766554455554
No 19
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=89.47 E-value=0.22 Score=42.06 Aligned_cols=27 Identities=11% Similarity=-0.043 Sum_probs=20.1
Q ss_pred ccccCcEEEEeCCCCccccCCCceeec
Q psy1552 129 GRDLHQVIIVDNSPASYIFHPDNAVPV 155 (220)
Q Consensus 129 gRdL~rVIIVDnsp~s~~~qpdN~I~I 155 (220)
|-+.+++|+|||++.....-..+++.+
T Consensus 127 gl~p~e~l~VgDs~~di~aA~~aGi~~ 153 (174)
T TIGR01685 127 VLKPAQILFFDDRTDNVREVWGYGVTS 153 (174)
T ss_pred CCCHHHeEEEcChhHhHHHHHHhCCEE
Confidence 366789999999998776555566544
No 20
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=88.65 E-value=0.34 Score=37.55 Aligned_cols=24 Identities=13% Similarity=0.349 Sum_probs=15.8
Q ss_pred cccccccc-ccccCcEEEEeC-CCCc
Q psy1552 121 YVKDLNKL-GRDLHQVIIVDN-SPAS 144 (220)
Q Consensus 121 yvKDLs~L-gRdL~rVIIVDn-sp~s 144 (220)
|.+-++.+ +-+.+++|+|+| +..-
T Consensus 91 ~~~~~~~~~~~~~~~~v~IGD~~~~D 116 (132)
T TIGR01662 91 FLEALKRFNEIDPEESVYVGDQDLTD 116 (132)
T ss_pred HHHHHHHcCCCChhheEEEcCCCccc
Confidence 33445666 477888999988 4443
No 21
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=88.57 E-value=0.27 Score=43.93 Aligned_cols=16 Identities=38% Similarity=0.573 Sum_probs=14.4
Q ss_pred CceEEEecCcceeecc
Q psy1552 73 KKCMVIDLDETLVHSS 88 (220)
Q Consensus 73 k~tLVLDLDETLVhss 88 (220)
.+++++|||||||.|.
T Consensus 62 ~k~vIFDlDGTLiDS~ 77 (273)
T PRK13225 62 LQAIIFDFDGTLVDSL 77 (273)
T ss_pred cCEEEECCcCccccCH
Confidence 5689999999999986
No 22
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=87.98 E-value=0.53 Score=39.20 Aligned_cols=16 Identities=44% Similarity=0.625 Sum_probs=13.5
Q ss_pred CceEEEecCcceeecc
Q psy1552 73 KKCMVIDLDETLVHSS 88 (220)
Q Consensus 73 k~tLVLDLDETLVhss 88 (220)
-+.+++|+||||+.+.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 4589999999999774
No 23
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=87.93 E-value=0.26 Score=40.98 Aligned_cols=65 Identities=9% Similarity=0.030 Sum_probs=36.1
Q ss_pred ccHHHHHHhhcCCCccceEEEecCeee---ecCcccccccccccccCcEEEEeCCCCccccCCCceee
Q psy1552 90 KYADPVADLLDRWGVFRARLFRESCVF---HHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVP 154 (220)
Q Consensus 90 ~YAd~Vid~LDp~g~f~~rLyResC~~---~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~ 154 (220)
.++..+++.++-.++|...+..+.+.. ....|.+=+.++|-+.+++|+|+|++.-+..-...|+.
T Consensus 103 ~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~ 170 (205)
T TIGR01454 103 PRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTA 170 (205)
T ss_pred HHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCe
Confidence 445555555444445555555444322 11233444556777788999999988655443344444
No 24
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=87.25 E-value=0.26 Score=42.49 Aligned_cols=26 Identities=31% Similarity=0.594 Sum_probs=21.3
Q ss_pred cccccccccccccCcEEEEeCCCCcc
Q psy1552 120 NYVKDLNKLGRDLHQVIIVDNSPASY 145 (220)
Q Consensus 120 ~yvKDLs~LgRdL~rVIIVDnsp~s~ 145 (220)
.|.+=..+||-+.+++|+|+|++.-.
T Consensus 147 ~yL~Aa~~Lgv~P~~CvviEDs~~Gi 172 (221)
T COG0637 147 IYLLAAERLGVDPEECVVVEDSPAGI 172 (221)
T ss_pred HHHHHHHHcCCChHHeEEEecchhHH
Confidence 35666778899999999999998654
No 25
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=87.09 E-value=0.6 Score=44.31 Aligned_cols=26 Identities=15% Similarity=0.132 Sum_probs=19.3
Q ss_pred ccccccccccccCcEEEEeCCCCccc
Q psy1552 121 YVKDLNKLGRDLHQVIIVDNSPASYI 146 (220)
Q Consensus 121 yvKDLs~LgRdL~rVIIVDnsp~s~~ 146 (220)
|.+-+..+|-+.+++|+|+|++.-+.
T Consensus 278 fl~A~~~lgl~Peecl~IGDS~~DIe 303 (381)
T PLN02575 278 FIYAAQLLNFIPERCIVFGNSNQTVE 303 (381)
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHH
Confidence 44556677888899999999876543
No 26
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=86.30 E-value=0.44 Score=42.16 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=14.6
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
+..+++||||||+.|+-
T Consensus 63 p~aViFDlDgTLlDSs~ 79 (237)
T TIGR01672 63 PIAVSFDIDDTVLFSSP 79 (237)
T ss_pred CeEEEEeCCCccccCcH
Confidence 34999999999999864
No 27
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=85.03 E-value=1 Score=37.05 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=23.4
Q ss_pred cccccccccccccCcEEEEeCCCCccccCCCcee
Q psy1552 120 NYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAV 153 (220)
Q Consensus 120 ~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I 153 (220)
.|.+=++++|-+.+++|+|+|++.-...-..+++
T Consensus 111 ~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~ 144 (176)
T TIGR00213 111 MLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKV 144 (176)
T ss_pred HHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCC
Confidence 3455567788899999999998765433333444
No 28
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=84.74 E-value=1.2 Score=41.01 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=56.0
Q ss_pred CCceEEEecCcceeeccc-------------------------------ccHHHHHHhhcCCCccceEEEecCee-----
Q psy1552 72 HKKCMVIDLDETLVHSSF-------------------------------KYADPVADLLDRWGVFRARLFRESCV----- 115 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~-------------------------------~YAd~Vid~LDp~g~f~~rLyResC~----- 115 (220)
.+-++|+|||+|||-.+. +++..-++.+.-.++|...|.+.+-.
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~ 200 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNS 200 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCc
Confidence 345999999999997753 45666666665457777777654322
Q ss_pred -----------eecCcccccccc-----------------ccc-ccCcEEEEeCCCCccccCCCceeecCCCCCCCCchH
Q psy1552 116 -----------FHHGNYVKDLNK-----------------LGR-DLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDTE 166 (220)
Q Consensus 116 -----------~~~g~yvKDLs~-----------------LgR-dL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~e 166 (220)
+....++-|+.. .|- -.+.+-+|||-+.+- ++.||-|.|+.----.+|-+
T Consensus 201 ~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn-~~YD~FVnvkrcp~P~~DW~ 279 (297)
T PF05152_consen 201 RVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNN-YSYDYFVNVKRCPVPVNDWQ 279 (297)
T ss_pred cceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccC-ccceeEEEeccCCCCchHHH
Confidence 111222333332 221 124567888877643 36778887776665556543
No 29
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=83.81 E-value=0.41 Score=40.98 Aligned_cols=91 Identities=14% Similarity=0.183 Sum_probs=49.6
Q ss_pred cCCCCceEEEecCcceeeccccc-HHHHHHhhcC---CCccceEEEecCe--------------------eeecCccccc
Q psy1552 69 QDMHKKCMVIDLDETLVHSSFKY-ADPVADLLDR---WGVFRARLFRESC--------------------VFHHGNYVKD 124 (220)
Q Consensus 69 ~~~~k~tLVLDLDETLVhss~~Y-Ad~Vid~LDp---~g~f~~rLyResC--------------------~~~~g~yvKD 124 (220)
...+.+++++|||+|||--...+ +..+.++++. .|+ .-.+..+.. .-..-.+.|-
T Consensus 24 ~~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~gi-~v~vvSNn~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~A 102 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAGI-KVVVVSNNKESRVARAAEKLGVPFIYRAKKPFGRAFRRA 102 (175)
T ss_pred HHcCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcCC-EEEEEeCCCHHHHHhhhhhcCCceeecccCccHHHHHHH
Confidence 34688999999999999765533 3445555543 121 111110000 0001134566
Q ss_pred ccccccccCcEEEEeCCCCcccc--CC--CceeecCCCCC
Q psy1552 125 LNKLGRDLHQVIIVDNSPASYIF--HP--DNAVPVASWFD 160 (220)
Q Consensus 125 Ls~LgRdL~rVIIVDnsp~s~~~--qp--dN~I~I~~f~g 160 (220)
|..++-+.++|++|=|.-..=.+ |. --.|.|.|=..
T Consensus 103 l~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~ 142 (175)
T COG2179 103 LKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVA 142 (175)
T ss_pred HHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEecc
Confidence 77778889999999875432111 11 13566666544
No 30
>PLN02940 riboflavin kinase
Probab=83.18 E-value=0.65 Score=43.48 Aligned_cols=26 Identities=8% Similarity=0.377 Sum_probs=18.9
Q ss_pred ccccccccccccCcEEEEeCCCCccc
Q psy1552 121 YVKDLNKLGRDLHQVIIVDNSPASYI 146 (220)
Q Consensus 121 yvKDLs~LgRdL~rVIIVDnsp~s~~ 146 (220)
|.+-++.+|-+.+++|+|+|++.-..
