BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15524
(930 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307210507|gb|EFN87010.1| Probable ATP-dependent RNA helicase DDX31 [Harpegnathos saltator]
Length = 874
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 320/631 (50%), Positives = 430/631 (68%), Gaps = 53/631 (8%)
Query: 342 NIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPF 401
N D D + P+ + G ISSLF NNPDIP + R +KPV E +F ++E+ IH
Sbjct: 247 NDDRDLDKNPRLSHRPGGKISSLFGNNPDIPTIGQRFVKPVDEPIFTEITFEDL-NIHSH 305
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
M NL + MNIT++TTVQQ +I I D+LVRSQTGSGKTLAYAIPI++ L ++RPK+
Sbjct: 306 MISNLAQNMNITKMTTVQQKAIPQIFSAKDILVRSQTGSGKTLAYAIPIVELLHKIRPKL 365
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
+R G+ A+I++PTREL LQT E F KL K FTWIVP +L GGEK K+EKAR+RKG ++L
Sbjct: 366 NRNSGLLALIVVPTRELTLQTYECFIKLVKPFTWIVPGYLIGGEKRKAEKARLRKGCNVL 425
Query: 522 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK----KQKPQF 577
+ATPGRLLDH ++T+ LK +V++ VLDEADR+LD GYE+DI+ +I + K + +
Sbjct: 426 IATPGRLLDHMQNTKALKLHEVKYFVLDEADRMLDMGYEKDISGTRDIEQNREDKDQSRR 485
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+ +++PI +DAA + D+ + LV+P S+ Q++IV
Sbjct: 486 QTILLSATLTQAVEKLAGLAMRSPIFVDAAKANLEMSAGDVSEINEDLVVPQSVSQNYIV 545
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------- 683
TPPKLR+V L+++I GKCQ + K+L+FMATQDM DYHTE+LS++L +
Sbjct: 546 TPPKLRMVTLSAYIAGKCQTPG---QHKILIFMATQDMVDYHTEILSSILTKPINDDDED 602
Query: 684 -----NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
++ FFKL+G+M Q ERTEVFKTFR KSGVL+CTDVAARGLD+P VD +VQYT P
Sbjct: 603 SDPLVDVEFFKLYGNMPQKERTEVFKTFRQAKSGVLLCTDVAARGLDMPKVDCVVQYTGP 662
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+S+ DYVHR+GRTAR G G+ +FL PSE+ V L++RRIRI++ + D L LL
Sbjct: 663 TSARDYVHRIGRTARAGSSGTGTIFLTPSEIDFVRMLESRRIRIKQQDMNDVLDKLL--- 719
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
G LS+ +V+ AATALQ FE+ +L+ + L+ ACK Y SWV FY+SY +D+R IF
Sbjct: 720 --GPLSK--HNSVQAAATALQNDFENLLLENRQLNAKACKAYASWVCFYSSYPRDMREIF 775
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIGK---------PKNKEELKNK-------KMAINK 902
N K +HLGH+AKSFALRD P I GI K PK+ L NK K+ +
Sbjct: 776 NRKALHLGHYAKSFALRDPPQRIGGISKRLREEESSRPKHNNRLSNKPSDGVSQKVPKGQ 835
Query: 903 EKSFKQRGNFSKKQML--SEFDSGL-PQRKP 930
+ ++ G + +ML SE+DSGL P +KP
Sbjct: 836 DGEGQRTGLLKRVRMLNISEYDSGLEPLKKP 866
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 206/341 (60%), Gaps = 74/341 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MNIT++TTVQQ +I I D+LVRSQTGSGKTLAYAIPI++ L ++RPK++R G+ A
Sbjct: 314 MNITKMTTVQQKAIPQIFSAKDILVRSQTGSGKTLAYAIPIVELLHKIRPKLNRNSGLLA 373
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTREL LQT E F KL K FTWIVP +L GGEK K+EKA RL
Sbjct: 374 LIVVPTRELTLQTYECFIKLVKPFTWIVPGYLIGGEKRKAEKA--------------RLR 419
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
C ++++ R+LD
Sbjct: 420 KGC------------NVLIATPGRLLDH-------------------------------- 435
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK----KQKPQFQSVLLSA 236
++T+ LK +V++ VLDEADR+LD GYE+DI+ +I + K + + Q++LLSA
Sbjct: 436 ---MQNTKALKLHEVKYFVLDEADRMLDMGYEKDISGTRDIEQNREDKDQSRRQTILLSA 492
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIVTPPKLRL 290
TLT AV++LAG+ +++PI +DAA + D+ + LV+P S+ Q++IVTPPKLR+
Sbjct: 493 TLTQAVEKLAGLAMRSPIFVDAAKANLEMSAGDVSEINEDLVVPQSVSQNYIVTPPKLRM 552
Query: 291 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
V L+++I GKCQ + K+L+FMATQDM DYHTE+LS+
Sbjct: 553 VTLSAYIAGKCQTPG---QHKILIFMATQDMVDYHTEILSS 590
>gi|307179995|gb|EFN68085.1| Probable ATP-dependent RNA helicase DDX31 [Camponotus floridanus]
Length = 871
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 317/649 (48%), Positives = 432/649 (66%), Gaps = 65/649 (10%)
Query: 331 TKKKIKKLKEYNIDP--DNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFA 388
K+ KK KE ++ ++ P+ G ISSLF NNPD+P + R +KPV E +F
Sbjct: 226 NKRNEKKHKEKTVNNHRESDNTPQLLRKGGGKISSLFGNNPDVPIIGQRLVKPVDEPIFT 285
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
++ + IHPFM NL + M+IT++TTVQQ +I I G DVL+RSQTGSGKTLAYA+
Sbjct: 286 KITFADL-NIHPFMISNLEQNMHITKMTTVQQKAIPEIFSGKDVLIRSQTGSGKTLAYAL 344
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
PI++ L ++RPK++R G+ A+I++PTRELALQT E F KL K FTWIVP ++ GGEK K
Sbjct: 345 PIVELLHKIRPKLNRNSGLSALIVVPTRELALQTYECFIKLVKPFTWIVPGYIIGGEKRK 404
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
+EKAR+RKG +IL+ TPGRLLDH KHT+ L+ ++V + +LDEADR+L+ GYE++I++ +
Sbjct: 405 AEKARLRKGCNILITTPGRLLDHIKHTKALRLNEVRYFILDEADRMLEMGYEKNISDMNQ 464
Query: 569 ILKKQKPQFQ---------------SILLSATLTPAVQRLAGMTLQNPIQIDAADST--- 610
+ Q +ILLSATLT AV++LAG+ + NPI +DAA
Sbjct: 465 EFDSKAENAQNIEQDCKDVTQSRRKTILLSATLTQAVEKLAGLAMYNPIFVDAAKENLET 524
Query: 611 ---DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQ 667
D + L++P S+ Q +IVTPPKLR+V L+++I+ +CQ + K+L+FMATQ
Sbjct: 525 SGGDTSEINEDLIVPQSVIQSYIVTPPKLRMVTLSAYIVSRCQTPG---QHKILIFMATQ 581
Query: 668 DMADYHTELLSTVLGE--------------NIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
DM DYHTE+LS++L E N+ FFKLHG+M+Q ERTEVFKTF KSGV
Sbjct: 582 DMVDYHTEILSSILTESVDDNDDEDSDPLVNVEFFKLHGNMTQKERTEVFKTFSRAKSGV 641
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
L+CTDVAARGLD+P VD +VQYT P S+ DYVHR+GRTAR G G++ +FL PSEV+ V
Sbjct: 642 LLCTDVAARGLDMPKVDCVVQYTGPISTRDYVHRIGRTARAGCSGTATIFLTPSEVEFVR 701
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L++RRIRI++ + D L LL G LS+ +V+ AA ALQ +FE+ VL+ K L
Sbjct: 702 MLESRRIRIKQQNMNDILDKLL-----GPLSK--HNSVQAAAIALQNNFENLVLENKQLG 754
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP-KNKEE 892
A K YTSW+RFY+SY +D+R IFN K++HLGH+AKSFALRD+P I GIGK + KE
Sbjct: 755 AKAYKAYTSWMRFYSSYPRDMREIFNRKELHLGHYAKSFALRDSPHRIGGIGKKLREKEG 814
Query: 893 LK---NKKM-----AINKEKSFKQRGNFSKKQML--------SEFDSGL 925
LK N ++ + +++ KQ G+ + +L SE+DSGL
Sbjct: 815 LKPNHNNRLHKPSDGVPQKEQRKQNGDRQRTGLLKRARMLNTSEYDSGL 863
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 218/337 (64%), Gaps = 55/337 (16%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+IT++TTVQQ +I I G DVL+RSQTGSGKTLAYA+PI++ L ++RPK++R G+ A
Sbjct: 306 MHITKMTTVQQKAIPEIFSGKDVLIRSQTGSGKTLAYALPIVELLHKIRPKLNRNSGLSA 365
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQT E F KL K FTWIVP ++ GGEK K+EKAR+RKG +IL+ TPGRLL
Sbjct: 366 LIVVPTRELALQTYECFIKLVKPFTWIVPGYIIGGEKRKAEKARLRKGCNILITTPGRLL 425
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH KHT+ L+ ++V + +LDEADR+L+ GYE++I++ + +F S +A
Sbjct: 426 DHIKHTKALRLNEVRYFILDEADRMLEMGYEKNISDMNQ-------EFDSKAENA----- 473
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
Q E+D + + +K ++LLSATLT
Sbjct: 474 ----------------------------QNIEQDCKDVTQSRRK------TILLSATLTQ 499
Query: 241 AVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
AV++LAG+ + NPI +DAA D + L++P S+ Q +IVTPPKLR+V L+
Sbjct: 500 AVEKLAGLAMYNPIFVDAAKENLETSGGDTSEINEDLIVPQSVIQSYIVTPPKLRMVTLS 559
Query: 295 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
++I+ +CQ + K+L+FMATQDM DYHTE+LS+
Sbjct: 560 AYIVSRCQTPG---QHKILIFMATQDMVDYHTEILSS 593
>gi|242014121|ref|XP_002427746.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212512187|gb|EEB15008.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 821
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 309/610 (50%), Positives = 408/610 (66%), Gaps = 72/610 (11%)
Query: 346 DNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKN 405
DNY K E K G ++SLF NNP+IPN+P R +KP+ E +F+ +E+ +H +M K
Sbjct: 213 DNYS--KVKEHKMGKVTSLFYNNPEIPNIPHRAVKPIKEDVFSNLKFEDL-NLHSYMVKY 269
Query: 406 LNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 465
L E M +TQVTTVQ+ SI +LDG D L+RSQTGSGKTLA+A+P++ KLQE+RPKI+R D
Sbjct: 270 LKESMGLTQVTTVQEKSIPVLLDGKDALIRSQTGSGKTLAFALPMLHKLQEIRPKITRSD 329
Query: 466 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
GI ++I+LPTRELALQT E+F KL KS+ W+VP +L GGEK KS+KAR+RKGI+IL+ TP
Sbjct: 330 GILSLIVLPTRELALQTYEVFNKLVKSYNWLVPGYLGGGEKRKSKKARLRKGITILIGTP 389
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ-------KPQF- 577
GRL+DH +HT+ L KV LV+DEADR+LD GYE+D++ LE L + KP +
Sbjct: 390 GRLIDHIQHTKALNLEKVSWLVIDEADRLLDMGYEKDVSTLLETLDRHDEDSSLLKPDYL 449
Query: 578 --------------------QSILLSATLTPAVQRLAGMTLQNPIQIDAAD--------- 608
Q+ILLSATL+P VQ+LAG++L++P +DA+D
Sbjct: 450 KTDEEKEEKEKEKEPKRHHRQTILLSATLSPKVQKLAGLSLRDPTFVDASDKNSSCSDHV 509
Query: 609 ---STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
S+D+ TD++V+P+SL Q +IVTPPKL+LV+L SFI+ N ++ KML+F+
Sbjct: 510 PLVSSDMGAETDAMVLPESLIQKYIVTPPKLKLVSLTSFII---WNSKVSQQKKMLIFVG 566
Query: 666 TQDMADYHTELLSTVLG------------------------ENIAFFKLHGSMSQSERTE 701
TQDM DY+TELLSTV G +I FKLHG+M QS+R E
Sbjct: 567 TQDMVDYYTELLSTVFGGVTSKNDDDGNDTKSNEGLLNFPTSDIELFKLHGNMKQSDRME 626
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
VFKTFR GVL+CTDVAARGLDLP VDW+VQ+T P S +DYVHRVGRTAR G GSS+
Sbjct: 627 VFKTFRKSNMGVLLCTDVAARGLDLPEVDWVVQFTGPISVSDYVHRVGRTARSGQSGSSI 686
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL--LSVKMEGDLSRLADGNVETAATALQ 819
+FL P+E+ + +L+N +IR+ E K++ CLQ+L ++ + G R G VE AT LQ
Sbjct: 687 IFLTPNEINFIRKLENCQIRVREEKMETCLQHLAEINTEGGGGGGRRRRGVVEEEATKLQ 746
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
FE VL K L+ ACK Y+SW RFYASY ++++ F+ K +H GH+AKSFALRD PS
Sbjct: 747 SIFEKLVLDNKKLYDLACKAYSSWSRFYASYPRNMKDAFSVKTVHQGHYAKSFALRDTPS 806
Query: 880 VISGIGKPKN 889
VI + KN
Sbjct: 807 VIVNYAREKN 816
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/343 (48%), Positives = 229/343 (66%), Gaps = 48/343 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +TQVTTVQ+ SI +LDG D L+RSQTGSGKTLA+A+P++ KLQE+RPKI+R DGI +
Sbjct: 274 MGLTQVTTVQEKSIPVLLDGKDALIRSQTGSGKTLAFALPMLHKLQEIRPKITRSDGILS 333
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+LPTRELALQT E+F KL KS+ W+VP +L GGEK KS+KAR+RKGI+IL+ TPGRL+
Sbjct: 334 LIVLPTRELALQTYEVFNKLVKSYNWLVPGYLGGGEKRKSKKARLRKGITILIGTPGRLI 393
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +HT+ L KV LV+DEADR+LD GYE+D++ LE L
Sbjct: 394 DHIQHTKALNLEKVSWLVIDEADRLLDMGYEKDVSTLLETLD------------------ 435
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+H E K ++L DE E + + ++ Q++LLSATL+P
Sbjct: 436 ----RHDEDSSLLKPDYLKTDEE-----------KEEKEKEKEPKRHHRQTILLSATLSP 480
Query: 241 AVQRLAGMTLQNPIQIDAAD------------STDIHNTTDSLVIPDSLKQHFIVTPPKL 288
VQ+LAG++L++P +DA+D S+D+ TD++V+P+SL Q +IVTPPKL
Sbjct: 481 KVQKLAGLSLRDPTFVDASDKNSSCSDHVPLVSSDMGAETDAMVLPESLIQKYIVTPPKL 540
Query: 289 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+LV+L SFI+ N ++ KML+F+ TQDM DY+TELLST
Sbjct: 541 KLVSLTSFII---WNSKVSQQKKMLIFVGTQDMVDYYTELLST 580
>gi|193676312|ref|XP_001947247.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Acyrthosiphon pisum]
Length = 642
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 297/599 (49%), Positives = 410/599 (68%), Gaps = 29/599 (4%)
Query: 347 NYEIPKKTEVKSGPISSLFQNNPDI--------PNVPTRRLKPVSEALFAPTSYEEFPGI 398
NY+ + K+G ++S+F+NNP++ V + +LF+ ++Y++ +
Sbjct: 53 NYQKKNNNDRKNGYMTSMFRNNPEVQLPVAILNKQVDIQASNKNRNSLFSTSTYKDLTDL 112
Query: 399 HPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
H M NL + + +T++TTVQ +I + G D +V+S+TGSGKT AYA+P+I+ L ++R
Sbjct: 113 HAHMVANLEQTLGVTKLTTVQSQTIPVLQSGKDAMVQSETGSGKTFAYAVPLIESLHKIR 172
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 518
PK+SR DG+ A+IILPTRELALQT E F KL K +TW+VP TGGEK KSEKAR+RKGI
Sbjct: 173 PKLSRTDGLRALIILPTRELALQTYENFIKLLKPYTWLVPGMFTGGEKRKSEKARMRKGI 232
Query: 519 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF- 577
+IL+ TPGRLLDH ++T+++ F ++ L++DEADR+LD GYE+DI L ++ + + +
Sbjct: 233 TILIGTPGRLLDHAQNTKSISFKSLQWLIIDEADRMLDLGYEKDITSILSVVDEHRDESV 292
Query: 578 --QSILLSATLTPAVQRLAGMTLQNPIQIDAAD--STDIHNTTDSLVIPDSLKQHFIVTP 633
Q+ LLSATL+ VQRLAG++L++P+ IDA+ STD ++ + IPDSL Q++++ P
Sbjct: 293 PRQTALLSATLSEGVQRLAGLSLKDPVYIDASSIGSTD----SECMAIPDSLLQYYVLAP 348
Query: 634 PKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGS 693
PKLRLV L+ +L K Q SK LVFMATQDM D++TELL+TVL + FKLHG+
Sbjct: 349 PKLRLVTLSGVLLQKLQ--KGQISSKTLVFMATQDMVDFYTELLTTVL-TCLTMFKLHGN 405
Query: 694 MSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR 753
M+Q ER EVFK+F++ GVL CTDVA+RGLDLPLVD I+QY AP + TDYVHRVGRTAR
Sbjct: 406 MTQVERMEVFKSFKAANHGVLFCTDVASRGLDLPLVDRIIQYNAPITPTDYVHRVGRTAR 465
Query: 754 VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVET 813
VG +G + LFL P E + +LQ+ I E+K+ CL ++L+++ EG+ + A E
Sbjct: 466 VGQKGEATLFLTPHEAMFIAKLQDHSIVASELKMDKCLTSILTMEFEGEHVKTA----EM 521
Query: 814 AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFA 873
AA LQ FE+AVL+Q LH C + SWVR YASY K R +FNFK HLGH+AKSFA
Sbjct: 522 AANVLQSRFETAVLEQDRLHELGCNAFKSWVRSYASYPKSSREVFNFKDCHLGHYAKSFA 581
Query: 874 LRDAPSVISGIGKPKNKEELKNKKMAINKEKS---FKQRGNFSKKQMLSEFDSGLPQRK 929
+RDAP +I GIGKPK +KN++ I K S FK+R + K SEFDSG+ +K
Sbjct: 582 IRDAPRIIGGIGKPKKDPRMKNQR-KIPKADSGALFKKRKS-DKAISASEFDSGMKAKK 638
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 198/330 (60%), Gaps = 72/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T++TTVQ +I + G D +V+S+TGSGKT AYA+P+I+ L ++RPK+SR DG+ A
Sbjct: 124 LGVTKLTTVQSQTIPVLQSGKDAMVQSETGSGKTFAYAVPLIESLHKIRPKLSRTDGLRA 183
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+IILPTRELALQT E F KL K +TW+VP TGGEK KSEKAR+RKGI+IL+ TPG
Sbjct: 184 LIILPTRELALQTYENFIKLLKPYTWLVPGMFTGGEKRKSEKARMRKGITILIGTPG--- 240
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
R+LD
Sbjct: 241 -----------------------RLLDH-------------------------------- 245
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF---QSVLLSAT 237
++T+++ F ++ L++DEADR+LD GYE+DI L ++ + + + Q+ LLSAT
Sbjct: 246 ---AQNTKSISFKSLQWLIIDEADRMLDLGYEKDITSILSVVDEHRDESVPRQTALLSAT 302
Query: 238 LTPAVQRLAGMTLQNPIQIDAAD--STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
L+ VQRLAG++L++P+ IDA+ STD ++ + IPDSL Q++++ PPKLRLV L+
Sbjct: 303 LSEGVQRLAGLSLKDPVYIDASSIGSTD----SECMAIPDSLLQYYVLAPPKLRLVTLSG 358
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYH 325
+L K Q SK LVFMATQDM D++
Sbjct: 359 VLLQKLQ--KGQISSKTLVFMATQDMVDFY 386
>gi|405952846|gb|EKC20608.1| Putative ATP-dependent RNA helicase DDX31 [Crassostrea gigas]
Length = 713
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 280/611 (45%), Positives = 398/611 (65%), Gaps = 36/611 (5%)
Query: 346 DNYEIPKKTEVKSGP--ISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMK 403
D+ E+P K E ISSLF+ NP+IP+V + +E +F+ +++ +HPFM
Sbjct: 98 DSTEVPHKKERHENKVFISSLFRFNPEIPSVERSVVSKKTEEMFSSKDFKDL-DLHPFMI 156
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
NL E ITQ+TTVQQ +I ++ G DV+V+SQTGSGKTL +A+P++Q LQ + PKISR
Sbjct: 157 TNLEERFQITQMTTVQQRAIPHLMSGRDVMVKSQTGSGKTLTFAVPVVQHLQSLTPKISR 216
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A++I+PTREL +Q E F +L F W+VP L GGEK KSEKAR+RKG++ILV
Sbjct: 217 MDGVLALVIVPTRELVIQCFETFKRLVNPFQWVVPGCLMGGEKRKSEKARLRKGMNILVC 276
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T +L SKV+ LVLDEADR+LD GYE+D+ E + L + + Q++LLS
Sbjct: 277 TPGRLLDHIRNTNSLSLSKVKWLVLDEADRLLDLGYEKDVGEIISALDTESHR-QTVLLS 335
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIH----------NTTDSLVIPDSLKQHFIVTP 633
ATL+ V+RLAGM+L +P++ID +++ + + ++ V+P+ L+Q F++TP
Sbjct: 336 ATLSEGVERLAGMSLTDPLRIDVSNAEEENSQSNSESSKTQKNENFVVPEKLRQSFVITP 395
Query: 634 PKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG----------- 682
KLRLV L +FIL K + + KM+VF++TQD ++H +L+ + G
Sbjct: 396 CKLRLVTLTAFILLKMKMMT--SPGKMVVFLSTQDSVEFHYKLMKHLFGGEEAEDNPNLA 453
Query: 683 --ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
++ FFKLHG M Q ERT+V++ F S K+GVL CT+VA+RGLDLP V WIVQYT P +
Sbjct: 454 EEGDVDFFKLHGEMPQKERTKVYQEFSSAKTGVLFCTNVASRGLDLPDVRWIVQYTTPGA 513
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL----S 796
DYVHRVGRTARVG +G +LLF++P+EV+ ++ L I +EEI + D L+ L+
Sbjct: 514 VQDYVHRVGRTARVGKQGHALLFIMPAEVEYLKSLSGHGISMEEINMADILKTLIIAVQD 573
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ + D R+ E AT +Q FE+ V++ K + A K + S+VR YA+Y DL+
Sbjct: 574 MVSDSDRKRMPPKTYEECATYIQNCFENFVVEDKEMSEMAKKAFQSFVRAYATYPSDLKT 633
Query: 857 IFNFKQIHLGHFAKSFALRDAPSVISGI-GKPKNKEELKNKKM-AINKEKSFKQRGNFSK 914
IF+ + +HLGH AKSF LR+APS I+ GKPK + K + EKS + +FS
Sbjct: 634 IFHVRNLHLGHLAKSFGLREAPSNINDKRGKPKTFSKKKQSRQDRFGSEKSGFKTPSFS- 692
Query: 915 KQMLSEFDSGL 925
Q +SEF SGL
Sbjct: 693 SQAISEFSSGL 703
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 198/337 (58%), Gaps = 74/337 (21%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
ITQ+TTVQQ +I ++ G DV+V+SQTGSGKTL +A+P++Q LQ + PKISR DG+ A++
Sbjct: 165 ITQMTTVQQRAIPHLMSGRDVMVKSQTGSGKTLTFAVPVVQHLQSLTPKISRMDGVLALV 224
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I+PTREL +Q E F +L F W+VP L GGEK KSEKAR+RKG++ILV TPGRLLDH
Sbjct: 225 IVPTRELVIQCFETFKRLVNPFQWVVPGCLMGGEKRKSEKARLRKGMNILVCTPGRLLDH 284
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
++T +L SKV+ LVLDEADR+LD GYE+D+ E + L + + Q++LLSATL+
Sbjct: 285 IRNTNSLSLSKVKWLVLDEADRLLDLGYEKDVGEIISALDTESHR-QTVLLSATLS---- 339
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
+G ER L +LT
Sbjct: 340 --------------------------EGVER-------------------LAGMSLT--- 351
Query: 243 QRLAGMTLQNPIQIDAADSTDIH----------NTTDSLVIPDSLKQHFIVTPPKLRLVA 292
+P++ID +++ + + ++ V+P+ L+Q F++TP KLRLV
Sbjct: 352 ---------DPLRIDVSNAEEENSQSNSESSKTQKNENFVVPEKLRQSFVITPCKLRLVT 402
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
L +FIL K + + KM+VF++TQD ++H +L+
Sbjct: 403 LTAFILLKMKMMT--SPGKMVVFLSTQDSVEFHYKLM 437
>gi|321460070|gb|EFX71116.1| hypothetical protein DAPPUDRAFT_309224 [Daphnia pulex]
Length = 757
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/595 (45%), Positives = 377/595 (63%), Gaps = 42/595 (7%)
Query: 358 SGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTT 417
+G ISSLF NP+IP V ++ E +F+ S+ IH ++ L + +N+ Q+T
Sbjct: 154 TGIISSLFFKNPEIPEVTKDHVEATEENVFSSQSFSAL-KIHKYLITTLEKDLNLKQMTE 212
Query: 418 VQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRE 477
Q +I +LD D LV+SQTGSGKTLAYAIPI++ + PKI R G++A++I+PTRE
Sbjct: 213 AQSRTIPILLDKKDALVKSQTGSGKTLAYAIPIVESIT---PKIDRTSGVFALVIVPTRE 269
Query: 478 LALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTET 537
L LQT FTK+ K+FTW+VP +L GGEK KSEKARIRKG++IL++TPGRLLDH T
Sbjct: 270 LVLQTYTWFTKILKAFTWVVPGYLIGGEKKKSEKARIRKGMNILISTPGRLLDHLSSTRN 329
Query: 538 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ------KPQFQSILLSATLTPAVQ 591
L ++ LV+DEADR+LD GYE+D+A L I+++ + Q++++SATL+ V+
Sbjct: 330 LNLGRLHWLVMDEADRLLDMGYEKDVARILSIVQEHFVKEGCIGRRQNVMVSATLSKGVE 389
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
+LAG+TL +P I ++ D D LV P +LKQ +I+ PPKLRL LA+FIL KC
Sbjct: 390 KLAGLTLTDPEYIKLSE--DDSENQDQLVTPTNLKQWYIIVPPKLRLATLAAFILWKC-- 445
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGE-----NIAFFKLHGSMSQSERTEVFKTF 706
E K+L+FM TQD DYH EL + VL + +I+F+KLHGSM Q +RT +FK F
Sbjct: 446 -TISTEKKVLIFMTTQDSVDYHAELFNRVLAKREDRTSISFYKLHGSMPQKDRTAIFKEF 504
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
R SGVL+CTDVAARGLDL +DWIVQY P ++ +YVHRVGRTARVG G +++FL P
Sbjct: 505 RDTDSGVLLCTDVAARGLDLSAIDWIVQYNPPVTAEEYVHRVGRTARVGKCGQAIIFLAP 564
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E V L NR I + E L+ L + S+ +E AAT++Q+ FE V
Sbjct: 565 PETDFVHRLANRGISVVEKNPDAILKTLTN-----SWSKTTQ-TMEQAATSIQLCFEECV 618
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
++ ++ A KGY S+VR YA+ KD+R +FNF+ +HLGH+AKSFALRD P+ I+ G+
Sbjct: 619 IESYNVYEMATKGYVSFVRSYAALPKDVRDVFNFQSLHLGHYAKSFALRDPPAQINTNGR 678
Query: 887 ---------PKNKEELKNKKM-------AINKEKSFKQRGNFSKKQMLSEFDSGL 925
P N +N + A+ E + Q + ++ MLSE+ SGL
Sbjct: 679 MGQRNDRIQPFNTARQRNPALLKRAAAQALGSEGTQHQPNFYERQAMLSEYSSGL 733
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 188/336 (55%), Gaps = 75/336 (22%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+ Q+T Q +I +LD D LV+SQTGSGKTLAYAIPI++ + PKI R G++A
Sbjct: 205 LNLKQMTEAQSRTIPILLDKKDALVKSQTGSGKTLAYAIPIVESIT---PKIDRTSGVFA 261
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL LQT FTK+ K+FTW+VP +L GGEK KSEKARIRKG+
Sbjct: 262 LVIVPTRELVLQTYTWFTKILKAFTWVVPGYLIGGEKKKSEKARIRKGM----------- 310
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
++++ R+LD LS+T
Sbjct: 311 ---------------NILISTPGRLLDH------------------------LSST---- 327
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ------KPQFQSVLL 234
L ++ LV+DEADR+LD GYE+D+A L I+++ + Q+V++
Sbjct: 328 -------RNLNLGRLHWLVMDEADRLLDMGYEKDVARILSIVQEHFVKEGCIGRRQNVMV 380
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATL+ V++LAG+TL +P I ++ D D LV P +LKQ +I+ PPKLRL LA
Sbjct: 381 SATLSKGVEKLAGLTLTDPEYIKLSE--DDSENQDQLVTPTNLKQWYIIVPPKLRLATLA 438
Query: 295 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+FIL KC E K+L+FM TQD DYH EL +
Sbjct: 439 AFILWKC---TISTEKKVLIFMTTQDSVDYHAELFN 471
>gi|432876075|ref|XP_004072964.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like [Oryzias
latipes]
Length = 761
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/607 (44%), Positives = 385/607 (63%), Gaps = 50/607 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF++NPDIP++ + + E +F S+ E +HP + LN+ +N++ +T+VQ+
Sbjct: 137 SSLFKHNPDIPDIHRAAVCQLKEKIFTSDSFSEL-DLHPHLVATLNKVLNVSTLTSVQKQ 195
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I + G D LVRSQTGSGKTL+YA+P++Q LQ ++PK+SR DG A++I+PTRELA+Q
Sbjct: 196 TIPVLQSGRDALVRSQTGSGKTLSYAVPLVQSLQSIQPKVSRSDGPLALVIVPTRELAVQ 255
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
T +IF KL K FTWIVP L GGEK K+EKARIRKGI+ILV+TPGRL+DH KHT ++ FS
Sbjct: 256 TFQIFQKLLKPFTWIVPGVLMGGEKRKAEKARIRKGINILVSTPGRLVDHIKHTLSIAFS 315
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
V LVLDEADR LD G+++D+ L L P Q++LLSATLT V RLA + L++P
Sbjct: 316 AVRWLVLDEADRTLDLGFDKDLTVILNSLNSTGPARQNVLLSATLTLGVSRLADVCLKDP 375
Query: 602 IQIDAA---------------DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
+ I + T+ NT++S +P++L+Q +V P K+RLV LA+F+L
Sbjct: 376 VSIQVSGPSSSSDHTGSSHVTSDTEAANTSESFAVPEALRQFAVVVPSKIRLVCLAAFVL 435
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-----NIAFFKLHGSMSQSERTE 701
KC++ +K++VF+++ + ++ L ++VL ++F +LHG+M Q ER+E
Sbjct: 436 DKCKD------NKVIVFVSSCEAVEFLHSLFTSVLTRPAAYPRLSFQRLHGNMKQEERSE 489
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
VF+ F + +SGVL+CTDVAARGLDLPLV WIVQYT PSS+ +YVHRVGRTAR+G GSSL
Sbjct: 490 VFQLFSASQSGVLLCTDVAARGLDLPLVTWIVQYTPPSSAAEYVHRVGRTARIGGRGSSL 549
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL---SVKMEGDL-----SRLADGNVET 813
LFL P+E + EL N I + E+KL++ L L+ + + G S+ + V
Sbjct: 550 LFLTPAETAFISELANHNISLSEMKLQEILSCLMLDDTYRGRGKYYSKTSSKALEQEVRE 609
Query: 814 AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFA 873
AT LQ FE+ V +A K S++R Y +Y L+HIF+ + +HLGH AKSF
Sbjct: 610 RATVLQTEFENFVHSDAQSLQAAKKALQSYLRAYTTYPAHLKHIFHIRFLHLGHAAKSFG 669
Query: 874 LRDAPSVI-SGIGKPKNKEELKNKKMA-----------INKEKSFKQR---GNFSKKQML 918
LRDAP + S +G + KNK +A + K+ + K+R G +
Sbjct: 670 LRDAPGGLSSALGSKGPGTKGKNKNVARKQGKSPVPNRVQKQITGKKRFFSGQREAGMLR 729
Query: 919 SEFDSGL 925
SEF +GL
Sbjct: 730 SEFSNGL 736
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 198/331 (59%), Gaps = 52/331 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N++ +T+VQ+ +I + G D LVRSQTGSGKTL+YA+P++Q LQ ++PK+SR DG A
Sbjct: 184 LNVSTLTSVQKQTIPVLQSGRDALVRSQTGSGKTLSYAVPLVQSLQSIQPKVSRSDGPLA 243
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTRELA+QT +IF KL K FTWIVP L GGEK K+EKARIRKGI+ILV+TPGRL+
Sbjct: 244 LVIVPTRELAVQTFQIFQKLLKPFTWIVPGVLMGGEKRKAEKARIRKGINILVSTPGRLV 303
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH KHT ++ FS V LVLDEADR LD G+++D+ L L P Q++LLSATL
Sbjct: 304 DHIKHTLSIAFSAVRWLVLDEADRTLDLGFDKDLTVILNSLNSTGPARQNVLLSATL--- 360
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
TL S++ + L + I G P
Sbjct: 361 --------TLGVSRLADVCLKDPVSIQVSG-----------------------------P 383
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ + +AA++ ++S +P++L+Q +V P K+RLV LA+F+L K
Sbjct: 384 SSSSDHTGSSHVTSDTEAANT------SESFAVPEALRQFAVVVPSKIRLVCLAAFVLDK 437
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLST 331
C++ +K++VF+++ + ++ L ++
Sbjct: 438 CKD------NKVIVFVSSCEAVEFLHSLFTS 462
>gi|291411436|ref|XP_002721995.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Oryctolagus
cuniculus]
Length = 708
Score = 501 bits (1289), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/624 (44%), Positives = 380/624 (60%), Gaps = 57/624 (9%)
Query: 351 PKKTEVKSG----------PISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHP 400
P+K V +G SSLF+NNP+IP +P R++ E +F P +++E G+HP
Sbjct: 63 PRKCSVSAGDGSREEKPCIKTSSLFKNNPEIPELPRPRVEQACETVFTPDAFQEL-GLHP 121
Query: 401 FMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK 460
+ +N ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M K
Sbjct: 122 HLISTINTVFKMSSMTSVQKRSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMPSK 181
Query: 461 ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISI 520
I R DG YA++I+PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+I
Sbjct: 182 IQRSDGPYALVIVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINI 241
Query: 521 LVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSI 580
L++TPGRL+DH + T+ + FS++ LVLDEADRILD G+E+DI L + + + Q++
Sbjct: 242 LISTPGRLVDHIRSTKNIHFSRICWLVLDEADRILDLGFEKDITVILNAVNAECRKRQNV 301
Query: 581 LLSATLTPAVQRLAGMTLQNPIQIDAAD-STDIHN----------------TTDSLVIPD 623
LLSATLT V RLA ++L NP+ + D S D N D IP+
Sbjct: 302 LLSATLTEGVTRLADISLHNPVSVSVLDESRDQCNPEGKAVQEVSPPQPGSRPDGFAIPE 361
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
SL QH + P KLRLV LA+FIL KC+ +++ KM+VF ++ ++ ++H L L
Sbjct: 362 SLDQHVTLVPSKLRLVCLAAFILQKCKF---EKDQKMIVFFSSCELVEFHYHLFLQTLAS 418
Query: 684 N---------------IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
+ F +LHG+M Q ERT VF+ F ++GVL+CTDVAARGLDLP
Sbjct: 419 GSGARASGPSPSACTRLRFLRLHGNMEQEERTAVFQEFARSRTGVLLCTDVAARGLDLPQ 478
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK 788
V WIVQY APSS +Y+HRVGRTAR+G GSSLL L PSE + V L + +I + E+K++
Sbjct: 479 VTWIVQYNAPSSPAEYIHRVGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVCEVKME 538
Query: 789 DCLQ-----NLLSVKMEGDLSRLADGNVET--AATALQMSFESAVLQQKILHTSACKGYT 841
D L + + G+ A G ET AT LQ FE V + + A K
Sbjct: 539 DILSVLTRDDCFQGRGRGNQKPHAGGPQETRARATVLQTVFEDYVHSSERTLSWAKKALQ 598
Query: 842 SWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN 901
S++R YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S K + + K+ A+
Sbjct: 599 SFIRAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPQNLSVSAGKKRRAGM--KRPALG 656
Query: 902 KEKSFKQRGNFSKKQMLSEFDSGL 925
KE K+R + + SE+ SGL
Sbjct: 657 KETQSKRR--RLAEILRSEYSSGL 678
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 195/329 (59%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 131 FKMSSMTSVQKRSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMPSKIQRSDGPYA 190
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 191 LVIVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 250
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH + T+ + FS++ LVLDEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 251 DHIRSTKNIHFSRICWLVLDEADRILDLGFEKDITVILNAVNAECRKRQNVLLSATLTEG 310
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ + + V VLDE+ RD + P+ ++V + P
Sbjct: 311 V--TRLADISLHNPVSVSVLDES---------RD---------QCNPEGKAVQEVSPPQP 350
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ D IP+SL QH + P KLRLV LA+FIL K
Sbjct: 351 G------------------------SRPDGFAIPESLDQHVTLVPSKLRLVCLAAFILQK 386
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 387 CKF---EKDQKMIVFFSSCELVEFHYHLF 412
>gi|126297926|ref|XP_001370951.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Monodelphis
domestica]
Length = 730
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 268/604 (44%), Positives = 379/604 (62%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F S+ E G+HP + +N + + +T+VQ+
Sbjct: 114 SSLFKNNPEIPEIHRATVKQVREKVFTSDSFHEL-GLHPHLISTINSVLKMASMTSVQKQ 172
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ +I R DG YA++++PTRELALQ
Sbjct: 173 SIPSLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSRIQRSDGPYALVLVPTRELALQ 232
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 233 SFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 292
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+++ L++DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 293 RIQWLIIDEADRILDLGFEKDITVILNAINAECEKRQNVLLSATLTEGVTRLADISLHNP 352
Query: 602 IQIDAADSTDIHNTT-----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I +D T T D +P+ L+QH + P KL+LV LA+F
Sbjct: 353 VSISVSDETCDQRTKGYKIAGESGPLRTSAEPDGFAVPEKLQQHVTLVPSKLKLVTLAAF 412
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
ILG+C+ +++ K++VF ++ ++ +++ L L T+LG + A F +
Sbjct: 413 ILGRCEF---EKDHKLIVFFSSCELVEFYYHLFLQTLLGSSTAPASGQSPSASSRLKFLR 469
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q ERT VF+ F KSG+L+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 470 LHGNMEQEERTAVFQEFSLSKSGILLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 529
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L L + G+
Sbjct: 530 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILSILATDDRFKARRWGNKK 589
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+ G + AT LQ +FE V + A K S++R YA+Y KDL+HIF+ +
Sbjct: 590 SRSVGPQEIRERATVLQTAFEDYVHASAERVSWAKKALQSFIRAYATYPKDLKHIFHVRS 649
Query: 863 IHLGHFAKSFALRDAPSVISG-IGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEF 921
+HLGH AKSF LRDAP ++ +G NK + K K+ ++K+ K R + + SE+
Sbjct: 650 LHLGHVAKSFGLRDAPQNLNASLG---NKRKSKPKRPDLHKKTQSKHR---LAEILRSEY 703
Query: 922 DSGL 925
SG+
Sbjct: 704 SSGM 707
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 196/332 (59%), Gaps = 53/332 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ +I R DG YA
Sbjct: 161 LKMASMTSVQKQSIPSLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSRIQRSDGPYA 220
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 221 LVLVPTRELALQSFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 280
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F +++ L++DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 281 DHIKSTKNIHFRRIQWLIIDEADRILDLGFEKDITVILNAINAECEKRQNVLLSATLTEG 340
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQ---GYERDIAEFLEILKKQKPQFQSVLLSAT 237
T S + + +D DQ GY
Sbjct: 341 V-----TRLADISLHNPVSISVSDETCDQRTKGY-------------------------- 369
Query: 238 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
++AG + P++ A D +P+ L+QH + P KL+LV LA+FI
Sbjct: 370 ------KIAGES--GPLRTSA--------EPDGFAVPEKLQQHVTLVPSKLKLVTLAAFI 413
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
LG+C+ +++ K++VF ++ ++ +++ L
Sbjct: 414 LGRCEF---EKDHKLIVFFSSCELVEFYYHLF 442
>gi|395506322|ref|XP_003757483.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Sarcophilus
harrisii]
Length = 715
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/556 (46%), Positives = 358/556 (64%), Gaps = 43/556 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F S+ E G+HP + +N + ++ +T+VQ+
Sbjct: 99 SSLFKNNPEIPEIHRAMVKQVQEKVFTSDSFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 157
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ ++ R DG YA++++PTRELALQ
Sbjct: 158 SIPSLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKLRVQRSDGPYALVLVPTRELALQ 217
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 218 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 277
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+++ L++DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 278 RIQWLIIDEADRILDLGFEKDITVILNAINSECEKRQNVLLSATLTEGVARLADISLHNP 337
Query: 602 IQIDAADST-------------DIHNTT----DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I +D T D H T DS +P+ L+QH + P KL+LV LA+F
Sbjct: 338 VSISVSDETCDQHIKGCKAARGDGHLQTSAEPDSFAVPEKLQQHVTLVPSKLKLVTLAAF 397
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
ILGKC+ + K++VF ++ ++ +++ L L T+L ++A F +
Sbjct: 398 ILGKCEF---ETNQKLIVFFSSCELVEFYYHLFLQTLLSSSVAPASGQSPSASSRLKFLR 454
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q ERT VF+ F KSG+L+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 455 LHGNMEQEERTAVFQEFSQSKSGILLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 514
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L L + G+
Sbjct: 515 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILSILAMDDRFKGRRWGNKK 574
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+ G + AT LQ +FE V + A K S++R YA+Y KDL+HIF+ +
Sbjct: 575 SRSVGPQEIRERATVLQTAFEDYVHASAEKVSWAKKALQSFIRAYATYPKDLKHIFHVRS 634
Query: 863 IHLGHFAKSFALRDAP 878
+HLGH AKSF LRDAP
Sbjct: 635 LHLGHVAKSFGLRDAP 650
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 138/178 (77%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ ++ R DG YA
Sbjct: 146 LKMSSMTSVQKQSIPSLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKLRVQRSDGPYA 205
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 206 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 265
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K T+ + FS+++ L++DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 266 DHIKSTKNIHFSRIQWLIIDEADRILDLGFEKDITVILNAINSECEKRQNVLLSATLT 323
>gi|348536150|ref|XP_003455560.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Oreochromis niloticus]
Length = 734
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 277/603 (45%), Positives = 376/603 (62%), Gaps = 48/603 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF++NPDI ++ + + E +F + + +HP + LN+ MNI+ +T+VQ+
Sbjct: 117 SSLFKHNPDISDIHRPAVAQLKEKIFTSDLFSDL-DLHPHLVATLNKVMNISTLTSVQKQ 175
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I +L G D +VRSQTGSGKTL+YA+P++Q LQ ++PK+SR DG A++I+PTRELA Q
Sbjct: 176 TIPALLAGRDAVVRSQTGSGKTLSYAVPLVQSLQSIQPKVSRSDGPLALVIVPTRELAQQ 235
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
T + F KL K FTWIVP L GGEK K+EKARIRKGI+ILV+TPGRL+DH KHT ++ FS
Sbjct: 236 TFQTFQKLLKPFTWIVPGVLMGGEKRKAEKARIRKGINILVSTPGRLVDHIKHTLSIAFS 295
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
V LVLDEADR LD G+E+D+ L L P Q++LLSATLT V RLA + L NP
Sbjct: 296 AVRWLVLDEADRTLDLGFEKDLTVILNSLNSTGPARQNVLLSATLTNGVTRLADVCLNNP 355
Query: 602 --IQIDAADSTDIHNT------------TDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
I + +A S+D+ T ++S +P++LKQ +V P K+RLV LA+FIL
Sbjct: 356 VSIHVSSAPSSDLTTTSVVTCDPEAASQSESFAVPEALKQFVVVVPSKVRLVCLAAFILD 415
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA-------FFKLHGSMSQSERT 700
KC+ D K++VF+++ + ++ L VL A F +LHG+M Q ERT
Sbjct: 416 KCKFSQND---KLIVFISSCEAVEFLHSLFIAVLSRPSANHKPPLMFLRLHGNMKQEERT 472
Query: 701 EVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSS 760
E F+ F + +SGVL+CTDVAARGLDLP V WI+QYT P+++ +YVHRVGRTAR+G GSS
Sbjct: 473 EAFQQFSASQSGVLLCTDVAARGLDLPQVTWIIQYTPPTAAAEYVHRVGRTARIGARGSS 532
Query: 761 LLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL---SVKMEGDL-----SRLADGNVE 812
LLFL P+E + EL N I + E+KL+D L +L+ K G S+ + V
Sbjct: 533 LLFLTPAETAFITELANHNISLSEMKLQDILSSLMFDDVYKGRGKYHSKSSSKALEQEVR 592
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
AT LQ FE+ V +A K S++R Y +Y L+HIF+ + +HLGH AKSF
Sbjct: 593 ERATVLQTEFENFVHADARSLQAAKKALQSFLRAYTTYPAHLKHIFHIRSLHLGHAAKSF 652
Query: 873 ALRDAPSVISGIG---------KPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEFD 922
LRDAP +S K +N+ +N+K K K F QR + QM SEF
Sbjct: 653 GLRDAPQGLSAAAGPGASGGHRKNQNQARKQNQKKLTGK-KRFGQR----EVQMFHSEFS 707
Query: 923 SGL 925
SGL
Sbjct: 708 SGL 710
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 137/178 (76%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MNI+ +T+VQ+ +I +L G D +VRSQTGSGKTL+YA+P++Q LQ ++PK+SR DG A
Sbjct: 164 MNISTLTSVQKQTIPALLAGRDAVVRSQTGSGKTLSYAVPLVQSLQSIQPKVSRSDGPLA 223
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTRELA QT + F KL K FTWIVP L GGEK K+EKARIRKGI+ILV+TPGRL+
Sbjct: 224 LVIVPTRELAQQTFQTFQKLLKPFTWIVPGVLMGGEKRKAEKARIRKGINILVSTPGRLV 283
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH KHT ++ FS V LVLDEADR LD G+E+D+ L L P Q++LLSATLT
Sbjct: 284 DHIKHTLSIAFSAVRWLVLDEADRTLDLGFEKDLTVILNSLNSTGPARQNVLLSATLT 341
>gi|403289657|ref|XP_003935962.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX31 [Saimiri boliviensis boliviensis]
Length = 857
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 376/604 (62%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 208 SSLFKNNPDIPELHRSVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 266
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R+DG Y ++++PTRELALQ
Sbjct: 267 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRRDGPYVLVLVPTRELALQ 326
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 327 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 386
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 387 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 446
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SL+QH V P KLRLV LA+F
Sbjct: 447 VSISVLDESHDQLNPKDKVVQEVCPPPAGDELDSFAIPESLEQHVTVVPSKLRLVCLAAF 506
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 507 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASTRLKFLR 563
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 564 LHGNMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 623
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 624 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 683
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S++R YA+Y ++L+HIF+ +
Sbjct: 684 SRAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIRAYATYPRELKHIFHVRS 743
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K L K+ ++K K + S ++L SE+
Sbjct: 744 LHLGHVAKSFGLRDAPRNLSALTRKKRKANL--KRPGLHK----KTQSKHSLAEILRSEY 797
Query: 922 DSGL 925
SG+
Sbjct: 798 SSGM 801
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 195/329 (59%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R+DG Y
Sbjct: 255 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRRDGPYV 314
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 315 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 374
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 375 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 434
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ + V VLDE+ DQ +D V+ P
Sbjct: 435 V--TRLADISLHDPVSISVLDESH---DQLNPKD----------------KVVQEVCPPP 473
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A L DS IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 474 AGDEL-----------------------DSFAIPESLEQHVTVVPSKLRLVCLAAFILQK 510
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 511 CKF---EKDQKMVVFFSSCELVEFHYSLF 536
>gi|402896218|ref|XP_003911203.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Papio anubis]
Length = 722
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/595 (45%), Positives = 373/595 (62%), Gaps = 46/595 (7%)
Query: 339 KEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGI 398
K++++ P + ++ +K+ SSLF+NNPDIP + +K V E +F ++ E G+
Sbjct: 53 KKHSVSPSDRNQEERPCIKT---SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GL 108
Query: 399 HPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
P + +N + ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+
Sbjct: 109 QPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMK 168
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 518
KI R DG YA++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI
Sbjct: 169 SKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGI 228
Query: 519 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 578
+IL++TPGRL+DH K T+ + FS++ LV DEADRILD G+ERDI L + + + Q
Sbjct: 229 NILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFERDITVILNAVNAECQKRQ 288
Query: 579 SILLSATLTPAVQRLAGMTLQNPIQIDAAD-STDIHNTTDSLV----------------I 621
++LLSATLT V RLAG++L +P+ I D S D N D V I
Sbjct: 289 NVLLSATLTEGVTRLAGISLHDPVSISVLDKSHDQLNPKDKAVREVCPPPAGDELDNFAI 348
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTV 680
P+SL+QH V P KLRLV LA+FIL KC+ +++ KM+VF ++ ++ ++H L L T+
Sbjct: 349 PESLEQHVTVVPSKLRLVCLAAFILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTL 405
Query: 681 LGENIA--------------FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
L + A F +LHG+M Q ERT VF+ F + GVL+CTDVAARGLDL
Sbjct: 406 LSSSGAPASGQLPSASTRLKFLRLHGNMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDL 465
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
P V WIVQY APSS +Y+HR+GRTAR+G GSSLL L PSE + V L + +I + E+K
Sbjct: 466 PQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEMK 525
Query: 787 LKDCL-----QNLLSVKMEGDLSRLADG--NVETAATALQMSFESAVLQQKILHTSACKG 839
++D L + K G A G + AT LQ FE V + + A K
Sbjct: 526 MEDILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKA 585
Query: 840 YTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK 894
S+++ YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K LK
Sbjct: 586 LQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHLK 640
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 120 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYA 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 180 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+ERDI L + + + Q++LLSATLT
Sbjct: 240 DHIKSTKNIHFSRLRWLVFDEADRILDLGFERDITVILNAVNAECQKRQNVLLSATLTEG 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 300 V-----TRLAGISLHDPVSISVLDKSHDQLNPKDKA----------------VREVCPPP 338
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A L D+ IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 339 AGDEL-----------------------DNFAIPESLEQHVTVVPSKLRLVCLAAFILQK 375
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 376 CKF---EKDQKMVVFFSSCELVEFHYSLF 401
>gi|338720351|ref|XP_001499277.3| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Equus
caballus]
Length = 824
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/603 (45%), Positives = 375/603 (62%), Gaps = 48/603 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F ++ E +HP + +N + ++ +T++Q+
Sbjct: 190 SSLFKNNPEIPELHRPVVKQVQEKVFTSDAFHEL-DLHPHLISTINTVLKMSSMTSIQKQ 248
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ ++ KI R DG YA++++PTRELALQ
Sbjct: 249 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAVKAKIQRSDGPYALVLVPTRELALQ 308
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T L FS
Sbjct: 309 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTGNLHFS 368
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+V L+LDEADRILD G+E+DI L + + Q++LLSATLT V RLAG++L NP
Sbjct: 369 RVRWLILDEADRILDLGFEKDITVILNAVNAECQSRQTVLLSATLTEGVTRLAGISLHNP 428
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SL QH + P KLRLV+LA+F
Sbjct: 429 VSISVLDESHDQSNPKGKAVLEVSPPRTSDELDSFAIPESLDQHVTLVPSKLRLVSLAAF 488
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 489 ILQKCKF---EKDQKMIVFFSSCELVEFHYNLFLQTLLSSSGAPAPGQLPSASTRLKFLR 545
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q ERT VF+ F K+GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 546 LHGNMEQEERTAVFQEFSHSKTGVLLCTDVAARGLDLPQVKWIVQYNAPSSPAEYIHRIG 605
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L L + G
Sbjct: 606 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILSVLTRDDCFKGRRWGSQK 665
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S++R YA+Y ++L+H+F+ +
Sbjct: 666 SRAVGPQEIRERATVLQTVFEDYVHSNERRVSGAKKALQSFIRAYAAYPRELKHVFHVRS 725
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+HLGH AKSF LRDAP +S K K L K+ ++K+ KQR + + SE+
Sbjct: 726 LHLGHVAKSFGLRDAPRNLSVSAVTKRKANL--KRPDLHKKTQSKQR---LAEILRSEYS 780
Query: 923 SGL 925
SG+
Sbjct: 781 SGM 783
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 197/329 (59%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T++Q+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ ++ KI R DG YA
Sbjct: 237 LKMSSMTSIQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAVKAKIQRSDGPYA 296
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 297 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 356
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T L FS+V L+LDEADRILD G+E+DI L + + Q++LLSATLT
Sbjct: 357 DHIKSTGNLHFSRVRWLILDEADRILDLGFEKDITVILNAVNAECQSRQTVLLSATLTEG 416
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ V VLDE+ DQ P+ ++VL
Sbjct: 417 VTRLAGISL--HNPVSISVLDESH---DQS---------------NPKGKAVL------- 449
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
++ ++D DS IP+SL QH + P KLRLV+LA+FIL K
Sbjct: 450 --------------EVSPPRTSD---ELDSFAIPESLDQHVTLVPSKLRLVSLAAFILQK 492
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 493 CKF---EKDQKMIVFFSSCELVEFHYNLF 518
>gi|301613462|ref|XP_002936241.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like [Xenopus
(Silurana) tropicalis]
Length = 695
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/585 (45%), Positives = 379/585 (64%), Gaps = 61/585 (10%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP++P++ +K + E +F+ S+ + G+HP + +N MN+T T+VQ+
Sbjct: 104 SSLFKNNPEVPDIDRPAVKQLKEKVFSADSFSDL-GLHPHLVSTINTVMNMTNTTSVQKQ 162
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I +L G DVLVRSQTGSGKT+AY +P++Q LQ + PKI R DG YA++++PTRELALQ
Sbjct: 163 TIPALLAGRDVLVRSQTGSGKTMAYGVPLVQSLQGVTPKIQRSDGPYALVLVPTRELALQ 222
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRLLDH + T+++ F+
Sbjct: 223 SFSTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLLDHIRSTKSIHFT 282
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+ LV+DEADRILD G+E+D+ L L Q Q++LLSATL+P V RLA ++L +P
Sbjct: 283 RARWLVVDEADRILDMGFEKDVTAILNALNSQCQHRQNVLLSATLSPGVARLADISLNDP 342
Query: 602 IQIDAADST---DIHNT----------TDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ + A+ T D H + +P+ L QH +V P KL+LV LA+FILGK
Sbjct: 343 VSVTIAEDTNREDKHGGKPKEDKKDGDSSCFAMPEKLHQHAVVAPSKLKLVTLAAFILGK 402
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVL--GENIA----FFKLHGSMSQSERTEV 702
+ ++ KM+VF + ++ +++ LLS VL G++ F +LHG+M Q ERTEV
Sbjct: 403 WKCA---KKPKMIVFFPSCELVEFYHSLLSKVLTMGDSAMGPDDFLRLHGNMEQEERTEV 459
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F+ F ++G+L+CTDVAARGLDLP V WIVQ++AP+S+ +Y+HRVGRTAR+G +GSSLL
Sbjct: 460 FQQFTHCQAGILLCTDVAARGLDLPQVTWIVQFSAPASAAEYIHRVGRTARLGAQGSSLL 519
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
LIPSE ++ L +I + E+K++D L NLL ME D ++ A ALQ
Sbjct: 520 ILIPSEAAYLQTLAEHKISVSEMKMEDILSNLL---ME-DFLKI------RRAGALQ--- 566
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
S++R YA+Y K+L+HIF+ + +HLGH AKSF LRDAP +S
Sbjct: 567 -------------------SYIRSYATYPKNLKHIFHIRSLHLGHVAKSFGLRDAPHSLS 607
Query: 883 G--IGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGL 925
G P + + K K+ +K++S KQR FS + SE+ SGL
Sbjct: 608 RQLAGSPSKQSKGKPKRADTHKKRS-KQR--FS-DLLRSEYASGL 648
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 196/361 (54%), Gaps = 80/361 (22%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN+T T+VQ+ +I +L G DVLVRSQTGSGKT+AY +P++Q LQ + PKI R DG YA
Sbjct: 151 MNMTNTTSVQKQTIPALLAGRDVLVRSQTGSGKTMAYGVPLVQSLQGVTPKIQRSDGPYA 210
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ KL K FTWIVP L GGEK KSEKAR+RKGI+
Sbjct: 211 LVLVPTRELALQSFSTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGIN---------- 260
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+++ R+LD
Sbjct: 261 ----------------ILISTPGRLLDH-------------------------------- 272
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ T+++ F++ LV+DEADRILD G+E+D+ L L Q Q+VLLSATL+P
Sbjct: 273 ---IRSTKSIHFTRARWLVVDEADRILDMGFEKDVTAILNALNSQCQHRQNVLLSATLSP 329
Query: 241 AVQRLAGMTLQNPIQIDAADST---DIHNT----------TDSLVIPDSLKQHFIVTPPK 287
V RLA ++L +P+ + A+ T D H + +P+ L QH +V P K
Sbjct: 330 GVARLADISLNDPVSVTIAEDTNREDKHGGKPKEDKKDGDSSCFAMPEKLHQHAVVAPSK 389
Query: 288 LRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDN 347
L+LV LA+FILGK + ++ KM+VF + ++ +++ LLS K+ + + + PD+
Sbjct: 390 LKLVTLAAFILGKWKCA---KKPKMIVFFPSCELVEFYHSLLS---KVLTMGDSAMGPDD 443
Query: 348 Y 348
+
Sbjct: 444 F 444
>gi|194380272|dbj|BAG63903.1| unnamed protein product [Homo sapiens]
Length = 722
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 73 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 131
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 132 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 191
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 192 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 251
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 252 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 311
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 312 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 371
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 372 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 428
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 429 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 488
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 489 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 548
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 549 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 608
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 609 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 662
Query: 922 DSGL 925
SG+
Sbjct: 663 SSGM 666
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 120 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 180 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 240 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 300 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 338
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 339 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 375
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 376 CKF---EEDQKMVVFFSSCELVEFHYSLF 401
>gi|351697284|gb|EHB00203.1| Putative ATP-dependent RNA helicase DDX31, partial [Heterocephalus
glaber]
Length = 683
Score = 494 bits (1271), Expect = e-136, Method: Compositional matrix adjust.
Identities = 275/660 (41%), Positives = 402/660 (60%), Gaps = 60/660 (9%)
Query: 313 LVFMATQDMADYHTELLSTKKKIKKL--KEYNIDPDNYEIPKKTEVKSGPISSLFQNNPD 370
+ F++ + ++ T+ K KK K+Y+++ + + +K +K+ SSLF+NNP+
Sbjct: 26 MSFLSAKKTSEKETQRTFKVKSHKKFSPKKYSVNAGDGKQEEKPCIKT---SSLFKNNPE 82
Query: 371 IPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGG 430
IP + +K E +F P ++ E G+HP + +N + ++ +T+VQ+ SI +L G
Sbjct: 83 IPELDRPVVKQAREQVFTPEAFHEL-GLHPHLISTINTVLKVSSMTSVQKQSIPVLLKGR 141
Query: 431 DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC 490
D LVRSQTGSGKTLAY IP++Q LQ ++ KI R DG YA++++PTRELALQ+ + KL
Sbjct: 142 DALVRSQTGSGKTLAYCIPMVQSLQAVKSKIQRSDGPYALVLVPTRELALQSFDTVQKLL 201
Query: 491 KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDE 550
K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS+++ LVLDE
Sbjct: 202 KPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRIQWLVLDE 261
Query: 551 ADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADST 610
ADRILD G+E+DI L + Q + Q++LLSATLT V RLA ++L NP+ I D +
Sbjct: 262 ADRILDLGFEKDITVILNAINTQCHKRQNVLLSATLTEGVTRLADISLHNPVSISVLDKS 321
Query: 611 DIHNTT-----------------DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
+T DS IP+SL+QH + P KLRLV LA+FIL KC+
Sbjct: 322 HDQSTPKGRAGQGVAPPQTSDRLDSFAIPESLEQHVTLVPSKLRLVCLAAFILQKCKF-- 379
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGEN---------------IAFFKLHGSMSQSE 698
+++ KM+VF ++ ++ ++H L L + + F +LHG+M Q E
Sbjct: 380 -EKDQKMIVFFSSCELVEFHYNLFLQTLSSSEGPPTLRQAPSASTRLKFLRLHGNMEQEE 438
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
RT VF+ F ++GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+GRTAR+G G
Sbjct: 439 RTAVFQEFSCSRAGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHG 498
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSV-------KMEGDLS------R 805
SSLL L PSE + V L + +I + E+K++D L ++L++ + E S
Sbjct: 499 SSLLILAPSEAEYVNSLASHKINVSEMKMEDIL-SILTIDDCFKVRRRENQASFIFKSQA 557
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
+ + AT LQ FE V + + A K S++ YA+Y ++L+HIF+ + +HL
Sbjct: 558 VGPQEIRERATVLQTVFEDYVHSSERTVSWAKKALQSFIGAYAAYPRELKHIFHVRSLHL 617
Query: 866 GHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGL 925
GH AKSF LRDAP +S + K +L K++ + K+ +Q + + SE+ SGL
Sbjct: 618 GHVAKSFGLRDAPRNLSVSAVKRRKGKL--KRLDLRKKTQSQQH---LAQVLRSEYSSGL 672
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 198/329 (60%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L G D LVRSQTGSGKTLAY IP++Q LQ ++ KI R DG YA
Sbjct: 121 LKVSSMTSVQKQSIPVLLKGRDALVRSQTGSGKTLAYCIPMVQSLQAVKSKIQRSDGPYA 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 181 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 240
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS+++ LVLDEADRILD G+E+DI L + Q + Q++LLSATLT
Sbjct: 241 DHIKSTKNIHFSRIQWLVLDEADRILDLGFEKDITVILNAINTQCHKRQNVLLSATLT-- 298
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ R+ D ++ + +L K Q TP
Sbjct: 299 --------------------EGVTRLADISLHNPVS--ISVLDKSHDQS---------TP 327
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ AG + P D DS IP+SL+QH + P KLRLV LA+FIL K
Sbjct: 328 KGR--AGQGVAPPQTSD---------RLDSFAIPESLEQHVTLVPSKLRLVCLAAFILQK 376
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 377 CKF---EKDQKMIVFFSSCELVEFHYNLF 402
>gi|119608412|gb|EAW88006.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 31, isoform CRA_a [Homo
sapiens]
Length = 755
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 106 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 164
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 165 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 224
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 225 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 284
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 285 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 344
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 345 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 404
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 405 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 461
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 462 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 521
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 522 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 581
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 582 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 641
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 642 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 695
Query: 922 DSGL 925
SG+
Sbjct: 696 SSGM 699
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 153 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 212
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 213 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 272
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 273 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 332
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 333 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 371
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 372 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 408
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 409 CKF---EEDQKMVVFFSSCELVEFHYSLF 434
>gi|39645219|gb|AAH12726.2| DDX31 protein, partial [Homo sapiens]
Length = 777
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 128 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 186
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 187 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 246
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 247 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 306
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 307 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 366
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 367 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 426
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 427 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 483
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 484 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 543
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 544 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 603
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 604 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 663
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 664 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 717
Query: 922 DSGL 925
SG+
Sbjct: 718 SSGM 721
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 175 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 234
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 235 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 294
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 295 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 354
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 355 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 393
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 394 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 430
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 431 CKF---EEDQKMVVFFSSCELVEFHYSLF 456
>gi|332833188|ref|XP_003312410.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Pan
troglodytes]
gi|397503698|ref|XP_003822456.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 2 [Pan
paniscus]
Length = 722
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 73 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 131
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 132 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 191
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 192 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 251
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 252 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 311
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 312 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLKQHVTVVPSKLRLVCLAAF 371
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 372 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 428
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 429 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 488
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 489 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 548
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 549 SRAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 608
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 609 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 662
Query: 922 DSGL 925
SG+
Sbjct: 663 SSGM 666
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 193/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 120 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 180 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 240 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 300 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 330
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 331 ---------VQEVCPPPAGDE------LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 375
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 376 CKF---EKDQKMVVFFSSCELVEFHYSLF 401
>gi|17505907|ref|NP_073616.6| probable ATP-dependent RNA helicase DDX31 isoform 1 [Homo sapiens]
gi|71153334|sp|Q9H8H2.2|DDX31_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX31; AltName:
Full=DEAD box protein 31; AltName: Full=Helicain
gi|16566550|gb|AAL26549.1|AF427339_1 DEAD/DEXH helicase DDX31 [Homo sapiens]
Length = 851
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EEDQKMVVFFSSCELVEFHYSLF 530
>gi|119608414|gb|EAW88008.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 31, isoform CRA_c [Homo
sapiens]
Length = 851
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EEDQKMVVFFSSCELVEFHYSLF 530
>gi|33340649|gb|AAQ14889.1|AF335568_1 helicain B [Homo sapiens]
Length = 851
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EEDQKMVVFFSSCELVEFHYSLF 530
>gi|426363394|ref|XP_004048825.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 3
[Gorilla gorilla gorilla]
Length = 722
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 274/604 (45%), Positives = 372/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 73 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 131
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 132 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 191
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 192 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 251
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 252 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 311
Query: 602 IQIDAAD-STDIHNTTD----------------SLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N D S IP+SLKQH V P KLRLV LA+F
Sbjct: 312 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELGSFAIPESLKQHVTVVPSKLRLVCLAAF 371
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 372 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 428
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 429 LHGGMEQQERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 488
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 489 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 548
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 549 PHAAGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 608
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 609 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 662
Query: 922 DSGL 925
SG+
Sbjct: 663 SSGM 666
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 120 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 180 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 240 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 300 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 338
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A L S IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 339 AGDELG-----------------------SFAIPESLKQHVTVVPSKLRLVCLAAFILQK 375
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 376 CKF---EKDQKMVVFFSSCELVEFHYSLF 401
>gi|332255431|ref|XP_003276835.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 4
[Nomascus leucogenys]
Length = 722
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 372/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 73 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 131
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 132 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 191
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 192 SFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 251
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 252 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 311
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SL+QH V P KLRLV LA+F
Sbjct: 312 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLEQHVTVVPSKLRLVCLAAF 371
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 372 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASTRLKFLR 428
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHGSM Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY+APSS +Y+HR+G
Sbjct: 429 LHGSMEQEERTAVFQEFSRSRRGVLLCTDVAARGLDLPQVTWIVQYSAPSSPAEYIHRIG 488
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 489 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 548
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 549 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 608
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K LK + K + S ++L SE+
Sbjct: 609 LHLGHVAKSFGLRDAPRNLSALTRRKRKAHLKRPDL------HKKTQSKHSLAEILRSEY 662
Query: 922 DSGL 925
SG+
Sbjct: 663 SSGM 666
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 120 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 180 LVLVPTRELALQSFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 240 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 300 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 330
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 331 ---------VQEVCPPPAGDE------LDSFAIPESLEQHVTVVPSKLRLVCLAAFILQK 375
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 376 CKF---EKDQKMVVFFSSCELVEFHYSLF 401
>gi|296191070|ref|XP_002806581.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX31 [Callithrix jacchus]
Length = 857
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 374/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 208 SSLFKNNPDIPELHRSVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 266
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG Y ++++PTRELALQ
Sbjct: 267 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYVLVLVPTRELALQ 326
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 327 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 386
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 387 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 446
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SL+QH V P KLRLV LA+F
Sbjct: 447 VSISVLDESHDQLNPKDKVVQEVCPPPAGDELDSFAIPESLEQHVTVVPSKLRLVCLAAF 506
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 507 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASTRLKFLR 563
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 564 LHGNMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 623
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 624 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGTQK 683
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S++R Y +Y ++L+HIF+ +
Sbjct: 684 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIRAYTTYPRELKHIFHVRS 743
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K L K+ ++K K + S ++L SE+
Sbjct: 744 LHLGHVAKSFGLRDAPRNLSALTRKKRKANL--KRPGLHK----KTQSKHSLAEILRSEY 797
Query: 922 DSGL 925
SG+
Sbjct: 798 SSGM 801
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG Y
Sbjct: 255 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYV 314
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 315 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 374
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 375 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 434
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ + V VLDE+ DQ +D V+ P
Sbjct: 435 V--TRLADISLHDPVSISVLDESH---DQLNPKD----------------KVVQEVCPPP 473
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A L DS IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 474 AGDEL-----------------------DSFAIPESLEQHVTVVPSKLRLVCLAAFILQK 510
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 511 CKF---EKDQKMVVFFSSCELVEFHYSLF 536
>gi|397503696|ref|XP_003822455.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 1 [Pan
paniscus]
Length = 851
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 SRAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 193/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|335281138|ref|XP_003122310.2| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Sus scrofa]
Length = 729
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/573 (45%), Positives = 365/573 (63%), Gaps = 43/573 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K E++F +++ +HP + +N + ++ +T++Q+
Sbjct: 104 SSLFRNNPEIPALLRPAVKQRQESVFTSDAFQAL-DLHPHLISTINTVLKMSSLTSIQKQ 162
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ ++PKI R DG YA+I++PTRELALQ
Sbjct: 163 SIPVLLEGRDALVRSQTGSGKTLAYCIPMVQSLQAVKPKIQRGDGPYALILVPTRELALQ 222
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ ++F
Sbjct: 223 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNMRFC 282
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADR+LD G+E+DIA L + ++P+ Q++LLSATLT V RLA ++L P
Sbjct: 283 RIRWLILDEADRLLDLGFEKDIALILNAVNAERPERQNVLLSATLTEGVTRLADISLHEP 342
Query: 602 IQIDAADST--DIHNTT---------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
++I + + +H + D IP L+QH + P KLRLV+LA+F
Sbjct: 343 VRISVLEGSQDQMHPKSRAILGASPPAASSELDGFAIPVGLEQHVALVPSKLRLVSLAAF 402
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ + + KM+VF ++ ++ ++H L L T+LG + A F +
Sbjct: 403 ILQKCKF---EPDQKMIVFFSSCELVEFHHSLFLQTLLGGSGALAPGRLPSASPPLTFLR 459
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F K+GVL+CTDVAARGLDLP V WIVQYTAPSS +YVHR+G
Sbjct: 460 LHGDMEQEERTAVFQEFSRSKAGVLLCTDVAARGLDLPQVTWIVQYTAPSSPAEYVHRIG 519
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G +GSSLL L PSE + V L + +I++ E+K++D L L + G
Sbjct: 520 RTARIGFQGSSLLILAPSEAEYVNSLASHKIKVSEMKMEDILSVLTRDDCFKGRRWGSQK 579
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+VR YA+Y ++L+HIF+ +
Sbjct: 580 CRAAGPQEIRERATVLQTVFEDYVHSSERTVSWAKKALQSFVRAYATYPRELKHIFHVRS 639
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKN 895
+HLGH AKSF LRDAP +S K K L+
Sbjct: 640 LHLGHVAKSFGLRDAPKNLSASALKKKKAHLRR 672
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 198/329 (60%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T++Q+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ ++PKI R DG YA
Sbjct: 151 LKMSSLTSIQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPMVQSLQAVKPKIQRGDGPYA 210
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 211 LILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 270
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ ++F ++ L+LDEADR+LD G+E+DIA L + ++P+ Q++LLSATLT
Sbjct: 271 DHIKSTKNMRFCRIRWLILDEADRLLDLGFEKDIALILNAVNAERPERQNVLLSATLTEG 330
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+++ + L E RI LE + Q +L A+
Sbjct: 331 V-----------TRLADISLHEPVRI----------SVLEGSQDQMHPKSRAILGASPPA 369
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A L D IP L+QH + P KLRLV+LA+FIL K
Sbjct: 370 ASSEL-----------------------DGFAIPVGLEQHVALVPSKLRLVSLAAFILQK 406
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ + + KM+VF ++ ++ ++H L
Sbjct: 407 CKF---EPDQKMIVFFSSCELVEFHHSLF 432
>gi|114627326|ref|XP_001168526.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 3 [Pan
troglodytes]
Length = 851
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 SRAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 193/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|10440004|dbj|BAB15620.1| unnamed protein product [Homo sapiens]
Length = 674
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/604 (44%), Positives = 369/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 25 SSLFLNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 83
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 84 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 143
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 144 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 203
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI + + + Q++LLSATLT V RLA ++L +P
Sbjct: 204 RLRWLVFDEADRILDLGFEKDITVIPNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 263
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 264 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 323
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 324 ILQKCKF---EEDQKMVVFFSSCELVEFHCSLFLQTLLSSSGAPASGQLPSASMRLKFLR 380
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 381 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 440
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 441 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 500
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 501 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 560
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 561 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 614
Query: 922 DSGL 925
SG+
Sbjct: 615 SSGM 618
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 193/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 72 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 131
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 132 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 191
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI + + + Q++LLSATLT
Sbjct: 192 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVIPNAVNAECQKRQNVLLSATLTEG 251
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 252 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 290
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 291 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 327
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 328 CKF---EEDQKMVVFFSSCELVEFHCSLF 353
>gi|426363390|ref|XP_004048823.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 1
[Gorilla gorilla gorilla]
Length = 851
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/604 (45%), Positives = 372/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTTD----------------SLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N D S IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELGSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 558 LHGGMEQQERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 PHAAGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A L S IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDELG-----------------------SFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|345806223|ref|XP_537810.3| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Canis lupus
familiaris]
Length = 742
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/603 (43%), Positives = 366/603 (60%), Gaps = 47/603 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F ++ E +HP + +N +N+T +T+VQ+
Sbjct: 107 SSLFKNNPEIPELHRPVVKQVQEKVFTSDAFHEL-DLHPHLISTINTVLNMTSMTSVQKQ 165
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+PKI R DG YA++++PTRELALQ
Sbjct: 166 SIPALLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKPKIQRSDGPYALVLVPTRELALQ 225
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 226 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFC 285
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADRILD G+E+DI L L + + Q++LLSATLT V LAG++L +P
Sbjct: 286 RIRWLILDEADRILDLGFEKDITVILNALNAECQKRQNVLLSATLTEGVTWLAGISLLSP 345
Query: 602 IQIDAADS----TDIHNTT-------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
++I D +D+ DS IP+SL QH + P KLRLV LA+F
Sbjct: 346 VRISVLDEHHGQSDLKGRAVPEASPLPACGELDSFAIPESLDQHVTLVPSKLRLVTLAAF 405
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL---------------GENIAFFK 689
IL KC+ +++ KMLVF ++ ++ ++H L L + F +
Sbjct: 406 ILQKCKF---EKDQKMLVFFSSCELVEFHYHLFLQTLPSCSGTLASGRPPSASTQLKFLR 462
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M+Q ERT VF+ F ++G+L+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 463 LHGNMAQEERTAVFQEFSHCETGILLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 522
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQ-----NLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I I EIK++D L + G
Sbjct: 523 RTARIGCHGSSLLILAPSEAEYVNSLASHKINISEIKMEDILSVLTRDDCFKRSRWGSQK 582
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K +++R YA+Y ++L+HIF+ +
Sbjct: 583 SRASGPQEIRERATVLQTVFEDYVHSNERRVSWAKKALQAFIRAYATYPRELKHIFHVRS 642
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+HLGH AKSF LRDAP +S + K L + + + + SE+
Sbjct: 643 LHLGHVAKSFGLRDAPQKLSVTAVKRRKANLNRPDLHKKSHSTHHRLAEI----LRSEYS 698
Query: 923 SGL 925
SG+
Sbjct: 699 SGM 701
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 198/330 (60%), Gaps = 49/330 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+T +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+PKI R DG YA
Sbjct: 154 LNMTSMTSVQKQSIPALLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKPKIQRSDGPYA 213
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 214 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 273
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F ++ L+LDEADRILD G+E+DI L L + + Q++LLSATLT
Sbjct: 274 DHIKSTKNIHFCRIRWLILDEADRILDLGFEKDITVILNALNAECQKRQNVLLSATLTEG 333
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILD-QGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
W L S V VLDE D +G R + E A+
Sbjct: 334 VTWLAGISLL--SPVRISVLDEHHGQSDLKG--RAVPE------------------ASPL 371
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
PA L DS IP+SL QH + P KLRLV LA+FIL
Sbjct: 372 PACGEL-----------------------DSFAIPESLDQHVTLVPSKLRLVTLAAFILQ 408
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
KC+ +++ KMLVF ++ ++ ++H L
Sbjct: 409 KCKF---EKDQKMLVFFSSCELVEFHYHLF 435
>gi|332255425|ref|XP_003276832.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 1
[Nomascus leucogenys]
Length = 851
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/604 (45%), Positives = 373/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SL+QH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLEQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASTRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHGSM Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY+APSS +Y+HR+G
Sbjct: 558 LHGSMEQEERTAVFQEFSRSRRGVLLCTDVAARGLDLPQVTWIVQYSAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K LK + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRRKRKAHLKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LDSFAIPESLEQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|68360354|ref|XP_683832.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 1
[Danio rerio]
Length = 739
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/598 (44%), Positives = 378/598 (63%), Gaps = 41/598 (6%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP+V + + V E +F ++EE +HP + L++ +N++ +T+VQ+
Sbjct: 126 SSLFRNNPEIPDVLSPAVNQVKEKVFTSNTFEEL-NLHPHLVATLHKVLNVSSMTSVQKQ 184
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I ++ G D +VRSQTGSGKTLAY IP++Q LQ ++PK+ R DG AV+I+PTRELALQ