T Consensus 156 ~~~a~~~lgv~p~~~l~VGDs~~Di~ 181 (382)
T PLN02940 156 FLEAAKRLNVEPSNCLVIEDSLPGVM 181 (382)
T ss_pred HHHHHHHcCCChhHEEEEeCCHHHHH
Confidence 34445667777889999999886553
No 31
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=83.00 E-value=0.83 Score=34.87 Aligned_cols=55 Identities=25% Similarity=0.289 Sum_probs=37.9
Q ss_pred EEEecCcceeeccc--ccHHHHHHhhcCCCccceEEEecCeeeecCcccccccccccc
Q psy1552 76 MVIDLDETLVHSSF--KYADPVADLLDRWGVFRARLFRESCVFHHGNYVKDLNKLGRD 131 (220)
Q Consensus 76 LVLDLDETLVhss~--~YAd~Vid~LDp~g~f~~rLyResC~~~~g~yvKDLs~LgRd 131 (220)
+++|+||||++... .-|...++.|...+ ...++.-+++......|.+-|..+|-+
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g-~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERG-KPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTT-SEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcC-CCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 58999999999766 55777888886665 244555555555556678888888754
No 32
>PRK11587 putative phosphatase; Provisional
Probab=82.77 E-value=0.78 Score=38.73 Aligned_cols=19 Identities=42% Similarity=0.361 Sum_probs=15.5
Q ss_pred CceEEEecCcceeeccccc
Q psy1552 73 KKCMVIDLDETLVHSSFKY 91 (220)
Q Consensus 73 k~tLVLDLDETLVhss~~Y 91 (220)
.+++++||||||+.|...+
T Consensus 3 ~k~viFDlDGTL~Ds~~~~ 21 (218)
T PRK11587 3 CKGFLFDLDGTLVDSLPAV 21 (218)
T ss_pred CCEEEEcCCCCcCcCHHHH
Confidence 3689999999999997533
No 33
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=82.51 E-value=0.84 Score=39.04 Aligned_cols=18 Identities=33% Similarity=0.532 Sum_probs=15.3
Q ss_pred ceEEEecCcceeeccccc
Q psy1552 74 KCMVIDLDETLVHSSFKY 91 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~Y 91 (220)
+++++|+||||+.|...+
T Consensus 13 k~viFD~DGTL~Ds~~~~ 30 (229)
T PRK13226 13 RAVLFDLDGTLLDSAPDM 30 (229)
T ss_pred CEEEEcCcCccccCHHHH
Confidence 589999999999997533
No 34
>KOG3109|consensus
Probab=82.27 E-value=1.4 Score=39.53 Aligned_cols=19 Identities=37% Similarity=0.569 Sum_probs=16.8
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
+..+|+.+|||+||-+.|.
T Consensus 13 ~~~~~l~FDiDdtLYp~St 31 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLST 31 (244)
T ss_pred ccceEEEEecccccccCch
Confidence 3778999999999999875
No 35
>PRK10444 UMP phosphatase; Provisional
Probab=82.22 E-value=1.2 Score=39.25 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=22.3
Q ss_pred ceEEEecCcceeeccc--ccHHHHHHhhcCCC
Q psy1552 74 KCMVIDLDETLVHSSF--KYADPVADLLDRWG 103 (220)
Q Consensus 74 ~tLVLDLDETLVhss~--~YAd~Vid~LDp~g 103 (220)
+.+++||||||++... ..|...++.|-..|
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g 33 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDKG 33 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHCC
Confidence 4789999999998865 55666666665544
No 36
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=81.94 E-value=0.89 Score=36.91 Aligned_cols=27 Identities=15% Similarity=0.281 Sum_probs=19.0
Q ss_pred CceEEEecCcceeecccccHHHHHHhh
Q psy1552 73 KKCMVIDLDETLVHSSFKYADPVADLL 99 (220)
Q Consensus 73 k~tLVLDLDETLVhss~~YAd~Vid~L 99 (220)
.+.+++|+|||||.|...+...+...+
T Consensus 5 ~~~viFD~DGTLiDs~~~~~~a~~~~~ 31 (188)
T PRK10725 5 YAGLIFDMDGTILDTEPTHRKAWREVL 31 (188)
T ss_pred ceEEEEcCCCcCccCHHHHHHHHHHHH
Confidence 468999999999998654444443333
No 37
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=81.12 E-value=1.3 Score=36.94 Aligned_cols=19 Identities=21% Similarity=0.141 Sum_probs=15.5
Q ss_pred ceEEEecCcceeecccccH
Q psy1552 74 KCMVIDLDETLVHSSFKYA 92 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~YA 92 (220)
+++++|+||||+.+...|.
T Consensus 2 k~iiFD~DGTL~ds~~~~~ 20 (220)
T TIGR03351 2 SLVVLDMAGTTVDEDGLVY 20 (220)
T ss_pred cEEEEecCCCeeccCchHH
Confidence 5899999999999876333
No 38
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=80.36 E-value=1.4 Score=36.47 Aligned_cols=25 Identities=24% Similarity=0.502 Sum_probs=17.8
Q ss_pred eEEEecCcceeecccccHHHHHHhh
Q psy1552 75 CMVIDLDETLVHSSFKYADPVADLL 99 (220)
Q Consensus 75 tLVLDLDETLVhss~~YAd~Vid~L 99 (220)
.+++|||||||-|.-.+...+.+.+
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~ 26 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTV 26 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHH
Confidence 5899999999999764444444433
No 39
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=80.01 E-value=0.98 Score=40.77 Aligned_cols=18 Identities=44% Similarity=0.639 Sum_probs=15.5
Q ss_pred CCCceEEEecCcceeecc
Q psy1552 71 MHKKCMVIDLDETLVHSS 88 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss 88 (220)
..++.+|+|||||++..+
T Consensus 73 ~kp~AVV~DIDeTvLdns 90 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNS 90 (266)
T ss_pred CCCCEEEEeCccccccCh
Confidence 357899999999999776
No 40
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=79.71 E-value=1 Score=37.10 Aligned_cols=14 Identities=43% Similarity=0.487 Sum_probs=12.4
Q ss_pred EEEecCcceeeccc
Q psy1552 76 MVIDLDETLVHSSF 89 (220)
Q Consensus 76 LVLDLDETLVhss~ 89 (220)
|++||||||+++..
T Consensus 1 i~~DlDGTLl~~~~ 14 (254)
T PF08282_consen 1 IFSDLDGTLLNSDG 14 (254)
T ss_dssp EEEECCTTTCSTTS
T ss_pred cEEEECCceecCCC
Confidence 68999999999765
No 41
>PTZ00174 phosphomannomutase; Provisional
Probab=79.20 E-value=1.5 Score=38.03 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=15.3
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
..+.+++||||||+++.-
T Consensus 4 ~~klia~DlDGTLL~~~~ 21 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN 21 (247)
T ss_pred CCeEEEEECcCCCcCCCC
Confidence 467899999999998864
No 42
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=78.62 E-value=1.3 Score=38.84 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=15.5
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
.+++.+|+|+|||++..+.
T Consensus 70 ~~~~avv~DIDeTvLsn~~ 88 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSP 88 (229)
T ss_dssp TSEEEEEEESBTTTEEHHH
T ss_pred CCCcEEEEECCcccccCHH
Confidence 4688999999999985543
No 43
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=78.35 E-value=1.3 Score=37.41 Aligned_cols=51 Identities=14% Similarity=0.277 Sum_probs=26.1
Q ss_pred ccHHHHHHhhcCC----------CccceE-EEecCeeeecCccccccc-ccccccCcEEEEeCCCCc
Q psy1552 90 KYADPVADLLDRW----------GVFRAR-LFRESCVFHHGNYVKDLN-KLGRDLHQVIIVDNSPAS 144 (220)
Q Consensus 90 ~YAd~Vid~LDp~----------g~f~~r-LyResC~~~~g~yvKDLs-~LgRdL~rVIIVDnsp~s 144 (220)
+.|..+++.|.-. .+|.+. +|.. + .-.+.+.|. ..|-+.+.+|.+||...+
T Consensus 74 ~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g-s---K~~Hf~~i~~~tgI~y~eMlFFDDe~~N 136 (169)
T PF12689_consen 74 DWARELLKLLEIDDADGDGVPLIEYFDYLEIYPG-S---KTTHFRRIHRKTGIPYEEMLFFDDESRN 136 (169)
T ss_dssp HHHHHHHHHTT-C----------CCECEEEESSS-----HHHHHHHHHHHH---GGGEEEEES-HHH
T ss_pred HHHHHHHHhcCCCccccccccchhhcchhheecC-c---hHHHHHHHHHhcCCChhHEEEecCchhc
Confidence 5788888887654 344431 2221 1 112334443 457788999999996543
No 44
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=77.71 E-value=2 Score=35.46 Aligned_cols=20 Identities=20% Similarity=0.137 Sum_probs=15.4
Q ss_pred ceEEEecCcceeecccccHH
Q psy1552 74 KCMVIDLDETLVHSSFKYAD 93 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~YAd 93 (220)
+.|++|||||||-+...+..
T Consensus 1 k~viFDlDGTL~d~~~~~~~ 20 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGE 20 (203)
T ss_pred CeEEEecCCceeeeCCCHHH
Confidence 46899999999998653333
No 45
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=77.23 E-value=1.3 Score=36.85 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=17.4
Q ss_pred ccccccccccCcEEEEeCCCCccc
Q psy1552 123 KDLNKLGRDLHQVIIVDNSPASYI 146 (220)
Q Consensus 123 KDLs~LgRdL~rVIIVDnsp~s~~ 146 (220)
+=+..+|-+.+.+++|-|+..-..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~ 126 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWP 126 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHH
Confidence 334667888889999988775443
No 46
>PHA02597 30.2 hypothetical protein; Provisional
Probab=77.13 E-value=1.4 Score=36.26 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=13.7
Q ss_pred CceEEEecCcceeecc
Q psy1552 73 KKCMVIDLDETLVHSS 88 (220)
Q Consensus 73 k~tLVLDLDETLVhss 88 (220)
.+++++||||||+.+.
T Consensus 2 ~k~viFDlDGTLiD~~ 17 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ 17 (197)
T ss_pred CcEEEEecCCceEchh
Confidence 3689999999999854
No 47
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=76.88 E-value=1.6 Score=38.63 Aligned_cols=17 Identities=41% Similarity=0.493 Sum_probs=14.8
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
.+.+++||||||+.+..
T Consensus 13 ~k~viFDlDGTL~Ds~~ 29 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVP 29 (272)
T ss_pred CCEEEEcCCCccccCHH
Confidence 35999999999999965
No 48
>PRK11590 hypothetical protein; Provisional
Probab=76.31 E-value=1.6 Score=36.93 Aligned_cols=18 Identities=28% Similarity=0.486 Sum_probs=14.9
Q ss_pred CCCceEEEecCcceeecc
Q psy1552 71 MHKKCMVIDLDETLVHSS 88 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss 88 (220)
..++.+++||||||++..
T Consensus 4 ~~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 4 HERRVVFFDLDGTLHQQD 21 (211)
T ss_pred ccceEEEEecCCCCcccc
Confidence 367799999999999654
No 49
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=75.06 E-value=1.6 Score=36.30 Aligned_cols=16 Identities=44% Similarity=0.665 Sum_probs=14.2
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+++++||||||+.+..
T Consensus 3 ~~viFDlDGTL~ds~~ 18 (221)
T TIGR02253 3 KAIFFDLDDTLIDTSG 18 (221)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 5899999999999875
No 50
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=75.02 E-value=1.7 Score=34.11 Aligned_cols=25 Identities=36% Similarity=0.570 Sum_probs=17.8
Q ss_pred eEEEecCcceeecccccHHHHHHhh
Q psy1552 75 CMVIDLDETLVHSSFKYADPVADLL 99 (220)
Q Consensus 75 tLVLDLDETLVhss~~YAd~Vid~L 99 (220)
++++|+||||+.+...|...+.+.+
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~ 25 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETL 25 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHH
Confidence 4899999999999764444444443
No 51
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=74.95 E-value=2.4 Score=37.11 Aligned_cols=19 Identities=32% Similarity=0.322 Sum_probs=15.7
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
+.++.+++||||||+++..