Sbjct: 185 TIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLAVVIVPTRELALQ 244
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ ++F KL + FTWIVP L GGEK K+EKAR+RKGI++L++TPGRL+DH K+T ++ FS
Sbjct: 245 SFQMFQKLLRPFTWIVPGVLMGGEKKKAEKARLRKGINVLISTPGRLVDHIKNTLSIAFS 304
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
V L+LDEADRILD G+E+D+ L L P Q++LLSAT+T + RLA +++++P
Sbjct: 305 AVRWLILDEADRILDLGFEKDLTVILNALNAAGPDRQNVLLSATITEGLSRLASISMKDP 364
Query: 602 IQIDAADSTD----------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
+ + ++ ++ +DS +P+ L+QH +V P KL LV LA+FIL KC+
Sbjct: 365 VSVHVSEGSEETVEACPQAAPQALSDSYAVPERLQQHVVVVPSKLHLVCLAAFILAKCKF 424
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGE-----------NIAFFKLHGSMSQSERT 700
++ K+++F+++ + ++ L + VL E + F++LHG+M Q ERT
Sbjct: 425 ---EQRQKLIIFISSCEAVEFLLNLFTAVLCEIPSNTSSKSTSCLNFYRLHGNMRQEERT 481
Query: 701 EVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSS 760
EVF+ F K+G+L+CTDVAARGLDLP V WIVQY P S+ +YVHRVGRTAR+G +GSS
Sbjct: 482 EVFQEFSQCKTGILLCTDVAARGLDLPQVTWIVQYNPPVSAAEYVHRVGRTARIGAQGSS 541
Query: 761 LLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS---VKMEG--DLSRLADG---NVE 812
LLFL PSE V+ L N I + E+K+ D L L+ K G D R AD V
Sbjct: 542 LLFLTPSETAFVDVLANHNISLSEMKMVDILSTLMKDERFKGRGKWDSKRSADAFEQEVR 601
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
AT LQ FE+ V +A ++R Y +Y L+HIF+ + +HLGH AKSF
Sbjct: 602 ERATLLQTDFENYVHASNESLQTAKSALQCFLRAYTTYPSSLKHIFHIRMLHLGHAAKSF 661
Query: 873 ALRDAP-SVISGIG-KPKNKEELKNKKMAIN---KEKSFKQRGNFSKKQMLSEFDSGL 925
LRDAP + S I P N + K K K+ + KQR + M SE+DSG+
Sbjct: 662 GLRDAPQGLASSISTNPANSKHSKKAKDKAKSPPKKLTAKQRVS---NLMRSEYDSGM 716
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 195/331 (58%), Gaps = 56/331 (16%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N++ +T+VQ+ +I ++ G D +VRSQTGSGKTLAY IP++Q LQ ++PK+ R DG A
Sbjct: 173 LNVSSMTSVQKQTIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLA 232
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I+PTRELALQ+ ++F KL + FTWIVP L GGEK K+EKAR+RKGI++L++TPGRL+
Sbjct: 233 VVIVPTRELALQSFQMFQKLLRPFTWIVPGVLMGGEKKKAEKARLRKGINVLISTPGRLV 292
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K+T ++ FS V L+LDEADRILD G+E+D+ L L P Q++LLSAT+T
Sbjct: 293 DHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLTVILNALNAAGPDRQNVLLSATITEG 352
Query: 181 TCWCKHTETLKFSKVEHLVL-DEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
S++ + + D + +G E E +E + PQ S
Sbjct: 353 -----------LSRLASISMKDPVSVHVSEGSE----ETVEACPQAAPQALS-------- 389
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
DS +P+ L+QH +V P KL LV LA+FIL
Sbjct: 390 -----------------------------DSYAVPERLQQHVVVVPSKLHLVCLAAFILA 420
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLS 330
KC+ ++ K+++F+++ + ++ L +
Sbjct: 421 KCKF---EQRQKLIIFISSCEAVEFLLNLFT 448
>gi|34784845|gb|AAH56735.1| Si:ch211-89p1.3 protein [Danio rerio]
Length = 673
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/598 (44%), Positives = 377/598 (63%), Gaps = 41/598 (6%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP+V + + V E +F ++EE +HP + L++ +N++ +T+VQ+
Sbjct: 60 SSLFRNNPEIPDVLSPAVNQVKEKVFTSNTFEEL-NLHPHLVATLHKVLNVSSMTSVQKQ 118
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I ++ G D +VRSQTGSGKTLAY IP++Q LQ ++PK+ R DG AV+I+PTRELALQ
Sbjct: 119 TIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLAVVIVPTRELALQ 178
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ ++F KL + FTWIVP L GGEK K+EKAR+RKGI++L++TPGRL+DH K+T ++ FS
Sbjct: 179 SFQMFQKLLRPFTWIVPGVLMGGEKKKAEKARLRKGINVLISTPGRLVDHIKNTLSIAFS 238
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
V L+LDEADRILD G+E+D+ L L P Q++LLSAT+T + RLA +++++P
Sbjct: 239 AVRWLILDEADRILDLGFEKDLTVILNALNTAGPDRQNVLLSATITEGLSRLASISMKDP 298
Query: 602 IQIDAADSTD----------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
+ + ++ ++ +DS +P+ L+QH +V P KL LV LA+FIL KC+
Sbjct: 299 VSVHVSEGSEETVEACPQAAPQALSDSYAVPERLQQHVVVVPSKLHLVCLAAFILAKCKF 358
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGE-----------NIAFFKLHGSMSQSERT 700
++ K+++F+++ + ++ L + VL E + F++LHG+M Q ERT
Sbjct: 359 ---EQRQKLVIFISSCEAVEFLLNLFTAVLCEIPSNTSSKSTSCLNFYRLHGNMRQEERT 415
Query: 701 EVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSS 760
EVF+ F K+G+L+CTDVAARGLDLP V WIVQY P S+ +YVHRVGRTAR+G +GSS
Sbjct: 416 EVFQEFSQCKTGILLCTDVAARGLDLPQVTWIVQYNPPVSAAEYVHRVGRTARIGAQGSS 475
Query: 761 LLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS---VKMEG--DLSRLADG---NVE 812
LLFL PSE V+ L N I + E+K+ D L L+ K G D R AD V
Sbjct: 476 LLFLTPSETAFVDVLANHNISLSEMKMVDILSTLMKDERFKGRGKWDSKRSADAFEQEVR 535
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
AT LQ FE+ V +A ++R Y +Y L+HIF+ + +HLGH AKSF
Sbjct: 536 ERATLLQTDFENYVHASNESLQTAKSALQCFLRAYTTYPSSLKHIFHIRMLHLGHAAKSF 595
Query: 873 ALRDAP-SVISGIG-KPKNKEELKNKKMAIN---KEKSFKQRGNFSKKQMLSEFDSGL 925
LRDAP + S I P N + K K K+ + KQR M SE+DSG+
Sbjct: 596 GLRDAPQGLASSISTNPANSKHSKKAKDKAKSPPKKLTAKQR---VSNLMRSEYDSGM 650
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 195/331 (58%), Gaps = 56/331 (16%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N++ +T+VQ+ +I ++ G D +VRSQTGSGKTLAY IP++Q LQ ++PK+ R DG A
Sbjct: 107 LNVSSMTSVQKQTIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLA 166
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I+PTRELALQ+ ++F KL + FTWIVP L GGEK K+EKAR+RKGI++L++TPGRL+
Sbjct: 167 VVIVPTRELALQSFQMFQKLLRPFTWIVPGVLMGGEKKKAEKARLRKGINVLISTPGRLV 226
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K+T ++ FS V L+LDEADRILD G+E+D+ L L P Q++LLSAT+T
Sbjct: 227 DHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLTVILNALNTAGPDRQNVLLSATITEG 286
Query: 181 TCWCKHTETLKFSKVEHLVL-DEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
S++ + + D + +G E E +E + PQ S
Sbjct: 287 -----------LSRLASISMKDPVSVHVSEGSE----ETVEACPQAAPQALS-------- 323
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
DS +P+ L+QH +V P KL LV LA+FIL
Sbjct: 324 -----------------------------DSYAVPERLQQHVVVVPSKLHLVCLAAFILA 354
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLS 330
KC+ ++ K+++F+++ + ++ L +
Sbjct: 355 KCKF---EQRQKLVIFISSCEAVEFLLNLFT 382
>gi|443697896|gb|ELT98171.1| hypothetical protein CAPTEDRAFT_160521 [Capitella teleta]
Length = 548
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/547 (45%), Positives = 369/547 (67%), Gaps = 38/547 (6%)
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
M NL + + ++T VQ+ SI ++ G DVL++SQTGSGKTL YA+PI+ LQ+M P++
Sbjct: 1 MVSNLEAVLKVKEMTEVQKQSIPWVIAGRDVLIKSQTGSGKTLCYAVPIVHLLQKMEPRV 60
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
SR+ G+Y+++I+PTRELA+Q+LE+F KL + FTWIVP + GGEK KSEK+R+RKGI+IL
Sbjct: 61 SREHGVYSLVIVPTRELAVQSLELFQKLTRPFTWIVPGAIMGGEKKKSEKSRLRKGINIL 120
Query: 522 VATPGRLLDHCKHTETLKFSKVEHLVLDEADR---ILDQGYERDIAEFLEILKKQ-KPQF 577
+ TPGRL DH ++TE+L S V+ LV+DEADR +L+ G+++D+++ ++IL+++
Sbjct: 121 ICTPGRLADHLQNTESLGLSNVKWLVIDEADRHVALLEMGFQKDVSQIVDILQQRGSADR 180
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT-------TDSLVIPDSLKQHFI 630
++LLSATL+ V+ LA M+LQNP+++D S ++ D++ +P+ L H++
Sbjct: 181 NTLLLSATLSKGVEELACMSLQNPVRVDMVQSDGKSSSDGAAKEIGDAIALPEHLSHHYM 240
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGEN----IA 686
VTP KLRLV LA+FI+ KC+ N + SK+LVFM+TQ D+H +L TVLGE +
Sbjct: 241 VTPSKLRLVTLAAFIMWKCKLSN--KRSKVLVFMSTQQSVDFHYDLFHTVLGEGETSKLN 298
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
FKLHG M+Q ERT+VF+ F +K G+L+CTDVA+RGLD+P V WI+QYT P+++TDYVH
Sbjct: 299 LFKLHGEMAQKERTQVFQEFSKLKDGLLLCTDVASRGLDMPRVKWIIQYTPPATATDYVH 358
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
RVGRTAR+G G++LLFL+PSEV ++ L ++++IE + + D L+ L +M + L
Sbjct: 359 RVGRTARIGGHGNALLFLLPSEVDYIKVLAEQKVKIESVPMDDVLETL---RMHA--ASL 413
Query: 807 ADGN-------VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
A G+ VE ALQM E V + K + A K Y S +R YA+Y L+HIF+
Sbjct: 414 AQGSKIKHVKTVEECCAALQMKLEDCVSKNKEMTALAGKAYQSAIRAYAAYPAALKHIFH 473
Query: 860 FKQIHLGHFAKSFALRDAPSVISGI-GKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML 918
+ +HLGH AKSFAL + P++I I + K+ ++ A ++K Q +
Sbjct: 474 KRFLHLGHMAKSFALLEDPTMIGNIVNRQHQKDHGSSRNWAPQRKKPL--------TQTM 525
Query: 919 SEFDSGL 925
SEFDSG
Sbjct: 526 SEFDSGF 532
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 195/342 (57%), Gaps = 74/342 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + ++T VQ+ SI ++ G DVL++SQTGSGKTL YA+PI+ LQ+M P++SR+ G+Y+
Sbjct: 9 LKVKEMTEVQKQSIPWVIAGRDVLIKSQTGSGKTLCYAVPIVHLLQKMEPRVSREHGVYS 68
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTRELA+Q+LE+F KL + FTWIVP G M EK
Sbjct: 69 LVIVPTRELAVQSLELFQKLTRPFTWIVP-----GAIMGGEK------------------ 105
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
K +E + K ++++ R+ D
Sbjct: 106 ---KKSEKSRLRKGINILICTPGRLADH-------------------------------- 130
Query: 181 TCWCKHTETLKFSKVEHLVLDEADR---ILDQGYERDIAEFLEILKKQ-KPQFQSVLLSA 236
++TE+L S V+ LV+DEADR +L+ G+++D+++ ++IL+++ ++LLSA
Sbjct: 131 ---LQNTESLGLSNVKWLVIDEADRHVALLEMGFQKDVSQIVDILQQRGSADRNTLLLSA 187
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNT-------TDSLVIPDSLKQHFIVTPPKLR 289
TL+ V+ LA M+LQNP+++D S ++ D++ +P+ L H++VTP KLR
Sbjct: 188 TLSKGVEELACMSLQNPVRVDMVQSDGKSSSDGAAKEIGDAIALPEHLSHHYMVTPSKLR 247
Query: 290 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
LV LA+FI+ KC+ N + SK+LVFM+TQ D+H +L T
Sbjct: 248 LVTLAAFIMWKCKLSN--KRSKVLVFMSTQQSVDFHYDLFHT 287
>gi|301777982|ref|XP_002924414.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Ailuropoda melanoleuca]
Length = 739
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/606 (44%), Positives = 376/606 (62%), Gaps = 53/606 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F ++ E +HP + +N +N+T++T+VQ+
Sbjct: 104 SSLFKNNPEIPELHRPVVKQVQEKVFTSDAFHEL-DLHPHLISTINTVLNMTRMTSVQKQ 162
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRELALQ
Sbjct: 163 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYALVLVPTRELALQ 222
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 223 SFDTVQKLLKPFTWIVPGVLMGGERRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 282
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+++ L+LDEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 283 RIQWLILDEADRILDLGFEKDITVILNAINAECQKRQNVLLSATLTEGVTRLADISLLNP 342
Query: 602 IQIDAADST-----------------DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
++I D DS IP+SL QH + P KLRLV+LA+F
Sbjct: 343 VRISVLDQHHGQSDPKGREVPEASPLSAAGEPDSFAIPESLDQHVTLVPSKLRLVSLAAF 402
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA---------------FF 688
IL +C+ +++ KM+VF ++ ++ ++H L + T+LG + A F
Sbjct: 403 ILQQCKF---EKDQKMIVFFSSCELVEFHYHLFVQTLLGRSGAPASGQLLPSAATRLKFL 459
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
+LHG+M Q ERT VF+ F K+GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+
Sbjct: 460 RLHGNMEQEERTAVFQEFSHSKTGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRI 519
Query: 749 GRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL------SVKMEGD 802
GRTAR+G GSSLL L PSE + V L + +I + EIK++D L L +
Sbjct: 520 GRTARIGCRGSSLLILAPSEAEYVNSLASHKINVSEIKVEDILSVLTRDDGFKGSRWGSQ 579
Query: 803 LSRLADGN-VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
SR A + AT LQ FE V + + A K +++R YA+Y ++L+HIF+ +
Sbjct: 580 KSRAAGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQAFIRAYATYPRELKHIFHVR 639
Query: 862 QIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQ-RGNFSKKQML-S 919
+HLGH AKSF LRDAP +S +K ++ +N+ K+ R ++L S
Sbjct: 640 SLHLGHVAKSFGLRDAPQNLSVAA-------VKRRQANLNRADLHKKTRSKHRLAEILRS 692
Query: 920 EFDSGL 925
E+ SG+
Sbjct: 693 EYSSGM 698
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 199/329 (60%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+T++T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 151 LNMTRMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYA 210
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+
Sbjct: 211 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGERRKSEKARLRKGINILISTPGRLV 270
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F +++ L+LDEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 271 DHIKSTKNIHFRRIQWLILDEADRILDLGFEKDITVILNAINAECQKRQNVLLSATLTEG 330
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
L ++ +LDQ + + + E+ ++ LSA P
Sbjct: 331 VTRLADISLLNPVRIS---------VLDQHHGQSDPKGREVP-------EASPLSAAGEP 374
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
DS IP+SL QH + P KLRLV+LA+FIL +
Sbjct: 375 ----------------------------DSFAIPESLDQHVTLVPSKLRLVSLAAFILQQ 406
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 407 CKF---EKDQKMIVFFSSCELVEFHYHLF 432
>gi|348570370|ref|XP_003470970.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like [Cavia
porcellus]
Length = 818
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/603 (43%), Positives = 376/603 (62%), Gaps = 49/603 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP IP + +K E +F P ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 91 SSLFKNNPAIPELHRPVVKQAREQVFTPEAFHEL-GLHPHLISTINTVLKVSSMTSVQKQ 149
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA++++PTRELALQ
Sbjct: 150 SIPVLLEGRDALVRSQTGSGKTLAYCIPMVQSLQATKSKIQRSDGPYALVLVPTRELALQ 209
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 210 SFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 269
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+++ LVLDEADRILD G+E+D+ L + + + Q++LLSATLT +V RLA ++L NP
Sbjct: 270 RIQWLVLDEADRILDLGFEKDLTVILNAVNAEGQKRQNVLLSATLTESVTRLADISLHNP 329
Query: 602 IQIDAADST-----------------DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SL+QH + P KLRLV LA+F
Sbjct: 330 VSISVVDRSHDQSIPKGRAAQDPGPPQTGSRLDSFAIPESLEQHVTLVPSKLRLVCLAAF 389
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL----LSTVLGE-----------NIAFFK 689
IL KC+ +++ K++VF ++ ++ ++H L L ++ G + F +
Sbjct: 390 ILQKCKF---EKDQKVIVFFSSCELVEFHYNLFLQTLQSLTGAPASGPVPSASVGLKFLR 446
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q ERT VF+ F K+GVL+CTDVAARGLDLP V WI+QYTAP+S +Y+HR+G
Sbjct: 447 LHGNMEQEERTAVFQEFSYSKTGVLLCTDVAARGLDLPQVTWIIQYTAPASPAEYIHRIG 506
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL------SVKMEGDL 803
RTAR+G GSSLL L PSE + V L + +I + EIK++D L L + + E
Sbjct: 507 RTARIGCRGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILSVLTQDDCFKARRRESQK 566
Query: 804 SR-LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
S + + AT LQ FE V + ++A + S++ YA+Y ++L+HIF+ +
Sbjct: 567 SHAVGPQEIRERATVLQTLFEDYVHSTERTASAAKQALQSFIGAYAAYPRELKHIFHVRS 626
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+HLGH AKSF LRDAP +G P + + K+ + ++ KQR + + SE+
Sbjct: 627 LHLGHVAKSFGLRDAP---RNLGIPARRRKAALKRPDLRRKPQSKQRLT---ELLCSEYS 680
Query: 923 SGL 925
SGL
Sbjct: 681 SGL 683
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA
Sbjct: 138 LKVSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPMVQSLQATKSKIQRSDGPYA 197
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 198 LVLVPTRELALQSFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 257
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS+++ LVLDEADRILD G+E+D+ L + + + Q++LLSATLT +
Sbjct: 258 DHIKSTKNIHFSRIQWLVLDEADRILDLGFEKDLTVILNAVNAEGQKRQNVLLSATLTES 317
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + DR DQ +
Sbjct: 318 V-----TRLADISLHNPVSISVVDRSHDQSIPK--------------------------- 345
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
G Q+P + DS IP+SL+QH + P KLRLV LA+FIL K
Sbjct: 346 ------GRAAQDP------GPPQTGSRLDSFAIPESLEQHVTLVPSKLRLVCLAAFILQK 393
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ K++VF ++ ++ ++H L
Sbjct: 394 CKF---EKDQKVIVFFSSCELVEFHYNLF 419
>gi|281354492|gb|EFB30076.1| hypothetical protein PANDA_013740 [Ailuropoda melanoleuca]
Length = 706
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/606 (44%), Positives = 376/606 (62%), Gaps = 53/606 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F ++ E +HP + +N +N+T++T+VQ+
Sbjct: 74 SSLFKNNPEIPELHRPVVKQVQEKVFTSDAFHEL-DLHPHLISTINTVLNMTRMTSVQKQ 132
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRELALQ
Sbjct: 133 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYALVLVPTRELALQ 192
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 193 SFDTVQKLLKPFTWIVPGVLMGGERRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 252
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+++ L+LDEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 253 RIQWLILDEADRILDLGFEKDITVILNAINAECQKRQNVLLSATLTEGVTRLADISLLNP 312
Query: 602 IQIDAADST-----------------DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
++I D DS IP+SL QH + P KLRLV+LA+F
Sbjct: 313 VRISVLDQHHGQSDPKGREVPEASPLSAAGEPDSFAIPESLDQHVTLVPSKLRLVSLAAF 372
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA---------------FF 688
IL +C+ +++ KM+VF ++ ++ ++H L + T+LG + A F
Sbjct: 373 ILQQCKF---EKDQKMIVFFSSCELVEFHYHLFVQTLLGRSGAPASGQLLPSAATRLKFL 429
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
+LHG+M Q ERT VF+ F K+GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+
Sbjct: 430 RLHGNMEQEERTAVFQEFSHSKTGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRI 489
Query: 749 GRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL------SVKMEGD 802
GRTAR+G GSSLL L PSE + V L + +I + EIK++D L L +
Sbjct: 490 GRTARIGCRGSSLLILAPSEAEYVNSLASHKINVSEIKVEDILSVLTRDDGFKGSRWGSQ 549
Query: 803 LSRLAD-GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
SR A + AT LQ FE V + + A K +++R YA+Y ++L+HIF+ +
Sbjct: 550 KSRAAGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQAFIRAYATYPRELKHIFHVR 609
Query: 862 QIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQ-RGNFSKKQML-S 919
+HLGH AKSF LRDAP +S +K ++ +N+ K+ R ++L S
Sbjct: 610 SLHLGHVAKSFGLRDAPQNLSVAA-------VKRRQANLNRADLHKKTRSKHRLAEILRS 662
Query: 920 EFDSGL 925
E+ SG+
Sbjct: 663 EYSSGM 668
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 199/329 (60%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+T++T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 121 LNMTRMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYA 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+
Sbjct: 181 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGERRKSEKARLRKGINILISTPGRLV 240
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F +++ L+LDEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 241 DHIKSTKNIHFRRIQWLILDEADRILDLGFEKDITVILNAINAECQKRQNVLLSATLTEG 300
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
L ++ +LDQ + + P+ + V ++ L+
Sbjct: 301 VTRLADISLLNPVRIS---------VLDQHH-----------GQSDPKGREVPEASPLSA 340
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A DS IP+SL QH + P KLRLV+LA+FIL +
Sbjct: 341 A------------------------GEPDSFAIPESLDQHVTLVPSKLRLVSLAAFILQQ 376
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 377 CKF---EKDQKMIVFFSSCELVEFHYHLF 402
>gi|344271256|ref|XP_003407456.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Loxodonta
africana]
Length = 690
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 271/626 (43%), Positives = 376/626 (60%), Gaps = 51/626 (8%)
Query: 339 KEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGI 398
K+Y+ N +K VK+ SSLF+NNP+IP + +K V E +F ++ E +
Sbjct: 54 KKYSAGTSNVNQEEKPCVKT---SSLFKNNPEIPELHRPAVKQVQEKVFTSDAFHEL-DL 109
Query: 399 HPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
HP + +N + ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+
Sbjct: 110 HPHLIATINTVLKMSSMTSVQKQSIPALLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMK 169
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 518
KI R DG YA++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI
Sbjct: 170 SKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGI 229
Query: 519 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 578
+IL++TPGRL+DH + T+ + FS++ L+LDEADRILD G+E+DI L + + + Q
Sbjct: 230 NILISTPGRLVDHIRSTKNIHFSRIRWLILDEADRILDLGFEKDITVILNAVNAECQKRQ 289
Query: 579 SILLSATLTPAVQRLAGMTLQNPIQIDAADSTD-----------------IHNTTDSLVI 621
++LLSATLT V LA ++L +P+ I D + + DS I
Sbjct: 290 NVLLSATLTEGVTWLADISLHDPVSISVLDESHDQCNPKDKAAREVSQPRTSDKLDSFAI 349
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
P+SL QH + P KLRLV LA+FIL KC+ +++ K++VF ++ ++ ++H L L
Sbjct: 350 PESLDQHVTLVPSKLRLVCLAAFILQKCKF---EKDQKLIVFFSSCELVEFHYTLFLQTL 406
Query: 682 GEN---------------IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
+ + F +LHG M Q ERT VF+ F KSGVL+CTDVAARGLDL
Sbjct: 407 QSSSGAPAAVHLPSASVRLKFLRLHGDMEQEERTAVFQEFSHSKSGVLLCTDVAARGLDL 466
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
P V WIVQY APSS +Y+HR+GRTAR+G GSSLL L PSE + V L + +I I EIK
Sbjct: 467 PQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINISEIK 526
Query: 787 LKDCLQNL-----LSVKMEGDLSRLADG--NVETAATALQMSFESAVLQQKILHTSACKG 839
++D L L + G A G + AT LQ FE V + + A K
Sbjct: 527 MEDILSVLTRDDCFKGRRCGSQKSRAIGPQEIRERATVLQTVFEDYVHSSERRVSWAKKA 586
Query: 840 YTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMA 899
S++R YA+Y ++L+HIF+ + +HLGH AKSF LRDAP+ +S K K LK +
Sbjct: 587 LQSFIRAYATYPRELKHIFHVRSLHLGHMAKSFGLRDAPTNLSVSALKKRKANLKRPDLH 646
Query: 900 INKEKSFKQRGNFSKKQMLSEFDSGL 925
QR + + + SE+ SG+
Sbjct: 647 RK-----TQRKHRLAEILRSEYSSGV 667
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 121 LKMSSMTSVQKQSIPALLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYA 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 181 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 240
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH + T+ + FS++ L+LDEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 241 DHIRSTKNIHFSRIRWLILDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 300
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
W + V VLDE+ DQ +D
Sbjct: 301 VTWL--ADISLHDPVSISVLDESH---DQCNPKD-------------------------- 329
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A + P D DS IP+SL QH + P KLRLV LA+FIL K
Sbjct: 330 ----KAAREVSQPRTSD---------KLDSFAIPESLDQHVTLVPSKLRLVCLAAFILQK 376
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ K++VF ++ ++ ++H L
Sbjct: 377 CKF---EKDQKLIVFFSSCELVEFHYTLF 402
>gi|354503106|ref|XP_003513622.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Cricetulus griseus]
Length = 710
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/595 (44%), Positives = 371/595 (62%), Gaps = 40/595 (6%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K E +F+P +++E +HP + +N + ++ +T+VQ+
Sbjct: 97 SSLFKNNPEIPALHRAVVKQAREQVFSPEAFQEL-DLHPHLISTINTVLKMSSMTSVQKQ 155
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA++++PTRELALQ
Sbjct: 156 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVPTRELALQ 215
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH + T+ + F+
Sbjct: 216 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIRSTKNIHFN 275
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+++ LV+DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 276 RIQWLVVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHNP 335
Query: 602 IQIDAADST--------DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
+ I D D DS IP+SL QH ++ P KLRLV LA+FIL KC+
Sbjct: 336 VSISVLDKIWDQPNPKEDASTQLDSFAIPESLDQHVVLVPSKLRLVCLAAFILQKCKF-- 393
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGEN---------------IAFFKLHGSMSQSE 698
+++ KM+VF ++ ++ ++H + L + F +LHG+M Q E
Sbjct: 394 -EKDQKMIVFFSSCELVEFHYSIFVHTLSCRSGAPTSEQLPSASWPLKFLRLHGNMEQEE 452
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
RT VF F +GVL+CTDVAARGLDLP V WIVQY+APSS +Y+HR+GRTAR+G G
Sbjct: 453 RTSVFHEFSHSGTGVLLCTDVAARGLDLPHVTWIVQYSAPSSPAEYIHRIGRTARIGCHG 512
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLSRLADGNVET 813
SSLL L PSE + V L + +I + EIK++D L + + G A G+ E
Sbjct: 513 SSLLILAPSEAEYVNSLASHKINVSEIKMEDILAVLTKDDCFKRRQRGAQKSHATGSQEI 572
Query: 814 --AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
AT LQ FE V + + A K S++R YA+Y ++L+ IF+ + +HLGH AKS
Sbjct: 573 RERATVLQTVFEDYVHSSERTVSWAKKALQSFIRAYATYPRELKPIFHVRSLHLGHVAKS 632
Query: 872 FALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEFDSGL 925
F LRDAP +S + K K LK + + + + +F ++L SE+ SGL
Sbjct: 633 FGLRDAPRNLS-VSTVKKKASLKRP----DPRRKTRNKHHFVLAEVLHSEYSSGL 682
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 192/329 (58%), Gaps = 56/329 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA
Sbjct: 144 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYA 203
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 204 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 263
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH + T+ + F++++ LV+DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 264 DHIRSTKNIHFNRIQWLVVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 323
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + D+I DQ
Sbjct: 324 V-----TRLADISLHNPVSISVLDKIWDQ------------------------------- 347
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
NP + D DS IP+SL QH ++ P KLRLV LA+FIL K
Sbjct: 348 ----------PNPKE-------DASTQLDSFAIPESLDQHVVLVPSKLRLVCLAAFILQK 390
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H +
Sbjct: 391 CKF---EKDQKMIVFFSSCELVEFHYSIF 416
>gi|449478219|ref|XP_002195700.2| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Taeniopygia
guttata]
Length = 706
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/659 (41%), Positives = 393/659 (59%), Gaps = 69/659 (10%)
Query: 321 MADYHTELLSTKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLK 380
+AD E S++K + K ++ D N K +K+ SSLF+NNPDIP + + ++
Sbjct: 49 IADRREEGSSSQKSLPK--KHLTDKQNESQKTKPFIKT---SSLFKNNPDIPEIHRKEVR 103
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
+ E +F S+ + +HP + +N +NI +T+VQ+ +I +L G D LVRSQTGS
Sbjct: 104 QLQENVFTTDSFSQL-DLHPHLISTINTVLNICSMTSVQKQTIPVLLQGRDALVRSQTGS 162
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ+ + KL K FTWIVP
Sbjct: 163 GKTLAYGIPLVQSLQGMESKIQRSDGPYALVLVPTRELALQSFDTIQKLLKPFTWIVPGV 222
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
L GGEK KSEKAR+RKGI+IL++TPGRL+DH + TE + F + + L++DEADRILD G+E
Sbjct: 223 LMGGEKRKSEKARLRKGINILISTPGRLVDHIRSTECIHFRRTQWLIIDEADRILDLGFE 282
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS----------T 610
+D+A L L ++ Q++LLSATLT V RLA ++L +P+ I AD T
Sbjct: 283 KDVAVILNALNAERETRQNVLLSATLTEGVTRLAHISLNDPVSISIADEIQKVPEPASQT 342
Query: 611 DIHNTTDS-------LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVF 663
D ++ S +P++L+Q+ ++ P KLRLV LA+FIL KC+ ++ KM++F
Sbjct: 343 DRKASSSSNCMGQENFAVPETLQQYVMMVPSKLRLVTLAAFILQKCKF---EKHHKMIIF 399
Query: 664 MATQDMADYHTELLSTVLGE---------------NIAFFKLHGSMSQSERTEVFKTFRS 708
++ + +++ ELL VL ++ F +LHG M Q ERTEVF+ F
Sbjct: 400 FSSCEQVEFYHELLVKVLSGGPESEQPGRSPLSSVSLHFLRLHGDMEQEERTEVFQEFLK 459
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
K+G+L+CTDVAARGLDLP V WIVQY AP+S +Y+HR+GRTAR+G GSSLL L PSE
Sbjct: 460 SKTGILLCTDVAARGLDLPQVTWIVQYNAPASPAEYIHRIGRTARIGCRGSSLLVLAPSE 519
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLL-----SVKMEGDLSRLADG--NVETAATALQMS 821
+ V L + +I + E+K++ L +L+ S+ G V AT LQ
Sbjct: 520 AEYVSLLASHKINVSELKMEKVLASLMKDDRFSLHRPGRKKSCGKNPQEVRERATVLQTK 579
Query: 822 FESAVLQQKILHTSACKGYTSWVR--------FYASYSKDLRHIFNFKQIHLGHFAKSFA 873
FE+ H +C+G W + Y +Y KDL+HIF+ K +HLGH AKSF
Sbjct: 580 FEN--------HVHSCEGTVQWAKKALQSFLCAYTTYPKDLKHIFHIKSLHLGHVAKSFG 631
Query: 874 LRDAPSVISGI--GKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGLPQRKP 930
LRDAP ++ + K K + + K+ + K+ K+R + + SE+ SG+ P
Sbjct: 632 LRDAPQNLTALPTAGSKRKTKPRLKRSELLKKTPGKRR---LAELLRSEYSSGMDTSGP 687
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 202/329 (61%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+NI +T+VQ+ +I +L G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 132 LNICSMTSVQKQTIPVLLQGRDALVRSQTGSGKTLAYGIPLVQSLQGMESKIQRSDGPYA 191
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 192 LVLVPTRELALQSFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 251
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH + TE + F + + L++DEADRILD G+E+D+A L L ++ Q++LLSATLT
Sbjct: 252 DHIRSTECIHFRRTQWLIIDEADRILDLGFEKDVAVILNALNAERETRQNVLLSATLTEG 311
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+++ H+ L++ I IA+ EI K +P Q+
Sbjct: 312 V-----------TRLAHISLNDPVSI-------SIAD--EIQKVPEPASQT--------- 342
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A+ S++ ++ +P++L+Q+ ++ P KLRLV LA+FIL K
Sbjct: 343 --------------DRKASSSSNCMG-QENFAVPETLQQYVMMVPSKLRLVTLAAFILQK 387
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ ++ KM++F ++ + +++ ELL
Sbjct: 388 CKF---EKHHKMIIFFSSCEQVEFYHELL 413
>gi|449269038|gb|EMC79847.1| putative ATP-dependent RNA helicase DDX31, partial [Columba livia]
Length = 629
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/590 (44%), Positives = 365/590 (61%), Gaps = 56/590 (9%)
Query: 357 KSGPI---SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNIT 413
KS P SSLF+NNPDIP + + ++ V E +F S+ E +HP + +N + I
Sbjct: 14 KSKPFVKTSSLFKNNPDIPEIHRKAVQQVQENVFTTESFSELE-LHPHLISTINTVLKIN 72
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
+T+VQ+ +I +L G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA+I++
Sbjct: 73 SMTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMESKIQRSDGPYALILV 132
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELALQ+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K
Sbjct: 133 PTRELALQSFDTMQKLLKPFAWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIK 192
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
TE + F + + LV+DEADRILD G+E+DIA L L ++ Q++LLSATLT V RL
Sbjct: 193 STECIHFRRTQWLVIDEADRILDLGFEKDIAVILNALNAERDTRQNVLLSATLTEGVTRL 252
Query: 594 AGMTLQNPIQIDAADS----------TDIHNTTDS-------LVIPDSLKQHFIVTPPKL 636
A ++L +PI I AD TD ++ S +P+ LKQ+ ++ P KL
Sbjct: 253 ADISLNDPISISVADEIQNGLKPASQTDRQASSSSNRMDQENFAVPEKLKQYVVMVPSKL 312
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL---------------STVL 681
RLV LA+FIL KC+ ++ KM++F ++ + +++ ELL S++
Sbjct: 313 RLVVLAAFILEKCKF---EKHHKMIIFFSSCEQVEFYYELLLKVLSGGLETKQPEHSSIS 369
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
++ F +LHG+M Q ERTEVF+ F K+G+L+CTDVAARGLDLP V WIVQY AP+S
Sbjct: 370 SAHLEFLRLHGNMDQEERTEVFQEFLKSKTGILLCTDVAARGLDLPQVTWIVQYNAPASP 429
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS---VK 798
+Y+HR+GRTAR+G G+SLL L PSE + V L + +I + EIK++ L +L+ K
Sbjct: 430 AEYIHRIGRTARIGCHGNSLLVLAPSEAEYVSLLASHKINVSEIKMEKVLSSLMKDDRFK 489
Query: 799 MEGDLSRLADG----NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDL 854
+ + + G V AT LQ FE+ V + A K S++ Y +Y ++L
Sbjct: 490 VHRPGRKKSCGMDPQEVRERATVLQTKFENHVHSSEGTVRWAKKALQSFLCAYTTYPRNL 549
Query: 855 RHIFNFKQIHLGHFAKSFALRDAPSVISGI----------GKPKNKEELK 894
+HIF+ K +HLGH AKSF LRDAP ++ + G+PK + LK
Sbjct: 550 KHIFHIKSLHLGHVAKSFGLRDAPQNLTALPTAGSKKKTKGRPKRSDLLK 599
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ I +T+VQ+ +I +L G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 69 LKINSMTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMESKIQRSDGPYA 128
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQ+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 129 LILVPTRELALQSFDTMQKLLKPFAWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 188
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K TE + F + + LV+DEADRILD G+E+DIA L L ++ Q++LLSATLT
Sbjct: 189 DHIKSTECIHFRRTQWLVIDEADRILDLGFEKDIAVILNALNAERDTRQNVLLSATLTEG 248
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
V AD L+ +A+ EI KP Q+
Sbjct: 249 ------------------VTRLADISLNDPISISVAD--EIQNGLKPASQT--------- 279
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A S+ ++ +P+ LKQ+ ++ P KLRLV LA+FIL K
Sbjct: 280 ---------------DRQASSSSNRMDQENFAVPEKLKQYVVMVPSKLRLVVLAAFILEK 324
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ ++ KM++F ++ + +++ ELL
Sbjct: 325 CKF---EKHHKMIIFFSSCEQVEFYYELL 350
>gi|74147664|dbj|BAE38708.1| unnamed protein product [Mus musculus]
Length = 687
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/551 (45%), Positives = 353/551 (64%), Gaps = 34/551 (6%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + + +K E +F+P +++E +HP + +N + ++ +T+VQ+
Sbjct: 75 SSLFKNNPEIPELHSTAVKQAREQVFSPEAFQEL-DLHPHLISTINTVLKMSSMTSVQKQ 133
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA++++PTRELALQ
Sbjct: 134 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVPTRELALQ 193
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ L F+
Sbjct: 194 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNLHFN 253
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L++DEADRILD G+E+DI L + + + Q++LLSATLT V RL ++L NP
Sbjct: 254 RIRWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLVDISLHNP 313
Query: 602 IQIDAADSTDIHNTT--------DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
+ I D +S IP+SL QH ++ P KLRLV LA+FIL KC+
Sbjct: 314 VSISVLDKNCNQPNPKEVASIQLNSFAIPESLDQHVVLVPSKLRLVCLAAFILQKCKF-- 371
Query: 654 EDEESKMLVFMATQDMADYHTEL-LSTVLGEN--------------IAFFKLHGSMSQSE 698
++ KM+VF ++ ++ ++H L L T+L + + F +LHG+M Q E
Sbjct: 372 -EKNQKMIVFFSSCELVEFHYSLFLHTLLCHSGTPTSEHLPSASWPLKFLRLHGNMEQEE 430
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
RT VF F ++GVL+CTDVA+RGLDLP V WIVQY+APSS +Y+HR+GRTAR+G G
Sbjct: 431 RTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRIGRTARIGCHG 490
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLSRLADG--NV 811
SSLL L PSE + V L + +I + EIK++D L + + G A G +
Sbjct: 491 SSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAKDDCFKRRQRGAQKSRASGPQEI 550
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
AT LQ FE V + + + A K S++R YA+Y K+L+ IF+ + +HLGH AKS
Sbjct: 551 RERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRALHLGHVAKS 610
Query: 872 FALRDAPSVIS 882
F LRDAP +S
Sbjct: 611 FGLRDAPRNLS 621
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 193/329 (58%), Gaps = 56/329 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA
Sbjct: 122 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYA 181
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 182 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ L F+++ L++DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 242 DHIKSTKNLHFNRIRWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLT-- 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ R++D + P SVL P
Sbjct: 300 --------------------EGVTRLVD-------------ISLHNPVSISVLDKNCNQP 326
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ +A + L +S IP+SL QH ++ P KLRLV LA+FIL K
Sbjct: 327 NPKEVASIQL------------------NSFAIPESLDQHVVLVPSKLRLVCLAAFILQK 368
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ ++ KM+VF ++ ++ ++H L
Sbjct: 369 CKF---EKNQKMIVFFSSCELVEFHYSLF 394
>gi|440900100|gb|ELR51306.1| Putative ATP-dependent RNA helicase DDX31, partial [Bos grunniens
mutus]
Length = 713
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/603 (43%), Positives = 370/603 (61%), Gaps = 47/603 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP +P +K V E +F +++ +HP + +N + ++ +T+VQ+
Sbjct: 104 SSLFKNNPEIPELPRPVVKQVQEKVFTSDAFQAL-DLHPHLISTINTVLKMSSMTSVQKQ 162
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA+I++PTRELALQ
Sbjct: 163 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMQSKIQRGDGPYALILVPTRELALQ 222
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 223 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 282
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 283 QIRWLILDEADRILDLGFEKDLTVILNAVNAKCQERQNVLLSATLTEGVARLADISLHDP 342
Query: 602 IQIDAAD-STDIH----------------NTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D+ + D IP L+QH +V P KLRLV LA+F
Sbjct: 343 VSISVLDESHDVSSPESEAFLEASPPQATDELDGFAIPAGLEQHVVVVPSKLRLVCLAAF 402
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYH-TELLSTVLGENIA--------------FFK 689
IL KC+ + + K++VF ++ ++ ++H T L T+L + A F +
Sbjct: 403 ILQKCKF---ERDQKVIVFFSSCELVEFHYTLFLQTLLSGSGALAPEHLPSTSTPLKFLR 459
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LH ++ Q ERT VF+ F K+G+L CTD+AARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 460 LHSALEQEERTAVFQDFTHSKTGILFCTDIAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 519
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + E+K++D L L + G
Sbjct: 520 RTARIGCHGSSLLVLAPSEAEYVNSLASHKINVSEVKMEDILSVLTKDDCFKGRRGGSQK 579
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S++R YA+Y ++L+HIF+ +
Sbjct: 580 SRAAGPQEIRERATVLQTLFEDYVHSSEETVSGAKKALQSFIRAYATYPRELKHIFHIRL 639
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+HLGH AKSF LRDAP + K K LK + K +S KQR + + SE+
Sbjct: 640 LHLGHMAKSFGLRDAPKNLCASAMKKKKANLKRPDLQRKKTQS-KQR---LAEILRSEYA 695
Query: 923 SGL 925
SG+
Sbjct: 696 SGM 698
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 196/331 (59%), Gaps = 51/331 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 151 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMQSKIQRGDGPYA 210
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 211 LILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 270
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F ++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT
Sbjct: 271 DHIKSTKNIHFRQIRWLILDEADRILDLGFEKDLTVILNAVNAKCQERQNVLLSATLTEG 330
Query: 181 TCWCKHTETLKFSKVEHLVLDE--ADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+++ + L + + +LD+ ++ E L+ PQ
Sbjct: 331 V-----------ARLADISLHDPVSISVLDESHDVSSPESEAFLEASPPQ---------- 369
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
+TD D IP L+QH +V P KLRLV LA+FIL
Sbjct: 370 ----------------------ATD---ELDGFAIPAGLEQHVVVVPSKLRLVCLAAFIL 404
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELL 329
KC+ + + K++VF ++ ++ ++H L
Sbjct: 405 QKCKF---ERDQKVIVFFSSCELVEFHYTLF 432
>gi|296482028|tpg|DAA24143.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Bos taurus]
Length = 736
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/603 (43%), Positives = 370/603 (61%), Gaps = 47/603 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP +P +K V E +F +++ +HP + +N + ++ +T+VQ+
Sbjct: 104 SSLFKNNPEIPELPRPVVKQVQEKVFTSDAFQAL-DLHPHLISTINTVLKMSSMTSVQKQ 162
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA+I++PTRELALQ
Sbjct: 163 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMQSKIQRGDGPYALILVPTRELALQ 222
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 223 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 282
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 283 QIRWLILDEADRILDLGFEKDLTVILNAVNAECQERQNVLLSATLTEGVARLADISLHDP 342
Query: 602 IQIDAAD-STDIH----------------NTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D+ + D IP L+QH +V P KLRLV LA+F
Sbjct: 343 VSISVLDESHDVSSPESEAFLEASPPQATDELDGFAIPAGLEQHVVVVPSKLRLVCLAAF 402
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYH-TELLSTVLGENIA--------------FFK 689
IL KC+ + + K++VF ++ ++ ++H T L T+L + A F +
Sbjct: 403 ILQKCKF---ERDQKVIVFFSSCELVEFHYTLFLQTLLSGSGALAPEHLPSTSTPLKFLR 459
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LH ++ Q ERT VF+ F K+G+L CTD+AARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 460 LHSALEQEERTAVFQDFTHSKTGILFCTDIAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 519
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + E+K++D L L + G
Sbjct: 520 RTARIGCHGSSLLVLAPSEAEYVNSLASHKINVSEVKMEDILSVLTKDDCFKGRRGGSQK 579
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S++R YA+Y ++L+HIF+ +
Sbjct: 580 SRAAGPQEIRERATVLQTLFEDYVHSSEETVSGAKKALQSFIRAYATYPRELKHIFHIRL 639
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+HLGH AKSF LRDAP + K K LK + K +S KQR + + SE+
Sbjct: 640 LHLGHMAKSFGLRDAPKNLCASAMKKKKANLKRPDLQRKKTQS-KQR---LAEILRSEYA 695
Query: 923 SGL 925
SG+
Sbjct: 696 SGM 698
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 196/331 (59%), Gaps = 51/331 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 151 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMQSKIQRGDGPYA 210
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 211 LILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 270
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F ++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT
Sbjct: 271 DHIKSTKNIHFRQIRWLILDEADRILDLGFEKDLTVILNAVNAECQERQNVLLSATLTEG 330
Query: 181 TCWCKHTETLKFSKVEHLVLDE--ADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+++ + L + + +LD+ ++ E L+ PQ
Sbjct: 331 V-----------ARLADISLHDPVSISVLDESHDVSSPESEAFLEASPPQ---------- 369
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
+TD D IP L+QH +V P KLRLV LA+FIL
Sbjct: 370 ----------------------ATD---ELDGFAIPAGLEQHVVVVPSKLRLVCLAAFIL 404
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELL 329
KC+ + + K++VF ++ ++ ++H L
Sbjct: 405 QKCKF---ERDQKVIVFFSSCELVEFHYTLF 432
>gi|156120421|ref|NP_001095356.1| probable ATP-dependent RNA helicase DDX31 [Bos taurus]
gi|151554183|gb|AAI49183.1| DDX31 protein [Bos taurus]
Length = 734
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/603 (43%), Positives = 370/603 (61%), Gaps = 47/603 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP +P +K V E +F +++ +HP + +N + ++ +T+VQ+
Sbjct: 104 SSLFKNNPEIPELPRPVVKQVQEKVFTSDAFQAL-DLHPHLISTINTVLKMSSMTSVQKQ 162
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA+I++PTRELALQ
Sbjct: 163 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMQSKIQRGDGPYALILVPTRELALQ 222
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 223 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 282
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 283 QIRWLILDEADRILDLGFEKDLTVILNAVNAECQERQNVLLSATLTEGVARLADISLHDP 342
Query: 602 IQIDAAD-STDIH----------------NTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D+ + D IP L+QH +V P KLRLV LA+F
Sbjct: 343 VSISVLDESHDVSSPESEAFLEASPPQATDELDGFAIPAGLEQHVVVVPSKLRLVCLAAF 402
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYH-TELLSTVLGENIA--------------FFK 689
IL KC+ + + K++VF ++ ++ ++H T L T+L + A F +
Sbjct: 403 ILQKCKF---ERDQKVIVFFSSCELVEFHYTLFLQTLLSGSGALAPEHLPSTSTPLKFLR 459
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LH ++ Q ERT VF+ F K+G+L CTD+AARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 460 LHSALEQEERTAVFQDFTHSKTGILFCTDIAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 519
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + E+K++D L L + G
Sbjct: 520 RTARIGCHGSSLLVLAPSEAEYVNSLASHKINVSEVKMEDILSVLTKDDCFKGRRGGSQK 579
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S++R YA+Y ++L+HIF+ +
Sbjct: 580 SRAAGPQEIRERATVLQTLFEDYVHSSEETVSGAKKALQSFIRAYATYPRELKHIFHIRL 639
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+HLGH AKSF LRDAP + K K LK + K +S KQR + + SE+
Sbjct: 640 LHLGHMAKSFGLRDAPKNLCASAMKKKKANLKRPDLQRKKTQS-KQR---LAEILRSEYA 695
Query: 923 SGL 925
SG+
Sbjct: 696 SGM 698
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 196/331 (59%), Gaps = 51/331 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 151 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMQSKIQRGDGPYA 210
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 211 LILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 270
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F ++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT
Sbjct: 271 DHIKSTKNIHFRQIRWLILDEADRILDLGFEKDLTVILNAVNAECQERQNVLLSATLTEG 330
Query: 181 TCWCKHTETLKFSKVEHLVLDE--ADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+++ + L + + +LD+ ++ E L+ PQ
Sbjct: 331 V-----------ARLADISLHDPVSISVLDESHDVSSPESEAFLEASPPQ---------- 369
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
+TD D IP L+QH +V P KLRLV LA+FIL
Sbjct: 370 ----------------------ATD---ELDGFAIPAGLEQHVVVVPSKLRLVCLAAFIL 404
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELL 329
KC+ + + K++VF ++ ++ ++H L
Sbjct: 405 QKCKF---ERDQKVIVFFSSCELVEFHYTLF 432
>gi|326930446|ref|XP_003211358.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Meleagris gallopavo]
Length = 706
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 267/607 (43%), Positives = 370/607 (60%), Gaps = 53/607 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + + ++ V E +F S+ + +HP + ++ + I +T+VQ+
Sbjct: 85 SSLFKNNPDIPEIHRKAVQQVQENVFTTDSFSQL-DLHPHLIATISTVLKIHSMTSVQKR 143
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I +L G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRELALQ
Sbjct: 144 TIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMKSKIQRSDGPYALVLVPTRELALQ 203
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
T + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K TE + F
Sbjct: 204 TFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTECIHFR 263
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+ + L++DEADRILD G+E+D+ L L + Q++LLSATLT V RLA ++L +P
Sbjct: 264 RTQWLIIDEADRILDLGFEKDVTVILNALNAVRETRQNVLLSATLTEGVTRLADISLNDP 323
Query: 602 IQIDAAD---------------STDIHNTTD--SLVIPDSLKQHFIVTPPKLRLVALASF 644
I+I AD + N D + +P+ LKQ+F++ P KLRLV LA+F
Sbjct: 324 IRISIADEVQKSLKPALQIEKEANGSSNCMDQENFAVPEKLKQYFVMVPSKLRLVTLAAF 383
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL-GE-------------NIAFFKL 690
IL KC +++ KM++F ++ + ++H ELL VL GE + F +L
Sbjct: 384 ILEKCMY---EKQRKMIIFFSSCEQVEFHYELLVNVLSGELSEQPKRSPVSSVQLQFLRL 440
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG+M Q ERTEVF+ F +G+L+CTDVAARGLDLP V WIVQY AP+S +Y+HR+GR
Sbjct: 441 HGNMEQEERTEVFQEFLKSNTGILLCTDVAARGLDLPQVMWIVQYNAPASPAEYIHRIGR 500
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
TAR+G G+SLL L PSE + V L + +I + E+K++ L +L M+ D RL
Sbjct: 501 TARIGCHGNSLLVLAPSEAEYVSLLASHKINVSEMKMEKVLSSL----MKDDRFRLHRPG 556
Query: 811 -----------VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
V AT LQ FE+ V + A K S++ Y +Y + L+HIF+
Sbjct: 557 SKKSSVVDPQEVRERATVLQTKFENYVHSSEGTIRWAKKALQSFLCAYTAYPRSLKHIFH 616
Query: 860 FKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML- 918
K IHLGH AKSF LRDAP ++ + P + K K A + K G ++L
Sbjct: 617 IKSIHLGHVAKSFGLRDAPQNLTTL--PTANSKKKTKPRAKRSDLLKKTHGKHRLAEILR 674
Query: 919 SEFDSGL 925
SE+ SG+
Sbjct: 675 SEYSSGM 681
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 202/329 (61%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ I +T+VQ+ +I +L G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 132 LKIHSMTSVQKRTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMKSKIQRSDGPYA 191
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQT + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 192 LVLVPTRELALQTFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 251
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K TE + F + + L++DEADRILD G+E+D+ L L + Q++LLSATLT
Sbjct: 252 DHIKSTECIHFRRTQWLIIDEADRILDLGFEKDVTVILNALNAVRETRQNVLLSATLTEG 311
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+++ + L++ RI IA+ E+ K KP Q
Sbjct: 312 V-----------TRLADISLNDPIRI-------SIAD--EVQKSLKPALQ---------- 341
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
I+ +A S++ + ++ +P+ LKQ+F++ P KLRLV LA+FIL K
Sbjct: 342 -------------IEKEANGSSNCMD-QENFAVPEKLKQYFVMVPSKLRLVTLAAFILEK 387
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C +++ KM++F ++ + ++H ELL
Sbjct: 388 CMY---EKQRKMIIFFSSCEQVEFHYELL 413
>gi|254675193|ref|NP_001028466.2| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [Mus musculus]
gi|127799123|gb|AAH66017.2| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [Mus musculus]
gi|148676452|gb|EDL08399.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [Mus musculus]
gi|161899636|gb|AAI32352.2| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 [Mus musculus]
Length = 687
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/551 (45%), Positives = 353/551 (64%), Gaps = 34/551 (6%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + + +K E +F+P +++E +HP + +N + ++ +T+VQ+
Sbjct: 75 SSLFKNNPEIPELHSTVVKQAREQVFSPEAFQEL-DLHPHLISTINTVLKMSSMTSVQKQ 133
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY +P++Q LQ + KI R DG YA++++PTRELALQ
Sbjct: 134 SIPVLLEGRDALVRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYALVLVPTRELALQ 193
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ L F+
Sbjct: 194 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNLHFN 253
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L++DEADRILD G+E+DI L + + + Q++LLSATLT V RL ++L NP
Sbjct: 254 RIRWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLVDISLHNP 313
Query: 602 IQIDAADSTDIHNTT--------DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
+ I D +S IP+SL QH ++ P KLRLV LA+FIL KC+
Sbjct: 314 VSISVLDKNCNQPNPKEVASIQLNSFAIPESLDQHVVLVPSKLRLVCLAAFILQKCKF-- 371
Query: 654 EDEESKMLVFMATQDMADYHTEL-LSTVLGEN--------------IAFFKLHGSMSQSE 698
++ KM+VF ++ ++ ++H L L T+L + + F +LHG+M Q E
Sbjct: 372 -EKNQKMIVFFSSCELVEFHYSLFLHTLLCHSGTPTSEHLPSASWPLKFLRLHGNMEQEE 430
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
RT VF F ++GVL+CTDVA+RGLDLP V WIVQY+APSS +Y+HR+GRTAR+G G
Sbjct: 431 RTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRIGRTARIGCHG 490
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLSRLADG--NV 811
SSLL L PSE + V L + +I + EIK++D L + + G A G +
Sbjct: 491 SSLLILAPSEAEYVNSLASHKINVGEIKMEDILAVLAKDDCFKRRQRGAQKSRASGPQEI 550
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
AT LQ FE V + + + A K S++R YA+Y K+L+ IF+ + +HLGH AKS
Sbjct: 551 RERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRALHLGHVAKS 610
Query: 872 FALRDAPSVIS 882
F LRDAP +S
Sbjct: 611 FGLRDAPRNLS 621
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 193/329 (58%), Gaps = 56/329 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY +P++Q LQ + KI R DG YA
Sbjct: 122 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVVQSLQALTSKIQRSDGPYA 181
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 182 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ L F+++ L++DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 242 DHIKSTKNLHFNRIRWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLT-- 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+ R++D + P SVL P
Sbjct: 300 --------------------EGVTRLVD-------------ISLHNPVSISVLDKNCNQP 326
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ +A + L +S IP+SL QH ++ P KLRLV LA+FIL K
Sbjct: 327 NPKEVASIQL------------------NSFAIPESLDQHVVLVPSKLRLVCLAAFILQK 368
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ ++ KM+VF ++ ++ ++H L
Sbjct: 369 CKF---EKNQKMIVFFSSCELVEFHYSLF 394
>gi|395844567|ref|XP_003804107.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX31, partial [Otolemur garnettii]
Length = 773
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/635 (42%), Positives = 386/635 (60%), Gaps = 69/635 (10%)
Query: 339 KEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGI 398
K+Y++ ++ +K +K+ SSLF+NNP+IP + +K V E +F ++ E G+
Sbjct: 113 KKYSLSTNDRNQEEKRCIKT---SSLFKNNPEIPELHRPVVKQVQEKVFTSAAFHEL-GL 168
Query: 399 HPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
HP + +N + ++ +T VQ+ +I +L+G D LVRSQTGSGKTLAY IP++Q LQ ++
Sbjct: 169 HPHLISTINTVLKMSSMTRVQKQTIPALLEGRDALVRSQTGSGKTLAYCIPVVQSLQGVQ 228
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 518
KI R DG YA++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI
Sbjct: 229 SKIQRSDGPYALVLVPTRELALQSFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGI 288
Query: 519 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 578
+IL++TPGRL+DH K T+ + F+++ L+ DEADRILD G+E+DI L + + + Q
Sbjct: 289 NILISTPGRLVDHIKSTKNIHFNRIRWLIFDEADRILDLGFEKDITVILNAVNAECQKRQ 348
Query: 579 SILLSATLTPAVQRLAGMTLQNPIQIDA-ADSTDIHN-------------TTDSL---VI 621
++LLSATLT V RLA ++L NP+ I +S D N T D L I
Sbjct: 349 NVLLSATLTEGVTRLADISLHNPVTIAVLGESCDQCNPKGKVVQEVSPLQTGDKLGGFAI 408
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL---- 677
P SL QH + P KLRLV+LA+FIL KC+ +++ KM++F ++ ++ ++H L
Sbjct: 409 PGSLDQHVALVPSKLRLVSLAAFILQKCKF---EKDQKMIIFFSSCELVEFHYNLFLQTL 465
Query: 678 -----STVLGE------NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
+ LG+ + F +LHG+M Q ERT VF+ F K GVL+CTDVAARGLDL
Sbjct: 466 LSSPGAPALGQLPSASARLKFLRLHGNMEQEERTAVFQEFSHSKRGVLLCTDVAARGLDL 525
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
P V WIVQY APSS +Y+HR+GRTAR+G GSSLL L PSE + V L + +I I EIK
Sbjct: 526 PQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINISEIK 585
Query: 787 LKDCLQNLLSVK-MEGDLSR------LADGNVETAATALQMSFESAVLQQKILHTSACKG 839
++D L L +G L R + ++ AT LQ FE V + + A K
Sbjct: 586 VEDILSVLTRDDCFQGRLWRNQKSHAVGPQHIREQATVLQTIFEDYVHSSEKRVSWAKKA 645
Query: 840 YTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMA 899
S++R YA+Y ++L+HIF+ + +HLGH AKSF LRDAP ++ A
Sbjct: 646 LQSFIRAYATYPRELKHIFHVRFLHLGHVAKSFGLRDAPQNLN--------------VSA 691
Query: 900 INKEKSFKQRGNFSKKQ---------MLSEFDSGL 925
I K+K+ ++R + KK + SE+ SGL
Sbjct: 692 IKKKKANQKRPDLPKKTQSKRHLAEILRSEYSSGL 726
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 189/331 (57%), Gaps = 51/331 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T VQ+ +I +L+G D LVRSQTGSGKTLAY IP++Q LQ ++ KI R DG YA
Sbjct: 180 LKMSSMTRVQKQTIPALLEGRDALVRSQTGSGKTLAYCIPVVQSLQGVQSKIQRSDGPYA 239
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 240 LVLVPTRELALQSFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 299
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F+++ L+ DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 300 DHIKSTKNIHFNRIRWLIFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLT-- 357
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYER--DIAEFLEILKKQKPQFQSVLLSATL 238
+ R+ D IA E + P+ + V + L
Sbjct: 358 --------------------EGVTRLADISLHNPVTIAVLGESCDQCNPKGKVVQEVSPL 397
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
+L G + S D H ++P L+ LV+LA+FIL
Sbjct: 398 QTG-DKLGGFAI--------PGSLDQHVA----LVPSKLR-----------LVSLAAFIL 433
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELL 329
KC+ +++ KM++F ++ ++ ++H L
Sbjct: 434 QKCKF---EKDQKMIIFFSSCELVEFHYNLF 461
>gi|432116565|gb|ELK37358.1| Putative ATP-dependent RNA helicase DDX31 [Myotis davidii]
Length = 714
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/634 (43%), Positives = 371/634 (58%), Gaps = 78/634 (12%)
Query: 352 KKTEVKSG-PISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGM 410
K E K G SSLF+NNP+IP +P +K V E +F+ ++ E +HP + LN +
Sbjct: 64 KSQEQKPGVKTSSLFKNNPEIPELPRPEVKQVQEKVFSSDAFHEL-DLHPHLISTLNTVL 122
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
NI +T+VQ+ I +L G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA+
Sbjct: 123 NIFHMTSVQKQRIPALLQGRDALVRSQTGSGKTLAYCIPVVQSLQAMKTKIQRGDGPYAL 182
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
+++PTRELALQ+ + F KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+D
Sbjct: 183 VLVPTRELALQSFDTFQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVD 242
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H K T+ + F+++ LVLDEADRILD G+E+ I L + + + Q++LLSATLT V
Sbjct: 243 HIKSTKNIHFNRIRWLVLDEADRILDLGFEKTITVILNAINAECQERQNVLLSATLTEGV 302
Query: 591 QRLAGMTLQNPIQIDAADST--------------------------------DIHNTTDS 618
RLA ++L NP+ I D++ D + D
Sbjct: 303 TRLADISLHNPVSISVLDNSFGQPYLTDEESSDDSDSLSDDDYDDDDDDDDDDDDDELDG 362
Query: 619 LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 678
IP+ L+Q+ ++ P KLRLV LA+FIL KC+ + + K++VF ++ ++ ++H L
Sbjct: 363 FAIPEGLEQYVVLVPSKLRLVCLAAFILQKCKF---ETDQKLIVFFSSCELVEFHYHLFF 419
Query: 679 TVL------------GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
L G + F +LHG+M Q ERT VF+ F GVL CTDVAARGLDL
Sbjct: 420 QTLLGGAASGQLPSGGPRLTFLRLHGNMDQEERTAVFREFAQAGPGVLFCTDVAARGLDL 479
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
P V WIVQY APSS+ +Y+HR+GRTAR+G GSSLLFL PSE + V L + +I E+K
Sbjct: 480 PQVTWIVQYNAPSSAAEYIHRIGRTARIGCHGSSLLFLAPSEAEYVSSLASHKINTSEMK 539
Query: 787 LKDCLQNL-----LSVKMEGDLSRLADGNVETA--ATALQMSFESAVLQQKILHTSACKG 839
+ D L L + G A G ET AT LQ FE V +C+G
Sbjct: 540 MDDILSVLTRDDSFQARRGGGQQPQAVGPQETQERATVLQTVFEDYV--------HSCEG 591
Query: 840 YTSW--------VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKE 891
+W +R YA+Y + L+HIF+ + +HLGH AKSF LRDAP +G P K+
Sbjct: 592 TVAWAKRALQSFIRAYATYPRSLKHIFHIRLLHLGHVAKSFGLRDAP---QNLGGPTVKK 648
Query: 892 ELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGL 925
N K + ++ +Q + + SE+ SGL
Sbjct: 649 RKVNVKRPDLRRRAQQQH---LAEALRSEYASGL 679
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 135/178 (75%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+NI +T+VQ+ I +L G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 122 LNIFHMTSVQKQRIPALLQGRDALVRSQTGSGKTLAYCIPVVQSLQAMKTKIQRGDGPYA 181
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + F KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 182 LVLVPTRELALQSFDTFQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K T+ + F+++ LVLDEADRILD G+E+ I L + + + Q++LLSATLT
Sbjct: 242 DHIKSTKNIHFNRIRWLVLDEADRILDLGFEKTITVILNAINAECQERQNVLLSATLT 299
>gi|18859659|ref|NP_573214.1| CG8611, isoform A [Drosophila melanogaster]
gi|5052508|gb|AAD38584.1|AF145609_1 BcDNA.GH02833 [Drosophila melanogaster]
gi|22832445|gb|AAF48727.2| CG8611, isoform A [Drosophila melanogaster]
Length = 974
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/563 (44%), Positives = 359/563 (63%), Gaps = 70/563 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F + G+HP KNL + ++I ++T+VQQ +I +L G DVLVRS
Sbjct: 313 RAVKPVKETIFTGSKISTL-GLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRS 371
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 372 QTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWI 431
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+IL+ TPGRL+DH HT + K +K++ L+LDEADR+L+
Sbjct: 432 VPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLE 491
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL+NP+ ID +D
Sbjct: 492 LGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSD 551
Query: 609 --------STDIH--------------------NTTDSLVIPDSLKQHFIVTPPKLRLVA 640
S D + + T L IP++L+ ++V PPKLRLVA
Sbjct: 552 EAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 611
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG------------------ 682
L+S + + ++ K +VFM+T +M ++H ++L+ L
Sbjct: 612 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDD 669
Query: 683 ------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
+ + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQYT
Sbjct: 670 GDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYT 729
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 730 PPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLP 789
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ D +R V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+
Sbjct: 790 ---KDDEAR----TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKP 842
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++APS
Sbjct: 843 IFNVRIAHMGHFAKSFALKEAPS 865
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 205/338 (60%), Gaps = 43/338 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A
Sbjct: 345 LSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLA 404
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+ TPGRL+
Sbjct: 405 LVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLV 464
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSIL 172
DH HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+ PQ Q +L
Sbjct: 465 DHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRML 524
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
LSATLT TLK L +D +D E K K +Q
Sbjct: 525 LSATLTSQVQQLAGL-TLK----NPLYIDNSD------------EAASAALKSKDGYQKE 567
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
+ A L ++D + T L IP++L+ ++V PPKLRLVA
Sbjct: 568 TIEALL----------------EVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 611
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
L+S + + ++ K +VFM+T +M ++H ++L+
Sbjct: 612 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLN 647
>gi|28571338|ref|NP_788922.1| CG8611, isoform B [Drosophila melanogaster]
gi|74860578|sp|Q86B47.1|Y8611_DROME RecName: Full=Probable ATP-dependent RNA helicase CG8611
gi|28381641|gb|AAO41693.1| CG8611, isoform B [Drosophila melanogaster]
Length = 975
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/563 (44%), Positives = 359/563 (63%), Gaps = 70/563 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F + G+HP KNL + ++I ++T+VQQ +I +L G DVLVRS
Sbjct: 314 RAVKPVKETIFTGSKISTL-GLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRS 372
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 373 QTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWI 432
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+IL+ TPGRL+DH HT + K +K++ L+LDEADR+L+
Sbjct: 433 VPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLE 492
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL+NP+ ID +D
Sbjct: 493 LGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSD 552
Query: 609 --------STDIH--------------------NTTDSLVIPDSLKQHFIVTPPKLRLVA 640
S D + + T L IP++L+ ++V PPKLRLVA
Sbjct: 553 EAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 612
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG------------------ 682
L+S + + ++ K +VFM+T +M ++H ++L+ L
Sbjct: 613 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDD 670
Query: 683 ------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
+ + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQYT
Sbjct: 671 GDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYT 730
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 731 PPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLP 790
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ D +R V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+
Sbjct: 791 ---KDDEAR----TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKP 843
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++APS
Sbjct: 844 IFNVRIAHMGHFAKSFALKEAPS 866
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 205/338 (60%), Gaps = 43/338 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A
Sbjct: 346 LSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLA 405
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+ TPGRL+
Sbjct: 406 LVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLV 465
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSIL 172
DH HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+ PQ Q +L
Sbjct: 466 DHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRML 525
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
LSATLT TLK L +D +D E K K +Q
Sbjct: 526 LSATLTSQVQQLAGL-TLK----NPLYIDNSD------------EAASAALKSKDGYQKE 568
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
+ A L ++D + T L IP++L+ ++V PPKLRLVA
Sbjct: 569 TIEALL----------------EVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 612
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
L+S + + ++ K +VFM+T +M ++H ++L+
Sbjct: 613 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLN 648
>gi|323301250|gb|ADX35967.1| LD47310p [Drosophila melanogaster]
Length = 990
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/563 (44%), Positives = 359/563 (63%), Gaps = 70/563 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F + G+HP KNL + ++I ++T+VQQ +I +L G DVLVRS
Sbjct: 329 RAVKPVKETIFTGSKISTL-GLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRS 387
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 388 QTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWI 447
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+IL+ TPGRL+DH HT + K +K++ L+LDEADR+L+
Sbjct: 448 VPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLE 507
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL+NP+ ID +D
Sbjct: 508 LGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSD 567
Query: 609 --------STDIH--------------------NTTDSLVIPDSLKQHFIVTPPKLRLVA 640
S D + + T L IP++L+ ++V PPKLRLVA
Sbjct: 568 EAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 627
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG------------------ 682
L+S + + ++ K +VFM+T +M ++H ++L+ L
Sbjct: 628 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDD 685
Query: 683 ------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
+ + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQYT
Sbjct: 686 GDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYT 745
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 746 PPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLP 805
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ D +R V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+
Sbjct: 806 ---KDDEAR----TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKP 858
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++APS
Sbjct: 859 IFNVRIAHMGHFAKSFALKEAPS 881
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 205/338 (60%), Gaps = 43/338 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A
Sbjct: 361 LSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLA 420
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+ TPGRL+
Sbjct: 421 LVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLV 480
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSIL 172
DH HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+ PQ Q +L
Sbjct: 481 DHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRML 540
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
LSATLT TLK L +D +D E K K +Q
Sbjct: 541 LSATLTSQVQQLAGL-TLK----NPLYIDNSD------------EAASAALKSKDGYQKE 583
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
+ A L ++D + T L IP++L+ ++V PPKLRLVA
Sbjct: 584 TIEALL----------------EVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 627
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
L+S + + ++ K +VFM+T +M ++H ++L+
Sbjct: 628 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLN 663
>gi|149039175|gb|EDL93395.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 (predicted) [Rattus
norvegicus]
Length = 682
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/547 (46%), Positives = 353/547 (64%), Gaps = 34/547 (6%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K E +F+P +++E +HP + +N + ++ +T+VQ+
Sbjct: 75 SSLFKNNPEIPELHRTVVKQAREQVFSPEAFQEL-DLHPHLISTINTVLKMSSMTSVQKQ 133
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA++++PTRELALQ
Sbjct: 134 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVPTRELALQ 193
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F+
Sbjct: 194 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFN 253
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+V LV+DEADRILD G+E+D+ L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 254 RVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHNP 313
Query: 602 IQIDAAD-STDIHNTT-------DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
+ I D S D N DS IP+SL Q+ ++ P KLRLV LA+FIL KC+
Sbjct: 314 VSISVLDKSWDQPNPKEVASIQLDSFAIPESLDQYVVLVPSKLRLVCLAAFILKKCKF-- 371
Query: 654 EDEESKMLVFMATQDMADYHTEL-LSTVLGEN--------------IAFFKLHGSMSQSE 698
+++ KM+VF ++ ++ ++H L L T+L + + F +LHG+M Q E
Sbjct: 372 -EKDQKMIVFFSSCELVEFHYNLFLHTLLCHSGTPASETLPSASWPLKFLRLHGNMKQEE 430
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
RT VF F +GVL+CTDVA+RGLDLP V WIVQY+APS+ +Y+HR+GRTAR+G G
Sbjct: 431 RTSVFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEYIHRIGRTARIGCHG 490
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLSRLADG--NV 811
SSLL L PSE + V L + +I + EIKL+ L + + G A G +
Sbjct: 491 SSLLILAPSEAEYVNSLASHKINVSEIKLEGILAVLAKDDCFKRRQRGAQRSHATGPQEI 550
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
AT LQ FE V + + + A K S++R YA+Y K+L+ IF+ + +HLGH AKS
Sbjct: 551 RERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRSLHLGHVAKS 610
Query: 872 FALRDAP 878
F LRDAP
Sbjct: 611 FGLRDAP 617
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 194/329 (58%), Gaps = 56/329 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA
Sbjct: 122 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYA 181
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 182 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F++V LV+DEADRILD G+E+D+ L + + + Q++LLSATLT
Sbjct: 242 DHIKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLT-- 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+G R L + P SVL + P
Sbjct: 300 ----------------------------EGVTR-----LADISLHNPVSISVLDKSWDQP 326
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ +A + L DS IP+SL Q+ ++ P KLRLV LA+FIL K
Sbjct: 327 NPKEVASIQL------------------DSFAIPESLDQYVVLVPSKLRLVCLAAFILKK 368
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 369 CKF---EKDQKMIVFFSSCELVEFHYNLF 394
>gi|170016030|ref|NP_001101294.2| probable ATP-dependent RNA helicase DDX31 [Rattus norvegicus]
gi|169642287|gb|AAI60917.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Rattus norvegicus]
Length = 682
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/547 (46%), Positives = 353/547 (64%), Gaps = 34/547 (6%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K E +F+P +++E +HP + +N + ++ +T+VQ+
Sbjct: 75 SSLFKNNPEIPELHRTVVKQAREQVFSPEAFQEL-DLHPHLISTINTVLKMSSMTSVQKQ 133
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA++++PTRELALQ
Sbjct: 134 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVPTRELALQ 193
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F+
Sbjct: 194 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFN 253
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+V LV+DEADRILD G+E+D+ L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 254 RVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHNP 313
Query: 602 IQIDAAD-STDIHNTT-------DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
+ I D S D N DS IP+SL Q+ ++ P KLRLV LA+FIL KC+
Sbjct: 314 VSISVLDKSWDQPNPKEVASIQLDSFAIPESLDQYVVLVPSKLRLVCLAAFILKKCKF-- 371
Query: 654 EDEESKMLVFMATQDMADYHTEL-LSTVLGEN--------------IAFFKLHGSMSQSE 698
+++ KM+VF ++ ++ ++H L L T+L + + F +LHG+M Q E
Sbjct: 372 -EKDQKMIVFFSSCELVEFHYNLFLHTLLCHSGTPASETLPSASWPLKFLRLHGNMKQEE 430
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
RT VF F +GVL+CTDVA+RGLDLP V WIVQY+APS+ +Y+HR+GRTAR+G G
Sbjct: 431 RTSVFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEYIHRIGRTARIGCHG 490
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLSRLADG--NV 811
SSLL L PSE + V L + +I + EIKL+ L + + G A G +
Sbjct: 491 SSLLILAPSEAEYVNSLASHKINVSEIKLEGILAVLAKDDCFKRRQRGAQRSHATGPQEI 550
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
AT LQ FE V + + + A K S++R YA+Y K+L+ IF+ + +HLGH AKS
Sbjct: 551 RERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRSLHLGHVAKS 610
Query: 872 FALRDAP 878
F LRDAP
Sbjct: 611 FGLRDAP 617
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 194/329 (58%), Gaps = 56/329 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ + KI R DG YA
Sbjct: 122 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYA 181
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 182 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F++V LV+DEADRILD G+E+D+ L + + + Q++LLSATLT
Sbjct: 242 DHIKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLT-- 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+G R L + P SVL + P
Sbjct: 300 ----------------------------EGVTR-----LADISLHNPVSISVLDKSWDQP 326
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ +A + L DS IP+SL Q+ ++ P KLRLV LA+FIL K
Sbjct: 327 NPKEVASIQL------------------DSFAIPESLDQYVVLVPSKLRLVCLAAFILKK 368
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 369 CKF---EKDQKMIVFFSSCELVEFHYNLF 394
>gi|157118927|ref|XP_001659252.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875535|gb|EAT39760.1| AAEL008463-PA [Aedes aegypti]
Length = 792
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/575 (43%), Positives = 363/575 (63%), Gaps = 55/575 (9%)
Query: 352 KKTEVKSGPISSLFQN-NPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGM 410
K EVK S++F D+P V + P++E +F+ + + IHP KKN+ + +
Sbjct: 115 KFAEVKKHRKSNMFDRMKHDMPKVELPEVHPLTEKVFSEVTIDSL-DIHPHSKKNIADLL 173
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ +T VQ LSI ILDG DVL+R+QTGSGKTLAYA+P++++L K+SR DGI AV
Sbjct: 174 HFKHLTVVQNLSIPKILDGKDVLIRAQTGSGKTLAYALPLVERLHSQEVKVSRSDGILAV 233
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
+I+PTRELALQT E+F KL K +TWIV +L+GGEK K+EKAR+R G++IL++TPGR D
Sbjct: 234 VIVPTRELALQTYELFVKLLKPYTWIVSGYLSGGEKRKAEKARLRAGLNILISTPGRFCD 293
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ----FQSILLSATL 586
H K+TE++K S V++L+LDEADR+L+ GYE+D+ E +E +K+ + Q++LLSATL
Sbjct: 294 HLKNTESMKMSAVKYLILDEADRLLELGYEKDVKEIVESIKENRKDDDSPIQTVLLSATL 353
Query: 587 TPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 640
T +V+ LAG+TL+NP +D +D ++ + + + IP +++Q +IV PPKLRLV
Sbjct: 354 TSSVKELAGLTLKNPDYVDTSDIAVERRFDNVEDMEERITIPATVRQGYIVIPPKLRLVT 413
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE----------------- 683
L+ I + + +K LVFMATQDM D+H +++ VL +
Sbjct: 414 LSGVIAYEFNR----QANKCLVFMATQDMVDFHYDVMVEVLTQKRPDSDDEKDSEDEDEE 469
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARG 723
++FFKLHG M+Q ER+ VFK FR+ KS VL+CTDV ARG
Sbjct: 470 NLSVSESEPEDKSTDIILLPKVSFFKLHGKMTQIERSSVFKEFRAAKSAVLLCTDVVARG 529
Query: 724 LDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIE 783
+D+P VD ++QY AP DYVHRVGRTAR G G +LLF+ PSE++ + L ++I++
Sbjct: 530 IDVPSVDLVIQYHAPQILADYVHRVGRTARAGQSGKALLFVEPSEIQFITYLAEKQIKLA 589
Query: 784 EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSW 843
E ++ D + + V + R + N E AA LQ FE V +K L SA K + SW
Sbjct: 590 EERV-DPIFGRIGVLINSVPGR-KNKNKEQAAIELQHRFEKLVAGEKQLRESAGKAFVSW 647
Query: 844 VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
VR+Y+++ K+LR IF+ K +++GH+AK LRD P
Sbjct: 648 VRYYSNFPKELRRIFSIKAVNMGHYAKCLGLRDPP 682
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 195/333 (58%), Gaps = 63/333 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++ +T VQ LSI ILDG DVL+R+QTGSGKTLAYA+P++++L K+SR DGI A
Sbjct: 173 LHFKHLTVVQNLSIPKILDGKDVLIRAQTGSGKTLAYALPLVERLHSQEVKVSRSDGILA 232
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I+PTRELALQT E+F KL K +TWIV +L+GGEK K+EKAR+R G++IL++TPGR
Sbjct: 233 VVIVPTRELALQTYELFVKLLKPYTWIVSGYLSGGEKRKAEKARLRAGLNILISTPGRFC 292
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ----FQSILLSAT 176
DH K+TE++K S V++L+LDEADR+L+ GYE+D+ E +E +K+ + Q++LLSAT
Sbjct: 293 DHLKNTESMKMSAVKYLILDEADRLLELGYEKDVKEIVESIKENRKDDDSPIQTVLLSAT 352
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
LT + K L ++ +D +D +++ + D E +E + + + A
Sbjct: 353 LTSS---VKELAGLTLKNPDY--VDTSDIAVERRF--DNVEDME---------ERITIPA 396
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
T+ +VIP L RLV L+
Sbjct: 397 TVRQGY----------------------------IVIPPKL-----------RLVTLSGV 417
Query: 297 ILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
I + + +K LVFMATQDM D+H +++
Sbjct: 418 IAYEFNR----QANKCLVFMATQDMVDFHYDVM 446
>gi|410979402|ref|XP_003996073.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Felis catus]
Length = 717
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 266/605 (43%), Positives = 370/605 (61%), Gaps = 52/605 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F ++ + +HP + +N +N+T +T+VQ+
Sbjct: 75 SSLFKNNPEIPELHRPVVKQVQEQVFTSDAFHKL-DLHPHLISTINTVLNMTSMTSVQKQ 133
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRELALQ
Sbjct: 134 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYALVLVPTRELALQ 193
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 194 SFNTVQKLLKPFTWIVPGVLMGGERKKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 253
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADRILD G+E+DI L + + Q Q++LLSATLT V RLA ++L +P
Sbjct: 254 RIRWLILDEADRILDLGFEKDITVILNAVNAECQQRQNVLLSATLTEGVTRLADISLLDP 313
Query: 602 IQIDAAD----STDIHNTT-------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
++I D +D T DS IP SL QH + P KL+LV+LA+F
Sbjct: 314 VRISVLDQHHGQSDPERGTLPEVSPLPADDELDSFAIPGSLDQHVTLVPSKLKLVSLAAF 373
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL---------------GENIAFFK 689
IL KC+ +++ KM++F + ++ +++ L L F +
Sbjct: 374 ILQKCK---LEKDQKMIIFFLSCELVEFYYHLFLRTLPACSGAPASRQPPSASTRFKFLR 430
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q ERT VF+ F K+G+L+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 431 LHGNMEQEERTAVFEEFSHSKTGILLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 490
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-----LSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EI ++D L L L G
Sbjct: 491 RTARIGCRGSSLLILAPSEAEYVNSLASHKINVSEIHVEDILSVLTRDGCLKGSRRGTQK 550
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S++R YA+Y ++L+HIF+ +
Sbjct: 551 SRAAGPQEIRRRATVLQTVFEDYVHSSERRVSWAKKALQSFIRAYATYPRELKHIFHVRS 610
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQ-RGNFSKKQML-SE 920
+HLGH AKSF LRDAP + G+ +K +K +N+ K+ RG ++L SE
Sbjct: 611 LHLGHVAKSFGLRDAPQNL-GVS------AVKRRKGNLNRPDLHKKTRGKHRLAEILRSE 663
Query: 921 FDSGL 925
+ SG+
Sbjct: 664 YSSGI 668
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 196/329 (59%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+T +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 122 LNMTSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYA 181
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+
Sbjct: 182 LVLVPTRELALQSFNTVQKLLKPFTWIVPGVLMGGERKKSEKARLRKGINILISTPGRLV 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ L+LDEADRILD G+E+DI L + + Q Q++LLSATLT
Sbjct: 242 DHIKSTKNIHFSRIRWLILDEADRILDLGFEKDITVILNAVNAECQQRQNVLLSATLTEG 301
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
L ++ +LDQ + + E TL P
Sbjct: 302 VTRLADISLLDPVRIS---------VLDQHHGQSDPE-----------------RGTL-P 334
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
V +P+ D + DS IP SL QH + P KL+LV+LA+FIL K
Sbjct: 335 EV---------SPLPAD--------DELDSFAIPGSLDQHVTLVPSKLKLVSLAAFILQK 377
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM++F + ++ +++ L
Sbjct: 378 CK---LEKDQKMIIFFLSCELVEFYYHLF 403
>gi|426226067|ref|XP_004007176.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Ovis aries]
Length = 846
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/603 (43%), Positives = 373/603 (61%), Gaps = 47/603 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP +P ++ V E +F +++ +HP + +N + ++ +T+VQ+
Sbjct: 134 SSLFKNNPEIPELPRPVVEQVQEKVFTSDAFQAL-DLHPHLISTINTVLKMSSMTSVQKQ 192
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA+I++PTRELALQ
Sbjct: 193 SIPVLLEGRDALVRSQTGSGKTLAYCIPMVQSLQAMQSKIQRGDGPYALILVPTRELALQ 252
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 253 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 312
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 313 QIRWLILDEADRILDLGFEKDLTVILNAVNAECQERQNVLLSATLTEGVARLADISLHDP 372
Query: 602 IQIDAAD-STDIH----------------NTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D+ + DS IP L+QH +V P KLRLV LA+F
Sbjct: 373 VSISVLDESHDLSSPESEASLEASPPQATDELDSFAIPAGLEQHVVVVPSKLRLVCLAAF 432
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ + + K++VF ++ ++ ++H L L T+L ++ A F +
Sbjct: 433 ILQKCKF---ERDQKVIVFFSSCELVEFHYILFLQTLLSDSGALAPERLPATSMPLKFLR 489
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LH ++ Q ERT VF+ F K+G+L CTD+AARGLDLP V WIVQY PSS +Y+HRVG
Sbjct: 490 LHSALEQEERTAVFQDFTHSKTGILFCTDIAARGLDLPQVTWIVQYNPPSSPAEYIHRVG 549
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQ-----NLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + E+K++D L + + G
Sbjct: 550 RTARIGCHGSSLLVLAPSEAEYVNSLASHKINVSEMKMEDILSVLTKDDCFKGRRGGGQK 609
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G ++ AT LQ FE V + +SA K S++R YA+Y ++L+HIF+ +
Sbjct: 610 SRATGPQEIQERATVLQTVFEDYVHSSEETVSSAKKALQSFIRAYATYPRELKHIFHIRL 669
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+HLGH AKSF LRDAP + K K LK + K +S KQR + + SE+
Sbjct: 670 LHLGHMAKSFGLRDAPKNLCASAMKKKKANLKRPDLQRKKTQS-KQR---LAEILRSEYA 725
Query: 923 SGL 925
SG+
Sbjct: 726 SGM 728
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 196/327 (59%), Gaps = 51/327 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 181 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPMVQSLQAMQSKIQRGDGPYA 240
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 241 LILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 300
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F ++ L+LDEADRILD G+E+D+ L + + + Q++LLSATLT
Sbjct: 301 DHIKSTKNIHFRQIRWLILDEADRILDLGFEKDLTVILNAVNAECQERQNVLLSATLTEG 360
Query: 181 TCWCKHTETLKFSKVEHLVLDE--ADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+++ + L + + +LD+ ++ E L+ PQ
Sbjct: 361 V-----------ARLADISLHDPVSISVLDESHDLSSPESEASLEASPPQ---------- 399
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
+TD DS IP L+QH +V P KLRLV LA+FIL
Sbjct: 400 ----------------------ATD---ELDSFAIPAGLEQHVVVVPSKLRLVCLAAFIL 434
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYH 325
KC+ + + K++VF ++ ++ ++H
Sbjct: 435 QKCKF---ERDQKVIVFFSSCELVEFH 458
>gi|194767109|ref|XP_001965661.1| GF22616 [Drosophila ananassae]
gi|190619652|gb|EDV35176.1| GF22616 [Drosophila ananassae]
Length = 921
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/563 (44%), Positives = 355/563 (63%), Gaps = 70/563 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F G+H KNL + ++I ++TTVQQ +I PIL+ DVLVRS
Sbjct: 255 RAVKPVKETIFTGAKIASL-GLHAHAVKNLEDLLSIRELTTVQQKAIPPILERKDVLVRS 313
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 314 QTGSGKTLAYALPLVEILQKQQPRIQRKDGVLALVIVPTRELVMQTYELLQKLVKPYTWI 373
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+ILV TPGRL+DH HT + + ++++ LVLDEADR+L+
Sbjct: 374 VPGSLLGGESRKSEKARLRKGINILVGTPGRLVDHLLHTASFRLTRLQFLVLDEADRLLE 433
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL++P+ ID +D
Sbjct: 434 LGYERDVKQLVEAIDKQRSEAEQKDLPQLQRLLLSATLTSQVQQLAGLTLKDPLYIDNSD 493
Query: 609 --------STDIH---------------------NTTDSLVIPDSLKQHFIVTPPKLRLV 639
S D + + T L IP++L+ ++V PPKLRLV
Sbjct: 494 EAASLALKSKDGYQKESIEAQLGVEEDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLV 553
Query: 640 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENI-------------- 685
AL+S + + + ++ K +VFM+T +M ++H ++L+ L +
Sbjct: 554 ALSSLLAKEVE--ASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEKDDEEEDD 611
Query: 686 ---------AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P V +VQYT
Sbjct: 612 GEEPLLPGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDVKLVVQYT 671
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 672 PPQTTADFVHRVGRTARAGRKGRAVLFLAPSESQFVRHLEKKRIRIQQGDMYAYLQALLP 731
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
E V+ AA+ LQ F+S + + LH +CK + SW++FY+++ K+L+
Sbjct: 732 KDEEAK-------TVQEAASNLQHKFQSLLEDDRELHDKSCKAFVSWMKFYSTFPKELKP 784
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++AP+
Sbjct: 785 IFNVRIAHMGHFAKSFALKEAPT 807
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 210/367 (57%), Gaps = 100/367 (27%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++TTVQQ +I PIL+ DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A
Sbjct: 287 LSIRELTTVQQKAIPPILERKDVLVRSQTGSGKTLAYALPLVEILQKQQPRIQRKDGVLA 346
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+ILV TPGRL
Sbjct: 347 LVIVPTRELVMQTYELLQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILVGTPGRL- 405
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
V+HL+
Sbjct: 406 -------------VDHLL------------------------------------------ 410
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSV 232
HT + + ++++ LVLDEADR+L+ GYERD+ + +E + KQ+ PQ Q +
Sbjct: 411 -----HTASFRLTRLQFLVLDEADRLLELGYERDVKQLVEAIDKQRSEAEQKDLPQLQRL 465
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAAD--------STDIH------------------- 265
LLSATLT VQ+LAG+TL++P+ ID +D S D +
Sbjct: 466 LLSATLTSQVQQLAGLTLKDPLYIDNSDEAASLALKSKDGYQKESIEAQLGVEEDGLGEY 525
Query: 266 --NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMAD 323
+ T L IP++L+ ++V PPKLRLVAL+S + + + ++ K +VFM+T +M +
Sbjct: 526 QEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVE--ASPKQFKAIVFMSTTEMVN 583
Query: 324 YHTELLS 330
+H ++L+
Sbjct: 584 FHHDMLN 590
>gi|195481067|ref|XP_002101501.1| GE15594 [Drosophila yakuba]
gi|194189025|gb|EDX02609.1| GE15594 [Drosophila yakuba]
Length = 970
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/563 (43%), Positives = 356/563 (63%), Gaps = 70/563 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F + G+HP KNL + ++I ++T+VQQ +I +L G DVLVRS
Sbjct: 305 RAVKPVKETIFTGSKISTL-GLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRS 363
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 364 QTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWI 423
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+IL+ TPGRL+DH HT + K +K++ L+LDEADR+L+
Sbjct: 424 VPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLE 483
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL++P+ ID +D
Sbjct: 484 LGYERDVKQLVEAIDKQRAECEDKQLPQLQRMLLSATLTSQVQQLAGLTLKDPLYIDNSD 543
Query: 609 STDI----------------------------HNTTDSLVIPDSLKQHFIVTPPKLRLVA 640
+ T L IP++L+ ++V PPKLRLVA
Sbjct: 544 EAASAALKGKDGYQKESIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 603
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG------------------ 682
L+S + + ++ K +VFM+T +M ++H ++L+ L
Sbjct: 604 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKSDSDDD 661
Query: 683 ------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
+ + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQYT
Sbjct: 662 DDVPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYT 721
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 722 PPQTTADFVHRVGRTARAGRKGRAVLFLAPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLP 781
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ D +R V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+
Sbjct: 782 ---KDDEAR----TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKP 834
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++APS
Sbjct: 835 IFNVRIAHMGHFAKSFALKEAPS 857
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 205/366 (56%), Gaps = 99/366 (27%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A
Sbjct: 337 LSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLA 396
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+ TPGRL
Sbjct: 397 LVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRL- 455
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
V+HL+
Sbjct: 456 -------------VDHLL------------------------------------------ 460
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSV 232
HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+ PQ Q +
Sbjct: 461 -----HTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKQLPQLQRM 515
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDI---------------------------- 264
LLSATLT VQ+LAG+TL++P+ ID +D
Sbjct: 516 LLSATLTSQVQQLAGLTLKDPLYIDNSDEAASAALKGKDGYQKESIEALLEVDDGLGEYQ 575
Query: 265 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 324
+ T L IP++L+ ++V PPKLRLVAL+S + + ++ K +VFM+T +M ++
Sbjct: 576 EDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVD--ASPKQFKAIVFMSTTEMVNF 633
Query: 325 HTELLS 330
H ++L+
Sbjct: 634 HHDMLN 639
>gi|390341643|ref|XP_784918.3| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Strongylocentrotus purpuratus]
Length = 718
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/596 (42%), Positives = 356/596 (59%), Gaps = 71/596 (11%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
EA+F+ T + E P +H FM N+ + + +Q+TTVQQ +I +L G D L++SQTG+GKT
Sbjct: 107 EAIFSSTQFSELP-LHSFMISNIEKNLGFSQMTTVQQRAIPTLLHGQDTLIKSQTGTGKT 165
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LAYA+P++Q+LQ ++PK+ R G YA+I++PTRELA Q+ E KL K F WIVP L G
Sbjct: 166 LAYAVPVVQQLQGLQPKVQRLHGPYALILVPTRELACQSFETLVKLVKPFHWIVPGVLMG 225
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
GEK KSEK RIRKGI+ILV+TPGRL+DH TE L FS+V ++LDEADR+LD G+E+D+
Sbjct: 226 GEKKKSEKGRIRKGINILVSTPGRLVDHINTTEALTFSRVRWVILDEADRLLDLGFEKDV 285
Query: 564 AEFLEILKKQ-KPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD-------------- 608
L + +Q + Q Q++L+SATL+ V+RLA +TL++P+ ID A
Sbjct: 286 TTILNAINEQCQNQKQTVLVSATLSEGVKRLANITLKDPVFIDVAKHQLDKALPPAPWSA 345
Query: 609 ----------------------STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
+ + +P+ LKQ F + P KLRLVAL + +
Sbjct: 346 SSSSTEEKLRPAKTGSQTEETGEGETGEDAEMFSVPERLKQQFAIVPSKLRLVALTALVA 405
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-------------ENIAFFKLHGS 693
G KMLVF+++ + D+H L G E + F+LHGS
Sbjct: 406 G---GFKSPSGCKMLVFLSSCESVDFHYTLFQACKGCSILKEDGTASKREGMPLFRLHGS 462
Query: 694 MSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR 753
MSQ+ER +++ F + GVL+CTDVAARGLDLP V WIVQY P S+ DYVHRVGRTAR
Sbjct: 463 MSQAERIKMYHAFSEARKGVLLCTDVAARGLDLPKVKWIVQYNIPGSAADYVHRVGRTAR 522
Query: 754 VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK----MEGDLSRLADG 809
+G EG +LLFL PSEV+ + L+ ++IRI+E L D L +L++ + + G
Sbjct: 523 IGKEGQALLFLAPSEVEYIRILEEQQIRIKEQPLDDILSSLMTSEAQDFIHGQFKGQRQR 582
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
+VE AAT LQ+ +E+ VL A K + S++R YA+Y L+HI + K++HLGH A
Sbjct: 583 SVEEAATNLQLRYENHVLTNTAHTQQARKAFHSFIRAYATYPSSLKHILHIKKLHLGHAA 642
Query: 870 KSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGL 925
KSF LR+APS I + ++ + K++ N K +SEFDSGL
Sbjct: 643 KSFGLREAPSNI-------------HDRIGNTNARGTKRKQNSMKVSSVSEFDSGL 685
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 195/341 (57%), Gaps = 29/341 (8%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +Q+TTVQQ +I +L G D L++SQTG+GKTLAYA+P++Q+LQ ++PK+ R G YA
Sbjct: 132 LGFSQMTTVQQRAIPTLLHGQDTLIKSQTGTGKTLAYAVPVVQQLQGLQPKVQRLHGPYA 191
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELA Q+ E KL K F WIVP L GGEK KSEK RIRKGI+ILV+TPGRL+
Sbjct: 192 LILVPTRELACQSFETLVKLVKPFHWIVPGVLMGGEKKKSEKGRIRKGINILVSTPGRLV 251
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ-KPQFQSILLSATLTP 179
DH TE L FS+V ++LDEADR+LD G+E+D+ L + +Q + Q Q++L+SATL+
Sbjct: 252 DHINTTEALTFSRVRWVILDEADRLLDLGFEKDVTTILNAINEQCQNQKQTVLVSATLSE 311
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+ TLK + + +D A LD+ ++K L
Sbjct: 312 GVKRLANI-TLK----DPVFIDVAKHQLDKALPPAPWSASSSSTEEK-----------LR 355
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
PA + Q + + + +P+ LKQ F + P KLRLVAL + + G
Sbjct: 356 PA---------KTGSQTEETGEGETGEDAEMFSVPERLKQQFAIVPSKLRLVALTALVAG 406
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKE 340
KMLVF+++ + D+H L K LKE
Sbjct: 407 ---GFKSPSGCKMLVFLSSCESVDFHYTLFQACKGCSILKE 444
>gi|194891931|ref|XP_001977562.1| GG18185 [Drosophila erecta]
gi|190649211|gb|EDV46489.1| GG18185 [Drosophila erecta]
Length = 978
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/564 (43%), Positives = 355/564 (62%), Gaps = 72/564 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F + G+HP KNL + ++I ++T+VQQ +I +L G DVLVRS
Sbjct: 317 RAVKPVKETIFTGSKISTL-GLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRS 375
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 376 QTGSGKTLAYALPLVELLQKEQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWI 435
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+IL+ TPGRL+DH HT + K +K++ L+LDEADR+L+
Sbjct: 436 VPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTTSFKLAKLQFLILDEADRLLE 495
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL++P+ ID +D
Sbjct: 496 LGYERDVKQLVEAIDKQRAECEDKDLPQLQRMLLSATLTSQVQQLAGLTLKDPLYIDNSD 555
Query: 609 STDI----------------------------HNTTDSLVIPDSLKQHFIVTPPKLRLVA 640
+ T L IP++L+ ++V PPKLRLVA
Sbjct: 556 EAASAALKGKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 615
Query: 641 LASFILGKCQNVNED-EESKMLVFMATQDMADYHTELLSTVLG----------------- 682
L++ + + V+ ++ K +VFM+T +M ++H ++L+ L
Sbjct: 616 LSALL---AKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEAEQGDSDD 672
Query: 683 -------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
+ + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQY
Sbjct: 673 DGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQY 732
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
T P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 733 TPPQTTADFVHRVGRTARAGRKGRAVLFLAPSEAQFVRHLEKKRIRIQQGDMYAYLQTLL 792
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
E V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+
Sbjct: 793 PKDAEAR-------TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELK 845
Query: 856 HIFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++APS
Sbjct: 846 PIFNVRIAHMGHFAKSFALKEAPS 869
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 45/339 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A
Sbjct: 349 LSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKEQPRIQRKDGVLA 408
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+ TPGRL+
Sbjct: 409 LVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLV 468
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSIL 172
DH HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+ PQ Q +L
Sbjct: 469 DHLLHTTSFKLAKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKDLPQLQRML 528
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
LSATLT TLK + L +D +D E K K +Q
Sbjct: 529 LSATLTSQVQQLAGL-TLK----DPLYIDNSD------------EAASAALKGKDGYQKE 571
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
+ A L ++D + T L IP++L+ ++V PPKLRLVA
Sbjct: 572 TIEALL----------------EVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 615
Query: 293 LASFILGKCQNVNED-EESKMLVFMATQDMADYHTELLS 330
L++ + + V+ ++ K +VFM+T +M ++H ++L+
Sbjct: 616 LSALL---AKEVDASPKQFKAIVFMSTTEMVNFHHDMLN 651
>gi|363740557|ref|XP_425332.3| PREDICTED: probable ATP-dependent RNA helicase DDX31 [Gallus
gallus]
Length = 711
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/605 (43%), Positives = 371/605 (61%), Gaps = 47/605 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + + ++ V E +F S+ + +HP + + + I +T+VQ+
Sbjct: 88 SSLFRNNPDIPEIHRKAVQQVQENVFTTDSFSQL-DLHPHLIATITTVLKICSMTSVQKQ 146
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I +L G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRE+A
Sbjct: 147 TIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMQSKIQRSDGPYALVLVPTREVACT 206
Query: 482 T-LEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKF 540
+ KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K TE + F
Sbjct: 207 PDFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTECIHF 266
Query: 541 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQN 600
+ + L++DEADRILD G+E+D+ L L ++ Q++LLSATLT V RLA ++L +
Sbjct: 267 RRTQWLIIDEADRILDLGFEKDVTVILNALNAERETRQNVLLSATLTEGVTRLADISLND 326
Query: 601 PIQIDAAD-----------------STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
PI+I AD S+ ++ +P+ LKQ+F++ P KLRLV LA+
Sbjct: 327 PIRISIADEIRESLKPALQTEKEANSSSNRMDQENFAVPEKLKQYFMMVPSKLRLVTLAA 386
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL-GE--------------NIAFF 688
F+L KC+ +++ KM++F ++ + ++H ELL VL GE + F
Sbjct: 387 FVLEKCKY---EKQHKMIIFFSSCEQVEFHYELLVNVLSGELESEQPKRSSVSSVQLQFL 443
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
+LHG+M Q ERTEVF+ F K+G+L+CTDVAARGLDLP V WIVQY AP+S +Y+HR+
Sbjct: 444 RLHGNMEQEERTEVFQEFLKSKTGILLCTDVAARGLDLPQVTWIVQYNAPASPAEYIHRI 503
Query: 749 GRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS---VKMEGDLSR 805
GRTAR+G G+SLL L PSE + V L + +I + EIK++ L +L+ ++ S+
Sbjct: 504 GRTARIGCHGNSLLVLAPSEAEYVSLLASHKINVSEIKMEKVLSSLMKDDRFRLRRPGSK 563
Query: 806 LADG----NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
+ G V AT LQ FE+ V + A K S++ Y +Y + L+HIF+ K
Sbjct: 564 KSYGVDPQEVRERATVLQTQFENYVHSSEGTIRWAKKALQSFLCAYTAYPRSLKHIFHIK 623
Query: 862 QIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SE 920
IHLGH AKSF LRDAP ++ + P + K K A + K G ++L SE
Sbjct: 624 SIHLGHVAKSFGLRDAPQNLTTL--PTANSKKKTKPRAKRSDLLKKTHGKHRLAEILRSE 681
Query: 921 FDSGL 925
+ SG+
Sbjct: 682 YSSGM 686
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 198/330 (60%), Gaps = 48/330 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ I +T+VQ+ +I +L G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 135 LKICSMTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMQSKIQRSDGPYA 194
Query: 61 VIILPTRELALQT-LEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
++++PTRE+A + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL
Sbjct: 195 LVLVPTREVACTPDFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRL 254
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
+DH K TE + F + + L++DEADRILD G+E+D+ L L ++ Q++LLSATLT
Sbjct: 255 VDHIKSTECIHFRRTQWLIIDEADRILDLGFEKDVTVILNALNAERETRQNVLLSATLTE 314
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+++ + L++ RI IA+ EI + KP Q+
Sbjct: 315 GV-----------TRLADISLNDPIRI-------SIAD--EIRESLKPALQTE------- 347
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
A+S+ ++ +P+ LKQ+F++ P KLRLV LA+F+L
Sbjct: 348 -----------------KEANSSSNRMDQENFAVPEKLKQYFMMVPSKLRLVTLAAFVLE 390
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
KC+ +++ KM++F ++ + ++H ELL
Sbjct: 391 KCKY---EKQHKMIIFFSSCEQVEFHYELL 417
>gi|195351726|ref|XP_002042380.1| GM13317 [Drosophila sechellia]
gi|194124223|gb|EDW46266.1| GM13317 [Drosophila sechellia]
Length = 972
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/563 (43%), Positives = 357/563 (63%), Gaps = 70/563 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F + G+HP KNL + ++I ++T+VQQ +I +L G DVLVRS
Sbjct: 311 RAVKPVKETIFTGSKISTL-GLHPHAVKNLEDLLSIRELTSVQQKTIPQVLQGKDVLVRS 369
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I R DG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 370 QTGSGKTLAYALPLVELLQKQQPRIRRNDGVLALVIVPTRELVMQTYELMQKLVKPYTWI 429
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+IL+ T GRL+DH HT + K +K++ L+LDEADR+L+
Sbjct: 430 VPGSLLGGESRKSEKARLRKGINILIGTSGRLVDHLLHTASFKLTKLQFLILDEADRLLE 489
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL++P+ ID +D
Sbjct: 490 LGYERDVKQLVEAIDKQRADCENKDLPQLQRMLLSATLTSQVQQLAGLTLKDPLYIDNSD 549
Query: 609 --------STDIH--------------------NTTDSLVIPDSLKQHFIVTPPKLRLVA 640
S D + + T L IP++L+ ++V PPKLRLVA
Sbjct: 550 EAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 609
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG------------------ 682
L+S + + ++ K +VFM+T +M ++H ++L+ L
Sbjct: 610 LSSLLAKEVD--TSPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEDDEQEKGDSDDD 667
Query: 683 ------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
+ + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQYT
Sbjct: 668 GDIPLLQGLRFFKLHGSMTQTERQGVFRGFRECASCVLLATDVVGRGIDVPDIKLVVQYT 727
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 728 PPQTTADFVHRVGRTARAGRKGRAVLFLAPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLP 787
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ D +R V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+
Sbjct: 788 ---KDDEAR----TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKP 840
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++APS
Sbjct: 841 IFNVRIAHMGHFAKSFALKEAPS 863
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 204/338 (60%), Gaps = 43/338 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I R DG+ A
Sbjct: 343 LSIRELTSVQQKTIPQVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIRRNDGVLA 402
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+ T GRL+
Sbjct: 403 LVIVPTRELVMQTYELMQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTSGRLV 462
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSIL 172
DH HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+ PQ Q +L
Sbjct: 463 DHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRADCENKDLPQLQRML 522
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
LSATLT TLK + L +D +D E K K +Q
Sbjct: 523 LSATLTSQVQQLAGL-TLK----DPLYIDNSD------------EAASAALKSKDGYQKE 565
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
+ A L ++D + T L IP++L+ ++V PPKLRLVA
Sbjct: 566 TIEALL----------------EVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 609
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
L+S + + ++ K +VFM+T +M ++H ++L+
Sbjct: 610 LSSLLAKEVD--TSPKQFKAIVFMSTTEMVNFHHDMLN 645
>gi|147900039|ref|NP_001088376.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Xenopus laevis]
gi|54038539|gb|AAH84638.1| LOC495225 protein [Xenopus laevis]
Length = 554
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/543 (47%), Positives = 354/543 (65%), Gaps = 33/543 (6%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN+ +T+VQ+L+I +L G DVLVRSQTGSGKT+AY +P++Q LQ + PKI R DG YA
Sbjct: 1 MNMPNMTSVQKLTIPALLAGRDVLVRSQTGSGKTMAYGVPLVQALQGVTPKIQRSDGPYA 60
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++++PTRELALQ+ KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRLL
Sbjct: 61 LVLVPTRELALQSFNTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLL 120
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K T+++ F++ L++DEADRILD G+E+D+ L L Q Q++LLSATL+P
Sbjct: 121 DHIKSTKSIHFTRARWLIVDEADRILDMGFEKDVTAILNALNSQCQHRQNVLLSATLSPG 180
Query: 590 VQRLAGMTLQNPIQIDAADST------------DIHNTTDS-LVIPDSLKQHFIVTPPKL 636
V RLA ++L +P + A+ D ++ S +P+ L QH +V P KL
Sbjct: 181 VTRLADISLNDPFNVTIAEDNSREAKHGGKAKEDKKDSESSCFAMPEKLHQHAVVAPSKL 240
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL--GENIA----FFKL 690
+LV LA+FILGK + + ++KM+VF + ++ +++ LLS VL G++ F +L
Sbjct: 241 KLVTLATFILGKWKC---ERKAKMIVFFPSCELVEFYHTLLSKVLTVGDSAMGSDDFLRL 297
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG+M Q ERTEVF+ F + ++G+L+CTDVAARGLDLP V WIVQY AP+S+ +Y+HRVGR
Sbjct: 298 HGNMEQEERTEVFQQFTNCQAGILLCTDVAARGLDLPQVTWIVQYGAPASAAEYIHRVGR 357
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS------VKMEGDLS 804
TAR+G +GSSLL LIPSE ++ L +I + E+K++D L NLL + G S
Sbjct: 358 TARLGAQGSSLLILIPSEAAYLQTLAEHKISVSEMKMEDILSNLLMEDFLKIKRAGGKKS 417
Query: 805 RLAD-GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQI 863
+AD V AT LQ FE V A K S++R YA+Y K+L+HIF+ + +
Sbjct: 418 DVADPQTVRERATVLQTKFEDYVHASADTALWAKKALQSYIRSYATYPKNLKHIFHIRSL 477
Query: 864 HLGHFAKSFALRDAPSVIS-GIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
HLGH AKSF LRDAP +S + NK+ +K A ++ KQ +FS + SE+
Sbjct: 478 HLGHVAKSFGLRDAPHNLSRQLSGSLNKQSKGKQKRADTNKRRPKQ--SFS-DLLRSEYA 534
Query: 923 SGL 925
SGL
Sbjct: 535 SGL 537
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 193/330 (58%), Gaps = 51/330 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN+ +T+VQ+L+I +L G DVLVRSQTGSGKT+AY +P++Q LQ + PKI R DG YA
Sbjct: 1 MNMPNMTSVQKLTIPALLAGRDVLVRSQTGSGKTMAYGVPLVQALQGVTPKIQRSDGPYA 60
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRLL
Sbjct: 61 LVLVPTRELALQSFNTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLL 120
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+++ F++ L++DEADRILD G+E+D+ L L Q Q++LLSATL+P
Sbjct: 121 DHIKSTKSIHFTRARWLIVDEADRILDMGFEKDVTAILNALNSQCQHRQNVLLSATLSPG 180
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
V AD L+ + IAE K + +
Sbjct: 181 ------------------VTRLADISLNDPFNVTIAEDNSREAKHGGKAKE--------- 213
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D DS + +P+ L QH +V P KL+LV LA+FILGK
Sbjct: 214 ----------------DKKDS-----ESSCFAMPEKLHQHAVVAPSKLKLVTLATFILGK 252
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ + ++KM+VF + ++ +++ LLS
Sbjct: 253 WKC---ERKAKMIVFFPSCELVEFYHTLLS 279
>gi|355683281|gb|AER97073.1| DEAD box polypeptide 31 [Mustela putorius furo]
Length = 707
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/559 (45%), Positives = 349/559 (62%), Gaps = 43/559 (7%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F ++ E +HP + +N +N+T +T+VQ+
Sbjct: 71 SSLFKNNPEIPELHRPVVKQVQEEVFTSEAFHEL-DLHPHLISTINTVLNMTSMTSVQKQ 129
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRELALQ
Sbjct: 130 SIPALLEGRDALVRSQTGSGKTLAYCIPVVQTLQAMKSKIQRSDGPYALVLVPTRELALQ 189
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+DH K T+ + F
Sbjct: 190 SFDTVQKLLKPFTWIVPGVLMGGERRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFR 249
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ L+LDEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L NP
Sbjct: 250 RIRWLILDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLLNP 309
Query: 602 IQIDAADSTDIHN-----------------TTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
++I D + DS IP+SL QH + P KLRLV+LA+F
Sbjct: 310 VRISVLDEPRGQSEPQGGAVPEASLLPAGGEPDSFAIPESLHQHVALVPSKLRLVSLAAF 369
Query: 645 ILGKC---QNVNEDEESKMLVFMATQDMADYHTEL----LSTVLGE-----------NIA 686
IL Q +++ KM+VF ++ ++ ++H L L + LG +
Sbjct: 370 ILQXAFILQKCKFEKDQKMIVFFSSCELVEFHYHLFLQTLPSRLGALASGQPPSASTRLK 429
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
F +LHG+M Q ERT VF+ F K+GVL+CTDVAARGLDLP V WIVQY APSS +Y+H
Sbjct: 430 FLRLHGNMKQEERTAVFQEFSHSKTGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIH 489
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL------SVKME 800
R+GRTAR+G GSSLL L PSE + V L + +I + E+K+++ L L +
Sbjct: 490 RIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEMKMEEILSVLTRDDCFKGSRWG 549
Query: 801 GDLSRLADGN-VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
SR A + AT LQ FE V + + A K +++R YA+Y ++L+ IF+
Sbjct: 550 SQKSRAAGPQEIRERATVLQTVFEDYVHSSESRVSWAKKALQAFIRAYATYPRELKPIFH 609
Query: 860 FKQIHLGHFAKSFALRDAP 878
+ +HLGH AKSF LRDAP
Sbjct: 610 VRSLHLGHVAKSFGLRDAP 628
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 195/332 (58%), Gaps = 47/332 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+T +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 118 LNMTSMTSVQKQSIPALLEGRDALVRSQTGSGKTLAYCIPVVQTLQAMKSKIQRSDGPYA 177
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGE+ KSEKAR+RKGI+IL++TPGRL+
Sbjct: 178 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGERRKSEKARLRKGINILISTPGRLV 237
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F ++ L+LDEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 238 DHIKSTKNIHFRRIRWLILDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 297
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
L ++ VLDE + +PQ +V A+L P
Sbjct: 298 VTRLADISLLNPVRIS--VLDEPR------------------GQSEPQGGAV-PEASLLP 336
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A DS IP+SL QH + P KLRLV+LA+FIL
Sbjct: 337 A-----------------------GGEPDSFAIPESLHQHVALVPSKLRLVSLAAFILQX 373
Query: 301 C---QNVNEDEESKMLVFMATQDMADYHTELL 329
Q +++ KM+VF ++ ++ ++H L
Sbjct: 374 AFILQKCKFEKDQKMIVFFSSCELVEFHYHLF 405
>gi|345329997|ref|XP_001511356.2| PREDICTED: probable ATP-dependent RNA helicase DDX31
[Ornithorhynchus anatinus]
Length = 674
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/583 (43%), Positives = 354/583 (60%), Gaps = 72/583 (12%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + +K V E +F S++ +HP + + + ++ +T+VQ+
Sbjct: 84 SSLFKNNPEIPEINRAAVKQVQEKVFTSDSFDGL-NLHPHLVSTITSVLKMSSMTSVQKQ 142
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRELALQ
Sbjct: 143 SIPVLLEGKDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYALVLVPTRELALQ 202
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + F+
Sbjct: 203 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFN 262
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+++ LV+DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++LQNP
Sbjct: 263 RIQWLVMDEADRILDLGFEKDITVILNAVNAECEKRQNVLLSATLTEGVTRLADISLQNP 322
Query: 602 IQIDAADSTDIHNT-----------------TDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D T T ++ +P+ LKQH +V P KLRLV LA+F
Sbjct: 323 VSISVLDETQNRLTPGNKTAREAPRPPTEAEEENFAVPEKLKQHVVVVPSKLRLVTLAAF 382
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLG---------ENIAFFKLHGSM 694
ILGKC+ + KM+VF ++ ++ ++H L L +LG ++ F +LHG+M
Sbjct: 383 ILGKCKF---ESNQKMIVFFSSCELVEFHHSLFLQILLGGSQTPAPAPSHLKFLRLHGNM 439
Query: 695 SQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV 754
Q ERT VF F K+GVL+CTDVAARGLDLP V WIVQY AP+S +Y+HR+GRTAR+
Sbjct: 440 EQEERTAVFLEFSQSKTGVLLCTDVAARGLDLPQVTWIVQYNAPASPAEYIHRIGRTARI 499
Query: 755 GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL----------------------- 791
G GSSLL L PSE + V L + +I + EIK+++ L
Sbjct: 500 GCHGSSLLILAPSEAEYVNSLTSHKINVSEIKMEEILALLAMDDRFKGRRWGNKVCQFRY 559
Query: 792 ------QNLLSVKMEGDLSR-----LADGNVETAATALQMSFESAVLQQKILHTSACKGY 840
+ LL +G L L D +V+ T + ++I K
Sbjct: 560 VGFHGIKCLLHPGHDGSLGEEEGPDLGD-DVKEELTGFGDRMNVGIEIEEI------KAL 612
Query: 841 TSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
S++R YA+Y K+L+HIF+ K +HLGH AKSF LRDAP +S
Sbjct: 613 QSFIRAYATYPKNLKHIFHVKSLHLGHVAKSFGLRDAPQNLSA 655
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 198/331 (59%), Gaps = 51/331 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 131 LKMSSMTSVQKQSIPVLLEGKDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYA 190
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 191 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 250
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + F++++ LV+DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 251 DHIKSTKNIHFNRIQWLVMDEADRILDLGFEKDITVILNAVNAECEKRQNVLLSATLT-- 308
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVL--LSATL 238
+G R L + Q P SVL L
Sbjct: 309 ----------------------------EGVTR-----LADISLQNPVSISVLDETQNRL 335
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
TP + A + P + + ++ +P+ LKQH +V P KLRLV LA+FIL
Sbjct: 336 TPG-NKTAREAPRPPTEAE----------EENFAVPEKLKQHVVVVPSKLRLVTLAAFIL 384
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELL 329
GKC+ + KM+VF ++ ++ ++H L
Sbjct: 385 GKCKF---ESNQKMIVFFSSCELVEFHHSLF 412
>gi|410922379|ref|XP_003974660.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like [Takifugu
rubripes]
Length = 626
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/564 (44%), Positives = 358/564 (63%), Gaps = 32/564 (5%)
Query: 352 KKTEVKSG-PISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGM 410
KK+ SG SSLF+NNP+IP + + + E++F S+ + +HP + LN+
Sbjct: 39 KKSTGSSGIKTSSLFRNNPEIPQMHRPAVSQLKESIFTSDSFTQM-NLHPHLVTTLNKVF 97
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ + VT VQ+ ++ +L G D +VRSQTGSGKTLAYAIP++Q LQ + PK+SR DG A+
Sbjct: 98 SASMVTMVQRQTVPLLLSGHDAMVRSQTGSGKTLAYAIPVVQSLQAVHPKVSRGDGPLAL 157
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II+PTRELA QT F KL K FTWIVP L GGEK K+EKAR+RKGI+ILV+TPGRL+D
Sbjct: 158 IIVPTRELAQQTFCTFQKLLKPFTWIVPGVLMGGEKRKAEKARLRKGINILVSTPGRLVD 217
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H ++T ++ FS + LV+DEADR LD G+E+D+ L + Q++LLSATLT V
Sbjct: 218 HIRNTLSIAFSAIRWLVVDEADRTLDLGFEKDLTIILNSVNSAASSRQNVLLSATLTHGV 277
Query: 591 QRLAGMTLQNPIQIDAA--DSTD------------IHNTTDSLVIPDSLKQHFIVTPPKL 636
RLA + L++ + + + S+D + ++S VIP++LKQ ++ P K+
Sbjct: 278 TRLADICLKDSVSVTVSGLSSSDPAACSPAKTDHVTSSQSESFVIPEALKQFVVIVPSKV 337
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL-GEN----IAFFKLH 691
RLV LA+FIL KC+ + +K++VF+++ + ++ L ++VL G N + F +LH
Sbjct: 338 RLVCLAAFILDKCKF---SQNNKLIVFISSCETVEFLYMLFTSVLCGSNQNSGVIFLRLH 394
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G+M Q +RT+VF+ F + GVL+CTDVAARGLDLP V WI+QYT P ++ +YVHRVGRT
Sbjct: 395 GNMKQKDRTDVFQQFTVCRCGVLLCTDVAARGLDLPQVTWILQYTPPMAAAEYVHRVGRT 454
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL---SVKMEGDL----- 803
ARVG G+SL+FL P+E +EEL N I + EIKL D L +L+ + K G
Sbjct: 455 ARVGEAGNSLIFLTPAETAFIEELANHNISLSEIKLLDILSSLMMDDTYKGRGKYHSKSS 514
Query: 804 SRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQI 863
SR + AT LQ FE+ V + +A S++R Y +Y L+HIF+ + +
Sbjct: 515 SRALEQETRERATVLQTEFETFVHSDVVSVHAARTALQSFLRAYTTYPAHLKHIFHIRSL 574
Query: 864 HLGHFAKSFALRDAPSVISGIGKP 887
HLGH AKSF LR+AP +S P
Sbjct: 575 HLGHTAKSFGLREAPQALSTANHP 598
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/322 (41%), Positives = 192/322 (59%), Gaps = 52/322 (16%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
+ VT VQ+ ++ +L G D +VRSQTGSGKTLAYAIP++Q LQ + PK+SR DG A+II
Sbjct: 100 SMVTMVQRQTVPLLLSGHDAMVRSQTGSGKTLAYAIPVVQSLQAVHPKVSRGDGPLALII 159
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
+PTRELA QT F KL K FTWIVP L GGEK K+EKAR+RKGI+ILV+TPGRL+DH
Sbjct: 160 VPTRELAQQTFCTFQKLLKPFTWIVPGVLMGGEKRKAEKARLRKGINILVSTPGRLVDHI 219
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCW 183
++T ++ FS + LV+DEADR LD G+E+D+ L + Q++LLSATLT
Sbjct: 220 RNTLSIAFSAIRWLVVDEADRTLDLGFEKDLTIILNSVNSAASSRQNVLLSATLT----- 274
Query: 184 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQ 243
H V AD L S ++T
Sbjct: 275 -------------HGVTRLADICLKD-------------------------SVSVT---- 292
Query: 244 RLAGMTLQNPIQIDAADSTDIHNT-TDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
++G++ +P A + + ++ ++S VIP++LKQ ++ P K+RLV LA+FIL KC+
Sbjct: 293 -VSGLSSSDPAACSPAKTDHVTSSQSESFVIPEALKQFVVIVPSKVRLVCLAAFILDKCK 351
Query: 303 NVNEDEESKMLVFMATQDMADY 324
+ +K++VF+++ + ++
Sbjct: 352 F---SQNNKLIVFISSCETVEF 370
>gi|195165539|ref|XP_002023596.1| GL19832 [Drosophila persimilis]
gi|194105730|gb|EDW27773.1| GL19832 [Drosophila persimilis]
Length = 917
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/573 (43%), Positives = 350/573 (61%), Gaps = 76/573 (13%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +FA + G+H KNL + ++IT++TTVQQ +I +L G DVLVRS
Sbjct: 247 RTVKPVRETIFAGSKVASL-GLHAHAVKNLEDLLSITELTTVQQKTIPHVLSGKDVLVRS 305
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++KLQ P I R DG+ A+II+PTREL +QT E+F KL K +TWI
Sbjct: 306 QTGSGKTLAYALPLVEKLQGQVPHIKRTDGVVALIIVPTRELVVQTYELFQKLVKPYTWI 365
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI++LV TPGRL+DH HT + K +++ LVLDEADR+L+
Sbjct: 366 VPGSLLGGESRKSEKARLRKGINVLVGTPGRLVDHLLHTASFKLFRLQFLVLDEADRLLE 425
Query: 557 QGYERDIAEFLEILKKQK----------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDA 606
GYERD+ + +E + K + PQ Q +LLSATLT VQ LAG+ L +P+ ID
Sbjct: 426 LGYERDVKQLVEAIDKHRLEAQGQDEKLPQLQRLLLSATLTAQVQELAGLALSDPLYIDN 485
Query: 607 ADSTDI----------------------------HNTTDSLVIPDSLKQHFIVTPPKLRL 638
+D + T L IP++L +IV P KLRL
Sbjct: 486 SDEAASAALKSKEGYQKDSIEAQLEPDDGLGEYQEDVTGVLSIPENLHLSYIVVPAKLRL 545
Query: 639 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL--------------------- 677
VAL+S + + ++ K ++FM+T +M ++H ++L
Sbjct: 546 VALSSLLAKEL--AASPKQFKAIIFMSTTEMVNFHHDMLNEALTRRVLDEDDEQVKDNDE 603
Query: 678 -------STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVD 730
ST L + + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P +
Sbjct: 604 DSDEQDTSTPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIK 663
Query: 731 WIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDC 790
++QYT P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+N+RIRI++ +
Sbjct: 664 LVIQYTPPQTTADFVHRVGRTARAGRKGRAVLFLAPSESQFVRHLENKRIRIQQGDMYAY 723
Query: 791 LQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASY 850
LQ LL + E V+ AA+ LQ F++ + + LH +CK + SW++FY+++
Sbjct: 724 LQTLLPLDDEAR-------TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTF 776
Query: 851 SKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
K+L+ IFN + H+GHFAKSFAL++AP+ +G
Sbjct: 777 PKELKPIFNVRIAHMGHFAKSFALKEAPTKFAG 809
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 197/368 (53%), Gaps = 101/368 (27%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++IT++TTVQQ +I +L G DVLVRSQTGSGKTLAYA+P+++KLQ P I R DG+ A
Sbjct: 279 LSITELTTVQQKTIPHVLSGKDVLVRSQTGSGKTLAYALPLVEKLQGQVPHIKRTDGVVA 338
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II+PTREL +QT E+F KL K +TWIVP L GGE KSEKAR+RKGI++LV TPGRL
Sbjct: 339 LIIVPTRELVVQTYELFQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINVLVGTPGRL- 397
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
V+HL+
Sbjct: 398 -------------VDHLL------------------------------------------ 402
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK----------PQFQ 230
HT + K +++ LVLDEADR+L+ GYERD+ + +E + K + PQ Q
Sbjct: 403 -----HTASFKLFRLQFLVLDEADRLLELGYERDVKQLVEAIDKHRLEAQGQDEKLPQLQ 457
Query: 231 SVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDI-------------------------- 264
+LLSATLT VQ LAG+ L +P+ ID +D
Sbjct: 458 RLLLSATLTAQVQELAGLALSDPLYIDNSDEAASAALKSKEGYQKDSIEAQLEPDDGLGE 517
Query: 265 --HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 322
+ T L IP++L +IV P KLRLVAL+S + + ++ K ++FM+T +M
Sbjct: 518 YQEDVTGVLSIPENLHLSYIVVPAKLRLVALSSLLAKEL--AASPKQFKAIIFMSTTEMV 575
Query: 323 DYHTELLS 330
++H ++L+
Sbjct: 576 NFHHDMLN 583
>gi|170065395|ref|XP_001867921.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167882499|gb|EDS45882.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 747
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/602 (43%), Positives = 368/602 (61%), Gaps = 57/602 (9%)
Query: 362 SSLFQN-NPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQ 420
S+LF+ DIP V + P +E +F+ T + IH +KN+ + + ++T VQ
Sbjct: 98 SNLFEKMKRDIPKVELPEVVPFTERVFSETRLDSL-DIHAHSRKNVADLLGFQRLTVVQD 156
Query: 421 LSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELAL 480
L+I +L G DVL+R+QTGSGKTLAYA+P+++KL ++SR DGI AV+I+PTRELAL
Sbjct: 157 LAIPKVLAGRDVLIRAQTGSGKTLAYALPLVEKLHSAEVRVSRGDGILAVVIVPTRELAL 216
Query: 481 QTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKF 540
QT E+F KL K FTWIV +L GGEK K+EKAR+R G++IL+ TPGR DH K+TE++K
Sbjct: 217 QTYELFLKLLKPFTWIVSGYLCGGEKRKAEKARLRAGLNILIGTPGRFCDHIKNTESMKL 276
Query: 541 SKVEHLVLDEADRILDQGYERDIAEFLEILK--KQKPQFQSILLSATLTPAVQRLAGMTL 598
V++LVLDEADR+L+ GYE+D+ E +E +K + Q++LLSATLT +V+ LAGMTL
Sbjct: 277 GGVKYLVLDEADRLLELGYEKDVKEIVESIKGVDGEKSLQTVLLSATLTRSVKELAGMTL 336
Query: 599 QNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC-QN 651
QNP +D +D + + + + IP +++Q F+V PPKLRLV+L+ I + +N
Sbjct: 337 QNPEYVDTSDVAIERRFDTVEDLEERITIPATVRQSFLVIPPKLRLVSLSGLIAYELNRN 396
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVL--------GEN------------------- 684
N K LVFMATQD+ DYH +++ VL EN
Sbjct: 397 TN-----KALVFMATQDLVDYHYDIMVEVLTQKKPDSDAENSDSDGESSSSEPEPDSPAS 451
Query: 685 ------IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
+ FFKLHG M+Q ER+ VFK FR+ ++ VL+CTDVAARG+D+P VD +VQY AP
Sbjct: 452 AILLPKVTFFKLHGKMTQIERSSVFKEFRAARTAVLLCTDVAARGIDVPSVDLVVQYHAP 511
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
DYVHRVGRTAR G G ++LFL P+E V+ L ++I + E + + + +
Sbjct: 512 QILADYVHRVGRTARAGQSGKAVLFLDPAETDFVKHLGEKQISLAEERPEPLFGRIGVLM 571
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
G R + N E AA LQ FE V +K L + A K + SWVR+Y+++ K+LR +F
Sbjct: 572 NPGGHGR--NKNREQAAQELQQRFERLVAAEKELSSGAAKAFVSWVRYYSNFPKELRRMF 629
Query: 859 NFKQIHLGHFAKSFALRDAPS-VISGIGKPKN----KEELKNKKMAINKEKSFKQRG-NF 912
+ +++GH+AK LRD P + PK+ ++E ++K K Q+G NF
Sbjct: 630 AIRAVNMGHYAKCLGLRDPPKQFVRAHTGPKDDDGGEQEGGHRKQWDRKNGRGPQKGKNF 689
Query: 913 SK 914
SK
Sbjct: 690 SK 691
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 196/332 (59%), Gaps = 63/332 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++T VQ L+I +L G DVL+R+QTGSGKTLAYA+P+++KL ++SR DGI A
Sbjct: 146 LGFQRLTVVQDLAIPKVLAGRDVLIRAQTGSGKTLAYALPLVEKLHSAEVRVSRGDGILA 205
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I+PTRELALQT E+F KL K FTWIV +L GGEK K+EKAR+R G++IL+ TPGR
Sbjct: 206 VVIVPTRELALQTYELFLKLLKPFTWIVSGYLCGGEKRKAEKARLRAGLNILIGTPGRFC 265
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK--KQKPQFQSILLSATLT 178
DH K+TE++K V++LVLDEADR+L+ GYE+D+ E +E +K + Q++LLSATLT
Sbjct: 266 DHIKNTESMKLGGVKYLVLDEADRLLELGYEKDVKEIVESIKGVDGEKSLQTVLLSATLT 325
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+ K + E+ +D +D +++ + D E LE + + + AT
Sbjct: 326 RS---VKELAGMTLQNPEY--VDTSDVAIERRF--DTVEDLE---------ERITIPAT- 368
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
++Q F+V PPKLRLV+L+ I
Sbjct: 369 --------------------------------------VRQSFLVIPPKLRLVSLSGLIA 390
Query: 299 GKC-QNVNEDEESKMLVFMATQDMADYHTELL 329
+ +N N K LVFMATQD+ DYH +++
Sbjct: 391 YELNRNTN-----KALVFMATQDLVDYHYDIM 417
>gi|198468121|ref|XP_002133938.1| GA27288 [Drosophila pseudoobscura pseudoobscura]
gi|198146263|gb|EDY72565.1| GA27288 [Drosophila pseudoobscura pseudoobscura]
Length = 917
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/573 (43%), Positives = 350/573 (61%), Gaps = 76/573 (13%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +FA + G+H KNL + ++IT++TTVQQ +I +L G DVLVRS
Sbjct: 247 RTVKPVRETIFAGSKVASL-GLHAHAVKNLEDLLSITELTTVQQKTIPHVLSGKDVLVRS 305
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++KLQ P I R DG+ A+II+PTREL +QT E+F KL K +TWI
Sbjct: 306 QTGSGKTLAYALPLVEKLQGQVPHIKRTDGVVALIIVPTRELVVQTYELFQKLVKPYTWI 365
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI++LV TPGRL+DH HT + K +++ LVLDEADR+L+
Sbjct: 366 VPGSLLGGESRKSEKARLRKGINVLVGTPGRLVDHLLHTASFKLFRLQFLVLDEADRLLE 425
Query: 557 QGYERDIAEFLEILKKQK----------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDA 606
GYERD+ + +E + K + PQ Q +LLSATLT VQ LAG+ L +P+ ID
Sbjct: 426 LGYERDVKQLVEAIDKHRLEAQGQDEKLPQLQRLLLSATLTAQVQELAGLALSDPLYIDN 485
Query: 607 ADSTDI----------------------------HNTTDSLVIPDSLKQHFIVTPPKLRL 638
+D + T L IP++L +IV P KLRL
Sbjct: 486 SDEAASAALKSKEGYQKDSIEAQLEPDDGLGEYQEDVTGVLSIPENLHLSYIVVPAKLRL 545
Query: 639 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL--------------------- 677
VAL+S + + ++ K ++FM+T +M ++H ++L
Sbjct: 546 VALSSLLAKEL--AASPKQFKAIIFMSTTEMVNFHHDMLNEALTRRVLDEDDEQVKDNDE 603
Query: 678 -------STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVD 730
ST L + + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P +
Sbjct: 604 DSDEQDTSTPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIK 663
Query: 731 WIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDC 790
++QYT P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+N+RIRI++ +
Sbjct: 664 LVIQYTPPQTTADFVHRVGRTARAGRKGRAVLFLAPSESQFVRHLENKRIRIQQGDMYAY 723
Query: 791 LQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASY 850
LQ LL + E V+ AA+ LQ F++ + + LH +CK + SW++FY+++
Sbjct: 724 LQTLLPLDDEAR-------TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTF 776
Query: 851 SKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
K+L+ IFN + H+GHFAKSFAL++AP+ +G
Sbjct: 777 PKELKPIFNVRIAHMGHFAKSFALKEAPTKFAG 809
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 197/368 (53%), Gaps = 101/368 (27%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++IT++TTVQQ +I +L G DVLVRSQTGSGKTLAYA+P+++KLQ P I R DG+ A
Sbjct: 279 LSITELTTVQQKTIPHVLSGKDVLVRSQTGSGKTLAYALPLVEKLQGQVPHIKRTDGVVA 338
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II+PTREL +QT E+F KL K +TWIVP L GGE KSEKAR+RKGI++LV TPGRL
Sbjct: 339 LIIVPTRELVVQTYELFQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINVLVGTPGRL- 397
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
V+HL+
Sbjct: 398 -------------VDHLL------------------------------------------ 402
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK----------PQFQ 230
HT + K +++ LVLDEADR+L+ GYERD+ + +E + K + PQ Q
Sbjct: 403 -----HTASFKLFRLQFLVLDEADRLLELGYERDVKQLVEAIDKHRLEAQGQDEKLPQLQ 457
Query: 231 SVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDI-------------------------- 264
+LLSATLT VQ LAG+ L +P+ ID +D
Sbjct: 458 RLLLSATLTAQVQELAGLALSDPLYIDNSDEAASAALKSKEGYQKDSIEAQLEPDDGLGE 517
Query: 265 --HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 322
+ T L IP++L +IV P KLRLVAL+S + + ++ K ++FM+T +M
Sbjct: 518 YQEDVTGVLSIPENLHLSYIVVPAKLRLVALSSLLAKEL--AASPKQFKAIIFMSTTEMV 575
Query: 323 DYHTELLS 330
++H ++L+
Sbjct: 576 NFHHDMLN 583
>gi|431898943|gb|ELK07313.1| Putative ATP-dependent RNA helicase DDX31 [Pteropus alecto]
Length = 741
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 251/560 (44%), Positives = 345/560 (61%), Gaps = 51/560 (9%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP+IP + ++ V E +F+ ++ + +HP + +N +N+ +T+VQ
Sbjct: 106 SSLFKNNPEIPELHRPVVQKVQEKVFSSGAFHDL-DLHPHLISTINTVLNMFNMTSVQMH 164
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA++++PTRELALQ
Sbjct: 165 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKTKIQRSDGPYALVLVPTRELALQ 224
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ +IF KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 225 SFDIFQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 284
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+V+ L++DEADRILD G+E+DI L + + + Q++LLSATLT V +LA ++L NP
Sbjct: 285 RVQWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVAQLADISLLNP 344
Query: 602 IQIDAAD-----------------STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I + + + DS IP+ L QH + P KLRLV+LA+F
Sbjct: 345 VSISVLEEGYGQANPQGGGALEVSAPQTSDELDSFAIPEGLDQHVTLVPSKLRLVSLAAF 404
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL---------------GENIAFFK 689
IL KC + KM+VF + ++ ++H L L + F +
Sbjct: 405 ILQKCAFAADQ---KMIVFFPSCELVEFHYTLFVQTLLPRPGAPAAAPLPSGSTQLKFLR 461
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG + Q +R VF+ F ++GVL+CTDVAARGLDLP V WIVQY APSS +YVHRVG
Sbjct: 462 LHGGLEQEDRIAVFQEFSHSRTGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYVHRVG 521
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL------ 803
RTAR+G GSSLL L PSE + V L + +I + EIK++D +LSV D
Sbjct: 522 RTARIGCRGSSLLILAPSEAEYVNSLASHKINVSEIKMED----ILSVLTRDDCFPGKQW 577
Query: 804 -----SRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
L+ + AT LQ FE V + + A K S++R Y +Y ++L+HIF
Sbjct: 578 GKQKPRALSPQGIRERATVLQTVFEDYVHSSEQTVSWAKKALQSFIRAYTTYPRELKHIF 637
Query: 859 NFKQIHLGHFAKSFALRDAP 878
+ + +HLGH AKSF LRDAP
Sbjct: 638 HVRLLHLGHVAKSFGLRDAP 657
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+ +T+VQ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 153 LNMFNMTSVQMHSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKTKIQRSDGPYA 212
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ +IF KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 213 LVLVPTRELALQSFDIFQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 272
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS+V+ L++DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 273 DHIKSTKNIHFSRVQWLIVDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 332
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
L + +L++GY + PQ L
Sbjct: 333 VAQLADISLLNPVSIS---------VLEEGY-----------GQANPQGGGAL------- 365
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
++ A ++D DS IP+ L QH + P KLRLV+LA+FIL K
Sbjct: 366 --------------EVSAPQTSD---ELDSFAIPEGLDQHVTLVPSKLRLVSLAAFILQK 408
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C + KM+VF + ++ ++H L
Sbjct: 409 CAFAADQ---KMIVFFPSCELVEFHYTLF 434
>gi|195132139|ref|XP_002010501.1| GI14650 [Drosophila mojavensis]
gi|193908951|gb|EDW07818.1| GI14650 [Drosophila mojavensis]
Length = 893
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 270/653 (41%), Positives = 387/653 (59%), Gaps = 113/653 (17%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F+ T E G+HP KNL++ ++I+Q+TTVQQ +I +L G DVLVRS
Sbjct: 240 RAVKPVRETIFSGTKVESL-GLHPHAVKNLSDLLSISQLTTVQQKTIPHVLAGKDVLVRS 298
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P++++LQ P+I R DG+ A++I+PTRELALQT E+F KL K FTWI
Sbjct: 299 QTGSGKTLAYALPLVERLQSQLPRIKRTDGVVALVIVPTRELALQTYELFQKLVKPFTWI 358
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI++L+ TPGRL+DH HT + K SK++ LVLDEADR+L+
Sbjct: 359 VPGALLGGESRKSEKARLRKGINVLLGTPGRLVDHLLHTASFKLSKLQFLVLDEADRLLE 418
Query: 557 QGYERDIAEFLEILKKQK---PQ-----FQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + K + PQ Q +LLSATLT VQ+LAG+TL++P+ ID +D
Sbjct: 419 LGYERDVKQLVEAIDKHRAEEPQEPPVALQRMLLSATLTSQVQQLAGLTLKDPLYIDNSD 478
Query: 609 STD--------------------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
+ + T L IP++L+ ++V PPKLRLV ++
Sbjct: 479 EAADAALKGANGYDKDTIEAQQEDGLGEYMEDVTGVLSIPENLQLSYVVVPPKLRLVTIS 538
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS------------------------ 678
+ + + ++ K +VFM+T +M ++H +LL+
Sbjct: 539 ALLAKEL--AASPKQFKAIVFMSTTEMVNFHHDLLNEALTRRVLDEDDEQQNKEESDEDD 596
Query: 679 ---TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
T L + + FFKL+GSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQY
Sbjct: 597 DDETPLLQGLRFFKLNGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQY 656
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
T P ++ D+VHRVGRTAR G G ++LFL PSE + V L+N+RIRI++ + LQ LL
Sbjct: 657 TPPQTTADFVHRVGRTARAGRRGRAVLFLAPSEAQYVRHLENKRIRIQQGDMYSYLQALL 716
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
E V+ AA+ LQ F+S + + + LH +CK + SW++FY+++ K+L+
Sbjct: 717 PRDPEAR-------TVQEAASNLQHKFQSLLEEDRELHDKSCKAFVSWMKFYSTFPKELK 769
Query: 856 HIFNFKQIHLGHFAKSFALRDAPSVISG------IGKPKNK--------EELKN------ 895
IFN + H+GHFAKSFAL++APS +G P N+ E+++
Sbjct: 770 PIFNVRIAHMGHFAKSFALKEAPSKFAGQHAAPKAAPPTNRLTYTERDPEKVQQAKREKR 829
Query: 896 ----------------------KKMAINKEKSFKQRGNFSKKQMLSEFDSGLP 926
+K+A N SF + N S+ +SEFDSGLP
Sbjct: 830 RLYTTTVSGEVRQTQQHGAADRRKLAGNGRSSFMKSLNKSRALTISEFDSGLP 882
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 206/344 (59%), Gaps = 57/344 (16%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I+Q+TTVQQ +I +L G DVLVRSQTGSGKTLAYA+P++++LQ P+I R DG+ A
Sbjct: 272 LSISQLTTVQQKTIPHVLAGKDVLVRSQTGSGKTLAYALPLVERLQSQLPRIKRTDGVVA 331
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTRELALQT E+F KL K FTWIVP L GGE KSEKAR+RKGI++L+ TPGRL+
Sbjct: 332 LVIVPTRELALQTYELFQKLVKPFTWIVPGALLGGESRKSEKARLRKGINVLLGTPGRLV 391
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK---PQ-----FQSIL 172
DH HT + K SK++ LVLDEADR+L+ GYERD+ + +E + K + PQ Q +L
Sbjct: 392 DHLLHTASFKLSKLQFLVLDEADRLLELGYERDVKQLVEAIDKHRAEEPQEPPVALQRML 451
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILD------QGYERDIAEFLEILKKQK 226
LSATLT TLK + L +D +D D GY++D E
Sbjct: 452 LSATLTSQVQQLAGL-TLK----DPLYIDNSDEAADAALKGANGYDKDTIE--------- 497
Query: 227 PQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPP 286
Q+ G+ + + T L IP++L+ ++V PP
Sbjct: 498 ---------------AQQEDGL------------GEYMEDVTGVLSIPENLQLSYVVVPP 530
Query: 287 KLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
KLRLV +++ + + ++ K +VFM+T +M ++H +LL+
Sbjct: 531 KLRLVTISALLAKEL--AASPKQFKAIVFMSTTEMVNFHHDLLN 572
>gi|158289714|ref|XP_311385.3| AGAP010670-PA [Anopheles gambiae str. PEST]
gi|157018460|gb|EAA07030.3| AGAP010670-PA [Anopheles gambiae str. PEST]
Length = 569
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/559 (44%), Positives = 354/559 (63%), Gaps = 67/559 (11%)
Query: 379 LKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQT 438
++P E LF+ S++ IHP KKN+ + + +TTVQ ++I +L G D L+R+QT
Sbjct: 6 VRPFQEKLFSEQSFDSL-DIHPHSKKNIADLLQYEHLTTVQSMAIPSLLKGTDALIRAQT 64
Query: 439 GSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVP 498
GSGKTLAYA+P+I++L +RP+I R DGI AV+I+PTRELA+QT E+ KL K FTWIVP
Sbjct: 65 GSGKTLAYALPLIERLHTIRPQIHRSDGIRAVVIVPTRELAVQTYELIQKLLKPFTWIVP 124
Query: 499 SWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQG 558
+LTGGEK K+EKAR+R G++IL+ATPGRL DH ++TE+LKF V LVLDEADR+L+ G
Sbjct: 125 GYLTGGEKRKTEKARLRAGLNILIATPGRLCDHIRNTESLKFGNVCCLVLDEADRLLELG 184
Query: 559 YERDIAEFLEILKKQKPQ--------FQSILLSATLTPAVQRLAGMTLQNPIQIDAAD-- 608
YE D+ + +E +++ + + Q++LLSATLT +V+ LAG+TLQ+P+ ++ ++
Sbjct: 185 YETDVKQIIEAMREAREEKDENEAMKLQTVLLSATLTASVKELAGLTLQDPVYVETSEVV 244
Query: 609 -------------STD-IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
TD + N D + IP ++KQ ++VT PK RLVAL++ I+ +
Sbjct: 245 QRETPSVEQGANICTDQLLNVGDYVSIPATVKQRYLVTVPKQRLVALSALIVHE----QR 300
Query: 655 DEESKMLVFMATQDMADYHTELLSTVL---------------------GEN--------- 684
+ SK+LVFMATQD+ ++H ++++ VL GEN
Sbjct: 301 QKPSKILVFMATQDLVNFHYDVMTEVLTLQKFGTTVDNEASESEEDINGENNGPTDSSNV 360
Query: 685 ----IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
+ F+KLHG M+Q ER VF FR + VLICTDVAARG+D+PLVD +VQY AP
Sbjct: 361 LLPGLKFYKLHGHMTQLERISVFNEFRKATAAVLICTDVAARGIDIPLVDLVVQYHAPQI 420
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL-LSVKM 799
DYVHRVGRTAR GH G +++FL P+E + ++ L ++ IRI+E K+ ++N L V
Sbjct: 421 LADYVHRVGRTARAGHTGKAVIFLEPAEQEFIQYLTDKHIRIQEQKIDGIIKNFGLFVNR 480
Query: 800 EGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
+ N A +Q +E + ++ L SA K Y SWVR+Y+++ K+LR+IF
Sbjct: 481 NQKPKPI---NKIHWAYEIQHRYERLIKKEDQLFDSAKKAYVSWVRYYSNFQKELRNIFC 537
Query: 860 FKQIHLGHFAKSFALRDAP 878
K IHLGH+AK L +AP
Sbjct: 538 IKAIHLGHYAKCLGLSEAP 556
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 217/351 (61%), Gaps = 60/351 (17%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
+TTVQ ++I +L G D L+R+QTGSGKTLAYA+P+I++L +RP+I R DGI AV+I+
Sbjct: 40 HLTTVQSMAIPSLLKGTDALIRAQTGSGKTLAYALPLIERLHTIRPQIHRSDGIRAVVIV 99
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+QT E+ KL K FTWIVP +LTGGEK K+EKAR+R G++IL+ATPGRL DH +
Sbjct: 100 PTRELAVQTYELIQKLLKPFTWIVPGYLTGGEKRKTEKARLRAGLNILIATPGRLCDHIR 159
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ--------FQSILLSAT 176
+TE+LKF V LVLDEADR+L+ GYE D+ + +E +++ + + Q++LLSAT
Sbjct: 160 NTESLKFGNVCCLVLDEADRLLELGYETDVKQIIEAMREAREEKDENEAMKLQTVLLSAT 219
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
LT + ++ L L + + E E+++++
Sbjct: 220 LTASV-----------KELAGLTLQDPVYV----------ETSEVVQRE----------- 247
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
TP+V++ A + + + N D + IP ++KQ ++VT PK RLVAL++
Sbjct: 248 --TPSVEQGANIC-----------TDQLLNVGDYVSIPATVKQRYLVTVPKQRLVALSAL 294
Query: 297 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDN 347
I+ + + SK+LVFMATQD+ ++H ++++ ++ L+++ DN
Sbjct: 295 IVHE----QRQKPSKILVFMATQDLVNFHYDVMT---EVLTLQKFGTTVDN 338
>gi|195432050|ref|XP_002064039.1| GK19923 [Drosophila willistoni]
gi|194160124|gb|EDW75025.1| GK19923 [Drosophila willistoni]
Length = 917
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/561 (43%), Positives = 349/561 (62%), Gaps = 68/561 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F+ + + P +HP KNL + ++I +TTVQ+ +I IL G DVLVRS
Sbjct: 248 RAVKPVKETIFSTSKVKSLP-LHPHAVKNLEDLLSIRDLTTVQEKAIPHILAGKDVLVRS 306
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++KLQ PKI R DG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 307 QTGSGKTLAYALPLVEKLQAQVPKIKRTDGVMALVIVPTRELVMQTYELLQKLVKPYTWI 366
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+ILV TPGRL+DH HT + K + ++ LVLDEADR+L+
Sbjct: 367 VPGSLLGGESRKSEKARLRKGINILVGTPGRLVDHLLHTASFKLTSLQFLVLDEADRLLE 426
Query: 557 QGYERDIAEFLEILKKQKPQ------FQSILLSATLTPAVQRLAGMTLQNPIQIDAADST 610
GYERD+ + +E + KQ+ + Q +LLSATLT VQ+LAG+TL+ P+ ID +D
Sbjct: 427 LGYERDVQQLVEAIDKQRAENEIVTKMQRLLLSATLTTQVQQLAGLTLKEPLYIDNSDEA 486
Query: 611 DI---------------------------HNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
+ T L IP++L +IV PPKLRLVA+++
Sbjct: 487 ASLALNGKSGYQKESIEAQLGDDGLGEYQEDVTGVLSIPENLHLSYIVVPPKLRLVAISA 546
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENI------------------ 685
+ + ++ K ++FM+T +M ++H ++L+ L + +
Sbjct: 547 LLAKEL--AASPKQFKAIIFMSTTEMVNFHHDMLNEALTQRVLDEDDEKSDDDDDDNDEG 604
Query: 686 -------AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
FFKLHGSM+Q+ER VF FR S VL+ TDV RG+D+P + ++QYT P
Sbjct: 605 RPLLQGLRFFKLHGSMTQTERQGVFHGFRECPSCVLLATDVVGRGIDVPDIKLVIQYTPP 664
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 665 QTTADFVHRVGRTARAGRKGRAVLFLAPSEAQFVRHLEKKRIRIQQGDMYAYLQALLP-- 722
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
D +R V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+ IF
Sbjct: 723 -RDDEAR----TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIF 777
Query: 859 NFKQIHLGHFAKSFALRDAPS 879
N + H+GHFAKSFAL++AP+
Sbjct: 778 NVRIAHMGHFAKSFALKEAPT 798
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 198/336 (58%), Gaps = 42/336 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I +TTVQ+ +I IL G DVLVRSQTGSGKTLAYA+P+++KLQ PKI R DG+ A
Sbjct: 280 LSIRDLTTVQEKAIPHILAGKDVLVRSQTGSGKTLAYALPLVEKLQAQVPKIKRTDGVMA 339
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+ILV TPGRL+
Sbjct: 340 LVIVPTRELVMQTYELLQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILVGTPGRLV 399
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ------FQSILLS 174
DH HT + K + ++ LVLDEADR+L+ GYERD+ + +E + KQ+ + Q +LLS
Sbjct: 400 DHLLHTASFKLTSLQFLVLDEADRLLELGYERDVQQLVEAIDKQRAENEIVTKMQRLLLS 459
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
ATLT TLK E L +D +D E + K +Q +
Sbjct: 460 ATLTTQVQQLAGL-TLK----EPLYIDNSD------------EAASLALNGKSGYQKESI 502
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
A L D + T L IP++L +IV PPKLRLVA++
Sbjct: 503 EAQLG-----------------DDGLGEYQEDVTGVLSIPENLHLSYIVVPPKLRLVAIS 545
Query: 295 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ + + ++ K ++FM+T +M ++H ++L+
Sbjct: 546 ALLAKEL--AASPKQFKAIIFMSTTEMVNFHHDMLN 579
>gi|427792247|gb|JAA61575.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 746
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/561 (43%), Positives = 352/561 (62%), Gaps = 23/561 (4%)
Query: 383 SEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
+E +F+ + + EF G+HP + L + IT T VQ+L+I +L D L++S TGSGK
Sbjct: 177 NEPVFSSSQFSEF-GVHPHLVACLRDRFQITTATEVQKLAIPALLGRRDTLIKSHTGSGK 235
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
TLAYA+PI+ LQE+RPK++R DG+ AV+I+PTRELALQT E F KL K+ TW+VP L
Sbjct: 236 TLAYALPILHCLQEIRPKLTRADGVRAVVIVPTRELALQTYEWFEKLSKACTWVVPGVLM 295
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GGEK KSEKAR+RKG++I++ TPGRL DH +HTE+ + LV+DEADR+L+ G+E
Sbjct: 296 GGEKKKSEKARLRKGLAIVIGTPGRLTDHLEHTESFSLANTSWLVVDEADRMLELGFEES 355
Query: 563 IAEFLEILKKQKP-QFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVI 621
+++ + + K+Q+ + S+LLSATLT V++LAG+TL++P+ +D A + N + V+
Sbjct: 356 VSKIVTLWKEQRRVEGTSVLLSATLTKGVEKLAGLTLEDPMTVDVAVESGA-NELEEFVL 414
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
P L Q+++ P KL +AL +L C E K++VF+ATQD D+ L S+VL
Sbjct: 415 PPGLSQYYLQVPVKLSQMALCCLLLEACVAA---ERGKVIVFLATQDSVDFEHALFSSVL 471
Query: 682 G-------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQ 734
G + I F +LHG M+Q +R EVF FR SGVL TDVA+RG+D+P VD IVQ
Sbjct: 472 GVMLEDTDKRIDFVRLHGEMTQHDRAEVFNRFREATSGVLFTTDVASRGIDVPQVDLIVQ 531
Query: 735 YTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL 794
P +YVHR GRTAR+G +G +L L PSEV ++ L R I+++++ LK L +
Sbjct: 532 CCVPLRPEEYVHRAGRTARIGAKGKVVLLLFPSEVGFLDVLAQRNIQLDQMDLKGVLSKV 591
Query: 795 LSVKMEGDLSRLADG----NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASY 850
++K +R G +E TALQ+ FES V ++ L A KG+ S VR YASY
Sbjct: 592 FTIKSHILEARTDPGQKLKTMEDFVTALQLIFESEVYKETALQEMAKKGFLSHVRSYASY 651
Query: 851 SKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN--KEKSFKQ 908
+ +RH+ +FK +HLGH AK++ LR+ PS + ++ ++ + +S +
Sbjct: 652 PRAMRHVVSFKALHLGHLAKAYCLRETPSALGAQWAAHPPQDAPGRRFGHGNTRFRSSDR 711
Query: 909 RGNFS----KKQMLSEFDSGL 925
RG K+ +SE+DSGL
Sbjct: 712 RGKQQRPPIKRVKISEYDSGL 732
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
IT T VQ+L+I +L D L++S TGSGKTLAYA+PI+ LQE+RPK++R DG+ A
Sbjct: 203 FQITTATEVQKLAIPALLGRRDTLIKSHTGSGKTLAYALPILHCLQEIRPKLTRADGVRA 262
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I+PTRELALQT E F KL K+ TW+VP L GGEK KSEKAR+RKG++I++ TPGRL
Sbjct: 263 VVIVPTRELALQTYEWFEKLSKACTWVVPGVLMGGEKKKSEKARLRKGLAIVIGTPGRLT 322
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-QFQSILLSATLT 178
DH +HTE+ + LV+DEADR+L+ G+E +++ + + K+Q+ + S+LLSATLT
Sbjct: 323 DHLEHTESFSLANTSWLVVDEADRMLELGFEESVSKIVTLWKEQRRVEGTSVLLSATLT 381
>gi|156370098|ref|XP_001628309.1| predicted protein [Nematostella vectensis]
gi|156215282|gb|EDO36246.1| predicted protein [Nematostella vectensis]
Length = 585
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/562 (44%), Positives = 345/562 (61%), Gaps = 67/562 (11%)
Query: 347 NYEIPKKTEVKSGP----ISSLFQNNPDIPNVPTRRLKP--------VSEALFAPTSYEE 394
Y I E K+ ISSLF++NP IP V R LK ++ LF + +
Sbjct: 53 GYAISTSNETKNTDNVKVISSLFRHNPAIPEV-KRILKKDKKTQQSLENKPLFTGDKFSD 111
Query: 395 FPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL 454
+ M NL + ++++T+VQ+ +I +L G DV ++S+TGSGKTL YAIP++Q L
Sbjct: 112 L-ALSSHMVSNLENNVGVSKLTSVQKAAIPTLLAGEDVCIKSKTGSGKTLCYAIPVVQTL 170
Query: 455 QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARI 514
Q++ PKI R DG YAV+++PTRELALQ+ + KL K F W+VP + GGEK KSEKAR+
Sbjct: 171 QDIVPKIERADGPYAVVLVPTRELALQSFNLLLKLVKPFQWVVPGLVVGGEKRKSEKARL 230
Query: 515 RKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK 574
RKGI+ILVATPGRLLDH + T+ L F V+ +VLDEADR+LD G+E+D++ L+ +K Q+
Sbjct: 231 RKGINILVATPGRLLDHIEKTQCLTFRNVQWIVLDEADRLLDMGFEKDVSAILKAIKDQQ 290
Query: 575 PQF---QSILLSATLTPAVQRLAGMTLQNPIQIDAA---DSTDIHNTTDSLV---IPDSL 625
+ Q++LLSATLT V++L + L NP + + + + D V IP L
Sbjct: 291 IKAMHRQAVLLSATLTQGVKQLVSIALSNPQFVSESGLNQQVEKDGSLDESVLAQIPSQL 350
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENI 685
KQ+F++ P K+RLV+LASFIL K Q E ++KM+VF++++D D+H L LG
Sbjct: 351 KQYFVIVPSKMRLVSLASFILSKVQ---ESPQNKMIVFLSSRDSVDFHYGLFDKCLGLGA 407
Query: 686 A----FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
+KLHGSMSQ+ERT+VF + S + G+L+ TDVAARGLDLP V WI+QY P S+
Sbjct: 408 GKKPELYKLHGSMSQTERTDVFTKYSSSQEGILLSTDVAARGLDLPRVSWIIQYDTPGSA 467
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
DYVHRVGRTAR+G EG +LLFL P+EVK +E L IR EE+ + LQ L S+ +
Sbjct: 468 VDYVHRVGRTARIGCEGQALLFLTPAEVKYLETLSEFNIRPEELSVSKILQTLTSISSK- 526
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
D+ + S+VR YA++ L+HIF+
Sbjct: 527 DVKK------------------------------------SFVRSYATFPASLKHIFHVN 550
Query: 862 QIHLGHFAKSFALRDAPSVISG 883
+HLGH AK+FALRD P+ ISG
Sbjct: 551 NLHLGHVAKAFALRDPPTGISG 572
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 199/332 (59%), Gaps = 61/332 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++++T+VQ+ +I +L G DV ++S+TGSGKTL YAIP++Q LQ++ PKI R DG YA
Sbjct: 126 VGVSKLTSVQKAAIPTLLAGEDVCIKSKTGSGKTLCYAIPVVQTLQDIVPKIERADGPYA 185
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+++PTRELALQ+ + KL K F W+VP + GGEK KSEKAR+RKGI+ILVATPGRLL
Sbjct: 186 VVLVPTRELALQSFNLLLKLVKPFQWVVPGLVVGGEKRKSEKARLRKGINILVATPGRLL 245
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF---QSILLSATL 177
DH + T+ L F V+ +VLDEADR+LD G+E+D++ L+ +K Q+ + Q++LLSATL
Sbjct: 246 DHIEKTQCLTFRNVQWIVLDEADRLLDMGFEKDVSAILKAIKDQQIKAMHRQAVLLSATL 305
Query: 178 TPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSAT 237
T QG ++ ++ L PQF S +
Sbjct: 306 T------------------------------QGVKQLVSIALS-----NPQFVS---ESG 327
Query: 238 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
L V++ + QI P LKQ+F++ P K+RLV+LASFI
Sbjct: 328 LNQQVEKDGSLDESVLAQI-----------------PSQLKQYFVIVPSKMRLVSLASFI 370
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
L K Q E ++KM+VF++++D D+H L
Sbjct: 371 LSKVQ---ESPQNKMIVFLSSRDSVDFHYGLF 399
>gi|195393350|ref|XP_002055317.1| GJ19298 [Drosophila virilis]
gi|194149827|gb|EDW65518.1| GJ19298 [Drosophila virilis]
Length = 957
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/566 (43%), Positives = 353/566 (62%), Gaps = 73/566 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +FA T E G+H KNL + ++I+Q+TTVQQ +I +L G DVLVRS
Sbjct: 292 RAVKPVKETIFAGTKVESL-GLHAHAVKNLLDLLSISQLTTVQQKTIPEVLAGKDVLVRS 350
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P++++LQ P+I R DG+ A+II+PTRELA+QT E+F KL K +TWI
Sbjct: 351 QTGSGKTLAYALPVVERLQAQLPRIKRTDGVLALIIVPTRELAVQTYELFQKLVKPYTWI 410
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI++L+ TPGRL+DH HT + K SK++ LVLDEADR+L+
Sbjct: 411 VPGALLGGESRKSEKARLRKGINVLLGTPGRLVDHLLHTASFKLSKLQFLVLDEADRLLE 470
Query: 557 QGYERDIAEFLEILKKQK---PQ-----FQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + K + PQ Q +LLSATLT VQ+LAG+TL+ P+ ID +D
Sbjct: 471 LGYERDVKQLVEAIDKHRAEEPQQPPVAMQRLLLSATLTAQVQQLAGLTLKEPLYIDNSD 530
Query: 609 STD--------------------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
+ + T L IP++L+ ++V PPKLRLV ++
Sbjct: 531 EAADAALKGTNGYQKETIEALQDDGLGEYVEDVTGVLSIPENLQLSYVVVPPKLRLVTIS 590
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-------------------- 682
+ + + ++ K +VFM+T +M ++H ++L+ L
Sbjct: 591 ALLAKEL--AASPKQFKAIVFMSTTEMVNFHHDVLNEALTRRVLDEDDEQLAKEEPEADD 648
Query: 683 ---------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIV 733
+ + FFKL+GSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +V
Sbjct: 649 DDDAERPLLQGLRFFKLNGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVV 708
Query: 734 QYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQN 793
QYT P ++ D+VHRVGRTAR G G ++LFL PSE + V L+++RIRI + + LQ
Sbjct: 709 QYTPPQTTADFVHRVGRTARAGRRGRAVLFLAPSEAQFVRHLESKRIRIMQGDMYAYLQA 768
Query: 794 LLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKD 853
L+ E V+ AA+ LQ F+S + + + LH +CK + SW++FY+++ K+
Sbjct: 769 LMPRDAEAR-------TVQEAASNLQHKFQSLLEEDRELHDKSCKAFVSWMKFYSTFPKE 821
Query: 854 LRHIFNFKQIHLGHFAKSFALRDAPS 879
L+ IFN + H+GHFAKSFAL++APS
Sbjct: 822 LKPIFNVRIAHMGHFAKSFALKEAPS 847
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 206/344 (59%), Gaps = 57/344 (16%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I+Q+TTVQQ +I +L G DVLVRSQTGSGKTLAYA+P++++LQ P+I R DG+ A
Sbjct: 324 LSISQLTTVQQKTIPEVLAGKDVLVRSQTGSGKTLAYALPVVERLQAQLPRIKRTDGVLA 383
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II+PTRELA+QT E+F KL K +TWIVP L GGE KSEKAR+RKGI++L+ TPGRL+
Sbjct: 384 LIIVPTRELAVQTYELFQKLVKPYTWIVPGALLGGESRKSEKARLRKGINVLLGTPGRLV 443
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK---PQ-----FQSIL 172
DH HT + K SK++ LVLDEADR+L+ GYERD+ + +E + K + PQ Q +L
Sbjct: 444 DHLLHTASFKLSKLQFLVLDEADRLLELGYERDVKQLVEAIDKHRAEEPQQPPVAMQRLL 503
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILD------QGYERDIAEFLEILKKQK 226
LSATLT A TLK E L +D +D D GY+++ E L+
Sbjct: 504 LSATLT-AQVQQLAGLTLK----EPLYIDNSDEAADAALKGTNGYQKETIEALQ------ 552
Query: 227 PQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPP 286
D + + T L IP++L+ ++V PP
Sbjct: 553 ------------------------------DDGLGEYVEDVTGVLSIPENLQLSYVVVPP 582
Query: 287 KLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
KLRLV +++ + + ++ K +VFM+T +M ++H ++L+
Sbjct: 583 KLRLVTISALLAKEL--AASPKQFKAIVFMSTTEMVNFHHDVLN 624
>gi|195049350|ref|XP_001992703.1| GH24071 [Drosophila grimshawi]
gi|193893544|gb|EDV92410.1| GH24071 [Drosophila grimshawi]
Length = 925
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/583 (42%), Positives = 353/583 (60%), Gaps = 90/583 (15%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F+ + E G+H KNL + ++I+Q+T+VQQ +I +L G DVLVRS
Sbjct: 242 RAVKPVKETIFSGSKVESL-GLHAHAVKNLKDLLSISQLTSVQQKAIPQVLAGRDVLVRS 300
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P++++LQ P+I R DG+ A+II+PTRELALQT E+F KL K +TWI
Sbjct: 301 QTGSGKTLAYALPMVERLQSQLPRIKRTDGVLALIIVPTRELALQTYELFQKLVKPYTWI 360
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI++L+ TPGRL+DH HT + + SK+ LVLDEADR+L+
Sbjct: 361 VPGALLGGESRKSEKARLRKGINVLLGTPGRLVDHLLHTASFRLSKLHFLVLDEADRLLE 420
Query: 557 QGYERDIAEFLEILKKQKPQ--------------------FQSILLSATLTPAVQRLAGM 596
GYERD+ + +E + KQ+ + Q +LLSATLT VQ+LAG+
Sbjct: 421 LGYERDVKQLVEAIDKQRTEDIEQQKNEIEANVQINAPVAMQRLLLSATLTAQVQQLAGL 480
Query: 597 TLQNPIQIDAAD---------------------STD-------IHNTTDSLVIPDSLKQH 628
TL++PI ID +D S D + + T L IP++L+
Sbjct: 481 TLKDPIYIDNSDEAADAALKGNNGYHKDTIEAQSNDDDGLGEYLEDVTGVLSIPENLQLS 540
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA-- 686
+++ PPKLRLV +A+ + ++ K +VFM+T +M ++H ++L+ L I
Sbjct: 541 YVIVPPKLRLVTIAALFAKEL--AANPKQFKAIVFMSTTEMVNFHHDVLNEALTRRILDE 598
Query: 687 ------------------------------FFKLHGSMSQSERTEVFKTFRSVKSGVLIC 716
FFKL+GSM+Q+ER VF+ FR + VL+
Sbjct: 599 DDEDDDQQLEKDQSRNDELNNETPLLQGLRFFKLNGSMTQTERQAVFRGFRECANCVLLA 658
Query: 717 TDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ 776
TDV RG+D+P V +VQYT P ++ D+VHRVGRTAR G G ++LFL PSE + V L+
Sbjct: 659 TDVVGRGIDVPDVKLVVQYTPPQTTADFVHRVGRTARAGRRGRAVLFLAPSEAQYVRHLE 718
Query: 777 NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSA 836
N+RIRI++ + L+ LL E V+ AA+ LQ F+S + + LH +
Sbjct: 719 NKRIRIQQGDMYGYLEALLPRDAEAR-------TVQEAASNLQHKFQSLLEDDRELHDKS 771
Query: 837 CKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
CK + SW++FY+++ K+L+ IFN + H+GHFAKSFAL++APS
Sbjct: 772 CKAFVSWMKFYSTFPKELKPIFNVRATHMGHFAKSFALKEAPS 814
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 203/356 (57%), Gaps = 67/356 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I+Q+T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P++++LQ P+I R DG+ A
Sbjct: 274 LSISQLTSVQQKAIPQVLAGRDVLVRSQTGSGKTLAYALPMVERLQSQLPRIKRTDGVLA 333
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II+PTRELALQT E+F KL K +TWIVP L GGE KSEKAR+RKGI++L+ TPGRL+
Sbjct: 334 LIIVPTRELALQTYELFQKLVKPYTWIVPGALLGGESRKSEKARLRKGINVLLGTPGRLV 393
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ------------- 167
DH HT + + SK+ LVLDEADR+L+ GYERD+ + +E + KQ+ +
Sbjct: 394 DHLLHTASFRLSKLHFLVLDEADRLLELGYERDVKQLVEAIDKQRTEDIEQQKNEIEANV 453
Query: 168 -------FQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILD------QGYERD 214
Q +LLSATLT A TLK + + +D +D D GY +D
Sbjct: 454 QINAPVAMQRLLLSATLT-AQVQQLAGLTLK----DPIYIDNSDEAADAALKGNNGYHKD 508
Query: 215 IAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIP 274
T++ D + + T L IP
Sbjct: 509 ----------------------------------TIEAQSNDDDGLGEYLEDVTGVLSIP 534
Query: 275 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++L+ +++ PPKLRLV +A+ + ++ K +VFM+T +M ++H ++L+
Sbjct: 535 ENLQLSYVIVPPKLRLVTIAALFAKEL--AANPKQFKAIVFMSTTEMVNFHHDVLN 588
>gi|391344930|ref|XP_003746747.1| PREDICTED: probable ATP-dependent RNA helicase DDX31-like
[Metaseiulus occidentalis]
Length = 721
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/596 (42%), Positives = 366/596 (61%), Gaps = 30/596 (5%)
Query: 350 IPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEA--LFAPTSYEEFPGIHPFMKKNLN 407
I KK E K P F + ++P PT V LF + E IHP + L
Sbjct: 133 INKKFE-KPTPKVDKFHVDVELPPAPTSDEIGVRAEIQLFTEDGFSELE-IHPHLVACLR 190
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+ M I + T +Q++S+ IL DVL++S TGSGKTLAYA+PI+ L PKI R+DG
Sbjct: 191 DRMKINKATVIQKMSVGHILKRKDVLIKSPTGSGKTLAYALPILHLLMNETPKIKREDGT 250
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
VII PTRELALQT + L K+ +IVP L GGEK KSEKAR+RKGI ++V TPGR
Sbjct: 251 RVVIITPTRELALQTYQCLELLSKACQYIVPGVLMGGEKKKSEKARLRKGIVVMVGTPGR 310
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS--ILLSAT 585
L+DH HT + F + LV+DEADR+L+ G+E+ I+ +E +K++ S ILLSAT
Sbjct: 311 LIDHLDHTSSFSFGTADWLVIDEADRMLEMGFEQSISRIIESWRKERAGKASNAILLSAT 370
Query: 586 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
LTP V++LAG++L P+ +DA + D D V+P+SL+Q F+V P KL LVAL+S I
Sbjct: 371 LTPGVEKLAGLSLNEPVVVDA--TQDCQGALDDFVLPESLEQTFMVCPTKLYLVALSSLI 428
Query: 646 L-GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------NIAFFKLHGSMSQS 697
+ G Q + K++VF+ TQ + D++ L S ++ E + F++LHG+MSQ
Sbjct: 429 VRGAIQ------KDKIVVFLPTQGVVDFYLNLFSGIMAEALLDSGYKVNFYRLHGTMSQH 482
Query: 698 ERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
+RTEVF FR +SGVL TDVA+RGLDLP VD IVQ++ P DYVHRVGRTAR+G E
Sbjct: 483 DRTEVFTQFRGRESGVLFTTDVASRGLDLPRVDLIVQFSLPLGVQDYVHRVGRTARIGTE 542
Query: 758 GSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG--NVETAA 815
G ++L L+P + K + L ++R E+++++ + + ++K + G + E
Sbjct: 543 GRAVLLLMPCQAKYLNLLAKAKLRPEQMQMRGVINYIKTLKDYIARKNPSFGLRSAEDYC 602
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
TALQ++FE+ V ++ L SA +++++R ASY +LR + FK++HLGH AK F L
Sbjct: 603 TALQLTFEAEVKKEPELLESARNAFSTYIRSAASYPLELREVAPFKELHLGHVAKMFCLN 662
Query: 876 DAPSVISGIGKPKN-KEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGL-PQRK 929
D P ++ G P++ + E KN+ N ++ + +K++ +SE+DSG+ P +K
Sbjct: 663 DPPRIL-GEKAPRHIRNENKNR---YNNSRAARPFTAAAKRKEVSEWDSGMAPSKK 714
Score = 189 bits (479), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 125/182 (68%), Gaps = 2/182 (1%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M I + T +Q++S+ IL DVL++S TGSGKTLAYA+PI+ L PKI R+DG
Sbjct: 193 MKINKATVIQKMSVGHILKRKDVLIKSPTGSGKTLAYALPILHLLMNETPKIKREDGTRV 252
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VII PTRELALQT + L K+ +IVP L GGEK KSEKAR+RKGI ++V TPGRL+
Sbjct: 253 VIITPTRELALQTYQCLELLSKACQYIVPGVLMGGEKKKSEKARLRKGIVVMVGTPGRLI 312
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS--ILLSATLT 178
DH HT + F + LV+DEADR+L+ G+E+ I+ +E +K++ S ILLSATLT
Sbjct: 313 DHLDHTSSFSFGTADWLVIDEADRMLEMGFEQSISRIIESWRKERAGKASNAILLSATLT 372
Query: 179 PA 180
P
Sbjct: 373 PG 374
>gi|449668048|ref|XP_004206700.1| PREDICTED: probable ATP-dependent RNA helicase ddx31-like [Hydra
magnipapillata]
Length = 912
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/554 (43%), Positives = 332/554 (59%), Gaps = 29/554 (5%)
Query: 361 ISSLFQNNPDIPNV-PTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQ 419
ISSLF NPDIP V + V E +F+ + + P I ++ NL + +T +Q
Sbjct: 66 ISSLFNKNPDIPQVISNNNVSNVEEVVFSSENVSDLP-ISDRLRNNLRDQFKFKSLTQIQ 124
Query: 420 QLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELA 479
+SI P+L+G D +++S TGSGKT YAIPII K+ +M+P I R+DG +A+II+PTRELA
Sbjct: 125 MISIPPLLNGKDAMIKSPTGSGKTFCYAIPIIDKIIKMKPSIGRQDGPFALIIVPTRELA 184
Query: 480 LQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLK 539
LQT I LCKS IVP L GGEK KSEKAR+RKGI+I+VATPGR H K T L
Sbjct: 185 LQTFNIVQDLCKSCISIVPGMLIGGEKCKSEKARLRKGINIIVATPGRFQYHLKETSCLN 244
Query: 540 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-QFQSILLSATLTPAVQRLAGMTL 598
SK+++LVLDEAD++L G+E+ I E L L + + QS+LLSATL+ ++ LA ++L
Sbjct: 245 VSKIKYLVLDEADKLLSMGFEKTIKEILGFLDQHSSLKRQSVLLSATLSKDIENLASLSL 304
Query: 599 QNPIQIDAADSTDIH-NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 657
N + +D++ D V+P SL Q+F+ P KLRLV + FI C N E+
Sbjct: 305 SNHVFVDSSKKDDFDPKAIHEYVVPSSLTQYFVTVPAKLRLVTIFCFI---CDNAFV-EK 360
Query: 658 SKMLVFMATQDMADYHTELLSTVLGE-----NIAF---FKLHGSMSQSERTEVFKTFRSV 709
K++VF++ ++ +H E L L E + F + LHG M+Q +R + F F+
Sbjct: 361 KKIIVFVSNKNSVHFHYEALKLFLAEVDTHSEMLFKNVYMLHGDMTQEQRFKNFDLFKES 420
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV 769
GVL CTDV ARGLD+ VDWIVQY+ P+ DY+HRVGRTAR+G +G SLLFL+PSEV
Sbjct: 421 SFGVLFCTDVGARGLDIKKVDWIVQYSCPTQFEDYLHRVGRTARIGEKGKSLLFLLPSEV 480
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
V+ L + + + E+ L + L++ + K S +E T LQ E +
Sbjct: 481 GYVKFLNDSLVILNEVDLFNVLKDFIIKKY----SCKTQNKIEEKVTYLQNIIELECTKS 536
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI-------- 881
K A Y S+++ Y+SY ++ +F+ K +HLGH AKSF LRDAP+ +
Sbjct: 537 KNFKQLAISAYNSFIQSYSSYPSTVKEMFHVKNLHLGHIAKSFGLRDAPNKLVNQVAMQP 596
Query: 882 SGIG-KPKNKEELK 894
+GI K KN EE K
Sbjct: 597 AGIKRKQKNDEENK 610
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 176/326 (53%), Gaps = 67/326 (20%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +SI P+L+G D +++S TGSGKT YAIPII K+ +M+P I R+DG +A+II+P
Sbjct: 120 LTQIQMISIPPLLNGKDAMIKSPTGSGKTFCYAIPIIDKIIKMKPSIGRQDGPFALIIVP 179
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELALQT I LCKS IVP L GGEK KSEKAR+RKGI+I+VATPGR H K
Sbjct: 180 TRELALQTFNIVQDLCKSCISIVPGMLIGGEKCKSEKARLRKGINIIVATPGRFQYHLKE 239
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-QFQSILLSATLTPATCWC 184
T L SK+++LVLDEAD++L G+E+ I E L L + + QS+LLSATL+
Sbjct: 240 TSCLNVSKIKYLVLDEADKLLSMGFEKTIKEILGFLDQHSSLKRQSVLLSATLS------ 293
Query: 185 KHTETL-KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQ 243
K E L S H+ +D + +
Sbjct: 294 KDIENLASLSLSNHVFVDSSKK-------------------------------------- 315
Query: 244 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
D D IH V+P SL Q+F+ P KLRLV + FI C N
Sbjct: 316 -------------DDFDPKAIH----EYVVPSSLTQYFVTVPAKLRLVTIFCFI---CDN 355
Query: 304 VNEDEESKMLVFMATQDMADYHTELL 329
E+ K++VF++ ++ +H E L
Sbjct: 356 AFV-EKKKIIVFVSNKNSVHFHYEAL 380
>gi|198431984|ref|XP_002127467.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 31
[Ciona intestinalis]
Length = 728