T Consensus 5 ~~~~lI~~DlDGTLL~~~~ 23 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT 23 (271)
T ss_pred CCCeEEEEeCccCCcCCCC
Confidence 4678999999999998643
No 52
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=74.85 E-value=3.5 Score=34.03 Aligned_cols=14 Identities=43% Similarity=0.610 Sum_probs=12.5
Q ss_pred ceEEEecCcceeec
Q psy1552 74 KCMVIDLDETLVHS 87 (220)
Q Consensus 74 ~tLVLDLDETLVhs 87 (220)
+.+.||.|+||++.
T Consensus 2 ~~~~~d~dg~l~~~ 15 (161)
T TIGR01261 2 KILFIDRDGTLIEE 15 (161)
T ss_pred CEEEEeCCCCcccc
Confidence 67999999999994
No 53
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=74.81 E-value=1.9 Score=37.36 Aligned_cols=20 Identities=25% Similarity=0.230 Sum_probs=16.0
Q ss_pred CceEEEecCcceeecccccH
Q psy1552 73 KKCMVIDLDETLVHSSFKYA 92 (220)
Q Consensus 73 k~tLVLDLDETLVhss~~YA 92 (220)
-+.+++||||||+-|...+.
T Consensus 22 ~k~viFDlDGTLiDs~~~~~ 41 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDPLHY 41 (248)
T ss_pred cCEEEEcCCCccCcCHHHHH
Confidence 35899999999999976333
No 54
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=74.23 E-value=3.9 Score=37.86 Aligned_cols=19 Identities=32% Similarity=0.394 Sum_probs=15.6
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
..++.+|+|||+||+-...
T Consensus 126 ~~~~~i~~D~D~TL~~~~~ 144 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEE 144 (303)
T ss_pred eeccEEEEecCCCccCCCC
Confidence 3567999999999998753
No 55
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=74.10 E-value=2.1 Score=34.37 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=17.0
Q ss_pred ceEEEecCcceeecccccHHHHH
Q psy1552 74 KCMVIDLDETLVHSSFKYADPVA 96 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~YAd~Vi 96 (220)
+++++|+||||+-+...+...+.
T Consensus 2 ~~iiFD~DGTL~ds~~~~~~~~~ 24 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAPLHAQAWK 24 (185)
T ss_pred CeEEEcCCCcccCChHHHHHHHH
Confidence 57999999999999764433333
No 56
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=73.79 E-value=2.6 Score=37.75 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=20.5
Q ss_pred CceEEEecCcceeecc-cccHHHHHHhhc
Q psy1552 73 KKCMVIDLDETLVHSS-FKYADPVADLLD 100 (220)
Q Consensus 73 k~tLVLDLDETLVhss-~~YAd~Vid~LD 100 (220)
-+++++|||||||-|. ..+...+-..+.
T Consensus 40 ~k~VIFDlDGTLvDS~~~~~~~a~~~~l~ 68 (286)
T PLN02779 40 PEALLFDCDGVLVETERDGHRVAFNDAFK 68 (286)
T ss_pred CcEEEEeCceeEEccccHHHHHHHHHHHH
Confidence 3589999999999998 655555444443
No 57
>PRK08238 hypothetical protein; Validated
Probab=73.68 E-value=2.1 Score=41.70 Aligned_cols=19 Identities=32% Similarity=0.538 Sum_probs=15.8
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
.....||+|||+||+++..
T Consensus 8 ~~~~pl~~DlDgTLi~td~ 26 (479)
T PRK08238 8 SRDLPLVVDLDGTLIRTDL 26 (479)
T ss_pred CCCCCEEEeCCCCccccch
Confidence 3456899999999999974
No 58
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=73.65 E-value=2.3 Score=35.83 Aligned_cols=18 Identities=22% Similarity=0.318 Sum_probs=15.4
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
..+.+++|+||||+.+..
T Consensus 6 ~~k~iiFD~DGTL~d~~~ 23 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEP 23 (222)
T ss_pred cCcEEEEcCCCCCCcCHH
Confidence 357899999999999864
No 59
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=73.21 E-value=2.9 Score=36.65 Aligned_cols=31 Identities=29% Similarity=0.284 Sum_probs=19.9
Q ss_pred CCceEEEecCcceeeccc---ccHHHHHHhhcCC
Q psy1552 72 HKKCMVIDLDETLVHSSF---KYADPVADLLDRW 102 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~---~YAd~Vid~LDp~ 102 (220)
-.+.+++||||||+.+.. ..+..+++.+-..
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~ 36 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK 36 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC
Confidence 357899999999997433 3344444444333
No 60
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=72.82 E-value=4.7 Score=37.33 Aligned_cols=19 Identities=32% Similarity=0.398 Sum_probs=15.4
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
..++.+|+|||+||+-.+.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~ 142 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE 142 (301)
T ss_pred ccceEEEEecCCCCcCCCC
Confidence 3567999999999987653
No 61
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=72.59 E-value=2.4 Score=37.56 Aligned_cols=17 Identities=29% Similarity=0.432 Sum_probs=14.4
Q ss_pred CCceEEEecCcceeecc
Q psy1552 72 HKKCMVIDLDETLVHSS 88 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss 88 (220)
+++.+|+|+|||++.++
T Consensus 62 ~p~av~~DIDeTvldns 78 (237)
T PRK11009 62 PPMAVGFDIDDTVLFSS 78 (237)
T ss_pred CCcEEEEECcCccccCC
Confidence 34599999999999865
No 62
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=71.29 E-value=2.4 Score=34.07 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=16.1
Q ss_pred eEEEecCcceeecccccHHHHH
Q psy1552 75 CMVIDLDETLVHSSFKYADPVA 96 (220)
Q Consensus 75 tLVLDLDETLVhss~~YAd~Vi 96 (220)
.+++|+||||+.+...++..+.
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~ 22 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWK 22 (185)
T ss_pred CeEEcCCCccccChHHHHHHHH
Confidence 4799999999998764443333
No 63
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=71.20 E-value=3.2 Score=34.37 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=14.0
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+.+++|+||||+.+..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 5799999999999865
No 64
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=71.04 E-value=3.9 Score=36.19 Aligned_cols=30 Identities=27% Similarity=0.215 Sum_probs=21.5
Q ss_pred ceEEEecCcceeecccc--cHHHHHHhhcCCC
Q psy1552 74 KCMVIDLDETLVHSSFK--YADPVADLLDRWG 103 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~--YAd~Vid~LDp~g 103 (220)
+++++|+||||+..... =|..+++.|...|
T Consensus 3 ~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g 34 (279)
T TIGR01452 3 QGFIFDCDGVLWLGERVVPGAPELLDRLARAG 34 (279)
T ss_pred cEEEEeCCCceEcCCeeCcCHHHHHHHHHHCC
Confidence 47899999999987652 2566676665544
No 65
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=70.99 E-value=3 Score=35.77 Aligned_cols=18 Identities=22% Similarity=0.427 Sum_probs=15.0
Q ss_pred CCCceEEEecCcceeecc
Q psy1552 71 MHKKCMVIDLDETLVHSS 88 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss 88 (220)
+.-+++++||||||+.+.
T Consensus 8 ~~~k~vIFDlDGTL~d~~ 25 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLA 25 (224)
T ss_pred ccCCEEEEcCCCCccchh
Confidence 345789999999999964
No 66
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=70.36 E-value=4.8 Score=32.99 Aligned_cols=25 Identities=20% Similarity=0.186 Sum_probs=19.7
Q ss_pred ccccccccccccCcEEEEeCCCCcc
Q psy1552 121 YVKDLNKLGRDLHQVIIVDNSPASY 145 (220)
Q Consensus 121 yvKDLs~LgRdL~rVIIVDnsp~s~ 145 (220)
|.+-+..+|-+.+++++|+|++.-+
T Consensus 109 ~~~~~~~l~~~~~~~~~VgDs~~Di 133 (181)
T PRK08942 109 LLSIAERLNIDLAGSPMVGDSLRDL 133 (181)
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHH
Confidence 4556667888899999999988644
No 67
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=70.33 E-value=3 Score=36.06 Aligned_cols=17 Identities=35% Similarity=0.487 Sum_probs=14.1
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
.+.+++||||||+.+..
T Consensus 3 ~kli~~DlDGTLl~~~~ 19 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH 19 (270)
T ss_pred eEEEEEecCCcCcCCCC
Confidence 46899999999998753
No 68
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=69.80 E-value=3.1 Score=34.86 Aligned_cols=16 Identities=31% Similarity=0.517 Sum_probs=13.3
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+.+++||||||+.+..
T Consensus 4 kli~~DlDGTLl~~~~ 19 (230)
T PRK01158 4 KAIAIDIDGTITDKDR 19 (230)
T ss_pred eEEEEecCCCcCCCCC
Confidence 6899999999996543
No 69
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=69.62 E-value=3.6 Score=35.32 Aligned_cols=16 Identities=31% Similarity=0.565 Sum_probs=13.6
Q ss_pred CceEEEecCcceeecc
Q psy1552 73 KKCMVIDLDETLVHSS 88 (220)
Q Consensus 73 k~tLVLDLDETLVhss 88 (220)
.+.+++||||||+.+.
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (272)
T PRK10530 3 YRVIALDLDGTLLTPK 18 (272)
T ss_pred ccEEEEeCCCceECCC
Confidence 4689999999999764
No 70
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=69.31 E-value=3.7 Score=34.99 Aligned_cols=18 Identities=44% Similarity=0.517 Sum_probs=15.6
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
..+++++||||||+-|..
T Consensus 3 ~~~~iiFDlDGTL~Ds~~ 20 (220)
T COG0546 3 MIKAILFDLDGTLVDSAE 20 (220)
T ss_pred CCCEEEEeCCCccccChH
Confidence 356999999999999876
No 71
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=69.26 E-value=4.5 Score=36.81 Aligned_cols=27 Identities=22% Similarity=0.238 Sum_probs=19.8
Q ss_pred eEEEecCcceeeccc--ccHHHHHHhhcC
Q psy1552 75 CMVIDLDETLVHSSF--KYADPVADLLDR 101 (220)
Q Consensus 75 tLVLDLDETLVhss~--~YAd~Vid~LDp 101 (220)
.+++|+||||+++.. .-|...++.|-.
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~ 30 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNR 30 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhc
Confidence 689999999999876 445555665543
No 72
>PRK10976 putative hydrolase; Provisional
Probab=69.25 E-value=3.7 Score=35.46 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=13.5
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+.+++||||||+.+.-
T Consensus 3 kli~~DlDGTLl~~~~ 18 (266)
T PRK10976 3 QVVASDLDGTLLSPDH 18 (266)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 5899999999997643
No 73
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=69.20 E-value=2.3 Score=35.06 Aligned_cols=14 Identities=50% Similarity=0.638 Sum_probs=12.2
Q ss_pred EEEecCcceeeccc
Q psy1552 76 MVIDLDETLVHSSF 89 (220)
Q Consensus 76 LVLDLDETLVhss~ 89 (220)
+++|+||||+-|..