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/620 (40%), Positives = 360/620 (58%), Gaps = 49/620 (7%)
Query: 357 KSGPI-SSLFQNNPDIP--NVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNIT 413
K G I SSLF NP+IP N+P P + AP + +H ++ ++E + T
Sbjct: 104 KQGKIRSSLFSANPEIPALNLPVVNDAPKKTIISAPVTSFSHLNLHLGIESYISEKLEFT 163
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
+T VQ S+ +LDG D L+RSQTGSGKT+AYA+ ++Q LQ + P+I+R DG A++ +
Sbjct: 164 DMTEVQSKSLPVLLDGKDALIRSQTGSGKTIAYALAVVQNLQGLVPRITRMDGPAALVFV 223
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELALQ+ E+F++L IV + + GG+K KSEKAR+RKG +I+V+TPGR +DH +
Sbjct: 224 PTRELALQSYEVFSRLTLPVRRIVATCVVGGQKRKSEKARLRKGSNIIVSTPGRFIDHIE 283
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK-PQFQSILLSATLTPAVQR 592
+T L +KV+ ++ DEADR+LD G+++DI + L +K+Q + Q +LLSATLT V+
Sbjct: 284 NTHCLSLAKVKWIIFDEADRLLDMGFQKDINKILTAVKEQTGTKQQVVLLSATLTKGVEN 343
Query: 593 LAGMTLQNPIQIDA----ADSTDIHNTTDSLV--------IPDSLKQHFIVTPPKLRLVA 640
L + L NP+ I+ A + D L +P L Q + P KLRLV
Sbjct: 344 LVNLALTNPVHIETEAGKAKEKNAQIFVDPLTGLNVEKVPLPSKLTQSVTIVPSKLRLVT 403
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG--------ENIAFFKLHG 692
L +FI KC V E + K+LVF++ +D ++H LL + G + + FF+LHG
Sbjct: 404 LVAFINKKC--VIEG-DGKLLVFLSCRDSVEFHFRLLKNMKGVLNNAISDKKLGFFQLHG 460
Query: 693 SMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTA 752
M+Q ER +R KSGVL+CTDVA+RGLD+P VDW+VQ+T+P + DYVHRVGRTA
Sbjct: 461 GMTQPERNSTINGYRCAKSGVLLCTDVASRGLDIPKVDWVVQHTSPGNPVDYVHRVGRTA 520
Query: 753 RVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVE 812
R G G +LL L P+EV+ V+ L I +E+KL++ L LL K + ++ +
Sbjct: 521 RAGKAGHALLILSPAEVEYVKLLTKFDIVAKELKLEEILFGLLEKKQQSINYKIRIQLGK 580
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
A+ + E V K L A K + ++VR YA+Y L+HIF+ + +HLGH AKSF
Sbjct: 581 EEASKVHRELEELVHGDKSLKEFAGKAFVAYVRSYATYPAALKHIFHVQNLHLGHVAKSF 640
Query: 873 ALRDAPS-------------VISGIGKPK----NKEELKNKKMAINKEKSFKQRGN---- 911
AL++APS I I + K N E NK I EK K++G
Sbjct: 641 ALQEAPSEFLHNLKKTVGAHAIRQIRRKKSNMENSETENNKTDDITVEKEIKKKGTKRHP 700
Query: 912 -FSKKQMLSEFDSGLPQRKP 930
+K ++SEF SG+ P
Sbjct: 701 IVAKFDLMSEFSSGITDFSP 720
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 187/336 (55%), Gaps = 53/336 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ S+ +LDG D L+RSQTGSGKT+AYA+ ++Q LQ + P+I+R DG A
Sbjct: 160 LEFTDMTEVQSKSLPVLLDGKDALIRSQTGSGKTIAYALAVVQNLQGLVPRITRMDGPAA 219
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++ +PTRELALQ+ E+F++L IV + + GG+K KSEKAR+RKG +I+V+TPGR +
Sbjct: 220 LVFVPTRELALQSYEVFSRLTLPVRRIVATCVVGGQKRKSEKARLRKGSNIIVSTPGRFI 279
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK-PQFQSILLSATLTP 179
DH ++T L +KV+ ++ DEADR+LD G+++DI + L +K+Q + Q +LLSATLT
Sbjct: 280 DHIENTHCLSLAKVKWIIFDEADRLLDMGFQKDINKILTAVKEQTGTKQQVVLLSATLTK 339
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
VE+L V L+ T
Sbjct: 340 G--------------VENL---------------------------------VNLALTNP 352
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
++ AG + QI T ++ + + +P L Q + P KLRLV L +FI
Sbjct: 353 VHIETEAGKAKEKNAQIFVDPLTGLN--VEKVPLPSKLTQSVTIVPSKLRLVTLVAFINK 410
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKI 335
KC V E + K+LVF++ +D ++H LL K +
Sbjct: 411 KC--VIEG-DGKLLVFLSCRDSVEFHFRLLKNMKGV 443
>gi|91092300|ref|XP_969217.1| PREDICTED: similar to CG8611 CG8611-PA [Tribolium castaneum]
Length = 624
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/543 (43%), Positives = 337/543 (62%), Gaps = 23/543 (4%)
Query: 347 NYEIPKKTEVKSGPIS-SLFQ-NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKK 404
N +I K + KS S SLF + DI + K V E +F+ IH ++
Sbjct: 83 NQQISKGSGDKSATTSYSLFAVRHKDIYVNTNIKGKSVVEKVFSGEKKFSDLQIHKYLVA 142
Query: 405 NLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
NL + + +T VQ+ +I IL G +VL+RSQTGSGKTLAYA+PI+ L + P++ R+
Sbjct: 143 NLQK-HSFVNLTNVQERAIPEILAGKNVLIRSQTGSGKTLAYALPIMNALLSVEPRLQRQ 201
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
DG+ A+I++PTRELALQT EIF K+ +F W+V L GGE K+EK ++RKG+ +++ T
Sbjct: 202 DGVQAIIVVPTRELALQTHEIFGKI-NTFQWLVIGHLCGGENRKTEKDKLRKGVHVVIGT 260
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 584
PGRLLDH HT K V+ LVLDEADR+LD G+++DI + +E L + K + Q+ILLSA
Sbjct: 261 PGRLLDHILHTSAFKTENVKCLVLDEADRLLDMGFKKDIVKIVEALDRTKQKRQTILLSA 320
Query: 585 TLTPAVQRLAGMTLQNPIQIDAAD-STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
TL + LA ++N ID D S DI+ D +VIP+++ Q FI+T K RL L++
Sbjct: 321 TLNKGIAELADFLMKNHTYIDTLDDSPDIN--PDHMVIPNTVTQEFIMTHIKHRLFTLSA 378
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
+L K ++ K+ VFMAT M ++ V+ FFKLHG+M Q R +VF
Sbjct: 379 VLLAKAKH-------KVFVFMATSQMDFEDSDEEEEVV-LESEFFKLHGNMDQGARKKVF 430
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F++ K G+L+CTDVAARG+D+P D I+QYT P S DY+HRVGRT R G GSSL+F
Sbjct: 431 MGFKAAKRGILLCTDVAARGVDVPEADCIIQYTGPQSDDDYLHRVGRTGRAGKSGSSLIF 490
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L E + + LQ+ ++ ++E + + L++L ++ E + E AATALQ FE
Sbjct: 491 LTHEEQEYIARLQDHKVFLKERQSSEFLKHLCTLMEEPE--------EEKAATALQRRFE 542
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+A+ + K LH AC Y+SW RFY ++ LR IFNFK ++LGH+ SF LR+ PS ++
Sbjct: 543 TALTKDKDLHRLACFAYSSWSRFYNTFPGQLRSIFNFKTVNLGHYVTSFGLRETPSSVAR 602
Query: 884 IGK 886
I K
Sbjct: 603 IVK 605
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 177/321 (55%), Gaps = 72/321 (22%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ +T VQ+ +I IL G +VL+RSQTGSGKTLAYA+PI+ L + P++ R+DG+ A+
Sbjct: 148 SFVNLTNVQERAIPEILAGKNVLIRSQTGSGKTLAYALPIMNALLSVEPRLQRQDGVQAI 207
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I++PTRELALQT EIF K+ +F W+V L GGE K+EK ++RKG+ +++ TPGRLLD
Sbjct: 208 IVVPTRELALQTHEIFGKI-NTFQWLVIGHLCGGENRKTEKDKLRKGVHVVIGTPGRLLD 266
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H HT K V+ LVLDEADR+LD G+++DI + +E L + K + Q+ILLSATL
Sbjct: 267 HILHTSAFKTENVKCLVLDEADRLLDMGFKKDIVKIVEALDRTKQKRQTILLSATLN--- 323
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
+ IAE + L
Sbjct: 324 -------------------------------KGIAELADFL------------------- 333
Query: 242 VQRLAGMTLQNPIQIDAA-DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
++N ID DS DI+ D +VIP+++ Q FI+T K RL L++ +L K
Sbjct: 334 --------MKNHTYIDTLDDSPDIN--PDHMVIPNTVTQEFIMTHIKHRLFTLSAVLLAK 383
Query: 301 CQNVNEDEESKMLVFMATQDM 321
++ K+ VFMAT M
Sbjct: 384 AKH-------KVFVFMATSQM 397
>gi|270001205|gb|EEZ97652.1| hypothetical protein TcasGA2_TC016196 [Tribolium castaneum]
Length = 683
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 243/601 (40%), Positives = 343/601 (57%), Gaps = 80/601 (13%)
Query: 347 NYEIPKKTEVKSGPIS-SLFQ-NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKK 404
N +I K + KS S SLF + DI + K V E +F+ IH ++
Sbjct: 83 NQQISKGSGDKSATTSYSLFAVRHKDIYVNTNIKGKSVVEKVFSGEKKFSDLQIHKYLVA 142
Query: 405 NLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
NL + + +T VQ+ +I IL G +VL+RSQTGSGKTLAYA+PI+ L + P++ R+
Sbjct: 143 NLQK-HSFVNLTNVQERAIPEILAGKNVLIRSQTGSGKTLAYALPIMNALLSVEPRLQRQ 201
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
DG+ A+I++PTRELALQT EIF K+ +F W+V L GGE K+EK ++RKG+ +++ T
Sbjct: 202 DGVQAIIVVPTRELALQTHEIFGKI-NTFQWLVIGHLCGGENRKTEKDKLRKGVHVVIGT 260
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-------------- 570
PGRLLDH HT K V+ LVLDEADR+LD G+++DI + +E L
Sbjct: 261 PGRLLDHILHTSAFKTENVKCLVLDEADRLLDMGFKKDIVKIVEALDRTKQHSDYDPMAM 320
Query: 571 ------------KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA-ADSTDIHNTTD 617
K Q+ + Q+ILLSATL + LA ++N ID DS DI+ D
Sbjct: 321 LLHKKTQVKVESKNQEKKRQTILLSATLNKGIAELADFLMKNHTYIDTLDDSPDIN--PD 378
Query: 618 SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 677
+VIP+++ Q FI+T K RL L++ +L K ++ K+ VFMAT M DYH +L
Sbjct: 379 HMVIPNTVTQEFIMTHIKHRLFTLSAVLLAKAKH-------KVFVFMATSQMVDYHYDLF 431
Query: 678 STV------------LGE--------------------NIAFFKLHGSMSQSERTEVFKT 705
+ +GE FFKLHG+M Q R +VF
Sbjct: 432 TKYFAKMPKNRGKLKIGEVAVLENEDFEDSDEEEEVVLESEFFKLHGNMDQGARKKVFMG 491
Query: 706 FRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLI 765
F++ K G+L+CTDVAARG+D+P D I+QYT P S DY+HRVGRT R G GSSL+FL
Sbjct: 492 FKAAKRGILLCTDVAARGVDVPEADCIIQYTGPQSDDDYLHRVGRTGRAGKSGSSLIFLT 551
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
E + + LQ+ ++ ++E + + L++L ++ E + E AATALQ FE+A
Sbjct: 552 HEEQEYIARLQDHKVFLKERQSSEFLKHLCTLMEEPE--------EEKAATALQRRFETA 603
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + K LH AC Y+SW RFY ++ LR IFNFK ++LGH+ SF LR+ PS ++ I
Sbjct: 604 LTKDKDLHRLACFAYSSWSRFYNTFPGQLRSIFNFKTVNLGHYVTSFGLRETPSSVARIV 663
Query: 886 K 886
K
Sbjct: 664 K 664
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 191/330 (57%), Gaps = 46/330 (13%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ +T VQ+ +I IL G +VL+RSQTGSGKTLAYA+PI+ L + P++ R+DG+ A+
Sbjct: 148 SFVNLTNVQERAIPEILAGKNVLIRSQTGSGKTLAYALPIMNALLSVEPRLQRQDGVQAI 207
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I++PTRELALQT EIF K+ +F W+V L GGE K+EK ++RKG+ +++ TPGRLLD
Sbjct: 208 IVVPTRELALQTHEIFGKI-NTFQWLVIGHLCGGENRKTEKDKLRKGVHVVIGTPGRLLD 266
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H HT K V+ LVLDEADR+LD G+++DI + +E L + K
Sbjct: 267 HILHTSAFKTENVKCLVLDEADRLLDMGFKKDIVKIVEALDRTK---------------- 310
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
+H D +L + + + K Q+ + Q++LLSATL
Sbjct: 311 --------------QHSDYDPMAMLLHKKTQVKVES-----KNQEKKRQTILLSATLNKG 351
Query: 242 VQRLAGMTLQNPIQIDA-ADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ LA ++N ID DS DI+ D +VIP+++ Q FI+T K RL L++ +L K
Sbjct: 352 IAELADFLMKNHTYIDTLDDSPDIN--PDHMVIPNTVTQEFIMTHIKHRLFTLSAVLLAK 409
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ K+ VFMAT M DYH +L +
Sbjct: 410 AKH-------KVFVFMATSQMVDYHYDLFT 432
>gi|312382750|gb|EFR28096.1| hypothetical protein AND_04377 [Anopheles darlingi]
Length = 710
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/535 (42%), Positives = 324/535 (60%), Gaps = 75/535 (14%)
Query: 370 DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
D+P V ++P+ E +F+ + + I+ KKN+ + ++ T +T VQ ++I +L+G
Sbjct: 131 DMPKVELPAVQPLKEQVFSEQTIDSL-AIYAHSKKNIVDLLHYTHLTVVQSMAIPRLLEG 189
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
D L+R+QTGSGKTLAYA+P+I+ L +RPK SR DGI AV+I+PTRELALQT E+ KL
Sbjct: 190 RDALIRAQTGSGKTLAYAVPMIEALHSVRPKTSRTDGIRAVVIVPTRELALQTYELLVKL 249
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
K +TW+V S+L GGEK K+EKAR+R G++IL+ TPGR DH ++T +LK + V LVLD
Sbjct: 250 LKPYTWLVASYLCGGEKRKTEKARLRAGLNILIGTPGRFCDHIRNTASLKLNGVRWLVLD 309
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQ-------FQSILLSATLTPAVQRLAGMTLQNPI 602
EADR+L+ GYE+D+ E + ++ + + Q++LLSATLT +V+ LAG+TL +P+
Sbjct: 310 EADRLLELGYEKDVKEIVGAIQNGRSESGTDGAVLQTVLLSATLTASVKELAGLTLHDPV 369
Query: 603 QIDAAD-------------------STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
++ ++ S + N + + IPD++KQ ++V PPKLRLV L+
Sbjct: 370 YVETSEAIRNRQSSQLGVNGGAMVFSEHLLNVDECVTIPDTVKQRYLVIPPKLRLVTLSG 429
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELL-------------------------- 677
I + + SK LVFMATQD+ D+H +++
Sbjct: 430 LIAAE----QRKKASKALVFMATQDLVDFHYDIMVEVLTRKRLDSEDEREDEAEDEENVS 485
Query: 678 ----------STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLP 727
++VL + FFKLHG MSQ ER+ VF+ FR K+ VL+CTDVAARG+D+P
Sbjct: 486 EKEDDDDDEGNSVLLPQLTFFKLHGRMSQVERSSVFQEFRKAKAAVLLCTDVAARGIDVP 545
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
VD +VQY AP DYVHRVGRTAR G G ++LF+ P+EV+ ++ L ++IRI+E K+
Sbjct: 546 AVDLVVQYHAPQILADYVHRVGRTARAGQSGKAVLFIEPAEVEFIKYLAEKQIRIQEEKI 605
Query: 788 KD---CLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKG 839
CL LL + + R+A N E AA LQ FE V + L SA KG
Sbjct: 606 DGIFVCLGQLLKCRQK----RIAR-NKEKAAVELQHRFEVLVANESELFASASKG 655
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 197/336 (58%), Gaps = 53/336 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++ T +T VQ ++I +L+G D L+R+QTGSGKTLAYA+P+I+ L +RPK SR DGI A
Sbjct: 170 LHYTHLTVVQSMAIPRLLEGRDALIRAQTGSGKTLAYAVPMIEALHSVRPKTSRTDGIRA 229
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I+PTRELALQT E+ KL K +TW+V S+L GGEK K+EKAR+R G++IL+ TPGR
Sbjct: 230 VVIVPTRELALQTYELLVKLLKPYTWLVASYLCGGEKRKTEKARLRAGLNILIGTPGRFC 289
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ-------FQSILL 173
DH ++T +LK + V LVLDEADR+L+ GYE+D+ E + ++ + + Q++LL
Sbjct: 290 DHIRNTASLKLNGVRWLVLDEADRLLELGYEKDVKEIVGAIQNGRSESGTDGAVLQTVLL 349
Query: 174 SATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVL 233
SATLT + K L ++ EA R +Q Q
Sbjct: 350 SATLTAS---VKELAGLTLHDPVYVETSEAIR-----------------NRQSSQL---- 385
Query: 234 LSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 293
V A + ++ + +D + + IPD++KQ ++V PPKLRLV L
Sbjct: 386 -------GVNGGAMVFSEHLLNVD-----------ECVTIPDTVKQRYLVIPPKLRLVTL 427
Query: 294 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
+ I + + SK LVFMATQD+ D+H +++
Sbjct: 428 SGLIAAE----QRKKASKALVFMATQDLVDFHYDIM 459
>gi|348690718|gb|EGZ30532.1| hypothetical protein PHYSODRAFT_477816 [Phytophthora sojae]
Length = 690
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/609 (38%), Positives = 352/609 (57%), Gaps = 65/609 (10%)
Query: 361 ISSLFQNNPDIPNVPTRRL-KPVSEALFAPTSYEEFPGIHPF---MKKNLN-EGMNITQV 415
+ Q+ I NV ++ L SE +FA ++E +KK+ + G +
Sbjct: 75 VEKFTQSRVQIDNVLSKPLTSSSSEKIFAANTFESMNMAEKLVNVLKKDASCGGFGFARP 134
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T VQ +I +L G D+LV+S+TGSGKTL+Y +PI+QKLQ + P+I R+DG A+++ PT
Sbjct: 135 TNVQVQTIPSVLKGNDILVKSETGSGKTLSYLLPIVQKLQSVSPRIQRQDGCMALVLAPT 194
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
REL Q +E KL + F ++VP + GGEK K+EKAR+RKGI+IL+ATPGRL DH +T
Sbjct: 195 RELCTQIMETANKLIQPFVFLVPGAIIGGEKKKAEKARLRKGITILIATPGRLADHLVNT 254
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP--QFQSILLSATLTPAVQRL 593
++ +++++ LVLDEADR+LD G+E+ I + L IL QK + Q+IL+SAT+ VQ+L
Sbjct: 255 QSFNYTQLQFLVLDEADRLLDMGFEKQITQILSILDGQKSAKKRQNILVSATINSGVQQL 314
Query: 594 AGMTLQNPIQIDAADSTDIHN--------TTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
A M+L NP+ IDA T + + + P L QHF++ P K RL AL F+
Sbjct: 315 AKMSLSNPVLIDADAVTSGEDAATEIKARSQEKFSTPHQLMQHFMLVPAKARLCALTCFL 374
Query: 646 LGKCQNVNEDE-------ESKMLVFMATQDMADYHTEL---------------------- 676
+ ++ D + K++VF++T D D+H L
Sbjct: 375 REELRHAPRDNKKDGGPGKCKIVVFLSTCDAVDFHYALFRKCAWPSGKGSSEEADSSGGN 434
Query: 677 -LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
++++ G F+LHG++ Q ER FK+F S SGVL+CTDVAARGL+LP V WIVQY
Sbjct: 435 GVASLFGSQGPVFRLHGNIPQQERVTTFKSFCSSSSGVLLCTDVAARGLNLPTVKWIVQY 494
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQ--- 792
P+ + DYVHRVGRTAR G++GSSLLFL+PSE + ++ L + +++ + L+ +
Sbjct: 495 DPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLTKQGLKLNALSLEKTIARVG 554
Query: 793 ---NLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYAS 849
L+ + L + G+ LQ +E +L K L AC+ + S+VR YA+
Sbjct: 555 KHGGFLTTSRKKLLHEVVQGD-------LQFLYEQTLLADKELFELACQAFHSFVRSYAT 607
Query: 850 YSKDLRHIFNFKQIHLGHFAKSFALRDAPSV--ISGIGKPKNKEELKNKKMAINKEKSFK 907
+S D R IF+ + +H GH AKSFALR+ P+ + G+ K L+ + KE+ K
Sbjct: 608 HSSDTRQIFHVRSLHFGHVAKSFALREPPASAKLRDTGRNAKKGTLQKR-----KERDDK 662
Query: 908 QRGNFSKKQ 916
Q+ +KKQ
Sbjct: 663 QQAVIAKKQ 671
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 181/332 (54%), Gaps = 62/332 (18%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I +L G D+LV+S+TGSGKTL+Y +PI+QKLQ + P+I R+DG A+++ PT
Sbjct: 135 TNVQVQTIPSVLKGNDILVKSETGSGKTLSYLLPIVQKLQSVSPRIQRQDGCMALVLAPT 194
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL Q +E KL + F ++VP + GGEK K+EKAR+RKGI+IL+ATPGRL DH +T
Sbjct: 195 RELCTQIMETANKLIQPFVFLVPGAIIGGEKKKAEKARLRKGITILIATPGRLADHLVNT 254
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP--QFQSILLSATLTPATCWC 184
++ +++++ LVLDEADR+LD G+E+ I + L IL QK + Q+IL+SAT+
Sbjct: 255 QSFNYTQLQFLVLDEADRLLDMGFEKQITQILSILDGQKSAKKRQNILVSATINSG---- 310
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+ L + + VL +AD + D A EI + + +F +
Sbjct: 311 --VQQLAKMSLSNPVLIDADAVTS---GEDAA--TEIKARSQEKFST------------- 350
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
P L QHF++ P K RL AL F+ + ++
Sbjct: 351 -----------------------------PHQLMQHFMLVPAKARLCALTCFLREELRHA 381
Query: 305 NEDE-------ESKMLVFMATQDMADYHTELL 329
D + K++VF++T D D+H L
Sbjct: 382 PRDNKKDGGPGKCKIVVFLSTCDAVDFHYALF 413
>gi|301119351|ref|XP_002907403.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262105915|gb|EEY63967.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 685
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/612 (39%), Positives = 353/612 (57%), Gaps = 54/612 (8%)
Query: 345 PDNYEIPKKTEVKSGP------ISSLFQNNPDIPNVPTRRL-KPVSEALFAPTSYEEFPG 397
P N E PK + P + Q+ I NV ++ L SE +FA ++E
Sbjct: 52 PKN-EAPKTFGTRRNPNKEGYSVEKFTQSRVKIDNVLSKPLTSSSSEKIFAANTFESMQM 110
Query: 398 ----IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQK 453
++ K G + T VQ +I IL G D+LV+S+TGSGKTL+Y +PI+QK
Sbjct: 111 SEKLVNVLKKDTERGGFGFARPTNVQVQTIPSILKGNDILVKSETGSGKTLSYLLPIVQK 170
Query: 454 LQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKAR 513
LQ + P I R+DG A+I+ PTREL Q LE +L + F ++VP + GGEK K+EKAR
Sbjct: 171 LQAVSPCIQRQDGCMALILAPTRELCTQILETANRLIQPFVFLVPGAIIGGEKKKAEKAR 230
Query: 514 IRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--K 571
+RKGI ILVATPGRL DH +T + +S+++ LVLDEADR+LD G+E+ I + L IL K
Sbjct: 231 LRKGIIILVATPGRLADHLVNTLSFNYSRLQFLVLDEADRLLDMGFEKQITQILTILDGK 290
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA-------ADSTDIHNT-TDSLVIPD 623
K + Q+IL+SAT+ VQ+LA M+L P+ IDA ++D+ + + P
Sbjct: 291 KTSQKRQNILVSATVNSGVQQLAKMSLSKPVLIDADALTSGEEPASDMKSARQEKFFTPH 350
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDE-------ESKMLVFMATQDMADYHTEL 676
L QHF++ P K RL AL F+ + ++ D + K++VF++T D D+H L
Sbjct: 351 QLMQHFMLVPAKTRLCALTCFLRKELRHAPRDHKKDGSPGKCKIVVFLSTCDAVDFHYAL 410
Query: 677 --------------------LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLIC 716
++++ G F+LHG++ Q ER FK+F S SGVL+C
Sbjct: 411 FRKCAWPSGKGASEESESSGVASLFGSQGPIFRLHGNIPQQERVTTFKSFCSSGSGVLLC 470
Query: 717 TDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ 776
TDVAARGL+LP V WIVQY P+ + DYVHRVGRTAR G++GSSLLFL+PSE + ++ L
Sbjct: 471 TDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLS 530
Query: 777 NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV-ETAATALQMSFESAVLQQKILHTS 835
+ +++ + L+ + + K G L+ + E + LQ +E +L K L
Sbjct: 531 KQGLKLNALSLEKTVSRV--GKYGGFLTTSRKKLLHEVVQSDLQFLYEQTLLADKELFEL 588
Query: 836 ACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP--SVISGIGKPKNKEEL 893
AC+ + S+VR YA++S D R+IF+ + +HLGH AKSFALRD P S + G+ K L
Sbjct: 589 ACQAFHSFVRSYATHSSDTRNIFHVRSLHLGHVAKSFALRDPPASSKLRNTGRNAKKGTL 648
Query: 894 KNKKMAINKEKS 905
+K +K+++
Sbjct: 649 HKRKERDDKQQA 660
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 180/340 (52%), Gaps = 78/340 (22%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I IL G D+LV+S+TGSGKTL+Y +PI+QKLQ + P I R+DG A+I+ PT
Sbjct: 133 TNVQVQTIPSILKGNDILVKSETGSGKTLSYLLPIVQKLQAVSPCIQRQDGCMALILAPT 192
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL Q LE +L + F ++VP + GGEK K+EKAR+RKGI ILVATPGRL
Sbjct: 193 RELCTQILETANRLIQPFVFLVPGAIIGGEKKKAEKARLRKGIIILVATPGRL------- 245
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKH 186
+HLV +
Sbjct: 246 -------ADHLV-----------------------------------------------N 251
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKPQFQSVLLSATLTPAVQR 244
T + +S+++ LVLDEADR+LD G+E+ I + L IL KK + Q++L+SAT+ VQ+
Sbjct: 252 TLSFNYSRLQFLVLDEADRLLDMGFEKQITQILTILDGKKTSQKRQNILVSATVNSGVQQ 311
Query: 245 LAGMTLQNPIQIDA-------ADSTDIHNT-TDSLVIPDSLKQHFIVTPPKLRLVALASF 296
LA M+L P+ IDA ++D+ + + P L QHF++ P K RL AL F
Sbjct: 312 LAKMSLSKPVLIDADALTSGEEPASDMKSARQEKFFTPHQLMQHFMLVPAKTRLCALTCF 371
Query: 297 ILGKCQNVNEDE-------ESKMLVFMATQDMADYHTELL 329
+ + ++ D + K++VF++T D D+H L
Sbjct: 372 LRKELRHAPRDHKKDGSPGKCKIVVFLSTCDAVDFHYALF 411
>gi|395741108|ref|XP_003780670.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX31 [Pongo abelii]
Length = 755
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/587 (41%), Positives = 336/587 (57%), Gaps = 65/587 (11%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPD+P + +K V E +F + E G+HP + +N + ++ +T+VQ+
Sbjct: 98 SSLFKNNPDVPELHRPMVKQVQEKVFTSAVFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 156
Query: 422 SIQPILDGGDVLVRSQTGSG--KTLAYAIPIIQKLQEMRPKI-SRKDGIYAVIILPTREL 478
SI +L+G D LVRSQTG KTLAY IP++Q + M KI R DG YA++++PTREL
Sbjct: 157 SIPVLLEGRDALVRSQTGLRLVKTLAYCIPVVQSFKAMESKIQGRSDGPYALVLVPTREL 216
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTE-T 537
ALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K+ +
Sbjct: 217 ALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHYKNPQRN 276
Query: 538 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMT 597
+ FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT AG+
Sbjct: 277 IHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAEWQKRQNVLLSATLTERCN-AAGLI 335
Query: 598 --LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPK-------------------- 635
L +P+ S + + + P + PP
Sbjct: 336 SDLHDPV------SXSVLKKSHDQLSPKEKAVQEVCPPPAGDELDSFANYRRVLEQQRDC 389
Query: 636 -----LRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE--LLSTVLGEN---- 684
V LA+FIL KC+ +++ KM+VF ++ ++ ++H L T+L +
Sbjct: 390 GSQQIXGFVCLAAFILQKCKF---EKDQKMVVFFSSCELVEFHYSKLFLQTLLSSSGAPA 446
Query: 685 ----------IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQ 734
I + +LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQ
Sbjct: 447 SGQLPSASTQIKYLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQ 506
Query: 735 YTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL--- 791
Y APSS Y+HR +TAR+G GSSLL L PSE + V L + +I + EIK++D L
Sbjct: 507 YNAPSSPAXYIHRDWKTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVL 566
Query: 792 --QNLLSVKMEGDLSRLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
+ K G A G + AT LQM FE V + + A K S++R Y
Sbjct: 567 TRDDCFKGKRSGAQKSHAVGPQEIRERATVLQMVFEDYVHSSERRVSWAKKALQSFIRAY 626
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK 894
A+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K +K
Sbjct: 627 ATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVK 673
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 132/182 (72%), Gaps = 4/182 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSG--KTLAYAIPIIQKLQEMRPKI-SRKDG 57
+ ++ +T+VQ+ SI +L+G D LVRSQTG KTLAY IP++Q + M KI R DG
Sbjct: 145 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGLRLVKTLAYCIPVVQSFKAMESKIQGRSDG 204
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
YA++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPG
Sbjct: 205 PYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPG 264
Query: 118 RLLDHCKHTE-TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
RL+DH K+ + + FS++ LV DEADRILD G+E+DI L + + + Q++LLSAT
Sbjct: 265 RLVDHYKNPQRNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAEWQKRQNVLLSAT 324
Query: 177 LT 178
LT
Sbjct: 325 LT 326
>gi|297269990|ref|XP_002808140.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX31-like [Macaca mulatta]
Length = 777
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/588 (40%), Positives = 337/588 (57%), Gaps = 106/588 (18%)
Query: 339 KEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGI 398
K++++ P + ++ +K+ SSLF+NNPDIP + +K V E +F ++ E G+
Sbjct: 182 KKHSVSPSDRNQEERPCIKT---SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GL 237
Query: 399 HPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
HP + +N + ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+
Sbjct: 238 HPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMK 297
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 518
KI R DG YA++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI
Sbjct: 298 SKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGI 357
Query: 519 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 578
+IL++TPGRL+DH K T+ + FS++ LV DEADRILD G+ERDI L + + + Q
Sbjct: 358 NILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFERDITVILNAVNAECQKRQ 417
Query: 579 SILLSATLTPAVQRLAGMTLQNPIQIDAAD-STDIHNTTDSLV----------------I 621
++LLSATLT V RLA ++L +P+ I D S D N D V I
Sbjct: 418 NVLLSATLTEGVTRLADISLHDPVSISVLDKSHDQLNPKDKAVREVCPPRTGDELDNFAI 477
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTV 680
P+SL+QH V P KLRLV LA+FIL KC+ +++ KM+VF ++ ++ ++H L L T+
Sbjct: 478 PESLEQHVTVVPSKLRLVCLAAFILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTL 534
Query: 681 LGENIA--------------FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
L + A F +LHG+M Q ERT VF+ F + GVL+CTDVAARGLDL
Sbjct: 535 LSSSGAPASGQLPSASTRLKFLRLHGNMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDL 594
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
P V WIVQ + H VG P E++ R + +
Sbjct: 595 PQVTWIVQKS---------HAVG----------------PQEIR-------ERATVLQTV 622
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
+D + + ++ V A ALQ S+++
Sbjct: 623 FEDYVHS-------------SERRVSWAKKALQ----------------------SFIQA 647
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK 894
YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K LK
Sbjct: 648 YATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHLK 695
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M+ KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMKSKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+ERDI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFERDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A E+ +
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA-VREVCPPR--------------- 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
G L N IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 468 -----TGDELDN------------------FAIPESLEQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|10435700|dbj|BAB14644.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/509 (44%), Positives = 306/509 (60%), Gaps = 49/509 (9%)
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
M KI R DG YA++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RK
Sbjct: 1 MESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK 60
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
GI+IL++TPGRL+DH K T+ + FS++ LV DEADRILD G+E+DI L + + +
Sbjct: 61 GINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQK 120
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTD-----------------IHNTTDSL 619
Q++LLSATLT V RLA ++L +P+ I D + + DS
Sbjct: 121 RQNVLLSATLTEGVTRLADISLHDPVSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSF 180
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LS 678
IP+SLKQH V P KLRLV LA+FIL KC+ +E+ KM+VF ++ ++ ++H L L
Sbjct: 181 AIPESLKQHVTVVPSKLRLVCLAAFILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQ 237
Query: 679 TVLGENIA--------------FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
T+L + A F +LHG M Q ERT VF+ F + GVL+CTDVAARGL
Sbjct: 238 TLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGL 297
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
DLP V WIVQY APSS +Y+HR+GRTAR+G GSSLL L PSE + V L + +I + E
Sbjct: 298 DLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASHKINVSE 357
Query: 785 IKLKDCL-----QNLLSVKMEGDLSRLADG--NVETAATALQMSFESAVLQQKILHTSAC 837
IK++D L + K G A G + AT LQ FE V + + A
Sbjct: 358 IKMEDILCVLTRDDCFKGKRWGAQKSHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAK 417
Query: 838 KGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
K S+++ YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K +K
Sbjct: 418 KALQSFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPD 477
Query: 898 MAINKEKSFKQRGNFSKKQML-SEFDSGL 925
+ K + S ++L SE+ SG+
Sbjct: 478 L------HKKTQSKHSLAEILRSEYSSGM 500
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 157/282 (55%), Gaps = 47/282 (16%)
Query: 48 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 107
M KI R DG YA++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RK
Sbjct: 1 MESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK 60
Query: 108 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 167
GI+IL++TPGRL+DH K T+ + FS++ LV DEADRILD G+E+DI L + + +
Sbjct: 61 GINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQK 120
Query: 168 FQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 227
Q++LLSATLT T S + + + D+ DQ +D A
Sbjct: 121 RQNVLLSATLTEGV-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------- 164
Query: 228 QFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPK 287
+ PA +L DS IP+SLKQH V P K
Sbjct: 165 -----VQEVCPPPAGDKL-----------------------DSFAIPESLKQHVTVVPSK 196
Query: 288 LRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
LRLV LA+FIL KC+ +E+ KM+VF ++ ++ ++H L
Sbjct: 197 LRLVCLAAFILQKCKF---EEDQKMVVFFSSCELVEFHYSLF 235
>gi|256081487|ref|XP_002577001.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353229462|emb|CCD75633.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 713
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/635 (39%), Positives = 362/635 (57%), Gaps = 63/635 (9%)
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTEL---LSTKKKIKKLKEYNIDPDNYEIPKKTEV 356
+C NV+ ++S + T A HTE L T K+ KK I +P+K +
Sbjct: 18 RCGNVSGRKQSNPI----TSSNASPHTEAKDKLVTPKEKKKA----ISVGRKSLPEKNAL 69
Query: 357 KSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFP---GIHPFMKKNLNEGMNIT 413
+ G I + P + + ++ +KP E +F+ +++ I P + L +
Sbjct: 70 QFG-IHNKMAETPMLHKMMSQPVKPKIEPVFSSKHWKDMCESLNIFPHLITCLTNRFKMD 128
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
+T +Q+ ++ P++ G DVL+R+QTGSGKTLAYA+P+ +L + P I RKDG +IIL
Sbjct: 129 YLTAIQEAALPPLVGGRDVLLRAQTGSGKTLAYAVPLFDRLINLDPPIERKDGPLGIIIL 188
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
P+RELA QT ++F L ++ IVP L GG K KS+KA +RKGI+IL+ TP R+LDH
Sbjct: 189 PSRELATQTFDVFKILSQACVRIVPGLLVGGMKRKSQKASLRKGINILIGTPKRILDHMG 248
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF----------QSILLS 583
HT TL +++ LV+DEADR+L+ G+ERD+ + +E L +Q F Q++LLS
Sbjct: 249 HTSTLDLRRIQWLVIDEADRLLEMGFERDVKQIVEGLMQQFNCFSTENKSISKIQTVLLS 308
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADS-TDIHNTTDSL------------------VIPDS 624
ATL+P V+ LAG+TL+NP++ +S T+I NT S+ +P
Sbjct: 309 ATLSPGVEALAGITLKNPVRCVVGESETNIPNTQLSMTKASEVELNTQVNNVAEFALPAG 368
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE- 683
LK ++ P KLRLV+LA+F+L KC+ + K++VFMATQD D+H L +VL +
Sbjct: 369 LKHFALIVPWKLRLVSLAAFLLLKCK--YHENGGKLIVFMATQDCVDFHYHLFKSVLCDE 426
Query: 684 -----------NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
N++ ++LHGSM ER F +F S ++GVLI TDVA+RGLDL V W+
Sbjct: 427 SEELISNIPVMNLSIYRLHGSMEHKERESAFSSFSSSQAGVLITTDVASRGLDLASVAWV 486
Query: 733 VQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNR-RIRIEEIKLKDCL 791
VQY DYVHRVGRTAR G G +LLFL P E + + L+++ I ++EI L D L
Sbjct: 487 VQYHVTGGPVDYVHRVGRTARAGGHGKALLFLEPEETEFMNLLKSKVGIEMKEISLPDLL 546
Query: 792 QNLL----SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
Q +L + K G VE + L F AV L + + Y S++R Y
Sbjct: 547 QTVLFHLQNTKHPGKQRPNDCTTVEEGTSQLFHLFLHAVDSDDTLISLSELAYISFLRSY 606
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
AS+S DLR IF FK++HLGH A++F L+ PS ++
Sbjct: 607 ASFSGDLRPIFAFKRLHLGHVARAFCLQKKPSDVA 641
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 188/336 (55%), Gaps = 54/336 (16%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ ++ P++ G DVL+R+QTGSGKTLAYA+P+ +L + P I RKDG +IILP
Sbjct: 130 LTAIQEAALPPLVGGRDVLLRAQTGSGKTLAYAVPLFDRLINLDPPIERKDGPLGIIILP 189
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
+RELA QT ++F L ++ IVP L GG K KS+KA +RKGI+IL+ TP R+LDH H
Sbjct: 190 SRELATQTFDVFKILSQACVRIVPGLLVGGMKRKSQKASLRKGINILIGTPKRILDHMGH 249
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF----------QSILLSA 175
T TL +++ LV+DEADR+L+ G+ERD+ + +E L +Q F Q++LLSA
Sbjct: 250 TSTLDLRRIQWLVIDEADRLLEMGFERDVKQIVEGLMQQFNCFSTENKSISKIQTVLLSA 309
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TL+P E L + + P V S
Sbjct: 310 TLSPGV-----------------------------------EALAGITLKNPVRCVVGES 334
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
T P Q MT + ++++ T ++N + +P LK ++ P KLRLV+LA+
Sbjct: 335 ETNIPNTQ--LSMTKASEVELN----TQVNNVAE-FALPAGLKHFALIVPWKLRLVSLAA 387
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
F+L KC+ + K++VFMATQD D+H L +
Sbjct: 388 FLLLKCK--YHENGGKLIVFMATQDCVDFHYHLFKS 421
>gi|195567407|ref|XP_002107252.1| GD17360 [Drosophila simulans]
gi|194204657|gb|EDX18233.1| GD17360 [Drosophila simulans]
Length = 841
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/478 (42%), Positives = 297/478 (62%), Gaps = 71/478 (14%)
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
R DG+ A++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+
Sbjct: 265 RTDGVRALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILI 324
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK-------- 574
TPGRL+DH HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+
Sbjct: 325 GTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECENKDL 384
Query: 575 PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD--------STDIH------------- 613
PQ Q +LLSATLT VQ+LAG+TL++P+ ID +D S D +
Sbjct: 385 PQLQRMLLSATLTSQVQQLAGLTLKDPLYIDNSDEAASAALKSKDGYQKETIEALLEVDD 444
Query: 614 -------NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED-EESKMLVFMA 665
+ T L I ++L+ ++V PP LRLVAL+S + + V+ ++ K +VFM+
Sbjct: 445 GLGEYQEDVTGVLSILENLQLSYVVVPPTLRLVALSSLL---AKEVDASPKQFKAIVFMS 501
Query: 666 TQDMADYHTELLSTVLG------------------------ENIAFFKLHGSMSQSERTE 701
T +M ++H ++L+ L + + FFKLHGSM+Q+ER
Sbjct: 502 TTEMVNFHHDMLNEALTRRVLDEDDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQG 561
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
VF+ FR S VL+ TDV RG+D+P + +VQYT P ++ D+VHRVGRTAR G +G ++
Sbjct: 562 VFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAV 621
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL PSE + V L+ +RIRI++ + LQ LL + D +R V+ AA+ LQ
Sbjct: 622 LFLAPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLP---KDDEAR----TVQEAASNLQHK 674
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
F++ + + LH +CK + SW++FY+++ K+L+ IFN + H+GHFAKSFAL++APS
Sbjct: 675 FQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKPIFNVRIAHMGHFAKSFALKEAPS 732
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 163/314 (51%), Gaps = 101/314 (32%)
Query: 54 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 113
R DG+ A++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+
Sbjct: 265 RTDGVRALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILI 324
Query: 114 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 173
TPGRL V+HL+
Sbjct: 325 GTPGRL--------------VDHLL----------------------------------- 335
Query: 174 SATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------- 226
HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+
Sbjct: 336 ------------HTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECENKD 383
Query: 227 -PQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAAD--------STDIH------------ 265
PQ Q +LLSATLT VQ+LAG+TL++P+ ID +D S D +
Sbjct: 384 LPQLQRMLLSATLTSQVQQLAGLTLKDPLYIDNSDEAASAALKSKDGYQKETIEALLEVD 443
Query: 266 --------NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED-EESKMLVFM 316
+ T L I ++L+ ++V PP LRLVAL+S + + V+ ++ K +VFM
Sbjct: 444 DGLGEYQEDVTGVLSILENLQLSYVVVPPTLRLVALSSLL---AKEVDASPKQFKAIVFM 500
Query: 317 ATQDMADYHTELLS 330
+T +M ++H ++L+
Sbjct: 501 STTEMVNFHHDMLN 514
>gi|300175953|emb|CBK21949.2| unnamed protein product [Blastocystis hominis]
Length = 574
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/486 (41%), Positives = 296/486 (60%), Gaps = 32/486 (6%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
N ++ T VQ +I I GGDV+++S TGSGKTL+Y IPI+Q+LQ KI R DG Y
Sbjct: 95 FNFSRPTVVQSQTIPIISQGGDVMIKSATGSGKTLSYLIPIVQRLQSFPTKIDRSDGAYV 154
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I++PTREL +Q E KL F WIVP+ + GG+K KSEK+RIRKG +I+++TPGRLL
Sbjct: 155 IILVPTRELCVQIEETLKKLLLPFFWIVPTVICGGQKRKSEKSRIRKGANIIISTPGRLL 214
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ-FQSILLSATLTP 588
DH HT +L +V+ LVLDEADR+LD G+E+ + + +L KQ Q Q++LLSATL+P
Sbjct: 215 DHALHTTSLSLQRVQMLVLDEADRLLDMGFEQQLRDLFSLLHKQITQPLQTLLLSATLSP 274
Query: 589 AVQRLAGMTLQNPIQIDAADSTD-----------IHNTTDSLVIPDSLKQHFIVTPPKLR 637
A+Q+LA ++L NP ID+ T+ + T + +P L+Q++I LR
Sbjct: 275 AIQQLAELSLHNPTFIDSDSLTNKQAFPSSSPNSANATEEKFKVPKQLRQYYIQIDASLR 334
Query: 638 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL--GENI-------AFF 688
L AL +FI + ++ N+ ++L+F+ T D +H EL + G+ I +
Sbjct: 335 LPALCAFIRKELRDENQ-RHCRILIFVNTCDSVAFHDELFRELSWPGDGIDTSIVKGSLV 393
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
LHG+M Q +R + + F +ICTDVAARGLD+P+VDW++QY P+ ++Y+HRV
Sbjct: 394 SLHGNMPQHQRLKNLRDFCKANFATMICTDVAARGLDIPVVDWVIQYDPPTEISEYIHRV 453
Query: 749 GRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIE----EIKLKDCLQNLLSVKMEGDLS 804
GRTAR G G SLLFL PSE+ +V LQN+ + + +I DC V+ G
Sbjct: 454 GRTARAGKSGQSLLFLQPSEMGMVFTLQNKGLNMRQFNFDIWFDDC------VRKSGPGH 507
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
+L AA+ +Q S +V + + L+ A G+ S+ R YA+YSK+L+ FN + +H
Sbjct: 508 KLVYAKRNHAASEIQASILRSVEESEGLNDLAVMGFMSYCRAYATYSKELKGAFNVRLLH 567
Query: 865 LGHFAK 870
GH AK
Sbjct: 568 FGHVAK 573
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 178/330 (53%), Gaps = 52/330 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
N ++ T VQ +I I GGDV+++S TGSGKTL+Y IPI+Q+LQ KI R DG Y
Sbjct: 95 FNFSRPTVVQSQTIPIISQGGDVMIKSATGSGKTLSYLIPIVQRLQSFPTKIDRSDGAYV 154
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTREL +Q E KL F WIVP+ + GG+K KSEK+RIRKG +I+++TPGRLL
Sbjct: 155 IILVPTRELCVQIEETLKKLLLPFFWIVPTVICGGQKRKSEKSRIRKGANIIISTPGRLL 214
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ-FQSILLSATLTP 179
DH HT +L +V+ LVLDEADR+LD G+E+ + + +L KQ Q Q++LLSATL+P
Sbjct: 215 DHALHTTSLSLQRVQMLVLDEADRLLDMGFEQQLRDLFSLLHKQITQPLQTLLLSATLSP 274
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A + +AE L P F
Sbjct: 275 AI-------------------------------QQLAE----LSLHNPTF---------- 289
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
+ +L N ++ + T + +P L+Q++I LRL AL +FI
Sbjct: 290 -----IDSDSLTNKQAFPSSSPNSANATEEKFKVPKQLRQYYIQIDASLRLPALCAFIRK 344
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
+ ++ N+ ++L+F+ T D +H EL
Sbjct: 345 ELRDENQ-RHCRILIFVNTCDSVAFHDELF 373
>gi|325186816|emb|CCA21361.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 715
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/504 (40%), Positives = 307/504 (60%), Gaps = 39/504 (7%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+G T VQ+LSI +L DVLV+S+TGSGKTLAY +PIIQ LQ +P+I R DG
Sbjct: 172 KGFAFKCPTRVQKLSILHVLQKKDVLVKSETGSGKTLAYLLPIIQILQSSQPRIHRIDGC 231
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II+PTREL LQ + L +SF +VP + GGE+ K+EKAR+RKGISIL+ATPGR
Sbjct: 232 VALIIVPTRELCLQIFDTLQLLLRSFVNLVPGVIVGGERKKAEKARLRKGISILIATPGR 291
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +T+ +++K++ LVLDEADR+LD G+ I + LE ++ + Q Q+IL+SAT+
Sbjct: 292 LLDHLTNTQAFQYAKLQFLVLDEADRLLDLGFGPQIGQILEKIRTKSAQTQNILVSATIN 351
Query: 588 PAVQRLAGMTLQNPIQIDAADST--DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
V+ LA ++LQ+P+ +DA +++ D + + + P LKQ+ I P K RL AL+ F+
Sbjct: 352 SNVKDLASLSLQDPVLVDADEASIGDQSHPSTAFATPQQLKQYAITVPAKSRLCALSCFL 411
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL------------------------ 681
+ + + ++ K++VF +T D D+H L ++ +
Sbjct: 412 --REELMRTEKSFKIVVFFSTCDAVDFHFTLFNSCVWPTKRIDHEAMKEIQSLTNESNDC 469
Query: 682 ----GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
G F+LHG+++Q ERT F+ F G+L CTDVAARG++LP V WIVQY
Sbjct: 470 SRFFGREGRLFRLHGNIAQQERTTTFRAFCKASCGILFCTDVAARGVNLPTVHWIVQYDP 529
Query: 738 PSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL-QNRRIRIEEIKLKDCLQNLLS 796
P+ + DYVHR+GRTAR G GSSLLFL+PSE + ++ L QN ++ + ++ L
Sbjct: 530 PTEARDYVHRIGRTARSGMCGSSLLFLLPSEPEYLQYLEQNGLPKLSALSMEK-----LI 584
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR- 855
++ G + + + ++ LQ FE V + L A + + S++R YA++S D R
Sbjct: 585 ARVSGKTYKHTTSSGQKLSSDLQFMFEQTVEKNSRLFHIASQAFHSFIRSYATHSADTRE 644
Query: 856 HIFNFKQIHLGHFAKSFALRDAPS 879
IF +++H GH A+SFALR+ P+
Sbjct: 645 RIFQVRKLHFGHIARSFALREPPA 668
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 127/171 (74%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ+LSI +L DVLV+S+TGSGKTLAY +PIIQ LQ +P+I R DG A+II+PT
Sbjct: 180 TRVQKLSILHVLQKKDVLVKSETGSGKTLAYLLPIIQILQSSQPRIHRIDGCVALIIVPT 239
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL LQ + L +SF +VP + GGE+ K+EKAR+RKGISIL+ATPGRLLDH +T
Sbjct: 240 RELCLQIFDTLQLLLRSFVNLVPGVIVGGERKKAEKARLRKGISILIATPGRLLDHLTNT 299
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
+ +++K++ LVLDEADR+LD G+ I + LE ++ + Q Q+IL+SAT+
Sbjct: 300 QAFQYAKLQFLVLDEADRLLDLGFGPQIGQILEKIRTKSAQTQNILVSATI 350
>gi|328871046|gb|EGG19418.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 880
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/662 (34%), Positives = 340/662 (51%), Gaps = 103/662 (15%)
Query: 369 PDIPNVPTRRLKPVSEALF-APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPIL 427
P +P+V ++ S+ +F A +++ + + M NL M ITQ T +Q SI +L
Sbjct: 175 PTLPSVEPKKSHIDSKEVFTAGSNFGDITSLSSRMTDNLINNMKITQPTLIQSSSISHVL 234
Query: 428 DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFT 487
G DV++++QTGSGKTLAY IPIIQ L +I+R++G YA++I PTRELA+Q ++
Sbjct: 235 QGRDVMMKAQTGSGKTLAYLIPIIQILSSYEKRITREEGAYAIVIAPTRELAIQIYQVLE 294
Query: 488 KLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLV 547
KL K F WI+P + GGE EK R+RKG+SI+VATPGR+LDH + T++ K ++ LV
Sbjct: 295 KLLKPFHWIIPGAIMGGESRDKEKKRLRKGVSIVVATPGRMLDHLRKTQSFKIARTRFLV 354
Query: 548 LDEADRILDQGYERDIAEFLEILKKQKPQF-----------------------------Q 578
LDEADR+LD G+E+DI +E+L + + Q
Sbjct: 355 LDEADRLLDLGFEKDITAIIELLNINRTKILKPATINTDTTVATTTTTTSIPTSPFVHRQ 414
Query: 579 SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDI------------------------HN 614
+IL+SATLT + RLA ++L P+ + S DI
Sbjct: 415 NILVSATLTEGINRLANLSLYKPVYVAVDKSQDIMVDDQADGDEMDEKQTLTVKEDGDKT 474
Query: 615 TTDSL------VIPDSLKQHFIVTPPKLRLVALASFILGKC-QNVNEDEESKMLVFMATQ 667
T D+L V P L Q+++ K RLVAL SF+ K Q+ SKM+VF ++
Sbjct: 475 TLDTLLKNSTLVAPKQLDQYYVEVEAKERLVALVSFMKWKTTQSQISTGNSKMIVFFSSC 534
Query: 668 DMADYHTELLSTVLGENIA------------------------FFKLHGSMSQSERTEVF 703
D+H L + EN FKLHG + Q RT+ F
Sbjct: 535 SSVDFHYHLFTNAKLENKKKKKDDQDQDDDDDEKEKVDLFDTPVFKLHGEIDQKHRTDTF 594
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F+ K G+L+ TDVAARGLDLP V+WI+QY S + DYVHR+GRTAR+GH GS+++F
Sbjct: 595 FKFQKAKKGILLTTDVAARGLDLPQVNWIIQYDPCSDTKDYVHRIGRTARIGHTGSAIIF 654
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN-VETAATALQMSF 822
L+P+E K V+ L I E+ + Q+L +G L + +E+ LQ+
Sbjct: 655 LLPTEKKYVQHLARLGIDPSEMNVTTIFQSLYH-STDGQLKKTKRSTQLESQVHDLQLIL 713
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E +L+ + A Y S +R Y+++ +L+++F+ +HLGH +KSFALR+ P+ ++
Sbjct: 714 ERLILEDEGARDLARLAYQSHLRAYSTHRAELKYVFHIGSLHLGHISKSFALRETPTELN 773
Query: 883 GIGKPKNKEE----------------LKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGLP 926
I + K+ +K+ K N KK+ E DSG
Sbjct: 774 KITSKQEKQHKKEEDAKKEKRSTDYRMKHYKQTDEFGNGLAASTNLKKKRTNDEIDSGET 833
Query: 927 QR 928
Q+
Sbjct: 834 QQ 835
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 187/364 (51%), Gaps = 63/364 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ITQ T +Q SI +L G DV++++QTGSGKTLAY IPIIQ L +I+R++G YA
Sbjct: 217 MKITQPTLIQSSSISHVLQGRDVMMKAQTGSGKTLAYLIPIIQILSSYEKRITREEGAYA 276
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+Q ++ KL K F WI+P + GGE EK R+RKG+SI+VATPGR+L
Sbjct: 277 IVIAPTRELAIQIYQVLEKLLKPFHWIIPGAIMGGESRDKEKKRLRKGVSIVVATPGRML 336
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH + T++ K ++ LVLDEADR+LD G+E+DI +E+L +I + L PA
Sbjct: 337 DHLRKTQSFKIARTRFLVLDEADRLLDLGFEKDITAIIELL--------NINRTKILKPA 388
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T T + R Q++L+SATLT
Sbjct: 389 TINTDTTVATTTTTTSIPTSPFVHR------------------------QNILVSATLTE 424
Query: 241 AVQRLAGMTLQNPIQIDAADSTDI------------------------HNTTD------S 270
+ RLA ++L P+ + S DI T D +
Sbjct: 425 GINRLANLSLYKPVYVAVDKSQDIMVDDQADGDEMDEKQTLTVKEDGDKTTLDTLLKNST 484
Query: 271 LVIPDSLKQHFIVTPPKLRLVALASFILGK-CQNVNEDEESKMLVFMATQDMADYHTELL 329
LV P L Q+++ K RLVAL SF+ K Q+ SKM+VF ++ D+H L
Sbjct: 485 LVAPKQLDQYYVEVEAKERLVALVSFMKWKTTQSQISTGNSKMIVFFSSCSSVDFHYHLF 544
Query: 330 STKK 333
+ K
Sbjct: 545 TNAK 548
>gi|226478754|emb|CAX72872.1| putative ATP-dependent RNA helicase DDX31 [Schistosoma japonicum]
Length = 723
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/563 (39%), Positives = 324/563 (57%), Gaps = 50/563 (8%)
Query: 369 PDIPNVPTRRLKPVSEALFAPTSYE---EFPGIHPFMKKNLNEGMNITQVTTVQQLSIQP 425
P + + ++ +KP E +F+ ++ E I P + L + +T +Q+ ++ P
Sbjct: 92 PFLDEIMSQPVKPKIEPVFSLKHWKDVCESLNIFPHLISCLINRFKMDYLTAIQEAALPP 151
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
++ G DVL+R+QTGSGKTLAYA+P+ +L ++ P + RKDG + +LP+RELA QT ++
Sbjct: 152 LVSGRDVLIRAQTGSGKTLAYAVPLFDRLIKLDPPVERKDGPLGIAVLPSRELATQTFDV 211
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
F L ++ IVP L GG K KS+KA +RKGI+IL+ TP R+LDH HT TL +++
Sbjct: 212 FKILSQACVRIVPGLLIGGMKRKSQKASVRKGINILIGTPKRILDHMGHTSTLNLQRIQW 271
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQF---------QSILLSATLTPAVQRLAGM 596
LV+DEADR+L+ G+E+D+ + L +Q F Q++LLSATL+P V+ LAGM
Sbjct: 272 LVIDEADRLLEMGFEQDVRHIIAGLMQQLNCFSENKSMSKIQTVLLSATLSPGVESLAGM 331
Query: 597 TLQNPIQIDAAD---STDIH----------------NTTDSLVIPDSLKQHFIVTPPKLR 637
TL++P++ + TD N +P LK ++ P KLR
Sbjct: 332 TLKSPVRCVVGEDNLGTDNAQLSIPKTSKAVFDSKVNNVAEFSLPSGLKHFLLIVPWKLR 391
Query: 638 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE------------NI 685
LV+L +F+L KC+ + K++VFMATQD D+H L +VL + N+
Sbjct: 392 LVSLTAFLLLKCK--YHENGGKLIVFMATQDCVDFHYHLFKSVLCDESDEVISNIPVTNL 449
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
+ ++LHGSM ER F +F + +GVLI TDVA+RGLDL V W+VQY DYV
Sbjct: 450 SIYRLHGSMEHIERESAFNSFSASHAGVLITTDVASRGLDLASVAWVVQYHVTGGPIDYV 509
Query: 746 HRVGRTARVGHEGSSLLFLIPSEVKLVEELQNR-RIRIEEIKLKDCLQNLL----SVKME 800
HRVGRTAR G G +LLFL P E++ L+++ I ++EI L D LQ +L + K
Sbjct: 510 HRVGRTARAGSHGKALLFLEPEELEFRNLLKSKVGIEMKEISLPDLLQTVLFHFQNTKHP 569
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
G VE + L F AV IL + + Y S++R YAS+S DLR IF F
Sbjct: 570 GKHRHNYYTTVEEGVSQLFKLFLEAVDNDDILTSLSELAYISFLRSYASFSGDLRPIFTF 629
Query: 861 KQIHLGHFAKSFALRDAPSVISG 883
K++HLGH A++F L+ PS ++
Sbjct: 630 KRLHLGHVARAFCLQKRPSDVAA 652
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 178/335 (53%), Gaps = 53/335 (15%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ ++ P++ G DVL+R+QTGSGKTLAYA+P+ +L ++ P + RKDG + +LP
Sbjct: 141 LTAIQEAALPPLVSGRDVLIRAQTGSGKTLAYAVPLFDRLIKLDPPVERKDGPLGIAVLP 200
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
+RELA QT ++F L ++ IVP L GG K KS+KA +RKGI+IL+ TP R+LDH H
Sbjct: 201 SRELATQTFDVFKILSQACVRIVPGLLIGGMKRKSQKASVRKGINILIGTPKRILDHMGH 260
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF---------QSILLSAT 176
T TL +++ LV+DEADR+L+ G+E+D+ + L +Q F Q++LLSAT
Sbjct: 261 TSTLNLQRIQWLVIDEADRLLEMGFEQDVRHIIAGLMQQLNCFSENKSMSKIQTVLLSAT 320
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
L+P + + V+ E + D L I K K F S +
Sbjct: 321 LSPGV---ESLAGMTLKSPVRCVVGEDNLGTDNAQ-------LSIPKTSKAVFDSKV--- 367
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
N +P LK ++ P KLRLV+L +F
Sbjct: 368 -----------------------------NNVAEFSLPSGLKHFLLIVPWKLRLVSLTAF 398
Query: 297 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+L KC+ + K++VFMATQD D+H L +
Sbjct: 399 LLLKCK--YHENGGKLIVFMATQDCVDFHYHLFKS 431
>gi|33340651|gb|AAQ14890.1|AF335569_1 helicain C [Homo sapiens]
Length = 758
Score = 371 bits (953), Expect = e-99, Method: Compositional matrix adjust.
Identities = 197/408 (48%), Positives = 263/408 (64%), Gaps = 36/408 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQ T+
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQNTS 605
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EEDQKMVVFFSSCELVEFHYSLF 530
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 842 SWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN 901
S+++ YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K +K +
Sbjct: 644 SFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL--- 700
Query: 902 KEKSFKQRGNFSKKQML-SEFDSGL 925
K + S ++L SE+ SG+
Sbjct: 701 ---HKKTQSKHSLAEILRSEYSSGM 722
>gi|358340107|dbj|GAA48069.1| ATP-dependent RNA helicase DDX31/DBP7 [Clonorchis sinensis]
Length = 635
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 237/592 (40%), Positives = 340/592 (57%), Gaps = 59/592 (9%)
Query: 378 RLKPV-SEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R++PV SE L+ P + + G+H F+ L + +T++T +Q+ +I +L+G D L+R+
Sbjct: 16 RIEPVFSEELWKP--FCDSLGVHSFITSCLVDRFKLTRLTAIQKEAIPHLLEGKDCLIRA 73
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+ +L + P ISR G A+IILPTRELA QT E+F L K+ I
Sbjct: 74 QTGSGKTLAYAVPLFHQLMSLEPPISRTHGTLALIILPTRELATQTFEVFQLLGKACVRI 133
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GG K KS+K + KG++IL+ TP R+LDH + L SK+ +LV+DEADR+L+
Sbjct: 134 VPGCLIGGMKRKSQKVSLSKGLNILIGTPQRILDHILRSVNLSLSKLLYLVIDEADRLLE 193
Query: 557 QGYERDIAEFLEILKK------QKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADST 610
G+E+ + ++ +++ + Q++LLSATLTP V++LAG+TL+ P++ T
Sbjct: 194 MGFEQSVRRIIDHIREVSNAVGKAQSLQTVLLSATLTPGVEKLAGLTLRQPVRC-VVRET 252
Query: 611 DIHNTTDS-------------LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 657
D H++ S V+P LK + +V P KLRL ALA+F+L KC+
Sbjct: 253 DAHSSGPSSPRVNGTCEAAGEFVMPTGLKHYILVVPWKLRLSALAAFLLLKCR--YHKGG 310
Query: 658 SKMLVFMATQDMADYHTELLSTVLGE------------NIAFFKLHGSMSQS-------- 697
K+++FMATQD D+H +L TVL N++ F+LHG M +
Sbjct: 311 GKLIIFMATQDSVDFHYQLFKTVLVSDDEEFAIPIEVANLSLFRLHGKMEHNLITKAIPA 370
Query: 698 ----ERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR 753
ER VF +F + KSG+L+ TDVA+RGLDL V W+VQY DYVHRVGRTAR
Sbjct: 371 TTFQERESVFHSFCTSKSGILLTTDVASRGLDLAGVAWVVQYQVTGGPVDYVHRVGRTAR 430
Query: 754 VGHEGSSLLFLIPSEVKLVEELQNRR-IRIEEIKLKDCLQNLL----SVKMEGDLSRLAD 808
G G +LLFL E+ + L+ R I EE+ L D +Q L +K G L +
Sbjct: 431 AGGRGKALLFLDNMELGFADLLRARAGIVFEELSLADLMQTALFHVRHMKRNG-LQLNSC 489
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
VE + F AV + +LH A YTS++R YAS+S +LR F FK++HLGH
Sbjct: 490 TTVEEGVSRFFGLFLDAVCEDPVLHPLAEVAYTSFLRSYASFSGELRTFFTFKRLHLGHV 549
Query: 869 AKSFAL----RDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
A++F L RD + +SG K ++ K K + IN+ KQ KK+
Sbjct: 550 ARAFCLQATPRDIAARVSGRFSSKFEKSKKEKNVKINEIGDRKQSAPTDKKR 601
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 181/337 (53%), Gaps = 57/337 (16%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+T++T +Q+ +I +L+G D L+R+QTGSGKTLAYA+P+ +L + P ISR G A
Sbjct: 47 FKLTRLTAIQKEAIPHLLEGKDCLIRAQTGSGKTLAYAVPLFHQLMSLEPPISRTHGTLA 106
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+IILPTRELA QT E+F L K+ IVP L GG K KS+K + KG++IL+ TP R+L
Sbjct: 107 LIILPTRELATQTFEVFQLLGKACVRIVPGCLIGGMKRKSQKVSLSKGLNILIGTPQRIL 166
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK------QKPQFQSILLS 174
DH + L SK+ +LV+DEADR+L+ G+E+ + ++ +++ + Q++LLS
Sbjct: 167 DHILRSVNLSLSKLLYLVIDEADRLLEMGFEQSVRRIIDHIREVSNAVGKAQSLQTVLLS 226
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
ATLTP K+ L L + R + + E D
Sbjct: 227 ATLTPGV-----------EKLAGLTLRQPVRCVVR--ETD-------------------- 253
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
+ + P+ R+ G V+P LK + +V P KLRL ALA
Sbjct: 254 AHSSGPSSPRVNGTC----------------EAAGEFVMPTGLKHYILVVPWKLRLSALA 297
Query: 295 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+F+L KC+ K+++FMATQD D+H +L T
Sbjct: 298 AFLLLKCR--YHKGGGKLIIFMATQDSVDFHYQLFKT 332
>gi|426363392|ref|XP_004048824.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 2
[Gorilla gorilla gorilla]
Length = 778
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 264/408 (64%), Gaps = 36/408 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTTD----------------SLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N D S IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELGSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQ T+
Sbjct: 558 LHGGMEQQERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQNTS 605
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D S IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LGSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 842 SWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN 901
S+++ YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K +K +
Sbjct: 644 SFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL--- 700
Query: 902 KEKSFKQRGNFSKKQML-SEFDSGL 925
K + S ++L SE+ SG+
Sbjct: 701 ---HKKTQSKHSLAEILRSEYSSGM 722
>gi|291225101|ref|XP_002732540.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 31-like
[Saccoglossus kowalevskii]
Length = 431
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/403 (49%), Positives = 272/403 (67%), Gaps = 24/403 (5%)
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GGEK KSEKARIRKGI+ILVATPGRL+DH +HTE+LK S+V+ +VLDEADR+LD G+E+D
Sbjct: 2 GGEKKKSEKARIRKGINILVATPGRLVDHLEHTESLKLSRVKWVVLDEADRLLDLGFEKD 61
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPI------QIDAADSTDIHNTT 616
IA L L + + QS+LLSATL+ AV+ LA M+L++P+ ++ A + D+ +T
Sbjct: 62 IAAILNKLNLESGERQSVLLSATLSEAVKSLACMSLKDPVYVNIQGDVNTASNKDVTSTM 121
Query: 617 DSLV---IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYH 673
+ + P L+Q+FI+ P KLRLV LA+FI+ KC+ +E SKM++F++++D ++H
Sbjct: 122 EQSIDVSTPKQLRQYFIIVPSKLRLVTLAAFIISKCKLASE---SKMIIFLSSKDSVEFH 178
Query: 674 TELLSTVLGENIA------FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLP 727
LL VL + F+LHGSM Q ER +V+ F +GVL+CTDVAARGLDLP
Sbjct: 179 YSLLINVLNDEDNDDDDLEIFQLHGSMPQEERRKVYLHFVECTTGVLLCTDVAARGLDLP 238
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
V WIVQY P ++ +Y+HRVGRTAR+G +G +LLFL PSEV+ V+ L + ++ ++EI +
Sbjct: 239 EVKWIVQYNTPGTAAEYIHRVGRTARIGKKGQALLFLAPSEVEYVQVLGSHKLSLQEIDM 298
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
L++LL KM G + R VE +ATALQ FE V Q A Y S+ R Y
Sbjct: 299 NGVLKHLLLYKM-GRMKR----TVEESATALQRDFEEWVNQDIKFQKLARSAYQSFTRAY 353
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNK 890
A+Y + +HIF+ K++HLGH AKSFALR+AP I G PK K
Sbjct: 354 ATYPSEFKHIFHIKRLHLGHVAKSFALREAPQAI-GNTLPKRK 395
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 106/154 (68%), Gaps = 12/154 (7%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+HTE+LK S+V+ +VLDEADR+LD G+E+DIA L L + + QSVLLSATL+ AV+
Sbjct: 32 EHTESLKLSRVKWVVLDEADRLLDLGFEKDIAAILNKLNLESGERQSVLLSATLSEAVKS 91
Query: 245 LAGMTLQNPI------QIDAADSTDIHNTTDSLV---IPDSLKQHFIVTPPKLRLVALAS 295
LA M+L++P+ ++ A + D+ +T + + P L+Q+FI+ P KLRLV LA+
Sbjct: 92 LACMSLKDPVYVNIQGDVNTASNKDVTSTMEQSIDVSTPKQLRQYFIIVPSKLRLVTLAA 151
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
FI+ KC+ + ESKM++F++++D ++H LL
Sbjct: 152 FIISKCKLAS---ESKMIIFLSSKDSVEFHYSLL 182
>gi|114627328|ref|XP_001168509.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 2 [Pan
troglodytes]
Length = 778
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 264/408 (64%), Gaps = 36/408 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQ T+
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQNTS 605
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 193/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 842 SWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN 901
S+++ YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K +K +
Sbjct: 644 SFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL--- 700
Query: 902 KEKSFKQRGNFSKKQML-SEFDSGL 925
K + S ++L SE+ SG+
Sbjct: 701 ---HKKTQSKHSLAEILRSEYSSGM 722
>gi|332255427|ref|XP_003276833.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 2
[Nomascus leucogenys]
Length = 778
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/408 (48%), Positives = 264/408 (64%), Gaps = 36/408 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SL+QH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLEQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASTRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
LHGSM Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQ T+
Sbjct: 558 LHGSMEQEERTAVFQEFSRSRRGVLLCTDVAARGLDLPQVTWIVQNTS 605
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LDSFAIPESLEQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 842 SWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN 901
S+++ YA+Y ++L+HIF+ + +HLGH AKSF LRDAP +S + + K K LK +
Sbjct: 644 SFIQAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPRNLSALTRRKRKAHLKRPDL--- 700
Query: 902 KEKSFKQRGNFSKKQML-SEFDSGL 925
K + S ++L SE+ SG+
Sbjct: 701 ---HKKTQSKHSLAEILRSEYSSGM 722
>gi|291001093|ref|XP_002683113.1| predicted protein [Naegleria gruberi]
gi|284096742|gb|EFC50369.1| predicted protein [Naegleria gruberi]
Length = 577
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 212/579 (36%), Positives = 319/579 (55%), Gaps = 80/579 (13%)
Query: 371 IPNVPTRRLKPVSEA----------------LFAPTSYEEFPG-IHPFMKKNLNEGMNIT 413
+ +P RR K +E+ LF P F + P + L M I
Sbjct: 11 VSQIPARRTKTPNESIVQDGKEEFSAVINNDLFCPEPLSSFSTQLSPIVISTLTNQMGIE 70
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDGIYAVI 471
++T +Q ++ PIL +VL++S+TGSGKTLAY IP+I+ L Q + KISR DG +A+I
Sbjct: 71 RLTKIQTRALSPILGKSNVLMKSETGSGKTLAYLIPLIEMLYRQSLEKKISRDDGTFAII 130
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTREL +Q ++ K+ S ++V + GGEK KSEK R+RKG++ILVATPGRL DH
Sbjct: 131 LAPTRELCVQVDKVLKKITSSLNFMVCGGIMGGEKRKSEKERLRKGVNILVATPGRLEDH 190
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ--------------- 576
+ T++ K KV++L+LDEAD +LD G+E + ++L ++K Q
Sbjct: 191 LRSTQSFKCDKVKYLILDEADILLDFGFEERVKNIYQMLIQRKLQNPLISQNQTEKTLSE 250
Query: 577 -FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS----------------- 618
Q +L+SATL +Q LA QID ++ I + +D
Sbjct: 251 SIQKVLVSATLHSKIQTLAQ-------QIDVVNALYIGHGSDGEFIEKVFNLITDKLPSN 303
Query: 619 -LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN-EDEESKMLVFMATQDMADYHTEL 676
IP L Q+ I+ PP+ RLV LA F+ K + + E E K++VF++ D ++H
Sbjct: 304 IFTIPAHLTQYAIIVPPQFRLVMLAGFLRSKTMSESLEQEPGKIIVFLSCCDSVEFHYNF 363
Query: 677 LSTVLGE----------NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
+ ++ FKLHG + Q ERT +FK F K GVL CTDVAARGLDL
Sbjct: 364 FKYFQSKFKFIKEVPLIHVPLFKLHGDIEQKERTNIFKQFSDAKEGVLFCTDVAARGLDL 423
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
P V WIVQY P + +Y+HR+GRTAR+G +G +++FL P E + L+ ++ I EIK
Sbjct: 424 PCVKWIVQYDPPGNPKEYLHRIGRTARMGVKGHAVMFLHPHEELYKKLLEKYKLTIHEIK 483
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL----QQKILHTSACKGYTS 842
+ CL++++ R + + AA LQ FE ++ + L++ A Y S
Sbjct: 484 GETCLESIIL-----SFRRKSMRDPIEAAAWLQNIFEQELVNSGKENTELYSLAVNAYFS 538
Query: 843 WVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
++++Y+++ D+++IF+ +HLGH AKSFAL+D+PS I
Sbjct: 539 YIKYYSTHGGDVKYIFHLNNLHLGHLAKSFALKDSPSKI 577
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/362 (34%), Positives = 189/362 (52%), Gaps = 74/362 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDGI 58
M I ++T +Q ++ PIL +VL++S+TGSGKTLAY IP+I+ L Q + KISR DG
Sbjct: 67 MGIERLTKIQTRALSPILGKSNVLMKSETGSGKTLAYLIPLIEMLYRQSLEKKISRDDGT 126
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+A+I+ PTREL +Q ++ K+ S ++V + GGEK KSEK R+RKG++ILVATPGR
Sbjct: 127 FAIILAPTRELCVQVDKVLKKITSSLNFMVCGGIMGGEKRKSEKERLRKGVNILVATPGR 186
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L DH + T++ K KV++L+LDEAD +LD G+E + ++L ++K Q+ L+S T
Sbjct: 187 LEDHLRSTQSFKCDKVKYLILDEADILLDFGFEERVKNIYQMLIQRK--LQNPLISQNQT 244
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
E+ ++E Q VL+SATL
Sbjct: 245 ---------------------------------EKTLSE----------SIQKVLVSATL 261
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS------------------LVIPDSLKQH 280
+Q LA QID ++ I + +D IP L Q+
Sbjct: 262 HSKIQTLAQ-------QIDVVNALYIGHGSDGEFIEKVFNLITDKLPSNIFTIPAHLTQY 314
Query: 281 FIVTPPKLRLVALASFILGKCQNVN-EDEESKMLVFMATQDMADYHTELLST-KKKIKKL 338
I+ PP+ RLV LA F+ K + + E E K++VF++ D ++H + K K +
Sbjct: 315 AIIVPPQFRLVMLAGFLRSKTMSESLEQEPGKIIVFLSCCDSVEFHYNFFKYFQSKFKFI 374
Query: 339 KE 340
KE
Sbjct: 375 KE 376
>gi|350416310|ref|XP_003490908.1| PREDICTED: probable ATP-dependent RNA helicase CG8611-like [Bombus
impatiens]
Length = 987
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/390 (49%), Positives = 256/390 (65%), Gaps = 47/390 (12%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+ + +PI IDAA D + + LV+P S+ Q +IV
Sbjct: 605 QTILLSATLTQAVEKLAGLAMDHPIFIDAAKENLETTGGDTNELNEDLVVPQSVNQSYIV 664
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------- 683
TPPKLR+V L+++I GKCQ+ + K+L+FMATQDM DYHTE+LS+VL +
Sbjct: 665 TPPKLRMVTLSAYIAGKCQSHGQ---HKILIFMATQDMVDYHTEILSSVLTKPIDEDDDD 721
Query: 684 -----NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
++ FFKLHGSM+Q ERTEVFKTFR KSGVL+CTDVAARGLDLP VD ++QYT P
Sbjct: 722 SDPLVDVEFFKLHGSMTQKERTEVFKTFRQAKSGVLLCTDVAARGLDLPKVDCVIQYTGP 781
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+S+ DYVHR+GRTAR G GS+ +FL P E++ V L++RRIRI + + D L NLL+
Sbjct: 782 TSARDYVHRIGRTARAGSSGSATIFLTPPEIEFVRMLESRRIRIRQEIMDDILDNLLT-- 839
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
LS+ + +V AA LQ FE+ VL+ L ACK YTSW+RFY+SY +D+R IF
Sbjct: 840 ---PLSKHS--SVHNAAIGLQNEFETMVLENTKLRERACKAYTSWIRFYSSYPRDMREIF 894
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIG---------KPKNKEELKNKKMAINKEKSFKQR 909
+ + HLGH+AKSFALR+ P I GIG K ++ L N+K+ K K++
Sbjct: 895 DRRTAHLGHYAKSFALRETPQRIGGIGKRLHEKDSSKQQHNNRLANEKLDGEPAKKQKRQ 954
Query: 910 GNFSKKQML--------SEFDSGL-PQRKP 930
G+ K +L SE+DSGL P +KP
Sbjct: 955 GDEPKMGLLKRVRMLNTSEYDSGLEPVKKP 984
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 164/217 (75%), Gaps = 1/217 (0%)
Query: 359 GPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTV 418
G ISSLF +NPDIPN+ R +KP++E +FA T++ + IHPFM NL + M+IT++T V
Sbjct: 265 GKISSLFGHNPDIPNIGQRLVKPINEPIFAGTTFTDLK-IHPFMISNLEQNMHITKMTIV 323
Query: 419 QQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 478
QQ +I I G D+LVRSQTGSGKTLAYA+PI++ L ++RPK+SR G+ A+I++PTREL
Sbjct: 324 QQKAIPQIFSGKDILVRSQTGSGKTLAYALPIVECLHKIRPKLSRNSGLKALIVVPTREL 383
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETL 538
ALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLLDH K T L
Sbjct: 384 ALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLLDHIKRTTAL 443
Query: 539 KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 575
K S V++ VLDEADR+ D GYE+DI+ + LK P
Sbjct: 444 KLSDVKYFVLDEADRMFDMGYEKDISGIVSALKVSLP 480
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 128/166 (77%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+IT++T VQQ +I I G D+LVRSQTGSGKTLAYA+PI++ L ++RPK+SR G+ A
Sbjct: 315 MHITKMTIVQQKAIPQIFSGKDILVRSQTGSGKTLAYALPIVECLHKIRPKLSRNSGLKA 374
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLL
Sbjct: 375 LIVVPTRELALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLL 434
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 166
DH K T LK S V++ VLDEADR+ D GYE+DI+ + LK P
Sbjct: 435 DHIKRTTALKLSDVKYFVLDEADRMFDMGYEKDISGIVSALKVSLP 480
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 78/108 (72%), Gaps = 9/108 (8%)
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 283
Q++LLSATLT AV++LAG+ + +PI IDAA D + + LV+P S+ Q +IV
Sbjct: 605 QTILLSATLTQAVEKLAGLAMDHPIFIDAAKENLETTGGDTNELNEDLVVPQSVNQSYIV 664
Query: 284 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
TPPKLR+V L+++I GKCQ+ + K+L+FMATQDM DYHTE+LS+
Sbjct: 665 TPPKLRMVTLSAYIAGKCQSHG---QHKILIFMATQDMVDYHTEILSS 709
>gi|340711417|ref|XP_003394272.1| PREDICTED: probable ATP-dependent RNA helicase CG8611-like [Bombus
terrestris]
Length = 993
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 192/390 (49%), Positives = 255/390 (65%), Gaps = 47/390 (12%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+ + +P+ IDAA D + + LV+P S+ Q +IV
Sbjct: 611 QTILLSATLTQAVEKLAGLAMDHPVFIDAAKENLETTGGDANELNEDLVVPQSVNQSYIV 670
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA----- 686
TPPKLR+V L+++I GKCQ + K+L+FMATQDM DYH E+LS+VL ++I
Sbjct: 671 TPPKLRMVTLSAYIAGKCQTHGQ---HKILIFMATQDMVDYHMEILSSVLTKSIDEDDDD 727
Query: 687 --------FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
FFKLHGSM+Q ERTEVFKTFR KSGVL+CTDVAARGLDLP VD ++QYT P
Sbjct: 728 SDPLVDVEFFKLHGSMTQKERTEVFKTFRQAKSGVLLCTDVAARGLDLPKVDCVIQYTGP 787
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+S+ DYVHR+GRTAR G GS+ +FL P E++ V L++RRIRI + + D L NLL+
Sbjct: 788 TSARDYVHRIGRTARAGSSGSATIFLTPPEIEFVRMLESRRIRIRQEIMDDILNNLLT-- 845
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
LS+ + +V AA LQ FE+ VL+ L ACK YTSW+RFY+SY +D+R IF
Sbjct: 846 ---PLSKHS--SVHNAAIGLQNEFETMVLEDTKLRERACKAYTSWIRFYSSYPRDMREIF 900
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIGKP---------KNKEELKNKKMAINKEKSFKQR 909
+ + +HLGH+AKSFALR+ P I GIGK ++ L N+K+ K K++
Sbjct: 901 DRRTVHLGHYAKSFALRETPQRIGGIGKKLHEKDSSKQQHNNRLTNEKLDGEPAKKQKRQ 960
Query: 910 GNFSKKQML--------SEFDSGL-PQRKP 930
G+ K +L SE+DSGL P +KP
Sbjct: 961 GDEPKMGLLKRVRMLNTSEYDSGLEPVKKP 990
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 162/213 (76%), Gaps = 1/213 (0%)
Query: 359 GPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTV 418
G ISSLF +NPDIPN+ R +KP++E +F T++ + IHPFM NL + M+IT++T V
Sbjct: 265 GKISSLFGHNPDIPNIGQRLVKPINEPIFTGTTFTDLK-IHPFMISNLEQNMHITKMTIV 323
Query: 419 QQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 478
QQ +I I G D+LVRSQTGSGKTLAYA+PI++ L ++RPK+SR G+ A+I++PTREL
Sbjct: 324 QQKAIPQIFSGKDILVRSQTGSGKTLAYALPIVECLHKIRPKLSRNSGLKALIVVPTREL 383
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETL 538
ALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLLDH K T L
Sbjct: 384 ALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLLDHIKRTTAL 443
Query: 539 KFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
K S V++ VLDEADR+ D GYE+DI+ + LK
Sbjct: 444 KLSDVKYFVLDEADRMFDMGYEKDISGIVSALK 476
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/162 (62%), Positives = 127/162 (78%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+IT++T VQQ +I I G D+LVRSQTGSGKTLAYA+PI++ L ++RPK+SR G+ A
Sbjct: 315 MHITKMTIVQQKAIPQIFSGKDILVRSQTGSGKTLAYALPIVECLHKIRPKLSRNSGLKA 374
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLL
Sbjct: 375 LIVVPTRELALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLL 434
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 162
DH K T LK S V++ VLDEADR+ D GYE+DI+ + LK
Sbjct: 435 DHIKRTTALKLSDVKYFVLDEADRMFDMGYEKDISGIVSALK 476
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 9/108 (8%)
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 283
Q++LLSATLT AV++LAG+ + +P+ IDAA D + + LV+P S+ Q +IV
Sbjct: 611 QTILLSATLTQAVEKLAGLAMDHPVFIDAAKENLETTGGDANELNEDLVVPQSVNQSYIV 670
Query: 284 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
TPPKLR+V L+++I GKCQ + K+L+FMATQDM DYH E+LS+
Sbjct: 671 TPPKLRMVTLSAYIAGKCQTHG---QHKILIFMATQDMVDYHMEILSS 715
>gi|297824007|ref|XP_002879886.1| hypothetical protein ARALYDRAFT_483128 [Arabidopsis lyrata subsp.
lyrata]
gi|297325725|gb|EFH56145.1| hypothetical protein ARALYDRAFT_483128 [Arabidopsis lyrata subsp.
lyrata]
Length = 609
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 220/571 (38%), Positives = 316/571 (55%), Gaps = 69/571 (12%)
Query: 385 ALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
LFA S+ G+ P + L E M T VQ +I IL G DVLV + TG+GKT+
Sbjct: 24 GLFASCSFSSL-GLDPKLSDQLQERMGFEAPTLVQAQAIPVILSGRDVLVNAATGTGKTI 82
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
AY P+I LQ PK+ R G +A++I+PTREL LQ E KL F WIVP ++ GG
Sbjct: 83 AYLAPLIHHLQGYSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGG 142
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
EK EKAR+RKGISIL+ATPGRLLDH K+T + + ++ DEAD IL+ GY ++I
Sbjct: 143 EKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIE 202
Query: 565 EFLEILKKQKP-------------QFQSILLSATLTPAVQRLAGMTLQNPIQI------- 604
+ +++L + Q Q++LLSATL V LA ++L +P+ I
Sbjct: 203 QIIKLLGSGQYEEGETDDIVPKGIQKQNLLLSATLNEKVNDLAKLSLDDPVMIGLDNSKL 262
Query: 605 --------------DAAD-----STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
DA D + ++ +++ IP L Q ++ P RLVAL S +
Sbjct: 263 QQNLSIESPASPDSDADDMVIHVNKSVNPSSEDYGIPSQLVQKYVRVPCGARLVALLSVL 322
Query: 646 LGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTV---------------LGENIAFFK 689
+N+ E E S K++VF +T+D D+H LL+ L F+
Sbjct: 323 ----KNLFEREASQKVVVFFSTRDAVDFHYSLLTEFQWPPNSETEEEATKQLFLKCKTFR 378
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHGSM Q +R F TF++ K +L+ TDVAARGLD P V I+QY P +T+YVHRVG
Sbjct: 379 LHGSMEQEDRRSAFGTFKTEKQALLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVG 438
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
RTAR+G +G +LLFL P E+ ++EL+ + E L L+ L + G++ R+
Sbjct: 439 RTARIGEKGEALLFLQPIEIDYLKELKKHGASLTEYPL---LKVLDKFPIPGNMPRIKKV 495
Query: 810 -NVETA--ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
++E+ +LQ + ES + + + A + SWVR YA++ +L+ IF K++HLG
Sbjct: 496 ISLESHPWVISLQRALESFNYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLG 555
Query: 867 HFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
H AKSFALR+ PS+ +GK +KE +K K+
Sbjct: 556 HVAKSFALREQPSL---VGKSHHKETMKRKR 583
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 180/357 (50%), Gaps = 79/357 (22%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ +I IL G DVLV + TG+GKT+AY P+I LQ PK+ R G +A
Sbjct: 48 MGFEAPTLVQAQAIPVILSGRDVLVNAATGTGKTIAYLAPLIHHLQGYSPKVDRSHGTFA 107
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL LQ E KL F WIVP ++ GGEK EKAR+RKGISIL+ATPGRLL
Sbjct: 108 LVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLL 167
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K+T + + ++ DEAD IL+ GY ++I + +++L Q++
Sbjct: 168 DHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSG--QYEE---------- 215
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
E D I+ +G ++ Q++LLSATL
Sbjct: 216 --------------------GETDDIVPKGIQK----------------QNLLLSATLNE 239
Query: 241 AVQRLAGMTLQNPIQI---------------------DAAD-----STDIHNTTDSLVIP 274
V LA ++L +P+ I DA D + ++ +++ IP
Sbjct: 240 KVNDLAKLSLDDPVMIGLDNSKLQQNLSIESPASPDSDADDMVIHVNKSVNPSSEDYGIP 299
Query: 275 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
L Q ++ P RLVAL S + +N+ E E S K++VF +T+D D+H LL+
Sbjct: 300 SQLVQKYVRVPCGARLVALLSVL----KNLFEREASQKVVVFFSTRDAVDFHYSLLT 352
>gi|255571988|ref|XP_002526935.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533687|gb|EEF35422.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 603
Score = 361 bits (927), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 222/587 (37%), Positives = 314/587 (53%), Gaps = 66/587 (11%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+FA S+ G+HP + L E M TTVQ +I +L G VLV + TG+GKT+A
Sbjct: 27 MFASCSFLNL-GLHPTLCDQLRERMGFEAPTTVQAQAIPVVLSGRHVLVNAATGTGKTVA 85
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y PII LQ P+I R G +A++++PTREL LQ EI L F WIVP ++ GGE
Sbjct: 86 YLAPIIHHLQSYSPRIERAHGTFALVLVPTRELCLQVYEILQGLLHRFHWIVPGYIMGGE 145
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
EKAR+RKGISILVATPGRLLDH K+T + + + ++ DEADRIL+ G+ ++I +
Sbjct: 146 SRSKEKARLRKGISILVATPGRLLDHLKNTSSFSHTNLRWIIFDEADRILELGFGKEIED 205
Query: 566 FLEILKKQ---------------KPQFQSILLSATLTPAVQRLAGMTLQNPIQI------ 604
L++L + Q Q++LLSATL V LA ++L+NP+ I
Sbjct: 206 ILDLLGSRLTRSVGKGNRDSSISNYQRQNLLLSATLNEKVNHLANISLENPVMIGLDDEK 265
Query: 605 ---------------DAAD-----STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
DA D S + +T +P L Q ++ P RL L S
Sbjct: 266 MQPEPLLEHTKSLKSDADDELEHPSKVLKPSTGDFKVPVQLVQKYVKVPCGSRLATLLSI 325
Query: 645 ILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS------TVLGENIAF--------FK 689
+ +++ E S K++VF +T D D+H LLS T E A F+
Sbjct: 326 L----KHLFEKRASQKIVVFFSTCDAVDFHYSLLSEFRFSCTSQSEAEAAEMFLRCKTFR 381
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG+M Q +R + F+ F+S K +L+ TDVAARGLDLP V WI+QY P +T+YVHRVG
Sbjct: 382 LHGNMKQEDRRDTFQAFKSDKLALLLSTDVAARGLDLPKVTWIIQYDTPGEATEYVHRVG 441
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
RTAR+G +G SLLFL P EV ++ELQ + + E + L + + +
Sbjct: 442 RTARMGEKGDSLLFLQPVEVDYLQELQKHGVSLTEYPILKMLDSFSFYEQMHRNKKFVSL 501
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
+LQ + ES + Q ++ A + SWVR Y ++ +L+ IF +++HLGH A
Sbjct: 502 ESHPWLLSLQKALESFIAAQPKMNKLAQNAFLSWVRAYTAHRGELKRIFMVQKLHLGHVA 561
Query: 870 KSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
KSFAL+ PSV +GK K+ K K+ K K +R + K+
Sbjct: 562 KSFALKQQPSV---VGKAFQKQSKKRKRE--QKPKGLSKRRKITNKR 603
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 177/346 (51%), Gaps = 55/346 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M TTVQ +I +L G VLV + TG+GKT+AY PII LQ P+I R G +A
Sbjct: 50 MGFEAPTTVQAQAIPVVLSGRHVLVNAATGTGKTVAYLAPIIHHLQSYSPRIERAHGTFA 109
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ EI L F WIVP ++ GGE EKAR+RKGISILVATPGRLL
Sbjct: 110 LVLVPTRELCLQVYEILQGLLHRFHWIVPGYIMGGESRSKEKARLRKGISILVATPGRLL 169
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ---------------K 165
DH K+T + + + ++ DEADRIL+ G+ ++I + L++L +
Sbjct: 170 DHLKNTSSFSHTNLRWIIFDEADRILELGFGKEIEDILDLLGSRLTRSVGKGNRDSSISN 229
Query: 166 PQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 225
Q Q++LLSATL KV HL + + G L +
Sbjct: 230 YQRQNLLLSATLN--------------EKVNHLANISLENPVMIG-----------LDDE 264
Query: 226 KPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTP 285
K Q + +L T +++ A L++P ++ + +T +P L Q ++ P
Sbjct: 265 KMQPEPLL---EHTKSLKSDADDELEHPSKV-------LKPSTGDFKVPVQLVQKYVKVP 314
Query: 286 PKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
RL L S + +++ E S K++VF +T D D+H LLS
Sbjct: 315 CGSRLATLLSIL----KHLFEKRASQKIVVFFSTCDAVDFHYSLLS 356
>gi|297738524|emb|CBI27769.3| unnamed protein product [Vitis vinifera]
Length = 584
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 312/575 (54%), Gaps = 60/575 (10%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+FA S+ G+HP + L E M T VQ +I IL G VLV + TG+GKT+A
Sbjct: 26 IFASCSFSSL-GLHPTLCDQLRERMGFEVPTIVQAEAIPVILAGRHVLVNAATGTGKTIA 84
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y P+I L + P+I R G +A++++PTREL +Q EI KL F WIVP ++ GGE
Sbjct: 85 YLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHRFHWIVPGYVMGGE 144
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
EKAR+RKGISILVATPGRLLDH K+T + + + ++ DEADRIL+ G+ ++I E
Sbjct: 145 NRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHTNLRWIIFDEADRILELGFGKEIEE 204
Query: 566 FLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA------------------- 606
L++L+ Q+ Q++LLSATL V LA ++L+NP+ I
Sbjct: 205 ILDLLEFQR---QNLLLSATLNEKVNHLAQISLENPVTIGLDGKKMQPKPPLEHFGSVEF 261
Query: 607 ---ADSTDIHN----TTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES- 658
DS +H + +P L Q ++ P RLV L S + +++ E E S
Sbjct: 262 DVDEDSEKLHKIISPSNGDYKLPAQLVQRYVKVPCGSRLVVLLSIL----KHLFEREASQ 317
Query: 659 KMLVFMATQDMADYHTELLSTVLGE--------------NIAFFKLHGSMSQSERTEVFK 704
K++VF +T D D+H L S L F+LHG+M +R F+
Sbjct: 318 KIVVFFSTCDAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTFQLHGNMKHEDRRTTFQ 377
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
TF+ KS +L+ TDVAARGLD P V I+QY +P +++YVHRVGRTAR+G G SLLFL
Sbjct: 378 TFKKEKSALLLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRTARLGERGDSLLFL 437
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
P E+ +++L+ + + E L L + + + + + + LQ + ES
Sbjct: 438 QPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLSGQKHHIKKFISLEMHPWSLYLQKALES 497
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI 884
+ + + A + SWVR Y ++ +L+ IF K++HLGH AKSFAL+D PS++
Sbjct: 498 FIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRIFQVKKLHLGHVAKSFALKDQPSLVG-- 555
Query: 885 GKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLS 919
K+ +M K K +++ SK++ L+
Sbjct: 556 ---------KSMQMQTKKRKRDQKQQGLSKRKKLA 581
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 175/337 (51%), Gaps = 53/337 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ +I IL G VLV + TG+GKT+AY P+I L + P+I R G +A
Sbjct: 49 MGFEVPTIVQAEAIPVILAGRHVLVNAATGTGKTIAYLAPVINHLHKYDPRIERSAGTFA 108
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL +Q EI KL F WIVP ++ GGE EKAR+RKGISILVATPGRLL
Sbjct: 109 LVLVPTRELCMQVYEILQKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K+T + + + ++ DEADRIL+ G+ ++I E L++L+ Q+ Q++LLSATL
Sbjct: 169 DHLKNTSSFLHTNLRWIIFDEADRILELGFGKEIEEILDLLEFQR---QNLLLSATLN-- 223
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
KV HL + + G + KK +P+ P
Sbjct: 224 ------------EKVNHLAQISLENPVTIGLDG---------KKMQPK-----------P 251
Query: 241 AVQRLAGMTLQNPIQIDA-ADSTDIHN----TTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
++ ++ D DS +H + +P L Q ++ P RLV L S
Sbjct: 252 PLEHFGS------VEFDVDEDSEKLHKIISPSNGDYKLPAQLVQRYVKVPCGSRLVVLLS 305
Query: 296 FILGKCQNVNEDEES-KMLVFMATQDMADYHTELLST 331
+ +++ E E S K++VF +T D D+H L S
Sbjct: 306 IL----KHLFEREASQKIVVFFSTCDAVDFHYSLFSA 338
>gi|345483582|ref|XP_001601543.2| PREDICTED: probable ATP-dependent RNA helicase CG8611-like [Nasonia
vitripennis]
Length = 961
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/405 (48%), Positives = 254/405 (62%), Gaps = 62/405 (15%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+T+ NP +DAA ++ D LV+P+S+ Q +IV
Sbjct: 564 QTILLSATLTQAVEKLAGLTMHNPAFVDAAKENVEAVGGNLSEINDDLVVPESVSQSYIV 623
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------- 683
TPPKLR+V L+++I G+CQ K+LVFMATQDM DYH E+LSTVL +
Sbjct: 624 TPPKLRMVTLSAYIAGRCQ---AQGSHKILVFMATQDMIDYHAEVLSTVLNKPVDEEDED 680
Query: 684 -----NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
++ FFKLHGSM+Q ERT++FKTFR+ KSGVL+CTDVAARGLDLP VD +VQYT P
Sbjct: 681 SEPLVDVEFFKLHGSMTQKERTDIFKTFRAAKSGVLLCTDVAARGLDLPKVDTVVQYTGP 740
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+S+ DYVHR+GRTAR G G S +FL P EV+ L+ RRIRI++ + D L LL
Sbjct: 741 TSTRDYVHRIGRTARAGTSGVSTIFLTPPEVEFARMLEKRRIRIKQEDMDDVLAKLL--- 797
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
G LS +V AA ALQ FE+ VL+ K L+T+ACK YTSWVRFY+SY +++R +F
Sbjct: 798 --GPLS--PHNSVHAAAIALQNDFENLVLENKKLYTAACKAYTSWVRFYSSYPREMREVF 853
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIG------------KPKNKEELKNKK-----MAIN 901
N K +HLGH+AKSFALR+ P I G KPK++ L N++ N
Sbjct: 854 NRKDLHLGHYAKSFALREPPQKIGAAGKSIREREQSQLAKPKHQNRLSNQRNDGVPAGNN 913
Query: 902 KEK-------SFKQRGNFSKKQML--------SEFDSGL-PQRKP 930
K + QR + ML SE+DSGL P +KP
Sbjct: 914 KRRAGQAGAGGASQRQQDRRTGMLKNVRMLNTSEYDSGLEPIKKP 958
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/363 (48%), Positives = 231/363 (63%), Gaps = 35/363 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M IT +TTVQ+ +I IL G DVLVRSQTGSGKTLAYA+PII+ LQ +RPK++R GI A
Sbjct: 309 MKITTMTTVQKKAIPVILSGKDVLVRSQTGSGKTLAYALPIIETLQRVRPKLARDSGIKA 368
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG ++LVATPGRLL
Sbjct: 369 LVVVPTRELALQTYECFLKLVKPFTWIVPGYLVGGEKRKAEKARLRKGCTVLVATPGRLL 428
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSI------LLS 174
DH KHT+ L+ + VLDEADR+LD GYE+DI+ + L+ P + +L
Sbjct: 429 DHIKHTQALRLDLINCFVLDEADRMLDMGYEKDISGIVAALENNLPASDNSGYDPMQMLR 488
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADR----ILDQGYERDIAEFLE---ILKKQKP 227
+ P +E + ++E D +D I Q Y D E + LKK +P
Sbjct: 489 QRVNPEAADQNKSEEKEGKRIESNEEDNSDEERKIITKQQYNSDSEEEPDDEADLKKSEP 548
Query: 228 -------------QFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTT 268
+ Q++LLSATLT AV++LAG+T+ NP +DAA ++
Sbjct: 549 ASSNIEENDDRPHKRQTILLSATLTQAVEKLAGLTMHNPAFVDAAKENVEAVGGNLSEIN 608
Query: 269 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 328
D LV+P+S+ Q +IVTPPKLR+V L+++I G+CQ K+LVFMATQDM DYH E+
Sbjct: 609 DDLVVPESVSQSYIVTPPKLRMVTLSAYIAGRCQ---AQGSHKILVFMATQDMIDYHAEV 665
Query: 329 LST 331
LST
Sbjct: 666 LST 668
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/245 (53%), Positives = 173/245 (70%), Gaps = 1/245 (0%)
Query: 331 TKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPT 390
++ K+ K + N + + + SG ISSLF +NP IPN+ R +KPV+E +F+
Sbjct: 231 SRDKVDKFNKNNGEKKEMNERPRPQQGSGKISSLFGHNPTIPNIGQRFVKPVNEKVFSAE 290
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
+ + GIH + +NL + M IT +TTVQ+ +I IL G DVLVRSQTGSGKTLAYA+PI
Sbjct: 291 KFGDL-GIHAYAVQNLEQNMKITTMTTVQKKAIPVILSGKDVLVRSQTGSGKTLAYALPI 349
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
I+ LQ +RPK++R GI A++++PTRELALQT E F KL K FTWIVP +L GGEK K+E
Sbjct: 350 IETLQRVRPKLARDSGIKALVVVPTRELALQTYECFLKLVKPFTWIVPGYLVGGEKRKAE 409
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
KAR+RKG ++LVATPGRLLDH KHT+ L+ + VLDEADR+LD GYE+DI+ + L
Sbjct: 410 KARLRKGCTVLVATPGRLLDHIKHTQALRLDLINCFVLDEADRMLDMGYEKDISGIVAAL 469
Query: 571 KKQKP 575
+ P
Sbjct: 470 ENNLP 474
>gi|15226735|ref|NP_181602.1| DEAD-box ATP-dependent RNA helicase 17 [Arabidopsis thaliana]
gi|75327220|sp|Q7XJN0.1|RH17_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 17
gi|330254771|gb|AEC09865.1| DEAD-box ATP-dependent RNA helicase 17 [Arabidopsis thaliana]
Length = 609
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 312/571 (54%), Gaps = 69/571 (12%)
Query: 385 ALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
LFA S+ G+ + L E M T VQ +I IL G DVLV + TG+GKT+
Sbjct: 24 GLFASCSFSSL-GLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTI 82
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
AY P+I LQ PK+ R G +A++I+PTREL LQ E KL F WIVP ++ GG
Sbjct: 83 AYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGG 142
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
EK EKAR+RKGISIL+ATPGRLLDH K+T + + ++ DEAD IL+ GY ++I
Sbjct: 143 EKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIE 202
Query: 565 EFLEILKKQKP-------------QFQSILLSATLTPAVQRLAGMTLQNPIQID------ 605
+ +++L + Q Q++LLSATL V LA ++L +P+ I
Sbjct: 203 QIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKL 262
Query: 606 ---------AADSTDIHNT-----------TDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
AA +D + ++ IP L Q ++ P RLVAL S +
Sbjct: 263 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 322
Query: 646 LGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVL----------GENIAF-----FK 689
+N+ E E S K++VF +T+D D+H LLS G F F+
Sbjct: 323 ----KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFR 378
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHGSM Q +R F TF++ K VL+ TDVAARGLD P V I+QY P +T+YVHRVG
Sbjct: 379 LHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVG 438
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
RTAR+G +G +LLFL P E+ ++EL+ + E L L + G++ R+
Sbjct: 439 RTARIGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKF---PIPGNMPRIKKV 495
Query: 810 -NVETA--ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
++E+ +LQ + ES + + + A + SWVR YA++ +L+ IF K++HLG
Sbjct: 496 LSLESHPWVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLG 555
Query: 867 HFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
H AKSFALR+ PS+ +GK +KE +K K+
Sbjct: 556 HVAKSFALREQPSL---VGKSHHKETMKRKR 583
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 176/357 (49%), Gaps = 79/357 (22%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ +I IL G DVLV + TG+GKT+AY P+I LQ PK+ R G +A
Sbjct: 48 MGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFA 107
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL LQ E KL F WIVP ++ GGEK EKAR+RKGISIL+ATPGRLL
Sbjct: 108 LVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLL 167
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K+T + + ++ DEAD IL+ GY ++I + +++L + +
Sbjct: 168 DHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNE------------- 214
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
QG E DI + Q Q++LLSATL
Sbjct: 215 ----------------------------QGEEDDIV-------PKGIQKQNLLLSATLND 239
Query: 241 AVQRLAGMTLQNPIQID---------------AADSTDIHNT-----------TDSLVIP 274
V LA ++L +P+ I AA +D + ++ IP
Sbjct: 240 KVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIP 299
Query: 275 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
L Q ++ P RLVAL S + +N+ E E S K++VF +T+D D+H LLS
Sbjct: 300 SQLVQRYLRVPCGARLVALLSVL----KNLFEREASQKVVVFFSTRDAVDFHYSLLS 352
>gi|302820816|ref|XP_002992074.1| hypothetical protein SELMODRAFT_134680 [Selaginella moellendorffii]
gi|300140196|gb|EFJ06923.1| hypothetical protein SELMODRAFT_134680 [Selaginella moellendorffii]
Length = 552
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 318/551 (57%), Gaps = 33/551 (5%)
Query: 382 VSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSG 441
+ +A+F + + G+ P + +L+ M T VQ+ +I +L G D+LV ++TG+G
Sbjct: 4 MKDAVFGSGEFGDL-GLEPRLAAHLHGAMGFQSPTVVQKSAIPLLLSGRDLLVNARTGTG 62
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
KTL Y PI+ LQ PKI+R +G +AVI++PTREL +Q + +L F W+VP +
Sbjct: 63 KTLVYLAPIVHGLQAREPKITRTEGTFAVILVPTRELCIQVCGVAEQLVHRFHWLVPGHI 122
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
GGE EKAR+RKGI+IL+ATPGRLLDH K+T + ++ ++ +V DEADR+LD G+E+
Sbjct: 123 MGGENRAKEKARLRKGITILIATPGRLLDHLKNTASFQYDFLQWIVFDEADRLLDMGFEK 182
Query: 562 DIAEFLEIL---KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQI-------DAADSTD 611
DI L+ L ++ + Q +LLSATL V +LA ++L +P I + A D
Sbjct: 183 DIRSILDFLGTHQRNGSKRQHVLLSATLNDRVNKLAKISLCDPATIGLSSTPPEGAPDLD 242
Query: 612 IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMA 670
N I D L+Q + K+RLV L + + +N + S K++VF +T D
Sbjct: 243 T-NANIEYSISDKLQQCVLKVSSKIRLVTLLALLR---LKLNSTKGSYKIVVFFSTCDAV 298
Query: 671 DYHTELL----------STVLGE--NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTD 718
D+H ++ S++ G + FKLHG++ Q ERT+ F F + +L+CTD
Sbjct: 299 DFHHTVMSRFSWVMDDGSSMRGRFLDCDIFKLHGNVEQRERTDTFHKFSQAERALLLCTD 358
Query: 719 VAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNR 778
VAARGLD + +IVQY P DYVHRVGRTAR+G +G + LFL P E + V+EL+
Sbjct: 359 VAARGLDFKGLSFIVQYDPPGEPVDYVHRVGRTARLGRKGEATLFLQPCEAEYVQELRKH 418
Query: 779 RIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACK 838
+ ++++ + L ++ ++ + + + + AA A+Q + ES V + L A
Sbjct: 419 GVVLKDLDTRKVLDSIYTISQKRSFASVEVAEMHPAAAAMQTALESFVTSEGDLKQLAVN 478
Query: 839 GYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKM 898
+ S VR YA + + LR IF + +HLGH AKSFALRDAPS +S K + +K+M
Sbjct: 479 AFRSSVRAYAVHREGLRKIFQVRMLHLGHVAKSFALRDAPSGLS-----KCSAQKASKRM 533
Query: 899 AINKEKSFKQR 909
K+++ K+R
Sbjct: 534 RAEKKRAGKKR 544
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ+ +I +L G D+LV ++TG+GKTL Y PI+ LQ PKI+R +G +A
Sbjct: 31 MGFQSPTVVQKSAIPLLLSGRDLLVNARTGTGKTLVYLAPIVHGLQAREPKITRTEGTFA 90
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VI++PTREL +Q + +L F W+VP + GGE EKAR+RKGI+IL+ATPGRLL
Sbjct: 91 VILVPTRELCIQVCGVAEQLVHRFHWLVPGHIMGGENRAKEKARLRKGITILIATPGRLL 150
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL---KKQKPQFQSILLSATL 177
DH K+T + ++ ++ +V DEADR+LD G+E+DI L+ L ++ + Q +LLSATL
Sbjct: 151 DHLKNTASFQYDFLQWIVFDEADRLLDMGFEKDIRSILDFLGTHQRNGSKRQHVLLSATL 210
Query: 178 T 178
Sbjct: 211 N 211
>gi|384251152|gb|EIE24630.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 593
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 211/532 (39%), Positives = 301/532 (56%), Gaps = 52/532 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+N T +QQ +I +L G D LV + TGSGKTLAY I+ LQ P++SR +G +A
Sbjct: 52 INFVTPTRIQQAAIPVLLRGRDALVNAPTGSGKTLAYLAAIVNDLQAQEPRVSRAEGTHA 111
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I++PTREL LQ ++ T + + + W+V + GGE EKAR+RKG+++LVATPGRLL
Sbjct: 112 LIVVPTRELCLQIADVLTLILRRYIWLVGGAIYGGENRAKEKARLRKGVTVLVATPGRLL 171
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDI--------AEFLEILKKQKPQF---- 577
DH ++T++ + ++ LVLDEADR+LD G+E+ I + L I K+ +
Sbjct: 172 DHLQNTQSFRTEELRWLVLDEADRLLDLGFEQKIGKAPCDGAGDILAITDKRTAEAGNRR 231
Query: 578 -QSILLSATLTPAVQRLAGMTLQNPIQI-----------------------DAADSTDIH 613
Q++LLSATL + LA ++LQNP I +AA S+
Sbjct: 232 RQTVLLSATLHSKLDSLASLSLQNPAAIGFQVQAVEGHLHITSAEGQDDGGNAAASSAHT 291
Query: 614 NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYH 673
+ IP LKQ + P K+RLV LA+ + C +K+++FM++ D ++
Sbjct: 292 ADREQFHIPTLLKQRVVEVPSKMRLVVLAALLRQICA---AQRAAKVVLFMSSCDAVEFV 348
Query: 674 TELLSTVL----GENI---AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
++ S V GE + FKLHG+++Q RT F F KSGVLICTDVAARGLD
Sbjct: 349 HQMFSEVFELVDGEPLLPTTIFKLHGNLAQGVRTHTFLEFSRCKSGVLICTDVAARGLDF 408
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
P V I+QY P +++YVHRVGRTAR+G G + LFL+P E + +L+ +R++ I
Sbjct: 409 PEVTSIIQYDPPGEASEYVHRVGRTARMGKVGEAFLFLLPCERGYLAKLEATGVRLQPIN 468
Query: 787 LKDCLQNLLSVK-MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR 845
L L L + +G R D T A ALQ AV L + A + S VR
Sbjct: 469 LLAALDLLPGAQGQQGRPGRTLD--THTGAHALQARLGEAVSADPGLRSLAADAFRSSVR 526
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
YA++ L+ +F+ K++HLGH A SFALR+APS+ +GK NK ELK KK
Sbjct: 527 AYAAHPAALKDVFHVKRLHLGHVAHSFALREAPSM---LGKSSNKAELKRKK 575
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 176/348 (50%), Gaps = 64/348 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N T +QQ +I +L G D LV + TGSGKTLAY I+ LQ P++SR +G +A
Sbjct: 52 INFVTPTRIQQAAIPVLLRGRDALVNAPTGSGKTLAYLAAIVNDLQAQEPRVSRAEGTHA 111
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTREL LQ ++ T + + + W+V + GGE EKAR+RKG+++LVATPGRLL
Sbjct: 112 LIVVPTRELCLQIADVLTLILRRYIWLVGGAIYGGENRAKEKARLRKGVTVLVATPGRLL 171
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDI--------AEFLEILKKQKPQF---- 168
DH ++T++ + ++ LVLDEADR+LD G+E+ I + L I K+ +
Sbjct: 172 DHLQNTQSFRTEELRWLVLDEADRLLDLGFEQKIGKAPCDGAGDILAITDKRTAEAGNRR 231
Query: 169 -QSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 227
Q++LLSATL H LD L L Q P
Sbjct: 232 RQTVLLSATL-------------------HSKLDS----------------LASLSLQNP 256
Query: 228 -----QFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 282
Q Q+V +T A + G +AA S+ + IP LKQ +
Sbjct: 257 AAIGFQVQAVEGHLHITSAEGQDDGG--------NAAASSAHTADREQFHIPTLLKQRVV 308
Query: 283 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
P K+RLV LA+ + C +K+++FM++ D ++ ++ S
Sbjct: 309 EVPSKMRLVVLAALLRQICA---AQRAAKVVLFMSSCDAVEFVHQMFS 353
>gi|313247392|emb|CBY15643.1| unnamed protein product [Oikopleura dioica]
Length = 705
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 218/525 (41%), Positives = 305/525 (58%), Gaps = 30/525 (5%)
Query: 364 LFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSI 423
LF N + +P +R E LF E IHP + NL + T VQQ S+
Sbjct: 147 LFDENAEEIELPAQRTVH-REDLFNNVVGFESLKIHPHLVGNLTTIFKLESPTLVQQKSV 205
Query: 424 QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTL 483
IL+G D L+RSQTGSGKTLAY +PI KL + + RK G+ AVII+PTREL QT
Sbjct: 206 PQILEGSDTLIRSQTGSGKTLAYMLPIFDKLMKTE-NLDRKSGVLAVIIVPTRELVGQTY 264
Query: 484 EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLK-FSK 542
+ +L ++ T IV LTGG+ SEKAR+RKG IL++TPGRL+DH + T LK
Sbjct: 265 KAAVQLTRACTKIVACELTGGQNRNSEKARLRKGSHILISTPGRLIDHLEKTGCLKKMPA 324
Query: 543 VEHLVLDEADRILDQGYERDIAEFLEILKKQK---PQFQSILLSATLTPAVQRLAGMTLQ 599
++ L+LDEADR+L+ GY I + +L ++K + Q+ILLSATL+ V+ LAG+ L
Sbjct: 325 LQMLILDEADRMLEMGYMDKIKHVMMLLNERKLEETKLQNILLSATLSENVESLAGLALS 384
Query: 600 NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESK 659
+P +I ++T+ + IP++LK +V PPKLRL+ LAS IL E+ K
Sbjct: 385 DPKRIVLDENTE---GNEKFAIPNTLKMRVVVIPPKLRLICLASAIL---------EKKK 432
Query: 660 MLVFMATQDMADYHTELLSTVLGE----NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
LVF+ T ++ E+ S LG + +LHG+M Q ER E F + VLI
Sbjct: 433 TLVFVNTMAEVNFLFEIFSK-LGYPRKMKMQTHRLHGNMEQKERVENMNAFLKAEKAVLI 491
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL 775
TDVA+RGLDLP V+ IVQ++ P S+ +YV RVGRTAR G G SLLFL+PSEV + +
Sbjct: 492 ATDVASRGLDLPNVETIVQFSPPGSAREYVQRVGRTARKGDAGQSLLFLLPSEVGFLSAV 551
Query: 776 QNRRI-RIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
+ ++ ++D L+ + K R ++ + A A Q E + Q L
Sbjct: 552 AAVGAGQWDQSDVEDVLKVVFHNK------RNSEQQMREEAAAFQNEIEEYITQNDSLRE 605
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
A +GY S++R YA+Y +L+ IF+ K++HLGH AKSF +RD P+
Sbjct: 606 LAIEGYCSFIRSYAAYPSELKPIFHIKKLHLGHIAKSFGIRDKPT 650
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 167/336 (49%), Gaps = 76/336 (22%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQQ S+ IL+G D L+RSQTGSGKTLAY +PI KL + + RK G+ AVII+PT
Sbjct: 198 TLVQQKSVPQILEGSDTLIRSQTGSGKTLAYMLPIFDKLMKTE-NLDRKSGVLAVIIVPT 256
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL QT + +L ++ T IV LTGG+ SEKAR+RKG
Sbjct: 257 RELVGQTYKAAVQLTRACTKIVACELTGGQNRNSEKARLRKG------------------ 298
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKH 186
H+++ R++D L C K
Sbjct: 299 --------SHILISTPGRLIDH----------------------------LEKTGCLKK- 321
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK---PQFQSVLLSATLTPAVQ 243
++ L+LDEADR+L+ GY I + +L ++K + Q++LLSATL+ V+
Sbjct: 322 -----MPALQMLILDEADRMLEMGYMDKIKHVMMLLNERKLEETKLQNILLSATLSENVE 376
Query: 244 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LAG+ L +P +I ++T+ + IP++LK +V PPKLRL+ LAS IL
Sbjct: 377 SLAGLALSDPKRIVLDENTE---GNEKFAIPNTLKMRVVVIPPKLRLICLASAIL----- 428
Query: 304 VNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLK 339
E+ K LVF+ T ++ E+ S +K+K
Sbjct: 429 ----EKKKTLVFVNTMAEVNFLFEIFSKLGYPRKMK 460
>gi|332030451|gb|EGI70139.1| Putative ATP-dependent RNA helicase [Acromyrmex echinatior]
Length = 704
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 189/391 (48%), Positives = 254/391 (64%), Gaps = 48/391 (12%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+T+ +PI +DAA DI + L++P S+ Q ++V
Sbjct: 322 QTILLSATLTQAVEKLAGLTMHDPIFVDAAKENLEVSGGDISAINEDLIVPQSVIQSYVV 381
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------- 683
TPPKLR+V L+++I G+CQ + K+L+FMATQDM DYH E+LS++L +
Sbjct: 382 TPPKLRMVTLSAYIAGRCQTPGQ---HKILIFMATQDMVDYHIEILSSILTKPIDDDDED 438
Query: 684 -----NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
++ FFKLHG+M+Q ERTEVFKTF KSGVL+CTDVAARGLD+P VD +VQYT P
Sbjct: 439 SDPLVDVEFFKLHGNMTQKERTEVFKTFSQAKSGVLLCTDVAARGLDMPKVDCVVQYTGP 498
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
S+ DYVHR+GRTAR G G++ +FL PSE++ V L++RRIRI++ + D L LL
Sbjct: 499 ISARDYVHRIGRTARAGCSGTATIFLTPSEIEFVRMLESRRIRIKQQDMNDVLDKLL--- 555
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
G LS+ +V+ AA ALQ FE VL+ + L ACK Y SW+RFY+SY +D+R +F
Sbjct: 556 --GPLSK--HNSVQAAAVALQNDFEDLVLENRQLGAKACKAYVSWMRFYSSYPRDMREMF 611
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIG---------KPKNKEELKNK-------KMAINK 902
N K +HLGH+AKSFALRD P I GIG KP++ L +K K
Sbjct: 612 NRKALHLGHYAKSFALRDPPQRIGGIGKKLHEKEISKPRHNNRLSSKPSDGVPQKKQRTG 671
Query: 903 EKSFKQRGNFSKKQML--SEFDSGL-PQRKP 930
+ K+ G + +ML SE+DSGL P +KP
Sbjct: 672 DGDEKRAGLLKRVRMLNTSEYDSGLEPPKKP 702
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQ 420
+SSLF NNPDIP + R +KPV+E +F ++ + IHP+M NL + M IT++TTVQQ
Sbjct: 1 MSSLFGNNPDIPTIGQRFVKPVNEPVFTEITFADL-NIHPYMISNLKQNMGITKMTTVQQ 59
Query: 421 LSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELAL 480
+I I DVL+RSQTGSGKTLAYA+PI++ L ++RP+++R G+ A++++PTRELAL
Sbjct: 60 KAIPQIFSNKDVLIRSQTGSGKTLAYALPIVELLHKIRPELNRNSGLLALVVVPTRELAL 119
Query: 481 QTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKF 540
QT E F KL K FTWIVP ++ GGEK K+EKAR+RKG +IL++TPGRLLDH KHT+ L+
Sbjct: 120 QTYECFIKLIKPFTWIVPGYIIGGEKRKAEKARLRKGCNILISTPGRLLDHIKHTKALRL 179
Query: 541 SKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+ V + VLDEADR+LD GYE DI+ + LK
Sbjct: 180 NDVRYFVLDEADRMLDMGYEMDISRIVSALK 210
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 128/162 (79%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M IT++TTVQQ +I I DVL+RSQTGSGKTLAYA+PI++ L ++RP+++R G+ A
Sbjct: 49 MGITKMTTVQQKAIPQIFSNKDVLIRSQTGSGKTLAYALPIVELLHKIRPELNRNSGLLA 108
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQT E F KL K FTWIVP ++ GGEK K+EKAR+RKG +IL++TPGRLL
Sbjct: 109 LVVVPTRELALQTYECFIKLIKPFTWIVPGYIIGGEKRKAEKARLRKGCNILISTPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 162
DH KHT+ L+ + V + VLDEADR+LD GYE DI+ + LK
Sbjct: 169 DHIKHTKALRLNDVRYFVLDEADRMLDMGYEMDISRIVSALK 210
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 77/108 (71%), Gaps = 9/108 (8%)
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 283
Q++LLSATLT AV++LAG+T+ +PI +DAA DI + L++P S+ Q ++V
Sbjct: 322 QTILLSATLTQAVEKLAGLTMHDPIFVDAAKENLEVSGGDISAINEDLIVPQSVIQSYVV 381
Query: 284 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
TPPKLR+V L+++I G+CQ + K+L+FMATQDM DYH E+LS+
Sbjct: 382 TPPKLRMVTLSAYIAGRCQTPG---QHKILIFMATQDMVDYHIEILSS 426
>gi|302761342|ref|XP_002964093.1| hypothetical protein SELMODRAFT_62176 [Selaginella moellendorffii]
gi|300167822|gb|EFJ34426.1| hypothetical protein SELMODRAFT_62176 [Selaginella moellendorffii]
Length = 538
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/535 (38%), Positives = 310/535 (57%), Gaps = 30/535 (5%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
G+ P + +L+ M T VQ+ +I +L G D+LV ++TG+GKTL Y PI+ LQ
Sbjct: 11 GLEPRLAAHLHGAMGFQSPTVVQKSAIPLLLSGRDLLVNARTGTGKTLVYLAPIVHGLQA 70
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
PKI+R +G +AVI++PTREL +Q + +L F W+VP + GGE EKAR+RK
Sbjct: 71 REPKITRTEGTFAVILVPTRELCIQVCGVAEQLVHRFHWLVPGHIMGGENRAKEKARLRK 130
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL---KKQ 573
GI+IL+ATPGRLLDH K+T + ++ ++ +V DEADR+LD G+E+DI L+ L ++
Sbjct: 131 GITILIATPGRLLDHLKNTASFQYDFLQWIVFDEADRLLDMGFEKDIRSILDFLGTHQRN 190
Query: 574 KPQFQSILLSATLTPAVQRLAGMTLQNPIQI-------DAADSTDIHNTTDSLVIPDSLK 626
+ Q +LLSATL V +LA ++L +P I + A D N I D L+
Sbjct: 191 GSKRQHVLLSATLNDRVNKLAKISLCDPATIGLSSTPPEGAPDLDT-NANIEYSISDKLQ 249
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL--------- 677
Q + K+RLV L + + + + + K++VF +T D D+H ++
Sbjct: 250 QCVLKVSSKIRLVTLLALL--RLKLYSTKGSYKIVVFFSTCDAVDFHHTVMSRFSWVMDD 307
Query: 678 -STVLGE--NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQ 734
S++ G + FKLHG++ Q ERT+ F F + +L+CTDVAARGLD + +IVQ
Sbjct: 308 GSSMRGRFLDCDIFKLHGNVEQRERTDTFHKFSQAERALLLCTDVAARGLDFKGLSFIVQ 367
Query: 735 YTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL 794
Y P DYVHRVGRTAR+G +G + LFL P E + V+EL+ + ++++ + L ++
Sbjct: 368 YDPPGEPVDYVHRVGRTARLGRKGEAALFLQPCEAEYVQELRKHGVVLKDLDTRKVLDSI 427
Query: 795 LSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDL 854
++ + + + + AA A+Q + ES V + L A + S VR YA + + L
Sbjct: 428 YTISQKRSFASVDVAEMHPAAAAMQTALESFVTSEGDLKQLAVNAFRSSVRAYAVHREGL 487
Query: 855 RHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQR 909
R IF + +HLGH AKSFALRDAPS +S K + +K+M K+++ K+R
Sbjct: 488 RKIFQVRMLHLGHVAKSFALRDAPSGLS-----KCSAQKASKRMRAEKKRAGKKR 537
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ+ +I +L G D+LV ++TG+GKTL Y PI+ LQ PKI+R +G +A
Sbjct: 24 MGFQSPTVVQKSAIPLLLSGRDLLVNARTGTGKTLVYLAPIVHGLQAREPKITRTEGTFA 83
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VI++PTREL +Q + +L F W+VP + GGE EKAR+RKGI+IL+ATPGRLL
Sbjct: 84 VILVPTRELCIQVCGVAEQLVHRFHWLVPGHIMGGENRAKEKARLRKGITILIATPGRLL 143
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL---KKQKPQFQSILLSATL 177
DH K+T + ++ ++ +V DEADR+LD G+E+DI L+ L ++ + Q +LLSATL
Sbjct: 144 DHLKNTASFQYDFLQWIVFDEADRLLDMGFEKDIRSILDFLGTHQRNGSKRQHVLLSATL 203
Query: 178 T 178
Sbjct: 204 N 204
>gi|440793050|gb|ELR14249.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1036
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 222/644 (34%), Positives = 341/644 (52%), Gaps = 134/644 (20%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+F+ S+ E G+ + ++ E MN+ + T +Q+ ++ +L G DVL++++TGSGKTLA
Sbjct: 378 IFSADSFAEM-GLVDRLVTHMKEKMNLDKPTHIQRAAVPHLLAGKDVLIKAETGSGKTLA 436
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y +PI+ LQ + K+ R DG YA+++ PTREL+LQ ++ KL +S+ WIVP + GGE
Sbjct: 437 YLLPIVHMLQALPNKVQRTDGAYAIVVAPTRELSLQIYDVLHKLVQSYPWIVPGLVMGGE 496
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
K KSEKAR+RKG++I+VATPGRLLDH ++T K +++LV+DEADR+LD G+ERD+ +
Sbjct: 497 KKKSEKARLRKGVTIVVATPGRLLDHLQNTAAFKVDNLKYLVMDEADRLLDMGFERDVTQ 556
Query: 566 FLEILKKQ------------------------------------KPQFQSILLSATLTPA 589
++ L ++ KP+ Q+ L+SATL
Sbjct: 557 IVKTLDEKVREKAELAALAAEATAPEGSKPKPKKAAADKAEEAAKPRRQTALISATLNSE 616
Query: 590 VQRLAGMTLQN-PI------------------------QIDAA----------------D 608
++RL G +++ P+ ++AA +
Sbjct: 617 IKRLMGTVMRSEPVYVSVTKVREQAAAAQPSTAPSKTSDVNAASAPSSAPVVATATKDKE 676
Query: 609 STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
I D++ P L Q + V P K RLV LA+F+ + + ++ K++VF ++
Sbjct: 677 EVSIDQKDDAISTPRGLDQSYAVVPCKKRLVTLAAFLQWQAKT---KKDCKLIVFTSSIA 733
Query: 669 MADYHTELLSTVL-------GEN------------------------------IAFFKLH 691
+++ L L G+N I FKLH
Sbjct: 734 SVEFYYTLFGRTLLPDYAKGGKNGPQHPQAGDDDDDDNKQSPDYRTRSQPLLSIPLFKLH 793
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G + Q +RT+V+ F + G+L CTDV ARGLDLP V+WIVQY P+ ST+Y+HRVGRT
Sbjct: 794 GDLPQVDRTKVYFAFCKAERGILFCTDVVARGLDLPAVNWIVQYDPPAESTEYIHRVGRT 853
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNR-RIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH G +L+FL+P+E + LQ + ++ + ++ L+ L + + D +
Sbjct: 854 ARLGHSGRALIFLLPTEEPYADHLQTQYQLALHKVSTASILKTLPAPPTKTD-------D 906
Query: 811 VETAATALQMSFESAVLQQK--ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
E AT LQ FE + + LH A Y S+VR YA++S +HIF+ K +HLGH
Sbjct: 907 FE-GATLLQTHFEWMLKHDREGDLHGLAASAYGSFVRAYATHSAATKHIFHIKNLHLGHV 965
Query: 869 AKSFALRDAPSVISGIGKPKNKEELKN-KKMAINKEK-SFKQRG 910
AKSFAL + PS + G K K+ LK+ K+A +K K S K +G
Sbjct: 966 AKSFALAEPPSKLYG---KKGKKALKDASKVAGDKRKDSRKGKG 1006
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 187/346 (54%), Gaps = 19/346 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN+ + T +Q+ ++ +L G DVL++++TGSGKTLAY +PI+ LQ + K+ R DG YA
Sbjct: 401 MNLDKPTHIQRAAVPHLLAGKDVLIKAETGSGKTLAYLLPIVHMLQALPNKVQRTDGAYA 460
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTREL+LQ ++ KL +S+ WIVP + GGEK KSEKAR+RKG++I+VATPGRLL
Sbjct: 461 IVVAPTRELSLQIYDVLHKLVQSYPWIVPGLVMGGEKKKSEKARLRKGVTIVVATPGRLL 520
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKPQFQSILLSATLT 178
DH ++T K +++LV+DEADR+LD G+ERD+ + ++ L K ++ + L +
Sbjct: 521 DHLQNTAAFKVDNLKYLVMDEADRLLDMGFERDVTQIVKTLDEKVREKAELAALAAEATA 580
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
P K + E ++ +I + + + +P + SV
Sbjct: 581 PEGSKPKPKKAAADKAEEAAKPRRQTALISATLNSEIKRLMGTVMRSEPVYVSVTKVREQ 640
Query: 239 TPAVQRLAGMTLQNPIQIDAADST--------------DIHNTTDSLVIPDSLKQHFIVT 284
A Q + + + +A S+ I D++ P L Q + V
Sbjct: 641 AAAAQPSTAPSKTSDVNAASAPSSAPVVATATKDKEEVSIDQKDDAISTPRGLDQSYAVV 700
Query: 285 PPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
P K RLV LA+F+ + + ++ K++VF ++ +++ L
Sbjct: 701 PCKKRLVTLAAFLQWQAKT---KKDCKLIVFTSSIASVEFYYTLFG 743
>gi|225444645|ref|XP_002277600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Vitis
vinifera]
Length = 600
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/588 (36%), Positives = 312/588 (53%), Gaps = 70/588 (11%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+FA S+ G+HP + L E M T VQ +I IL G VLV + TG+GKT+A
Sbjct: 26 IFASCSFSSL-GLHPTLCDQLRERMGFEVPTIVQAEAIPVILAGRHVLVNAATGTGKTIA 84
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y P+I L + P+I R G +A++++PTREL +Q EI KL F WIVP ++ GGE
Sbjct: 85 YLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHRFHWIVPGYVMGGE 144
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
EKAR+RKGISILVATPGRLLDH K+T + + + ++ DEADRIL+ G+ ++I E
Sbjct: 145 NRSKEKARLRKGISILVATPGRLLDHLKNTSSFLHTNLRWIIFDEADRILELGFGKEIEE 204
Query: 566 FLEIL--KKQKP-----------QFQSILLSATLTPAVQRLAGMTLQNPIQIDA------ 606
L++L + P Q Q++LLSATL V LA ++L+NP+ I
Sbjct: 205 ILDLLGSRTNGPTIREDAVTSEFQRQNLLLSATLNEKVNHLAQISLENPVTIGLDGKKMQ 264
Query: 607 ----------------ADSTDIHN----TTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
DS +H + +P L Q ++ P RLV L S +
Sbjct: 265 PKPPLEHFGSVEFDVDEDSEKLHKIISPSNGDYKLPAQLVQRYVKVPCGSRLVVLLSIL- 323
Query: 647 GKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE--------------NIAFFKLH 691
+++ E E S K++VF +T D D+H L S L F+LH
Sbjct: 324 ---KHLFEREASQKIVVFFSTCDAVDFHYSLFSAFLWPANLHPETEDRQMFLRFKTFQLH 380
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G+M +R F+TF+ KS +L+ TDVAARGLD P V I+QY +P +++YVHRVGRT
Sbjct: 381 GNMKHEDRRTTFQTFKKEKSALLLSTDVAARGLDFPKVRCIIQYDSPGEASEYVHRVGRT 440
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR+G G SLLFL P E+ +++L+ + + E L L + + + + +
Sbjct: 441 ARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYSLLKVLDSFPLSGQKHHIKKFISLEM 500
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+ LQ + ES + + + A + SWVR Y ++ +L+ IF K++HLGH AKS
Sbjct: 501 HPWSLYLQKALESFIFAEPKMKKLAKDAFCSWVRAYTAHRGELKRIFQVKKLHLGHVAKS 560
Query: 872 FALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLS 919
FAL+D PS++ K+ +M K K +++ SK++ L+
Sbjct: 561 FALKDQPSLVG-----------KSMQMQTKKRKRDQKQQGLSKRKKLA 597
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 175/350 (50%), Gaps = 63/350 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ +I IL G VLV + TG+GKT+AY P+I L + P+I R G +A
Sbjct: 49 MGFEVPTIVQAEAIPVILAGRHVLVNAATGTGKTIAYLAPVINHLHKYDPRIERSAGTFA 108
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL +Q EI KL F WIVP ++ GGE EKAR+RKGISILVATPGRLL
Sbjct: 109 LVLVPTRELCMQVYEILQKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKP-----------Q 167
DH K+T + + + ++ DEADRIL+ G+ ++I E L++L + P Q
Sbjct: 169 DHLKNTSSFLHTNLRWIIFDEADRILELGFGKEIEEILDLLGSRTNGPTIREDAVTSEFQ 228
Query: 168 FQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 227
Q++LLSATL KV HL + + G + KK +P
Sbjct: 229 RQNLLLSATLN--------------EKVNHLAQISLENPVTIGLDG---------KKMQP 265
Query: 228 QFQSVLLSATLTPAVQRLAGMTLQNPIQIDA-ADSTDIHN----TTDSLVIPDSLKQHFI 282
+ P ++ ++ D DS +H + +P L Q ++
Sbjct: 266 K-----------PPLEHFGS------VEFDVDEDSEKLHKIISPSNGDYKLPAQLVQRYV 308
Query: 283 VTPPKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLST 331
P RLV L S + +++ E E S K++VF +T D D+H L S
Sbjct: 309 KVPCGSRLVVLLSIL----KHLFEREASQKIVVFFSTCDAVDFHYSLFSA 354
>gi|224145000|ref|XP_002325490.1| predicted protein [Populus trichocarpa]
gi|222862365|gb|EEE99871.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 212/583 (36%), Positives = 316/583 (54%), Gaps = 67/583 (11%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+FA S+ G+HP + L E + T VQ +I IL G VLV + TG+GKT+A
Sbjct: 17 IFASCSFSAL-GLHPSLCNQLQERLGFEGPTLVQAQAIPVILSGRHVLVNAATGTGKTVA 75
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y PII L +I R++G +A++++PTREL LQ EI KL F WIVP ++ GGE
Sbjct: 76 YLAPIIHHLHSYPSRIDRENGTFALVLVPTRELCLQVYEILQKLLHRFHWIVPGYVMGGE 135
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
EKAR+RKGISILVATPGRLLDH K+T + + + ++ DEADRIL+ G+ ++I E
Sbjct: 136 NRSKEKARLRKGISILVATPGRLLDHLKNTASFVHTNLRWIIFDEADRILELGFGKEIEE 195
Query: 566 FLEILKKQKP---------------QFQSILLSATLTPAVQRLAGMTLQNPIQI------ 604
L++L ++ Q Q++LLSATL V LA ++L+NP+ I
Sbjct: 196 ILDLLGSRQIGSVGNGNQVSSLSNFQGQNLLLSATLNEKVNHLAKISLENPVMIGLDDKK 255
Query: 605 ------------------DAADSTDIHN-TTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
D + + N +T +P L Q ++ P RL L S +
Sbjct: 256 IQPDQSVDHIETAESDEDDGLGYSKVKNSSTGDYKLPAQLVQRYVKVPCGSRLAVLLSIL 315
Query: 646 LGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVL--------GENIAFF------KL 690
+N+ E E S K++VF +T D D+H LLS E+ F +L
Sbjct: 316 ----KNLFEREASHKIVVFFSTCDAVDFHYSLLSEFCWSPNSQSEAEHTERFLRCNTLRL 371
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG+M Q +R F+ F++ KS +L+ TD+AARGLD P V IVQY +P +T+YVHRVGR
Sbjct: 372 HGNMKQEDRRNTFQAFKTEKSALLLSTDIAARGLDFPKVRCIVQYDSPGEATEYVHRVGR 431
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR---LA 807
TAR+G +G SLLFL P EV + +L+ + + E + L+ L S + G + R
Sbjct: 432 TARLGEKGDSLLFLQPVEVDYLHDLEKHGVSLTEYPI---LKVLGSFPLYGQVYRARKFV 488
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
++ LQ + ES +L + ++ A + SWVR Y ++ DL+ IF K++HLGH
Sbjct: 489 SLDLHPWVLYLQRALESFILSEPRMNKLAQTAFCSWVRAYTAHRGDLKRIFMVKKLHLGH 548
Query: 868 FAKSFALRDAPSVIS-GIGKPKNKEELKNKKMAINKEKSFKQR 909
++SF L+ PS++ K + + K+ ++K++ F ++
Sbjct: 549 VSRSFGLKQQPSLVGQSFQNQSKKRKREGKQKGLSKQRKFTRK 591
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 172/341 (50%), Gaps = 58/341 (17%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I IL G VLV + TG+GKT+AY PII L +I R++G +A++++PT
Sbjct: 46 TLVQAQAIPVILSGRHVLVNAATGTGKTVAYLAPIIHHLHSYPSRIDRENGTFALVLVPT 105
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL LQ EI KL F WIVP ++ GGE EKAR+RKGISILVATPGRLLDH K+T
Sbjct: 106 RELCLQVYEILQKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKNT 165
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP---------------QFQSI 171
+ + + ++ DEADRIL+ G+ ++I E L++L ++ Q Q++
Sbjct: 166 ASFVHTNLRWIIFDEADRILELGFGKEIEEILDLLGSRQIGSVGNGNQVSSLSNFQGQNL 225
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LLSATL KV HL + + G + KK +P
Sbjct: 226 LLSATLN--------------EKVNHLAKISLENPVMIGLDD---------KKIQPD--- 259
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHN-TTDSLVIPDSLKQHFIVTPPKLRL 290
Q + + + D + + N +T +P L Q ++ P RL
Sbjct: 260 -----------QSVDHIETAESDEDDGLGYSKVKNSSTGDYKLPAQLVQRYVKVPCGSRL 308
Query: 291 VALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
L S + +N+ E E S K++VF +T D D+H LLS
Sbjct: 309 AVLLSIL----KNLFEREASHKIVVFFSTCDAVDFHYSLLS 345
>gi|380030102|ref|XP_003698697.1| PREDICTED: probable ATP-dependent RNA helicase CG8611-like [Apis
florea]
Length = 929
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 228/328 (69%), Gaps = 29/328 (8%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAA----DSTDIHNT--TDSLVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+ + +P+ IDAA ++TD T + LV+P S+ Q +IV
Sbjct: 591 QTILLSATLTQAVEKLAGLAMNHPVFIDAAKENLETTDSDGTELNEDLVVPQSVNQSYIV 650
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL----GEN--- 684
TPPKLRLV L+++I GKCQ+ + K+L+FMATQDM DYHTE+LS+VL EN
Sbjct: 651 TPPKLRLVTLSAYIAGKCQSHGQ---HKILIFMATQDMVDYHTEILSSVLTKPIDENDDD 707
Query: 685 ------IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
+ FFKLHGSM+Q ER E+FKTFR KSG+L+CTDVAARGLDLP VD ++QYT P
Sbjct: 708 SDPLVVMEFFKLHGSMTQKERIEIFKTFRQAKSGILLCTDVAARGLDLPKVDCVIQYTGP 767
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+S+ DYVHR+GRTAR G GS+ + L P E++ V L++RRIRI + + D L L+
Sbjct: 768 TSARDYVHRIGRTARAGSSGSATILLTPPEIEFVRMLESRRIRIRQESMDDVLDRLM--- 824
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
G LS + AA ALQ FE+ +L+ L ACK YTSW+RFY+SY +D+R IF
Sbjct: 825 --GPLS--DHSSPRNAAIALQNDFENLILEDTKLREKACKAYTSWIRFYSSYPRDMRQIF 880
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIGK 886
N + +HLGH+AKSFALR+ P I GIGK
Sbjct: 881 NRRDLHLGHYAKSFALRETPQRIGGIGK 908
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 162/217 (74%), Gaps = 1/217 (0%)
Query: 359 GPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTV 418
G +SSLF +NP+IPN+ R +KP++E +F T++ + IHPFM NL + M+IT++TTV
Sbjct: 250 GKVSSLFGHNPEIPNIGQRLVKPINEPIFTATTFTDL-NIHPFMISNLEQNMHITKMTTV 308
Query: 419 QQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 478
QQ +I I DVLVRSQTGSGKTLAYA+PI++ L ++RPK++R G+ A+I++PTREL
Sbjct: 309 QQKAIPQIFSRKDVLVRSQTGSGKTLAYALPIVECLHKIRPKLNRNSGLKALIVVPTREL 368
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETL 538
ALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLLDH + T L
Sbjct: 369 ALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLLDHIQRTAAL 428
Query: 539 KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 575
K S V + VLDEADR+ D GYE+DI+ + LK P
Sbjct: 429 KLSDVRYFVLDEADRMFDMGYEKDISGIVSALKVSTP 465
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 127/166 (76%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+IT++TTVQQ +I I DVLVRSQTGSGKTLAYA+PI++ L ++RPK++R G+ A
Sbjct: 300 MHITKMTTVQQKAIPQIFSRKDVLVRSQTGSGKTLAYALPIVECLHKIRPKLNRNSGLKA 359
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLL
Sbjct: 360 LIVVPTRELALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLL 419
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 166
DH + T LK S V + VLDEADR+ D GYE+DI+ + LK P
Sbjct: 420 DHIQRTAALKLSDVRYFVLDEADRMFDMGYEKDISGIVSALKVSTP 465
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 81/108 (75%), Gaps = 9/108 (8%)
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAA----DSTDIHNT--TDSLVIPDSLKQHFIV 283
Q++LLSATLT AV++LAG+ + +P+ IDAA ++TD T + LV+P S+ Q +IV
Sbjct: 591 QTILLSATLTQAVEKLAGLAMNHPVFIDAAKENLETTDSDGTELNEDLVVPQSVNQSYIV 650
Query: 284 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
TPPKLRLV L+++I GKCQ+ + K+L+FMATQDM DYHTE+LS+
Sbjct: 651 TPPKLRLVTLSAYIAGKCQSHG---QHKILIFMATQDMVDYHTEILSS 695
>gi|328778831|ref|XP_003249554.1| PREDICTED: probable ATP-dependent RNA helicase CG8611-like [Apis
mellifera]
Length = 909
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/396 (46%), Positives = 250/396 (63%), Gaps = 53/396 (13%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAAD------STDIHNTTDSLVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+ + +P+ IDAA +D + LV+P S+ Q +IV
Sbjct: 521 QTILLSATLTQAVEKLAGLAMNHPVFIDAAKENLETIDSDGTELNEDLVVPQSVNQSYIV 580
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA----- 686
TPPKLRLV L+++I GKCQ+ + K+L+FMATQDM DYHTE+LS+VL + I
Sbjct: 581 TPPKLRLVTLSAYITGKCQSHGQ---HKILIFMATQDMVDYHTEILSSVLTKPIDEDDDD 637
Query: 687 --------FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
FFKLHGSM+Q ER E+FKTFR SGVL+CTDVAARGLDLP VD ++QYT P
Sbjct: 638 SDPLVVMEFFKLHGSMTQKERIEIFKTFRQANSGVLLCTDVAARGLDLPKVDCVIQYTGP 697
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+S+ DYVHR+GRTAR G GS+ + L P E++ V L++RRIRI + + D L L+
Sbjct: 698 TSARDYVHRIGRTARAGSSGSATILLTPPEIEFVRMLESRRIRIRQESMDDVLDRLM--- 754
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
G LS+ + + AA ALQ FE+ +L+ L ACK YTSW+RFY+SY +D+R IF
Sbjct: 755 --GPLSKHSSAH--NAAVALQNDFENLILEDTKLRERACKAYTSWIRFYSSYPRDMRQIF 810
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKM---------------AINKE 903
N + +HLGH+AKSFALR+ P I GIG+ +++E K+ K
Sbjct: 811 NRRDLHLGHYAKSFALRETPQRIGGIGRRLHEKECTRKRQLNDNRLTRSRKPDGEPAKKR 870
Query: 904 KSFKQRGNFSKKQML--------SEFDSGL-PQRKP 930
+ +Q G +K +L SE+ SGL P +KP
Sbjct: 871 RQDRQGGEEAKMGLLRRVRMLNTSEYGSGLEPVKKP 906
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 163/217 (75%), Gaps = 1/217 (0%)
Query: 359 GPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTV 418
G ISSLF +NP+IPN+ R +KP++E +F T++ + IHPFM NL + M+IT++TTV
Sbjct: 181 GKISSLFGHNPEIPNIGQRLVKPINEPIFTGTTFTDL-NIHPFMISNLEQNMHITKMTTV 239
Query: 419 QQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 478
QQ +I I DVLVRSQTGSGKTLAYA+PI++ L ++RPK++R G+ A++++PTREL
Sbjct: 240 QQKAIPQIFSRKDVLVRSQTGSGKTLAYALPIVECLHKIRPKLNRNSGLNALVVVPTREL 299
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETL 538
ALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLLDH + T L
Sbjct: 300 ALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLLDHIQRTAAL 359
Query: 539 KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 575
K S V++ VLDEADR+ D GYE+DI+ + LK P
Sbjct: 360 KLSDVKYFVLDEADRMFDMGYEKDISGIVSALKVSTP 396
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 128/166 (77%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+IT++TTVQQ +I I DVLVRSQTGSGKTLAYA+PI++ L ++RPK++R G+ A
Sbjct: 231 MHITKMTTVQQKAIPQIFSRKDVLVRSQTGSGKTLAYALPIVECLHKIRPKLNRNSGLNA 290
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQT E F KL K FTWIVP +L GGEK K+EKAR+RKG +ILV TPGRLL
Sbjct: 291 LVVVPTRELALQTYECFLKLIKPFTWIVPGYLAGGEKRKAEKARLRKGCNILVGTPGRLL 350
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 166
DH + T LK S V++ VLDEADR+ D GYE+DI+ + LK P
Sbjct: 351 DHIQRTAALKLSDVKYFVLDEADRMFDMGYEKDISGIVSALKVSTP 396
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 78/108 (72%), Gaps = 9/108 (8%)
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAAD------STDIHNTTDSLVIPDSLKQHFIV 283
Q++LLSATLT AV++LAG+ + +P+ IDAA +D + LV+P S+ Q +IV
Sbjct: 521 QTILLSATLTQAVEKLAGLAMNHPVFIDAAKENLETIDSDGTELNEDLVVPQSVNQSYIV 580
Query: 284 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
TPPKLRLV L+++I GKCQ+ + K+L+FMATQDM DYHTE+LS+
Sbjct: 581 TPPKLRLVTLSAYITGKCQSHG---QHKILIFMATQDMVDYHTEILSS 625
>gi|357472211|ref|XP_003606390.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355507445|gb|AES88587.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 613
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 312/574 (54%), Gaps = 60/574 (10%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+FA S+ G+H + L E M T +Q +I +L G LV + TG+GKT+A
Sbjct: 39 VFASCSFSSL-GLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIA 97
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y PII LQ ++ R DG +A++++PTREL LQ EI KL F WIVP ++ GGE
Sbjct: 98 YLAPIIHHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGE 157
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
EKAR+RKGISIL+ATPGRLLDH K+T + ++ + ++ DEADRIL+ G+ ++I E
Sbjct: 158 SRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQE 217
Query: 566 FLEIL---------------KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA---- 606
L +L + K Q Q++LLSATL V LA ++L++P+ I
Sbjct: 218 ILNLLGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKI 277
Query: 607 ---------------ADSTDIHNT----TDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
D+ D H++ + +P+ L Q ++ P RL L S +
Sbjct: 278 MEPTSRIRFDNSDCDEDNEDTHSSKIPAIGAYKVPEQLIQRYMKVPCGSRLAILLSIL-- 335
Query: 648 KCQNVNEDEES-KMLVFMATQDMADYHTELLSTVL---------GENIAF-----FKLHG 692
+++ E E S K+++F +T D D+H L++ L G F +LHG
Sbjct: 336 --KHLFEREPSQKVVLFFSTCDAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTLRLHG 393
Query: 693 SMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTA 752
+M Q +RT F+ F++ KS +L+ TDV+ARGLD P V I+QY +P +T+YVHRVGRTA
Sbjct: 394 NMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTA 453
Query: 753 RVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVE 812
R+G G SLLFL PSE+ +++L+ + + E L L + + ++ + ++
Sbjct: 454 RLGERGESLLFLQPSEIDYLQDLEKHGVSLVEYPLLKVLDSFPLSAHKNNIKKSVFIDMH 513
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
LQ + ES + + + A + + SWVR Y ++ +L+ IF K++HLGH AKSF
Sbjct: 514 PWIMCLQKALESCISSKPKMEELAKRAFCSWVRAYTAHRGELKRIFMVKKLHLGHVAKSF 573
Query: 873 ALRDAPSVI--SGIGKPKNKEELKNKKMAINKEK 904
L+ PS++ S + K ++ + K NK K
Sbjct: 574 GLKQIPSLVGKSFQNQTKKRKRFEKKNGPSNKRK 607
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 174/354 (49%), Gaps = 74/354 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +Q +I +L G LV + TG+GKT+AY PII LQ ++ R DG +A
Sbjct: 62 MGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFA 121
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ EI KL F WIVP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 122 LVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLL 181
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL---------------KKQK 165
DH K+T + ++ + ++ DEADRIL+ G+ ++I E L +L + K
Sbjct: 182 DHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQESGVPRPSK 241
Query: 166 PQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 225
Q Q++LLSATL KV HL + + G + I E
Sbjct: 242 FQRQNLLLSATLN--------------EKVNHLAKISLEDPVMIGIDDKIME-------- 279
Query: 226 KPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAA----DSTDIHNT----TDSLVIPDSL 277
P + I+ D + D+ D H++ + +P+ L
Sbjct: 280 --------------PTSR----------IRFDNSDCDEDNEDTHSSKIPAIGAYKVPEQL 315
Query: 278 KQHFIVTPPKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
Q ++ P RL L S + +++ E E S K+++F +T D D+H L++
Sbjct: 316 IQRYMKVPCGSRLAILLSIL----KHLFEREPSQKVVLFFSTCDAVDFHYSLIT 365
>gi|168030888|ref|XP_001767954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680796|gb|EDQ67229.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 552
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 215/542 (39%), Positives = 304/542 (56%), Gaps = 65/542 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
++ + T +Q+ +I IL G DVLV S TGSGKT+ Y PII LQ P+++R +G A
Sbjct: 1 LSFSAPTLIQKSAIPIILSGRDVLVNSGTGSGKTMVYLAPIINALQSYEPRLTRSEGTLA 60
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++++PTREL LQ E+ K+ F W+VP + GGE EKAR+RKG++ILVATPGRLL
Sbjct: 61 LVLVPTRELCLQVCEVAEKVVHRFHWLVPGCVMGGENRGKEKARLRKGVTILVATPGRLL 120
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ---KPQFQSILLSATL 586
DH K+T + + ++ LV DEADR+LD G+E+DI LE+L + K Q ILLSATL
Sbjct: 121 DHLKNTASFRHDRLRWLVFDEADRLLDLGFEKDIEAILEVLGSRDDKKKTRQHILLSATL 180
Query: 587 TPAVQRLAGMTLQNP--IQIDAADSTD-------------------IH--NTTDS----- 618
V++LA ++L NP I +D A S + IH NT D+
Sbjct: 181 NERVEQLAALSLVNPATIGLDEAISAEMPSLRETKNGAAMSQQKSLIHDRNTGDTGPSDG 240
Query: 619 ---LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 675
IP L Q F+ P LRLVAL + K + + K++VF +T D D+H
Sbjct: 241 YTEYRIPSQLVQSFLKVPCSLRLVALLGLLQQKSRG---NGSCKLVVFFSTCDAVDFHY- 296
Query: 676 LLSTVLGE--------------------NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
TV+ E + F+LHGSM+Q +RTE + F S +L+
Sbjct: 297 ---TVVNEFQWSPTPWKDGRENDERKLLSCEAFRLHGSMAQKDRTEAYNQFGKASSAILL 353
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL 775
CTDVAARGLD V IVQY P + +YVHRVGRTAR+G +G ++LFL PSE + +EEL
Sbjct: 354 CTDVAARGLDFQNVSGIVQYEPPGDAAEYVHRVGRTARLGQKGEAILFLQPSESEYMEEL 413
Query: 776 QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTS 835
+ + ++E+ L L L + + D + + A +Q + E+ V +
Sbjct: 414 KKHGVTLQELSLPQLLDRLQERRGKKD-DFFSAVEMHPLAGLMQKALEAFVAAKPDARLL 472
Query: 836 ACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKN 895
A + S+VR YA++ +L+ IF +++HLGH AKSF LRDAPS+ GK NK+ +K
Sbjct: 473 AVDSFRSYVRAYAAHRGELKSIFQVRKLHLGHVAKSFGLRDAPSL---FGKSVNKQNMKK 529
Query: 896 KK 897
+K
Sbjct: 530 EK 531
Score = 179 bits (454), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++ + T +Q+ +I IL G DVLV S TGSGKT+ Y PII LQ P+++R +G A
Sbjct: 1 LSFSAPTLIQKSAIPIILSGRDVLVNSGTGSGKTMVYLAPIINALQSYEPRLTRSEGTLA 60
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ E+ K+ F W+VP + GGE EKAR+RKG++ILVATPGRLL
Sbjct: 61 LVLVPTRELCLQVCEVAEKVVHRFHWLVPGCVMGGENRGKEKARLRKGVTILVATPGRLL 120
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ---KPQFQSILLSATL 177
DH K+T + + ++ LV DEADR+LD G+E+DI LE+L + K Q ILLSATL
Sbjct: 121 DHLKNTASFRHDRLRWLVFDEADRLLDLGFEKDIEAILEVLGSRDDKKKTRQHILLSATL 180
Query: 178 T 178
Sbjct: 181 N 181
>gi|383848495|ref|XP_003699885.1| PREDICTED: probable ATP-dependent RNA helicase CG8611-like
[Megachile rotundata]
Length = 914
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 186/395 (47%), Positives = 253/395 (64%), Gaps = 52/395 (13%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 631
Q+ILLSATLT +V++LAG+ + +P+ +DAA + + + L++P S+ Q +IV
Sbjct: 527 QTILLSATLTQSVEKLAGLAMNHPVFVDAATENLKVSGGVVADLNEDLIVPQSMVQSYIV 586
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------- 683
TPPKLR+V L+++I GKCQ+ + K+LVFMATQDM DYHTE+LS+VL +
Sbjct: 587 TPPKLRMVTLSAYIAGKCQS---HGQHKILVFMATQDMVDYHTEILSSVLTKPVDEDDDD 643
Query: 684 -----NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
++ FFKLHG+M+Q ERT+VFKTFR SGVL+CTDVAARGLDLP VD +VQYT P
Sbjct: 644 SDPLVDVEFFKLHGNMTQKERTDVFKTFRQANSGVLLCTDVAARGLDLPKVDCVVQYTGP 703
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+S+ DYVHR+GRTAR G GS+ +FLIPSE+ V L++RRIRI++ + D L L+S
Sbjct: 704 TSARDYVHRIGRTARAGSSGSATIFLIPSEIDFVRMLESRRIRIKQENMDDVLDKLMS-- 761
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
LS+ + + + AA ALQ FE+ VL+ L A + YTSW+RFY+ Y +D+R IF
Sbjct: 762 ---PLSKHS--STQGAAIALQNEFENMVLEDPKLRDKAYRAYTSWIRFYSGYPRDMREIF 816
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGI---------GKPKNKEELKN-----------KKM 898
N K +HLGHFAKSFALR P I GI KP++ L KK
Sbjct: 817 NRKNVHLGHFAKSFALRQTPQRIGGIEKKLREKEVSKPQHNNRLHKPTTEKPDGEPAKKQ 876
Query: 899 AINKEKSFKQRGNFSKKQML--SEFDSGL-PQRKP 930
++ ++ G + +ML SE+DSGL P +KP
Sbjct: 877 QHQRQGDERKPGLLKRVRMLNTSEYDSGLEPVKKP 911
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 332 KKKIKK-LKEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPT 390
+K +KK ++ NI +N + + SG ISSLF +NP+IP++ R +KP++E +FA T
Sbjct: 161 EKDVKKPTRKSNISVENEKGTQVLHKSSGKISSLFGHNPEIPHIGQRLVKPINEPVFAAT 220
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
++ + IHPFM NL + M IT++T VQQ +I IL G DVL+RSQTGSGKTLAYA+PI
Sbjct: 221 NFTDL-NIHPFMISNLEQNMQITKMTIVQQKAIPQILSGKDVLIRSQTGSGKTLAYALPI 279
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
++ L +RPK++R G+ A++++PTRELALQT E F KL KSFTW+VP +L GGEK K+E
Sbjct: 280 VEFLHRIRPKLNRNSGLKALVVVPTRELALQTYECFLKLVKSFTWVVPGYLAGGEKRKAE 339
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
KAR+RKG +IL++TPGRLLDH + T LK + +++ VLDEADR+ D GYE+DI+ + L
Sbjct: 340 KARLRKGCNILISTPGRLLDHVQRTAALKLTDIKYFVLDEADRMFDLGYEKDISSIVSAL 399
Query: 571 K 571
K
Sbjct: 400 K 400
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 128/162 (79%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M IT++T VQQ +I IL G DVL+RSQTGSGKTLAYA+PI++ L +RPK++R G+ A
Sbjct: 239 MQITKMTIVQQKAIPQILSGKDVLIRSQTGSGKTLAYALPIVEFLHRIRPKLNRNSGLKA 298
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQT E F KL KSFTW+VP +L GGEK K+EKAR+RKG +IL++TPGRLL
Sbjct: 299 LVVVPTRELALQTYECFLKLVKSFTWVVPGYLAGGEKRKAEKARLRKGCNILISTPGRLL 358
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 162
DH + T LK + +++ VLDEADR+ D GYE+DI+ + LK
Sbjct: 359 DHVQRTAALKLTDIKYFVLDEADRMFDLGYEKDISSIVSALK 400
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 78/108 (72%), Gaps = 9/108 (8%)
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAADST------DIHNTTDSLVIPDSLKQHFIV 283
Q++LLSATLT +V++LAG+ + +P+ +DAA + + + L++P S+ Q +IV
Sbjct: 527 QTILLSATLTQSVEKLAGLAMNHPVFVDAATENLKVSGGVVADLNEDLIVPQSMVQSYIV 586
Query: 284 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
TPPKLR+V L+++I GKCQ+ + K+LVFMATQDM DYHTE+LS+
Sbjct: 587 TPPKLRMVTLSAYIAGKCQS---HGQHKILVFMATQDMVDYHTEILSS 631
>gi|407038935|gb|EKE39381.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 558
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 196/512 (38%), Positives = 289/512 (56%), Gaps = 51/512 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ + + VQ +I IL D LV++QTGSGKTLAY +P I + PK+ R DG++
Sbjct: 26 LQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFC 85
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL Q ++ T L S +VPS + GG+ KSEKARIRKG++ILV TPGRLL
Sbjct: 86 LILTPTRELTQQVYDVLTILTTSIIGLVPSIVVGGDSKKSEKARIRKGVNILVGTPGRLL 145
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH T LK KVE L++DEADR+LD G+E+D+ E + + K + SIL+SATLT +
Sbjct: 146 DHINSTNNLKLDKVEFLIMDEADRVLDAGFEKDVIEIINHVNKNRT---SILVSATLTES 202
Query: 590 VQRLAGMTLQNPIQIDAADSTDI-------------------------HNTTDSLVIPDS 624
V++L+ + L+NP+ ID + D L++P +
Sbjct: 203 VKKLSNLALKNPVFIDGDKRENAKERKKLKLIKEEENNQEKTEKIINEEKIEDKLILPST 262
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQN--VNEDEESKMLVFMATQDMADYHTELLS---- 678
LKQ+ I+ K RL L + C + E + K++VF + +YH L S
Sbjct: 263 LKQYAILITDKYRLAYLIA-----CLRTFLKESIQRKIIVFFSCIQSVNYHYSLFSQLQF 317
Query: 679 ---TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
T + + F+LHG ++ ER + + F K VL TDVAARG+DL +DWI+QY
Sbjct: 318 MDKTPILPETSLFRLHGDLTTVERHDGMQKFIKSKKAVLFTTDVAARGIDLKDIDWIIQY 377
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
P +++Y+HRVGRTAR+G G+SLL L+ SE + V L+N + IEE+K + ++
Sbjct: 378 DPPGETSEYIHRVGRTARIGRNGNSLLMLLESEGEYVNLLRNEGVIIEEMKRDEVVK--- 434
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
S+ M G D V + +Q+ E ++ + L A K + + +R Y ++ +LR
Sbjct: 435 SLNMAG-----GDKKVISRLHEMQLQVEKLLIDNEELKEMAIKSFQAHLRSYTTHRGELR 489
Query: 856 HIFNFKQIHLGHFAKSFALRDAP-SVISGIGK 886
IF+ K++H+GH KSF +RD P SV+S I K
Sbjct: 490 KIFSIKKLHIGHICKSFGIRDTPTSVMSVIKK 521
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 176/332 (53%), Gaps = 46/332 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + + VQ +I IL D LV++QTGSGKTLAY +P I + PK+ R DG++
Sbjct: 26 LQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFC 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL Q ++ T L S +VPS + GG+ KSEKARIRKG++ILV TPGRLL
Sbjct: 86 LILTPTRELTQQVYDVLTILTTSIIGLVPSIVVGGDSKKSEKARIRKGVNILVGTPGRLL 145
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH T LK KVE L++DEADR+LD G+E+D+ E + + K + SIL+SATLT +
Sbjct: 146 DHINSTNNLKLDKVEFLIMDEADRVLDAGFEKDVIEIINHVNKNRT---SILVSATLTES 202
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
K+ +L L + + G +R+ A K++ + + +
Sbjct: 203 V-----------KKLSNLAL--KNPVFIDGDKRENA-------KERKKLKLIKEEENNQE 242
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+++ N +I+ D L++P +LKQ+ I+ K RL L +
Sbjct: 243 KTEKII-----NEEKIE-----------DKLILPSTLKQYAILITDKYRLAYLIA----- 281
Query: 301 CQN--VNEDEESKMLVFMATQDMADYHTELLS 330
C + E + K++VF + +YH L S
Sbjct: 282 CLRTFLKESIQRKIIVFFSCIQSVNYHYSLFS 313
>gi|320581178|gb|EFW95399.1| ATP-dependent RNA helicase DBP7 (DEAD-box protein 7) [Ogataea
parapolymorpha DL-1]
Length = 649
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 322/572 (56%), Gaps = 57/572 (9%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNE---GMNITQVTT 417
+SSLF NP+I + P + +S + AP F G+ + +N G I T
Sbjct: 91 VSSLFTANPEIQDRPIAEIDVLSPS-NAPLDTSSFSGLG--LNDRINAHLLGQRIENPTK 147
Query: 418 VQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTR 476
+QQ I +L G D+ V++QTGSGKTLA+A+PI QKL E+ P I R G++A+I+ PTR
Sbjct: 148 IQQQVIPRLLAGNNDLFVQAQTGSGKTLAFALPIFQKLMEI-PNIDRTSGLFALILAPTR 206
Query: 477 ELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTE 536
ELA Q +F L + IV + GGEK KSEKAR+RKG++ILVATPGRL+DH +HT+
Sbjct: 207 ELATQIYSVFESLSRCHHKIVAGNVIGGEKKKSEKARLRKGVNILVATPGRLVDHIEHTQ 266
Query: 537 TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ---------SILLSATLT 587
L SK+ ++VLDE DR+++ G+E I + L + Q SIL SAT+
Sbjct: 267 KLDLSKIRYVVLDEGDRLMELGFEESITKILHSISSTAVPLQYPSLPAKRISILCSATIK 326
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFIL 646
V++L ++L+ ++ T++ + +PD L Q +V PPKLR V LA
Sbjct: 327 STVKKLGELSLEK---------AELVTTSEQITKVPDQLVQQVVVIPPKLRFVTLA---- 373
Query: 647 GKCQNVNEDE-ESKMLVFMATQDMADYHTELLS----------TVLGENIAFFKLHGSMS 695
G +N+ +D+ S+ +VF + D+H L+ T+ G +I FKLHGS+S
Sbjct: 374 GTLKNLIKDQTASRTIVFFSCSGSVDFHFIALTRKAASEDTSGTLFGSSI--FKLHGSLS 431
Query: 696 QSERTEVFKTFR-SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV 754
Q RT K F S + +L+CTDVA+RGLDLP ++ +V++ P + D++HRVGRTAR
Sbjct: 432 QQTRTSTLKQFADSPNNAILLCTDVASRGLDLPHINNVVEFDPPFALDDHLHRVGRTARA 491
Query: 755 GHEGSSLLFLIPSE----VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
G G S+LFL+P + +K++E L I+ + K + L+ E G+
Sbjct: 492 GSLGKSVLFLLPGDEENYLKIIEPLHPSGIQFK--KYESVLKEAFEKPGE------KGGS 543
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+T AT + E +L++ A G+ S ++ YA++ R FN K+IHLGH AK
Sbjct: 544 WDTQATTFHLDLERWLLEEPRAKEIAANGFISHIKAYATHLASERECFNVKKIHLGHLAK 603
Query: 871 SFALRDAPSVISGIGKPKNKEELKNKKMAINK 902
SF LR+ P ++ G+ K KE+ K+K + + K
Sbjct: 604 SFGLRETPKKLASGGERKKKEDGKSKMLRMAK 635
Score = 162 bits (410), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 3 ITQVTTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
I T +QQ I +L G D+ V++QTGSGKTLA+A+PI QKL E+ P I R G++A+
Sbjct: 142 IENPTKIQQQVIPRLLAGNNDLFVQAQTGSGKTLAFALPIFQKLMEI-PNIDRTSGLFAL 200
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA Q +F L + IV + GGEK KSEKAR+RKG++ILVATPGRL+D
Sbjct: 201 ILAPTRELATQIYSVFESLSRCHHKIVAGNVIGGEKKKSEKARLRKGVNILVATPGRLVD 260
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H +HT+ L SK+ ++VLDE DR+++ G+E I + L + Q L A
Sbjct: 261 HIEHTQKLDLSKIRYVVLDEGDRLMELGFEESITKILHSISSTAVPLQYPSLPAKRISIL 320
Query: 182 CWCKHTETLKFSKVEHLVLDEADRI 206
C T+K K+ L L++A+ +
Sbjct: 321 CSATIKSTVK--KLGELSLEKAELV 343
>gi|67472869|ref|XP_652222.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56469043|gb|EAL46836.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709951|gb|EMD49114.1| ATP-dependent RNA helicase DBP7, putative [Entamoeba histolytica
KU27]
Length = 558
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/512 (38%), Positives = 289/512 (56%), Gaps = 51/512 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ + + VQ +I IL D LV++QTGSGKTLAY +P I + PK+ R DG++
Sbjct: 26 LQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFC 85
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL Q ++ T L S +VPS + GG+ KSEKARIRKG++ILV TPGRLL
Sbjct: 86 LILTPTRELTQQVYDVLTILTTSIIGLVPSIVVGGDSKKSEKARIRKGVNILVGTPGRLL 145
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH T LK KVE L++DEADR+LD G+E+D+ E + + K + SIL+SATLT +
Sbjct: 146 DHINSTNNLKLDKVEFLIMDEADRVLDAGFEKDVIEIINHVNKNRT---SILVSATLTES 202
Query: 590 VQRLAGMTLQNPIQIDAADSTDIH-------------------------NTTDSLVIPDS 624
V++L+ + L+NP+ ID + D L++P +
Sbjct: 203 VKKLSNLALKNPVFIDGDKRENAKERKKLKLIKEEENNQEKTEKIINEDKIEDKLILPST 262
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQN--VNEDEESKMLVFMATQDMADYHTELLS---- 678
LKQ+ ++ K RL L + C + E + K++VF + +YH L S
Sbjct: 263 LKQYAMLITDKYRLAYLIA-----CLRTFLKESIQRKIIVFFSCIQSVNYHYSLFSQLQF 317
Query: 679 ---TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
T + + F+LHG ++ ER + + F K VL TDVAARG+DL +DWI+QY
Sbjct: 318 MDKTPILPETSLFRLHGDLTTVERHDGMQKFIKSKKAVLFTTDVAARGIDLKDIDWIIQY 377
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
P +++Y+HRVGRTAR+G G+SLL L+ SE + V L+N + IEE+K + ++
Sbjct: 378 DPPGETSEYIHRVGRTARIGRNGNSLLMLLESEGEYVNLLRNEGVIIEEMKRDEVVK--- 434
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
S+ M G D V + +Q+ E ++ + L A K + + +R Y ++ +LR
Sbjct: 435 SLNMAG-----GDKKVISRLHEMQLQVEKLLIDNEELKEMAIKSFQAHLRSYTTHRGELR 489
Query: 856 HIFNFKQIHLGHFAKSFALRDAP-SVISGIGK 886
IF+ K++H+GH KSF +RD P SV+S I K
Sbjct: 490 KIFSIKKLHIGHICKSFGIRDTPTSVMSVIKK 521
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 177/332 (53%), Gaps = 46/332 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + + VQ +I IL D LV++QTGSGKTLAY +P I + PK+ R DG++
Sbjct: 26 LQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFC 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL Q ++ T L S +VPS + GG+ KSEKARIRKG++ILV TPGRLL
Sbjct: 86 LILTPTRELTQQVYDVLTILTTSIIGLVPSIVVGGDSKKSEKARIRKGVNILVGTPGRLL 145
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH T LK KVE L++DEADR+LD G+E+D+ E + + K + SIL+SATLT +
Sbjct: 146 DHINSTNNLKLDKVEFLIMDEADRVLDAGFEKDVIEIINHVNKNRT---SILVSATLTES 202
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
K+ +L L + + G +R+ A+ + LK K + +
Sbjct: 203 V-----------KKLSNLAL--KNPVFIDGDKRENAKERKKLKLIKEEENN--------- 240
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
++ + ++ I+ D L++P +LKQ+ ++ K RL L +
Sbjct: 241 -QEKTEKIINEDKIE-------------DKLILPSTLKQYAMLITDKYRLAYLIA----- 281
Query: 301 CQN--VNEDEESKMLVFMATQDMADYHTELLS 330
C + E + K++VF + +YH L S
Sbjct: 282 CLRTFLKESIQRKIIVFFSCIQSVNYHYSLFS 313
>gi|19112721|ref|NP_595929.1| ATP-dependent RNA helicase Dbp7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74676045|sp|O60173.1|DBP7_SCHPO RecName: Full=ATP-dependent RNA helicase dbp7
gi|3116113|emb|CAA18864.1| ATP-dependent RNA helicase Dbp7 (predicted) [Schizosaccharomyces
pombe]
Length = 709
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 307/558 (55%), Gaps = 60/558 (10%)
Query: 384 EALFAPTSYEEFPGIH--PFMKKNLNEGMNITQVTTVQQLSIQPIL--DGGDVLVRSQTG 439
EA AP F G+ + +LN MNI+ T +Q + +L D D + +QTG
Sbjct: 129 EASNAPIKTTNFAGVQLDTQLADHLNNKMNISAPTAIQSCCLPALLNTDDKDAFIEAQTG 188
Query: 440 SGKTLAYAIPIIQKLQEMRPKI-SRKDGIYAVIILPTRELALQTLEIFTKLCKS--FTWI 496
SGKTLAY +PI+Q+L + + +R GIYAVI+ PTREL Q + KL + WI
Sbjct: 189 SGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPLSHWI 248
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
V + GGEK KSEKARIRKG++IL+ TPGRL DH ++TE L S+V +VLDE DR++D
Sbjct: 249 VSCNVIGGEKKKSEKARIRKGVNILIGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMD 308
Query: 557 QGYERDIAEFLEILKKQKPQFQ----------SILLSATLTPAVQRLAGMTLQNPIQIDA 606
G+E + + L L+ Q + ++L SAT+ V+RL+ L++ + +
Sbjct: 309 MGFEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVKRLSDSALKDALYLK- 367
Query: 607 ADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
S+ + T D P+ L Q ++V PPKLRLV+L + + ++ K+++F++
Sbjct: 368 --SSIVEETNDGYSQAPEQLLQRYVVVPPKLRLVSLVALLRSHVRSY-----KKIIIFLS 420
Query: 666 TQDMADYHTELLSTVL----------------GENIA------------FFKLHGSMSQS 697
D D+H E + G+ I+ ++LHGS+SQ
Sbjct: 421 CSDSVDFHFEAFRCAINADEMEEAVKEKPDSEGDIISNAPALRIDGKSNVYRLHGSLSQQ 480
Query: 698 ERTEVFKTFRSVK---SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV 754
RT F S + S +L+CTDVAARGLDLP VD +VQY AP S+ DY+HR+GRTAR
Sbjct: 481 IRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLHRIGRTARA 540
Query: 755 GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA 814
GH G++++FL+P E + + L++ + ++ + LLS + D +
Sbjct: 541 GHNGAAIMFLLPKESEYINLLKS-SVSANILEQPNGPSGLLSAGFSQGKTNTND--WQDR 597
Query: 815 ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
AT Q+ E +L+ + + A + +TS+VR YA++ R IFN + +HLGH AKSFAL
Sbjct: 598 ATEWQLELERFILENEPMRNIAKRAFTSYVRAYATHLSSERSIFNMRDLHLGHIAKSFAL 657
Query: 875 RDAPSVISGIGKPKNKEE 892
R+AP ISG K +++
Sbjct: 658 REAPGKISGANSSKPRKQ 675
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1 MNITQVTTVQQLSIQPIL--DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI-SRKDG 57
MNI+ T +Q + +L D D + +QTGSGKTLAY +PI+Q+L + + +R G
Sbjct: 157 MNISAPTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSG 216
Query: 58 IYAVIILPTRELALQTLEIFTKLCKS--FTWIVPSWLTGGEKMKSEKARIRKGISILVAT 115
IYAVI+ PTREL Q + KL + WIV + GGEK KSEKARIRKG++IL+ T
Sbjct: 217 IYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIGT 276
Query: 116 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 164
PGRL DH ++TE L S+V +VLDE DR++D G+E + + L L+ Q
Sbjct: 277 PGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQ 325
>gi|167391287|ref|XP_001739707.1| ATP-dependent RNA helicase DBP7 [Entamoeba dispar SAW760]
gi|165896508|gb|EDR23910.1| ATP-dependent RNA helicase DBP7, putative [Entamoeba dispar SAW760]
Length = 558
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 289/512 (56%), Gaps = 51/512 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ + + VQ +I IL D LV++QTGSGKTLAY +P I + PK+ R DG++
Sbjct: 26 LQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFC 85
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL Q ++ T L S +VPS + GG+ KSEKARIRKG++ILV TPGRLL
Sbjct: 86 LILTPTRELTQQVYDVLTILTTSIIGLVPSIVVGGDSKKSEKARIRKGVNILVGTPGRLL 145
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH T LK KVE L++DEADR+LD G+E+D+ E + + K + SIL+SATLT +
Sbjct: 146 DHINSTNNLKLDKVEFLIMDEADRVLDAGFEKDVIEIINHVNKNRT---SILVSATLTES 202
Query: 590 VQRLAGMTLQNPIQIDAADSTDI-------------------------HNTTDSLVIPDS 624
V++L+ + L+NP+ ID + D L++P +
Sbjct: 203 VKKLSNLALKNPVFIDGDKRENAKERKKLKLIKENGNSQEKTEKLINEEKIEDKLILPST 262
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQN--VNEDEESKMLVFMATQDMADYHTELLS---- 678
LKQ+ ++ K RL L + C + E + K++VF + +YH L S
Sbjct: 263 LKQYAMLITDKYRLAYLIA-----CLRTFLKESIQRKIIVFFSCIQSVNYHYSLFSQLQF 317
Query: 679 ---TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
T + + F+LHG ++ ER + + F K VL TDVAARG+DL +DWI+QY
Sbjct: 318 MDKTPILPETSLFRLHGDLTTVERHDGMQKFIKSKKAVLFTTDVAARGIDLKDIDWIIQY 377
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
P +++Y+HRVGRTAR+G G++LL L+ SE + V L+N + IEE+K + ++
Sbjct: 378 DPPGETSEYIHRVGRTARIGRNGNALLMLLESEGEYVNLLRNEGVIIEEMKRDEVVK--- 434
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
S+ M G D V + +Q+ E ++ + L A K + + +R Y ++ +LR
Sbjct: 435 SLNMAG-----GDKKVISRLHEMQLQVEKLLIDNEELKEMAIKSFQAHLRSYTTHRGELR 489
Query: 856 HIFNFKQIHLGHFAKSFALRDAP-SVISGIGK 886
IF+ K++H+GH KSF +RD P SV+S I K
Sbjct: 490 KIFSIKKLHIGHICKSFGIRDTPTSVMSVIKK 521
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 180/332 (54%), Gaps = 46/332 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + + VQ +I IL D LV++QTGSGKTLAY +P I + PK+ R DG++
Sbjct: 26 LQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFC 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL Q ++ T L S +VPS + GG+ KSEKARIRKG++ILV TPGRLL
Sbjct: 86 LILTPTRELTQQVYDVLTILTTSIIGLVPSIVVGGDSKKSEKARIRKGVNILVGTPGRLL 145
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH T LK KVE L++DEADR+LD G+E+D+ E + + K + SIL+SATL
Sbjct: 146 DHINSTNNLKLDKVEFLIMDEADRVLDAGFEKDVIEIINHVNKNRT---SILVSATL--- 199
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
TE++K K+ +L L + + G +R+ A K++ + + + +
Sbjct: 200 ------TESVK--KLSNLAL--KNPVFIDGDKRENA-------KERKKLKLIKENGNSQE 242
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
++L N +I+ D L++P +LKQ+ ++ K RL L +
Sbjct: 243 KTEKLI-----NEEKIE-----------DKLILPSTLKQYAMLITDKYRLAYLIA----- 281
Query: 301 CQN--VNEDEESKMLVFMATQDMADYHTELLS 330
C + E + K++VF + +YH L S
Sbjct: 282 CLRTFLKESIQRKIIVFFSCIQSVNYHYSLFS 313
>gi|356530461|ref|XP_003533799.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
17-like [Glycine max]
Length = 596
Score = 342 bits (877), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 213/594 (35%), Positives = 312/594 (52%), Gaps = 71/594 (11%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+FA S+ G+ + + L + + T VQ +I IL G LV + TG+GKT+A
Sbjct: 21 VFASCSFSSL-GLDSNLCEQLRDRLGFEVPTLVQAQAIPVILSGRHALVNAATGTGKTVA 79
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y PII LQ +I R DG +A++++PTREL LQ EI KL F WIVP ++ GGE
Sbjct: 80 YLAPIIHHLQGYENRIQRSDGTFALVLVPTRELCLQVYEILQKLLHRFHWIVPGYIMGGE 139
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
K EK+R+RKGISIL+ATPGRLLDH K+T +S + ++ DEADRIL+ G+ +DI E
Sbjct: 140 KRSKEKSRLRKGISILIATPGRLLDHLKNTTAFLYSNLRWIIFDEADRILELGFGKDIEE 199
Query: 566 FLEILKKQKP---------------QFQSILLSATLTPAVQRLAGMTLQNPIQI--DAAD 608
L++L +K Q Q++LLSATL V LA M+L NP+ I D
Sbjct: 200 ILDLLGSRKKGHGDQENTVLTHSKIQRQNLLLSATLNEKVNHLAKMSLDNPVMIGLDGKK 259
Query: 609 STDIHN----------------------TTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
I T +P L Q ++ P RL L S +
Sbjct: 260 MEPISTIKRLDSSESDEDSEDKYSSKVPTVGDYKVPIQLIQRYMKVPCGSRLPVLLSIL- 318
Query: 647 GKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVL--------GENIAF-----FKLHG 692
+++ E E S K+++F +T D D+H LLS G F F+LHG
Sbjct: 319 ---KHLFEREPSQKVVLFFSTCDAVDFHYSLLSEFQFSSYPQTEGVRQVFLGCKTFRLHG 375
Query: 693 SMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTA 752
+M Q +R F+ F++ KS +L+ TDV+ARGLD P V I+QY +P +T+YVHRVGRTA
Sbjct: 376 NMQQEDRRTSFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTA 435
Query: 753 RVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVE 812
R+G G SLLFL P E+ +++L+ + + E + L + K S + +
Sbjct: 436 RLGERGESLLFLQPVEIDYLQDLEKHGVSLTEYPVLKVLDSFPLQKNHTKKSVFLESH-- 493
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
LQ + E+ ++ + + A K + SWVR Y ++ +L+ I K++HLGH AKSF
Sbjct: 494 PWVLCLQKALEAFIMSKPEMDEHARKAFCSWVRAYTAHRGELKRIXMIKKLHLGHVAKSF 553
Query: 873 ALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGLP 926
AL+ PS++ + +NK K K F+++ F+KK+ ++ P
Sbjct: 554 ALKQQPSLVGQSFQKQNK-----------KRKRFEKKNGFTKKRKVASVTECRP 596
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 169/340 (49%), Gaps = 57/340 (16%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I IL G LV + TG+GKT+AY PII LQ +I R DG +A++++PT
Sbjct: 50 TLVQAQAIPVILSGRHALVNAATGTGKTVAYLAPIIHHLQGYENRIQRSDGTFALVLVPT 109
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL LQ EI KL F WIVP ++ GGEK EK+R+RKGISIL+ATPGRLLDH K+T
Sbjct: 110 RELCLQVYEILQKLLHRFHWIVPGYIMGGEKRSKEKSRLRKGISILIATPGRLLDHLKNT 169
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP---------------QFQSI 171
+S + ++ DEADRIL+ G+ +DI E L++L +K Q Q++
Sbjct: 170 TAFLYSNLRWIIFDEADRILELGFGKDIEEILDLLGSRKKGHGDQENTVLTHSKIQRQNL 229
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LLSATL KV HL D + G + KK +P
Sbjct: 230 LLSATLN--------------EKVNHLAKMSLDNPVMIGLDG---------KKMEP---- 262
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
++RL + + T +P L Q ++ P RL
Sbjct: 263 -------ISTIKRLDSSESDEDSEDKYSSKVP---TVGDYKVPIQLIQRYMKVPCGSRLP 312
Query: 292 ALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
L S + +++ E E S K+++F +T D D+H LLS
Sbjct: 313 VLLSIL----KHLFEREPSQKVVLFFSTCDAVDFHYSLLS 348
>gi|20336298|ref|NP_619526.1| probable ATP-dependent RNA helicase DDX31 isoform 2 [Homo sapiens]
gi|162319304|gb|AAI56833.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [synthetic construct]
Length = 585
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/388 (47%), Positives = 247/388 (63%), Gaps = 36/388 (9%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICT 717
LHG M Q ERT VF+ F + GVL+CT
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCT 585
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EEDQKMVVFFSSCELVEFHYSLF 530
>gi|356558435|ref|XP_003547512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
17-like [Glycine max]
Length = 591
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/587 (35%), Positives = 312/587 (53%), Gaps = 71/587 (12%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+FA S+ G+ + + L E + T VQ +I IL G LV + TG+GKT+A
Sbjct: 21 VFASCSFSSL-GLESNLCEQLRERLGFEVPTLVQAQAIPVILSGRHALVNAATGTGKTVA 79
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y PII LQ +I R DG +A++++PTREL LQ EI KL F WIVP ++ GGE
Sbjct: 80 YLAPIIHHLQGYENRIQRSDGTFALVLVPTRELCLQVYEILQKLLHWFHWIVPGYIMGGE 139
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
EKAR+RKGISIL+ATPG LLDH K+T + +S + ++ DEADRIL G+ ++I E
Sbjct: 140 NRSKEKARLRKGISILIATPGSLLDHLKNTTSFLYSNLRWIIFDEADRILKLGFGKNIEE 199
Query: 566 FLEILKKQKP---------------QFQSILLSATLTPAVQRLAGMTLQNPIQI------ 604
L++L +K Q Q++LLS TL V LA M+L NP+ I
Sbjct: 200 ILDLLGSRKTGHDDKKNTVPTHSKMQRQNLLLSTTLNERVNHLAKMSLDNPVMIGLDGKK 259
Query: 605 --------------DAADSTDIHN----TTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
DS D + T +P L Q ++ P RL L S +
Sbjct: 260 NGTNFNIKRLDPSESDEDSEDKYYSKVPTVGDYKVPLQLIQRYMKVPCGSRLPVLLSIL- 318
Query: 647 GKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVL--------GENIAF-----FKLHG 692
+++ E E S K+++F +T D D+H LLS G F F+LHG
Sbjct: 319 ---KHLFEREPSQKVVLFFSTCDAVDFHYSLLSEFQFSSYSQTEGVQQVFLGCKTFRLHG 375
Query: 693 SMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTA 752
+M Q +R F+ F++ KS +L+ TDV+ARGLD P V +I+QY +P +T+YVHRVGRTA
Sbjct: 376 NMQQEDRRTSFQAFKTEKSALLLSTDVSARGLDFPKVRFIIQYDSPGEATEYVHRVGRTA 435
Query: 753 RVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVE 812
R+G G SL+FL P E+ +++L+ + + E + L N K S + +
Sbjct: 436 RLGERGESLVFLQPVEIDYLQDLEKHGVSLTEYPVLKVLDNFPLQKNHTKKSVFLESH-- 493
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
LQ + E+ ++ + + + K + SWVR Y ++ +L+ +F K++HLGH AKSF
Sbjct: 494 PWVLCLQKALEAFIMSKPEMDELSRKAFCSWVRAYTAHRGELKRVFMIKKLHLGHVAKSF 553
Query: 873 ALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLS 919
AL+ PS+ +G+ K+ I K K F+++ SKK+ ++
Sbjct: 554 ALKQPPSL---VGQSFQKQ--------IEKRKIFEKKNGLSKKRKVA 589
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 171/344 (49%), Gaps = 65/344 (18%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I IL G LV + TG+GKT+AY PII LQ +I R DG +A++++PT
Sbjct: 50 TLVQAQAIPVILSGRHALVNAATGTGKTVAYLAPIIHHLQGYENRIQRSDGTFALVLVPT 109
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL LQ EI KL F WIVP ++ GGE EKAR+RKGISIL+ATPG LLDH K+T
Sbjct: 110 RELCLQVYEILQKLLHWFHWIVPGYIMGGENRSKEKARLRKGISILIATPGSLLDHLKNT 169
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP---------------QFQSI 171
+ +S + ++ DEADRIL G+ ++I E L++L +K Q Q++
Sbjct: 170 TSFLYSNLRWIIFDEADRILKLGFGKNIEEILDLLGSRKTGHDDKKNTVPTHSKMQRQNL 229
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LLS TL +V HL D + G + KK F
Sbjct: 230 LLSTTLN--------------ERVNHLAKMSLDNPVMIGLDG---------KKNGTNFN- 265
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHN----TTDSLVIPDSLKQHFIVTPPK 287
++RL +P + D DS D + T +P L Q ++ P
Sbjct: 266 ----------IKRL------DPSESD-EDSEDKYYSKVPTVGDYKVPLQLIQRYMKVPCG 308
Query: 288 LRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
RL L S + +++ E E S K+++F +T D D+H LLS
Sbjct: 309 SRLPVLLSIL----KHLFEREPSQKVVLFFSTCDAVDFHYSLLS 348
>gi|406606181|emb|CCH42436.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 712
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 323/591 (54%), Gaps = 76/591 (12%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAP----TSYEEFPGIHPFMKKNLNEGMNITQVT 416
+SSLF +NP++ + V E AP TS+ G++ + +L E +++ T
Sbjct: 119 VSSLFTSNPELTKRDYNQEMEVHEPSNAPLADATSFNGL-GLNEILNNHLTEHLSLKNPT 177
Query: 417 TVQQLSIQPIL--DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+Q+ S+ P L D+ V++QTGSGKTLA+ +PI QKL E++ ++R GI+A+I+ P
Sbjct: 178 KIQR-SVLPRLLTRERDLFVQAQTGSGKTLAFVLPIFQKLMEIK-DLNRTTGIFALILAP 235
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA Q + L + IVP + GGEK KSEKAR+RKG++ILVATPGRL DH +H
Sbjct: 236 TRELATQIYSVIETLTRCCHRIVPGIVIGGEKKKSEKARLRKGVNILVATPGRLADHIEH 295
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------------PQFQ-SIL 581
TE L S + ++VLDE D++++ G+E I + L ++K P + ++L
Sbjct: 296 TERLDLSNIRYVVLDEGDKLMELGFEETITQILTDIEKTSRINATIRLYPTLPHKRINVL 355
Query: 582 LSATLTPAVQRLAGMTLQNPIQID---AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 638
SAT+ V++L ++L + ++ D+ D+ +++ PD L Q V PPKLRL
Sbjct: 356 CSATIKGNVKKLGEISLSDAEMVNNNSVPDADDLE-MAENVAAPDQLLQQVCVVPPKLRL 414
Query: 639 VALASFILGKCQNVNEDEE--SKMLVFMATQDMADYH----------------------- 673
V+LA+ + +N+ + S+ ++F++ D D+H
Sbjct: 415 VSLAAIL----KNITSIKTIGSRTMIFLSCSDSVDFHFSIFAKDGKIFNKVSKEYEDPRD 470
Query: 674 ---TELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV---KSGVLICTDVAARGLDLP 727
T L S +LGEN +KLHGS+SQ RT F + +L CTDVA+RGLDLP
Sbjct: 471 SQSTVLTSPLLGENTFVYKLHGSLSQQTRTATLSAFSKAPEDQHTILFCTDVASRGLDLP 530
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIR-IEEIK 786
+ +++Y P ++ D++HR+GRTAR G G S LFL+P+E K +E +++ ++
Sbjct: 531 YISTVIEYDPPFATEDHLHRIGRTARAGKSGKSFLFLLPTEEKYLELIEHYHPNGVKHRS 590
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
+D L VK + D AT ++ E +L+ + H A KG+TS +R
Sbjct: 591 YEDLLTTGFGVKWDFD------------ATTWHLNIERWLLEDETTHEKAVKGFTSHIRA 638
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
YA++ + IFN K +HLGH AKSF LR+ P + GK N E K KK
Sbjct: 639 YATHISLEKSIFNLKSLHLGHLAKSFGLRETPKKLG--GKTSNNEVGKRKK 687
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 177/339 (52%), Gaps = 64/339 (18%)
Query: 22 DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC 81
D+ V++QTGSGKTLA+ +PI QKL E++ ++R GI+A+I+ PTRELA Q + L
Sbjct: 193 DLFVQAQTGSGKTLAFVLPIFQKLMEIK-DLNRTTGIFALILAPTRELATQIYSVIETLT 251
Query: 82 KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDE 141
+ IVP + GGEK KSEKAR+RKG++ILVATPGRL DH +HTE L S + ++VLDE
Sbjct: 252 RCCHRIVPGIVIGGEKKKSEKARLRKGVNILVATPGRLADHIEHTERLDLSNIRYVVLDE 311
Query: 142 ADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLD 201
D++++ G+E I + L ++K +I L TL
Sbjct: 312 GDKLMELGFEETITQILTDIEKTSRINATIRLYPTL------------------------ 347
Query: 202 EADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID---A 258
RI +VL SAT+ V++L ++L + ++
Sbjct: 348 PHKRI------------------------NVLCSATIKGNVKKLGEISLSDAEMVNNNSV 383
Query: 259 ADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE--SKMLVFM 316
D+ D+ +++ PD L Q V PPKLRLV+LA+ + +N+ + S+ ++F+
Sbjct: 384 PDADDLE-MAENVAAPDQLLQQVCVVPPKLRLVSLAAIL----KNITSIKTIGSRTMIFL 438
Query: 317 ATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEIPKKTE 355
+ D D+H + + KI +N YE P+ ++
Sbjct: 439 SCSDSVDFHFSIFAKDGKI-----FNKVSKEYEDPRDSQ 472
>gi|114627330|ref|XP_001168459.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 1 [Pan
troglodytes]
Length = 585
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/388 (47%), Positives = 247/388 (63%), Gaps = 36/388 (9%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICT 717
LHG M Q ERT VF+ F + GVL+CT
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCT 585
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 193/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|328773820|gb|EGF83857.1| hypothetical protein BATDEDRAFT_1166, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 570
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 302/563 (53%), Gaps = 89/563 (15%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILD--GGDVLVRSQTGSGKTLAYAIPIIQKL 454
GI P + +L++ + T +Q+ SI +LD D ++++QTGSGKTLA+ +PI+ L
Sbjct: 16 GIDPLLSLHLSKKFEFEKPTLIQKASIPVLLDPTHNDAIIQAQTGSGKTLAFLLPILHSL 75
Query: 455 ------QEMRPK----ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFT------WIVP 498
Q P SR G +A+I+ PTRELA Q E+ L K WIV
Sbjct: 76 IRSAARQSTHPTTQHMFSRTAGTFAIILAPTRELAHQISEVLDSLLKYSLQMHYRHWIVS 135
Query: 499 SWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQG 558
S + GGEK KSEKAR+RKG++ILV TPGRLLDH + T++ S + L+LDEAD +L G
Sbjct: 136 SIVVGGEKRKSEKARLRKGVNILVCTPGRLLDHLRTTDSFDVSNLRWLILDEADNLLHLG 195
Query: 559 YERDIAEFLEILKKQK------------PQF----QSILLSATLTPAVQRLAGMTLQNPI 602
+E + + L+IL ++ P + Q++L SAT+ V+RLA L P
Sbjct: 196 FEETLRDILKILDTKRDVGLYNQTRVHVPGWPRGRQTVLCSATIEAGVKRLAEYALVKPN 255
Query: 603 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 662
I A D T D+ IP LKQ +++TPPKLRLV L + + N SK++V
Sbjct: 256 FIRVAAVAD---TNDAATIPKQLKQSYVLTPPKLRLVTLIALLRKITSTPN---ASKVVV 309
Query: 663 FMATQDMADYHTE------------------------------------LLSTVLGENIA 686
FMAT D D+H + + T L N+
Sbjct: 310 FMATGDSVDFHFDSFIHALDSNDTGAGIDLDAEDEDDKTTYDAVKLKAGVQPTNLFPNVR 369
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKS---GVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
FKLHGSM + R + F + + +L+CTDVAARGLDLP V IVQY P D
Sbjct: 370 LFKLHGSMPHAHRQATYTGFCAQSNEDKSILLCTDVAARGLDLPDVAHIVQYDPPGEVRD 429
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
Y+HR+GRTAR+G +G++ LFL+PSE+ +E L++ + + + L+ L K G L
Sbjct: 430 YIHRIGRTARLGRQGAATLFLMPSELLYLETLKSAGCDL--VPTNNLLEFLPQCKFGGVL 487
Query: 804 SRL---ADG-----NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
A+G E AAT L M+FE ++ + +A K YTS +R YA+++ R
Sbjct: 488 ESYTTHANGKPKRKTFEVAATDLHMAFERHIMASPSSNKAAQKAYTSQIRAYATHTVAER 547
Query: 856 HIFNFKQIHLGHFAKSFALRDAP 878
HIF+ K +HLGH+AKSFALR+AP
Sbjct: 548 HIFHIKNLHLGHWAKSFALREAP 570
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 169/337 (50%), Gaps = 69/337 (20%)
Query: 7 TTVQQLSIQPILD--GGDVLVRSQTGSGKTLAYAIPIIQKL------QEMRPK----ISR 54
T +Q+ SI +LD D ++++QTGSGKTLA+ +PI+ L Q P SR
Sbjct: 35 TLIQKASIPVLLDPTHNDAIIQAQTGSGKTLAFLLPILHSLIRSAARQSTHPTTQHMFSR 94
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFT------WIVPSWLTGGEKMKSEKARIRKG 108
G +A+I+ PTRELA Q E+ L K WIV S + GGEK KSEKAR+RKG
Sbjct: 95 TAGTFAIILAPTRELAHQISEVLDSLLKYSLQMHYRHWIVSSIVVGGEKRKSEKARLRKG 154
Query: 109 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 168
++ILV TPGRLLDH + T++ S + L+LDEAD +L G+E + + L+IL ++
Sbjct: 155 VNILVCTPGRLLDHLRTTDSFDVSNLRWLILDEADNLLHLGFEETLRDILKILDTKRD-- 212
Query: 169 QSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
+ L R+ G+ R
Sbjct: 213 -----------------------------VGLYNQTRVHVPGWPRG-------------- 229
Query: 229 FQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 288
Q+VL SAT+ V+RLA L P I A D T D+ IP LKQ +++TPPKL
Sbjct: 230 RQTVLCSATIEAGVKRLAEYALVKPNFIRVAAVAD---TNDAATIPKQLKQSYVLTPPKL 286
Query: 289 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYH 325
RLV L + + N SK++VFMAT D D+H
Sbjct: 287 RLVTLIALLRKITSTPN---ASKVVVFMATGDSVDFH 320
>gi|426363396|ref|XP_004048826.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 4
[Gorilla gorilla gorilla]
Length = 585