T Consensus 1 viFD~DGTL~Ds~~ 14 (213)
T TIGR01449 1 VLFDLDGTLVDSAP 14 (213)
T ss_pred CeecCCCccccCHH
Confidence 58999999998765
No 74
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=69.09 E-value=2.4 Score=34.95 Aligned_cols=73 Identities=18% Similarity=0.095 Sum_probs=39.0
Q ss_pred CCCceEEEecCcceeeccc----ccHHHHHHhhcCCCccceEEEe--------------------cCeeeecCccccccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF----KYADPVADLLDRWGVFRARLFR--------------------ESCVFHHGNYVKDLN 126 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~----~YAd~Vid~LDp~g~f~~rLyR--------------------esC~~~~g~yvKDLs 126 (220)
.+-..+|+|+|+||..... ..+..+++.|-..++--..+.. ....-....|.+=+.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~~~~KP~p~~~~~~l~ 102 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLPHAVKPPGCAFRRAHP 102 (170)
T ss_pred CCCCEEEEecCCccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEcCCCCCChHHHHHHHH
Confidence 4668999999999996433 3334444444222210001100 001111112233455
Q ss_pred ccccccCcEEEEeCCCC
Q psy1552 127 KLGRDLHQVIIVDNSPA 143 (220)
Q Consensus 127 ~LgRdL~rVIIVDnsp~ 143 (220)
.+|-+.+++++|+|+..
T Consensus 103 ~~~~~~~~~l~IGDs~~ 119 (170)
T TIGR01668 103 EMGLTSEQVAVVGDRLF 119 (170)
T ss_pred HcCCCHHHEEEECCcch
Confidence 66778899999999973
No 75
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=67.59 E-value=3.3 Score=34.43 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=13.8
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+++++||||||+.+..
T Consensus 3 k~viFDldGtL~d~~~ 18 (211)
T TIGR02247 3 KAVIFDFGGVLLPSPG 18 (211)
T ss_pred eEEEEecCCceecCHH
Confidence 4899999999998853
No 76
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=67.51 E-value=4.1 Score=35.15 Aligned_cols=29 Identities=28% Similarity=0.392 Sum_probs=18.1
Q ss_pred eEEEecCcceeeccc--ccHHHHHHhhcCCC
Q psy1552 75 CMVIDLDETLVHSSF--KYADPVADLLDRWG 103 (220)
Q Consensus 75 tLVLDLDETLVhss~--~YAd~Vid~LDp~g 103 (220)
.+++||||||++... ..+..+++.+-..|
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G 31 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDLG 31 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHCC
Confidence 378999999999544 22444444443334
No 77
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=67.22 E-value=4 Score=34.24 Aligned_cols=15 Identities=40% Similarity=0.600 Sum_probs=12.6
Q ss_pred ceEEEecCcceeecc
Q psy1552 74 KCMVIDLDETLVHSS 88 (220)
Q Consensus 74 ~tLVLDLDETLVhss 88 (220)
+.+++||||||+...
T Consensus 2 k~v~~DlDGTLl~~~ 16 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN 16 (215)
T ss_pred cEEEEecCCCcCCCC
Confidence 478999999999654
No 78
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=66.96 E-value=2.7 Score=34.60 Aligned_cols=16 Identities=31% Similarity=0.351 Sum_probs=13.7
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+.+++|+||||+.+..
T Consensus 2 k~viFD~dgTLiD~~~ 17 (198)
T TIGR01428 2 KALVFDVYGTLFDVHS 17 (198)
T ss_pred cEEEEeCCCcCccHHH
Confidence 4799999999998763
No 79
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=66.23 E-value=4.8 Score=37.29 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=22.2
Q ss_pred ceEEEecCcceeeccc---ccHHHHHHhhcCCC
Q psy1552 74 KCMVIDLDETLVHSSF---KYADPVADLLDRWG 103 (220)
Q Consensus 74 ~tLVLDLDETLVhss~---~YAd~Vid~LDp~g 103 (220)
+.+++||||||+.+.. .-|.+.++.|-..+
T Consensus 2 KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~G 34 (302)
T PRK12702 2 RLVLSSLDGSLLDLEFNSYGAARQALAALERRS 34 (302)
T ss_pred cEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCC
Confidence 5789999999997433 44667777776555
No 80
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=66.22 E-value=5.9 Score=34.81 Aligned_cols=30 Identities=17% Similarity=0.120 Sum_probs=20.7
Q ss_pred ceEEEecCcceeeccc------ccHHHHHHhhcCCC
Q psy1552 74 KCMVIDLDETLVHSSF------KYADPVADLLDRWG 103 (220)
Q Consensus 74 ~tLVLDLDETLVhss~------~YAd~Vid~LDp~g 103 (220)
+++++||||||++... .-|...++.|-..|
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G 37 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGAS 37 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCC
Confidence 5899999999998632 34555566664444
No 81
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=66.20 E-value=3.1 Score=34.67 Aligned_cols=14 Identities=29% Similarity=0.411 Sum_probs=11.7
Q ss_pred EEEecCcceeeccc
Q psy1552 76 MVIDLDETLVHSSF 89 (220)
Q Consensus 76 LVLDLDETLVhss~ 89 (220)
+++||||||+.+..
T Consensus 1 i~~DlDGTLl~~~~ 14 (225)
T TIGR01482 1 IASDIDGTLTDPNR 14 (225)
T ss_pred CeEeccCccCCCCc
Confidence 58999999998754
No 82
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=66.01 E-value=4 Score=39.02 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=34.8
Q ss_pred CeeeecCcccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCCCCch
Q psy1552 113 SCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDT 165 (220)
Q Consensus 113 sC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~ 165 (220)
.+++..+.-+.|+..+.+.+.+....|+.+..+...+.+......|.+++-..
T Consensus 173 ~~~~~~~~~i~d~~~~~~~~~r~~~~~~l~~~~~~~~~~~k~L~l~lde~l~~ 225 (390)
T COG5190 173 FSKYESDKDIVDLPRLERKLSREAGIDTLEPPVSKSTSPKKTLVLDLDETLVH 225 (390)
T ss_pred cccccccccccCcccccchhhhhcccccccchhhcCCCCccccccCCCcccee
Confidence 33444445567777777888888888888777776666666555666654433
No 83
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=65.39 E-value=3.5 Score=35.99 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=14.0
Q ss_pred CceEEEecCcceeecc
Q psy1552 73 KKCMVIDLDETLVHSS 88 (220)
Q Consensus 73 k~tLVLDLDETLVhss 88 (220)
-+++++|+|||||.+.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3689999999999984
No 84
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=65.27 E-value=4.2 Score=33.56 Aligned_cols=13 Identities=38% Similarity=0.680 Sum_probs=11.5
Q ss_pred EEEecCcceeecc
Q psy1552 76 MVIDLDETLVHSS 88 (220)
Q Consensus 76 LVLDLDETLVhss 88 (220)
+++|+||||+...
T Consensus 2 i~~D~DgTL~~~~ 14 (204)
T TIGR01484 2 LFFDLDGTLLDPN 14 (204)
T ss_pred EEEeCcCCCcCCC
Confidence 7899999999765
No 85
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=64.96 E-value=3.6 Score=33.13 Aligned_cols=15 Identities=40% Similarity=0.647 Sum_probs=12.7
Q ss_pred ceEEEecCcceeecc
Q psy1552 74 KCMVIDLDETLVHSS 88 (220)
Q Consensus 74 ~tLVLDLDETLVhss 88 (220)
+.+|+||||||....
T Consensus 2 K~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 2 KRLVMDLDNTITLTE 16 (126)
T ss_pred CEEEEeCCCCcccCC
Confidence 589999999998753
No 86
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=64.81 E-value=3.1 Score=33.11 Aligned_cols=16 Identities=38% Similarity=0.557 Sum_probs=13.4
Q ss_pred eEEEecCcceeecccc
Q psy1552 75 CMVIDLDETLVHSSFK 90 (220)
Q Consensus 75 tLVLDLDETLVhss~~ 90 (220)
.+++|||||||.+...
T Consensus 1 ~vlFDlDgtLv~~~~~ 16 (183)
T TIGR01509 1 AILFDLDGVLVDTSSA 16 (183)
T ss_pred CeeeccCCceechHHH
Confidence 3799999999999653
No 87
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=64.42 E-value=3.8 Score=33.29 Aligned_cols=16 Identities=38% Similarity=0.486 Sum_probs=13.5
Q ss_pred CceEEEecCcceeecc
Q psy1552 73 KKCMVIDLDETLVHSS 88 (220)
Q Consensus 73 k~tLVLDLDETLVhss 88 (220)
.+++|+|+|||||-+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 4589999999999753
No 88
>PRK09449 dUMP phosphatase; Provisional
Probab=63.44 E-value=3.4 Score=34.55 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=12.8
Q ss_pred ceEEEecCcceeecc
Q psy1552 74 KCMVIDLDETLVHSS 88 (220)
Q Consensus 74 ~tLVLDLDETLVhss 88 (220)
+++++||||||+...
T Consensus 4 k~iiFDlDGTLid~~ 18 (224)
T PRK09449 4 DWILFDADETLFHFD 18 (224)
T ss_pred cEEEEcCCCchhcch
Confidence 589999999999643
No 89
>PLN02645 phosphoglycolate phosphatase
Probab=63.30 E-value=7.1 Score=35.31 Aligned_cols=28 Identities=14% Similarity=0.196 Sum_probs=19.0
Q ss_pred CceEEEecCcceeeccc--ccHHHHHHhhc
Q psy1552 73 KKCMVIDLDETLVHSSF--KYADPVADLLD 100 (220)
Q Consensus 73 k~tLVLDLDETLVhss~--~YAd~Vid~LD 100 (220)
-+++++|+||||++... .=|...++.|-
T Consensus 28 ~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr 57 (311)
T PLN02645 28 VETFIFDCDGVIWKGDKLIEGVPETLDMLR 57 (311)
T ss_pred CCEEEEeCcCCeEeCCccCcCHHHHHHHHH
Confidence 46899999999998764 22444444443
No 90
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=63.29 E-value=4.8 Score=34.76 Aligned_cols=17 Identities=41% Similarity=0.483 Sum_probs=14.8
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
.+.+++||||||+.+..
T Consensus 3 ~kli~~DlDGTLl~~~~ 19 (264)
T COG0561 3 IKLLAFDLDGTLLDSNK 19 (264)
T ss_pred eeEEEEcCCCCccCCCC
Confidence 56899999999998865
No 91
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=63.10 E-value=4.1 Score=36.15 Aligned_cols=19 Identities=21% Similarity=0.275 Sum_probs=16.7
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
.++..+|||+|||++....