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/388 (47%), Positives = 247/388 (63%), Gaps = 36/388 (9%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTTD----------------SLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N D S IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELGSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICT 717
LHG M Q ERT VF+ F + GVL+CT
Sbjct: 558 LHGGMEQQERTAVFQEFSHSRRGVLLCT 585
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D S IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LGSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|242087993|ref|XP_002439829.1| hypothetical protein SORBIDRAFT_09g020890 [Sorghum bicolor]
gi|241945114|gb|EES18259.1| hypothetical protein SORBIDRAFT_09g020890 [Sorghum bicolor]
Length = 600
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/555 (35%), Positives = 304/555 (54%), Gaps = 63/555 (11%)
Query: 386 LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
LFA S+ + G+HP + +L + M+ T +Q +I + G +LV++ TG+GKTLA
Sbjct: 22 LFASCSFADL-GLHPTLCAHLQDKMSFEAPTRIQAQAIPVAISGQHMLVKAATGTGKTLA 80
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
Y PI+ LQ P++ R G +A++++PTREL LQ I +L F WIVP ++ GGE
Sbjct: 81 YLAPIVHLLQMREPRVDRTHGTFALVLVPTRELCLQVYGIAQQLVHRFHWIVPGYIMGGE 140
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
EKAR+RKGISIL+ATPGRLLDH +HT + +S ++ +V DEAD IL+ G+ + + +
Sbjct: 141 NRAKEKARLRKGISILIATPGRLLDHLQHTASFVYSNLQWIVFDEADSILELGFGKAVED 200
Query: 566 FLEIL------------KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD----- 608
LE L K + + Q++LLSATL V RLA ++L+NP+ I D
Sbjct: 201 ILEHLGSRNGAPGQIKSKGEHIRRQNLLLSATLNEKVNRLAKISLRNPVMIGLDDQNKPS 260
Query: 609 --STDIHNTTDSLV------------------------IPDSLKQHFIVTPPKLRLVALA 642
S ++ N SL+ +P L Q ++ RLV L
Sbjct: 261 GKSNNVGNNHTSLLSDDEEDEMMGKQNDLVEHAVDDFKLPAQLVQRYVKVSCGSRLVVLL 320
Query: 643 SFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE--------------NIAF 687
+ + +++ E + S K++VF +T D D+H +LS + +
Sbjct: 321 TIL----KSLFERQVSQKVVVFFSTCDSVDFHHTVLSQLKWSSDPHLDIDKKQNFLSCKV 376
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
F+LHG+M Q +R + F F S KS +L+ TD+AARGLD P V +I+QY +P +++YVHR
Sbjct: 377 FRLHGNMEQDDRKKSFLGFGSEKSAILVSTDIAARGLDFPKVKYIIQYDSPGEASEYVHR 436
Query: 748 VGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
VGRTAR+G +G +LLFL P E+ +++L+ + + E + L + + +L
Sbjct: 437 VGRTARIGEKGEALLFLQPIELDYLKDLELHGVSLTEYPFQRVLDSFPVNGQKPHKRKLI 496
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
++ +LQ S E+ V + A + SWVR Y ++ +L+ IF K++HLGH
Sbjct: 497 SLDMHPWIMSLQRSLEAFVAAEDATKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGH 556
Query: 868 FAKSFALRDAPSVIS 882
A+SF L++ PS++
Sbjct: 557 VARSFGLKEQPSLVG 571
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 187/380 (49%), Gaps = 55/380 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+ T +Q +I + G +LV++ TG+GKTLAY PI+ LQ P++ R G +A
Sbjct: 45 MSFEAPTRIQAQAIPVAISGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVDRTHGTFA 104
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ I +L F WIVP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 105 LVLVPTRELCLQVYGIAQQLVHRFHWIVPGYIMGGENRAKEKARLRKGISILIATPGRLL 164
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL------------KKQKPQF 168
DH +HT + +S ++ +V DEAD IL+ G+ + + + LE L K + +
Sbjct: 165 DHLQHTASFVYSNLQWIVFDEADSILELGFGKAVEDILEHLGSRNGAPGQIKSKGEHIRR 224
Query: 169 QSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
Q++LLSATL K K S +++ D+ G ++
Sbjct: 225 QNLLLSATLNE-----KVNRLAKISLRNPVMIGLDDQNKPSGKSNNVG-----------N 268
Query: 229 FQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 288
+ LLS + M QN + + + D +P L Q ++
Sbjct: 269 NHTSLLSDDEEDEM-----MGKQNDL---------VEHAVDDFKLPAQLVQRYVKVSCGS 314
Query: 289 RLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDN 347
RLV L + + +++ E + S K++VF +T D D+H +LS K ++ DP +
Sbjct: 315 RLVVLLTIL----KSLFERQVSQKVVVFFSTCDSVDFHHTVLSQLK-------WSSDP-H 362
Query: 348 YEIPKKTEVKSGPISSLFQN 367
+I KK S + L N
Sbjct: 363 LDIDKKQNFLSCKVFRLHGN 382
>gi|14042194|dbj|BAB55146.1| unnamed protein product [Homo sapiens]
Length = 585
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/388 (47%), Positives = 246/388 (63%), Gaps = 36/388 (9%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICT 717
LHG Q ERT VF+ F + GVL+CT
Sbjct: 558 LHGGKEQEERTAVFQEFSHSRRGVLLCT 585
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EEDQKMVVFFSSCELVEFHYSLF 530
>gi|332255429|ref|XP_003276834.1| PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform 3
[Nomascus leucogenys]
Length = 585
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/388 (46%), Positives = 247/388 (63%), Gaps = 36/388 (9%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAAD-STDIHNTT----------------DSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D S D N DS IP+SL+QH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDELDSFAIPESLEQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +++ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EKDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASTRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICT 717
LHGSM Q ERT VF+ F + GVL+CT
Sbjct: 558 LHGSMEQEERTAVFQEFSRSRRGVLLCT 585
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 192/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K F WIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFMWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA------------------------ 459
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+Q A D DS IP+SL+QH V P KLRLV LA+FIL K
Sbjct: 460 ---------VQEVCPPPAGDE------LDSFAIPESLEQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +++ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EKDQKMVVFFSSCELVEFHYSLF 530
>gi|297603690|ref|NP_001054440.2| Os05g0110500 [Oryza sativa Japonica Group]
gi|143361335|sp|Q0DLB9.2|RH17_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 17
gi|222629939|gb|EEE62071.1| hypothetical protein OsJ_16855 [Oryza sativa Japonica Group]
gi|255675949|dbj|BAF16354.2| Os05g0110500 [Oryza sativa Japonica Group]
Length = 591
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 298/551 (54%), Gaps = 57/551 (10%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
E LFA S+ + G+HP + +L + M T +Q +I + G +LV++ TG+GKT
Sbjct: 17 EGLFASCSFTDL-GLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKT 75
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LAY PI+ LQ P++ R DG +A++++PTREL LQ I +L F W+VP ++ G
Sbjct: 76 LAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMG 135
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
GE EKAR+RKGISIL+ATPGRLLDH +HT + + + +V DEAD IL+ G+ + +
Sbjct: 136 GENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKAL 195
Query: 564 AEFLEIL-----------KKQKP-QFQSILLSATLTPAVQRLAGMTLQNPIQI------- 604
+ LE L K +P + Q++LLSATL V RLA ++L+NP+ I
Sbjct: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
Query: 605 -------------DAADSTDIHNTT-----DSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
D + + HN T D +P L Q ++ RL L + +
Sbjct: 256 SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTIL- 314
Query: 647 GKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE--------------NIAFFKLH 691
+++ E + S K++VF++T D D+H +LS + + F+LH
Sbjct: 315 ---KSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLH 371
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G+M Q +R + F F S KS +L+ TDVAARGLD P V I+QY +P +++YVHRVGRT
Sbjct: 372 GNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRT 431
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR+G +G +LLFL P E + +L+ + E L+ L + + ++
Sbjct: 432 ARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDM 491
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+LQ + ES V + A + SWVR Y ++ +L+ IF K++HLGH A+S
Sbjct: 492 HPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARS 551
Query: 872 FALRDAPSVIS 882
F L++ PS++
Sbjct: 552 FGLKEQPSLLG 562
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +Q +I + G +LV++ TG+GKTLAY PI+ LQ P++ R DG +A
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFA 101
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ I +L F W+VP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 102 LVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLL 161
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-----------KKQKP-QF 168
DH +HT + + + +V DEAD IL+ G+ + + + LE L K +P +
Sbjct: 162 DHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKR 221
Query: 169 QSILLSATLT 178
Q++LLSATL
Sbjct: 222 QNLLLSATLN 231
>gi|218195957|gb|EEC78384.1| hypothetical protein OsI_18162 [Oryza sativa Indica Group]
Length = 591
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 298/551 (54%), Gaps = 57/551 (10%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
E LFA S+ + G+HP + +L + M T +Q +I + G +LV++ TG+GKT
Sbjct: 17 EGLFASCSFTDL-GLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKT 75
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LAY PI+ LQ P++ R DG +A++++PTREL LQ I +L F W+VP ++ G
Sbjct: 76 LAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMG 135
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
GE EKAR+RKGISIL+ATPGRLLDH +HT + + + +V DEAD IL+ G+ + +
Sbjct: 136 GENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKAL 195
Query: 564 AEFLEIL-----------KKQKP-QFQSILLSATLTPAVQRLAGMTLQNPIQI------- 604
+ LE L K +P + Q++LLSATL V RLA ++L+NP+ I
Sbjct: 196 EDILEHLGSRNDASNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
Query: 605 -------------DAADSTDIHNTT-----DSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
D + + HN T D +P L Q ++ RL L + +
Sbjct: 256 SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTIL- 314
Query: 647 GKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE--------------NIAFFKLH 691
+++ E + S K++VF++T D D+H +LS + + F+LH
Sbjct: 315 ---KSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLH 371
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G+M Q +R + F F S KS +L+ TDVAARGLD P V I+QY +P +++YVHRVGRT
Sbjct: 372 GNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRT 431
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR+G +G +LLFL P E + +L+ + E L+ L + + ++
Sbjct: 432 ARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDM 491
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+LQ + ES V + A + SWVR Y ++ +L+ IF K++HLGH A+S
Sbjct: 492 HPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARS 551
Query: 872 FALRDAPSVIS 882
F L++ PS++
Sbjct: 552 FGLKEQPSLLG 562
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +Q +I + G +LV++ TG+GKTLAY PI+ LQ P++ R DG +A
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFA 101
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ I +L F W+VP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 102 LVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLL 161
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-----------KKQKP-QF 168
DH +HT + + + +V DEAD IL+ G+ + + + LE L K +P +
Sbjct: 162 DHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDASNQNKNKMEPMKR 221
Query: 169 QSILLSATLT 178
Q++LLSATL
Sbjct: 222 QNLLLSATLN 231
>gi|449446634|ref|XP_004141076.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 17-like [Cucumis
sativus]
Length = 596
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 304/588 (51%), Gaps = 62/588 (10%)
Query: 373 NVPTRRLKPVSEA-LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGD 431
V T K V E +FA ++ G+ + L + M T VQ +I IL
Sbjct: 11 GVKTTTKKMVKEGEVFASCTFASL-GLDSTLCDQLRDKMGFEVPTLVQAQAIPAILSRRH 69
Query: 432 VLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCK 491
VLV + TG+GKT+AY +PII LQ+ + R DG +A++++PTREL +Q E KL +
Sbjct: 70 VLVNAATGTGKTVAYLVPIIHHLQKSARRTQRADGTFALVLVPTRELCMQVYESLQKLLQ 129
Query: 492 SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEA 551
+ WIVP ++TGGE EKAR+RKGISILVATPGRLLDH K+T + +S + +V DEA
Sbjct: 130 RYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYSNLHWIVFDEA 189
Query: 552 DRILDQGYERDIAEFLEILKKQK---------------PQFQSILLSATLTPAVQRLAGM 596
DRI + G +++ E L+ L +K PQ Q++L SATL V A +
Sbjct: 190 DRIFELGCGKEVEEILDHLGSRKNIHVNKDNAISSFGFPQ-QNLLFSATLNEKVTHFAKI 248
Query: 597 TLQNPIQI--DAADST--------------DIHNTTDSL-----------VIPDSLKQHF 629
+L+NPI I DA +S DI++ + IP L Q +
Sbjct: 249 SLENPIMIGLDAGNSALEFQPTERGRFLEHDINDEVHPIQKENNFSIADYKIPSQLVQSY 308
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEE-SKMLVFMATQDMADYHTELLSTV-------- 680
+ P RL L S + + + E E K+LV +T D D+H L
Sbjct: 309 VQAPCGSRLTVLFSVL----KYLFERESFEKILVLFSTCDAVDFHYSLFGGFKFSSESES 364
Query: 681 ----LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
L F+LHGSM +R F+ F++ K +L+ TD+AARGLD P V I+QY
Sbjct: 365 RPEHLFLKCKIFRLHGSMKPEDRRTTFQAFKTEKLALLLSTDIAARGLDFPKVRCIIQYD 424
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P + +YVHRVGRTAR+G G SLLFL P+E +++LQN + + E L L +
Sbjct: 425 PPGEAIEYVHRVGRTARLGERGDSLLFLQPTETDYLQDLQNHGVSLTEYPLVKVLDSFPV 484
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ + +L + LQ + ES + + + A K + SWVR Y ++ L+
Sbjct: 485 RGRKQFVEKLVSLESHSWIMFLQRAVESFIAAEPGMMKLAQKAFCSWVRAYTAHRGALKR 544
Query: 857 IFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEK 904
IF K++HLGH AKSFAL+ PSV+ K + K+ ++ K ++ K
Sbjct: 545 IFVVKKLHLGHVAKSFALKQQPSVVGKSFKKQVKKRKRDSKQDVSSSK 592
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 174/361 (48%), Gaps = 79/361 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ +I IL VLV + TG+GKT+AY +PII LQ+ + R DG +A
Sbjct: 48 MGFEVPTLVQAQAIPAILSRRHVLVNAATGTGKTVAYLVPIIHHLQKSARRTQRADGTFA 107
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL +Q E KL + + WIVP ++TGGE EKAR+RKGISILVATPGRLL
Sbjct: 108 LVLVPTRELCMQVYESLQKLLQRYHWIVPGYITGGESRSKEKARLRKGISILVATPGRLL 167
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K+T + +S + +V DEADRI + G +++ E L+ L +K
Sbjct: 168 DHLKNTSSFLYSNLHWIVFDEADRIFELGCGKEVEEILDHLGSRK--------------- 212
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
++ +++ + I G+ PQ Q++L SATL
Sbjct: 213 ----------------NIHVNKDNAISSFGF---------------PQ-QNLLFSATLNE 240
Query: 241 AVQRLAGMTLQNPIQI--DAADST--------------DIHNTTDSL-----------VI 273
V A ++L+NPI I DA +S DI++ + I
Sbjct: 241 KVTHFAKISLENPIMIGLDAGNSALEFQPTERGRFLEHDINDEVHPIQKENNFSIADYKI 300
Query: 274 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE-SKMLVFMATQDMADYHTELLSTK 332
P L Q ++ P RL L S + + + E E K+LV +T D D+H L
Sbjct: 301 PSQLVQSYVQAPCGSRLTVLFSVL----KYLFERESFEKILVLFSTCDAVDFHYSLFGGF 356
Query: 333 K 333
K
Sbjct: 357 K 357
>gi|322785859|gb|EFZ12478.1| hypothetical protein SINV_10006 [Solenopsis invicta]
Length = 936
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 178/391 (45%), Positives = 247/391 (63%), Gaps = 62/391 (15%)
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAA-DSTDIHNTTDS-----LVIPDSLKQHFIV 631
Q+ILLSATLT AV++LAG+T+ +PI +DAA ++ + DS L++P S+ Q++I
Sbjct: 568 QTILLSATLTHAVEKLAGLTMHDPIFVDAAKENVETSGGNDSEINEDLIVPQSVNQNYIA 627
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------- 683
TPPKLR+V L+++I G+CQ + K L+FMATQDM DY+TE+LS+VL +
Sbjct: 628 TPPKLRMVTLSAYIAGRCQTPGQ---HKTLIFMATQDMVDYYTEILSSVLTKPMDDDDED 684
Query: 684 -----NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
++ FFKLHG+M+Q ERTE+FKTF RGLD+P VD +VQYT P
Sbjct: 685 SDPLVDVEFFKLHGNMTQKERTEIFKTF--------------TRGLDMPKVDCVVQYTGP 730
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
S+ DYVHR+GRTAR G G++ +FL PSE++ V L++RRIRI+++ + D L LL
Sbjct: 731 ISARDYVHRIGRTARAGCSGTATIFLTPSEIEFVRMLESRRIRIKQLDMNDVLDKLL--- 787
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
G LS+ +V+ AA ALQ FE VL+ + L ACK Y SWVRFY+SY +D+R IF
Sbjct: 788 --GPLSK--HNSVQAAAVALQNDFEDLVLENRQLCAKACKAYVSWVRFYSSYPRDMREIF 843
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIGK---------PKNKEELKNKKM-AINKEKSFKQ 908
N K++HLGH+AKSFALRD P I GIGK P++ L K ++++K +
Sbjct: 844 NRKELHLGHYAKSFALRDPPQRIGGIGKKLREKEISRPRHDNRLSYKSSDGVSQKKQRTR 903
Query: 909 RGNFSKKQML--------SEFDSGL-PQRKP 930
G+ + +L SE+DSGL P +KP
Sbjct: 904 DGDGQRTGLLKRVRMLNTSEYDSGLEPPKKP 934
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 168/230 (73%), Gaps = 1/230 (0%)
Query: 342 NIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPF 401
N D + + PK G ISSLF NNPD+P + R +KPV E++F ++ + IHP+
Sbjct: 232 NNDKKSDKTPKLMHRTGGKISSLFGNNPDVPTMGQRFVKPVHESVFTEVTFADL-NIHPY 290
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
M NL + M IT++TTVQQ +I I DVL+RSQTGSGKTLAYA+PI++ L ++RP++
Sbjct: 291 MISNLEQNMGITKMTTVQQKAIPQIFSAKDVLIRSQTGSGKTLAYALPIVELLHKIRPQL 350
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
+R G+ A++I+PTRELALQT E F KL K FTWIVP ++ GGEK K+EKAR+RKG +IL
Sbjct: 351 NRNSGLSALVIVPTRELALQTYECFIKLVKPFTWIVPGYIIGGEKRKAEKARLRKGCNIL 410
Query: 522 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
V+TPGRLLDH KHT+ L+ + V++ VLDEADR+LD GYE DI+ + LK
Sbjct: 411 VSTPGRLLDHIKHTKALRLNDVKYFVLDEADRMLDMGYEMDISGIVSALK 460
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 129/162 (79%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M IT++TTVQQ +I I DVL+RSQTGSGKTLAYA+PI++ L ++RP+++R G+ A
Sbjct: 299 MGITKMTTVQQKAIPQIFSAKDVLIRSQTGSGKTLAYALPIVELLHKIRPQLNRNSGLSA 358
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTRELALQT E F KL K FTWIVP ++ GGEK K+EKAR+RKG +ILV+TPGRLL
Sbjct: 359 LVIVPTRELALQTYECFIKLVKPFTWIVPGYIIGGEKRKAEKARLRKGCNILVSTPGRLL 418
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 162
DH KHT+ L+ + V++ VLDEADR+LD GYE DI+ + LK
Sbjct: 419 DHIKHTKALRLNDVKYFVLDEADRMLDMGYEMDISGIVSALK 460
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 79/108 (73%), Gaps = 9/108 (8%)
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAA-DSTDIHNTTDS-----LVIPDSLKQHFIV 283
Q++LLSATLT AV++LAG+T+ +PI +DAA ++ + DS L++P S+ Q++I
Sbjct: 568 QTILLSATLTHAVEKLAGLTMHDPIFVDAAKENVETSGGNDSEINEDLIVPQSVNQNYIA 627
Query: 284 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
TPPKLR+V L+++I G+CQ + K L+FMATQDM DY+TE+LS+
Sbjct: 628 TPPKLRMVTLSAYIAGRCQTPG---QHKTLIFMATQDMVDYYTEILSS 672
>gi|255086145|ref|XP_002509039.1| predicted protein [Micromonas sp. RCC299]
gi|226524317|gb|ACO70297.1| predicted protein [Micromonas sp. RCC299]
Length = 513
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 288/525 (54%), Gaps = 50/525 (9%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T VQQ +I IL G DVL+R++TGSGKTLAY PI+ L + P+I+R+DG A++++PT
Sbjct: 1 TRVQQRAIPHILRGEDVLIRAETGSGKTLAYMCPILAALGGIVPRITREDGTRALVMVPT 60
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA Q L+ +L K + W+V + GGE + EKAR+RKG+S+LVATPGRLLDH +HT
Sbjct: 61 RELAAQVLDTAARLGKCYHWVVCGGVMGGENKQKEKARLRKGVSVLVATPGRLLDHLRHT 120
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK------QKPQFQSILLSATLTPA 589
+ + LVLDEADR+LD G+E D+ L L + ++ + LLSATLT
Sbjct: 121 TAFRADLLRWLVLDEADRMLDVGFEEDLNAILADLNRRTENAGERGTRCTALLSATLTAG 180
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
RLA + + +P+ I+ D L + D+ KQ + P +LR A+ + KC
Sbjct: 181 TSRLADLAMVDPVTIE----IDPEEPEYELALADA-KQMIVRMPEQLRHTAVE--VPAKC 233
Query: 650 QNVN---------EDEESKMLVFMATQDMADYHTELLS-------------------TVL 681
+ + K++VF+++ + ++H +LS V
Sbjct: 234 RLAALAGLLAGWMQGAVPKVMVFLSSCESVEFHYRVLSWLASGGKAKKGAKGPRGAGDVD 293
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
+ F+LHG +SQ++R V++ F +GVL+CTDV ARGLD V VQ PS
Sbjct: 294 AGGYSVFRLHGVLSQTDRRAVYQGFSKATAGVLLCTDVGARGLDFVGVGATVQVDPPSDP 353
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL----LSV 797
T YVHRVGRTAR+G EG ++LFL P EV+ L + + + L L
Sbjct: 354 TTYVHRVGRTARLGAEGEAVLFLQPREVEYATVLGDLGVNFCAASVPAMLDVLDGAAGGG 413
Query: 798 KMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
GD R + ++ AA LQ + V K L T A + S+VR YA++ D++HI
Sbjct: 414 GGGGDFER--NPHLHPAAQKLQRKLHAEVSGDKELLTLAKDAFRSYVRSYATFPSDMKHI 471
Query: 858 FNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINK 902
F+ K++HLGH A +F L++AP + IGK +E L+ K A K
Sbjct: 472 FHVKRLHLGHVASAFGLKEAPGL---IGKSATRERLQAAKDAKRK 513
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 121/181 (66%), Gaps = 6/181 (3%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQQ +I IL G DVL+R++TGSGKTLAY PI+ L + P+I+R+DG A++++PT
Sbjct: 1 TRVQQRAIPHILRGEDVLIRAETGSGKTLAYMCPILAALGGIVPRITREDGTRALVMVPT 60
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA Q L+ +L K + W+V + GGE + EKAR+RKG+S+LVATPGRLLDH +HT
Sbjct: 61 RELAAQVLDTAARLGKCYHWVVCGGVMGGENKQKEKARLRKGVSVLVATPGRLLDHLRHT 120
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK------QKPQFQSILLSATLTPA 180
+ + LVLDEADR+LD G+E D+ L L + ++ + LLSATLT
Sbjct: 121 TAFRADLLRWLVLDEADRMLDVGFEEDLNAILADLNRRTENAGERGTRCTALLSATLTAG 180
Query: 181 T 181
T
Sbjct: 181 T 181
>gi|293337217|ref|NP_001169005.1| uncharacterized protein LOC100382837 [Zea mays]
gi|223974397|gb|ACN31386.1| unknown [Zea mays]
Length = 599
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 298/556 (53%), Gaps = 62/556 (11%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
E LFA S+ + G+H + +L + M+ T +Q +I + G +LV++ TG+GKT
Sbjct: 20 EELFASCSFADL-GLHSTLCAHLQDKMSFQAPTRIQAQAIPVAISGQHMLVKAATGTGKT 78
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LAY PI+ LQ P++ R G +A++++PTREL LQ I +L F WIVP ++ G
Sbjct: 79 LAYLAPIVHVLQMREPRVDRTHGTFALVLVPTRELCLQVYGIAQQLVHRFHWIVPGYVMG 138
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
GE EKAR+RKGISIL+ATPGRLLDH + T + +S ++ +V DEAD IL+ G+ + +
Sbjct: 139 GENRAKEKARLRKGISILIATPGRLLDHLQRTASFSYSNLQWIVFDEADSILELGFGKAV 198
Query: 564 AEFLEIL------------KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD--- 608
+ LE L K + Q++LLSATL V RLA ++L+NP+ I D
Sbjct: 199 EDILEHLGSRNGATGQIKNKGGHIRRQNLLLSATLNEKVNRLAKISLKNPVMIGLDDQSK 258
Query: 609 ----STDIHNTTDSLV-----------------------IPDSLKQHFIVTPPKLRLVAL 641
S ++ N SL+ +P L Q ++ RL L
Sbjct: 259 PSGKSNNVGNNHTSLLSDEDDEILEKQNDLMEHAVDDFKLPTQLVQRYVKVSCGSRLAVL 318
Query: 642 ASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE--------------NIA 686
+ +++ E + S K++VF +T D D+H LS + +
Sbjct: 319 LMIL----KSLFERQVSQKVVVFFSTCDSVDFHHTALSQLEWSSGPQRDMDKKQKFLSCK 374
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
F+LHG+M Q +R + F F S KS +L+ TD+AARGLD P V +I+QY +P +++YVH
Sbjct: 375 VFRLHGNMEQDDRKKSFLGFGSEKSAILVSTDIAARGLDFPKVKYIIQYDSPGEASEYVH 434
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
RVGRTAR+G +G +LLF+ P E+ +++L+ + + E L+ L + + +
Sbjct: 435 RVGRTARIGEKGEALLFMQPIELDYLKDLELHGVSLTEYPLQRVLDSFPVNGQKPHKRKQ 494
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
++ +LQ S E V + A + SWVR Y ++ +L+ IF K++HLG
Sbjct: 495 ISLDMHPCIMSLQRSLEGFVAAEDATKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLG 554
Query: 867 HFAKSFALRDAPSVIS 882
H A+SF L++ PS++
Sbjct: 555 HVARSFGLKEQPSLVG 570
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 12/190 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+ T +Q +I + G +LV++ TG+GKTLAY PI+ LQ P++ R G +A
Sbjct: 45 MSFQAPTRIQAQAIPVAISGQHMLVKAATGTGKTLAYLAPIVHVLQMREPRVDRTHGTFA 104
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ I +L F WIVP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 105 LVLVPTRELCLQVYGIAQQLVHRFHWIVPGYVMGGENRAKEKARLRKGISILIATPGRLL 164
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL------------KKQKPQF 168
DH + T + +S ++ +V DEAD IL+ G+ + + + LE L K +
Sbjct: 165 DHLQRTASFSYSNLQWIVFDEADSILELGFGKAVEDILEHLGSRNGATGQIKNKGGHIRR 224
Query: 169 QSILLSATLT 178
Q++LLSATL
Sbjct: 225 QNLLLSATLN 234
>gi|50551407|ref|XP_503177.1| YALI0D23133p [Yarrowia lipolytica]
gi|74689563|sp|Q6C835.1|DBP7_YARLI RecName: Full=ATP-dependent RNA helicase DBP7
gi|49649045|emb|CAG81377.1| YALI0D23133p [Yarrowia lipolytica CLIB122]
Length = 799
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 321/560 (57%), Gaps = 59/560 (10%)
Query: 409 GMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
GM + + T +Q+ +I ++ D+ V++QTGSGKTLA+ +P+++++ +SR+ G+
Sbjct: 250 GMQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAFVLPVLERIMSC-DDVSRETGL 308
Query: 468 YAVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 526
+AVI+ PTREL Q + LC K+ WIVP + GGEK KSEKARIRKG++ILVATPG
Sbjct: 309 FAVILTPTRELTTQIYSVLETLCRKACPWIVPGIVIGGEKKKSEKARIRKGVNILVATPG 368
Query: 527 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL----------------EIL 570
RL DH +TE L S+V +VLDE DR+++ G+E I + L +I
Sbjct: 369 RLADHFDNTEALDLSQVRWVVLDEGDRLMELGFEETITKILRTIEWKSVLRGENYLKDIP 428
Query: 571 KKQKP---QFQSILLSATLTPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSL 625
K KP + ++L SAT+ V L TL++ + D+ + + ++ P L
Sbjct: 429 KNLKPLPSRRVTVLCSATMKGGVTELGKSTLKDADWVSNDSVEDALAETSVETFSAPSQL 488
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST------ 679
Q ++V P KLRLV L + G +E +K++VF++ D D+H ++LS
Sbjct: 489 VQEWVVVPAKLRLVTLLGALRGDILQSSEKTNTKVIVFLSCSDSVDFHFDVLSRDGSQIN 548
Query: 680 ---------VLGENI--AFFKLHGSMSQSERTEVFKTF-RSVKSGVLICTDVAARGLDLP 727
+L +++ + +KLHGS+SQ RT +F ++ +L+CTDVA+RGLDLP
Sbjct: 549 KMDTAKTAPLLLDDVSTSVYKLHGSLSQQARTATLASFAKNSTPSILLCTDVASRGLDLP 608
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP-SEVKLVEELQNRRIRIEEIK 786
+ +++Y P S D++HRVGRTAR G +G +LLFL+P +E VE+L+ +++K
Sbjct: 609 KITHVIEYDPPFSIEDHLHRVGRTARAGQDGRALLFLLPGAEEGYVEKLKQS----QQMK 664
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
K +N+L+ G + AAT + E VL + A +G+TS +R
Sbjct: 665 -KTTYENILAAGFGGK-------GWDFAATNYHLDVERWVLGDETALDRARRGFTSHIRA 716
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK-NKKMAINKEKS 905
YA++ + +FN + +HLGH AKSFALR+AP +GK K+ E++K NK ++++ ++
Sbjct: 717 YATHIAAEKDMFNVRMLHLGHLAKSFALREAP---GKLGKKKDPEKIKVNKDGSLDETQA 773
Query: 906 FKQRGNFSKKQMLSEFDSGL 925
K+ + S+K + + +S +
Sbjct: 774 RKKMLDRSRKHVYNSGESAM 793
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 181/334 (54%), Gaps = 47/334 (14%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 59
M + + T +Q+ +I ++ D+ V++QTGSGKTLA+ +P+++++ +SR+ G++
Sbjct: 251 MQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAFVLPVLERIMSC-DDVSRETGLF 309
Query: 60 AVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
AVI+ PTREL Q + LC K+ WIVP + GGEK KSEKARIRKG++ILVATPGR
Sbjct: 310 AVILTPTRELTTQIYSVLETLCRKACPWIVPGIVIGGEKKKSEKARIRKGVNILVATPGR 369
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L DH +TE L S+V +VLDE DR+++ G+E I + L + +++S+L
Sbjct: 370 LADHFDNTEALDLSQVRWVVLDEGDRLMELGFEETITKILRTI-----EWKSVLRG---- 420
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+ Y +DI + L+ L ++ +VL SAT+
Sbjct: 421 ------------------------------ENYLKDIPKNLKPLPSRR---VTVLCSATM 447
Query: 239 TPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
V L TL++ + D+ + + ++ P L Q ++V P KLRLV L
Sbjct: 448 KGGVTELGKSTLKDADWVSNDSVEDALAETSVETFSAPSQLVQEWVVVPAKLRLVTLLGA 507
Query: 297 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ G +E +K++VF++ D D+H ++LS
Sbjct: 508 LRGDILQSSEKTNTKVIVFLSCSDSVDFHFDVLS 541
>gi|14719335|gb|AAK73153.1|AC079022_26 putative ATP-dependent RNA helicase [Oryza sativa]
Length = 601
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 297/561 (52%), Gaps = 67/561 (11%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEG----------MNITQVTTVQQLSIQPILDGGDVL 433
E LFA S+ + G+HP + +L M T +Q +I + G +L
Sbjct: 17 EGLFASCSFTDL-GLHPTLCAHLQGSFSPSTSHGWLMGFQAPTRIQAQAIPVAMSGQHML 75
Query: 434 VRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSF 493
V++ TG+GKTLAY PI+ LQ P++ R DG +A++++PTREL LQ I +L F
Sbjct: 76 VKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRF 135
Query: 494 TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADR 553
W+VP ++ GGE EKAR+RKGISIL+ATPGRLLDH +HT + + + +V DEAD
Sbjct: 136 HWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADS 195
Query: 554 ILDQGYERDIAEFLEIL-----------KKQKP-QFQSILLSATLTPAVQRLAGMTLQNP 601
IL+ G+ + + + LE L K +P + Q++LLSATL V RLA ++L+NP
Sbjct: 196 ILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNP 255
Query: 602 IQI--------------------DAADSTDIHNTT-----DSLVIPDSLKQHFIVTPPKL 636
+ I D + + HN T D +P L Q ++
Sbjct: 256 VMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGS 315
Query: 637 RLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE------------ 683
RL L + + +++ E + S K++VF++T D D+H +LS +
Sbjct: 316 RLAILLTIL----KSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQK 371
Query: 684 --NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
+ F+LHG+M Q +R + F F S KS +L+ TDVAARGLD P V I+QY +P +
Sbjct: 372 FISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEA 431
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
++YVHRVGRTAR+G +G +LLFL P E + +L+ + E L+ L +
Sbjct: 432 SEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRL 491
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
+ ++ +LQ + ES V + A + SWVR Y ++ +L+ IF K
Sbjct: 492 HKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVK 551
Query: 862 QIHLGHFAKSFALRDAPSVIS 882
++HLGH A+SF L++ PS++
Sbjct: 552 KLHLGHVARSFGLKEQPSLLG 572
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +Q +I + G +LV++ TG+GKTLAY PI+ LQ P++ R DG +A
Sbjct: 52 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFA 111
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ I +L F W+VP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 112 LVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLL 171
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-----------KKQKP-QF 168
DH +HT + + + +V DEAD IL+ G+ + + + LE L K +P +
Sbjct: 172 DHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKR 231
Query: 169 QSILLSATLT 178
Q++LLSATL
Sbjct: 232 QNLLLSATLN 241
>gi|365983908|ref|XP_003668787.1| hypothetical protein NDAI_0B05110 [Naumovozyma dairenensis CBS 421]
gi|343767554|emb|CCD23544.1| hypothetical protein NDAI_0B05110 [Naumovozyma dairenensis CBS 421]
Length = 762
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 343/673 (50%), Gaps = 90/673 (13%)
Query: 307 DEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSLFQ 366
DE+SK +T + + + L T KK ++L +P T S +SSLF
Sbjct: 73 DEDSKSNKKRSTMNNNNSRNQTLMTNKKTRELDNKLASRKGGVLPPNT-ASSEIVSSLFT 131
Query: 367 NNPDIPNVPTR-------RLKPVSEALFAPTSYEEFP--GIHPFMKKNLNEGMNITQVTT 417
+N +I ++ P + AP+ + F GI+ + +L E M IT+ T
Sbjct: 132 SNREISTAVNTNKHDENIKINPSN----APSMEDSFDALGINDTLVSHLVEKMRITKPTN 187
Query: 418 VQQLSIQPILD----GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
+Q+L+I ++ D+ + +QTGSGKTL Y +PII + EM + RK G +A+I+
Sbjct: 188 IQKLAIPNLISSNKKNNDLFIHAQTGSGKTLTYLLPIISSILEMEAHVDRKSGCFALIVA 247
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA Q ++ + L ++VP L GGE+ KSEKAR+RKG + +V TPGR+LDH +
Sbjct: 248 PTRELASQIYQVASTLTNCCHYLVPCLLIGGERKKSEKARLRKGCNFIVGTPGRILDHLQ 307
Query: 534 HTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEIL------KKQKPQFQS----I 580
+T+ ++ + +LVLDE D++++ G+E+ I + L+I+ ++ P+ S +
Sbjct: 308 NTKVIREQMGDSLRYLVLDEGDKLMELGFEQTIDDILKIIHEVPINNRKFPKLPSRIINV 367
Query: 581 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 640
L SATL V +L + LQN I + T+ T V PD L Q + PPKLRLV
Sbjct: 368 LCSATLKGRVTKLGDVALQNYKLISVSGKTEKETVT---VAPDQLLQQITIVPPKLRLVT 424
Query: 641 LASFILGKCQNVNEDEE--SKMLVFMATQDMADYHTELLST-------VLGENIAF---- 687
LA+ + + E+ E ++ +VF++ D ++H E S+ ++G+ +
Sbjct: 425 LAAELNNMTKRAKENPEQTTRTMVFLSCSDSVEFHFETFSSNDSHHKDIVGDTVRLLTKG 484
Query: 688 -----------------FKLHGSMSQSERTEVFKTFRSVKSG------VLICTDVAARGL 724
+KLHGS+SQ RT+ K F + ++ CTDVA+RGL
Sbjct: 485 NTIFPCFDPAETPKVLCYKLHGSLSQQMRTQTLKHFATDNDATKGKHLIMFCTDVASRGL 544
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE-------VKLVEELQN 777
DLP V +++ P ++ D++HR+GRTAR G G SLLFL+P E +K L
Sbjct: 545 DLPYVSTVIEVDPPFAAEDHLHRIGRTARAGKPGESLLFLLPGEEEGYMDYIKPYHPLGW 604
Query: 778 RRIRIEEIKLKDCLQNLLSVKME---GDLSRLADGNV-------ETAATALQMSFESAVL 827
+ ++ +E LK +L + + D R + +T AT ++ E +L
Sbjct: 605 QLLKFDEDILKSAFSDLRVARNDITAKDAQRKKSKDKTEKILEWDTNATTWHLNVERRLL 664
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ A +GYTS VR YA++ + FN + +HLGH AKSF LR+ P + +G
Sbjct: 665 EDSTYKNVAMRGYTSHVRAYATHITQEKKFFNVRCLHLGHLAKSFGLRERPKSMGALGSK 724
Query: 888 KNKEE---LKNKK 897
+ K E KNKK
Sbjct: 725 QQKMEDDAFKNKK 737
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 122/194 (62%), Gaps = 17/194 (8%)
Query: 1 MNITQVTTVQQLSIQPILD----GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 56
M IT+ T +Q+L+I ++ D+ + +QTGSGKTL Y +PII + EM + RK
Sbjct: 180 MRITKPTNIQKLAIPNLISSNKKNNDLFIHAQTGSGKTLTYLLPIISSILEMEAHVDRKS 239
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G +A+I+ PTRELA Q ++ + L ++VP L GGE+ KSEKAR+RKG + +V TP
Sbjct: 240 GCFALIVAPTRELASQIYQVASTLTNCCHYLVPCLLIGGERKKSEKARLRKGCNFIVGTP 299
Query: 117 GRLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEIL------KKQKPQ 167
GR+LDH ++T+ ++ + +LVLDE D++++ G+E+ I + L+I+ ++ P+
Sbjct: 300 GRILDHLQNTKVIREQMGDSLRYLVLDEGDKLMELGFEQTIDDILKIIHEVPINNRKFPK 359
Query: 168 FQS----ILLSATL 177
S +L SATL
Sbjct: 360 LPSRIINVLCSATL 373
>gi|254572652|ref|XP_002493435.1| Putative ATP-dependent RNA helicase of the DEAD-box family involved
in ribosomal biogenesis [Komagataella pastoris GS115]
gi|238033234|emb|CAY71256.1| Putative ATP-dependent RNA helicase of the DEAD-box family involved
in ribosomal biogenesis [Komagataella pastoris GS115]
gi|328354740|emb|CCA41137.1| hypothetical protein PP7435_Chr4-0987 [Komagataella pastoris CBS
7435]
Length = 696
Score = 322 bits (824), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 203/581 (34%), Positives = 315/581 (54%), Gaps = 72/581 (12%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAP----TSYEEFPGIHPFMKKNLNEGMNITQVT 416
+SSLF +NP++ T+ V + AP T+++ G + + K+L E + T
Sbjct: 98 VSSLFTSNPEVQEHETKEEAVVQDPSNAPLSDATTFDGL-GCNDILYKHLTEHIKFQHPT 156
Query: 417 TVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
+Q+ I +L D+ V++QTGSGKTLA+ IPI+QKL E+ + R G++A+I+ PT
Sbjct: 157 KIQRSVIPRLLTRERDLFVQAQTGSGKTLAFCIPIVQKLMEIE-DLKRDSGLFAIILTPT 215
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA Q + L + IVP + GGEK KSEKAR+RKG++ILV TPGRLLDH ++T
Sbjct: 216 RELATQIYSVLETLTRCCHRIVPGIVIGGEKKKSEKARLRKGVNILVGTPGRLLDHMENT 275
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK----------PQFQ-SILLSA 584
ETL S V +L++DE D++++ G+E + + L++L ++ P + ++L SA
Sbjct: 276 ETLDLSSVSYLIMDEGDKLMELGFEETLDKILKLLGERSTIANRKYSNLPSTRINVLCSA 335
Query: 585 TLTPAVQRLAGMTLQNPIQIDAADSTD---IHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 641
T+ V +L ++L++ + D I + +++ PD L Q ++ PPKLRLV L
Sbjct: 336 TMKGGVSKLGEISLKDAELVTTNSVPDQDVIFDEENNIQAPDQLIQQILIVPPKLRLVTL 395
Query: 642 ASFILGKCQNVNEDEESKMLVFMATQDMADYH---------------------------- 673
S + + ++ S+ ++F++ D D+H
Sbjct: 396 HSLLK---KITSKPGGSRTMLFLSCSDSVDFHFSTFTRKGRKINSKKVLKETGVEISDER 452
Query: 674 -----TELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV---KSGVLICTDVAARGLD 725
T L +LG+N+ FKLHGS++Q RT F S + +L CTDVA+RGLD
Sbjct: 453 ADESSTILTVPILGDNVVAFKLHGSLTQQVRTSTLDMFSSTPESRHTILFCTDVASRGLD 512
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEI 785
LP + +++Y P + D++HRVGRTAR G G+S+LFL P +EE +I EI
Sbjct: 513 LPYISDVIEYDPPFAVEDHLHRVGRTARAGKGGTSVLFLFPG----IEETYTGKI---EI 565
Query: 786 KLKDCLQNLLSVKMEGDLSRLADGNV-ETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
K + +S DL + + G E AT + E +L+ H++A + +TS +
Sbjct: 566 YHKKAGLDYVSFS---DLLKTSFGKTWEVDATTWHLDVERWLLEDPGAHSAAAQAFTSHI 622
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
R YA++ R FN K +HLGH AKSF LR+ P + G+G
Sbjct: 623 RAYATHLSSERDTFNVKTLHLGHLAKSFGLRETPKTL-GVG 662
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 174/344 (50%), Gaps = 55/344 (15%)
Query: 22 DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC 81
D+ V++QTGSGKTLA+ IPI+QKL E+ + R G++A+I+ PTRELA Q + L
Sbjct: 172 DLFVQAQTGSGKTLAFCIPIVQKLMEIE-DLKRDSGLFAIILTPTRELATQIYSVLETLT 230
Query: 82 KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDE 141
+ IVP + GGEK KSEKAR+RKG++ILV TPGRLLDH ++TETL S V +L++DE
Sbjct: 231 RCCHRIVPGIVIGGEKKKSEKARLRKGVNILVGTPGRLLDHMENTETLDLSSVSYLIMDE 290
Query: 142 ADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLD 201
D++++ G+E + + L++L ++ + T C T SK+ + L
Sbjct: 291 GDKLMELGFEETLDKILKLLGERSTIANRKYSNLPSTRINVLCSATMKGGVSKLGEISLK 350
Query: 202 EADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADS 261
+A+ L++ P D
Sbjct: 351 DAE----------------------------LVTTNSVP-------------------DQ 363
Query: 262 TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDM 321
I + +++ PD L Q ++ PPKLRLV L S + + ++ S+ ++F++ D
Sbjct: 364 DVIFDEENNIQAPDQLIQQILIVPPKLRLVTLHSLLK---KITSKPGGSRTMLFLSCSDS 420
Query: 322 ADYHTELLSTK-KKI---KKLKEYNIDPDNYEIPKKTEVKSGPI 361
D+H + K +KI K LKE ++ + + + + + PI
Sbjct: 421 VDFHFSTFTRKGRKINSKKVLKETGVEISDERADESSTILTVPI 464
>gi|241957213|ref|XP_002421326.1| DEAD-box family ATP-dependent RNA helicase, ribosomal biogenesis,
putative [Candida dubliniensis CD36]
gi|223644670|emb|CAX40660.1| DEAD-box family ATP-dependent RNA helicase, ribosomal biogenesis,
putative [Candida dubliniensis CD36]
Length = 729
Score = 322 bits (824), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 216/635 (34%), Positives = 336/635 (52%), Gaps = 79/635 (12%)
Query: 361 ISSLFQNN-PDIPNVPTRRLK-----PVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQ 414
+SSLF NN P V T K P + + T++ G++ + +L E +
Sbjct: 100 VSSLFTNNEPTSHLVTTSTTKELTYLPSNAPMKDATTFSGL-GLNEKLSTHLTEHLRFMH 158
Query: 415 VTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYAVII 472
T +QQL I ++ D+ V++QTGSGKTLA+ +PI KL +E + KI+R+ G++A+I+
Sbjct: 159 PTKIQQLVIPSLIATENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLFAIIL 218
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + L + W+VP + GGEK KSEKAR+RKG +ILVATPGRL DH
Sbjct: 219 TPTRELATQIYGVLETLTRCHHWVVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHL 278
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------PQFQ-------S 579
++T+TL S++ LVLDE D++++ G+E IA+ + ++Q +
Sbjct: 279 ENTKTLDISQLRWLVLDEGDKLMELGFEETIAQITAKIDSNSKIADTAEKWQGLPSRRIN 338
Query: 580 ILLSATLTPAVQRLAGMTLQNP--IQIDAAD-----STDIHNTTDSLVIPDSLKQHFIVT 632
+L SATL V++L + L+NP I ++ A S D T + PD L Q+ +V
Sbjct: 339 MLCSATLHSNVKKLGSIVLKNPEMISVETASVPGTVSFDETIATTTSTAPDQLIQNVVVV 398
Query: 633 PPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS-------------- 678
PPKLRLV L + +L C++ E + +VF + D D+H ++ +
Sbjct: 399 PPKLRLVTLDALLLSICKHSTE----RTIVFFSCSDSVDFHFDVFTRDGKKFKKMTDEES 454
Query: 679 ----TV-------------------LGENIAFFKLHGSMSQSERTEVFKTF---RSVKSG 712
TV L +N +KLHGS+SQ RT ++F + +
Sbjct: 455 GEVKTVLVSPEDDENEDNGVLTAPQLSDNTIVYKLHGSLSQQSRTSTLQSFIKDNNSYNK 514
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKL 771
+L CTDVA+RGLDLP V +++Y P + D++HR+GR+AR+G+EG++ LFL+P E
Sbjct: 515 ILFCTDVASRGLDLPNVANVIEYDPPFTIDDHLHRIGRSARLGNEGNATLFLLPGIEEGY 574
Query: 772 VE-ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD--GNVETAATALQMSFESAVLQ 828
VE +L+ R +++K+ + L +G++ + G + AT + E +L+
Sbjct: 575 VEGKLKVAHPREGNLRVKNYEEILQEGFAQGNIKSKDNKLGKWDIHATTWHLDVERWLLE 634
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS-GIGKP 887
+ H A + +TS +R YA++ R FN K +HLGH AKSF LR+ P + +G
Sbjct: 635 DQASHDEAVRAFTSHIRAYATHLSSEREFFNVKLLHLGHLAKSFGLRETPKKLGKSVGNN 694
Query: 888 KNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
N E K K ++K + + K SEF+
Sbjct: 695 SNYSESKKGKKEDPRKKMLRM-AKMAVKSASSEFN 728
Score = 186 bits (472), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 186/344 (54%), Gaps = 62/344 (18%)
Query: 7 TTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYAVIIL 64
T +QQL I ++ D+ V++QTGSGKTLA+ +PI KL +E + KI+R+ G++A+I+
Sbjct: 160 TKIQQLVIPSLIATENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLFAIILT 219
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q + L + W+VP + GGEK KSEKAR+RKG +ILVATPGRL DH +
Sbjct: 220 PTRELATQIYGVLETLTRCHHWVVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHLE 279
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
+T+TL S++ LVLDE D++++ G+E IA+
Sbjct: 280 NTKTLDISQLRWLVLDEGDKLMELGFEETIAQI--------------------------- 312
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
T K +D +I D AE + L ++ ++L SATL V++
Sbjct: 313 ----TAK--------IDSNSKIA------DTAEKWQGLPSRRI---NMLCSATLHSNVKK 351
Query: 245 LAGMTLQNP--IQIDAAD-----STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
L + L+NP I ++ A S D T + PD L Q+ +V PPKLRLV L + +
Sbjct: 352 LGSIVLKNPEMISVETASVPGTVSFDETIATTTSTAPDQLIQNVVVVPPKLRLVTLDALL 411
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTK-KKIKKLKE 340
L C++ E + +VF + D D+H ++ + KK KK+ +
Sbjct: 412 LSICKHSTE----RTIVFFSCSDSVDFHFDVFTRDGKKFKKMTD 451
>gi|428167279|gb|EKX36241.1| hypothetical protein GUITHDRAFT_48109, partial [Guillardia theta
CCMP2712]
Length = 494
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 285/498 (57%), Gaps = 38/498 (7%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
+NL + +++T +Q+ ++ IL G DV+++++TG+GKTLAY P+++ L + +++R
Sbjct: 10 ENLKTLFSASRMTLIQRGAVPAILRGADVMMKAKTGTGKTLAYLTPVVEWLVTRKERLTR 69
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG +A+I++PTREL LQ E+ + L + F W+VP L GGEK KSEKARIRKG+S+LV
Sbjct: 70 ADGSFALIVVPTRELGLQVHEVLSNLLRPFHWLVPGLLIGGEKKKSEKARIRKGLSVLVG 129
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK-----PQFQ 578
TPGRL DH + TE ++ L+ DEADR++D G+E+DI + +++++ + Q
Sbjct: 130 TPGRLSDHVRTTECFNVKSMQFLIFDEADRLMDMGFEQDINCICDFVREKRDKSCPTRMQ 189
Query: 579 SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHN-----------------TTDSLVI 621
++L+SATL V++ A L +P+ + + S + +
Sbjct: 190 TVLVSATLQQKVRQFAHSLLSSPVYVTDSSSGAMMTETGEEGKEEEAGEGEDEENKKFEL 249
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMAT-QDMADYHTELLSTV 680
P L+Q+++ P K RL++L SF+ + +++ KM+VF+++ ++ H L V
Sbjct: 250 PSRLRQYWMSIPCKRRLLSLCSFL--RQRSIPSTRACKMIVFVSSIAEVKFLHYLLPRAV 307
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
L ++I + LHG M+Q+ERT+ F F + +L+CTDVAARGLD P ++WIVQ+ P+
Sbjct: 308 LPDDIPIYGLHGDMTQAERTKSFYGFTASSRAILVCTDVAARGLDFPKIEWIVQFDPPTE 367
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKME 800
+YVHR GRTAR+ EG +LLFL+P E K V L + + I + L
Sbjct: 368 LEEYVHRCGRTARMTTEGDALLFLMPHEEKYVSLLGKHGLSLSPIPTRTLL--------- 418
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTS--ACKGYTSWVRFYASYSKDLRHIF 858
+S E +LQ + A +TS+ R YA+++K + IF
Sbjct: 419 --VSEERRRRGGEGGGGGGREGEVWMLQSNPDPPAELARDAFTSFTRAYATHNKGTKAIF 476
Query: 859 NFKQIHLGHFAKSFALRD 876
+ K +HLGH A SFALR+
Sbjct: 477 HPKALHLGHVAASFALRE 494
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 128/182 (70%), Gaps = 5/182 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +++T +Q+ ++ IL G DV+++++TG+GKTLAY P+++ L + +++R DG +A
Sbjct: 16 FSASRMTLIQRGAVPAILRGADVMMKAKTGTGKTLAYLTPVVEWLVTRKERLTRADGSFA 75
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTREL LQ E+ + L + F W+VP L GGEK KSEKARIRKG+S+LV TPGRL
Sbjct: 76 LIVVPTRELGLQVHEVLSNLLRPFHWLVPGLLIGGEKKKSEKARIRKGLSVLVGTPGRLS 135
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK-----PQFQSILLSA 175
DH + TE ++ L+ DEADR++D G+E+DI + +++++ + Q++L+SA
Sbjct: 136 DHVRTTECFNVKSMQFLIFDEADRLMDMGFEQDINCICDFVREKRDKSCPTRMQTVLVSA 195
Query: 176 TL 177
TL
Sbjct: 196 TL 197
>gi|150865902|ref|XP_001385306.2| ATP-dependent RNA helicase DBP7 (DEAD-box protein 7)
[Scheffersomyces stipitis CBS 6054]
gi|158514825|sp|A3LWH3.2|DBP7_PICST RecName: Full=ATP-dependent RNA helicase DBP7
gi|149387158|gb|ABN67277.2| ATP-dependent RNA helicase DBP7 (DEAD-box protein 7)
[Scheffersomyces stipitis CBS 6054]
Length = 733
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 219/630 (34%), Positives = 329/630 (52%), Gaps = 82/630 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAPT-------SYEEFPGIHPFMKKNLNEGMNIT 413
+SSLF +N + + K E + P+ S E GI+ + K+L E +
Sbjct: 109 VSSLFTSNQSSSQL--KVTKESDEKTYLPSNAPVEDASTFEGLGINERLSKHLTETLRFK 166
Query: 414 QVTTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQ-EMRPKISRKDGIYAVI 471
T VQ+ I +L D+ +++QTGSGKTL++ +PI KL E + KI+R G++AVI
Sbjct: 167 NPTKVQKSVIPTMLSTERDLFIKAQTGSGKTLSFLLPIFHKLMMENKHKINRDSGLFAVI 226
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTRELA Q + L + + IVP + GGEK KSEKARIRKG++ILV TPGRL DH
Sbjct: 227 LTPTRELATQIYGVLETLTRCYHHIVPGIVIGGEKKKSEKARIRKGVNILVGTPGRLADH 286
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS------------ 579
++TE+L S++ L+LDE D++++ G+E I + ++ + +S
Sbjct: 287 MENTESLDISQLRWLILDEGDKLVELGFEETITKITNLITRNSQIMESMHKWQGLPVRRI 346
Query: 580 -ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 638
+L SAT+ V++L + L NP I S+ H ++ + PD L Q+ +V PPKLRL
Sbjct: 347 NLLCSATMQNNVEKLGSIILNNPEMISDGSSSGKH--SEEVTAPDQLIQNVVVVPPKLRL 404
Query: 639 VALASFILGKCQN--VNEDEESKMLVFMATQDMADYHTEL------------------LS 678
V L++ IL K + + ++ +VF + D ++H ++ L
Sbjct: 405 VTLSA-ILKKISSDMSGTNNSTRTIVFFSCSDSVNFHFDVFTRGGNTFKKVKNDESGKLE 463
Query: 679 TV--------LGENIAFFKLHGSMSQSERTEVFKTF-RSVKSG--VLICTDVAARGLDLP 727
TV +G+ A +KLHGS+SQ RT + F + KS +L CTDVA+RGLDLP
Sbjct: 464 TVEVENDTPLIGQGTAVYKLHGSLSQQTRTSTLQAFIKDSKSNHSILFCTDVASRGLDLP 523
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS--EVKLVEELQ-------NR 778
+ +++Y P + D++HR+GR+ARVG EG++ LFL+P E + +LQ N
Sbjct: 524 NIASVIEYDPPFTIDDHLHRIGRSARVGKEGTATLFLLPGNEEGYVDGKLQVVHPKEGNL 583
Query: 779 RIRIEEIKLKDCL---QNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTS 835
RI E LKD N K + + +G + AT + E +L+ H
Sbjct: 584 RIVNYENYLKDGFSAKSNNEDTKKKSKDPKSREGKWDIHATTWHLDIERWLLEDSGAHDK 643
Query: 836 ACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP----------SVISGIG 885
A + +TS +R YA++ R+ FN K +HLGH AKSF LR+ P S I G
Sbjct: 644 AVQAFTSHIRAYATHLSSERNYFNVKLLHLGHLAKSFGLRETPKKLGKSVESNSGIQGAS 703
Query: 886 KPKNKEELKNK--KMAINKEKSFKQRGNFS 913
K KE+ + K +MA KS N+S
Sbjct: 704 KKTKKEDPRKKMLRMAKMALKSNSDEFNYS 733
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 150/268 (55%), Gaps = 15/268 (5%)
Query: 22 DVLVRSQTGSGKTLAYAIPIIQKLQ-EMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 80
D+ +++QTGSGKTL++ +PI KL E + KI+R G++AVI+ PTRELA Q + L
Sbjct: 185 DLFIKAQTGSGKTLSFLLPIFHKLMMENKHKINRDSGLFAVILTPTRELATQIYGVLETL 244
Query: 81 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 140
+ + IVP + GGEK KSEKARIRKG++ILV TPGRL DH ++TE+L S++ L+LD
Sbjct: 245 TRCYHHIVPGIVIGGEKKKSEKARIRKGVNILVGTPGRLADHMENTESLDISQLRWLILD 304
Query: 141 EADRILDQGYERDIAEFLEILKKQKPQFQSI--LLSATLTPATCWCKHTETLKFSKVEHL 198
E D++++ G+E I + ++ + +S+ + C T K+ +
Sbjct: 305 EGDKLVELGFEETITKITNLITRNSQIMESMHKWQGLPVRRINLLCSATMQNNVEKLGSI 364
Query: 199 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDA 258
+L+ + I D +E E+ + ++ + + P RL +TL ++ +
Sbjct: 365 ILNNPEMISDGSSSGKHSE--EVTAPDQ-----LIQNVVVVPPKLRL--VTLSAILKKIS 415
Query: 259 ADSTDIHNTTDSLVI---PDSLKQHFIV 283
+D + +N+T ++V DS+ HF V
Sbjct: 416 SDMSGTNNSTRTIVFFSCSDSVNFHFDV 443
>gi|145352024|ref|XP_001420359.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580593|gb|ABO98652.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 560
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/567 (35%), Positives = 298/567 (52%), Gaps = 58/567 (10%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
S+EE G+ M K+L E + T VQ +I +L G DVLVR++TGSGKTL+Y P+
Sbjct: 1 SFEEC-GLPASMVKHLMENVGFGAPTAVQAKTIPRLLAGRDVLVRAETGSGKTLSYIAPL 59
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
K+ + P+++R++G ++++PTRELA Q + ++ + F W+V S + GGE E
Sbjct: 60 YSKIGGITPRVTREEGTRGLVLVPTRELATQVEDTARRVGRPFHWVVTSSIMGGENRAKE 119
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL-EI 569
KAR+RKG+S+L+ATPGRLLDH + TE+ + LVLDEADR+LD G+E D+ L EI
Sbjct: 120 KARLRKGVSLLIATPGRLLDHLRMTESFNVDNLRWLVLDEADRLLDLGFEEDLNAILNEI 179
Query: 570 LKK-QKPQFQSILLSATLTPAVQRLAGMTLQNPI-----------QIDAADSTD------ 611
++ + + LLSATLTP RLA + +P+ +I AD +D
Sbjct: 180 GRRTEGASLCTALLSATLTPGTARLA-ERMTDPVTIVVEPEKDDLEIVGADGSDDEEGGT 238
Query: 612 -----------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKM 660
I + + +P+ L + K RL ALA + G Q SK
Sbjct: 239 MDVDGLKRMAKIMAGGERVRMPEGLNHTVVEVSMKARLPALAGLLAGWMQG----SISKA 294
Query: 661 LVFMATQDMADYHTELLSTVLGENIA--------------FFKLHGSMSQSERTEVFKTF 706
+VF ++ + +YH + L + F+LHG +SQ +R VF+ F
Sbjct: 295 IVFFSSCESVEYHYKTLRWLAAGGKGKVKDDDDSIQGPYEIFRLHGLLSQGDRASVFRNF 354
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
+ K+GVL+CTDV ARGLD V VQ AP+ +T Y+HRVGRTAR+G EG ++LFL P
Sbjct: 355 ANTKAGVLLCTDVGARGLDFVGVGATVQVDAPTDATTYIHRVGRTARLGSEGEAVLFLQP 414
Query: 767 SEVKLVEELQNRRIRIEE---IKLKDCLQNLLSVKMEGDLSRLAD-GNVETAATALQMSF 822
E + E L + + + + D L++ E D S ++ A+ +
Sbjct: 415 KEREFAEVLTEKGVNFANGSVVAMLDVLEDSKDAS-ERDKSMFKSMPHLHPASQRMLKKL 473
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
+ V K A + + VR YA++ +HIF+ K++HLGH A +F L+DAP +
Sbjct: 474 VAKVASDKQYDVLAKDAFRAHVRAYATFPSAFKHIFHVKRLHLGHVAAAFGLKDAPQL-- 531
Query: 883 GIGKPKNKEELKNKKMAINKEKSFKQR 909
IG K LK +K A K+ + R
Sbjct: 532 -IGASATKAALKAQKDAARKKSNVDAR 557
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 187/369 (50%), Gaps = 48/369 (13%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I +L G DVLVR++TGSGKTL+Y P+ K+ + P+++R++G ++++PT
Sbjct: 25 TAVQAKTIPRLLAGRDVLVRAETGSGKTLSYIAPLYSKIGGITPRVTREEGTRGLVLVPT 84
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA Q + ++ + F W+V S + GGE EKAR+RKG+S+L+ATPGRLLDH + T
Sbjct: 85 RELATQVEDTARRVGRPFHWVVTSSIMGGENRAKEKARLRKGVSLLIATPGRLLDHLRMT 144
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFL-EILKK-QKPQFQSILLSATLTPATCWC 184
E+ + LVLDEADR+LD G+E D+ L EI ++ + + LLSATLTP T
Sbjct: 145 ESFNVDNLRWLVLDEADRLLDLGFEEDLNAILNEIGRRTEGASLCTALLSATLTPGTARL 204
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
T + V D+ + + G + + +++ ++R
Sbjct: 205 AERMTDPVTIVVEPEKDDLEIVGADGSDDEEGGTMDV------------------DGLKR 246
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
+A I + + +P+ L + K RL ALA + G Q
Sbjct: 247 MA----------------KIMAGGERVRMPEGLNHTVVEVSMKARLPALAGLLAGWMQG- 289
Query: 305 NEDEESKMLVFMATQDMADYHTELL-----STKKKIKKLKEYNIDPDNYEIPKKTEVKS- 358
SK +VF ++ + +YH + L K K+K + P YEI + + S
Sbjct: 290 ---SISKAIVFFSSCESVEYHYKTLRWLAAGGKGKVKDDDDSIQGP--YEIFRLHGLLSQ 344
Query: 359 GPISSLFQN 367
G +S+F+N
Sbjct: 345 GDRASVFRN 353
>gi|452979026|gb|EME78789.1| hypothetical protein MYCFIDRAFT_43609 [Pseudocercospora fijiensis
CIRAD86]
Length = 739
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 303/565 (53%), Gaps = 73/565 (12%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQ 455
G+ + +L + I T +Q+ +++ + + D +++QTGSGKTLAY +PI++++
Sbjct: 141 GLSESLANHLLRKLEIKAPTAIQRKAVKQLCENDTDAFLQAQTGSGKTLAYLLPIVERIS 200
Query: 456 EMRPKI-------SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
+ K+ SR+ G++A+I+ PTREL+ Q + L + WIV + GGEK K
Sbjct: 201 TISKKMKASGQDFSRESGLFAIILAPTRELSKQIASVLEGLLSCYHWIVAGTVIGGEKKK 260
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
SEKAR+RKG++ILVATPGR++DH +HTETL S V LVLDE DR+++ G+E+DI + +
Sbjct: 261 SEKARLRKGLNILVATPGRMVDHLEHTETLDLSSVRWLVLDEGDRLMELGFEQDIQKIIS 320
Query: 569 ILK-KQKPQFQS-----------ILLSATLTPAVQRLAGMTLQNPI--QIDAADSTDIHN 614
+L + + + +S +L SAT+ ++ +L ++L++P+ +DA D+ +
Sbjct: 321 VLNLRSRKRVESPLPGLPDRRTTVLCSATIKASIDQLRSISLKDPVTLAVDANDTEEHGE 380
Query: 615 TTD----SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 670
++ + P LKQ +++ PPK RLV L + + K + K +VFM+ D
Sbjct: 381 ASEPEASTFSAPAQLKQGYVIVPPKQRLVTLVAVL--KQTFKRKGSVMKCIVFMSCADSV 438
Query: 671 DYHTELLSTVLG---------------------------ENIA-FFKLHGSMSQSERTEV 702
D+H ELL+ G EN A F HGS+ Q+ RT
Sbjct: 439 DFHFELLTQGDGNAAAQEESPPSKRPHKPLKQHLPADTFENGADFTSRHGSLQQATRTGT 498
Query: 703 FKTFR-SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
K F S + VLICTDVAARGLDLP +D +++Y P S D++HR+GRTAR G +G ++
Sbjct: 499 LKAFSASTEPAVLICTDVAARGLDLPNIDLVIEYDPPFSKDDHLHRIGRTARAGKDGRAM 558
Query: 762 LFLIPSE----VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATA 817
+FL P + +++E + R + E L+ + + E AT
Sbjct: 559 IFLQPGREEGYITILKESKPRNLTRHES------SELMKKGFTPTTGVVGPNDWEQKATD 612
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
Q+ E L+ A + Y S VR YA++ RHIFN +++HLGH AK+FALRD
Sbjct: 613 FQIEIERWALENPKHLEQARRAYQSHVRAYATHVSAERHIFNMQELHLGHLAKAFALRDK 672
Query: 878 PSVIS------GIGKPKNKEELKNK 896
P I G+G K + N+
Sbjct: 673 PGSIRVPGSRPGVGAAKKAKSEANQ 697
Score = 176 bits (447), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 179/345 (51%), Gaps = 67/345 (19%)
Query: 1 MNITQVTTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI------- 52
+ I T +Q+ +++ + + D +++QTGSGKTLAY +PI++++ + K+
Sbjct: 154 LEIKAPTAIQRKAVKQLCENDTDAFLQAQTGSGKTLAYLLPIVERISTISKKMKASGQDF 213
Query: 53 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 112
SR+ G++A+I+ PTREL+ Q + L + WIV + GGEK KSEKAR+RKG++IL
Sbjct: 214 SRESGLFAIILAPTRELSKQIASVLEGLLSCYHWIVAGTVIGGEKKKSEKARLRKGLNIL 273
Query: 113 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKPQFQSI 171
VATPGR++DH +HTETL S V LVLDE DR+++ G+E+DI + + +L + + + +S
Sbjct: 274 VATPGRMVDHLEHTETLDLSSVRWLVLDEGDRLMELGFEQDIQKIISVLNLRSRKRVESP 333
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
L T C
Sbjct: 334 LPGLPDRRTTVLC----------------------------------------------- 346
Query: 232 VLLSATLTPAVQRLAGMTLQNPI--QIDAADSTDIHNTTD----SLVIPDSLKQHFIVTP 285
SAT+ ++ +L ++L++P+ +DA D+ + ++ + P LKQ +++ P
Sbjct: 347 ---SATIKASIDQLRSISLKDPVTLAVDANDTEEHGEASEPEASTFSAPAQLKQGYVIVP 403
Query: 286 PKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
PK RLV L + + K + K +VFM+ D D+H ELL+
Sbjct: 404 PKQRLVTLVAVL--KQTFKRKGSVMKCIVFMSCADSVDFHFELLT 446
>gi|344228809|gb|EGV60695.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 752
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 304/571 (53%), Gaps = 86/571 (15%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG-GDVLVRSQTG 439
P + L T++E G++P + +L E + T VQ+ +I +L D+ +++QTG
Sbjct: 147 PSNAPLKDATTFEGL-GLNPKLVSHLTETLRFKNPTKVQRSTIPSLLFAKSDLFIKAQTG 205
Query: 440 SGKTLAYAIPIIQKL-QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVP 498
SGKTLA+ +PI KL QE + KI+R+ G++A+I+ PTRELA Q + L + IVP
Sbjct: 206 SGKTLAFLLPIFHKLMQEDKHKITRESGVFAMILAPTRELATQIYSVLETLSRCHHQIVP 265
Query: 499 SWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQG 558
+ GGEK KSEKAR+RKG++ILV TPGRL DH ++T+ L S++ L+LDE DR+++ G
Sbjct: 266 GIVIGGEKKKSEKARLRKGVNILVGTPGRLADHIENTQVLNLSQLRWLILDEGDRLVELG 325
Query: 559 YERDIAEFLEILKKQK------PQFQ-------SILLSATLTPAVQRLAGMTLQNPIQI- 604
+E I++ + K P++Q ++L SAT+ V++L + L NP I
Sbjct: 326 FEETISKITNQITKTSEIHHTAPKWQGLPTKRVNVLCSATMQENVEKLGSILLDNPEMIT 385
Query: 605 ---------------DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
D + T+ +T+ ++ PD L Q+ ++ PPKLRLV L +
Sbjct: 386 VDSKRAIEGTVIFNDDDVEETETEDTSQNMTAPDQLTQNVLIVPPKLRLVTLNAMF---- 441
Query: 650 QNVNEDEES---KMLVFMATQDMADYHTELLST--------------------------- 679
+N D + + +VF D +YH ++ +
Sbjct: 442 KNFTHDRQVDHLRTMVFFTCSDSVNYHFDVFTRGGKPLSKHKEGSEDDAEEFEYSIATAP 501
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTF---RSV-KSGVLICTDVAARGLDLPLVDWIVQY 735
++ + A FKLHGSM+Q ERT + F SV K +L CTDVA+RGLDLP + +V+Y
Sbjct: 502 LISSDTAVFKLHGSMTQQERTSTLQGFVKDSSVYKHSILFCTDVASRGLDLPNISEVVEY 561
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIP--------SEVKLVEELQNRRIRIEEIKL 787
P S D++HR+GR+ARVG+EGS+ +FL+P +++ +V + +I E L
Sbjct: 562 DPPFSIEDHLHRIGRSARVGNEGSASIFLLPGIEETYIDAKLSIVHPKGSLKIEGYEKLL 621
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
K S K G + AT ++ E +L+ +H A +TS +R Y
Sbjct: 622 KKAYSEPDSAK--------GRGKWDIHATTWHLNIERWILEDSGVHDKATLAFTSHIRAY 673
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
A++ R+ FN K++HLGH AK+F LR+ P
Sbjct: 674 ATHLSSERNFFNVKELHLGHLAKAFGLRENP 704
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 177/350 (50%), Gaps = 54/350 (15%)
Query: 7 TTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYAVIIL 64
T VQ+ +I +L D+ +++QTGSGKTLA+ +PI KL QE + KI+R+ G++A+I+
Sbjct: 181 TKVQRSTIPSLLFAKSDLFIKAQTGSGKTLAFLLPIFHKLMQEDKHKITRESGVFAMILA 240
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q + L + IVP + GGEK KSEKAR+RKG++ILV TPGRL DH +
Sbjct: 241 PTRELATQIYSVLETLSRCHHQIVPGIVIGGEKKKSEKARLRKGVNILVGTPGRLADHIE 300
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------PQFQSILLSATLT 178
+T+ L S++ L+LDE DR+++ G+E I++ + K P++Q +
Sbjct: 301 NTQVLNLSQLRWLILDEGDRLVELGFEETISKITNQITKTSEIHHTAPKWQGL----PTK 356
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
C T K+ ++LD + I
Sbjct: 357 RVNVLCSATMQENVEKLGSILLDNPEMI-------------------------------T 385
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
+ + + G + N D + T+ +T+ ++ PD L Q+ ++ PPKLRLV L +
Sbjct: 386 VDSKRAIEGTVIFND---DDVEETETEDTSQNMTAPDQLTQNVLIVPPKLRLVTLNAMF- 441
Query: 299 GKCQNVNEDEES---KMLVFMATQDMADYHTELLSTKKK-IKKLKEYNID 344
+N D + + +VF D +YH ++ + K + K KE + D
Sbjct: 442 ---KNFTHDRQVDHLRTMVFFTCSDSVNYHFDVFTRGGKPLSKHKEGSED 488
>gi|68487293|ref|XP_712474.1| hypothetical protein CaO19.6902 [Candida albicans SC5314]
gi|77022602|ref|XP_888745.1| hypothetical protein CaO19_6902 [Candida albicans SC5314]
gi|74679677|sp|Q59S50.1|DBP7_CANAL RecName: Full=ATP-dependent RNA helicase DBP7
gi|46433864|gb|EAK93291.1| hypothetical protein CaO19.6902 [Candida albicans SC5314]
gi|76573558|dbj|BAE44642.1| hypothetical protein [Candida albicans]
Length = 727
Score = 315 bits (806), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 335/644 (52%), Gaps = 99/644 (15%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVS---EALFAPTSY-----EEFPGI--HPFMKKNLNEGM 410
+SSLF NN PT L P S E + P++ F G+ + + +L + +
Sbjct: 100 VSSLFTNNQ-----PTSHLAPTSTTKELTYLPSNAPMKDATNFSGLGLNEKLSIHLTDHL 154
Query: 411 NITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIY 468
T +QQL I ++ D+ V++QTGSGKTLA+ +PI KL +E + KI+R+ G++
Sbjct: 155 RFMHPTKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLF 214
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+I+ PTRELA Q + L + WIVP + GGEK KSEKAR+RKG +ILVATPGRL
Sbjct: 215 AIILTPTRELATQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILVATPGRL 274
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------PQFQ---- 578
DH ++T+TL S++ LVLDE D++++ G+E IA+ + ++Q
Sbjct: 275 ADHLENTKTLDISQLRWLVLDEGDKLMELGFEDTIAQITAKIDSNSKIADTAEKWQGLPS 334
Query: 579 ---SILLSATLTPAVQRLAGMTLQNP--IQIDAAD-----STDIHNTTDSLVIPDSLKQH 628
++L SATL V++L + L++P I ++ A S D T + PD L Q+
Sbjct: 335 RRINMLCSATLHSNVKKLGSIVLKDPEMISVETASVAGTVSFDETIATTTSTAPDQLIQN 394
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS---------- 678
+V PPKLRLV L + +L +++ + +VF + D D+H ++ +
Sbjct: 395 VVVVPPKLRLVTLDALLL----KISKHSAERTIVFFSCSDSVDFHFDVFTRDGKKFKKVT 450
Query: 679 --------TV-----------------LGENIAFFKLHGSMSQSERTEVFKTF---RSVK 710
TV L +N +KLHGS+SQ R ++F +
Sbjct: 451 DEETGEVKTVLVSPEDDENDGLLTAPQLSDNTIIYKLHGSLSQQTRASTLQSFVKDNNSY 510
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+ +L CTDVA+RGLDLP V +++Y P + D++HR+GR+AR+G+EG++ LFL+P
Sbjct: 511 NKILFCTDVASRGLDLPNVANVIEYDPPFTIDDHLHRIGRSARLGNEGNATLFLLPG--- 567
Query: 771 LVEELQNRRIRIEEIKLKDC-LQNLLSVKMEGDLSRLADGNVETA----------ATALQ 819
+ E + ++R+ + + ++N + EG A GN+++ AT
Sbjct: 568 IEEGYVDGKLRVAHPREGNLRVKNYEKILQEG----FAQGNIKSKDNKLGKWDIHATTWH 623
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
+ E +L+ + H A + +TS +R YA++ R FN K +HLGH AKSF LR+ P
Sbjct: 624 LDVERWLLEDQASHDEAVRAFTSHIRAYATHLSSEREFFNVKLLHLGHLAKSFGLRETPK 683
Query: 880 VIS-GIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ +G N E K K ++K + + K SEF+
Sbjct: 684 KLGKSVGNNSNYSESKKGKKEDPRKKMLRM-AKMAVKSASSEFN 726
Score = 179 bits (453), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 185/344 (53%), Gaps = 62/344 (18%)
Query: 7 TTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYAVIIL 64
T +QQL I ++ D+ V++QTGSGKTLA+ +PI KL +E + KI+R+ G++A+I+
Sbjct: 160 TKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLFAIILT 219
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q + L + WIVP + GGEK KSEKAR+RKG +ILVATPGRL DH +
Sbjct: 220 PTRELATQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHLE 279
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
+T+TL S++ LVLDE D++++ G+E IA+
Sbjct: 280 NTKTLDISQLRWLVLDEGDKLMELGFEDTIAQI--------------------------- 312
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
T K +D +I D AE + L ++ ++L SATL V++
Sbjct: 313 ----TAK--------IDSNSKIA------DTAEKWQGLPSRRI---NMLCSATLHSNVKK 351
Query: 245 LAGMTLQNP--IQIDAAD-----STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
L + L++P I ++ A S D T + PD L Q+ +V PPKLRLV L + +
Sbjct: 352 LGSIVLKDPEMISVETASVAGTVSFDETIATTTSTAPDQLIQNVVVVPPKLRLVTLDALL 411
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTK-KKIKKLKE 340
L +++ + +VF + D D+H ++ + KK KK+ +
Sbjct: 412 L----KISKHSAERTIVFFSCSDSVDFHFDVFTRDGKKFKKVTD 451
>gi|444319808|ref|XP_004180561.1| hypothetical protein TBLA_0D05490 [Tetrapisispora blattae CBS 6284]
gi|387513603|emb|CCH61042.1| hypothetical protein TBLA_0D05490 [Tetrapisispora blattae CBS 6284]
Length = 755
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 220/653 (33%), Positives = 340/653 (52%), Gaps = 88/653 (13%)
Query: 352 KKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEAL---FAPTSYEEFP--GIHPFMKKNL 406
K +V S +SSLF +N DI + SE + AP E F I F+ +L
Sbjct: 108 KHIQVNSQIVSSLFTSNRDIVTSTNDNARNESEPIQPTNAPMLKESFEWFNIPEFVTSHL 167
Query: 407 NEGMNITQVTTVQQLSIQPILD--GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
E + I + T++Q L+I +L+ D+ + +QTGSGKTLAY +PI+ K+ M+ +I RK
Sbjct: 168 TEKLRIQKPTSIQSLAIPALLNKKDNDLFIHAQTGSGKTLAYLLPILSKILNMKARIDRK 227
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
G +AVII PTRELA Q ++ L ++VP L GGE KSEKAR+RKG + ++ T
Sbjct: 228 SGAFAVIIAPTRELAQQIYQVSISLMGCCHYLVPCLLIGGESKKSEKARLRKGCNFIIGT 287
Query: 525 PGRLLDHCKHTETLK--FSK-VEHLVLDEADRILDQGYERDIAEFLEILK------KQKP 575
PGR+LDH ++T+ ++ FS+ + +++LDE D++++ G+E I++ L+I+ ++ P
Sbjct: 288 PGRILDHLQNTKVIREQFSQSLRYIILDEGDKLMELGFEETISQILQIIHGVTIDTRKFP 347
Query: 576 QFQS----ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
S IL SAT ++ L + L++ I + + + + + +PD L Q+ V
Sbjct: 348 ALPSRIVHILCSATRQGKIKDLGNIALKDYQLISSGKHKNKGASEEKISVPDQLVQYISV 407
Query: 632 TPPKLRLVALASFILGKCQNVNE-----DEESKMLVFMATQDMADYHTELLST------- 679
PPKLRLV LA +L N+ + ++ ++F + D D+H S+
Sbjct: 408 VPPKLRLVTLAG-VLNNITRKNQVLGDARKTTRTIIFFSCADSVDFHYSTFSSSDGHSRN 466
Query: 680 VLGE---------------------NIAFFKLHGSMSQSERTEVFKTFR------SVKSG 712
+LGE NI +KLHGS+SQ RT K F + K
Sbjct: 467 LLGESVRILSTGNTIFPCLNPEEDPNIICYKLHGSLSQQMRTSTLKHFSQDNDSTNGKHL 526
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLV 772
+L CTDVA+RGLDLP + ++++ P S D++HR+GRTAR G +G S+LFL+P E
Sbjct: 527 ILFCTDVASRGLDLPNIGTVIEFDPPFSVEDHLHRIGRTARAGQKGESVLFLLPGE---- 582
Query: 773 EELQNRRIR---IEEIKLKDCLQNLLSVKME------GDLSRLADGNV---ETAATALQM 820
EE I+ + KL + QN+L + D ++ N+ +T AT +
Sbjct: 583 EEGYMDYIKPYHPKGWKLLNFSQNILQPAFQDATVNRNDRAKKKPSNINEWDTNATTWHL 642
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ E ++ A +GYTS VR YA++ + FN K +HLGH AKSFALR+ P
Sbjct: 643 NIERRAIEDPAFKGLAVQGYTSHVRAYATHISKEKQFFNIKFLHLGHLAKSFALRERPKS 702
Query: 881 IS--------GIGKPKNKEELKNKKMA---INKEKSFKQRGNFSKKQMLSEFD 922
++ K + EE K +A INK K +K + ++ SEF+
Sbjct: 703 MAIQRENEKKRKAKIEEDEEDYKKPLADDKINKNKMWKM-ARMAVREAASEFN 754
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 174/341 (51%), Gaps = 62/341 (18%)
Query: 1 MNITQVTTVQQLSIQPILD--GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 58
+ I + T++Q L+I +L+ D+ + +QTGSGKTLAY +PI+ K+ M+ +I RK G
Sbjct: 171 LRIQKPTSIQSLAIPALLNKKDNDLFIHAQTGSGKTLAYLLPILSKILNMKARIDRKSGA 230
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+AVII PTRELA Q ++ L ++VP L GGE KSEKAR+RKG + ++ TPGR
Sbjct: 231 FAVIIAPTRELAQQIYQVSISLMGCCHYLVPCLLIGGESKKSEKARLRKGCNFIIGTPGR 290
Query: 119 LLDHCKHTETLK--FSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
+LDH ++T+ ++ FS+ + +++LDE D++++ G+E I++ L+I+
Sbjct: 291 ILDHLQNTKVIREQFSQSLRYIILDEGDKLMELGFEETISQILQII-------------- 336
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
H T+ K L RI+ +L S
Sbjct: 337 ----------HGVTIDTRKFPAL----PSRIV-----------------------HILCS 359
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT ++ L + L++ I + + + + + +PD L Q+ V PPKLRLV LA
Sbjct: 360 ATRQGKIKDLGNIALKDYQLISSGKHKNKGASEEKISVPDQLVQYISVVPPKLRLVTLAG 419
Query: 296 FILGKCQNVNE-----DEESKMLVFMATQDMADYHTELLST 331
+L N+ + ++ ++F + D D+H S+
Sbjct: 420 -VLNNITRKNQVLGDARKTTRTIIFFSCADSVDFHYSTFSS 459
>gi|453081481|gb|EMF09530.1| ATP-dependent RNA helicase dbp7 [Mycosphaerella populorum SO2202]
Length = 776
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 214/636 (33%), Positives = 322/636 (50%), Gaps = 100/636 (15%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVS------EALFAPTSYEEFP-----GIHPFMKKNLNEG 409
I+SLF N VP R KP + EA AP +E G+ P + +L +
Sbjct: 110 ITSLFSFN-KAATVP-REAKPETSEETTVEASNAPLENDETAKFTSLGLSPTLAAHLLKK 167
Query: 410 MNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQK-------LQEMRPKI 461
+NIT T +Q+ ++ Q + D +++QTGSGKTLAY +PI+++ +++ K
Sbjct: 168 LNITAPTAIQRKAVSQLVSHDTDAFIQAQTGSGKTLAYLLPIVERISLISRRMKDEGAKF 227
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
R G++A+++ PTRELA Q ++ L + W+V + GGE KSEK+R+RKG++IL
Sbjct: 228 DRHSGLFAIVLAPTRELARQIADVLESLLSCYHWVVGGTVIGGENKKSEKSRLRKGLNIL 287
Query: 522 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL------KKQKP 575
VATPGR+ DH ++TE L S V LVLDE DR+++ G+E+DI + + +L + +KP
Sbjct: 288 VATPGRMADHLENTEALDLSNVRWLVLDEGDRLMELGFEQDIQKIISVLNLRSRKRVEKP 347
Query: 576 ------QFQSILLSATLTPAVQRLAGMTLQNPIQI----DAADSTDIHNTTDSLVIPDSL 625
+ ++L SAT+ V++L ++L++P+ I D D ++ P L
Sbjct: 348 VPGLPERRTTVLCSATIKSNVEQLRAISLKDPVSIAVDSDPTAEGDGEAIENNFSAPAQL 407
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST------ 679
KQ + + PPK RLV L + + K Q + K +VFM+ D D+H ELL+
Sbjct: 408 KQGYAIVPPKQRLVTLVATL--KQQFKRKGSVLKCIVFMSCADSVDFHFELLTRGDKTAA 465
Query: 680 ---------------------------VLGENIA--------------------FFKLHG 692
G IA F+LHG
Sbjct: 466 VEDEVASVAKQHKPGKHSNSSVDRNKIAQGNTIAETRTEGTAASLSSRESGDIKIFRLHG 525
Query: 693 SMSQSERTEVFKTFRSVKS-GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
S+ Q+ RT K F + + VL+CTDVAARGLDLP VD +++Y P S D++HR+GRT
Sbjct: 526 SLQQTTRTSTLKAFSTCEDPAVLVCTDVAARGLDLPNVDLVIEYDPPFSKDDHLHRIGRT 585
Query: 752 ARVGHEGSSLLFLIPS-EVKLVEELQNRRIR-IEEIKLKDCLQNLLSVKMEGDLSRLADG 809
AR G +G +++FL P E +E L+ + + + + ++ L+ S L R
Sbjct: 586 ARAGRDGRAMIFLQPGCEEGYIEILKEGKPKNLTRHESEELLRKGFSPTSGVVLGR---- 641
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
E AT Q+ E L+ A +G+ S VR YA++ R IFN +++HLGH A
Sbjct: 642 EWEQIATDYQLEIERWALENPKHLEQARRGFQSHVRAYATHVSAERSIFNMQELHLGHLA 701
Query: 870 KSFALRDAPSVISGIG-KPKNKEELKNKKMAINKEK 904
K+FALRD P I G +P K K AI K
Sbjct: 702 KAFALRDKPGAIKVPGLRPGAGTNKKGKSHAIQNGK 737
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 171/349 (48%), Gaps = 57/349 (16%)
Query: 1 MNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQK-------LQEMRPKI 52
+NIT T +Q+ ++ Q + D +++QTGSGKTLAY +PI+++ +++ K
Sbjct: 168 LNITAPTAIQRKAVSQLVSHDTDAFIQAQTGSGKTLAYLLPIVERISLISRRMKDEGAKF 227
Query: 53 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 112
R G++A+++ PTRELA Q ++ L + W+V + GGE KSEK+R+RKG++IL
Sbjct: 228 DRHSGLFAIVLAPTRELARQIADVLESLLSCYHWVVGGTVIGGENKKSEKSRLRKGLNIL 287
Query: 113 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKPQFQSI 171
VATPGR+ DH ++TE L S V LVLDE DR+++ G+E+DI + + +L + + + +
Sbjct: 288 VATPGRMADHLENTEALDLSNVRWLVLDEGDRLMELGFEQDIQKIISVLNLRSRKRVEKP 347
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
+ T C T +K Q ++
Sbjct: 348 VPGLPERRTTVLCSAT----------------------------------IKSNVEQLRA 373
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
+ L ++ AV D D ++ P LKQ + + PPK RLV
Sbjct: 374 ISLKDPVSIAVDS------------DPTAEGDGEAIENNFSAPAQLKQGYAIVPPKQRLV 421
Query: 292 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKE 340
L + + K Q + K +VFM+ D D+H ELL+ K +++
Sbjct: 422 TLVATL--KQQFKRKGSVLKCIVFMSCADSVDFHFELLTRGDKTAAVED 468
>gi|255953689|ref|XP_002567597.1| Pc21g05510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589308|emb|CAP95448.1| Pc21g05510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 766
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 214/628 (34%), Positives = 318/628 (50%), Gaps = 97/628 (15%)
Query: 361 ISSLFQNNPDI--PNVP-----TRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNIT 413
+SSLF +NP+ P P KP + L G+ P + +L + +
Sbjct: 106 VSSLFTSNPEARNPEEPKEDREAEDAKPTNAPLIDGLDTFTNLGLSPNLAAHLLTKLELK 165
Query: 414 QVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRP--------KISRK 464
T +Q+ SI +L + D ++++TGSGKTLAY +P++Q++ ++ ++ R
Sbjct: 166 APTAIQRSSITQLLKEESDAFIQAETGSGKTLAYLLPLVQRIMDLSKATNEHNDTQVHRD 225
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
G++A+I+ PTREL Q + + + WIV + GGEK KSEKAR+RKG++ILVAT
Sbjct: 226 SGLFAIILAPTRELCKQISVVLENILRCANWIVCGTVIGGEKKKSEKARLRKGLNILVAT 285
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKP-------- 575
PGRL+DH +TE L+ V LVLDE DR++D G+E ++ ++ L +Q+P
Sbjct: 286 PGRLVDHLDNTEALQVGNVRWLVLDEGDRLMDMGFEEELQGIVKKLDARQRPSRVPGVPT 345
Query: 576 QFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTD-----SLVIPDSLKQHFI 630
+ +IL SATL VQ+L ++L++ + I A S + T+ S +P LKQ +
Sbjct: 346 RRTTILCSATLKMNVQKLGEISLKDAVHIKADPSDEDEEKTNKDEEESFRVPAQLKQSYA 405
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS------------ 678
+ P KLRLV+L +++ K + + K +VFM+ D+ D+H EL S
Sbjct: 406 IVPAKLRLVSLTAYL--KRTFMRKGSVMKAIVFMSCADVVDFHFELFSRNQDREQQRKSD 463
Query: 679 ---------------------------TVLGENIAF---------FKLHGSMSQSERTEV 702
+ AF +LHGS+ Q+ RT
Sbjct: 464 EENKKDENDEKDEKDEKDEEKEKLSPHGTIAPGRAFSTPTNPVILHRLHGSLPQNVRTAT 523
Query: 703 FKTF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
+F RS ++ V+ICTDVA+RGLDLP VD +V+Y SS D+ HR+GRTARVG +G +L
Sbjct: 524 LGSFSRSTEACVMICTDVASRGLDLPNVDLVVEYDPAFSSDDHTHRIGRTARVGRDGRAL 583
Query: 762 LFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG------NVETA 814
+FL P E VE L+ +D + L L R G N E
Sbjct: 584 IFLQPGCEENYVEVLKR--------GYRDGGKALTRTDANEILKRGFGGNDNKKKNWEER 635
Query: 815 ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
T QM E L A + + S VR YA+++ R +FN K++HLGH AKSFAL
Sbjct: 636 TTDWQMDVERWALDNPDYLEMARRAFQSHVRAYATHTAAERSMFNIKELHLGHLAKSFAL 695
Query: 875 RDAPSVISGIG-KPKNKEELKNKKMAIN 901
RD P I+ G +P ++ K+ K A N
Sbjct: 696 RDRPGKINVPGLRPGQEDTKKDFKAARN 723
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 166/337 (49%), Gaps = 66/337 (19%)
Query: 7 TTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRP--------KISRKDG 57
T +Q+ SI +L + D ++++TGSGKTLAY +P++Q++ ++ ++ R G
Sbjct: 168 TAIQRSSITQLLKEESDAFIQAETGSGKTLAYLLPLVQRIMDLSKATNEHNDTQVHRDSG 227
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
++A+I+ PTREL Q + + + WIV + GGEK KSEKAR+RKG++ILVATPG
Sbjct: 228 LFAIILAPTRELCKQISVVLENILRCANWIVCGTVIGGEKKKSEKARLRKGLNILVATPG 287
Query: 118 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKPQFQSILLSAT 176
RL+DH +TE L+ V LVLDE DR++D G+E ++ ++ L +Q+P S +
Sbjct: 288 RLVDHLDNTEALQVGNVRWLVLDEGDRLMDMGFEEELQGIVKKLDARQRP---SRVPGVP 344
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
T C T + K+ + L +A I
Sbjct: 345 TRRTTILCSATLKMNVQKLGEISLKDAVHI------------------------------ 374
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTD---SLVIPDSLKQHFIVTPPKLRLVAL 293
+ D +D + D S +P LKQ + + P KLRLV+L
Sbjct: 375 ------------------KADPSDEDEEKTNKDEEESFRVPAQLKQSYAIVPAKLRLVSL 416
Query: 294 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K + + K +VFM+ D+ D+H EL S
Sbjct: 417 TAYL--KRTFMRKGSVMKAIVFMSCADVVDFHFELFS 451
>gi|361129692|gb|EHL01580.1| putative ATP-dependent RNA helicase dbp7 [Glarea lozoyensis 74030]
Length = 589
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 285/544 (52%), Gaps = 75/544 (13%)
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR---PKISRKDGIYAVIILPTRELALQT 482
I D D ++++TGSGKTLAY +PI+++L M KI R GI+A+I+ PTREL Q
Sbjct: 2 IKDDSDAFIQAETGSGKTLAYLLPIVERLLAMSKGDAKIHRDSGIFAIILAPTRELCKQI 61
Query: 483 LEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSK 542
+ +L + WIV + + GGE +SEKAR+RKG++IL+ATPGRL DH +TE LK ++
Sbjct: 62 AGVLERLLRCAPWIVGTTVIGGESKQSEKARLRKGVNILIATPGRLSDHLDNTEVLKVAQ 121
Query: 543 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ---------------SILLSATLT 587
V LVLDE DR+++ G+E +I +E +++ + + ++L SAT+
Sbjct: 122 VRWLVLDEGDRLMELGFEEEIKGIVERVRRSSLRVETLNGIDLTALPKRRITVLCSATMK 181
Query: 588 PAVQRLAGMTLQNP--IQIDAADSTDI-------HNTTDSLVIPDSLKQHFIVTPPKLRL 638
VQRL ++L + IQ D AD + P LKQ + V P KLRL
Sbjct: 182 MNVQRLGEISLTDAVHIQADPADEDTLKVLPAGDETEEKKFSAPAQLKQAYAVVPAKLRL 241
Query: 639 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS---------TVL-------G 682
V LAS + K K +VF++ D D+H + S TV+ G
Sbjct: 242 VTLASIL--KRAFARRGSVMKAIVFISCADSVDFHFSMFSRPPPPAEGDTVIERPELPKG 299
Query: 683 E-----------------NIAFFKLHGSMSQSERTEVFKTF-RSVKSGVLICTDVAARGL 724
E ++ +LHGS++Q+ RT K F +S + VLICTDVA+RGL
Sbjct: 300 ELTKDTIAHGTTFSSDTNSVVLHRLHGSLAQNIRTATLKAFTQSTEPCVLICTDVASRGL 359
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
DLP VD++++Y P S+ D++HRVGRTAR G EG +L+FL+P E + I I
Sbjct: 360 DLPNVDYVIEYDPPFSAEDHLHRVGRTARAGREGRALIFLLPGE-------EEEYISILA 412
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNV----ETAATALQMSFESAVLQQKILHTSACKGY 840
K+ + L+ DL R G E AT Q+ E + A +GY
Sbjct: 413 SGYKEG-KKALTHNTADDLLRKGFGGTGREWEERATEWQLEVERWTQESPKYLEMARRGY 471
Query: 841 TSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAI 900
S +R YA++ D RHIFN + +HLGH AK+FALRD P I G K ++ +A
Sbjct: 472 QSHIRAYATHVADERHIFNMQTLHLGHLAKAFALRDKPGSIKVPGLRPAKMTKADRSVAA 531
Query: 901 NKEK 904
K K
Sbjct: 532 RKAK 535
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 164/326 (50%), Gaps = 60/326 (18%)
Query: 17 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR---PKISRKDGIYAVIILPTRELALQT 73
I D D ++++TGSGKTLAY +PI+++L M KI R GI+A+I+ PTREL Q
Sbjct: 2 IKDDSDAFIQAETGSGKTLAYLLPIVERLLAMSKGDAKIHRDSGIFAIILAPTRELCKQI 61
Query: 74 LEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSK 133
+ +L + WIV + + GGE +SEKAR+RKG++IL+ATPGRL DH +TE LK ++
Sbjct: 62 AGVLERLLRCAPWIVGTTVIGGESKQSEKARLRKGVNILIATPGRLSDHLDNTEVLKVAQ 121
Query: 134 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFS 193
V LVLDE DR+++ G+E +I +E +++ + +++
Sbjct: 122 VRWLVLDEGDRLMELGFEEEIKGIVERVRRSSLRVETL---------------------- 159
Query: 194 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNP 253
G + L L K++ +VL SAT+ VQRL ++L +
Sbjct: 160 ---------------NGID------LTALPKRR---ITVLCSATMKMNVQRLGEISLTDA 195
Query: 254 --IQIDAADSTDI-------HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
IQ D AD + P LKQ + V P KLRLV LAS + K
Sbjct: 196 VHIQADPADEDTLKVLPAGDETEEKKFSAPAQLKQAYAVVPAKLRLVTLASIL--KRAFA 253
Query: 305 NEDEESKMLVFMATQDMADYHTELLS 330
K +VF++ D D+H + S
Sbjct: 254 RRGSVMKAIVFISCADSVDFHFSMFS 279
>gi|255731260|ref|XP_002550554.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131563|gb|EER31122.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 708
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 209/613 (34%), Positives = 330/613 (53%), Gaps = 64/613 (10%)
Query: 361 ISSLFQNNPDIPNVPTRR---LKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTT 417
+SSLF N+ I + PT + P + + T++ G++ + +L E + T
Sbjct: 108 VSSLFTNSEVITSKPTTKEVTYLPSNAPIKDATTFAGL-GLNDKLSSHLTEHLRFKYPTK 166
Query: 418 VQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQ-EMRPKISRKDGIYAVIILPT 475
+QQL I ++ D+ V++QTGSGKTL++ +P+ KL E + KI+R+ G++ +I+ PT
Sbjct: 167 IQQLVIPNLITTNQDLFVKAQTGSGKTLSFVLPMFHKLMMENKYKINRESGLFGIILTPT 226
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA Q + L + IVP + GGEK KSEKAR+RKG +ILVATPGRL DH ++T
Sbjct: 227 RELATQIYGVLETLTRCHHHIVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHLENT 286
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFL----------EILKKQK--PQFQ-SILL 582
+ L S++ L+LDE D++++ G+E I++ E L K + P + ++L
Sbjct: 287 KNLDVSQLRWLILDEGDKLMELGFEETISKITSQIDANSKINETLDKWQGLPNKRINMLC 346
Query: 583 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT-----TDSL--VIPDSLKQHFIVTPPK 635
SATL V++L + L NP I ++ T T+ L PD L Q+ +V PPK
Sbjct: 347 SATLQSNVKKLGSIVLNNPEMISVDSFKNVPGTITFGETEELRSTAPDQLVQNVLVVPPK 406
Query: 636 LRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST---------------V 680
LRLV L + +L K S +VF + D DYH ++ + +
Sbjct: 407 LRLVTLDA-LLAKVS-------STTMVFFSCSDSVDYHFDVFTRSEKESTDDAKGVDAPL 458
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTF---RSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
LG N +KLHGS+SQ RT ++F + K+ +L CTDVA+RGLDLP + +V++
Sbjct: 459 LGPNTVVYKLHGSLSQQARTTTLQSFIKDNTTKTKILFCTDVASRGLDLPNIANVVEFDP 518
Query: 738 PSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSV 797
P + D++HR+GRTAR+G++G++ LFL+P + + + + + +E L+ +QN V
Sbjct: 519 PFTIDDHLHRIGRTARLGNQGTATLFLLPGSEEGYVDGKLKVVHPKEGSLR--IQNYEEV 576
Query: 798 KMEGDLSRLAD-------GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASY 850
+G + +D G + AT + E +L+ + + + A + +TS +R YA++
Sbjct: 577 LQQG-FAEGSDKSKDNKIGKWDIHATTWHLDVERWLLEDQAMLSKAIQAFTSHIRAYATH 635
Query: 851 SKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS-GIGKPKNKEELKNKKMAINKEKSFKQR 909
R FN K +HLGH AKSF LR+ P + +G N E K K K+K +
Sbjct: 636 LSSEREFFNVKLLHLGHLAKSFGLRETPKKLGKSVGNNSNFTESKRGKKEDPKKKMLRM- 694
Query: 910 GNFSKKQMLSEFD 922
+ K SEF+
Sbjct: 695 AKMAVKASSSEFN 707
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%), Gaps = 2/152 (1%)
Query: 7 TTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQ-EMRPKISRKDGIYAVIIL 64
T +QQL I ++ D+ V++QTGSGKTL++ +P+ KL E + KI+R+ G++ +I+
Sbjct: 165 TKIQQLVIPNLITTNQDLFVKAQTGSGKTLSFVLPMFHKLMMENKYKINRESGLFGIILT 224
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q + L + IVP + GGEK KSEKAR+RKG +ILVATPGRL DH +
Sbjct: 225 PTRELATQIYGVLETLTRCHHHIVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHLE 284
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAE 156
+T+ L S++ L+LDE D++++ G+E I++
Sbjct: 285 NTKNLDVSQLRWLILDEGDKLMELGFEETISK 316
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 28/170 (16%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL----------EILKKQK--PQFQ-S 231