T Consensus 75 dg~~A~V~DIDET~LsN~p 93 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIP 93 (229)
T ss_pred CCCcEEEEccccccccCHH
Confidence 4899999999999998764
No 92
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=63.09 E-value=3.5 Score=35.45 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=14.4
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
-+.+++||||||+-+..
T Consensus 10 ~k~iiFDlDGTL~D~~~ 26 (238)
T PRK10748 10 ISALTFDLDDTLYDNRP 26 (238)
T ss_pred ceeEEEcCcccccCChH
Confidence 36899999999998854
No 93
>PRK06769 hypothetical protein; Validated
Probab=62.78 E-value=7.5 Score=32.04 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=20.1
Q ss_pred cccccccccccccCcEEEEeCCCCccc
Q psy1552 120 NYVKDLNKLGRDLHQVIIVDNSPASYI 146 (220)
Q Consensus 120 ~yvKDLs~LgRdL~rVIIVDnsp~s~~ 146 (220)
.|.+-+.++|-+.+++|+|+|++.-..
T Consensus 98 ~~~~~~~~l~~~p~~~i~IGD~~~Di~ 124 (173)
T PRK06769 98 MLLQAAEKHGLDLTQCAVIGDRWTDIV 124 (173)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHH
Confidence 344556677888999999999876443
No 94
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=62.71 E-value=5.2 Score=34.80 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=13.0
Q ss_pred ceEEEecCcceeecc
Q psy1552 74 KCMVIDLDETLVHSS 88 (220)
Q Consensus 74 ~tLVLDLDETLVhss 88 (220)
+.+++||||||+.+.
T Consensus 3 kli~~DlDGTLl~~~ 17 (272)
T PRK15126 3 RLAAFDMDGTLLMPD 17 (272)
T ss_pred cEEEEeCCCcCcCCC
Confidence 589999999999764
No 95
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.65 E-value=4.9 Score=32.20 Aligned_cols=21 Identities=33% Similarity=0.216 Sum_probs=15.2
Q ss_pred EEEecCcceeecccccHHHHH
Q psy1552 76 MVIDLDETLVHSSFKYADPVA 96 (220)
Q Consensus 76 LVLDLDETLVhss~~YAd~Vi 96 (220)
|++|||||||-+...+...+-
T Consensus 2 viFD~DGTL~D~~~~~~~~~~ 22 (175)
T TIGR01493 2 MVFDVYGTLVDVHGGVRACLA 22 (175)
T ss_pred eEEecCCcCcccHHHHHHHHH
Confidence 789999999988654444333
No 96
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=62.54 E-value=4.9 Score=33.59 Aligned_cols=17 Identities=35% Similarity=0.436 Sum_probs=14.3
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
.+.+++|+||||+-+..
T Consensus 4 ~~~viFD~DGTL~d~~~ 20 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEV 20 (221)
T ss_pred CCEEEECCCCCCCCChH
Confidence 46899999999998754
No 97
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=62.35 E-value=4.7 Score=34.69 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=13.4
Q ss_pred ceEEEecCcceeecc
Q psy1552 74 KCMVIDLDETLVHSS 88 (220)
Q Consensus 74 ~tLVLDLDETLVhss 88 (220)
+++++|+|||||-+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 589999999999984
No 98
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=61.68 E-value=4.3 Score=33.40 Aligned_cols=16 Identities=25% Similarity=0.488 Sum_probs=13.1
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+.+|+|+||||+...|
T Consensus 2 ~~v~FD~DGTL~~~~~ 17 (205)
T PRK13582 2 EIVCLDLEGVLVPEIW 17 (205)
T ss_pred eEEEEeCCCCChhhHH
Confidence 4789999999996544
No 99
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=60.82 E-value=5 Score=33.45 Aligned_cols=19 Identities=37% Similarity=0.550 Sum_probs=15.8
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
..++.+++|+||||+.+..
T Consensus 12 ~~~k~iiFD~DGTL~~~~~ 30 (219)
T TIGR00338 12 RSKKLVVFDMDSTLINAET 30 (219)
T ss_pred ccCCEEEEeCcccCCCchH
Confidence 3567999999999999753
No 100
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=60.66 E-value=5.2 Score=38.09 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=16.2
Q ss_pred ceEEEecCcceeecccccHH
Q psy1552 74 KCMVIDLDETLVHSSFKYAD 93 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~YAd 93 (220)
..+++|||||||.|...|.+
T Consensus 242 k~vIFDlDGTLiDs~~~~~~ 261 (459)
T PRK06698 242 QALIFDMDGTLFQTDKILEL 261 (459)
T ss_pred hheeEccCCceecchhHHHH
Confidence 68999999999999764433
No 101
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=60.34 E-value=4.4 Score=33.95 Aligned_cols=13 Identities=46% Similarity=0.595 Sum_probs=11.5
Q ss_pred EEEecCcceeecc
Q psy1552 76 MVIDLDETLVHSS 88 (220)
Q Consensus 76 LVLDLDETLVhss 88 (220)
+++||||||+.+.
T Consensus 2 i~~DlDGTLL~~~ 14 (221)
T TIGR02463 2 VFSDLDGTLLDSH 14 (221)
T ss_pred EEEeCCCCCcCCC
Confidence 7999999999864
No 102
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=59.95 E-value=5.7 Score=34.13 Aligned_cols=14 Identities=43% Similarity=0.705 Sum_probs=12.0
Q ss_pred EEEecCcceeeccc
Q psy1552 76 MVIDLDETLVHSSF 89 (220)
Q Consensus 76 LVLDLDETLVhss~ 89 (220)
+++||||||+....
T Consensus 2 i~~DlDGTLl~~~~ 15 (256)
T TIGR00099 2 IFIDLDGTLLNDDH 15 (256)
T ss_pred EEEeCCCCCCCCCC
Confidence 78999999998753
No 103
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=59.86 E-value=7.2 Score=33.01 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=20.9
Q ss_pred cCCCCceEEEecCcceeeccc-ccHHHHHHhh
Q psy1552 69 QDMHKKCMVIDLDETLVHSSF-KYADPVADLL 99 (220)
Q Consensus 69 ~~~~k~tLVLDLDETLVhss~-~YAd~Vid~L 99 (220)
...+-+.||+|+|+||+.-.. +....+.+++
T Consensus 37 k~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~ 68 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYEDEIPPEYAEWL 68 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCcCcCCHHHHHHH
Confidence 346789999999999985433 3344444444
No 104
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=59.64 E-value=8.9 Score=33.48 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=20.5
Q ss_pred ceEEEecCcceeeccc--ccHHHHHHhhcCCC
Q psy1552 74 KCMVIDLDETLVHSSF--KYADPVADLLDRWG 103 (220)
Q Consensus 74 ~tLVLDLDETLVhss~--~YAd~Vid~LDp~g 103 (220)
..+++|+||||+.... .-|...++.|-..|
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g 33 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKRD 33 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHCC
Confidence 4789999999998765 33555555554444
No 105
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=57.72 E-value=8.3 Score=33.23 Aligned_cols=14 Identities=50% Similarity=0.669 Sum_probs=12.1
Q ss_pred CceEEEecCcceee
Q psy1552 73 KKCMVIDLDETLVH 86 (220)
Q Consensus 73 k~tLVLDLDETLVh 86 (220)
|..|+.||||||+.
T Consensus 1 ~~li~tDlDGTLl~ 14 (249)
T TIGR01485 1 RLLLVSDLDNTLVD 14 (249)
T ss_pred CeEEEEcCCCcCcC
Confidence 45789999999995
No 106
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=57.18 E-value=5.5 Score=36.27 Aligned_cols=91 Identities=19% Similarity=0.202 Sum_probs=48.3
Q ss_pred CCCceEEEecCcceeeccc----------cc-------------------HHHHHHhhcCCCc-cceEEEecCeeeecCc
Q psy1552 71 MHKKCMVIDLDETLVHSSF----------KY-------------------ADPVADLLDRWGV-FRARLFRESCVFHHGN 120 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~----------~Y-------------------Ad~Vid~LDp~g~-f~~rLyResC~~~~g~ 120 (220)
..++.+|+|||||++-.+- .| |-..++..+.+|. +-+.--|+.-.-. ..
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~-~~ 155 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEK-DG 155 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhccc-ch
Confidence 4567999999999987653 01 2223334455552 2222224433322 23
Q ss_pred cccccccccc--ccC-cEEEE-eCCCCccccC-CCceeecCCCCCCC
Q psy1552 121 YVKDLNKLGR--DLH-QVIIV-DNSPASYIFH-PDNAVPVASWFDDM 162 (220)
Q Consensus 121 yvKDLs~LgR--dL~-rVIIV-Dnsp~s~~~q-pdN~I~I~~f~gd~ 162 (220)
-+++|.++|. -++ .+++- |.++-..+++ .+-..-|.-++||.
T Consensus 156 T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~iVm~vGDN 202 (274)
T COG2503 156 TIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEKDYKIVMLVGDN 202 (274)
T ss_pred hHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhhccceeeEecCc
Confidence 5789988763 333 34433 4455544442 23355666677753
No 107
>PLN02423 phosphomannomutase
Probab=56.70 E-value=7.8 Score=33.85 Aligned_cols=17 Identities=24% Similarity=0.221 Sum_probs=13.2
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
+..+++||||||+.+..
T Consensus 7 ~~i~~~D~DGTLl~~~~ 23 (245)
T PLN02423 7 GVIALFDVDGTLTAPRK 23 (245)
T ss_pred ceEEEEeccCCCcCCCC
Confidence 34556999999997765
No 108
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=56.37 E-value=7.3 Score=32.15 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=13.5
Q ss_pred CCceEEEecCcceeec
Q psy1552 72 HKKCMVIDLDETLVHS 87 (220)
Q Consensus 72 ~k~tLVLDLDETLVhs 87 (220)
..+++++|+|+||+-+
T Consensus 12 ~~k~~~~D~Dgtl~~~ 27 (166)
T TIGR01664 12 QSKVAAFDLDGTLITT 27 (166)
T ss_pred cCcEEEEeCCCceEec
Confidence 4578999999999964
No 109
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=56.13 E-value=6.3 Score=32.69 Aligned_cols=18 Identities=33% Similarity=0.405 Sum_probs=14.7
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
..+++++|+||||++...
T Consensus 3 ~~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 3 MIKAILFDLDGTLLDFDS 20 (229)
T ss_pred ceeEEEEecCCcccccch
Confidence 346899999999999753
No 110
>PLN02954 phosphoserine phosphatase
Probab=55.28 E-value=6.9 Score=32.69 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=15.0
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
..+++++|+||||+-+..
T Consensus 11 ~~k~viFDfDGTL~~~~~ 28 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEG 28 (224)
T ss_pred cCCEEEEeCCCcccchHH
Confidence 457999999999997754
No 111
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=54.44 E-value=7.4 Score=32.07 Aligned_cols=16 Identities=38% Similarity=0.503 Sum_probs=11.6
Q ss_pred ceEEEecCcceeeccc
Q psy1552 74 KCMVIDLDETLVHSSF 89 (220)
Q Consensus 74 ~tLVLDLDETLVhss~ 89 (220)
+.+.+|||+|||....
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 4688999999998853
No 112
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=54.35 E-value=8 Score=30.76 Aligned_cols=15 Identities=13% Similarity=0.335 Sum_probs=13.3
Q ss_pred ceEEEecCcceeecc
Q psy1552 74 KCMVIDLDETLVHSS 88 (220)
Q Consensus 74 ~tLVLDLDETLVhss 88 (220)
++|++|+|+||+...
T Consensus 1 ~~~~~d~dgtl~~~~ 15 (147)
T TIGR01656 1 PALFLDRDGVINEDT 15 (147)
T ss_pred CeEEEeCCCceeccC
Confidence 579999999999876
No 113
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=53.99 E-value=7.5 Score=31.41 Aligned_cols=13 Identities=23% Similarity=0.634 Sum_probs=11.4
Q ss_pred ceEEEecCcceee
Q psy1552 74 KCMVIDLDETLVH 86 (220)
Q Consensus 74 ~tLVLDLDETLVh 86 (220)
+.+++|+|+||+-
T Consensus 2 ~~~~~D~Dgtl~~ 14 (154)
T TIGR01670 2 RLLILDVDGVLTD 14 (154)
T ss_pred eEEEEeCceeEEc
Confidence 4789999999985
No 114
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=53.54 E-value=7.9 Score=30.95 Aligned_cols=17 Identities=29% Similarity=0.341 Sum_probs=14.0
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
|..+|+|+||||+-...
T Consensus 1 ~~~iiFD~dgTL~~~~~ 17 (188)
T TIGR01489 1 KVVVVSDFDGTITLNDS 17 (188)
T ss_pred CeEEEEeCCCcccCCCc
Confidence 45789999999998754
No 115
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=52.94 E-value=6.5 Score=33.97 Aligned_cols=14 Identities=36% Similarity=0.437 Sum_probs=12.2
Q ss_pred EEEecCcceeeccc
Q psy1552 76 MVIDLDETLVHSSF 89 (220)
Q Consensus 76 LVLDLDETLVhss~ 89 (220)
+++||||||+++..
T Consensus 2 i~~DlDGTll~~~~ 15 (256)
T TIGR01486 2 IFTDLDGTLLDPHG 15 (256)
T ss_pred EEEcCCCCCcCCCC
Confidence 78999999998754
No 116
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=51.98 E-value=11 Score=33.50 Aligned_cols=16 Identities=31% Similarity=0.341 Sum_probs=13.8
Q ss_pred CCceEEEecCcceeec
Q psy1552 72 HKKCMVIDLDETLVHS 87 (220)
Q Consensus 72 ~k~tLVLDLDETLVhs 87 (220)
.+..+++|+||||+..
T Consensus 13 ~~~li~~D~DGTLl~~ 28 (266)
T PRK10187 13 ANYAWFFDLDGTLAEI 28 (266)
T ss_pred CCEEEEEecCCCCCCC
Confidence 4679999999999974
No 117
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=51.62 E-value=8.3 Score=31.96 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=13.1
Q ss_pred eEEEecCcceeeccc
Q psy1552 75 CMVIDLDETLVHSSF 89 (220)
Q Consensus 75 tLVLDLDETLVhss~ 89 (220)
++|+||||||+.+.+
T Consensus 2 ~viFDldgvL~d~~~ 16 (199)
T PRK09456 2 LYIFDLGNVIVDIDF 16 (199)
T ss_pred EEEEeCCCccccCcH
Confidence 689999999998754
No 118
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=50.83 E-value=15 Score=36.35 Aligned_cols=16 Identities=31% Similarity=0.513 Sum_probs=14.1
Q ss_pred CCceEEEecCcceeec
Q psy1552 72 HKKCMVIDLDETLVHS 87 (220)
Q Consensus 72 ~k~tLVLDLDETLVhs 87 (220)
..+++.+|+|+||+..
T Consensus 167 ~~Kia~fD~DGTLi~t 182 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKT 182 (526)
T ss_pred cCcEEEEECCCCcccc
Confidence 4689999999999975
No 119
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=48.62 E-value=9.7 Score=32.97 Aligned_cols=16 Identities=31% Similarity=0.468 Sum_probs=13.4
Q ss_pred CCceEEEecCcceeec
Q psy1552 72 HKKCMVIDLDETLVHS 87 (220)
Q Consensus 72 ~k~tLVLDLDETLVhs 87 (220)
++..|+||+||||+-.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 4678999999999864
No 120
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=47.77 E-value=11 Score=34.62 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=15.2
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
++..+|+|+|||++....
T Consensus 100 ~~dA~V~DIDET~LsN~p 117 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIP 117 (275)
T ss_pred CCCEEEEECccccccCHH
Confidence 678999999999996544
No 121
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=47.55 E-value=8.3 Score=32.85 Aligned_cols=14 Identities=36% Similarity=0.555 Sum_probs=12.0
Q ss_pred EEEecCcceeeccc
Q psy1552 76 MVIDLDETLVHSSF 89 (220)
Q Consensus 76 LVLDLDETLVhss~ 89 (220)
++.||||||+.+..
T Consensus 2 i~~DlDgTLl~~~~ 15 (236)
T TIGR02471 2 IITDLDNTLLGDDE 15 (236)
T ss_pred eEEeccccccCCHH
Confidence 78999999998654
No 122
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=47.11 E-value=10 Score=31.15 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=19.9
Q ss_pred EEEecCcceeecc------------c--ccHHHHHHhhcCCC
Q psy1552 76 MVIDLDETLVHSS------------F--KYADPVADLLDRWG 103 (220)
Q Consensus 76 LVLDLDETLVhss------------~--~YAd~Vid~LDp~g 103 (220)
+++|+||||+.+. | ..+..++..+-.+|
T Consensus 2 VisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G 43 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNG 43 (157)
T ss_pred EEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcC
Confidence 7899999999886 2 44555566665455
No 123
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=46.69 E-value=9.1 Score=32.68 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.7
Q ss_pred eEEEecCcceeeccc
Q psy1552 75 CMVIDLDETLVHSSF 89 (220)
Q Consensus 75 tLVLDLDETLVhss~ 89 (220)
..|+|||+|||-..|
T Consensus 3 la~FDlD~TLi~~~w 17 (203)
T TIGR02137 3 IACLDLEGVLVPEIW 17 (203)
T ss_pred EEEEeCCcccHHHHH
Confidence 479999999997666
No 124
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=46.09 E-value=11 Score=32.17 Aligned_cols=18 Identities=33% Similarity=0.523 Sum_probs=15.4
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
.++..++|+||||++...
T Consensus 4 ~~~la~FDfDgTLt~~ds 21 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDM 21 (210)
T ss_pred cCcEEEEcCCCCCccCcc
Confidence 467899999999999864
No 125
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=45.84 E-value=11 Score=32.96 Aligned_cols=13 Identities=38% Similarity=0.613 Sum_probs=11.9
Q ss_pred CceEEEecCccee
Q psy1552 73 KKCMVIDLDETLV 85 (220)
Q Consensus 73 k~tLVLDLDETLV 85 (220)
+..||-|||+||+
T Consensus 2 ~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 2 PRLLASDLDGTLI 14 (247)
T ss_dssp SEEEEEETBTTTB
T ss_pred CEEEEEECCCCCc
Confidence 5689999999999
No 126
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=44.01 E-value=12 Score=31.52 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=14.2
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
+.+++.|+|+||+-+..
T Consensus 3 ~~~vifDfDgTi~~~d~ 19 (219)
T PRK09552 3 SIQIFCDFDGTITNNDN 19 (219)
T ss_pred CcEEEEcCCCCCCcchh
Confidence 56899999999997754
No 127
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=43.72 E-value=20 Score=36.88 Aligned_cols=18 Identities=39% Similarity=0.455 Sum_probs=15.3
Q ss_pred CCCceEEEecCcceeecc
Q psy1552 71 MHKKCMVIDLDETLVHSS 88 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss 88 (220)
+.++.++.||||||+...
T Consensus 414 ~~~KLIfsDLDGTLLd~d 431 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPL 431 (694)
T ss_pred ceeeEEEEECcCCCcCCC
Confidence 457899999999999864
No 128
>PLN02887 hydrolase family protein
Probab=42.36 E-value=16 Score=36.52 Aligned_cols=18 Identities=28% Similarity=0.350 Sum_probs=14.7
Q ss_pred CCceEEEecCcceeeccc
Q psy1552 72 HKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~ 89 (220)
..+.+++||||||+.+..
T Consensus 307 ~iKLIa~DLDGTLLn~d~ 324 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKS 324 (580)
T ss_pred CccEEEEeCCCCCCCCCC
Confidence 356999999999998653
No 129
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=40.58 E-value=24 Score=37.75 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=15.0
Q ss_pred CceEEEecCcceeeccc
Q psy1552 73 KKCMVIDLDETLVHSSF 89 (220)
Q Consensus 73 k~tLVLDLDETLVhss~ 89 (220)
-+.+++||||||+.+..
T Consensus 75 ikaVIFDlDGTLiDS~~ 91 (1057)
T PLN02919 75 VSAVLFDMDGVLCNSEE 91 (1057)
T ss_pred CCEEEECCCCCeEeChH
Confidence 46899999999999975
No 130
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=40.05 E-value=20 Score=33.03 Aligned_cols=18 Identities=22% Similarity=0.370 Sum_probs=14.9
Q ss_pred CCCceEEEecCcceeecc
Q psy1552 71 MHKKCMVIDLDETLVHSS 88 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss 88 (220)
.....+|+|+|+|||...
T Consensus 108 ~~~~LvvfDmDGTLI~~e 125 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIE 125 (322)
T ss_pred cCCCEEEEECCCCCcchH
Confidence 356899999999999654
No 131
>KOG2914|consensus
Probab=39.59 E-value=23 Score=31.25 Aligned_cols=30 Identities=37% Similarity=0.653 Sum_probs=25.0
Q ss_pred ceEEEecCcceeecccccHHHHHHhhcCCC
Q psy1552 74 KCMVIDLDETLVHSSFKYADPVADLLDRWG 103 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~YAd~Vid~LDp~g 103 (220)
-.+.+|+|+|||-++.-|.+...+.+++++
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~yg 40 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYG 40 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcC
Confidence 367899999999998888888888887655
No 132
>COG4996 Predicted phosphatase [General function prediction only]
Probab=39.46 E-value=33 Score=28.81 Aligned_cols=81 Identities=11% Similarity=0.068 Sum_probs=42.8
Q ss_pred HHHHHHhhcCCCccceEEEecCeeeecCcccccccccc------cccCcEEEEeCCCCccc---cCCCceeecCCCCCCC
Q psy1552 92 ADPVADLLDRWGVFRARLFRESCVFHHGNYVKDLNKLG------RDLHQVIIVDNSPASYI---FHPDNAVPVASWFDDM 162 (220)
Q Consensus 92 Ad~Vid~LDp~g~f~~rLyResC~~~~g~yvKDLs~Lg------RdL~rVIIVDnsp~s~~---~qpdN~I~I~~f~gd~ 162 (220)
|-+++..||-..+|.+..-..+=.. .-...+=|..++ -..++||.+||...-+. ..-+|.=.++.|.+-
T Consensus 71 A~~aLral~~~~yFhy~ViePhP~K-~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di- 148 (164)
T COG4996 71 AIKALRALDLLQYFHYIVIEPHPYK-FLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDI- 148 (164)
T ss_pred HHHHHHHhchhhhEEEEEecCCChh-HHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecch-
Confidence 4455556666566655443332210 011122222222 23568999999987663 356777777788764
Q ss_pred CchHHHHHHHHHhh
Q psy1552 163 TDTELYDLVPFFER 176 (220)
Q Consensus 163 ~D~eLl~Llp~Le~ 176 (220)
..-..+.++|..