++T+ L S++ L+LDE D++++ G+E I++ E L K + P + +
Sbjct: 284 ENTKNLDVSQLRWLILDEGDKLMELGFEETISKITSQIDANSKINETLDKWQGLPNKRIN 343
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT-----TDSL--VIPDSLKQHFIVT 284
+L SATL V++L + L NP I ++ T T+ L PD L Q+ +V
Sbjct: 344 MLCSATLQSNVKKLGSIVLNNPEMISVDSFKNVPGTITFGETEELRSTAPDQLVQNVLVV 403
Query: 285 PPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKK 334
PPKLRLV L + +L K S +VF + D DYH ++ + +K
Sbjct: 404 PPKLRLVTLDA-LLAKVS-------STTMVFFSCSDSVDYHFDVFTRSEK 445
>gi|327354386|gb|EGE83243.1| ATP-dependent RNA helicase DBP7 [Ajellomyces dermatitidis ATCC
18188]
Length = 786
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 315/625 (50%), Gaps = 105/625 (16%)
Query: 361 ISSLFQNNPDIPNVPTRRLKP-VSEALFAPTSYEEFP-----------GIHPFMKKNLNE 408
ISSLF NP P ++P ++ P+ P G+ P + +L
Sbjct: 130 ISSLFSFNP----APLSAIEPPKTDEGAEPSKPSNAPLIDGIDTFTSLGLSPMLAAHLMT 185
Query: 409 GMNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---------- 457
+ T VQ+ +I +L + D +++QTGSGKTLAY +P++Q+L +
Sbjct: 186 KLEFKAPTAVQKSAISQLLKEECDAFIQAQTGSGKTLAYLLPLVQRLINLSSTNGKAFER 245
Query: 458 ------RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ R G++A+I+ PTREL Q + +L + WIV + GGEK KSEK
Sbjct: 246 TSDGSDNAAVHRDSGLFAIILAPTRELCKQISVVLEQLLRCAHWIVAGTVIGGEKKKSEK 305
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL- 570
AR+RKG++ILVATPGRL DH ++T+ L S V LVLDE DR++D G+E +I ++ L
Sbjct: 306 ARLRKGLNILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIVKRLD 365
Query: 571 KKQKPQFQS--------ILLSATLTPAVQRLAGMTLQNPIQI-----DAADSTDIHNT-T 616
++QK + S IL SATL VQRL ++L++ + + D D T +NT T
Sbjct: 366 ERQKSKGISGLPAKRVTILCSATLKMNVQRLGEISLKDAVHVQADPDDEDDETKTNNTGT 425
Query: 617 DS-LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 675
+S +P LKQ + V KLRLV L + + K + K ++F++ D D+H E
Sbjct: 426 NSEFSVPAQLKQSYAVVAAKLRLVTLTALM--KRTFARKGSVMKAIIFVSCADSVDFHFE 483
Query: 676 LLSTVLGEN-------------------------------------IAFFKLHGSMSQSE 698
S +N + +KLHGS+ Q
Sbjct: 484 AFSRQDSDNKSGGKELKNTEALLPTKPASIHGTVAQATAFSNPTNPVTIYKLHGSLPQHV 543
Query: 699 RTEVFKTF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
RT F R ++ VLICTDVAARGLDLP VD++V+Y SS D++HR+GRTAR+G +
Sbjct: 544 RTSTLSAFSRQGEAAVLICTDVAARGLDLPNVDFVVEYDPAFSSDDHLHRIGRTARLGRD 603
Query: 758 GSSLLFLIP-SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA-- 814
G + +FL+P +E K VE L+ +D + + + L R GN E+
Sbjct: 604 GRAHIFLLPGNEEKYVEILKR--------GYRDGGTKISCIDVNESLKRGFGGNTESTSK 655
Query: 815 -----ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
AT Q+ E L+ + A + Y S +R YA++ R +FN K +HLGH A
Sbjct: 656 GWEEKATEWQLDIERWALENPTILEMARRAYQSHIRAYATHIASERDMFNIKDLHLGHLA 715
Query: 870 KSFALRDAPSVISGIGKPKNKEELK 894
KSFALRD P+ I+ G KE+ K
Sbjct: 716 KSFALRDRPAKINVPGLRPRKEDTK 740
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 163/342 (47%), Gaps = 66/342 (19%)
Query: 7 TTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM----------------R 49
T VQ+ +I +L + D +++QTGSGKTLAY +P++Q+L +
Sbjct: 193 TAVQKSAISQLLKEECDAFIQAQTGSGKTLAYLLPLVQRLINLSSTNGKAFERTSDGSDN 252
Query: 50 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 109
+ R G++A+I+ PTREL Q + +L + WIV + GGEK KSEKAR+RKG+
Sbjct: 253 AAVHRDSGLFAIILAPTRELCKQISVVLEQLLRCAHWIVAGTVIGGEKKKSEKARLRKGL 312
Query: 110 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-KKQKPQF 168
+ILVATPGRL DH ++T+ L S V LVLDE DR++D G+E +I ++ L ++QK +
Sbjct: 313 NILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIVKRLDERQKSKG 372
Query: 169 QSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
S L + + T C T + ++ + L +A
Sbjct: 373 ISGLPAKRV---TILCSATLKMNVQRLGEISLKDA------------------------- 404
Query: 229 FQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 288
V + A +P D T+ T +P LKQ + V KL
Sbjct: 405 ---VHVQA---------------DPDDEDDETKTNNTGTNSEFSVPAQLKQSYAVVAAKL 446
Query: 289 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
RLV L + + K + K ++F++ D D+H E S
Sbjct: 447 RLVTLTALM--KRTFARKGSVMKAIIFVSCADSVDFHFEAFS 486
>gi|261201938|ref|XP_002628183.1| ATP-dependent RNA helicase DBP7 [Ajellomyces dermatitidis SLH14081]
gi|239590280|gb|EEQ72861.1| ATP-dependent RNA helicase DBP7 [Ajellomyces dermatitidis SLH14081]
Length = 786
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 315/625 (50%), Gaps = 105/625 (16%)
Query: 361 ISSLFQNNPDIPNVPTRRLKP-VSEALFAPTSYEEFP-----------GIHPFMKKNLNE 408
ISSLF NP P ++P ++ P+ P G+ P + +L
Sbjct: 130 ISSLFSFNP----APLSAVEPPKTDEGAEPSKPSNAPLIDGIDTFTSLGLSPMLAAHLMT 185
Query: 409 GMNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---------- 457
+ T VQ+ +I +L + D +++QTGSGKTLAY +P++Q+L +
Sbjct: 186 KLEFKAPTAVQKSAISQLLKEECDAFIQAQTGSGKTLAYLLPLVQRLINLSSTNGKAFER 245
Query: 458 ------RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ R G++A+I+ PTREL Q + +L + WIV + GGEK KSEK
Sbjct: 246 TSDGSDNAAVHRDSGLFAIILAPTRELCKQISVVLEQLLRCAHWIVAGTVIGGEKKKSEK 305
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL- 570
AR+RKG++ILVATPGRL DH ++T+ L S V LVLDE DR++D G+E +I ++ L
Sbjct: 306 ARLRKGLNILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIVKRLD 365
Query: 571 KKQKPQFQS--------ILLSATLTPAVQRLAGMTLQNPIQI-----DAADSTDIHNT-T 616
++QK + S IL SATL VQRL ++L++ + + D D T +NT T
Sbjct: 366 ERQKSKGISGLPAKRVTILCSATLKMNVQRLGEISLKDAVHVQADPDDEDDETKTNNTGT 425
Query: 617 DS-LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 675
+S +P LKQ + V KLRLV L + + K + K ++F++ D D+H E
Sbjct: 426 NSEFSVPAQLKQSYAVVAAKLRLVTLTALM--KRTFARKGSVMKAIIFVSCADSVDFHFE 483
Query: 676 LLSTVLGEN-------------------------------------IAFFKLHGSMSQSE 698
S +N + +KLHGS+ Q
Sbjct: 484 AFSRQDSDNKSGGKELKNTEALLPTKPASIHGTVAQATAFSNPTNPVTIYKLHGSLPQHV 543
Query: 699 RTEVFKTF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
RT F R ++ VLICTDVAARGLDLP VD++V+Y SS D++HR+GRTAR+G +
Sbjct: 544 RTSTLSAFSRQGEAAVLICTDVAARGLDLPNVDFVVEYDPAFSSDDHLHRIGRTARLGRD 603
Query: 758 GSSLLFLIP-SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA-- 814
G + +FL+P +E K VE L+ +D + + + L R GN E+
Sbjct: 604 GRAHIFLLPGNEEKYVEILKR--------GYRDGGTKISCIDVNESLKRGFGGNTESTSK 655
Query: 815 -----ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
AT Q+ E L+ + A + Y S +R YA++ R +FN K +HLGH A
Sbjct: 656 GWEEKATEWQLDIERWALENPTILEMARRAYQSHIRAYATHIASERDMFNIKDLHLGHLA 715
Query: 870 KSFALRDAPSVISGIGKPKNKEELK 894
KSFALRD P+ I+ G KE+ K
Sbjct: 716 KSFALRDRPAKINVPGLRPGKEDTK 740
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 163/342 (47%), Gaps = 66/342 (19%)
Query: 7 TTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM----------------R 49
T VQ+ +I +L + D +++QTGSGKTLAY +P++Q+L +
Sbjct: 193 TAVQKSAISQLLKEECDAFIQAQTGSGKTLAYLLPLVQRLINLSSTNGKAFERTSDGSDN 252
Query: 50 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 109
+ R G++A+I+ PTREL Q + +L + WIV + GGEK KSEKAR+RKG+
Sbjct: 253 AAVHRDSGLFAIILAPTRELCKQISVVLEQLLRCAHWIVAGTVIGGEKKKSEKARLRKGL 312
Query: 110 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-KKQKPQF 168
+ILVATPGRL DH ++T+ L S V LVLDE DR++D G+E +I ++ L ++QK +
Sbjct: 313 NILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIVKRLDERQKSKG 372
Query: 169 QSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
S L + + T C T + ++ + L +A
Sbjct: 373 ISGLPAKRV---TILCSATLKMNVQRLGEISLKDA------------------------- 404
Query: 229 FQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 288
V + A +P D T+ T +P LKQ + V KL
Sbjct: 405 ---VHVQA---------------DPDDEDDETKTNNTGTNSEFSVPAQLKQSYAVVAAKL 446
Query: 289 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
RLV L + + K + K ++F++ D D+H E S
Sbjct: 447 RLVTLTALM--KRTFARKGSVMKAIIFVSCADSVDFHFEAFS 486
>gi|239611993|gb|EEQ88980.1| ATP-dependent RNA helicase DBP7 [Ajellomyces dermatitidis ER-3]
Length = 786
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 216/625 (34%), Positives = 315/625 (50%), Gaps = 105/625 (16%)
Query: 361 ISSLFQNNPDIPNVPTRRLKP-VSEALFAPTSYEEFP-----------GIHPFMKKNLNE 408
ISSLF NP P ++P ++ P+ P G+ P + +L
Sbjct: 130 ISSLFSFNP----APLSAIEPPKTDEGAEPSKPSNAPLIDGIDTFTSLGLSPMLAAHLMT 185
Query: 409 GMNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---------- 457
+ T VQ+ +I +L + D +++QTGSGKTLAY +P++Q+L +
Sbjct: 186 KLEFKAPTAVQKSAISQLLKEECDAFIQAQTGSGKTLAYLLPLVQRLINLSSTNGKAFER 245
Query: 458 ------RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ R G++A+I+ PTREL Q + +L + WIV + GGEK KSEK
Sbjct: 246 TSDGSDNAAVHRDSGLFAIILAPTRELCKQISVVLEQLLRCAHWIVAGTVIGGEKKKSEK 305
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL- 570
AR+RKG++ILVATPGRL DH ++T+ L S V LVLDE DR++D G+E +I ++ L
Sbjct: 306 ARLRKGLNILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIVKRLD 365
Query: 571 KKQKPQFQS--------ILLSATLTPAVQRLAGMTLQNPIQI-----DAADSTDIHNT-T 616
++QK + S IL SATL VQRL ++L++ + + D D T +NT T
Sbjct: 366 ERQKSKGISGLPAKRVTILCSATLKMNVQRLGEISLKDAVHVQADPDDEDDETKTNNTGT 425
Query: 617 DS-LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 675
+S +P LKQ + V KLRLV L + + K + K ++F++ D D+H E
Sbjct: 426 NSEFSVPAQLKQSYAVVAAKLRLVTLTALM--KRTFARKGSVMKAIIFVSCADSVDFHFE 483
Query: 676 LLSTVLGEN-------------------------------------IAFFKLHGSMSQSE 698
S +N + +KLHGS+ Q
Sbjct: 484 AFSRQDSDNKSGGKELKNTEALLPTKPASIHGTVAQATAFSNPTNPVTIYKLHGSLPQHV 543
Query: 699 RTEVFKTF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
RT F R ++ VLICTDVAARGLDLP VD++V+Y SS D++HR+GRTAR+G +
Sbjct: 544 RTSTLSAFSRQGEAAVLICTDVAARGLDLPNVDFVVEYDPAFSSDDHLHRIGRTARLGRD 603
Query: 758 GSSLLFLIP-SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA-- 814
G + +FL+P +E K VE L+ +D + + + L R GN E+
Sbjct: 604 GRAHIFLLPGNEEKYVEILKR--------GYRDGGTKISCIDVNESLKRGFGGNTESTSK 655
Query: 815 -----ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
AT Q+ E L+ + A + Y S +R YA++ R +FN K +HLGH A
Sbjct: 656 GWEEKATEWQLDIERWALENPTILEMARRAYQSHIRAYATHIASERDMFNIKDLHLGHLA 715
Query: 870 KSFALRDAPSVISGIGKPKNKEELK 894
KSFALRD P+ I+ G KE+ K
Sbjct: 716 KSFALRDRPAKINVPGLRPRKEDTK 740
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 163/342 (47%), Gaps = 66/342 (19%)
Query: 7 TTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM----------------R 49
T VQ+ +I +L + D +++QTGSGKTLAY +P++Q+L +
Sbjct: 193 TAVQKSAISQLLKEECDAFIQAQTGSGKTLAYLLPLVQRLINLSSTNGKAFERTSDGSDN 252
Query: 50 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 109
+ R G++A+I+ PTREL Q + +L + WIV + GGEK KSEKAR+RKG+
Sbjct: 253 AAVHRDSGLFAIILAPTRELCKQISVVLEQLLRCAHWIVAGTVIGGEKKKSEKARLRKGL 312
Query: 110 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-KKQKPQF 168
+ILVATPGRL DH ++T+ L S V LVLDE DR++D G+E +I ++ L ++QK +
Sbjct: 313 NILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIVKRLDERQKSKG 372
Query: 169 QSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
S L + + T C T + ++ + L +A
Sbjct: 373 ISGLPAKRV---TILCSATLKMNVQRLGEISLKDA------------------------- 404
Query: 229 FQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 288
V + A +P D T+ T +P LKQ + V KL
Sbjct: 405 ---VHVQA---------------DPDDEDDETKTNNTGTNSEFSVPAQLKQSYAVVAAKL 446
Query: 289 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
RLV L + + K + K ++F++ D D+H E S
Sbjct: 447 RLVTLTALM--KRTFARKGSVMKAIIFVSCADSVDFHFEAFS 486
>gi|410074665|ref|XP_003954915.1| hypothetical protein KAFR_0A03450 [Kazachstania africana CBS 2517]
gi|372461497|emb|CCF55780.1| hypothetical protein KAFR_0A03450 [Kazachstania africana CBS 2517]
Length = 744
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 208/618 (33%), Positives = 316/618 (51%), Gaps = 83/618 (13%)
Query: 361 ISSLFQNNPDIP---NVPTRRLKPVSEALFAPTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N I N + V A AP + F GI + +L E M I +
Sbjct: 116 VSSLFTSNRQIETSVNSNAQNEDTVVTASNAPLLDDSFESLGIKEPILSHLIEKMRIKKP 175
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+L++ + G D+ + SQTGSGKTL+Y +PI + M ++ RK G +A+II
Sbjct: 176 TSIQKLAVPNLSSKGSDNDLFIHSQTGSGKTLSYLLPIFSSILNMNERVDRKSGCFALII 235
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 236 APTRELASQIYHVASTLANCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRILDHL 295
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK------KQKPQFQS---- 579
++T+ ++ + + ++VLDE D++++ G+E + + +EI+ K P
Sbjct: 296 QNTKVIREQLAATLRYVVLDEGDKLMELGFEETVRQIMEIIHSVDLDTKMYPALPHRIIR 355
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAAD---STDIHNTTDSLVIPDSLKQHFIVTPPKL 636
+L SAT+ V +L + L+N I ++ S++ TT V PD L Q + PPKL
Sbjct: 356 VLCSATINDVVSKLGKVALKNNKLISNSNTKGSSEKEETTQ--VAPDQLLQKITIVPPKL 413
Query: 637 RLVALASFILG---KCQNVNEDEESKMLVFMATQDMADYHTELLSTV------------- 680
RLV L + ++ K N + + +VF++ D D+H E S+
Sbjct: 414 RLVTLGATLINITKKDLTRNHKKLLRTMVFLSCSDSVDFHYEAFSSTDSNYRNLVGDTVR 473
Query: 681 -----------LGE----NIAFFKLHGSMSQSERTEVFKTFRSVKSG------VLICTDV 719
GE NI +KLHGS+SQ RT K F + ++ CTDV
Sbjct: 474 LLTKGNGTLPNAGEDQDPNIICYKLHGSLSQQIRTSTLKHFATDNEATNGKHLIMFCTDV 533
Query: 720 AARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE-------VKLV 772
A+RGLDLP V +++ P S D++HR+GRTAR G G SLLFL+P E ++
Sbjct: 534 ASRGLDLPYVGTVIEMDPPFSVDDHLHRIGRTARAGKSGESLLFLLPGEEEGYMDYIRKY 593
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV-------ETAATALQMSFESA 825
+ + ++ +E LK N M+ D + L D N +T AT ++ E
Sbjct: 594 HPMGWKLLKFDEDILKPSFSN-----MKVDRNDLGDKNNNKASLEWDTNATTWHLNIERH 648
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS-GI 884
VL+ A KGY+S +R YA++ + FN K +HLGH AKSFALR+ P +
Sbjct: 649 VLEDSSFKDLAMKGYSSHIRAYATHVSVEKQFFNVKYVHLGHLAKSFALRERPKAMGLNA 708
Query: 885 GKPKNKEELKNKKMAINK 902
K +N E +K+ + NK
Sbjct: 709 SKQQNSENRPSKENSKNK 726
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 174/343 (50%), Gaps = 65/343 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+L++ + G D+ + SQTGSGKTL+Y +PI + M ++ RK G
Sbjct: 170 MRIKKPTSIQKLAVPNLSSKGSDNDLFIHSQTGSGKTLSYLLPIFSSILNMNERVDRKSG 229
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A+II PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 230 CFALIIAPTRELASQIYHVASTLANCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 289
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ ++ + + ++VLDE D++++ G+E + + +EI+ S+ L
Sbjct: 290 RILDHLQNTKVIREQLAATLRYVVLDEGDKLMELGFEETVRQIMEII-------HSVDLD 342
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ PA + H ++ VL
Sbjct: 343 TKMYPA--------------LPHRII------------------------------RVLC 358
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAAD---STDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
SAT+ V +L + L+N I ++ S++ TT V PD L Q + PPKLRLV
Sbjct: 359 SATINDVVSKLGKVALKNNKLISNSNTKGSSEKEETTQ--VAPDQLLQKITIVPPKLRLV 416
Query: 292 ALASFILG---KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
L + ++ K N + + +VF++ D D+H E S+
Sbjct: 417 TLGATLINITKKDLTRNHKKLLRTMVFLSCSDSVDFHYEAFSS 459
>gi|123485129|ref|XP_001324425.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121907307|gb|EAY12202.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 596
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 197/600 (32%), Positives = 313/600 (52%), Gaps = 93/600 (15%)
Query: 366 QNNPDIPNVPTRR---LKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLS 422
Q NP+ T + ++ ++E LF+ ++ + F ++P + L + M I + T +Q S
Sbjct: 6 QQNPEQTEQKTEQTVTVEEITEGLFSESTIDAFE-LNPRLISALKK-MKIDKFTNIQTES 63
Query: 423 IQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK----ISRKDGIYAVIILPTREL 478
I PI+ G DVL+R+ TGSGKTLAY +PI+ +L P+ I R G A++I PTREL
Sbjct: 64 IPPIISGSDVLMRADTGSGKTLAYLLPIMHRLATDFPRDTNPIRRDMGCLAIVIAPTREL 123
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETL 538
LQ + L +++ L GGEK++SEK R+RKGI++L+ATPGRLL H ++++ L
Sbjct: 124 CLQIETVVQDLRSQMNFVISGSLLGGEKVQSEKKRLRKGINLLIATPGRLLYHLQNSQNL 183
Query: 539 KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------PQFQSILLSATLTPAVQR 592
+ ++ LVLDEADR+LD G+ + +AE +EI+ + + P Q+IL+SATL +
Sbjct: 184 YVNNLKFLVLDEADRLLDMGFGKKVAEIIEIINQAQNKVDDNPVHQTILVSATLPKELHS 243
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
L + L P ++ + IP +L Q F+ K RLVALA+ + + +
Sbjct: 244 LTEIALYKPTEVGIMQD-------EKFSIPQTLLQRFVTVDAKWRLVALATLLK---RYM 293
Query: 653 NEDEESKMLVFMATQDMADYHTELL----------------------------------- 677
E+ E+K +VF++ D+H
Sbjct: 294 IEEPETKAIVFLSCCKSVDFHASFFSFFNFMTPEERAQKKIPQRNYKGPNPNAEENKPTI 353
Query: 678 -----STVLGENIAF--------FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
ST E AF F++HG++ Q ER++ F + KS ++ CTDVAARGL
Sbjct: 354 RDTHASTDNDEVGAFSQFFNCPVFRIHGNVDQIERSKTISKFTAAKSAIMFCTDVAARGL 413
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
D+P + I+QY P + DYVHRVGRTAR+GH+G S LFL +E+ ++ L++R+++I+
Sbjct: 414 DIPNISVIIQYDPPVDTEDYVHRVGRTARIGHDGISYLFLQQNELGFIDLLRDRKVQIKP 473
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
K ++ ++ +G + L D A + +FE ++ L +A + + + +
Sbjct: 474 YKYEE-------LQRKGVAAMLGDNPNLCFAAMRKETFE--CVKTNDLEMAAGQAWAASI 524
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI-----------SGIGKPKNKEEL 893
Y S+ K R IF + +HLGH A +F L P+ I I KP K+E+
Sbjct: 525 AAYTSHHKTTRSIFRAQALHLGHLATAFGLEKTPAEIKEMLHEDRDLQESINKPTEKKEM 584
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 123/187 (65%), Gaps = 10/187 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK----ISRKD 56
M I + T +Q SI PI+ G DVL+R+ TGSGKTLAY +PI+ +L P+ I R
Sbjct: 51 MKIDKFTNIQTESIPPIISGSDVLMRADTGSGKTLAYLLPIMHRLATDFPRDTNPIRRDM 110
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G A++I PTREL LQ + L +++ L GGEK++SEK R+RKGI++L+ATP
Sbjct: 111 GCLAIVIAPTRELCLQIETVVQDLRSQMNFVISGSLLGGEKVQSEKKRLRKGINLLIATP 170
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------PQFQS 170
GRLL H ++++ L + ++ LVLDEADR+LD G+ + +AE +EI+ + + P Q+
Sbjct: 171 GRLLYHLQNSQNLYVNNLKFLVLDEADRLLDMGFGKKVAEIIEIINQAQNKVDDNPVHQT 230
Query: 171 ILLSATL 177
IL+SATL
Sbjct: 231 ILVSATL 237
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK----- 226
LL AT ++++ L + ++ LVLDEADR+LD G+ + +AE +EI+ + +
Sbjct: 165 LLIATPGRLLYHLQNSQNLYVNNLKFLVLDEADRLLDMGFGKKVAEIIEIINQAQNKVDD 224
Query: 227 -PQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTP 285
P Q++L+SATL + L + L P ++ + IP +L Q F+
Sbjct: 225 NPVHQTILVSATLPKELHSLTEIALYKPTEVGIMQD-------EKFSIPQTLLQRFVTVD 277
Query: 286 PKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
K RLVALA+ + + + E+ E+K +VF++ D+H S
Sbjct: 278 AKWRLVALATLLK---RYMIEEPETKAIVFLSCCKSVDFHASFFS 319
>gi|45198600|ref|NP_985629.1| AFR082Cp [Ashbya gossypii ATCC 10895]
gi|74692928|sp|Q754J2.1|DBP7_ASHGO RecName: Full=ATP-dependent RNA helicase DBP7
gi|44984551|gb|AAS53453.1| AFR082Cp [Ashbya gossypii ATCC 10895]
gi|374108859|gb|AEY97765.1| FAFR082Cp [Ashbya gossypii FDAG1]
Length = 710
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 299/562 (53%), Gaps = 68/562 (12%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQ 455
G+ + ++L M I + T +Q+++I +L+G D+ + +QTGSGKTLA+ +P++Q L
Sbjct: 140 GVRGTLLEHLTGKMKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPVLQTLL 199
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
+ +I R G +A+I+ PTRELA Q + + L + ++VP L GGE+ KSEKAR+R
Sbjct: 200 SLEQRIDRHSGCFAMIVTPTRELAAQIYGVISTLAQCCHYLVPCLLVGGERKKSEKARLR 259
Query: 516 KGISILVATPGRLLDHCKHT----ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
KG + +V TPGR+LDH ++T E L S + +L+LDE D++++ G+E + LEI+
Sbjct: 260 KGANFIVGTPGRMLDHLQNTKVAREQLPHS-LRYLILDEGDKLMELGFEETLKSILEIVH 318
Query: 572 K---------QKPQ-FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVI 621
+ PQ +L SAT V +L + L +P I A+DST TD +
Sbjct: 319 SVACDNTRFPRLPQRIVHVLCSATRQGTVSKLGDIALTDPKVIAASDST-----TDVSTV 373
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
PD L Q + PPKLRLV L + I + + ++ +VF++ D D+H ++ S +
Sbjct: 374 PDQLLQKIAIVPPKLRLVTLCAAISELSRKAPTETTTRTIVFISCADSVDFHYDVFSGLG 433
Query: 682 GE----------------------------NIAFFKLHGSMSQSERTEVFKTFRSVKSG- 712
G N F+KLHGS+ Q+ R + F S +
Sbjct: 434 GSHRDLVPGTVRELAAGSRALPCFSADSPPNTVFYKLHGSLPQAVRVATLRHFSSDAAAT 493
Query: 713 -----VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
VL CTDVA+RGLDLP V +++ P + D++HR+GRTAR G G SLLFL+P
Sbjct: 494 RGKHLVLFCTDVASRGLDLPRVSTVIEMDPPFAVEDHLHRIGRTARAGVAGESLLFLLPG 553
Query: 768 EVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR------LADGNVETAATALQM 820
E + +E ++ R E+ D ++LL+ ++R D ++ AT +
Sbjct: 554 EEEGYMEHIRAHHPRGWELLRYD--RDLLAPAFAAPVARSDRPTTATDAAWDSNATTWHL 611
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ E VL+ A KGYTS +R YA++ + FN + +HLGH AK+F LR+ P
Sbjct: 612 NVERRVLEDPSAKDLAIKGYTSHIRAYATHISQEKRFFNVRCLHLGHLAKAFGLRERPKG 671
Query: 881 ISG-IGK---PKNKEELKNKKM 898
++ GK PK K++ KM
Sbjct: 672 MAAHRGKPATPKPKQDDARTKM 693
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 173/335 (51%), Gaps = 62/335 (18%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 59
M I + T +Q+++I +L+G D+ + +QTGSGKTLA+ +P++Q L + +I R G +
Sbjct: 153 MKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPVLQTLLSLEQRIDRHSGCF 212
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
A+I+ PTRELA Q + + L + ++VP L GGE+ KSEKAR+RKG + +V TPGR+
Sbjct: 213 AMIVTPTRELAAQIYGVISTLAQCCHYLVPCLLVGGERKKSEKARLRKGANFIVGTPGRM 272
Query: 120 LDHCKHT----ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
LDH ++T E L S + +L+LDE D++++ G+E + LEI+
Sbjct: 273 LDHLQNTKVAREQLPHS-LRYLILDEGDKLMELGFEETLKSILEIVH------------- 318
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
+ C +T +F ++ ++ VL S
Sbjct: 319 -----SVACDNT---RFPRLPQRIV------------------------------HVLCS 340
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT V +L + L +P I A+DS TTD +PD L Q + PPKLRLV L +
Sbjct: 341 ATRQGTVSKLGDIALTDPKVIAASDS-----TTDVSTVPDQLLQKIAIVPPKLRLVTLCA 395
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
I + + ++ +VF++ D D+H ++ S
Sbjct: 396 AISELSRKAPTETTTRTIVFISCADSVDFHYDVFS 430
>gi|156841113|ref|XP_001643932.1| hypothetical protein Kpol_1016p14 [Vanderwaltozyma polyspora DSM
70294]
gi|160380628|sp|A7TNT1.1|DBP7_VANPO RecName: Full=ATP-dependent RNA helicase DBP7
gi|156114562|gb|EDO16074.1| hypothetical protein Kpol_1016p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 732
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 311/602 (51%), Gaps = 76/602 (12%)
Query: 388 APTSYEEFPG--IHPFMKKNLNEGMNITQVTTVQQLSIQPILD--GGDVLVRSQTGSGKT 443
AP + + F I + +LNE M I + T++Q+L + +L D+ + +QTGSGKT
Sbjct: 139 APLAADNFDSLKIEQQLVNHLNEKMRIQKPTSIQKLVLPQLLSSKNNDLFIHAQTGSGKT 198
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+A+PI+ K+ M+ ++ RK G +A+ I PTRELA Q + ++L ++VP L G
Sbjct: 199 LAFALPILSKILSMKTRVDRKSGCFAIFITPTRELATQIYHVLSELTNCCHYLVPCLLIG 258
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS---KVEHLVLDEADRILDQGYE 560
GE KSEKAR+RKG + ++ TPGR+LDH ++T+++K + ++VLDEAD++++ G+E
Sbjct: 259 GESKKSEKARLRKGCNFIIGTPGRILDHFQNTQSVKEQLAVSLRYVVLDEADKLMELGFE 318
Query: 561 RDIAEFLEILKKQK------PQFQS----ILLSATLTPAVQRLAGMTLQNPIQIDAADST 610
+ + L+++ PQ S IL SAT +V +L + LQN I + T
Sbjct: 319 ETLTDILKLIHDISLNTSVYPQLPSRIMHILCSATSKGSVTKLGNVALQNYKMISNSHVT 378
Query: 611 DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE------DEESKMLVFM 664
N ++ +PD L Q + PPKLRLV LA+ + + E D S+ +VF+
Sbjct: 379 ---NELENATVPDQLLQKIAIVPPKLRLVTLAATLDSIHRKHIEQKKKKLDYVSRTVVFL 435
Query: 665 ATQDMADYHTELLST-------VLGENIAF---------------------FKLHGSMSQ 696
+ D ++H E S+ ++GE+ +KLHGS+SQ
Sbjct: 436 SCSDSVNFHFEAFSSSDANHRNLVGESARLLTKGNDILPSFDPENDPDFICYKLHGSLSQ 495
Query: 697 SERTEVFKTFRSVKSG------VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
R+ + F VL CTDVA+RGLDLP + +++ P + D++HR+GR
Sbjct: 496 QIRSSTLQHFSKTNENVKGKHLVLFCTDVASRGLDLPEIGTVIELDPPFAVEDHLHRIGR 555
Query: 751 TARVGHEGSSLLFLIPSE-------VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
TAR G G SLLFL+P E +K + + LK QN+ + + +
Sbjct: 556 TARAGKHGESLLFLLPGEEEGYMEYIKPYHTKGWKLVNYTNDLLKPSFQNVNVKRSDKET 615
Query: 804 SRLADGNVE---TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
S+ NVE T AT ++ E VL+ A KGY S +R YA++ + FN
Sbjct: 616 SK----NVEEWDTNATTWHLNVERRVLEDSSFKDIAMKGYASHIRAYATHISKEKKFFNV 671
Query: 861 KQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSE 920
K +HLGH AKSFALR+ P + G+ KN E K K K F+ + KQ E
Sbjct: 672 KCLHLGHLAKSFALRERPKTM-GLQNTKNGGEAKKNSKESAKNKMFR-LARMAVKQSSGE 729
Query: 921 FD 922
F+
Sbjct: 730 FN 731
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 176/342 (51%), Gaps = 65/342 (19%)
Query: 1 MNITQVTTVQQLSIQPILD--GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 58
M I + T++Q+L + +L D+ + +QTGSGKTLA+A+PI+ K+ M+ ++ RK G
Sbjct: 163 MRIQKPTSIQKLVLPQLLSSKNNDLFIHAQTGSGKTLAFALPILSKILSMKTRVDRKSGC 222
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+A+ I PTRELA Q + ++L ++VP L GGE KSEKAR+RKG + ++ TPGR
Sbjct: 223 FAIFITPTRELATQIYHVLSELTNCCHYLVPCLLIGGESKKSEKARLRKGCNFIIGTPGR 282
Query: 119 LLDHCKHTETLKFS---KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
+LDH ++T+++K + ++VLDEAD++++ G+E + + L+++ I L+
Sbjct: 283 ILDHFQNTQSVKEQLAVSLRYVVLDEADKLMELGFEETLTDILKLI-------HDISLNT 335
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
++ P S++ H +L S
Sbjct: 336 SVYPQLP----------SRIMH----------------------------------ILCS 351
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT +V +L + LQN I + T N ++ +PD L Q + PPKLRLV LA+
Sbjct: 352 ATSKGSVTKLGNVALQNYKMISNSHVT---NELENATVPDQLLQKIAIVPPKLRLVTLAA 408
Query: 296 FILGKCQNVNE------DEESKMLVFMATQDMADYHTELLST 331
+ + E D S+ +VF++ D ++H E S+
Sbjct: 409 TLDSIHRKHIEQKKKKLDYVSRTVVFLSCSDSVNFHFEAFSS 450
>gi|367017404|ref|XP_003683200.1| hypothetical protein TDEL_0H01300 [Torulaspora delbrueckii]
gi|359750864|emb|CCE93989.1| hypothetical protein TDEL_0H01300 [Torulaspora delbrueckii]
Length = 715
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 213/645 (33%), Positives = 331/645 (51%), Gaps = 79/645 (12%)
Query: 349 EIPKKTEVKSGPI-SSLFQNNPDIP---NVPTRRLKPVSEALFAPTSYEEFP--GIHPFM 402
EI K V + I SSLF +N +I N V + AP S E F G+ +
Sbjct: 78 EIKKAAPVANAQIVSSLFTSNREISTSVNTNAHDEDAVKKPSNAPLSMETFESLGVQEML 137
Query: 403 KKNLNEGMNITQVTTVQQLSIQPIL-----DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+L + M I + T++Q+L +L GD+ + +QTGSGKTLAY +PI+ ++ M
Sbjct: 138 VSHLKDKMRIQKPTSIQKLVFSHMLLSGKSADGDLFINAQTGSGKTLAYLLPIVSRILRM 197
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
++ RK G +A+I+ PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG
Sbjct: 198 NVRVDRKSGCFALIVAPTRELASQIYSVASMLTNCCHYLVPCLLIGGERKKSEKARLRKG 257
Query: 518 ISILVATPGRLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK--- 571
+ ++ TPGR+LDH ++T+ ++ + + V+DE D++++ G+E I + L I+
Sbjct: 258 CNFIIGTPGRILDHLQNTKVIREQLSHSLRYFVMDEGDKLMELGFEETIRDILNIIHEVP 317
Query: 572 ---KQKPQFQS----ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDS 624
++ PQ + IL SAT+ +L + LQN I S I N P+
Sbjct: 318 VNTERFPQLPTRIVHILCSATMQNGAAKLGDVALQNYKLI---SSRKIENDDAITEAPEQ 374
Query: 625 LKQHFIVTPPKLRLVALAS---FILGKCQNVNEDEESKMLVFMATQDMADYHTELLST-- 679
L Q +V PPKLRLV LA+ I K + + + S+ +VF++ D ++H E ST
Sbjct: 375 LLQKIVVVPPKLRLVTLAAELDEIHRKHKQLQDGVTSRTMVFLSCSDSVEFHHETFSTND 434
Query: 680 -----VLGENIA---------------------FFKLHGSMSQSERTEVFKTF------R 707
++GE++ F+KLHGS+SQ RT ++F
Sbjct: 435 LYHRNLVGESVRLLDKGNNILPSFKSDEEPGVIFYKLHGSLSQPIRTSTLESFAKDTPTT 494
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
K ++ CTDVA+RGLDLP V +++ P S+ D++HRVGRTAR G G +LLFL+P
Sbjct: 495 KGKHLIMFCTDVASRGLDLPHVGTVLEVDPPFSTEDHLHRVGRTARAGQGGEALLFLLPG 554
Query: 768 E-------VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV---ETAATA 817
E +K + ++ ++ LK + + + + D + D V +T AT
Sbjct: 555 EEEGYLGKIKSYHPKGWKLLKYDDDLLKPAFEQVNVRRSDKDDKQ--DDTVLEWDTNATT 612
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
++ E VL+ + A K +TS +R YA++ + + FN K +HLGH AKSF LR+
Sbjct: 613 WHLNVERRVLEDSNFKSLAIKAFTSHIRAYATHISEEKPFFNIKFLHLGHLAKSFGLRER 672
Query: 878 PSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
P GIG +K+ KK N + + + K+ SEF+
Sbjct: 673 P---KGIGAQHSKDRDSVKKPKENSKNKMFRLARMAVKESASEFN 714
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 167/349 (47%), Gaps = 79/349 (22%)
Query: 1 MNITQVTTVQQLSIQPIL-----DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 55
M I + T++Q+L +L GD+ + +QTGSGKTLAY +PI+ ++ M ++ RK
Sbjct: 145 MRIQKPTSIQKLVFSHMLLSGKSADGDLFINAQTGSGKTLAYLLPIVSRILRMNVRVDRK 204
Query: 56 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 115
G +A+I+ PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ T
Sbjct: 205 SGCFALIVAPTRELASQIYSVASMLTNCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGT 264
Query: 116 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
PG RILD + +++++Q LS
Sbjct: 265 PG--------------------------RILDH------LQNTKVIREQ--------LSH 284
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK------QKPQF 229
+L + V+DE D++++ G+E I + L I+ + + PQ
Sbjct: 285 SL------------------RYFVMDEGDKLMELGFEETIRDILNIIHEVPVNTERFPQL 326
Query: 230 QS----VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTP 285
+ +L SAT+ +L + LQN I S I N P+ L Q +V P
Sbjct: 327 PTRIVHILCSATMQNGAAKLGDVALQNYKLIS---SRKIENDDAITEAPEQLLQKIVVVP 383
Query: 286 PKLRLVALAS---FILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
PKLRLV LA+ I K + + + S+ +VF++ D ++H E ST
Sbjct: 384 PKLRLVTLAAELDEIHRKHKQLQDGVTSRTMVFLSCSDSVEFHHETFST 432
>gi|322701689|gb|EFY93438.1| ATP-dependent RNA helicase DBP7, putative [Metarhizium acridum CQMa
102]
Length = 749
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 294/541 (54%), Gaps = 61/541 (11%)
Query: 410 MNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----QEMRPKISR 463
MN+ + T +QQ I +L + GD V+++TGSGKT +Y +PI+ ++ Q +I R
Sbjct: 163 MNLERPTAIQQKVIPHMLSNNGDAFVQAETGSGKTFSYLLPILHRVLMLSSQGDGKQIHR 222
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
GI+A+++ PTRELA QT + +L + F W+V + +TGGE K+EKARIRKG++ LVA
Sbjct: 223 DSGIFAIVVSPTRELAKQTHTVLEQLIRPFPWLVSTAITGGESKKAEKARIRKGVNFLVA 282
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------- 574
TPGRL DH +T+ L V L+LDE DR++D G+E D+ + ++ LKK
Sbjct: 283 TPGRLADHIDNTKALNMGTVRWLILDEGDRLMDLGFEEDLKKTIDALKKVSVAKTTENGT 342
Query: 575 -----PQFQ-SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV--IPDSLK 626
P+ + ++L SAT+ VQ+L M+L + + A + +D + +V P L
Sbjct: 343 SLESLPERRVTVLCSATMKMNVQKLGEMSLADATFL-ATEKSDDDKINEDVVHKAPAQLH 401
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL--------- 677
Q +I+ P KLRLV L S++ K K +VFM+ D D+H E+L
Sbjct: 402 QTYIIVPSKLRLVTLTSYL--KSVFSRRGRTMKAIVFMSCADTVDFHYEMLRDPTETELP 459
Query: 678 --------------------STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS-GVLIC 716
++ ++ ++HGS+SQ RT K+F + KS +LI
Sbjct: 460 AASQKDKELLEKTVSKAAYITSPASPDVILHRMHGSLSQPIRTATLKSFSACKSPSLLIT 519
Query: 717 TDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP-SEVKLVEEL 775
TDV++RGLD+P VD +++Y S D++HRVGRTAR G G + LFL+P +E +E L
Sbjct: 520 TDVSSRGLDIPSVDLVIEYDPAFSFADHIHRVGRTARAGRPGDATLFLLPGTEEGYIELL 579
Query: 776 QNR---RIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
++ + E LK L N L +E + + A +LQ+ FE ++
Sbjct: 580 KSSTPLSSQSYEGILKTGLMNKLEFPVETSATPTDGQSYHDKAESLQLHFEQRLINDNKR 639
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI-SGIGKPKNKE 891
A G+ S +R YA++ ++ R F+ Q+HLGH AKSF LRD P I +GI + NK+
Sbjct: 640 LELARNGFKSHIRAYATHVREERVYFDITQLHLGHVAKSFGLRDPPGGIGAGIDRKANKK 699
Query: 892 E 892
+
Sbjct: 700 K 700
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 182/363 (50%), Gaps = 70/363 (19%)
Query: 1 MNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----QEMRPKISR 54
MN+ + T +QQ I +L + GD V+++TGSGKT +Y +PI+ ++ Q +I R
Sbjct: 163 MNLERPTAIQQKVIPHMLSNNGDAFVQAETGSGKTFSYLLPILHRVLMLSSQGDGKQIHR 222
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
GI+A+++ PTRELA QT + +L + F W+V + +TGGE K+EKARIRKG++ LVA
Sbjct: 223 DSGIFAIVVSPTRELAKQTHTVLEQLIRPFPWLVSTAITGGESKKAEKARIRKGVNFLVA 282
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRL DH +T+ L V L+LDE DR++D G+E D+ + ++ LKK
Sbjct: 283 TPGRLADHIDNTKALNMGTVRWLILDEGDRLMDLGFEEDLKKTIDALKK----------- 331
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
K TE LE L +++ +VL
Sbjct: 332 ------VSVAKTTEN--------------------------GTSLESLPERR---VTVLC 356
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV--IPDSLKQHFIVTPPKLRLVA 292
SAT+ VQ+L M+L + + A + +D + +V P L Q +I+ P KLRLV
Sbjct: 357 SATMKMNVQKLGEMSLADATFL-ATEKSDDDKINEDVVHKAPAQLHQTYIIVPSKLRLVT 415
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEIPK 352
L S++ K K +VFM+ D D+H E+L DP E+P
Sbjct: 416 LTSYL--KSVFSRRGRTMKAIVFMSCADTVDFHYEMLR-------------DPTETELPA 460
Query: 353 KTE 355
++
Sbjct: 461 ASQ 463
>gi|322706785|gb|EFY98365.1| ATP-dependent RNA helicase DBP7, putative [Metarhizium anisopliae
ARSEF 23]
Length = 750
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 197/557 (35%), Positives = 299/557 (53%), Gaps = 65/557 (11%)
Query: 410 MNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----QEMRPKISR 463
MN+ + T +QQ I +L + GD V+++TGSGKT +Y +PI+ ++ Q +I R
Sbjct: 164 MNLERPTAIQQKVIPHMLSNSGDAFVQAETGSGKTFSYLLPILHRVLMLSSQGDGKQIHR 223
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
GI+A+I+ PTRELA QT + +L + F W+V + +TGGE K+EKARIRKG++ LVA
Sbjct: 224 DSGIFAIIVSPTRELAKQTHTVLEQLIRLFPWLVSTAITGGESKKAEKARIRKGVNFLVA 283
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK--------KQKP 575
TPGRL DH +T+ L V L+LDE DR++D G+E D+ + ++ LK +
Sbjct: 284 TPGRLADHIDNTKALNMGTVRWLILDEGDRLMDLGFEEDLKKTIDALKNVPVAKTTENGT 343
Query: 576 QFQS-------ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV--IPDSLK 626
+S +L SAT+ VQ+L M+L + + A + +D + +V P L
Sbjct: 344 SLESLPARRVTVLCSATMKMNVQKLGEMSLADATFL-ATEKSDDDKINEDIVHKAPAQLH 402
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL--------- 677
Q +I+ P KLRLV L S++ K K ++FM+ D D+H E+L
Sbjct: 403 QTYIIVPSKLRLVTLTSYL--KSVFSRRGRTMKAIIFMSCADTVDFHYEMLRNPNETELP 460
Query: 678 --------------------STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS-GVLIC 716
++ ++ ++HGS+SQ RT K+F + KS +LI
Sbjct: 461 AAAQKEKELIEKTVSKAAYITSPASPDVILHRMHGSLSQPIRTATLKSFSACKSPSLLIT 520
Query: 717 TDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP-SEVKLVEEL 775
TDV++RGLD+P VD +++Y S D++HRVGRTAR G G + LFL+P +E +E L
Sbjct: 521 TDVSSRGLDIPSVDLVIEYDPAFSFADHIHRVGRTARAGRSGDATLFLLPGTEEGYIELL 580
Query: 776 QNR---RIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
++ + E LK L N L +E + + A +LQ+ FE +L
Sbjct: 581 KSSTPPSSQSYENILKTGLMNKLEFPVETSATPTDGQSYHDKAESLQLHFEQRLLNDNKR 640
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEE 892
A G+ S +R YA++ ++ R F+ Q+HLGH AKSF LRD P GIG +++
Sbjct: 641 LELARNGFKSHIRAYATHIREERVHFDITQLHLGHVAKSFGLRDPP---GGIGAGIDRKA 697
Query: 893 LKNKKMAINKEK--SFK 907
K K A +K++ SFK
Sbjct: 698 KKKKGSANHKDRHSSFK 714
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 57/337 (16%)
Query: 1 MNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----QEMRPKISR 54
MN+ + T +QQ I +L + GD V+++TGSGKT +Y +PI+ ++ Q +I R
Sbjct: 164 MNLERPTAIQQKVIPHMLSNSGDAFVQAETGSGKTFSYLLPILHRVLMLSSQGDGKQIHR 223
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
GI+A+I+ PTRELA QT + +L + F W+V + +TGGE K+EKARIRKG++ LVA
Sbjct: 224 DSGIFAIIVSPTRELAKQTHTVLEQLIRLFPWLVSTAITGGESKKAEKARIRKGVNFLVA 283
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRL DH +T+ L V L+LDE DR++D G+E D+ + ++ LK ++ ++
Sbjct: 284 TPGRLADHIDNTKALNMGTVRWLILDEGDRLMDLGFEEDLKKTIDALK-------NVPVA 336
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
T T E+L +V +VL
Sbjct: 337 KTTENGTSL----ESLPARRV-----------------------------------TVLC 357
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV--IPDSLKQHFIVTPPKLRLVA 292
SAT+ VQ+L M+L + + A + +D + +V P L Q +I+ P KLRLV
Sbjct: 358 SATMKMNVQKLGEMSLADATFL-ATEKSDDDKINEDIVHKAPAQLHQTYIIVPSKLRLVT 416
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
L S++ K K ++FM+ D D+H E+L
Sbjct: 417 LTSYL--KSVFSRRGRTMKAIIFMSCADTVDFHYEML 451
>gi|224009331|ref|XP_002293624.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971024|gb|EED89360.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2338
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 296/595 (49%), Gaps = 123/595 (20%)
Query: 405 NLNEGMNITQVTTVQQLSIQPILDGG--------------DVLVRSQTGSGKTLAYAIPI 450
N N ++Q T VQ +I +L ++ ++S+TGSGKTLAY +PI
Sbjct: 1649 NPNGHFQLSQPTIVQSRAISSLLPSNLNKRKENGVKKLEVNLFIQSETGSGKTLAYLLPI 1708
Query: 451 IQKL------QEMRPKISRK-DGIYAVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLT 502
+Q L Q ++ K+ R+ G +I+ PTRELA QT I LC KSF WIVP +
Sbjct: 1709 LQHLSVDTRTQHIK-KVDRQLGGTRTIILTPTRELATQTYTIANNLCSKSFPWIVPGCFS 1767
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS---KVEHLVLDEADRILDQGY 559
GGEK KSEKAR+RKGI+IL+ATPGRLLDH TE+L + K+E LVLDEADR+LD G
Sbjct: 1768 GGEKRKSEKARLRKGITILIATPGRLLDHVCKTESLLSALKGKLEWLVLDEADRLLDAGL 1827
Query: 560 ERDIAEFLEILKKQKP---------QFQSILLSATLTPAVQRLAGMTL------------ 598
+ + ++ L+ +P ++S+L+SAT+T ++ LA L
Sbjct: 1828 GGQVEQIVQHLRSNQPGAGPKRDGVTWRSVLVSATVTREMEGLAKTVLGGDGWVWARGHS 1887
Query: 599 -------QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
++P++ D+ + N P L Q ++V KLRL AL +F+ + N
Sbjct: 1888 KKSASKNESPLEEIEGDTQNNANHELDNTAPRQLAQLYMVVSAKLRLSALIAFLAARASN 1947
Query: 652 VNEDEESKMLVFMATQDMADYHTELLST----------------------VLGENIAFFK 689
+ +VF++T D DYH L S + G++ +K
Sbjct: 1948 -----GERTVVFLSTCDSVDYHHALFSAMSSVMANDDNKDDDRESSDNTGIFGKHCPVYK 2002
Query: 690 LHGSMSQSERTEVFKTFRSVK-------SGVLICTDVAARGLDLPLVDWIVQYTAPSSST 742
LHG + ++R K F S VL+ TDVAARGL+ +DWIVQY P +
Sbjct: 2003 LHGDVPHAQRLSTLKQFTGEGNKSSQHLSAVLLATDVAARGLNFGSLDWIVQYDPPCETK 2062
Query: 743 DYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIR-IEEIKLKDCLQNLLS----V 797
DYVHR GR+AR G G +LLFL+PSE + VE LQ R ++ I + L L S V
Sbjct: 2063 DYVHRAGRSARAGQSGHALLFLLPSERQYVEVLQLRGMKDISALSLSATLTAAASLCPGV 2122
Query: 798 KMEGD----LSRLADGNVETAATALQMSFESAVLQQKI---------------------- 831
EG+ + +DG E A+Q E V+Q
Sbjct: 2123 TQEGESKASCNTFSDGREEAFTMAIQNRLEECVVQNDTDYRALMAKKAKDAKQRRKSMKE 2182
Query: 832 ----LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
L A + ++++VR Y + K +RHIFN + +HLGH A+S AL+D P ++S
Sbjct: 2183 AVGPLLEGARRAFSAFVRAYPAKEKAVRHIFNARALHLGHIARSLALKDPPKMVS 2237
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 174/334 (52%), Gaps = 68/334 (20%)
Query: 22 DVLVRSQTGSGKTLAYAIPIIQKL------QEMRPKISRK-DGIYAVIILPTRELALQTL 74
++ ++S+TGSGKTLAY +PI+Q L Q ++ K+ R+ G +I+ PTRELA QT
Sbjct: 1689 NLFIQSETGSGKTLAYLLPILQHLSVDTRTQHIK-KVDRQLGGTRTIILTPTRELATQTY 1747
Query: 75 EIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS- 132
I LC KSF WIVP +GGEK KSEKAR+RKGI+IL+ATPGRLLDH TE+L +
Sbjct: 1748 TIANNLCSKSFPWIVPGCFSGGEKRKSEKARLRKGITILIATPGRLLDHVCKTESLLSAL 1807
Query: 133 --KVEHLVLDEADRILDQGYERDIAEFLEILKKQKP---------QFQSILLSATLTPAT 181
K+E LVLDEADR+LD G + + ++ L+ +P ++S+L+SAT+T
Sbjct: 1808 KGKLEWLVLDEADRLLDAGLGGQVEQIVQHLRSNQPGAGPKRDGVTWRSVLVSATVT--- 1864
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
+ E L VL + +G+ + A K + P
Sbjct: 1865 ---REMEGLA-----KTVLGGDGWVWARGHSKKSAS-----KNESP-------------- 1897
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
++ + G T N + ++ NT P L Q ++V KLRL AL +F+ +
Sbjct: 1898 LEEIEGDTQNNA-------NHELDNTA-----PRQLAQLYMVVSAKLRLSALIAFLAARA 1945
Query: 302 QNVNEDEESKMLVFMATQDMADYHTELLSTKKKI 335
N + +VF++T D DYH L S +
Sbjct: 1946 SN-----GERTVVFLSTCDSVDYHHALFSAMSSV 1974
>gi|363754663|ref|XP_003647547.1| hypothetical protein Ecym_6354 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891184|gb|AET40730.1| hypothetical protein Ecym_6354 [Eremothecium cymbalariae
DBVPG#7215]
Length = 738
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 323/623 (51%), Gaps = 93/623 (14%)
Query: 339 KEYNIDP-DNYEIP-KKTEVKSGPI-------SSLFQNNPDIPN-------VPTRRLKPV 382
+E+ I+ D+ +P +SGPI SSLF +N +I V + P
Sbjct: 83 REHTINAVDSAPVPAHNNSTRSGPIQINSQRVSSLFTSNREITTSFDTSEQVAESEVTP- 141
Query: 383 SEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSG 441
S A S+E GI + +L+E M++++ T +Q+L+I L D+ + +QTGSG
Sbjct: 142 SNAPLLLDSFESL-GITSPLVSHLSEKMHVSKPTRIQKLAIPNFLVCRNDLFIHAQTGSG 200
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
KTLA+ +PI QK+ M +I R G +A+II PTRELA Q + + L ++VP L
Sbjct: 201 KTLAFLLPIFQKILSMEEQIDRHSGCFAMIIAPTRELASQIYNVASTLAGCCHYLVPCLL 260
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHT----ETLKFSKVEHLVLDEADRILDQ 557
GGE+ KSEKAR+RKG + ++ TPGR+LDH ++T E L +S + +++LDE D++++
Sbjct: 261 VGGERKKSEKARLRKGANFIIGTPGRILDHLQNTKVIKEQLSYS-LRYVILDEGDKLMEL 319
Query: 558 GYERDIAEFLEILKK---QKPQF-------QSILLSATLTPAVQRLAGMTLQNPIQIDAA 607
G+E + L+I+ + +F +L SAT V +L + L++ I +
Sbjct: 320 GFEETLTSILDIIHNIPCESSKFPVLPTRIMHVLCSATKKGTVAKLGNIALKDYKLISSG 379
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES-----KMLV 662
N+ D +PD L Q + PPKLRLV L G N+ + + S + +V
Sbjct: 380 S-----NSADMNTVPDQLLQRITIVPPKLRLVTLC----GALSNLTKKQSSSTTTMRTIV 430
Query: 663 FMATQDMADYHTELLS-------TVLGE---------------------NIAFFKLHGSM 694
F++ D D+H ++ S +L E N+ F+KLHGS+
Sbjct: 431 FLSCSDSVDFHFDVFSAYNDYYRNLLDETVRLLAKRNTALPCLSADHDPNVIFYKLHGSL 490
Query: 695 SQSERTEVFKTFRS---VKSG---VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
SQ RT K F S SG ++ CTDVA+RGLDLP V +V+ P S D++HRV
Sbjct: 491 SQKVRTATLKHFSSETDATSGKHLIMFCTDVASRGLDLPHVSTVVEMDPPFSVEDHLHRV 550
Query: 749 GRTARVGHEGSSLLFLIPSE-------VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
GRTAR G G SLLFL+P E +K + ++ ++ LK Q+ S +
Sbjct: 551 GRTARAGVNGESLLFLLPGEEEGYVEYIKPYHPQGYQFLKFDKDILKPAFQD--SNIQKS 608
Query: 802 DLSRLAD--GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
D + L+D + + AT ++ E +L+ A GYTS +R YA++ + +FN
Sbjct: 609 DNTVLSDVHASWDNNATTWHLNVERRILENPDAKQLAHNGYTSHIRAYATHLSKEKLVFN 668
Query: 860 FKQIHLGHFAKSFALRDAPSVIS 882
K +HLGH AK+FALR+ P IS
Sbjct: 669 IKCLHLGHLAKAFALRERPKAIS 691
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 83/346 (23%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 59
M++++ T +Q+L+I L D+ + +QTGSGKTLA+ +PI QK+ M +I R G +
Sbjct: 168 MHVSKPTRIQKLAIPNFLVCRNDLFIHAQTGSGKTLAFLLPIFQKILSMEEQIDRHSGCF 227
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
A+II PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 228 AMIIAPTRELASQIYNVASTLAGCCHYLVPCLLVGGERKKSEKARLRKGANFIIGTPG-- 285
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
RILD + +++K+Q
Sbjct: 286 ------------------------RILDH------LQNTKVIKEQ--------------- 300
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK---QKPQF------- 229
L +S + +++LDE D++++ G+E + L+I+ + +F
Sbjct: 301 ----------LSYS-LRYVILDEGDKLMELGFEETLTSILDIIHNIPCESSKFPVLPTRI 349
Query: 230 QSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLR 289
VL SAT V +L + L++ I + N+ D +PD L Q + PPKLR
Sbjct: 350 MHVLCSATKKGTVAKLGNIALKDYKLISSGS-----NSADMNTVPDQLLQRITIVPPKLR 404
Query: 290 LVALASFILGKCQNVNEDEES-----KMLVFMATQDMADYHTELLS 330
LV L G N+ + + S + +VF++ D D+H ++ S
Sbjct: 405 LVTLC----GALSNLTKKQSSSTTTMRTIVFLSCSDSVDFHFDVFS 446
>gi|443923463|gb|ELU42701.1| ATP-dependent RNA helicase DDX18 (DEAD-box protein 18) [Rhizoctonia
solani AG-1 IA]
Length = 814
Score = 303 bits (777), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 219/637 (34%), Positives = 313/637 (49%), Gaps = 127/637 (19%)
Query: 361 ISSLFQNNPDIPNVPT---RRLKPVSEALFAP---TSYEEFPGIHPFMKKNLNEGMNITQ 414
ISSLF NP I P KP+ + AP +S E G+ P + ++ + I++
Sbjct: 103 ISSLFSYNPKIEPAPQPIPGPSKPIGKPSNAPLTDSSTFEGLGLDPLITAHIQTKLGISK 162
Query: 415 VTTVQQLSI-----QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRP--KISRKDGI 467
T VQ+ S+ Q D ++SQTGSGKTLA+ +PIIQ L + I R G
Sbjct: 163 PTLVQRASLTALTHQSATTDRDAFIQSQTGSGKTLAFLLPIIQDLLPLSSLSYIDRSIGT 222
Query: 468 YAVIILPTRELALQTLEIFTKLC-------------------KSFTWIVPSWLTGGEKMK 508
A+II PTRELA Q ++ +L + W+V LTGG
Sbjct: 223 LAIIIAPTRELAKQISDVLEQLLTMRLRPRTGDAEADQDAGPRLTRWLVSGLLTGGATRA 282
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
EKAR+RKG+ ILV+TPGRLLDH ++TE+ SK LVLDEADR+++ G+E + L+
Sbjct: 283 HEKARLRKGVPILVSTPGRLLDHLQNTESFNVSKCRWLVLDEADRLMELGFEETLVGILK 342
Query: 569 ILKKQKP----------------------QFQSILLSATLTPAVQRLAGMTLQNPIQIDA 606
L ++ + ++IL SAT+ VQ+LAGM LQ PI I A
Sbjct: 343 ALDSRRRMTEMAVKEGILGREVGGWDWERRRRTILCSATIREDVQKLAGMALQQPIVIKA 402
Query: 607 ADSTDIHNTT----------DSLVIPDSLKQHFIVTPPKLRLVALASFI---LGKCQNVN 653
S D+ +T D P L Q ++V P K RLVAL S + L K +
Sbjct: 403 T-SNDLTASTPATKEETAAADKFTPPSQLSQKYVVVPLKQRLVALISLLRMLLAKGR--- 458
Query: 654 EDEESKMLVFMATQDMADYHTELLS------------------------------TVLGE 683
++++VFM+ D D+H LL + L
Sbjct: 459 --AGARIIVFMSCTDSVDFHWRLLGEASMDNSDSEQETSESKDKEEDEGEPIAVKSSLLP 516
Query: 684 NIAFFKLHGSMSQSERTEVFKTFR----------SVKSGVLICTDVAARGLDLPLVDWIV 733
N + ++LHGS+ R F S +SG+L CT VA+RGLDLPLV +V
Sbjct: 517 NTSVYRLHGSLPLPTRLASLNAFSGKNKGKTQVPSTESGILFCTSVASRGLDLPLVRAVV 576
Query: 734 QYTAPS--SSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL 791
QY P+ +T+YVHRVGRTAR G G + + PSE + V ++ +E+ +
Sbjct: 577 QYDLPTEGGATEYVHRVGRTARAGKGGEAWAIVGPSETEWVGWVEKH---MEQTDKGEGS 633
Query: 792 QNLLSVKMEGDLSRLADG------NVETAATALQMSFESAVLQQKILHTSACKGYTSWVR 845
+ L+ V +E D+ L DG E AT +Q+ FE +L+Q + A K + S +R
Sbjct: 634 KQLVQVGVE-DV--LKDGFGGRGREYEDRATEVQLVFERWILKQDKNASLARKAFQSHMR 690
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
YA++ D +H+F+ + +HLGH AK+F LRDAP +S
Sbjct: 691 AYATHPADEKHMFHVRNLHLGHLAKAFGLRDAPGAVS 727
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 177/369 (47%), Gaps = 84/369 (22%)
Query: 1 MNITQVTTVQQLSI-----QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRP--KIS 53
+ I++ T VQ+ S+ Q D ++SQTGSGKTLA+ +PIIQ L + I
Sbjct: 158 LGISKPTLVQRASLTALTHQSATTDRDAFIQSQTGSGKTLAFLLPIIQDLLPLSSLSYID 217
Query: 54 RKDGIYAVIILPTRELALQTLEIFTKLC-------------------KSFTWIVPSWLTG 94
R G A+II PTRELA Q ++ +L + W+V LTG
Sbjct: 218 RSIGTLAIIIAPTRELAKQISDVLEQLLTMRLRPRTGDAEADQDAGPRLTRWLVSGLLTG 277
Query: 95 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 154
G EKAR+RKG+ ILV+TPGRLLDH ++TE+ SK LVLDEADR+++ G+E +
Sbjct: 278 GATRAHEKARLRKGVPILVSTPGRLLDHLQNTESFNVSKCRWLVLDEADRLMELGFEETL 337
Query: 155 AEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERD 214
L+ L ++ + TE V+ +L D +ER
Sbjct: 338 VGILKALDSRR-------------------RMTEM----AVKEGILGREVGGWD--WER- 371
Query: 215 IAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTT------ 268
+ +++L SAT+ VQ+LAGM LQ PI I A S D+ +T
Sbjct: 372 -------------RRRTILCSATIREDVQKLAGMALQQPIVIKAT-SNDLTASTPATKEE 417
Query: 269 ----DSLVIPDSLKQHFIVTPPKLRLVALASF---ILGKCQNVNEDEESKMLVFMATQDM 321
D P L Q ++V P K RLVAL S +L K + ++++VFM+ D
Sbjct: 418 TAAADKFTPPSQLSQKYVVVPLKQRLVALISLLRMLLAKGR-----AGARIIVFMSCTDS 472
Query: 322 ADYHTELLS 330
D+H LL
Sbjct: 473 VDFHWRLLG 481
>gi|366990927|ref|XP_003675231.1| hypothetical protein NCAS_0B07760 [Naumovozyma castellii CBS 4309]
gi|342301095|emb|CCC68860.1| hypothetical protein NCAS_0B07760 [Naumovozyma castellii CBS 4309]
Length = 748
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 204/616 (33%), Positives = 326/616 (52%), Gaps = 83/616 (13%)
Query: 361 ISSLFQNNPDIPN-VPTRR------LKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNIT 413
+SSLF +N +I + T + + P S A ++E GI + +L+E M I
Sbjct: 113 VSSLFTSNREIATAINTNKHDNDVEINP-SNAPLQEDTFEAL-GIKDPLLTHLDEKMRIK 170
Query: 414 QVTTVQQLSIQPIL----DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ T++Q+L I ++ + D+ + +QTGSGKTLAY +PI+ + M I RK G +A
Sbjct: 171 KPTSIQKLVIPTLIASPRNNNDLFIHAQTGSGKTLAYLLPILTSILNMDAHIDRKSGAFA 230
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+L
Sbjct: 231 LIVAPTRELASQIYSVASMLANCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRIL 290
Query: 530 DHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKK-----QK-PQFQS- 579
DH ++T+ ++ + + +LVLDE D++++ G+E+ I + L+I+ + QK P+ S
Sbjct: 291 DHLENTKVIRDQMGNSLRYLVLDEGDKLMELGFEQTINDILKIIHEIPINTQKFPKLPSR 350
Query: 580 ---ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
+L SAT+ V +L + LQN I + N T + +PD L Q + PPKL
Sbjct: 351 IINVLCSATVKGGVTKLGDIALQNYKLISNGKKGEKDNKTMT-AVPDQLLQQITIVPPKL 409
Query: 637 RLVALASFILGKCQNVNEDEE-SKMLVFMATQDMADYHTELLST-------VLGENIAF- 687
RLV LA+ + + V EE ++ +VF++ D ++H E+ S+ ++G+++
Sbjct: 410 RLVTLAAELNNITKKVQSSEETTRTMVFLSCSDNVEFHFEVFSSNDSHHRNLVGDSVRVL 469
Query: 688 --------------------FKLHGSMSQSERTEVFKTFRSVKSG------VLICTDVAA 721
+KLHGS+SQ RT+ K F + ++ CTDVA+
Sbjct: 470 TKGNTILPCFDPSSAPKVICYKLHGSLSQQMRTQTLKHFATDNEATKGKHLIMFCTDVAS 529
Query: 722 RGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE-------VKLVEE 774
RGLDL V +++ P ++ D++HR+GRTAR G G SLLFL+P E +K
Sbjct: 530 RGLDL-TVSTVIELDPPFAAEDHLHRIGRTARAGKHGESLLFLLPGEEEGYMDYIKQYHP 588
Query: 775 LQNRRIRIEEIKLKDCLQNLL-----SVKMEGDLSRLADG--NVE--TAATALQMSFESA 825
+ ++ +E LK ++ K + + R D N+E T AT ++ E
Sbjct: 589 MGWELLKFDEDLLKPAFSDIRVGRNDRTKEDAEKRRKKDKDENLEWDTNATTWHLNVERR 648
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+L+ A +GYTS VR YA++ + FN + +HLGH AKSF LR+ P + +G
Sbjct: 649 LLEDSSFKNVAMRGYTSHVRAYATHISQEKKFFNVRCLHLGHLAKSFGLREKPKSMGALG 708
Query: 886 KPK----NKEELKNKK 897
+ N E +NKK
Sbjct: 709 SKQQLEENDERKRNKK 724
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 175/339 (51%), Gaps = 60/339 (17%)
Query: 1 MNITQVTTVQQLSIQPIL----DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 56
M I + T++Q+L I ++ + D+ + +QTGSGKTLAY +PI+ + M I RK
Sbjct: 167 MRIKKPTSIQKLVIPTLIASPRNNNDLFIHAQTGSGKTLAYLLPILTSILNMDAHIDRKS 226
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G +A+I+ PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TP
Sbjct: 227 GAFALIVAPTRELASQIYSVASMLANCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTP 286
Query: 117 GRLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 173
GR+LDH ++T+ ++ + + +LVLDE D++++ G+E+ I + L+I+ +
Sbjct: 287 GRILDHLENTKVIRDQMGNSLRYLVLDEGDKLMELGFEQTINDILKIIHE---------- 336
Query: 174 SATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVL 233
P T KF K+ +++ VL
Sbjct: 337 ----IPIN-------TQKFPKLPSRIIN------------------------------VL 355
Query: 234 LSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 293
SAT+ V +L + LQN I + N T + +PD L Q + PPKLRLV L
Sbjct: 356 CSATVKGGVTKLGDIALQNYKLISNGKKGEKDNKTMT-AVPDQLLQQITIVPPKLRLVTL 414
Query: 294 ASFILGKCQNVNEDEE-SKMLVFMATQDMADYHTELLST 331
A+ + + V EE ++ +VF++ D ++H E+ S+
Sbjct: 415 AAELNNITKKVQSSEETTRTMVFLSCSDNVEFHFEVFSS 453
>gi|50292943|ref|XP_448904.1| hypothetical protein [Candida glabrata CBS 138]
gi|74697717|sp|Q8TFL3.1|DBP7_CANGA RecName: Full=ATP-dependent RNA helicase DBP7
gi|20086306|gb|AAM08097.1| DBP7p [Candida glabrata]
gi|49528217|emb|CAG61874.1| unnamed protein product [Candida glabrata]
Length = 715
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 308/606 (50%), Gaps = 82/606 (13%)
Query: 388 APTSYEEFPG--IHPFMKKNLNEGMNITQVTTVQQLSIQPIL---DGGDVLVRSQTGSGK 442
AP + + F G + + +L M I + T++Q++ I IL D D + +QTGSGK
Sbjct: 120 APLTDDSFEGLGVGSLVVSHLENKMRIQKSTSIQKVVIPQILQNADKTDFFIHAQTGSGK 179
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
TLAY +PI + M I RK G +A+II PTRELA Q + T L ++VP L
Sbjct: 180 TLAYLLPIFSAILGMGDHIDRKSGCFALIIAPTRELASQIYHVTTMLANCCHYLVPCLLI 239
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKF---SKVEHLVLDEADRILDQGY 559
GGE+ KSEKAR+RKG + ++ TPGR+LDH ++T+ +K S + ++VLDE D++++ G+
Sbjct: 240 GGERKKSEKARLRKGCNFIIGTPGRILDHFQNTKVIKEQMQSSLRYVVLDEGDKLMELGF 299
Query: 560 ERDIAEFLEILK------KQKPQFQS----ILLSATLTPAVQRLAGMTLQN--PIQIDAA 607
E I + +EI+ ++ P+ + +L SAT V +L+ +L N I I
Sbjct: 300 EETINQIMEIVNSMDVITRKYPKLPNRIVHLLCSATKNNEVAKLSKRSLDNYKVISIGGK 359
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES---KMLVFM 664
T + NT+ +PD L Q ++ PPKLRL+ LA +L Q D S + +VF+
Sbjct: 360 KDTMMDNTS----VPDQLLQKVVIAPPKLRLITLAG-VLDGIQKKPLDAGSVAKRTIVFL 414
Query: 665 ATQDMADYHTELLS-------TVLGEN---------------------IAFFKLHGSMSQ 696
+ D DYH E+ S ++G++ I +KLHGS+SQ
Sbjct: 415 SCADSVDYHFEVFSGNDGLYKNLVGDSVRVLSKGNKILPSIKDEELPGIICYKLHGSLSQ 474
Query: 697 SERTEVFKTFRS------VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
RT K F + K +L CTDVA+RGLDLP V ++++ P + D++HR+GR
Sbjct: 475 QMRTMTLKHFATDSEQTKGKHLILFCTDVASRGLDLPDVSTVIEFDPPFAVEDHLHRIGR 534
Query: 751 TARVGHEGSSLLFLIPSEVK-LVEELQ------------NRRIRIEEIKLKDCLQNLLSV 797
TAR G G +LLFL+P E + ++ +Q + + I+ D +N +
Sbjct: 535 TARAGRSGEALLFLLPGEEEGYLDYIQKYHPKGWDLLDAEKDVLIKAFNDIDVARNDKEI 594
Query: 798 KMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
K G +T AT ++ E +L+ + A KGY S VR YA++ +
Sbjct: 595 KSTGKTFEW-----DTNATTWHLNVERRILENEQFKEQATKGYISHVRAYATHISAEKQY 649
Query: 858 FNFKQIHLGHFAKSFALRDAPSVIS-GIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
FN K +HLGH AKSF LRD P + K N E K K K F+ + KQ
Sbjct: 650 FNLKGVHLGHLAKSFGLRDRPKAMGMNSSKDANGNERSKPKKENAKNKMFRM-ARMAAKQ 708
Query: 917 MLSEFD 922
EF+
Sbjct: 709 SADEFN 714
Score = 162 bits (410), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 170/355 (47%), Gaps = 81/355 (22%)
Query: 1 MNITQVTTVQQLSIQPIL---DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q++ I IL D D + +QTGSGKTLAY +PI + M I RK G
Sbjct: 144 MRIQKSTSIQKVVIPQILQNADKTDFFIHAQTGSGKTLAYLLPIFSAILGMGDHIDRKSG 203
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A+II PTRELA Q + T L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 204 CFALIIAPTRELASQIYHVTTMLANCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 263
Query: 118 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
R+LDH ++T+ + K Q QS L
Sbjct: 264 RILDHFQNTKVI-----------------------------------KEQMQSSL----- 283
Query: 178 TPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK------KQKPQFQS 231
++VLDE D++++ G+E I + +EI+ ++ P+ +
Sbjct: 284 ------------------RYVVLDEGDKLMELGFEETINQIMEIVNSMDVITRKYPKLPN 325
Query: 232 ----VLLSATLTPAVQRLAGMTLQN--PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTP 285
+L SAT V +L+ +L N I I T + NT+ +PD L Q ++ P
Sbjct: 326 RIVHLLCSATKNNEVAKLSKRSLDNYKVISIGGKKDTMMDNTS----VPDQLLQKVVIAP 381
Query: 286 PKLRLVALASFILGKCQNVNEDEES---KMLVFMATQDMADYHTELLSTKKKIKK 337
PKLRL+ LA +L Q D S + +VF++ D DYH E+ S + K
Sbjct: 382 PKLRLITLAG-VLDGIQKKPLDAGSVAKRTIVFLSCADSVDYHFEVFSGNDGLYK 435
>gi|428672996|gb|EKX73909.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 648
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 287/563 (50%), Gaps = 98/563 (17%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDGIY 468
TQ T +Q SI IL G L+RS TGSGKTLA+ IP IQ+L KI+RKDG
Sbjct: 89 GFTQTTYIQNASIPKILGGSPTLIRSATGSGKTLAFLIPAIQRLVAPTNSEKITRKDGTK 148
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
+II+PTREL+LQT + + K F WIV S + GG+ KSEKARIRKGI++LV TPGR+
Sbjct: 149 VLIIVPTRELSLQTATVAENVSKPFPWIVVSSIIGGDSRKSEKARIRKGITLLVGTPGRI 208
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ----FQSILLSA 584
LDHC+HT S +E VLDEADR+LD G+E I L++ + Q Q++L SA
Sbjct: 209 LDHCEHTAAFNVSSLELFVLDEADRLLDMGFESKIKNIFGFLRESRSQTSKPVQTVLTSA 268
Query: 585 TLTPAVQRLAGMT-LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
TLT V +LA + P+ I D + + +P +L +++T K + + L +
Sbjct: 269 TLTDGVMKLANFCFIGKPVMIGMQD--------EIMKLPPNLVHEYVLTDCKNKFICLVA 320
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-------------------- 683
+L N + K+++F++ Y ++LL +
Sbjct: 321 LLLKYIAN-----QEKVIIFVSNCPSVIYMSQLLKQISWPTRKAQVKQQLPKGVREHEDE 375
Query: 684 ------------------NIAFFKLHGSMSQSERTEVFKTFRSVKSG-----------VL 714
NI + LHG+M ++R + RS ++G +L
Sbjct: 376 IYEFDEANVQKAPTHSIFNIPIYSLHGNMDPNDRYIFYALLRSFRNGYTRDFIKSKCAIL 435
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
I TDVA+RGL+L VD ++QY P +YVHR GRTAR+G GS+LL L+ E V+
Sbjct: 436 ISTDVASRGLNLSEVDRVIQYDPPQQLEEYVHRSGRTARIGGNGSALLILMYHEAHFVDS 495
Query: 775 LQNRRIRIEE---------IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
L+ + +++ I+ C ++L + K GD ++ FE
Sbjct: 496 LRKLGVSVKQIMEGSVWSYIEQTYCPKSLRNFK--GDFIGF-----------MRNKFEEM 542
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI---- 881
V L A + + + V+ Y +YS+DLR IF+FK++HLGH+A SF + PS I
Sbjct: 543 VQSDSDLKPCAERAFRASVQSYKTYSRDLRRIFDFKKLHLGHYATSFCISSKPSEIIKPK 602
Query: 882 --SGIGKP-KNKEELKNKKMAIN 901
S + +P K+K+ + NK I+
Sbjct: 603 PRSSVKRPAKDKQNIANKSARIS 625
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 119/183 (65%), Gaps = 6/183 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDGIY 59
TQ T +Q SI IL G L+RS TGSGKTLA+ IP IQ+L KI+RKDG
Sbjct: 89 GFTQTTYIQNASIPKILGGSPTLIRSATGSGKTLAFLIPAIQRLVAPTNSEKITRKDGTK 148
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
+II+PTREL+LQT + + K F WIV S + GG+ KSEKARIRKGI++LV TPGR+
Sbjct: 149 VLIIVPTRELSLQTATVAENVSKPFPWIVVSSIIGGDSRKSEKARIRKGITLLVGTPGRI 208
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ----FQSILLSA 175
LDHC+HT S +E VLDEADR+LD G+E I L++ + Q Q++L SA
Sbjct: 209 LDHCEHTAAFNVSSLELFVLDEADRLLDMGFESKIKNIFGFLRESRSQTSKPVQTVLTSA 268
Query: 176 TLT 178
TLT
Sbjct: 269 TLT 271
>gi|344299774|gb|EGW30127.1| ATP-dependent RNA helicase DBP7 [Spathaspora passalidarum NRRL
Y-27907]
Length = 734
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 214/629 (34%), Positives = 327/629 (51%), Gaps = 110/629 (17%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVS-----EALFAPTS-YEEFPG--IHPFMKKNLNEGMNI 412
+SSLF +N + T LKP + +A AP S FPG I+ + +L + +
Sbjct: 108 VSSLFTSNAE-----TTTLKPTTSSKTYDASNAPLSDSTTFPGLGINEKLSTHLTDHLRF 162
Query: 413 TQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +Q++ I +L DV V++QTGSGKTLA+ +P+ +L M I+R+ G++AVI
Sbjct: 163 KHPTKIQRMVIPTLLAQDNDVFVKAQTGSGKTLAFLLPLFHRL--MSEDITRESGLFAVI 220
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTRELA Q + L + IVP + GGEK KSEKAR+RKG++ILVATPGRL DH
Sbjct: 221 LTPTRELATQIYGVLETLTRCHHRIVPGIVIGGEKKKSEKARLRKGVNILVATPGRLADH 280
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDI----------AEFLEILKKQK--PQFQ- 578
++T+TL S++ +L+LDE D++++ G+E I + E L K K P +
Sbjct: 281 LENTKTLDVSQLRYLILDEGDKLVELGFEETITSITNKISQNSRIHETLTKWKGLPSKRI 340
Query: 579 SILLSATLTPAVQRLAGMTLQNP--IQIDAA-------DSTDIHNTTDSLVIPDSLKQHF 629
++L SAT+ V++L + LQNP IQ++ + +++ NT PD L Q+
Sbjct: 341 NVLCSATMQNNVEKLGSIILQNPTMIQVEKQHIGTVEFEESEVGNTA-----PDQLIQNI 395
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE-------------- 675
+V PPKLRLV L + + + + E S+ +VF + D ++H E
Sbjct: 396 VVVPPKLRLVTLNAML---SKYIRSSEASRTIVFFSCSDSVNFHFEVFTRNGKNPNKKQA 452
Query: 676 --------------LLSTVLGENIAFFKLHGSMSQSERTEVFKTF--RSVKSGVLICTDV 719
L + L + +KLHGS+SQ RT F + +L CTDV
Sbjct: 453 AEDIEEEEEEEANILTAPGLSSSTTVYKLHGSLSQKIRTSTLNHFIKDTTPHQILFCTDV 512
Query: 720 AARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP--------SEVKL 771
A+RGLDLP + +++Y P + D++HR+GR+AR+G++G++ LFL+P ++++
Sbjct: 513 ASRGLDLPNIANVIEYDPPFTIDDHLHRIGRSARLGNKGNATLFLMPGIEEAYVDGKLRV 572
Query: 772 V--EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS----------RLADGNVETAATALQ 819
V E R + E+I L+D V+ EG + + G + AT
Sbjct: 573 VHPNEGSLRILNYEQI-LED---GFAEVQEEGTAAAAAPAKKNDPKRKTGKWDIHATTWH 628
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP- 878
+ E +L+ H A +TS +R YA++ R FN K +HLGH AKSF LR+ P
Sbjct: 629 LDIERWLLEDTGAHDRAGHAFTSHIRAYATHLSSERDYFNVKLLHLGHLAKSFGLRETPK 688
Query: 879 ---------SVISGIGKPKNKEELKNKKM 898
SV +G K + K+E KKM
Sbjct: 689 KLGKSINHESVSTGTTKRRKKDEDPRKKM 717
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 162/332 (48%), Gaps = 56/332 (16%)
Query: 7 TTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
T +Q++ I +L DV V++QTGSGKTLA+ +P+ +L M I+R+ G++AVI+ P
Sbjct: 166 TKIQRMVIPTLLAQDNDVFVKAQTGSGKTLAFLLPLFHRL--MSEDITRESGLFAVILTP 223
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q + L + IVP + GGEK KSEKAR+RKG++ILVATPGRL DH ++
Sbjct: 224 TRELATQIYGVLETLTRCHHRIVPGIVIGGEKKKSEKARLRKGVNILVATPGRLADHLEN 283
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA---TC 182
T+TL S++ +L+LDE D++++ G+E I + Q + L P+
Sbjct: 284 TKTLDVSQLRYLILDEGDKLVELGFEETITSITNKI-SQNSRIHETLTKWKGLPSKRINV 342
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
C T K+ ++L I + EF E
Sbjct: 343 LCSATMQNNVEKLGSIILQNPTMIQVEKQHIGTVEFEE---------------------- 380
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
+++ NT PD L Q+ +V PPKLRLV L + + +
Sbjct: 381 -------------------SEVGNTA-----PDQLIQNIVVVPPKLRLVTLNAML---SK 413
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLSTKKK 334
+ E S+ +VF + D ++H E+ + K
Sbjct: 414 YIRSSEASRTIVFFSCSDSVNFHFEVFTRNGK 445
>gi|392597205|gb|EIW86527.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 562
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/513 (35%), Positives = 280/513 (54%), Gaps = 55/513 (10%)
Query: 393 EEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
+E P PF L+E M ++ +T++Q SI P+L G DVL ++TGSGKTLA
Sbjct: 17 QEAPAREPFSSLELSEATSKGLADMGLSTMTSIQAKSIPPLLAGRDVLGAARTGSGKTLA 76
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
+ IP ++ L M K ++G +I+ PTRELALQ E+ L + + GG
Sbjct: 77 FLIPCVELLHRM--KFKPRNGTGIIIVSPTRELALQIFEVARDLMAYHSQTF-GVVMGGA 133
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
++E +++KG+++LVATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++
Sbjct: 134 NQRAESEKLQKGVNLLVATPGRLLDHLQNTKGFVFRNLKALVIDEADRILEVGFEEEMKR 193
Query: 566 FLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDS 624
+ IL + Q S+L SAT T V LA M+L+ P+ ID D TT ++ +
Sbjct: 194 IISILPNENRQ--SMLFSATQTTKVNDLARMSLRPGPLHID----VDGEETTSTV---ST 244
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGEN 684
L Q ++V P + R + L +F+ ++ + K++VF ++ + YH ELL+ + +
Sbjct: 245 LSQGYVVCPSERRFLLLFTFL-------KKNLKKKVIVFFSSCNSVKYHGELLNYI---D 294
Query: 685 IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDY 744
I LHG Q +RT F F++ +SG+L+CT+VAARGLD+P VDWIVQ+ P DY
Sbjct: 295 IPVLDLHGKQKQQKRTNTFFEFKNAESGILLCTNVAARGLDIPRVDWIVQFDPPDDPRDY 354
Query: 745 VHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E
Sbjct: 355 IHRVGRTARAGKVGKSLLFLLPSELGFLRYLKQAKVPLNEYTFP--------------AE 400
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
R+A+ +Q E + + LH SA G+ S+++ YASYS L+ IF+ +
Sbjct: 401 RIAN---------VQSQLEKLLQKNYFLHQSAKDGFRSYLQSYASYS--LKKIFDINALD 449
Query: 865 LGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
L K+F P V +G K K ++
Sbjct: 450 LAKVGKAFGFSVPPRVNVNLGGGKAPSGTKRRR 482
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++ +T++Q SI P+L G DVL ++TGSGKTLA+ IP ++ L M K ++G
Sbjct: 41 MGLSTMTSIQAKSIPPLLAGRDVLGAARTGSGKTLAFLIPCVELLHRM--KFKPRNGTGI 98
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ E+ L + + GG ++E +++KG+++LVATPGRLL
Sbjct: 99 IIVSPTRELALQIFEVARDLMAYHSQTF-GVVMGGANQRAESEKLQKGVNLLVATPGRLL 157
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + IL + QS+L SAT T
Sbjct: 158 DHLQNTKGFVFRNLKALVIDEADRILEVGFEEEMKRIISILPNENR--QSMLFSATQT 213
>gi|254583416|ref|XP_002497276.1| ZYRO0F01826p [Zygosaccharomyces rouxii]
gi|238940169|emb|CAR28343.1| ZYRO0F01826p [Zygosaccharomyces rouxii]
Length = 769
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 333/634 (52%), Gaps = 78/634 (12%)
Query: 361 ISSLFQNNPDIP---NVPTRRLKPVSEALFAPTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I N R AP S + F GI + +L E M I +
Sbjct: 141 VSSLFTSNREISTAVNTNERDDSTEQAPSNAPLSGDSFEDLGIKGALLSHLKEKMKIQKP 200
Query: 416 TTVQQLSIQPILD-----GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
T++Q+L + +L D+ + +QTGSGKTLA+ +PI ++ +M+ ++ RK G +A+
Sbjct: 201 TSIQKLVLSHLLSQWTGQNDDLFINAQTGSGKTLAFLLPIFARILDMQTRVDRKSGCFAL 260
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I+ PTRELA Q + + + ++VP L GGE+ KSEKAR+RKG + +V TPGR+LD
Sbjct: 261 IVAPTRELASQIYSVASMISNCCHYLVPCLLIGGERKKSEKARLRKGCNFIVGTPGRVLD 320
Query: 531 HCKHTETLK--FSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQK------PQFQS-- 579
H ++T+ ++ FS+ + ++VLDE D++++ G+E I E L+I+ P S
Sbjct: 321 HLQNTKVIREQFSQSLRYVVLDEGDKLMELGFEETITEILKIVHDFPLDNSIFPSLPSRI 380
Query: 580 --ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLR 637
+L SATL V++L + LQN + I ++ + +PD L Q + PPKLR
Sbjct: 381 VHVLCSATLKGGVKKLGDVALQN---YKLLSNRQIEGSSTASEVPDQLLQKIAIVPPKLR 437
Query: 638 LVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLST-------VLGENIA--- 686
LV LA + ++ E + + +VF++ D ++H + S+ ++G+ +
Sbjct: 438 LVTLAGSLDTITKSHKGSESTCRTMVFLSCSDSVEFHFQAFSSSDEHHRNLVGDTVRLLT 497
Query: 687 ------------------FFKLHGSMSQSERTEVFKTF------RSVKSGVLICTDVAAR 722
F+KLHGS+SQ RT + F K ++ CTDVA+R
Sbjct: 498 KGNRILPSFTAGGDPETIFYKLHGSLSQPMRTATLEHFSRDDEASKGKHKIMFCTDVASR 557
Query: 723 GLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRI 782
GLDLP V +++ P S+ D++HR+GRTAR G G +LLFL+P E + + +R
Sbjct: 558 GLDLPHVGTVIEVDPPFSTEDHLHRIGRTARAGQSGEALLFLLPGEEEGYLDCI-KRFHP 616
Query: 783 EEIKL----KDCLQNL---LSVK---MEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
+ KL KD LQ + +SV EG S+ + ++ T ++ E +L+ + L
Sbjct: 617 KGWKLLKYDKDILQPVFQSMSVNRSDREGK-SKKEEDPWDSNVTTWHLNVERRMLEDQTL 675
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI----SGIGKPK 888
+ A KG+TS +R YA++ + FN K +HLGH AKSFALR+ P + S G +
Sbjct: 676 KSIAVKGFTSHIRAYATHIAAEKPFFNVKCLHLGHLAKSFALRERPKSLAQQSSKDGAKQ 735
Query: 889 NKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
E KN +K+K F + KQ SEF+
Sbjct: 736 TAENKKNTAKMGSKDKMF-HMARLAVKQSASEFN 768
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 175/340 (51%), Gaps = 63/340 (18%)
Query: 1 MNITQVTTVQQLSIQPILD-----GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 55
M I + T++Q+L + +L D+ + +QTGSGKTLA+ +PI ++ +M+ ++ RK
Sbjct: 195 MKIQKPTSIQKLVLSHLLSQWTGQNDDLFINAQTGSGKTLAFLLPIFARILDMQTRVDRK 254
Query: 56 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 115
G +A+I+ PTRELA Q + + + ++VP L GGE+ KSEKAR+RKG + +V T
Sbjct: 255 SGCFALIVAPTRELASQIYSVASMISNCCHYLVPCLLIGGERKKSEKARLRKGCNFIVGT 314
Query: 116 PGRLLDHCKHTETLK--FSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL 172
PGR+LDH ++T+ ++ FS+ + ++VLDE D++++ G+E I E L+I+
Sbjct: 315 PGRVLDHLQNTKVIREQFSQSLRYVVLDEGDKLMELGFEETITEILKIV-------HDFP 367
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
L ++ P+ S++ H++
Sbjct: 368 LDNSIFPSLP----------SRIVHVL--------------------------------- 384
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
SATL V++L + LQN + I ++ + +PD L Q + PPKLRLV
Sbjct: 385 -CSATLKGGVKKLGDVALQN---YKLLSNRQIEGSSTASEVPDQLLQKIAIVPPKLRLVT 440
Query: 293 LASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLST 331
LA + ++ E + + +VF++ D ++H + S+
Sbjct: 441 LAGSLDTITKSHKGSESTCRTMVFLSCSDSVEFHFQAFSS 480
>gi|449295712|gb|EMC91733.1| hypothetical protein BAUCODRAFT_38864 [Baudoinia compniacensis UAMH
10762]
Length = 747
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 200/622 (32%), Positives = 306/622 (49%), Gaps = 88/622 (14%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFP--------GIHPFMKKNLNEGMNI 412
ISSLF NP P + E P++ E G+ + +L +NI
Sbjct: 86 ISSLFTYNPVSSTKPVEKPSNGEEVPIEPSNAPEADVLSSFTGLGLSTTLASHLQRKLNI 145
Query: 413 TQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI-------SRK 464
T +Q+ +IQ + D D ++++TGSGKTLAY +PI+ ++ ++ ++ +R+
Sbjct: 146 KAPTAIQRKAIQQLCADDTDAFLQAETGSGKTLAYLLPIVNRIMQISKQMKAAGQNFTRE 205
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
G++A+I+ PTREL+ Q + L W++ S + GGEK KSEKAR+RKG++ILVAT
Sbjct: 206 SGLFAIILAPTRELSKQISTVLESLLSCCPWVITSTVIGGEKKKSEKARLRKGLNILVAT 265
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-----KKQKPQFQ- 578
PGRL DH T+ L KV LVLDE DR+++ G+E+D+ + L K +P
Sbjct: 266 PGRLADHVNSTDVLDLGKVRWLVLDEGDRLMELGFEKDLQRIIGALNMRARKALEPPIAG 325
Query: 579 ------SILLSATLTPAVQRLAGMTLQNPIQI-----DAADSTDIHNTTDSLVIPDSLKQ 627
++L SATL V++L + L+ P+ I +AA +TD+ + + P L+Q
Sbjct: 326 LPEKRTTVLCSATLKADVEQLQSIALKQPVSIAVGADEAAGNTDVASQVQAFSAPAQLRQ 385
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST-----VLG 682
+ + P K RLV L + + K + K +VF+ D D+H E+L+ L
Sbjct: 386 GYAIVPAKQRLVTLVALL--KQTFKRKGSVMKSIVFIDAADSVDFHFEVLTRGASQPTLS 443
Query: 683 ENIA-------------------------------------------FFKLHGSMSQSER 699
EN+A F+LHGS+ Q+ R
Sbjct: 444 ENVANPAVNTKGSEFRNTKPSIPQGQTIAESHTEGRGTFSGKDNEVRVFRLHGSLHQATR 503
Query: 700 TEVFKTFRS-VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
T K F + VL+ TDV +RGLD+P +D +++Y P+S D++HR+GRTAR G +G
Sbjct: 504 TSTLKAFSDCAQPAVLMATDVFSRGLDVPNIDLVIEYDPPASKDDHLHRIGRTARAGKDG 563
Query: 759 SSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATA 817
+++FL P E + L+ R R D LL ++ + AAT
Sbjct: 564 RAMVFLTPGCEEGYINILKEGRPRTLTRHEAD---ELLKKGFSPATGIVSAKSWAEAATE 620
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
Q+ E L+ A + Y S VR YA++ R IF+ +Q+HLGH AK+FALRD
Sbjct: 621 WQLDVERWALEHPKHLEQARRAYQSHVRAYATHVSAERGIFDMQQLHLGHLAKAFALRDK 680
Query: 878 PSVISGIGKPKNKEELKNKKMA 899
P+ I G+ K K + A
Sbjct: 681 PANIGVPGQRPGKSTTKARPRA 702
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 170/354 (48%), Gaps = 56/354 (15%)
Query: 1 MNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI------- 52
+NI T +Q+ +IQ + D D ++++TGSGKTLAY +PI+ ++ ++ ++
Sbjct: 143 LNIKAPTAIQRKAIQQLCADDTDAFLQAETGSGKTLAYLLPIVNRIMQISKQMKAAGQNF 202
Query: 53 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 112
+R+ G++A+I+ PTREL+ Q + L W++ S + GGEK KSEKAR+RKG++IL
Sbjct: 203 TRESGLFAIILAPTRELSKQISTVLESLLSCCPWVITSTVIGGEKKKSEKARLRKGLNIL 262
Query: 113 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKPQFQSI 171
VATPGRL DH T+ L KV LVLDE DR+++ G+E+D+ + L + + +
Sbjct: 263 VATPGRLADHVNSTDVLDLGKVRWLVLDEGDRLMELGFEKDLQRIIGALNMRARKALEPP 322
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
+ T C T LK Q QS
Sbjct: 323 IAGLPEKRTTVLCSAT----------------------------------LKADVEQLQS 348
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
+ L ++ AV +AA +TD+ + + P L+Q + + P K RLV
Sbjct: 349 IALKQPVSIAVG-----------ADEAAGNTDVASQVQAFSAPAQLRQGYAIVPAKQRLV 397
Query: 292 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDP 345
L + + K + K +VF+ D D+H E+L+ L E +P
Sbjct: 398 TLVALL--KQTFKRKGSVMKSIVFIDAADSVDFHFEVLTRGASQPTLSENVANP 449
>gi|403214761|emb|CCK69261.1| hypothetical protein KNAG_0C01480 [Kazachstania naganishii CBS
8797]
Length = 756
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 201/636 (31%), Positives = 328/636 (51%), Gaps = 75/636 (11%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFPGIH--PFMKKNLNEGMNITQV 415
+SSLF +N DI K S + AP + ++F +H + ++L M IT+
Sbjct: 121 VSSLFTSNRDIATSKNTNAKDESALVNPSNAPLTGDDFESLHTNETLVQHLKGKMEITKP 180
Query: 416 TTVQQLSIQPIL---DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ I ++ + D+ + +QTGSGKTLA+ +PI+ ++ +M+ + RK G +A++I
Sbjct: 181 TSIQKKVIPHLISPKNDNDLFINAQTGSGKTLAFLLPIVSQILDMKSHVHRKSGCFALVI 240
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q ++ +L + ++VP L GGE+ KSEKAR+RKG + +V TPGR+LDH
Sbjct: 241 APTRELASQIYQVALQLTQCCHFLVPCLLIGGERKKSEKARLRKGCNFIVGTPGRVLDHL 300
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKK---QKPQFQS------- 579
++T+ + S + +++LDE D++++ G+E + + L+I+ +F S
Sbjct: 301 QNTKVAREQLSSSLRYIILDEGDKLMELGFEETLTDILKIVHGIPLNSSKFPSLPNRIIH 360
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
IL SAT V++L + LQN ++ + ++ ++ +PD LKQ + PPKLRLV
Sbjct: 361 ILCSATTKGHVKKLGDVVLQN-YKLISGKEKGKYSKSELAAVPDQLKQTITIVPPKLRLV 419
Query: 640 ALA---SFILGKCQNVNEDEE----SKMLVFMATQDMADYHTELLS-------------- 678
L + I + + NED E ++ +VF++ D ++H E S
Sbjct: 420 TLGGELNNITKRHYHSNEDAEPGVTTRTMVFLSCSDSVEFHYEAFSSADSAYKNCVSDSV 479
Query: 679 -------TVL-------GENIAFFKLHGSMSQSERTEVFKTFRSVKSG------VLICTD 718
TVL + +KLHGS+SQ R+ K F + ++ CTD
Sbjct: 480 RELTRGSTVLPCFDLSKQPQVVLYKLHGSLSQPIRSSTLKHFSTDNDATKGKHLIMFCTD 539
Query: 719 VAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE-------VKL 771
VA+RGLDLP V +++ P S D++HR+GRTAR G G SLLFL+P E ++
Sbjct: 540 VASRGLDLPDVGAVIELDPPFSVEDHLHRIGRTARAGRSGESLLFLLPGEEEGYMDHIRK 599
Query: 772 VEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG----NVETAATALQMSFESAVL 827
L ++ +E L+ + L + + R + N +T AT ++ E +L
Sbjct: 600 YHPLGWSLVKYDEDILEPAFKALHVERSDKQQYRDENKKEVLNWDTNATTWHLNVERRIL 659
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ + A K Y S VR Y ++ + FN K +HLGH AKSF LR+ P +
Sbjct: 660 EDSTFKSVALKAYMSHVRAYTTHISSEKQFFNVKCLHLGHLAKSFGLRERPKSMGMQNNK 719
Query: 888 KNKEELKNKKMAINKEKSFKQR-GNFSKKQMLSEFD 922
K+ +NKK + K+ R + K+ +SEF+
Sbjct: 720 NGKDSSENKKPSKEGAKNKMWRMARNAVKESVSEFN 755
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 182/344 (52%), Gaps = 65/344 (18%)
Query: 1 MNITQVTTVQQLSIQPIL---DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M IT+ T++Q+ I ++ + D+ + +QTGSGKTLA+ +PI+ ++ +M+ + RK G
Sbjct: 175 MEITKPTSIQKKVIPHLISPKNDNDLFINAQTGSGKTLAFLLPIVSQILDMKSHVHRKSG 234
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q ++ +L + ++VP L GGE+ KSEKAR+RKG + +V TPG
Sbjct: 235 CFALVIAPTRELASQIYQVALQLTQCCHFLVPCLLIGGERKKSEKARLRKGCNFIVGTPG 294
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ + S + +++LDE D++++ G+E + + L+I+ I L+
Sbjct: 295 RVLDHLQNTKVAREQLSSSLRYIILDEGDKLMELGFEETLTDILKIV-------HGIPLN 347
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
++ P+ +RI+ +L
Sbjct: 348 SSKFPSL---------------------PNRII-----------------------HILC 363
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SAT V++L + LQN ++ + ++ ++ +PD LKQ + PPKLRLV L
Sbjct: 364 SATTKGHVKKLGDVVLQN-YKLISGKEKGKYSKSELAAVPDQLKQTITIVPPKLRLVTLG 422
Query: 295 ---SFILGKCQNVNEDEE----SKMLVFMATQDMADYHTELLST 331
+ I + + NED E ++ +VF++ D ++H E S+
Sbjct: 423 GELNNITKRHYHSNEDAEPGVTTRTMVFLSCSDSVEFHYEAFSS 466
>gi|395334120|gb|EJF66496.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 552
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 277/500 (55%), Gaps = 57/500 (11%)
Query: 399 HPFMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
PF + NL+E M + +TT+Q+ SI P+L G DVL ++TGSGKTLA+ IP +
Sbjct: 19 QPFSELNLSEPTMKALKEMGLETMTTIQEKSIPPLLAGKDVLGAARTGSGKTLAFLIPAV 78
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L R K ++G +II PTRELALQ E+ +L + + + GG K E+
Sbjct: 79 ELLH--RLKFKPRNGTGVIIISPTRELALQIFEVARELMQYHSQTF-GIIMGGATRKGEE 135
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+++KG+++L+ATPGRL+DH + T+ F ++ LV+DEADRIL+ G+E + + + L
Sbjct: 136 IKLQKGVNLLIATPGRLIDHLEGTKGFVFRNLKSLVIDEADRILEVGFEEQMKKIIATLP 195
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
+ Q S+L SAT T V LA ++L+ PI +D + D + +L Q ++
Sbjct: 196 NEGRQ--SMLFSATQTSKVTDLARISLRPGPILVDVDKTEDTSTVS-------TLTQGYV 246
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
V P R + L +F+ ++ + K +VF ++ YH ELL+ + ++ L
Sbjct: 247 VCPSDRRFLLLFTFL-------KKNMKKKTIVFFSSCRSVKYHAELLNYI---DVPVLDL 296
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG+ Q +RT F FR+ ++G+L+CT+VAARGLD+P VDWIVQY P DY+HRVGR
Sbjct: 297 HGNQKQQKRTATFMEFRNAETGILLCTNVAARGLDIPRVDWIVQYDPPDDPRDYIHRVGR 356
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADG 809
TAR G+ G SL+FL+PSE+ + L+ ++ + E D + N+ S L RL G
Sbjct: 357 TARAGNAGKSLMFLLPSELGFLRYLKEAKVPLNEYTFPADKISNIQS-----QLERLLQG 411
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
N L+ SA GY S+++ YASYS L+ I++ Q+ L
Sbjct: 412 NYH-------------------LYQSARDGYRSYLQAYASYS--LKKIYDVNQLDLTKVG 450
Query: 870 KSFALRDAPSVISGIGKPKN 889
KSF L P V +G K+
Sbjct: 451 KSFGLPVPPRVNLNVGGGKS 470
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + +TT+Q+ SI P+L G DVL ++TGSGKTLA+ IP ++ L R K ++G
Sbjct: 37 MGLETMTTIQEKSIPPLLAGKDVLGAARTGSGKTLAFLIPAVELLH--RLKFKPRNGTGV 94
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ E+ +L + + + GG K E+ +++KG+++L+ATPGRL+
Sbjct: 95 IIISPTRELALQIFEVARELMQYHSQTF-GIIMGGATRKGEEIKLQKGVNLLIATPGRLI 153
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T+ F ++ LV+DEADRIL+ G+E + + + L + QS+L SAT T
Sbjct: 154 DHLEGTKGFVFRNLKSLVIDEADRILEVGFEEQMKKIIATLPNEGR--QSMLFSATQT 209
>gi|330930172|ref|XP_003302922.1| hypothetical protein PTT_14919 [Pyrenophora teres f. teres 0-1]
gi|311321389|gb|EFQ88958.1| hypothetical protein PTT_14919 [Pyrenophora teres f. teres 0-1]
Length = 826
Score = 298 bits (764), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 213/618 (34%), Positives = 319/618 (51%), Gaps = 110/618 (17%)
Query: 361 ISSLFQNNPDI---PNVPTRRLK--PVSEALFAPTSYE--EFP--GIHPFMKKNLNEGMN 411
ISSLF NP P VP + PV E AP S E F GI + +L M
Sbjct: 139 ISSLFTYNPTSTTKPQVPEKHDDDAPV-EPSNAPLSSELDTFTSLGISTTLATHLLNKME 197
Query: 412 ITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE----MRPK-----I 461
+ T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E MR + +
Sbjct: 198 LKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANMRKRKVDENV 257
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEKAR+RKGI+IL
Sbjct: 258 QRNSGLFAIIMAPTRELSKQIAFVLEKLLGCAHWLVATTVIGGEKKKSEKARLRKGINIL 317
Query: 522 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-------KKQK 574
VATPGRL+DH +HTE L S V LVLDE DR+++ G+E++I + + L K +K
Sbjct: 318 VATPGRLVDHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGALNLRMRAKKDEK 377
Query: 575 PQF-------QSILLSATLTPAVQRLAGMTLQNPIQIDAADS---TDIHNTTD--SLVIP 622
+ ++L SAT+ V+RL ++L++ + I A S D+ +T D + P
Sbjct: 378 SRIPGLPEKRTTVLCSATMKMDVERLGQISLKDAVHIRADPSEKGADVGDTKDDQTFYAP 437
Query: 623 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL- 681
LKQ + V PKLRLV+L +++ K + K +VFM+ D D+H ++L++ L
Sbjct: 438 AQLKQSYAVVAPKLRLVSLMAYL--KRAFARKGSVMKAIVFMSCADSVDFHFDMLTSDLE 495
Query: 682 -------------------------------------------------GENIAFFKLHG 692
++ ++LHG
Sbjct: 496 GGAEKKKEDTDEEDTTDADKKKPKKNKAIQADPTKLEVTHAEAPILSARTHSVTAYRLHG 555
Query: 693 SMSQSERTEVFKTF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
S+ QS RT F ++ + VLI TDVA+RGLDLP VD ++++ + D++HR+GRT
Sbjct: 556 SLQQSLRTSTLAQFAKNKEPSVLIATDVASRGLDLPNVDLVIEFDPAFAREDHLHRIGRT 615
Query: 752 ARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD--LSR--L 806
AR G +G + +FL+P E V+ L++ R KD + + D L+R +
Sbjct: 616 ARAGRDGRACIFLMPGCEEGYVDVLKSDR--------KDTEAGFHISRQDADEILNRGLI 667
Query: 807 ADGNVET-----AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
G +E AT LQ++ E L +A + + S +R YA++ D R F+ K
Sbjct: 668 TSGVMEKNAYMDKATDLQLAIERWALASPSRLEAARRAFQSHIRAYATHVADERKYFDIK 727
Query: 862 QIHLGHFAKSFALRDAPS 879
+HLGH AK+FALR+ PS
Sbjct: 728 SLHLGHLAKAFALRERPS 745
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 64/346 (18%)
Query: 1 MNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE----MRPK---- 51
M + T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E MR +
Sbjct: 196 MELKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANMRKRKVDE 255