T Consensus 149 --~c~~ei~slLs~ 160 (164)
T COG4996 149 --SCYSEIFSLLSH 160 (164)
T ss_pred --HHHHHHHHHHHh
Confidence 233445555543
No 133
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=38.91 E-value=20 Score=30.99 Aligned_cols=24 Identities=21% Similarity=0.170 Sum_probs=16.4
Q ss_pred EEEecCcceeecccc--cHHHHHHhh
Q psy1552 76 MVIDLDETLVHSSFK--YADPVADLL 99 (220)
Q Consensus 76 LVLDLDETLVhss~~--YAd~Vid~L 99 (220)
+++|+||||+.+... .|...+..+
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l 26 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRL 26 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHH
Confidence 479999999988763 344444444
No 134
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=38.05 E-value=15 Score=29.19 Aligned_cols=13 Identities=31% Similarity=0.560 Sum_probs=11.2
Q ss_pred EEEecCcceeecc
Q psy1552 76 MVIDLDETLVHSS 88 (220)
Q Consensus 76 LVLDLDETLVhss 88 (220)
+|+|+|+||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999764
No 135
>PLN02382 probable sucrose-phosphatase
Probab=36.96 E-value=19 Score=34.31 Aligned_cols=16 Identities=38% Similarity=0.530 Sum_probs=13.7
Q ss_pred CCceEEEecCcceeec
Q psy1552 72 HKKCMVIDLDETLVHS 87 (220)
Q Consensus 72 ~k~tLVLDLDETLVhs 87 (220)
.+..||.||||||+-.
T Consensus 8 ~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 8 PRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCEEEEEcCCCcCcCC
Confidence 5778999999999954
No 136
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=36.53 E-value=20 Score=30.88 Aligned_cols=16 Identities=50% Similarity=0.663 Sum_probs=13.8
Q ss_pred CCceEEEecCcceeec
Q psy1552 72 HKKCMVIDLDETLVHS 87 (220)
Q Consensus 72 ~k~tLVLDLDETLVhs 87 (220)
.++.+|+|||+|||-.
T Consensus 4 ~~~L~vFD~D~TLi~~ 19 (212)
T COG0560 4 MKKLAVFDLDGTLINA 19 (212)
T ss_pred ccceEEEecccchhhH
Confidence 5678999999999983
No 137
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.51 E-value=17 Score=29.05 Aligned_cols=13 Identities=38% Similarity=0.664 Sum_probs=11.6
Q ss_pred EEEecCcceeecc
Q psy1552 76 MVIDLDETLVHSS 88 (220)
Q Consensus 76 LVLDLDETLVhss 88 (220)
+++|+||||+-+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999886
No 138
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=35.24 E-value=30 Score=31.36 Aligned_cols=32 Identities=22% Similarity=0.169 Sum_probs=23.8
Q ss_pred CCceEEEecCcceeeccc--ccHHHHHHhhcCCC
Q psy1552 72 HKKCMVIDLDETLVHSSF--KYADPVADLLDRWG 103 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~--~YAd~Vid~LDp~g 103 (220)
...++.+||||||++... ..|...++.|-..+
T Consensus 7 ~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g 40 (269)
T COG0647 7 KYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAG 40 (269)
T ss_pred hcCEEEEcCcCceEeCCccCchHHHHHHHHHHcC
Confidence 345799999999999876 56777777664443
No 139
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=35.08 E-value=33 Score=27.73 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=14.3
Q ss_pred ceEEEecCcceeeccccc
Q psy1552 74 KCMVIDLDETLVHSSFKY 91 (220)
Q Consensus 74 ~tLVLDLDETLVhss~~Y 91 (220)
.++++|.||||......+
T Consensus 2 ~~i~fDktGTLt~~~~~v 19 (215)
T PF00702_consen 2 DAICFDKTGTLTQGKMSV 19 (215)
T ss_dssp SEEEEECCTTTBESHHEE
T ss_pred eEEEEecCCCcccCeEEE
Confidence 489999999997765544
No 140
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=34.37 E-value=18 Score=29.55 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.3
Q ss_pred EEEecCcceeecc
Q psy1552 76 MVIDLDETLVHSS 88 (220)
Q Consensus 76 LVLDLDETLVhss 88 (220)
.++|+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999864
No 141
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=33.07 E-value=28 Score=29.89 Aligned_cols=48 Identities=19% Similarity=0.342 Sum_probs=27.7
Q ss_pred HHHhhcCCC-ccceEEEec-----Ceeeec---CcccccccccccccCcEEEEeCCC
Q psy1552 95 VADLLDRWG-VFRARLFRE-----SCVFHH---GNYVKDLNKLGRDLHQVIIVDNSP 142 (220)
Q Consensus 95 Vid~LDp~g-~f~~rLyRe-----sC~~~~---g~yvKDLs~LgRdL~rVIIVDnsp 142 (220)
+...|--.+ .|..+||.. .|.... |-+..=+...+-|+++.++|=|+.
T Consensus 76 m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~ 132 (181)
T COG0241 76 MLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL 132 (181)
T ss_pred HHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcH
Confidence 444443333 577777743 244332 444444555678888888887764
No 142
>PLN03017 trehalose-phosphatase
Probab=32.50 E-value=25 Score=33.40 Aligned_cols=15 Identities=33% Similarity=0.397 Sum_probs=13.0
Q ss_pred CCCceEEEecCccee
Q psy1552 71 MHKKCMVIDLDETLV 85 (220)
Q Consensus 71 ~~k~tLVLDLDETLV 85 (220)
.++..|++|+||||+
T Consensus 109 ~k~~llflD~DGTL~ 123 (366)
T PLN03017 109 GKQIVMFLDYDGTLS 123 (366)
T ss_pred CCCeEEEEecCCcCc
Confidence 357889999999999
No 143
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=31.70 E-value=24 Score=29.45 Aligned_cols=21 Identities=14% Similarity=0.120 Sum_probs=15.2
Q ss_pred cccccccccCcEEEEeCCCCc
Q psy1552 124 DLNKLGRDLHQVIIVDNSPAS 144 (220)
Q Consensus 124 DLs~LgRdL~rVIIVDnsp~s 144 (220)
=+..+|-+.+++++|-|++.-
T Consensus 90 ~~~~l~~~~~ev~~iGD~~nD 110 (169)
T TIGR02726 90 MLEEMNISDAEVCYVGDDLVD 110 (169)
T ss_pred HHHHcCcCHHHEEEECCCHHH
Confidence 345667777899999887643
No 144
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=30.18 E-value=49 Score=29.20 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=14.9
Q ss_pred CCceEEEecCcceeecc
Q psy1552 72 HKKCMVIDLDETLVHSS 88 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss 88 (220)
...++-+|+|+|+..|+
T Consensus 62 ~Pi~VsFDIDDTvLFsS 78 (237)
T COG3700 62 PPIAVSFDIDDTVLFSS 78 (237)
T ss_pred CCeeEeeccCCeeEecc
Confidence 45689999999999997
No 145
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=29.62 E-value=75 Score=29.89 Aligned_cols=15 Identities=40% Similarity=0.603 Sum_probs=13.6
Q ss_pred CceEEEecCcceeec
Q psy1552 73 KKCMVIDLDETLVHS 87 (220)
Q Consensus 73 k~tLVLDLDETLVhs 87 (220)
++.|+||-|+||+..
T Consensus 2 ~k~l~lDrDgtl~~~ 16 (354)
T PRK05446 2 QKILFIDRDGTLIEE 16 (354)
T ss_pred CcEEEEeCCCCccCC
Confidence 679999999999986
No 146
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=29.57 E-value=24 Score=31.35 Aligned_cols=10 Identities=50% Similarity=1.016 Sum_probs=0.0
Q ss_pred EEEecCccee
Q psy1552 76 MVIDLDETLV 85 (220)
Q Consensus 76 LVLDLDETLV 85 (220)
||+|+|+||+
T Consensus 23 vvfDiDdTLi 32 (252)
T PF11019_consen 23 VVFDIDDTLI 32 (252)
T ss_pred EEEEcchhhh
No 147
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=29.54 E-value=35 Score=27.43 Aligned_cols=58 Identities=12% Similarity=0.180 Sum_probs=41.0
Q ss_pred ccHHHHHHhhcCCCccceEEEecCeeeecC---cccccccccccccCcEEEEeCCCCcccc
Q psy1552 90 KYADPVADLLDRWGVFRARLFRESCVFHHG---NYVKDLNKLGRDLHQVIIVDNSPASYIF 147 (220)
Q Consensus 90 ~YAd~Vid~LDp~g~f~~rLyResC~~~~g---~yvKDLs~LgRdL~rVIIVDnsp~s~~~ 147 (220)
.++..+++.+.=.++|...+..+++..... .|..-+.++|.+.+.+|+|+|++.-+..
T Consensus 114 ~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~a 174 (188)
T PRK10725 114 AIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQA 174 (188)
T ss_pred HHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHH
Confidence 677777777755567888777776543221 3556667788888999999998765543
No 148
>PLN02151 trehalose-phosphatase
Probab=29.32 E-value=30 Score=32.70 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=12.7
Q ss_pred CCceEEEecCccee
Q psy1552 72 HKKCMVIDLDETLV 85 (220)
Q Consensus 72 ~k~tLVLDLDETLV 85 (220)
++..|+||+||||+
T Consensus 97 ~~~ll~lDyDGTL~ 110 (354)
T PLN02151 97 KQIVMFLDYDGTLS 110 (354)
T ss_pred CceEEEEecCccCC
Confidence 56899999999999
No 149
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=28.89 E-value=40 Score=30.60 Aligned_cols=82 Identities=27% Similarity=0.249 Sum_probs=43.9
Q ss_pred CCceEEEecCcceeeccc--ccHHHHHHhhcCCCccceEEEecCeeeecCcccccccccccccCcEEEEeCCCCccccCC
Q psy1552 72 HKKCMVIDLDETLVHSSF--KYADPVADLLDRWGVFRARLFRESCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHP 149 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~--~YAd~Vid~LDp~g~f~~rLyResC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qp 149 (220)
....+.+|||+|||-.++ .=|.||+..+--.|+ .-.+....+....-.|.|-|..=|+ ..|-+|-.. ++=|
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~-~Vi~~SSKT~aE~~~l~~~l~v~~~----p~iaEnG~a--I~~p 78 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGV-PVILCSSKTRAEMLYLQKSLGVQGL----PLIAENGAA--IYLP 78 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHcCC-eEEEeccchHHHHHHHHHhcCCCCC----ceeecCCce--EEec
Confidence 345789999999997444 668888877744442 2222222222222334555555453 345555332 3345
Q ss_pred CceeecCCCCC
Q psy1552 150 DNAVPVASWFD 160 (220)
Q Consensus 150 dN~I~I~~f~g 160 (220)
.+-.+.+-+..
T Consensus 79 ~~~~~~~~~~r 89 (274)
T COG3769 79 KGWFPFDGKPR 89 (274)
T ss_pred ccccccCCCCc
Confidence 55555554444
No 150
>TIGR02603 CxxCH_TIGR02603 putative heme-binding domain, Pirellula/Verrucomicrobium type. This model represents a domain limited to very few species but expanded into large paralogous families in some species that conain it. We find it in over 20 copies each in Pirellula sp. strain 1 (phylum Planctomycetes) and Verrucomicrobium spinosum DSM 4136 (phylum Verrucomicrobia), and no matches above trusted cutoff an any other species so far. This domain, about 140 amino acids long, contains an absolutely conserved motif CxxCH, the cytochrome c family heme-binding site signature (PS00190).
Probab=28.54 E-value=85 Score=24.91 Aligned_cols=21 Identities=29% Similarity=0.491 Sum_probs=17.1
Q ss_pred CCCCCCCchHHHHHHHHHhhc
Q psy1552 157 SWFDDMTDTELYDLVPFFERL 177 (220)
Q Consensus 157 ~f~gd~~D~eLl~Llp~Le~L 177 (220)
-+.....+.|+.+|+.||+.|
T Consensus 113 gl~~~Lt~~e~~dL~aYL~s~ 133 (133)
T TIGR02603 113 GLEMGLSDQDLADLVAYLKSL 133 (133)
T ss_pred hhhccCCHHHHHHHHHHHhhC
Confidence 356678899999999999764
No 151
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=27.61 E-value=38 Score=30.69 Aligned_cols=19 Identities=26% Similarity=0.333 Sum_probs=16.3
Q ss_pred CCCceEEEecCcceeeccc
Q psy1552 71 MHKKCMVIDLDETLVHSSF 89 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss~ 89 (220)
.++.+++||.||||++..-
T Consensus 16 a~~~~~~lDyDGTl~~i~~ 34 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIVP 34 (266)
T ss_pred ccceEEEEecccccccccc
Confidence 4788999999999998753
No 152
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=27.03 E-value=34 Score=28.38 Aligned_cols=14 Identities=29% Similarity=0.368 Sum_probs=11.0
Q ss_pred ceEEEecCcceeec
Q psy1552 74 KCMVIDLDETLVHS 87 (220)
Q Consensus 74 ~tLVLDLDETLVhs 87 (220)
..|.+|+||||...
T Consensus 3 i~I~iDiDgVLad~ 16 (191)
T PF06941_consen 3 IRIAIDIDGVLADF 16 (191)
T ss_dssp EEEEEESBTTTB-H
T ss_pred cEEEEECCCCCccc
Confidence 34999999999764
No 153
>PHA00028 rep RNA replicase, beta subunit
Probab=26.28 E-value=1e+02 Score=30.98 Aligned_cols=87 Identities=23% Similarity=0.314 Sum_probs=54.1
Q ss_pred ccHHHHHHhhc-----C--CCccceEEEecCeeeecCcccccccccccccCcEEEEeCCCCccccCCCceeecCCCCCCC
Q psy1552 90 KYADPVADLLD-----R--WGVFRARLFRESCVFHHGNYVKDLNKLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDM 162 (220)
Q Consensus 90 ~YAd~Vid~LD-----p--~g~f~~rLyResC~~~~g~yvKDLs~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~ 162 (220)
+-|+++++.+. | ++-|-.-.|||+|--+ ---++-|+||+-..
T Consensus 348 ~~a~~li~vlsyvgF~pN~kKTF~~G~FRESCGaH-------------------------------~f~GvDVtPFYik~ 396 (561)
T PHA00028 348 EVAPPLINVLSYVGFMPNLKKTFWTGPFRESCGAH-------------------------------YFAGVDVTPFYIKR 396 (561)
T ss_pred hhhHHHHHHHHHhceecCCccccccCcchhhhhhh-------------------------------hcCCCCccceEecc
Confidence 66888888773 3 3456555899999642 11255566666543
Q ss_pred CchHHHHHHHHHhhccC--------CCChHHHHhhcCCCCCCCCCCCCCCCCCC
Q psy1552 163 TDTELYDLVPFFERLSK--------MDSVYSFLRNSNHPYNMQPSLGGGGSNNG 208 (220)
Q Consensus 163 ~D~eLl~Llp~Le~L~~--------~~DVR~vL~~~~~~~~~~~~~~~~~~~~~ 208 (220)
-=..|.+|+-+|..|.. -+.+.++-.+|+. -.|..+...||+.-|
T Consensus 397 pi~~l~dlililN~l~~W~tv~Gi~DPr~~~v~~k~~~-liP~~~~i~~G~~~~ 449 (561)
T PHA00028 397 PLDNLPDLILILNSLRRWGTVTGISDPRLYPLYNKYRD-LIPKTLVLPGGYDLG 449 (561)
T ss_pred cccCHHHHHHHHHHhhccccccCccCcchHHHHHHHHH-hCCCccccCCCCCCc
Confidence 33456788888887752 4567777777765 344435666666544
No 154
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=26.09 E-value=59 Score=27.89 Aligned_cols=28 Identities=11% Similarity=0.064 Sum_probs=19.8
Q ss_pred CceEEEecCcceeeccc--ccHHHHHHhhc
Q psy1552 73 KKCMVIDLDETLVHSSF--KYADPVADLLD 100 (220)
Q Consensus 73 k~tLVLDLDETLVhss~--~YAd~Vid~LD 100 (220)
-.++++|+||||.+... ..|..+++.|-
T Consensus 8 ~~~~~~D~dG~l~~~~~~~pga~e~L~~L~ 37 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGNHTYPGAVQNLNKII 37 (242)
T ss_pred CCEEEEecccccccCCccCccHHHHHHHHH
Confidence 45899999999997754 44555555554
No 155
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=24.78 E-value=47 Score=32.65 Aligned_cols=17 Identities=35% Similarity=0.456 Sum_probs=14.5
Q ss_pred CCceEEEecCcceeecc
Q psy1552 72 HKKCMVIDLDETLVHSS 88 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss 88 (220)
...++|.|+||||.++.
T Consensus 21 ~~~~~~FDfDGTLt~~~ 37 (497)
T PLN02177 21 SNQTVAADLDGTLLISR 37 (497)
T ss_pred cccEEEEecCCcccCCC
Confidence 45689999999999964
No 156
>KOG2832|consensus
Probab=22.38 E-value=2.5 Score=40.23 Aligned_cols=71 Identities=23% Similarity=0.173 Sum_probs=57.2
Q ss_pred EEEecCeeeecCccccccc-ccccccCcEEEEeCCCCccccCCCceeecCCCCCCCCchHHHHHHHHHhhcc
Q psy1552 108 RLFRESCVFHHGNYVKDLN-KLGRDLHQVIIVDNSPASYIFHPDNAVPVASWFDDMTDTELYDLVPFFERLS 178 (220)
Q Consensus 108 rLyResC~~~~g~yvKDLs-~LgRdL~rVIIVDnsp~s~~~qpdN~I~I~~f~gd~~D~eLl~Llp~Le~L~ 178 (220)
.++++.-....|..+||++ .+.+.+.|+..+.++...|..+|.++..+++|...+.++....|+.-|+.+.
T Consensus 129 y~~g~~~~de~G~i~ddfs~~l~~~~~R~~~~~~~~~~~~~EP~~~~LLPdpl~pPy~Qp~yTLVleledvL 200 (393)
T KOG2832|consen 129 YLTGEPSRDEKGKIIDDFSNYLVQYLRRVWKIFNSYERMFKEPDRAKLLPDPLPPPYEQPPYTLVLELEDVL 200 (393)
T ss_pred EEecCCccccCCCcchhHHHHHHHHHHHHHHHHHhHHHHhcCCchhhhCCCCCCCcccCCCceEEEEeeeeE
Confidence 4556666666788889998 7888999999999999999999999999999998877776666655555543
No 157
>KOG3120|consensus
Probab=21.72 E-value=99 Score=28.03 Aligned_cols=18 Identities=22% Similarity=0.466 Sum_probs=15.4
Q ss_pred CCCceEEEecCcceeecc
Q psy1552 71 MHKKCMVIDLDETLVHSS 88 (220)
Q Consensus 71 ~~k~tLVLDLDETLVhss 88 (220)
..|..+|+|.|+|+|--.
T Consensus 11 ~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQD 28 (256)
T ss_pred CCcEEEEEecCceeecCC
Confidence 478899999999999754
No 158
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=21.33 E-value=95 Score=30.85 Aligned_cols=32 Identities=31% Similarity=0.358 Sum_probs=24.8
Q ss_pred CCceEEEecCcceeeccc--------------ccHHHHHHhhcCCC
Q psy1552 72 HKKCMVIDLDETLVHSSF--------------KYADPVADLLDRWG 103 (220)
Q Consensus 72 ~k~tLVLDLDETLVhss~--------------~YAd~Vid~LDp~g 103 (220)
.+|.+|-|+|||+..|.+ .|+..+--.|+.+|
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNG 419 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNG 419 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCc
Confidence 468999999999999876 45566666677765
No 159
>PTZ00445 p36-lilke protein; Provisional
Probab=20.34 E-value=45 Score=29.68 Aligned_cols=24 Identities=4% Similarity=0.131 Sum_probs=18.5
Q ss_pred cccccccccCcEEEEeCCCCcccc
Q psy1552 124 DLNKLGRDLHQVIIVDNSPASYIF 147 (220)
Q Consensus 124 DLs~LgRdL~rVIIVDnsp~s~~~ 147 (220)
=+.+.|-+.+.+|.|||++.++..
T Consensus 170 ll~~~gl~peE~LFIDD~~~NVea 193 (219)
T PTZ00445 170 VCSDFNVNPDEILFIDDDMNNCKN 193 (219)
T ss_pred HHHHcCCCHHHeEeecCCHHHHHH
Confidence 345568889999999998877654
Done!