Query: 52 -ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGIS 110
+ R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEKAR+RKGI+
Sbjct: 256 NVQRNSGLFAIIMAPTRELSKQIAFVLEKLLGCAHWLVATTVIGGEKKKSEKARLRKGIN 315
Query: 111 ILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 170
ILVATPGRL+DH +HTE L S V LVLDE DR+++ G+E++I + + L +
Sbjct: 316 ILVATPGRLVDHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGALNLR------ 369
Query: 171 ILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 230
++ K DE RI +R
Sbjct: 370 -------------------MRAKK------DEKSRIPGLPEKR----------------T 388
Query: 231 SVLLSATLTPAVQRLAGMTLQNPIQIDAADS---TDIHNTTD--SLVIPDSLKQHFIVTP 285
+VL SAT+ V+RL ++L++ + I A S D+ +T D + P LKQ + V
Sbjct: 389 TVLCSATMKMDVERLGQISLKDAVHIRADPSEKGADVGDTKDDQTFYAPAQLKQSYAVVA 448
Query: 286 PKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
PKLRLV+L +++ K + K +VFM+ D D+H ++L++
Sbjct: 449 PKLRLVSLMAYL--KRAFARKGSVMKAIVFMSCADSVDFHFDMLTS 492
>gi|366998996|ref|XP_003684234.1| hypothetical protein TPHA_0B01270 [Tetrapisispora phaffii CBS 4417]
gi|357522530|emb|CCE61800.1| hypothetical protein TPHA_0B01270 [Tetrapisispora phaffii CBS 4417]
Length = 740
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 326/635 (51%), Gaps = 75/635 (11%)
Query: 356 VKSGPISSLFQNNPDI---PNVPTRRLKPVSEALFAPTSYEEF--PGIHPFMKKNLNEGM 410
+ S ++SLF +N I N+ + + AP ++F G+ + K+L+E +
Sbjct: 112 ISSQVVTSLFTSNRKIDTLKNINQKNEDEETNPSNAPLIADDFESSGVSDILVKHLHEKL 171
Query: 411 NITQVTTVQQLSIQPILDGG--DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
I + T++Q+L + +L D+ + +QTGSGKTLA+ +PI+ ++ M+ ++ RK G +
Sbjct: 172 KIDKPTSIQKLVLPQLLSNNNEDLFIHAQTGSGKTLAFLLPILSRILNMKTRVDRKSGCF 231
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+II+PTRELA Q ++ L ++VP L GGE KSEKAR+RKG + ++ TPGR+
Sbjct: 232 AIIIIPTRELAQQIYQVLISLTGCCHYLVPCLLIGGESKKSEKARLRKGCNFIIGTPGRV 291
Query: 529 LDHCKHTETLKF---SKVEHLVLDEADRILDQGYERDIAEFLEILKK---QKPQFQS--- 579
LDH ++TE++K + +L+ DE D++++ G+E +++ L ++ F S
Sbjct: 292 LDHFQNTESVKTQLGKSLRYLLFDEGDKLMELGFEETLSQILSLIHSIPIDTSAFPSLPS 351
Query: 580 ----ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPK 635
IL SAT V +L + L+N I + T+ +PD L Q + PPK
Sbjct: 352 RIVNILSSATTKGDVTKLGNVALKNYKMISNGKMDNNALTS----VPDQLVQSITIVPPK 407
Query: 636 LRLVALASFILGKCQNVNEDEE------SKMLVFMATQDMADYHTELLST-------VLG 682
LRLV L +++ C+ + + S+ ++F++ D D+H E+ S+ ++G
Sbjct: 408 LRLVTLGAYLDSLCKKHKQQKTKDASHVSRTIIFLSCADNVDFHYEVFSSSDSHHGNLVG 467
Query: 683 ENIAF---------------------FKLHGSMSQSERTEVFKTFR------SVKSGVLI 715
+++ +KLHGS++Q RT + F + K ++
Sbjct: 468 DSVRILTKGNTIFPSVDPEINPDVICYKLHGSLTQQMRTSTLQHFSKESETVAGKHLIMF 527
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE------- 768
CTDVA+RGLDLP V +++ P + D++HR+GRTAR G G SLLFL+P E
Sbjct: 528 CTDVASRGLDLPQVGTVIELDPPFAVEDHLHRIGRTARAGKSGESLLFLLPGEEEGYMEY 587
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+K + + + LK QN + + +R +D + AT ++ E +L+
Sbjct: 588 IKPYHPKGWKMLNYTDDILKPTFQNAAVSRNDKSKARNSD-EWDINATTWHLNLERRLLE 646
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPK 888
+ A K Y S R YA++ + FN K +HLGH AKSF LR+ P + G K
Sbjct: 647 DNYMKELAVKAYISHTRAYATHISKEKKFFNIKFVHLGHLAKSFGLRERPRTM-GFQTAK 705
Query: 889 NKE-ELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
++E E K K K K F+ ++KQ SEF+
Sbjct: 706 HEEAESKKAKRENPKNKMFRL-AREAQKQSFSEFN 739
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 173/342 (50%), Gaps = 66/342 (19%)
Query: 1 MNITQVTTVQQLSIQPILDGG--DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 58
+ I + T++Q+L + +L D+ + +QTGSGKTLA+ +PI+ ++ M+ ++ RK G
Sbjct: 171 LKIDKPTSIQKLVLPQLLSNNNEDLFIHAQTGSGKTLAFLLPILSRILNMKTRVDRKSGC 230
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+A+II+PTRELA Q ++ L ++VP L GGE KSEKAR+RKG + ++ TPGR
Sbjct: 231 FAIIIIPTRELAQQIYQVLISLTGCCHYLVPCLLIGGESKKSEKARLRKGCNFIIGTPGR 290
Query: 119 LLDHCKHTETLKF---SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
+LDH ++TE++K + +L+ DE D++++ G+E +++ L ++ SI +
Sbjct: 291 VLDHFQNTESVKTQLGKSLRYLLFDEGDKLMELGFEETLSQILSLI-------HSIPIDT 343
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
+ P+ RI++ +L S
Sbjct: 344 SAFPSL---------------------PSRIVN-----------------------ILSS 359
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT V +L + L+N I + T+ +PD L Q + PPKLRLV L +
Sbjct: 360 ATTKGDVTKLGNVALKNYKMISNGKMDNNALTS----VPDQLVQSITIVPPKLRLVTLGA 415
Query: 296 FILGKCQNVNEDEE------SKMLVFMATQDMADYHTELLST 331
++ C+ + + S+ ++F++ D D+H E+ S+
Sbjct: 416 YLDSLCKKHKQQKTKDASHVSRTIIFLSCADNVDFHYEVFSS 457
>gi|390604200|gb|EIN13591.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 576
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/509 (36%), Positives = 276/509 (54%), Gaps = 58/509 (11%)
Query: 400 PFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQ 452
PF + +L+E M T +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP I+
Sbjct: 26 PFSELDLSENTQNALKEMGFTHMTPIQEKSIPPLLTGKDVLGAARTGSGKTLAFLIPAIE 85
Query: 453 KLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKA 512
L M K ++G +I+ PTRELALQ + +L + GG K+E
Sbjct: 86 LLHRM--KFKPRNGTGVIIVSPTRELALQIFGVAKELMAHHPQTF-GIVMGGANRKAEVD 142
Query: 513 RIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK 572
+++KG+++LVATPGRL DH ++T+ F ++ LV+DEADRIL+ G+E ++ + + ++
Sbjct: 143 KLQKGVNLLVATPGRLWDHLENTKGFVFRNLKCLVIDEADRILEVGFEEEMKKIINMIPN 202
Query: 573 QKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ QS+L SAT T VQ LA ++L+ P+ ID H S V +L Q ++V
Sbjct: 203 E--NRQSMLFSATQTTKVQDLARISLRPGPLLIDVD-----HQEATSTV--STLSQGYVV 253
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P R + L +F+ ++ + K++VF ++ + YH ELL+ + ++ LH
Sbjct: 254 CPSDRRFLLLFTFL-------KKNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLDLH 303
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q +RT F F + +G+L+CTDVAARGLD+P VDWIVQY P DY+HRVGRT
Sbjct: 304 GKQKQQKRTNTFFEFMNAPAGILLCTDVAARGLDIPKVDWIVQYDPPDDPRDYIHRVGRT 363
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR G G SLLFL+PSE+ + L+ ++ + E R+A+
Sbjct: 364 ARAGKVGKSLLFLLPSELGFLRYLKEAKVPLNEFTFPK--------------ERIAN--- 406
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+Q E + + LH SA GY S+++ YASYS L+ IF+ Q+ L KS
Sbjct: 407 ------VQNQLEKLLTKNYFLHQSAKDGYRSYLQAYASYS--LKKIFDVNQLDLVKVGKS 458
Query: 872 FALRDAPSV---ISGIGKPKNKEELKNKK 897
F P V I+G G P + N K
Sbjct: 459 FGFAVPPRVNLNIAGSGTPGTGQSKGNNK 487
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP I+ L M K ++G
Sbjct: 43 MGFTHMTPIQEKSIPPLLTGKDVLGAARTGSGKTLAFLIPAIELLHRM--KFKPRNGTGV 100
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + GG K+E +++KG+++LVATPGRL
Sbjct: 101 IIVSPTRELALQIFGVAKELMAHHPQTF-GIVMGGANRKAEVDKLQKGVNLLVATPGRLW 159
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + + ++ + QS+L SAT T
Sbjct: 160 DHLENTKGFVFRNLKCLVIDEADRILEVGFEEEMKKIINMIPNE--NRQSMLFSATQT 215
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 19/156 (12%)
Query: 178 TPATCW--CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP W ++T+ F ++ LV+DEADRIL+ G+E ++ + + ++ + QS+L S
Sbjct: 154 TPGRLWDHLENTKGFVFRNLKCLVIDEADRILEVGFEEEMKKIINMIPNE--NRQSMLFS 211
Query: 236 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
AT T VQ LA ++L+ P+ ID H S V +L Q ++V P R + L
Sbjct: 212 ATQTTKVQDLARISLRPGPLLIDVD-----HQEATSTV--STLSQGYVVCPSDRRFLLLF 264
Query: 295 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+F+ ++ + K++VF ++ + YH ELL+
Sbjct: 265 TFL-------KKNLKKKVIVFFSSCNSVKYHAELLN 293
>gi|189205639|ref|XP_001939154.1| ATP-dependent RNA helicase DBP7 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975247|gb|EDU41873.1| ATP-dependent RNA helicase DBP7 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 826
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 317/623 (50%), Gaps = 120/623 (19%)
Query: 361 ISSLFQNNP--------------DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNL 406
ISSLF NP D P P+ P+S L TS GI + +L
Sbjct: 139 ISSLFTYNPTSTTKLQAPEKHEDDAPVEPSN--APLSSELDTFTSL----GISTTLATHL 192
Query: 407 NEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE----MRPK- 460
M + T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E MR +
Sbjct: 193 LNKMELKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANMRKRK 252
Query: 461 ----ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
+ R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEKAR+RK
Sbjct: 253 IDENVQRNSGLFAIIMAPTRELSKQIAFVLEKLLGCAHWLVATTVIGGEKKKSEKARLRK 312
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL------ 570
GI+ILVATPGRL+DH +HTE L S V LVLDE DR+++ G+E++I + + L
Sbjct: 313 GINILVATPGRLVDHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGALNLRMRA 372
Query: 571 -KKQKPQF-------QSILLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTD-- 617
K +K + ++L SAT+ V+RL ++L++ + I A D+ +T D
Sbjct: 373 KKDEKSRIPGLPEKRTTVLCSATMKMDVERLGQISLKDAVHIRADPLEKGPDVSDTKDDQ 432
Query: 618 SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 677
+ P LKQ + V PKLRLV+L +++ K + K +VFM+ D D+H ++L
Sbjct: 433 TFYAPAQLKQSYAVVAPKLRLVSLMAYL--KRAFARKGSVMKAIVFMSCADSVDFHFDIL 490
Query: 678 STVL--------------------------------------------------GENIAF 687
++ L ++
Sbjct: 491 TSDLEGGAEKNKEDTEEEDATDSDKKKAKKTKAIQADPTKLEVTHAEAPILSAKTHSVTA 550
Query: 688 FKLHGSMSQSERTEVFKTF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
++LHGS+ QS RT F ++ + VLI TDVA+RGLDLP VD ++++ + D++H
Sbjct: 551 YRLHGSLQQSLRTSTLAQFAKNKEPSVLIATDVASRGLDLPNVDLVIEFDPAFAREDHLH 610
Query: 747 RVGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD--L 803
R+GRTAR G +G + +FL+P E V+ L++ R KD + + + D L
Sbjct: 611 RIGRTARAGRDGRACIFLMPGCEEGYVDVLKSDR--------KDSEAGIHISRQDADEIL 662
Query: 804 SR--LADGNVET-----AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+R + G +E AT LQ++ E L +A + + S +R YA++ D R
Sbjct: 663 NRGLITSGVMEKNAYMDKATDLQLAIERWALASPSRLEAARRAFQSHIRAYATHVADERK 722
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
F+ K +HLGH AK+FALR+ PS
Sbjct: 723 YFDIKSLHLGHLAKAFALRERPS 745
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 183/346 (52%), Gaps = 64/346 (18%)
Query: 1 MNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE----MRPK---- 51
M + T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E MR +
Sbjct: 196 MELKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANMRKRKIDE 255
Query: 52 -ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGIS 110
+ R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEKAR+RKGI+
Sbjct: 256 NVQRNSGLFAIIMAPTRELSKQIAFVLEKLLGCAHWLVATTVIGGEKKKSEKARLRKGIN 315
Query: 111 ILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 170
ILVATPGRL+DH +HTE L S V LVLDE DR+++ G+E++I + + L +
Sbjct: 316 ILVATPGRLVDHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGALNLR------ 369
Query: 171 ILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 230
++ K DE RI +R
Sbjct: 370 -------------------MRAKK------DEKSRIPGLPEKR----------------T 388
Query: 231 SVLLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTD--SLVIPDSLKQHFIVTP 285
+VL SAT+ V+RL ++L++ + I A D+ +T D + P LKQ + V
Sbjct: 389 TVLCSATMKMDVERLGQISLKDAVHIRADPLEKGPDVSDTKDDQTFYAPAQLKQSYAVVA 448
Query: 286 PKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
PKLRLV+L +++ K + K +VFM+ D D+H ++L++
Sbjct: 449 PKLRLVSLMAYL--KRAFARKGSVMKAIVFMSCADSVDFHFDILTS 492
>gi|219123329|ref|XP_002181979.1| helicase_3 [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406580|gb|EEC46519.1| helicase_3 [Phaeodactylum tricornutum CCAP 1055/1]
Length = 540
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 183/503 (36%), Positives = 269/503 (53%), Gaps = 61/503 (12%)
Query: 431 DVLVRSQTGSGKTLAYAIPIIQKLQ-----EMRPKISRKDGIYAVIILPTRELALQTLEI 485
++L++S+TGSGKTLAY +PI+Q L E+R K G +I+ PTRELA QT+++
Sbjct: 23 NILLQSETGSGKTLAYLLPILQSLAVDKQGELRKLDRAKAGTKCIILCPTRELASQTVKV 82
Query: 486 FTKLCK-SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS--- 541
LC SF W+VP L G E+ KSEKA+IRKG+S++VATPGRLLDH TE+L +
Sbjct: 83 VENLCSHSFNWLVPGCLLGEERRKSEKAKIRKGLSLVVATPGRLLDHLTRTESLLMALKG 142
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-------QFQSILLSATLTPAVQRLA 594
K+E LVLDEADR+LD G + + ++ ++ +P ++S+L+SAT+TP++++LA
Sbjct: 143 KLEWLVLDEADRLLDMGLGEQVKQIVQRIRSNQPGSGRDGITWRSVLVSATVTPSIEKLA 202
Query: 595 GMTL----QNPIQIDAADSTDIHNTTD----SLVIPDSLKQHFIVTPPKLRLVALASFIL 646
TL + + + + + S P L Q + KLRL AL F+
Sbjct: 203 KETLLGGDNSWVWVKGGNDAQVAKVAAESEFSQSTPRQLAQFHMTVSAKLRLAALVGFLT 262
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLST---------------VLGENIAFFKLH 691
+ D+ + +VFM+T +YH L + G +LH
Sbjct: 263 QRA-----DKGERTVVFMSTCASVNYHHALFEGMDSVLEESDSDTGKGIFGTRCPIHRLH 317
Query: 692 GSMSQSERTEVFKTFRS-------VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDY 744
GS+ SER V + F ++ VL+CTDVAARGL+LP +W VQY PS DY
Sbjct: 318 GSVPHSERHLVLRKFTKEQIVGGKKQAAVLLCTDVAARGLNLPECEWTVQYDPPSEVADY 377
Query: 745 VHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIR-IEEIKLKDCLQNLLSVKMEGDL 803
VHR GR AR G G SL+FL+PSE ++ L+NR ++ + + L L ++ G
Sbjct: 378 VHRAGRVARAGKAGHSLIFLLPSERTFLDVLKNRGVKHMSALSLASTLNAAAAICGLGQS 437
Query: 804 SRLADGNVETAATALQMSFESAV--------LQQKILHTSACKGYTSWVRFYASYSKDLR 855
E T L E+ + + ++L A + S +R Y + K +R
Sbjct: 438 KLATSRRGEAFCTELHRRMENLIRTRAKPQEVSGQLLEL-ARAAFLSHLRAYPTKEKAVR 496
Query: 856 HIFNFKQIHLGHFAKSFALRDAP 878
HIF+ K +HLGH A+SFAL++ P
Sbjct: 497 HIFSAKALHLGHVARSFALKEPP 519
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 118/175 (67%), Gaps = 16/175 (9%)
Query: 22 DVLVRSQTGSGKTLAYAIPIIQKLQ-----EMRPKISRKDGIYAVIILPTRELALQTLEI 76
++L++S+TGSGKTLAY +PI+Q L E+R K G +I+ PTRELA QT+++
Sbjct: 23 NILLQSETGSGKTLAYLLPILQSLAVDKQGELRKLDRAKAGTKCIILCPTRELASQTVKV 82
Query: 77 FTKLCK-SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS--- 132
LC SF W+VP L G E+ KSEKA+IRKG+S++VATPGRLLDH TE+L +
Sbjct: 83 VENLCSHSFNWLVPGCLLGEERRKSEKAKIRKGLSLVVATPGRLLDHLTRTESLLMALKG 142
Query: 133 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-------QFQSILLSATLTPA 180
K+E LVLDEADR+LD G + + ++ ++ +P ++S+L+SAT+TP+
Sbjct: 143 KLEWLVLDEADRLLDMGLGEQVKQIVQRIRSNQPGSGRDGITWRSVLVSATVTPS 197
>gi|358055768|dbj|GAA98113.1| hypothetical protein E5Q_04796 [Mixia osmundae IAM 14324]
Length = 620
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 188/529 (35%), Positives = 287/529 (54%), Gaps = 68/529 (12%)
Query: 379 LKPVSEALFAPTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGD 431
LKPV + + ++ P PF L+E M T +T VQ I PI+ G D
Sbjct: 83 LKPVQD------TADQVPARLPFSSLELSEQTSKAIQEMGFTTMTEVQARCIGPIMAGRD 136
Query: 432 VLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCK 491
VL +QTGSGKTLA+ +P I+ L ++R K ++G ++I PTRELALQ + +LCK
Sbjct: 137 VLGAAQTGSGKTLAFLLPAIEMLHQLRFKP--RNGTGVIVISPTRELALQIFGVVKELCK 194
Query: 492 SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEA 551
+ + GG K+E ++ KG++++V TPGRLLDH ++T+ F ++ LV+DEA
Sbjct: 195 HHNQTF-AIVMGGANRKAEAEKLVKGVNLVVGTPGRLLDHLQNTKGFIFKNLKQLVIDEA 253
Query: 552 DRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQIDAADST 610
DRIL+ G+E ++ + ++IL Q++L SAT T V LA ++L Q P+ I+
Sbjct: 254 DRILEIGFEDEMRQIVKILPND--NRQTMLFSATQTTKVSDLARVSLRQGPLYIN----V 307
Query: 611 DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 670
D H T ++ L+Q ++V R + L +F+ ++ + K++VF ++ +
Sbjct: 308 DSHRDTSTVA---GLEQGYVVCDSDKRFLLLFTFL-------RKNIKKKIIVFFSSCNSV 357
Query: 671 DYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVD 730
YH ELL+ V +I LHG Q +RT F F + SGVL+CTDVAARGLD+P VD
Sbjct: 358 KYHGELLNYV---DIPVLDLHGKQKQQKRTNTFFEFCNAPSGVLLCTDVAARGLDIPKVD 414
Query: 731 WIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDC 790
WI+Q+ P DY+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E +
Sbjct: 415 WILQFDPPDDPRDYIHRVGRTARAGKAGRSLLFLLPSELGFLRFLKIAKVPLNEYSFPN- 473
Query: 791 LQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASY 850
++A+ +Q E + + LH SA G+ S+++ YASY
Sbjct: 474 -------------EKIAN---------IQGQLEKLITKNYYLHQSARDGFRSYIQSYASY 511
Query: 851 SKDLRHIFNFKQIHLGHFAKSFALRDAPSV-------ISGIGKPKNKEE 892
S L+ IFN + L AK+F P++ + G K KN+++
Sbjct: 512 S--LKKIFNVHDLDLAKVAKAFGFSVPPAINIPVGTNLKGDKKRKNRDD 558
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ I PI+ G DVL +QTGSGKTLA+ +P I+ L ++R K ++G
Sbjct: 115 MGFTTMTEVQARCIGPIMAGRDVLGAAQTGSGKTLAFLLPAIEMLHQLRFKP--RNGTGV 172
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +LCK + + GG K+E ++ KG++++V TPGRLL
Sbjct: 173 IVISPTRELALQIFGVVKELCKHHNQTF-AIVMGGANRKAEAEKLVKGVNLVVGTPGRLL 231
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL Q++L SAT T
Sbjct: 232 DHLQNTKGFIFKNLKQLVIDEADRILEIGFEDEMRQIVKILPND--NRQTMLFSATQT 287
>gi|384495140|gb|EIE85631.1| ATP-dependent RNA helicase HAS1 [Rhizopus delemar RA 99-880]
Length = 502
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 280/488 (57%), Gaps = 50/488 (10%)
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
+KK + E M TQ+T VQ +I +L+G DVL ++TGSGKTLA+ IP I+ L +R K
Sbjct: 64 IKKAIKE-MGFTQMTEVQAKTIPALLEGKDVLGAAKTGSGKTLAFLIPAIELL--VRQKF 120
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
+ G V++ PTRELA+Q + +LCK + I + GG K+E ++ KG+++L
Sbjct: 121 KSRHGTGIVVVSPTRELAIQIYGVVEELCK-YVQISHGIVIGGANRKAESDKLMKGVNLL 179
Query: 522 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL 581
VATPGRLLDH ++T+ F++++ LV+DEADRIL+ G+E ++ + L+IL ++ QS+L
Sbjct: 180 VATPGRLLDHLQNTQGFIFNRLQALVIDEADRILEIGFEEEMKQILKILPTER---QSML 236
Query: 582 LSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 640
SAT T V LA ++L+ +P+ I+ + D D L+Q F+ R +
Sbjct: 237 FSATQTNKVSDLAKLSLKGDPVYINVDEQKDTSTA-------DGLEQGFVTVDGDKRFLL 289
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERT 700
L +F+ ++++ K++VF ++ + Y++ELL+ + ++ +LHG Q +RT
Sbjct: 290 LFTFL-------RKNQKKKVIVFFSSCNAVKYYSELLNYI---DVPVMELHGRQKQQKRT 339
Query: 701 EVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSS 760
F F + + G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR G +G S
Sbjct: 340 TTFFDFCNAEKGILLCTDVAARGLDIPDVDWIVQFDPPDDPRDYIHRVGRTARAGGKGRS 399
Query: 761 LLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
LLFL+P+E ++ L+ ++ + E + S++A+ +Q
Sbjct: 400 LLFLLPTETGFLKYLKEAKVPLNEYQFP--------------TSKIAN---------VQS 436
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E + + L+ SA + S+++ YA+Y L+ IF+ ++ L AKSF + P V
Sbjct: 437 QLEQLIEKNFYLNQSARDAFRSYLQSYATYH--LKSIFDVNKLDLAKIAKSFGFKVPPKV 494
Query: 881 ISGIGKPK 888
I K
Sbjct: 495 NLAISAAK 502
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 119/178 (66%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M TQ+T VQ +I +L+G DVL ++TGSGKTLA+ IP I+ L +R K + G
Sbjct: 71 MGFTQMTEVQAKTIPALLEGKDVLGAAKTGSGKTLAFLIPAIELL--VRQKFKSRHGTGI 128
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELA+Q + +LCK + I + GG K+E ++ KG+++LVATPGRLL
Sbjct: 129 VVVSPTRELAIQIYGVVEELCK-YVQISHGIVIGGANRKAESDKLMKGVNLLVATPGRLL 187
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F++++ LV+DEADRIL+ G+E ++ + L+IL ++ QS+L SAT T
Sbjct: 188 DHLQNTQGFIFNRLQALVIDEADRILEIGFEEEMKQILKILPTER---QSMLFSATQT 242
>gi|15229677|ref|NP_188490.1| DEAD-box ATP-dependent RNA helicase 51 [Arabidopsis thaliana]
gi|75335038|sp|Q9LIH9.1|RH51_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 51
gi|9294321|dbj|BAB02218.1| DEAD-box ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|17979083|gb|AAL49809.1| putative DEAD box helicase protein [Arabidopsis thaliana]
gi|20465335|gb|AAM20071.1| putative DEAD box helicase protein [Arabidopsis thaliana]
gi|332642600|gb|AEE76121.1| DEAD-box ATP-dependent RNA helicase 51 [Arabidopsis thaliana]
Length = 568
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 275/482 (57%), Gaps = 53/482 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q SIQP+L+G DVL ++TGSGKTLA+ IP ++ L + + S ++G
Sbjct: 107 MGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELL--FKERFSPRNGTGV 164
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT + +L K + V S + GG +SE RI G ++++ATPGRLL
Sbjct: 165 IVICPTRELAIQTKNVAEELLKHHSQTV-SMVIGGNNRRSEAQRIASGSNLVIATPGRLL 223
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + ++ LV+DEADRIL++ +E D+ + L+IL K + Q+ L SAT T
Sbjct: 224 DHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR---QTALFSATQTSK 280
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
V+ LA ++L +P+ +D D V + L+Q + V P K RL+ L SF+
Sbjct: 281 VKDLARVSLTSPVHVDVDDGR-------RKVTNEGLEQGYCVVPSKQRLILLISFLK--- 330
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
+N+N+ K++VF +T +HTE++ ++ +HG M Q+ RT+ F F
Sbjct: 331 KNLNK----KIMVFFSTCKSVQFHTEIMKI---SDVDVSDIHGGMDQNRRTKTFFDFMKA 383
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPSE 768
K G+L+CTDVAARGLD+P VDWI+QY P T+Y+HRVGRTAR G +G +LL LIP E
Sbjct: 384 KKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEE 443
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
++ + L+ ++ ++E++ + RL++ +Q + E V +
Sbjct: 444 LQFIRYLKAAKVPVKELEFNE--------------KRLSN---------VQSALEKCVAK 480
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI----SGI 884
L+ A Y +++ Y S+S L+ IFN ++ L A+SF P V SG
Sbjct: 481 DYNLNKLAKDAYRAYLSAYNSHS--LKDIFNVHRLDLLAVAESFCFSSPPKVNLNIESGA 538
Query: 885 GK 886
GK
Sbjct: 539 GK 540
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 130/216 (60%), Gaps = 14/216 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SIQP+L+G DVL ++TGSGKTLA+ IP ++ L + + S ++G
Sbjct: 107 MGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELL--FKERFSPRNGTGV 164
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L K + V S + GG +SE RI G ++++ATPGRLL
Sbjct: 165 IVICPTRELAIQTKNVAEELLKHHSQTV-SMVIGGNNRRSEAQRIASGSNLVIATPGRLL 223
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + ++ LV+DEADRIL++ +E D+ + L+IL K + Q+ L SAT
Sbjct: 224 DHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR---QTALFSAT---Q 277
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI-----LDQGY 211
T K + + H+ +D+ R L+QGY
Sbjct: 278 TSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGY 313
>gi|401624894|gb|EJS42933.1| dbp7p [Saccharomyces arboricola H-6]
Length = 741
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 206/639 (32%), Positives = 322/639 (50%), Gaps = 83/639 (12%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + S A+ AP + F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDESVAINPSNAPLKSDLFASLGVSDVLVSHLEQKMRIQKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A+I+
Sbjct: 168 TSIQKQAIPQIMANAGKNDFFIHAQTGSGKTLSYLLPIISTVLNMETHVDRSSGAFALIV 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q ++ + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYQVCSTLISCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRILDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+ + I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISNIINIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V +L + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNKLRNVALKDYKLISNGTKKDSDAVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQN-VNEDEESKML---VFMATQDMADYHTELLSTVLGE------------ 683
LA+ + ++ V D +SK L VF++ D ++H + S G
Sbjct: 405 TLAATLNNITKDFVASDPQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDSVRLL 464
Query: 684 ----------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICTDVAA 721
N+ +KLHGS+SQ RT + F K ++ CTDVA+
Sbjct: 465 TKGNTMFPCFSGSEDPNMVIYKLHGSLSQQARTSTLQHFARDNETTKGKHLIMFCTDVAS 524
Query: 722 RGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ---- 776
RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 525 RGLDLPQVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQPYHP 584
Query: 777 --------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN-----VETAATALQMSFE 823
++ I + K + +N ++ + S+ DG+ +T AT ++ E
Sbjct: 585 MGWELLQFDKEILMPAFKDVNVNRNDKFIRKDDKPSKNKDGDDKEYEWDTNATTWHLNIE 644
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
V+ L A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P + G
Sbjct: 645 RRVVGDSTLKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPKAM-G 703
Query: 884 IGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ K+ K K +K K F+ ++KQ+ SEF+
Sbjct: 704 LQSSKDGNSEKPAKEN-SKNKMFRM-ARMAEKQIASEFN 740
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 169/340 (49%), Gaps = 64/340 (18%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIQKPTSIQKQAIPQIMANAGKNDFFIHAQTGSGKTLSYLLPIISTVLNMETHVDRSSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A+I+ PTRELA Q ++ + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALIVAPTRELASQIYQVCSTLISCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+ + I+ I ++
Sbjct: 282 RILDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISNIINIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V +L + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNKLRNVALKDYKLISNGTKKDSDAVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQN-VNEDEESKML---VFMATQDMADYHTELLS 330
+ + ++ V D +SK L VF++ D ++H + S
Sbjct: 408 ATLNNITKDFVASDPQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|400601869|gb|EJP69494.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 754
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 292/546 (53%), Gaps = 62/546 (11%)
Query: 410 MNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----QEMRPKISR 463
MN+ + T +QQ I +L GD V+++TGSGKT +Y +PI+ ++ Q +I R
Sbjct: 170 MNLERPTAIQQKVIPHMLTSSGDAFVQAETGSGKTFSYLLPILHRVLQLSAQNDGKQIHR 229
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
GI+A++I PTRELA QT + +L + F W+V + +TGGE K+EKARIRKGI+ LVA
Sbjct: 230 DSGIFAILIAPTRELAKQTHTVLEQLIRPFPWLVSTAITGGESKKAEKARIRKGINFLVA 289
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------- 574
TPGRL DH +T+ L V LVLDE DR++D G+E D+ + ++ L++ +
Sbjct: 290 TPGRLADHIDNTKALNLGTVRWLVLDEGDRLMDLGFEDDLKKVIDALREIEIANETTNGT 349
Query: 575 -----PQFQ-SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
P + +IL SAT+ VQ+L ++L + + + A + P L Q
Sbjct: 350 PLAALPDRRVTILCSATMKMNVQKLGELSLADAVFLSAEKGEMTADENIEHKAPAQLHQT 409
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL------------ 676
++ P KLRLV L ++ K + K+++FM+ D D+H EL
Sbjct: 410 HVIVPAKLRLVTLVCYL--KSLFSRKGHTMKVIIFMSCADAVDFHFELFRDPKDAEAPPA 467
Query: 677 -----------------LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS-GVLICTD 718
+++ + ++HGS+SQ R+ +TF + KS VLI TD
Sbjct: 468 EPKDVELVSKTVARAAYVTSAASPEVVLHRMHGSLSQPIRSATLRTFSACKSPSVLITTD 527
Query: 719 VAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP-SEVKLVEELQN 777
V++RGLD+P VD +++Y S D++HR+GRTAR G G ++LFL+P SE VE L+
Sbjct: 528 VSSRGLDIPSVDLVIEYDPAFSFADHIHRIGRTARAGRAGEAVLFLLPGSEEGYVELLKA 587
Query: 778 R---RIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV-ETAATALQMSFESAVLQQKILH 833
+ E LK L + L +E ++L +G A +Q+ FE +L+
Sbjct: 588 SGAPTAQSYEAILKTGLMSKLEFPVE-TAAQLTEGQTYHDKAETMQLHFEQRLLEDPRRL 646
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
A G+ S +R YA++ K+ R F+ ++HLGH AKS+ALR+ P G+G +++
Sbjct: 647 ELARNGFKSHIRAYATHIKEERVHFDIAELHLGHTAKSYALREPP---RGVGAGVDRKVR 703
Query: 894 KNKKMA 899
K K A
Sbjct: 704 KGAKGA 709
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 179/373 (47%), Gaps = 65/373 (17%)
Query: 1 MNITQVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----QEMRPKISR 54
MN+ + T +QQ I +L GD V+++TGSGKT +Y +PI+ ++ Q +I R
Sbjct: 170 MNLERPTAIQQKVIPHMLTSSGDAFVQAETGSGKTFSYLLPILHRVLQLSAQNDGKQIHR 229
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
GI+A++I PTRELA QT + +L + F W+V + +TGGE K+EKARIRKGI+ LVA
Sbjct: 230 DSGIFAILIAPTRELAKQTHTVLEQLIRPFPWLVSTAITGGESKKAEKARIRKGINFLVA 289
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK----QKPQFQS 170
TPGRL DH +T+ L V LVLDE DR++D G+E D+ + ++ L++ + +
Sbjct: 290 TPGRLADHIDNTKALNLGTVRWLVLDEGDRLMDLGFEDDLKKVIDALREIEIANETTNGT 349
Query: 171 ILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 230
L + T C T + K+ L L +A
Sbjct: 350 PLAALPDRRVTILCSATMKMNVQKLGELSLADA--------------------------- 382
Query: 231 SVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 290
V LSA MT I+ A P L Q ++ P KLRL
Sbjct: 383 -VFLSA-------EKGEMTADENIEHKA---------------PAQLHQTHVIVPAKLRL 419
Query: 291 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEI 350
V L ++ K + K+++FM+ D D+H EL + K + +P + E+
Sbjct: 420 VTLVCYL--KSLFSRKGHTMKVIIFMSCADAVDFHFELF---RDPKDAEAPPAEPKDVEL 474
Query: 351 PKKTEVKSGPISS 363
KT ++ ++S
Sbjct: 475 VSKTVARAAYVTS 487
>gi|409051397|gb|EKM60873.1| hypothetical protein PHACADRAFT_110678 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 269/490 (54%), Gaps = 57/490 (11%)
Query: 400 PFMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQ 452
PF + L+E GM T +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP ++
Sbjct: 23 PFSELELSEPTIKALSGMGFTHMTAIQEKSIPPLLAGKDVLGAARTGSGKTLAFLIPAVE 82
Query: 453 KLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKA 512
L M K ++G VI+ PTRELALQ + +L + + GG ++E
Sbjct: 83 LLHRM--KFKPRNGTGIVIVSPTRELALQIFGVAKELMAHHSQTF-GIVMGGANRRAEAD 139
Query: 513 RIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK 572
+++KG++++VATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + + IL
Sbjct: 140 KLQKGVNLVVATPGRLLDHLENTKGFVFRNLKCLVIDEADRILEVGFEEEMKKIIAILPN 199
Query: 573 QKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ Q S+L SAT T V LA ++L+ P+ ID + T+S +L Q ++V
Sbjct: 200 ENRQ--SMLFSATQTTKVTDLARISLRPGPLYIDV-------DKTESTSTVSTLSQGYVV 250
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P R + L +F+ + + K++VF ++ + YH ELL+ + ++ LH
Sbjct: 251 CPSDRRFLLLFTFL-------KKHMKKKIVVFFSSCNSVKYHAELLNYI---DVPTLDLH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q +RT F F + +SG+L+CTDVAARGLD+P VDWI+QY P DY+HRVGRT
Sbjct: 301 GKQKQQKRTNTFFEFCNAESGILLCTDVAARGLDIPRVDWIIQYDPPDDPRDYIHRVGRT 360
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGN 810
AR G G SL+FL+PSE+ + L+ ++ + E D + N
Sbjct: 361 ARAGKVGKSLMFLLPSELGFLRFLKEAKVPLNEFSFPADKIAN----------------- 403
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+Q E + + LH SA G+ S+++ YASYS L+ IF+ Q+ L K
Sbjct: 404 -------VQSQLEKLLQKNYFLHQSAKDGFRSYLQAYASYS--LKKIFDVNQLDLAKVGK 454
Query: 871 SFALRDAPSV 880
+F P V
Sbjct: 455 AFGFSVPPRV 464
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP ++ L M K ++G
Sbjct: 40 MGFTHMTAIQEKSIPPLLAGKDVLGAARTGSGKTLAFLIPAVELLHRM--KFKPRNGTGI 97
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VI+ PTRELALQ + +L + + GG ++E +++KG++++VATPGRLL
Sbjct: 98 VIVSPTRELALQIFGVAKELMAHHSQTF-GIVMGGANRRAEADKLQKGVNLVVATPGRLL 156
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + + IL + QS+L SAT T
Sbjct: 157 DHLENTKGFVFRNLKCLVIDEADRILEVGFEEEMKKIIAILPNENR--QSMLFSATQT 212
>gi|353236321|emb|CCA68318.1| related to DBP7-RNA helicase required for 60S ribosomal subunit
assembly [Piriformospora indica DSM 11827]
Length = 793
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 305/620 (49%), Gaps = 106/620 (17%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPV-------SEALFAPTSYEEFPGIHPFMKKNLNEGMNIT 413
+SSLF +NP +P T P+ S A +S E G+H + +L MNI
Sbjct: 90 VSSLFTSNPLVPKASTSL--PIYTTPALPSNAPLTDSSTFEGVGLHKLLINHLQGKMNIQ 147
Query: 414 QVTTVQQLSI----QPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRP--KISRK 464
+ T++Q+ ++ +P D D+ ++SQTGSGKTLA+ +PIIQ L + I R
Sbjct: 148 KPTSIQRAALPHLLRPYDDKSPPPDIFLQSQTGSGKTLAFLLPIIQDLLPLSSLSYIDRS 207
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKS----------------FTWIVPSWLTGGEKMK 508
G A+II PTRELA Q ++ L K W+V L+GG
Sbjct: 208 IGTLAIIIAPTRELAKQISDVLETLLKMRLRESQEISDDTEPRLTRWLVSGLLSGGATRA 267
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
EKAR+RKG+ ILVATPGRLLDH +++ + K LVLDEADR++D G+E I L+
Sbjct: 268 HEKARLRKGLPILVATPGRLLDHLQNSTSFNVGKCRWLVLDEADRLMDLGFEETIQGILK 327
Query: 569 ILKKQKP--------------------QFQSILLSATLTPAVQRLAGMTLQNPIQI---- 604
L ++ + ++IL SAT+ VQ+LAG L+ PI I
Sbjct: 328 GLDGRRKLAMKAVEQGQGMEVGGWEWRERRTILCSATIREDVQKLAGTALKRPIVIRGSL 387
Query: 605 -DAADSTDI--HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG-KCQNVNEDEESKM 660
D D+ + + + P L Q +IVTP KLRLV L + + + +++
Sbjct: 388 DDPNDTQPVQAQSQAEHFAPPSQLSQKYIVTPLKLRLVTLVALLRSLLADGARRRDPTRI 447
Query: 661 LVFMATQDMADYHTELL--STVLGENI--------------------AFFKLHGSMSQSE 698
+VF+++ D D+H LL +T+ GE+ ++LHGS+ +
Sbjct: 448 IVFLSSTDSVDFHWSLLGKATMGGEDTDKGPSEPDQVSVQSSLLPDAIVYRLHGSLPLAT 507
Query: 699 RTEVFKTFRSVK-------------SGVLICTDVAARGLDLPLVDWIVQYTAPS--SSTD 743
R F K S +L+CT VA+RGLDLP V ++QY P+ +T+
Sbjct: 508 RLASVSGFAGKKNKSSKSNIAEAQSSTILLCTSVASRGLDLPQVRAVIQYDLPTEGGATE 567
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
Y+HRVGRTAR G G + F+ PSE + V L+ R+ +D L +
Sbjct: 568 YIHRVGRTARAGKGGEAWSFVCPSEAEWVPWLEE---RLSTSSAEDTPTAKLHAVDNAVV 624
Query: 804 SRLADGN----VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
R G E AT +Q++FE VL K A G+ S +R YA++ D +HIF+
Sbjct: 625 LRKGFGGKGTEYEERATEVQLAFERWVLASKENAELARSGFKSHLRAYATHPADEKHIFH 684
Query: 860 FKQIHLGHFAKSFALRDAPS 879
+ +H GH AK+FALRDAPS
Sbjct: 685 VRNLHSGHLAKAFALRDAPS 704
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 173/362 (47%), Gaps = 74/362 (20%)
Query: 1 MNITQVTTVQQLSI----QPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRP--K 51
MNI + T++Q+ ++ +P D D+ ++SQTGSGKTLA+ +PIIQ L +
Sbjct: 144 MNIQKPTSIQRAALPHLLRPYDDKSPPPDIFLQSQTGSGKTLAFLLPIIQDLLPLSSLSY 203
Query: 52 ISRKDGIYAVIILPTRELALQTLEIFTKLCKS----------------FTWIVPSWLTGG 95
I R G A+II PTRELA Q ++ L K W+V L+GG
Sbjct: 204 IDRSIGTLAIIIAPTRELAKQISDVLETLLKMRLRESQEISDDTEPRLTRWLVSGLLSGG 263
Query: 96 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 155
EKAR+RKG+ ILVATPGRLLDH +++ + K LVLDEADR++D G+E I
Sbjct: 264 ATRAHEKARLRKGLPILVATPGRLLDHLQNSTSFNVGKCRWLVLDEADRLMDLGFEETIQ 323
Query: 156 EFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDI 215
L+ L ++ L VE QG E
Sbjct: 324 GILKGLDGRR-----------------------KLAMKAVEQ----------GQGMEVGG 350
Query: 216 AEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQI-----DAADSTDI--HNTT 268
E+ E +++L SAT+ VQ+LAG L+ PI I D D+ + +
Sbjct: 351 WEWRE--------RRTILCSATIREDVQKLAGTALKRPIVIRGSLDDPNDTQPVQAQSQA 402
Query: 269 DSLVIPDSLKQHFIVTPPKLRLVALASFILG-KCQNVNEDEESKMLVFMATQDMADYHTE 327
+ P L Q +IVTP KLRLV L + + + ++++VF+++ D D+H
Sbjct: 403 EHFAPPSQLSQKYIVTPLKLRLVTLVALLRSLLADGARRRDPTRIIVFLSSTDSVDFHWS 462
Query: 328 LL 329
LL
Sbjct: 463 LL 464
>gi|323354148|gb|EGA85994.1| Dbp7p [Saccharomyces cerevisiae VL3]
Length = 742
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 323/643 (50%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVXSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRX-ARMAEKQIASEFN 741
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|6322876|ref|NP_012949.1| Dbp7p [Saccharomyces cerevisiae S288c]
gi|549597|sp|P36120.1|DBP7_YEAST RecName: Full=ATP-dependent RNA helicase DBP7; AltName: Full=DEAD
box protein 7
gi|486449|emb|CAA82096.1| DBP7 [Saccharomyces cerevisiae]
gi|285813282|tpg|DAA09179.1| TPA: Dbp7p [Saccharomyces cerevisiae S288c]
gi|392298166|gb|EIW09264.1| Dbp7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 742
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 323/643 (50%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVSSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRM-ARMAEKQIASEFN 741
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|160380629|sp|A6ZZY8.1|DBP7_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP7; AltName: Full=DEAD
box protein 7
gi|151941568|gb|EDN59931.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
Length = 742
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 323/643 (50%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVTSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRM-ARMAEKQIASEFN 741
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|297834766|ref|XP_002885265.1| hypothetical protein ARALYDRAFT_479365 [Arabidopsis lyrata subsp.
lyrata]
gi|297331105|gb|EFH61524.1| hypothetical protein ARALYDRAFT_479365 [Arabidopsis lyrata subsp.
lyrata]
Length = 569
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 264/472 (55%), Gaps = 49/472 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q SI+P+L+G DVL ++TGSGKTLA+ IP ++ L ++ S ++G
Sbjct: 112 MGFQYMTQIQAGSIRPLLEGKDVLGAARTGSGKTLAFLIPAVELL--LKHHFSPRNGTGV 169
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT + +L K + V + GG +SE RI G ++L+ATPGRLL
Sbjct: 170 IVICPTRELAIQTKNVAEELLKHHSQTV-GMVIGGNNRRSEAQRIANGSNLLIATPGRLL 228
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +T+ + ++ LV+DEADRIL+ +E D+ + L+IL K + Q+ L SAT T
Sbjct: 229 DHLHNTKAFIYKHLKCLVIDEADRILEDNFEEDMNKILKILPKTR---QTALFSATQTSK 285
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
V+ LA ++L +P+ +D D V + L+Q + V P K RL+ L +F+
Sbjct: 286 VKDLARVSLTSPVHVDVDDGR-------RKVTNEGLEQGYCVVPSKNRLILLITFL---- 334
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
++ K++VF +T +H E++ N+ F +HG + Q+ RT+ F F
Sbjct: 335 ---KKNPNKKIMVFFSTCKSVQFHAEIMKI---SNVDFCDIHGGLDQNRRTKTFFDFMKA 388
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSE 768
K G+L+CTDVAARGLD+P VDWI+QY P T+Y+HRVGRTAR G +G +LL LIP E
Sbjct: 389 KKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEE 448
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
++ + L+ ++ ++E++ + + L++V+ E E V +
Sbjct: 449 LQFIRYLKAAKVPVKELEFNE--RKLMNVRSE---------------------LEKCVAE 485
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+ A Y +++ Y S+S L+ IFN ++ L A SF P V
Sbjct: 486 DYNLNKLAKDAYRAYISAYNSHS--LKDIFNVHRLDLQEVAASFCFSAPPKV 535
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 127/216 (58%), Gaps = 14/216 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI+P+L+G DVL ++TGSGKTLA+ IP ++ L ++ S ++G
Sbjct: 112 MGFQYMTQIQAGSIRPLLEGKDVLGAARTGSGKTLAFLIPAVELL--LKHHFSPRNGTGV 169
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L K + V + GG +SE RI G ++L+ATPGRLL
Sbjct: 170 IVICPTRELAIQTKNVAEELLKHHSQTV-GMVIGGNNRRSEAQRIANGSNLLIATPGRLL 228
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +T+ + ++ LV+DEADRIL+ +E D+ + L+IL K + Q+ L SAT
Sbjct: 229 DHLHNTKAFIYKHLKCLVIDEADRILEDNFEEDMNKILKILPKTR---QTALFSAT---Q 282
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI-----LDQGY 211
T K + + H+ +D+ R L+QGY
Sbjct: 283 TSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGY 318
>gi|365764677|gb|EHN06199.1| Dbp7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 742
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 323/643 (50%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVSSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRI-ARMAEKQIASEFN 741
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|190409846|gb|EDV13111.1| ATP-dependent RNA helicase DBP7 [Saccharomyces cerevisiae RM11-1a]
gi|256272632|gb|EEU07610.1| Dbp7p [Saccharomyces cerevisiae JAY291]
gi|259147854|emb|CAY81104.1| Dbp7p [Saccharomyces cerevisiae EC1118]
Length = 742
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 323/643 (50%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVTSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRI-ARMAEKQIASEFN 741
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|384491674|gb|EIE82870.1| ATP-dependent RNA helicase HAS1 [Rhizopus delemar RA 99-880]
Length = 765
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 281/496 (56%), Gaps = 52/496 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
KN + + ++T VQ +I P++ G DVL ++TGSGKTLA+ IP ++ L R K
Sbjct: 318 KNAIKDLAFEKMTEVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAVEML--YRLKFKP 375
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G A+I+ PTRELALQ + +L K + + + GG K+E ++ KG++++VA
Sbjct: 376 RNGTGAIIVSPTRELALQIFGVAKELLK-YHQMTFGIVIGGANRKAEADKLVKGVNLIVA 434
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T + ++ L++DEADRIL+ G+E ++ + ++IL ++ Q++L S
Sbjct: 435 TPGRLLDHLQNTRGFVYKNLKALIIDEADRILEIGFEEEMRQIIKILPSER---QTMLFS 491
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T VQ LA ++L+ P+ I+ ++ D D L+Q ++V R + L
Sbjct: 492 ATQTTKVQDLARISLKKGPLYINVHENRDTSTA-------DGLEQGYVVCDSDRRFLLLF 544
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ + YH ELL+ + ++ LHG Q +RT
Sbjct: 545 TFL-------RKNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLALHGKQKQQKRTNT 594
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F + + + G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G +G SLL
Sbjct: 595 FFEYCNAERGILLCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARAGGQGKSLL 654
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL+PSE+ + L++ ++ + E + N ++ ++G L +L D N
Sbjct: 655 FLLPSELGFLRYLKHAKVPLNEYQFP---SNKIA-NVQGQLEKLIDKNY----------- 699
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
L+ SA GY S+++ Y+S+S L+ IF+ + L AK+F P V
Sbjct: 700 --------YLNQSAKDGYRSYLQAYSSFS--LKKIFDINSLDLAKVAKAFGFSSPPKVNL 749
Query: 883 GI---GKPKNKEELKN 895
G K N+EE+ N
Sbjct: 750 GSIKQMKKTNEEEVTN 765
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 114/174 (65%), Gaps = 6/174 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T VQ +I P++ G DVL ++TGSGKTLA+ IP ++ L R K ++G A+I+
Sbjct: 328 KMTEVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAVEML--YRLKFKPRNGTGAIIVS 385
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELALQ + +L K + + + GG K+E ++ KG++++VATPGRLLDH +
Sbjct: 386 PTRELALQIFGVAKELLK-YHQMTFGIVIGGANRKAEADKLVKGVNLIVATPGRLLDHLQ 444
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+T + ++ L++DEADRIL+ G+E ++ + ++IL ++ Q++L SAT T
Sbjct: 445 NTRGFVYKNLKALIIDEADRILEIGFEEEMRQIIKILPSER---QTMLFSATQT 495
>gi|164662887|ref|XP_001732565.1| hypothetical protein MGL_0340 [Malassezia globosa CBS 7966]
gi|159106468|gb|EDP45351.1| hypothetical protein MGL_0340 [Malassezia globosa CBS 7966]
Length = 542
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 279/506 (55%), Gaps = 55/506 (10%)
Query: 388 APTSYEEFPGIHPFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
A S E+ P PF +L + M +T VQ+ I P+L G DVL +QTGS
Sbjct: 25 AEASSEKLPDRKPFTALDLTPATSKALDAMGFKTMTEVQERCIPPLLAGKDVLGAAQTGS 84
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLA+ IP I+ LQ + K ++G A++I PTRELALQ + +L + +
Sbjct: 85 GKTLAFLIPAIEMLQRL--KFKPRNGTGAIVISPTRELALQIFGVAKELMAHQSQTL-GI 141
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
+ GG K+E +++KG+++++ATPGRLLDH ++T+ F+ ++ L++DEADRIL+ G+E
Sbjct: 142 IMGGANRKAEADKLQKGVNLIIATPGRLLDHLQNTKGFVFTNLKTLIIDEADRILEIGFE 201
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSL 619
++ + ++IL ++ Q++L SAT T VQ LA ++L+ P+ I+ +H +
Sbjct: 202 DEMRQIVKILPQE--HRQTMLFSATQTTKVQDLARISLRPGPLYIN------VHEQMAAS 253
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 679
+ L+Q ++V R + L +F+ + K++VFM + + +H ELL+
Sbjct: 254 TV-SKLEQGYVVCDSDKRFLLLFTFL-------KRNAGKKIIVFMNSCNSVKFHGELLNY 305
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPS 739
+ ++ LHG Q +R+ F F + +SG L+CTDVAARGLD+P VDWI+QY P
Sbjct: 306 I---DVPVLDLHGKQKQQKRSNTFFEFCNAESGTLLCTDVAARGLDIPAVDWIIQYDPPD 362
Query: 740 SSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKM 799
DY+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E
Sbjct: 363 DPRDYIHRVGRTARGGKHGRSLLFLLPSELGFLRFLKVAKVPLNEYTFPP---------- 412
Query: 800 EGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
+++A+ +Q E + + LH SA +GY S+++ Y SYS L+ I++
Sbjct: 413 ----NKIAN---------VQNQLEKLISKNYYLHQSAKEGYRSYIQAYGSYS--LKRIYD 457
Query: 860 FKQIHLGHFAKSFALRDAPSVISGIG 885
Q+ L AK+F P V IG
Sbjct: 458 IHQLDLAKVAKAFGFAVPPKVNVTIG 483
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 117/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ+ I P+L G DVL +QTGSGKTLA+ IP I+ LQ + K ++G A
Sbjct: 54 MGFKTMTEVQERCIPPLLAGKDVLGAAQTGSGKTLAFLIPAIEMLQRL--KFKPRNGTGA 111
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + + + GG K+E +++KG+++++ATPGRLL
Sbjct: 112 IVISPTRELALQIFGVAKELMAHQSQTL-GIIMGGANRKAEADKLQKGVNLIIATPGRLL 170
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F+ ++ L++DEADRIL+ G+E ++ + ++IL ++ Q++L SAT T
Sbjct: 171 DHLQNTKGFVFTNLKTLIIDEADRILEIGFEDEMRQIVKILPQE--HRQTMLFSATQT 226
>gi|349579586|dbj|GAA24748.1| K7_Dbp7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 742
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 321/643 (49%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVSSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFL----------EILKKQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E + E K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKTVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRM-ARMAEKQIASEFN 741
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++ + I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKTV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|346974113|gb|EGY17565.1| ATP-dependent RNA helicase HAS1 [Verticillium dahliae VdLs.17]
Length = 587
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 296/541 (54%), Gaps = 62/541 (11%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVL 433
P EAL P S EE F + NL+E GM T++T +Q+ I P+L G DVL
Sbjct: 95 PNREALTLPPSGEE---AQDFSQLNLSEKTMKAIEGMGFTKMTEIQRRGIPPLLTGRDVL 151
Query: 434 VRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSF 493
++TGSGKTLA+ IP I+ L +R K ++G +++ PTRELALQ + +L +
Sbjct: 152 GAAKTGSGKTLAFLIPAIEMLSSLRFKP--RNGTGVIVVSPTRELALQIFGVARELMEHH 209
Query: 494 TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADR 553
+ + GG ++E ++ KG+++++ATPGRLLDH ++T + F ++ L++DEADR
Sbjct: 210 SQTY-GIVIGGANRRAEAEKLAKGVNLIIATPGRLLDHLQNTPFV-FKNLKTLIIDEADR 267
Query: 554 ILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDI 612
IL+ G+E ++ + ++IL Q+ L SAT T V+ LA ++L+ P+ I+ D T
Sbjct: 268 ILEIGFEDEMRQIVKILPS--ADRQTSLFSATQTTKVEDLARISLRAGPLYINV-DQTKE 324
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 672
H+T + L +Q +++ R + L SF+ + + K++VF ++ + Y
Sbjct: 325 HSTVEGL------EQGYVICDEDKRFLLLFSFL-------KRNLKKKVIVFFSSCNSVKY 371
Query: 673 HTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
H ELL+ + ++ LHG M Q RT F F + K G LICTDVAARGLD+P VDW
Sbjct: 372 HAELLNYI---DLPVLSLHGKMKQQARTNTFFEFCNAKQGTLICTDVAARGLDIPSVDWS 428
Query: 733 VQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQ 792
V + P + TDY+HRVGRTAR +G SLLFL PSEV + L+ R+ +
Sbjct: 429 VSFDPPDAPTDYIHRVGRTARANAKGKSLLFLHPSEVGFLSHLKAARVPV---------- 478
Query: 793 NLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSK 852
V+ E S++A+ +Q E + Q L+ SA GY S++ YAS+S
Sbjct: 479 ----VEFEFPASKVAN---------IQALLEKLISQNYYLNKSAKDGYRSYLHAYASHS- 524
Query: 853 DLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKS---FKQR 909
LR +++ ++ L AKSF P V +G ++++ ++ ++ + F+Q+
Sbjct: 525 -LRSVYDINKLDLAKLAKSFGFAVPPRVDVTVGASGRDKKVQGRRTYGSQPRQNDRFRQK 583
Query: 910 G 910
G
Sbjct: 584 G 584
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 128 MGFTKMTEIQRRGIPPLLTGRDVLGAAKTGSGKTLAFLIPAIEMLSSLRFKP--RNGTGV 185
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++++ATPGRLL
Sbjct: 186 IVVSPTRELALQIFGVARELMEHHSQTY-GIVIGGANRRAEAEKLAKGVNLIIATPGRLL 244
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL Q+ L SAT T
Sbjct: 245 DHLQNTPFV-FKNLKTLIIDEADRILEIGFEDEMRQIVKILP--SADRQTSLFSATQT 299
>gi|302416461|ref|XP_003006062.1| ATP-dependent RNA helicase HAS1 [Verticillium albo-atrum VaMs.102]
gi|261355478|gb|EEY17906.1| ATP-dependent RNA helicase HAS1 [Verticillium albo-atrum VaMs.102]
Length = 587
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 296/541 (54%), Gaps = 62/541 (11%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVL 433
P EAL P S EE F + NL+E GM T++T +Q+ I P+L G DVL
Sbjct: 95 PNREALTLPPSGEE---AQDFSQLNLSEKTMKAIEGMGFTKMTEIQRRGIPPLLTGRDVL 151
Query: 434 VRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSF 493
++TGSGKTLA+ IP I+ L +R K ++G +++ PTRELALQ + +L +
Sbjct: 152 GAAKTGSGKTLAFLIPAIEMLSSLRFKP--RNGTGVIVVSPTRELALQIFGVARELMEHH 209
Query: 494 TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADR 553
+ + GG ++E ++ KG+++++ATPGRLLDH ++T + F ++ L++DEADR
Sbjct: 210 SQTY-GIVIGGANRRAEAEKLAKGVNLIIATPGRLLDHLQNTPFV-FKNLKTLIIDEADR 267
Query: 554 ILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDI 612
IL+ G+E ++ + ++IL Q+ L SAT T V+ LA ++L+ P+ I+ D T
Sbjct: 268 ILEIGFEDEMRQIVKILPS--ADRQTSLFSATQTTKVEDLARISLRAGPLYINV-DQTKE 324
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 672
H+T + L +Q +++ R + L SF+ + + K++VF ++ + Y
Sbjct: 325 HSTVEGL------EQGYVICDEDKRFLLLFSFL-------KRNLKKKVIVFFSSCNSVKY 371
Query: 673 HTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
H ELL+ + ++ LHG M Q RT F F + K G LICTDVAARGLD+P VDW
Sbjct: 372 HAELLNYI---DLPVLSLHGKMKQQARTNTFFEFCNAKQGTLICTDVAARGLDIPSVDWS 428
Query: 733 VQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQ 792
V + P + TDY+HRVGRTAR +G SLLFL PSEV + L+ R+ +
Sbjct: 429 VSFDPPDAPTDYIHRVGRTARANAKGKSLLFLHPSEVGFLSHLKAARVPV---------- 478
Query: 793 NLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSK 852
V+ E S++A+ +Q E + Q L+ SA GY S++ YAS+S
Sbjct: 479 ----VEFEFPASKVAN---------IQALLEKLISQNYYLNKSAKDGYRSYLHAYASHS- 524
Query: 853 DLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKS---FKQR 909
LR +++ ++ L AKSF P V +G ++++ ++ ++ + F+Q+
Sbjct: 525 -LRSVYDINKLDLAKLAKSFGFAVPPRVDVTVGASGRDKKVQGRRTYGSQPRQNDRFRQK 583
Query: 910 G 910
G
Sbjct: 584 G 584
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 128 MGFTKMTEIQRRGIPPLLTGRDVLGAAKTGSGKTLAFLIPAIEMLSSLRFKP--RNGTGV 185
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++++ATPGRLL
Sbjct: 186 IVVSPTRELALQIFGVARELMEHHSQTY-GIVIGGANRRAEAEKLAKGVNLIIATPGRLL 244
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL Q+ L SAT T
Sbjct: 245 DHLQNTPFV-FKNLKTLIIDEADRILEIGFEDEMRQIVKILP--SADRQTSLFSATQT 299
>gi|449550754|gb|EMD41718.1| hypothetical protein CERSUDRAFT_79353 [Ceriporiopsis subvermispora
B]
Length = 561
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 271/500 (54%), Gaps = 55/500 (11%)
Query: 389 PTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVLVRSQTGSG 441
P E PG F + L+E M T +T +Q+ SI +L G DVL ++TGSG
Sbjct: 11 PVPQESVPGRKSFSELELSEPTMRALQEMGFTTMTPIQEKSIPALLTGRDVLGAARTGSG 70
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
KTLA+ IP I+ L M K ++G +I+ PTRELALQ + +L + +
Sbjct: 71 KTLAFLIPAIELLHRM--KFKPRNGTGIIIVSPTRELALQIFGVAKELMAHHSQTF-GIV 127
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
GG ++E +++KG++++VATPGRLLDH + T+ F ++ LV+DEADRIL+ G+E
Sbjct: 128 MGGANRRAEAEKLQKGVNLIVATPGRLLDHLQDTKGFVFRNLKALVIDEADRILEVGFEE 187
Query: 562 DIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLV 620
++ + IL + Q S+L SAT T V LA ++L+ P+ ID D T+ +T +L
Sbjct: 188 EMKRIINILPTENRQ--SMLFSATQTTKVTDLARISLRPGPLYIDV-DKTENTSTVATL- 243
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
Q ++V P R + L +F+ + + K++VF ++ + YH ELL+ +
Sbjct: 244 -----SQGYVVCPSDRRFLLLFTFL-------KKHMKKKIVVFFSSCNSVKYHAELLNYI 291
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
++ LHG Q +RT F F + +SG L+CTDVAARGLD+P VDWI+QY P
Sbjct: 292 ---DVPVLDLHGKQKQQKRTTTFFEFCNAESGTLLCTDVAARGLDIPRVDWIIQYDPPDD 348
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKME 800
DY+HRVGRTAR G G SL+FL+PSE+ + L++ ++ + E
Sbjct: 349 PRDYIHRVGRTARAGKVGKSLMFLLPSELGFLRFLKDAKVPLNEFSFP------------ 396
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
+ ++A+ +Q E + + LH SA GY S+++ YASYS L+ IF+
Sbjct: 397 --VDKIAN---------VQSQLEKLLQKNYFLHQSARDGYRSYLQAYASYS--LKKIFDV 443
Query: 861 KQIHLGHFAKSFALRDAPSV 880
Q+ L KSF P V
Sbjct: 444 NQLDLAKVGKSFGFAVPPRV 463
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 110/178 (61%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q+ SI +L G DVL ++TGSGKTLA+ IP I+ L M K ++G
Sbjct: 39 MGFTTMTPIQEKSIPALLTGRDVLGAARTGSGKTLAFLIPAIELLHRM--KFKPRNGTGI 96
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + + GG ++E +++KG++++VATPGRLL
Sbjct: 97 IIVSPTRELALQIFGVAKELMAHHSQTF-GIVMGGANRRAEAEKLQKGVNLIVATPGRLL 155
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T+ F ++ LV+DEADRIL+ G+E ++ + IL + QS+L SAT T
Sbjct: 156 DHLQDTKGFVFRNLKALVIDEADRILEVGFEEEMKRIINILPTENR--QSMLFSATQT 211
>gi|330844673|ref|XP_003294242.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
gi|325075337|gb|EGC29238.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
Length = 599
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 291/521 (55%), Gaps = 57/521 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
IH KK++ E M ++T +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ L +
Sbjct: 126 IHDNTKKSIEE-MTFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEIL--V 182
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
+ ++G +II PTRELALQ + +L K T + GG K E+ R+ KG
Sbjct: 183 KSGFKPRNGTGVIIISPTRELALQIYGVAKELLKYHTQ-THGIIIGGAAKKPEEERLEKG 241
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
+++LVATPGRLLDH ++T+ ++ LV+DEADRIL+ G+E ++ + +++L K +
Sbjct: 242 VNLLVATPGRLLDHLQNTKGFITKNLKCLVIDEADRILEVGFEEEMHKIVKLLPKNR--- 298
Query: 578 QSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T V+ +A ++L N P+ + D +I + L+Q ++V P +
Sbjct: 299 QTMLFSATQTRKVEDIAKVSLNNSPVYVGVDDEREISTV-------EGLEQGYVVCPSER 351
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
R + L +F+ +N+N+ K++VF+++ + Y ELL+ + +I +LHG Q
Sbjct: 352 RFLLLYTFL---KRNLNK----KVIVFLSSCNAVKYTAELLNYI---DIPVLELHGRQKQ 401
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VG 755
+RT F F + + G+LICTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR VG
Sbjct: 402 QKRTNTFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVG 461
Query: 756 HEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LLFL+P E+ ++ L+ ++ + E + S++A+
Sbjct: 462 KKGRALLFLLPKELGFLKYLKLAKVPLNEYEFPK--------------SKIAN------- 500
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q E V Q L+ SA Y +++ YAS+S + IF+ + L AK+F
Sbjct: 501 --VQDQLEKVVSQNFYLYNSARDAYKAYICAYASHSH--KEIFDVNALDLQMVAKAFGFN 556
Query: 876 DAPSV-ISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKK 915
D P V +S KN + N+ N KQ G F KK
Sbjct: 557 DPPKVNLSVNSSGKNDRKTNNRSGFAN-----KQNGRFPKK 592
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ L ++ ++G
Sbjct: 137 MTFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEIL--VKSGFKPRNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L K T + GG K E+ R+ KG+++LVATPGRLL
Sbjct: 195 IIISPTRELALQIYGVAKELLKYHTQ-THGIIIGGAAKKPEEERLEKGVNLLVATPGRLL 253
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ ++ LV+DEADRIL+ G+E ++ + +++L K + Q++L SAT T
Sbjct: 254 DHLQNTKGFITKNLKCLVIDEADRILEVGFEEEMHKIVKLLPKNR---QTMLFSATQT 308
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 79/134 (58%), Gaps = 18/134 (13%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN-PIQI 256
LV+DEADRIL+ G+E ++ + +++L K + Q++L SAT T V+ +A ++L N P+ +
Sbjct: 270 LVIDEADRILEVGFEEEMHKIVKLLPKNR---QTMLFSATQTRKVEDIAKVSLNNSPVYV 326
Query: 257 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 316
D +I + L+Q ++V P + R + L +F+ +N+N+ K++VF+
Sbjct: 327 GVDDEREISTV-------EGLEQGYVVCPSERRFLLLYTFL---KRNLNK----KVIVFL 372
Query: 317 ATQDMADYHTELLS 330
++ + Y ELL+
Sbjct: 373 SSCNAVKYTAELLN 386
>gi|392576363|gb|EIW69494.1| hypothetical protein TREMEDRAFT_71647 [Tremella mesenterica DSM
1558]
Length = 562
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 175/484 (36%), Positives = 273/484 (56%), Gaps = 48/484 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T VQ +I P+L G DVL ++TGSGKT+A+ +P ++ L +R K G+
Sbjct: 99 ERMGFTTMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVELLSTLRFKPVNGTGV 158
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTRELALQ + +L + + L GG K+E +++KG++++VATPGR
Sbjct: 159 --IIISPTRELALQIFGVAKELMQDHSQTF-GVLMGGANRKTEADKLQKGVNLIVATPGR 215
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 216 LLDHLQNTKGFIFKNLKALVIDEADRILEIGFEEEMKQIIKILPNE--NRQSMLFSATQT 273
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V LA ++L+ P+ I+ DS+ +T D L +Q ++V R + L +F+
Sbjct: 274 TKVTDLARISLRPGPLYINV-DSSKSASTVDML------EQGYVVCESDKRFMLLFTFL- 325
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ + K++VF ++ + +YH ELL+ + ++ LHG Q +RT F F
Sbjct: 326 ------RRNLKKKIIVFFSSCNSVNYHAELLNYI---DVPVLDLHGKQKQQKRTNTFFEF 376
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
+ SG+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G G SLLFL+P
Sbjct: 377 CNAPSGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGKSLLFLLP 436
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
SE+ + L+ ++ + E + +++D +Q ES +
Sbjct: 437 SELGFLRFLKVAKVPLNEYQFPQ--------------KKISD---------VQKQLESLI 473
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
+ L+ SA GY ++++ YASYS L+ IF+ + L AK+F P V +G
Sbjct: 474 SKNHYLNQSARDGYRAYLQSYASYS--LKKIFDVNALDLAKVAKAFGFAVPPKVNISVGS 531
Query: 887 PKNK 890
K+K
Sbjct: 532 VKSK 535
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I P+L G DVL ++TGSGKT+A+ +P ++ L +R K G+
Sbjct: 101 MGFTTMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVELLSTLRFKPVNGTGV-- 158
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + L GG K+E +++KG++++VATPGRLL
Sbjct: 159 IIISPTRELALQIFGVAKELMQDHSQTF-GVLMGGANRKTEADKLQKGVNLIVATPGRLL 217
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 218 DHLQNTKGFIFKNLKALVIDEADRILEIGFEEEMKQIIKILPNE--NRQSMLFSATQT 273
>gi|388580865|gb|EIM21177.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 581
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/480 (35%), Positives = 269/480 (56%), Gaps = 50/480 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +Q+T VQ +I P++ G DVL + TGSGKTLA+ IP I+ L + K ++G
Sbjct: 72 EEMGFSQMTEVQAKTIPPLMAGRDVLGAAHTGSGKTLAFLIPAIEMLSRLHFKP--RNGT 129
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A++I PTRELALQ + + K+ + GG K+E +++KG+++++ATPGR
Sbjct: 130 GAIVISPTRELALQIFGVAKDIMKNHNQTF-GIIMGGANRKAEADKLQKGVNLIIATPGR 188
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ FS ++ L++DEADRIL+ G+E ++ + ++IL + Q ++L SAT T
Sbjct: 189 LLDHLQNTKGFVFSNMKSLIIDEADRILEIGFEEEMRQIVKILPTENRQ--TMLFSATQT 246
Query: 588 PAVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V LA ++L Q P+ I+ +H S + L+Q ++V +R + L +F+
Sbjct: 247 TKVTDLARVSLRQGPLYIN------VHEER-SAATNEQLEQGYVVCESDMRFLLLFTFL- 298
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ + YH ELL+ + +I LHG Q +RT F F
Sbjct: 299 ------KKNLKKKVIVFFSSCNSVKYHGELLNYI---DIPVLDLHGKQKQQKRTNTFFEF 349
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
+ +G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G G SLLFL+P
Sbjct: 350 CNAPNGILLCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARAGKAGKSLLFLLP 409
Query: 767 SEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
+E+ + L+ ++ + E K+ + N +Q E
Sbjct: 410 TELGFLRFLKTAKVPLNEYNFPKEKIAN------------------------VQTQLEKL 445
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + LH SA GY S+++ YASYS L+ IF+ ++ L AK+F P V +G
Sbjct: 446 INKNYYLHQSAKDGYRSYLQSYASYS--LKKIFDVNRLDLKKVAKAFGFSVPPKVNISLG 503
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +Q+T VQ +I P++ G DVL + TGSGKTLA+ IP I+ L + K ++G A
Sbjct: 74 MGFSQMTEVQAKTIPPLMAGRDVLGAAHTGSGKTLAFLIPAIEMLSRLHFKP--RNGTGA 131
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + + K+ + GG K+E +++KG+++++ATPGRLL
Sbjct: 132 IVISPTRELALQIFGVAKDIMKNHNQTF-GIIMGGANRKAEADKLQKGVNLIIATPGRLL 190
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ FS ++ L++DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 191 DHLQNTKGFVFSNMKSLIIDEADRILEIGFEEEMRQIVKILPTENR--QTMLFSATQT 246
>gi|323304142|gb|EGA57920.1| Dbp7p [Saccharomyces cerevisiae FostersB]
Length = 742
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 320/643 (49%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVXSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFL----------EILKKQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E + E K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKXVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH KSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLXKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRM-ARMAEKQIASEFN 741
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++ + I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKXV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|331217930|ref|XP_003321643.1| hypothetical protein PGTG_03180 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300633|gb|EFP77224.1| hypothetical protein PGTG_03180 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 646
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/493 (35%), Positives = 277/493 (56%), Gaps = 52/493 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+ M T++T VQ +I P++ G DVL ++TGSGKTLA+ IP ++ L ++ K ++G
Sbjct: 124 QDMGFTKMTEVQARTIPPLMTGRDVLGAARTGSGKTLAFLIPAVEMLSRLQFKP--RNGT 181
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELALQ + +L K + + + GG K+E ++ KG+++L++TPGR
Sbjct: 182 GTIIVSPTRELALQIFGVAQELMKHHSQTF-AIVIGGANRKAEAEKLVKGVNLLISTPGR 240
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ FS ++ LV+DEADRIL+ G+E ++ + + +L + QS+L SAT T
Sbjct: 241 LLDHLQNTKGFVFSNLKALVVDEADRILEIGFEDEMRQIISLLPSE--NRQSMLFSATQT 298
Query: 588 PAVQRLAGMTLQ-NPIQIDA-ADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
VQ LA ++L+ P+ I+ AD + L+Q ++V R + L +F+
Sbjct: 299 TKVQDLARISLRPGPLYINVDADKQE--------ATVQGLEQGYVVCDSDKRFLLLFTFL 350
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKT 705
+ + K++VF ++ + YH ELL+ + +I LHG Q +RT F
Sbjct: 351 -------KKSLKKKVIVFFSSCNSVKYHAELLNYI---DIPVLDLHGKQKQQKRTNTFFE 400
Query: 706 FRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLI 765
F + +G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G G SLLFL+
Sbjct: 401 FCNATTGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGRSLLFLL 460
Query: 766 PSEVKLVEELQNRRIRIEEIKLK-DCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
PSE+ + L+ ++ + E D L N+ +G L++L N
Sbjct: 461 PSELGFLRFLKMAKVPLNEYSFPMDKLANV-----QGQLTKLISKNY------------- 502
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI 884
LH SA G+ S+++ YASYS L+ IF+ ++ L ++F P+V +
Sbjct: 503 ------YLHQSARDGFRSYIQSYASYS--LKKIFDVNKLDLNKVGQAFGFSVPPAVNIPM 554
Query: 885 GKPKNKEELKNKK 897
G KN E K+K+
Sbjct: 555 GSLKNTENKKHKR 567
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P++ G DVL ++TGSGKTLA+ IP ++ L ++ K ++G
Sbjct: 126 MGFTKMTEVQARTIPPLMTGRDVLGAARTGSGKTLAFLIPAVEMLSRLQFKP--RNGTGT 183
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L K + + + GG K+E ++ KG+++L++TPGRLL
Sbjct: 184 IIVSPTRELALQIFGVAQELMKHHSQTF-AIVIGGANRKAEAEKLVKGVNLLISTPGRLL 242
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ FS ++ LV+DEADRIL+ G+E ++ + + +L + QS+L SAT T
Sbjct: 243 DHLQNTKGFVFSNLKALVVDEADRILEIGFEDEMRQIISLLPSE--NRQSMLFSATQT 298
>gi|410516909|sp|Q4IEK8.2|HAS1_GIBZE RecName: Full=ATP-dependent RNA helicase HAS1
Length = 591
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 299/551 (54%), Gaps = 54/551 (9%)
Query: 366 QNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQP 425
+NN D+PN L PV+ A S+EE MK +NE M T++T +Q+ I P
Sbjct: 93 ENNTDLPNGGQLTLPPVAGA--EAQSFEELKLSEKTMKA-INE-MKFTKMTEIQRRGIPP 148
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G +++ PTRELALQ +
Sbjct: 149 SLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGVIVVSPTRELALQIFGV 206
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T + F ++
Sbjct: 207 ARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTPFV-FKNLKS 264
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQI 604
LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT T V+ LA ++L+ P+ I
Sbjct: 265 LVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTKVEDLARISLRPGPLYI 322
Query: 605 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
+ D ++T + L +Q +I+ +R + L SF+ + + K++VF
Sbjct: 323 NV-DEEKQYSTVEGL------EQGYIICETDMRFLLLFSFL-------KRNLKKKIIVFF 368
Query: 665 ATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
++ YH ELL+ + ++ LHG Q +RT F F + K G LICTDVAARGL
Sbjct: 369 SSCACVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 425
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIE 783
D+P VDWI+Q+ P DY+HRVGRTAR ++G SL+FL P+E+ + L+ R+ +
Sbjct: 426 DIPSVDWIIQFDPPDDPRDYIHRVGRTARGSNNKGRSLMFLQPNELGFLSHLKAARVPVA 485
Query: 784 EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSW 843
E N + K+ +Q E + Q L+ SA GY S+
Sbjct: 486 EF-------NFPTKKI----------------INVQSQLEKLISQNYYLNKSAKDGYRSY 522
Query: 844 VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKE 903
+ YAS+S LR +F+ ++ L AKSF P V +G ++++ + + A +
Sbjct: 523 MHAYASHS--LRSVFDINKLDLAKVAKSFGFTQPPRVDITLGASMSRDKKQQGRRAYGSQ 580
Query: 904 KSFKQRGNFSK 914
Q F++
Sbjct: 581 PRQNQGNKFTR 591
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G
Sbjct: 133 MKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGV 190
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 191 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 249
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT
Sbjct: 250 DHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTK 306
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E ++S VE L+QGY
Sbjct: 307 VEDLARISLRPGPLYINVDEEKQYSTVEG---------LEQGY 340
>gi|408388016|gb|EKJ67711.1| hypothetical protein FPSE_12082 [Fusarium pseudograminearum CS3096]
Length = 591
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 299/551 (54%), Gaps = 54/551 (9%)
Query: 366 QNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQP 425
+NN D+PN L PV+ A S+EE MK +NE M T++T +Q+ I P
Sbjct: 93 ENNTDLPNGGQLTLPPVAGA--EAQSFEELKLSEKTMKA-INE-MKFTKMTEIQRRGIPP 148
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G +++ PTRELALQ +
Sbjct: 149 SLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGVIVVSPTRELALQIFGV 206
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T + F ++
Sbjct: 207 ARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTPFV-FKNLKS 264
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQI 604
LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT T V+ LA ++L+ P+ I
Sbjct: 265 LVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTKVEDLARISLRPGPLYI 322
Query: 605 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
+ D ++T + L +Q +I+ +R + L SF+ + + K++VF
Sbjct: 323 NV-DEEKQYSTVEGL------EQGYIICETDMRFLLLFSFL-------KRNLKKKIIVFF 368
Query: 665 ATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
++ YH ELL+ + ++ LHG Q +RT F F + K G LICTDVAARGL
Sbjct: 369 SSCACVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 425
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIE 783
D+P VDWI+Q+ P DY+HRVGRTAR ++G SL+FL P+E+ + L+ R+ +
Sbjct: 426 DIPSVDWIIQFDPPDDPRDYIHRVGRTARGSNNKGRSLMFLQPNELGFLSHLKAARVPVA 485
Query: 784 EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSW 843
E N + K+ +Q E + Q L+ SA GY S+
Sbjct: 486 EF-------NFPTKKI----------------INVQSQLEKLISQNYYLNKSAKDGYRSY 522
Query: 844 VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKE 903
+ YAS+S LR +F+ ++ L AKSF P V +G ++++ + + A +
Sbjct: 523 MHAYASHS--LRSVFDINKLDLAKVAKSFGFTQPPRVDITLGASMSRDKKQQGRRAYGSQ 580
Query: 904 KSFKQRGNFSK 914
Q F++
Sbjct: 581 PRQNQGNKFTR 591
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G
Sbjct: 133 MKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGV 190
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 191 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 249
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT
Sbjct: 250 DHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTK 306
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E ++S VE L+QGY
Sbjct: 307 VEDLARISLRPGPLYINVDEEKQYSTVEG---------LEQGY 340
>gi|378732005|gb|EHY58464.1| ATP-dependent RNA helicase HAS1 [Exophiala dermatitidis NIH/UT8656]
Length = 631
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 185/520 (35%), Positives = 291/520 (55%), Gaps = 58/520 (11%)
Query: 370 DIP--NVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPIL 427
D+P NVP+ P ++A P + E G+ K LNE M +T +Q+ I P++
Sbjct: 133 DLPTENVPSL---PGTDA--TPQKFSEL-GLSEKTMKALNE-MKFETMTEIQRRGIPPLM 185
Query: 428 DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFT 487
G DVL ++TGSGKTLA+ IP ++ L +R K ++G +++ PTRELALQ +
Sbjct: 186 AGRDVLGAAKTGSGKTLAFLIPAVEMLHALRFKP--RNGTGVIVVSPTRELALQIFGVAR 243
Query: 488 KLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLV 547
L + F + GG +E ++ KG+++L+ATPGRLLDH ++T+ + V+ LV
Sbjct: 244 DLMQ-FHSQTFGIVIGGANRSAEADKLTKGVNLLIATPGRLLDHLQNTKGFIYKNVKALV 302
Query: 548 LDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDA 606
+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 303 IDEADRILEVGFEDEMRQIVKILPKE--DRQTMLFSATQTTKVEDLARISLRPGPLYINV 360
Query: 607 ADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMAT 666
D T H+T + L +Q +++ R + L SF+ + + K++VFM++
Sbjct: 361 -DHTKEHSTVEGL------EQGYVICDSDKRFLLLFSFL-------KRNLKKKVIVFMSS 406
Query: 667 QDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
+ YH ELL+ + ++ +LHG++ Q +RT F F + K+G+L+CTDVAARGLD+
Sbjct: 407 CNCVKYHAELLNYI---DLPVLELHGNLKQQKRTNTFFEFCNAKAGILVCTDVAARGLDI 463
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEI 785
P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL P+EV + L+ R+ + E
Sbjct: 464 PAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPNEVGFLSHLKEARVPVVEF 523
Query: 786 KLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR 845
+ LL++ Q E + Q L+ SA GY S+++
Sbjct: 524 DFP--AKKLLNI---------------------QSQLEKLISQNYYLNKSAKDGYRSYLQ 560
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
YAS+S LR +F+ ++ L AKSF P V +G
Sbjct: 561 AYASHS--LRSVFDVNKLDLVKVAKSFGFATPPRVDIQLG 598
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P++ G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 168 MKFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLAFLIPAVEMLHALRFKP--RNGTGV 225
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L + F + GG +E ++ KG+++L+ATPGRLL
Sbjct: 226 IVVSPTRELALQIFGVARDLMQ-FHSQTFGIVIGGANRSAEADKLTKGVNLLIATPGRLL 284
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 285 DHLQNTKGFIYKNVKALVIDEADRILEVGFEDEMRQIVKILPKE--DRQTMLFSATQT-- 340
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 341 ------------TKVEDLA-----RI------------------------------SLRP 353
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ D T H+T + L+Q +++ R + L SF+
Sbjct: 354 G-----------PLYIN-VDHTKEHSTV------EGLEQGYVICDSDKRFLLLFSFL--- 392
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ + K++VFM++ + YH ELL+
Sbjct: 393 ----KRNLKKKVIVFMSSCNCVKYHAELLN 418
>gi|310795196|gb|EFQ30657.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 759
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 307/595 (51%), Gaps = 73/595 (12%)
Query: 357 KSGPISS-LFQNNP------DIPNVPTRRLKPVSEALFAPTSYEEFP----GIHPFMKKN 405
+ GP++S LF NP D P K ++E AP S E GI +
Sbjct: 111 RDGPVTSKLFSYNPTPKTIFDEPGSEKVEEK-IAEPSNAPLSDEAASFHALGISRRLALT 169
Query: 406 LNEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
L+ + + T +Q I Q I + D V++QTGSGKTLAY +PIIQ++ + +I R
Sbjct: 170 LSGKIQLKAPTAIQAKVIPQLITEDNDAFVQAQTGSGKTLAYLLPIIQRILSVEGQIKRD 229
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
G++A+++ PTREL Q + K+ + +V + + GGE SEK+R+RKG++IL+AT
Sbjct: 230 SGLFAIVMAPTRELCRQIELVLAKVLPPY--LVSTTVIGGESKHSEKSRLRKGVNILIAT 287
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK---------- 574
PGRL DH +HT+TL V LVLDE DR+++ G+E ++ + +++
Sbjct: 288 PGRLSDHLQHTKTLDVGTVRWLVLDEGDRLMEMGFEAELRTIVSKIRENPLAKSTANGVS 347
Query: 575 ----PQFQ-SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHF 629
PQ + ++L SAT+ VQ+L ++L++ + I ++ + P LKQ++
Sbjct: 348 LANLPQRRVTVLCSATMKMNVQKLGEISLEDAVHITTSEEEQVDGEETKFEAPAQLKQNY 407
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL------------ 677
++ P KLRLV L + + K + K +VF++ D DYH +LL
Sbjct: 408 LIVPAKLRLVTLIALL--KSTFSRKGSVMKAIVFLSCADSVDYHFDLLRQPPAKDEKATE 465
Query: 678 ---------------STVLGENIAFFKLHGSMSQSERTEVFKTF-RSVKSGVLICTDVAA 721
++ NI KLHGS+ Q RT ++ + VLI TD+A+
Sbjct: 466 NPSQTANTVAPSAYITSAANTNIVLHKLHGSLPQPVRTATLASYSKCTDPTVLITTDIAS 525
Query: 722 RGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRI 780
RGLD+P V+ +V+Y S+ D+VHR+GRTAR G G ++LFL+P E ++ L+ +
Sbjct: 526 RGLDVPSVELVVEYDPAFSAADHVHRIGRTARAGRPGKAVLFLMPGCEEGYIDLLKAQNA 585
Query: 781 RIEEIKLKD-CLQNLLSVKMEGDLSRLA------DGNVETAATALQMSFESAVL--QQKI 831
+ +L D L L+ ME + A D T A LQ+ E +L
Sbjct: 586 SPPKPELYDTVLHKGLTTGMEFPVETDAKPQPATDRGFSTRAENLQLHLEQRLLLPSATK 645
Query: 832 LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
L A K + S +R YA++ K+ R F+ ++HLGH AK++ LR+AP SGIG+
Sbjct: 646 LLDEARKAFRSHIRAYATHIKEERVYFDINELHLGHMAKAYGLREAP---SGIGR 697
Score = 149 bits (376), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 153/322 (47%), Gaps = 64/322 (19%)
Query: 15 QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTL 74
Q I + D V++QTGSGKTLAY +PIIQ++ + +I R G++A+++ PTREL Q
Sbjct: 189 QLITEDNDAFVQAQTGSGKTLAYLLPIIQRILSVEGQIKRDSGLFAIVMAPTRELCRQIE 248
Query: 75 EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKV 134
+ K+ + +V + + GGE SEK+R+RKG++IL+ATPGRL DH +HT+TL V
Sbjct: 249 LVLAKVLPPY--LVSTTVIGGESKHSEKSRLRKGVNILIATPGRLSDHLQHTKTLDVGTV 306
Query: 135 EHLVLDEADRILDQGYERDIAEFLEILKK--QKPQFQSILLSATLTP-----ATCWCKHT 187
LVLDE DR+++ G+E AE I+ K + P +S +L T C T
Sbjct: 307 RWLVLDEGDRLMEMGFE---AELRTIVSKIRENPLAKSTANGVSLANLPQRRVTVLCSAT 363
Query: 188 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAG 247
+ K+ + L++A
Sbjct: 364 MKMNVQKLGEISLEDA-------------------------------------------- 379
Query: 248 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 307
+ I ++ + P LKQ++++ P KLRLV L + + K +
Sbjct: 380 ------VHITTSEEEQVDGEETKFEAPAQLKQNYLIVPAKLRLVTLIALL--KSTFSRKG 431
Query: 308 EESKMLVFMATQDMADYHTELL 329
K +VF++ D DYH +LL
Sbjct: 432 SVMKAIVFLSCADSVDYHFDLL 453
>gi|58263404|ref|XP_569112.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108568|ref|XP_777235.1| hypothetical protein CNBB4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818214|sp|P0CQ85.1|HAS1_CRYNB RecName: Full=ATP-dependent RNA helicase HAS1
gi|338818215|sp|P0CQ84.1|HAS1_CRYNJ RecName: Full=ATP-dependent RNA helicase HAS1
gi|50259920|gb|EAL22588.1| hypothetical protein CNBB4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223762|gb|AAW41805.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 607
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 279/510 (54%), Gaps = 59/510 (11%)
Query: 390 TSYEEFPGIHPFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
T YE P F NL+ E M +T VQ +I P+L G DVL ++TGSGK
Sbjct: 124 TDYERVP----FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGK 179
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
T+A+ IP ++ L +R K G+ +II PTRELALQ + +L + + L
Sbjct: 180 TMAFLIPSVELLSTLRFKPVNGTGV--IIISPTRELALQIFGVAKELMQGHSQTF-GVLM 236
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GG K+E ++ KG++++VATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E +
Sbjct: 237 GGANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEE 296
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVI 621
+ + +++L + QS+L SAT T V LA ++L+ P+ I+ D T +T D L
Sbjct: 297 MKQIIKLLPSE--NRQSMLFSATQTTKVTDLARISLRPGPLYINV-DETKEASTADML-- 351
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
+Q ++V R + L +F+ ++ + K++VF ++ + YH ELL+ +
Sbjct: 352 ----EQGYVVCESDQRFMLLFTFL-------KKNLKKKVIVFFSSCNSVKYHAELLNYI- 399
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
++ LHG Q +RT F F + +G+L+CTDVAARGLD+P VDWI+Q+ P
Sbjct: 400 --DVPVLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDP 457
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
DY+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E +
Sbjct: 458 RDYIHRVGRTARAGKSGKSLLFLLPSELGFLRFLKVAKVPLNEYQFPQ------------ 505
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
++AD +Q ES + + L+TSA GY S+++ YASYS L+ IF+
Sbjct: 506 --KKVAD---------VQKQLESLISKNHYLNTSARDGYRSYLQAYASYS--LKKIFDVN 552
Query: 862 QIHLGHFAKSFALRDAPSVISGIGKPKNKE 891
++ L K+F P V +G K K+
Sbjct: 553 KLDLAKVGKAFGFAVPPKVNISVGSVKAKK 582
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKT+A+ IP ++ L +R K G+
Sbjct: 147 MGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPVNGTGV-- 204
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + L GG K+E ++ KG++++VATPGRLL
Sbjct: 205 IIISPTRELALQIFGVAKELMQGHSQTF-GVLMGGANRKAEADKLVKGVNLIVATPGRLL 263
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 264 DHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSE--NRQSMLFSATQT 319
>gi|405118333|gb|AFR93107.1| ATP-dependent RNA helicase HAS1 [Cryptococcus neoformans var.
grubii H99]
Length = 544
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 178/500 (35%), Positives = 276/500 (55%), Gaps = 55/500 (11%)
Query: 400 PFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQ 452
PF NL+ E M +T VQ +I P+L G DVL ++TGSGKT+A+ +P ++
Sbjct: 67 PFSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVE 126
Query: 453 KLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKA 512
L +R K G+ +II PTRELALQ + +L + + L GG K+E
Sbjct: 127 LLSTLRFKPVNGTGV--IIISPTRELALQIFGVAKELMQDHSQTF-GVLMGGANRKAEAD 183
Query: 513 RIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK 572
++ KG++++VATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L
Sbjct: 184 KLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPS 243
Query: 573 QKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ QS+L SAT T V LA ++L+ P+ I+ D T +T D L +Q ++V
Sbjct: 244 E--NRQSMLFSATQTTKVTDLARISLRPGPLYINV-DETKEASTADML------EQGYVV 294
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
R + L +F+ ++ + K++VF ++ + YH ELL+ + ++ LH
Sbjct: 295 CESDQRFMLLFTFL-------KKNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLDLH 344
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q +RT F F + +G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRT
Sbjct: 345 GKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRT 404
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR G G SLLFL+PSE+ + L+ ++ + E + ++AD
Sbjct: 405 ARAGKSGKSLLFLLPSELGFLRFLKVAKVPLNEYQFPQ--------------KKVAD--- 447
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+Q ES + + L+TSA GY S+++ YASYS L+ IF+ ++ L K+
Sbjct: 448 ------VQKQLESLISKNHYLNTSARDGYRSYLQAYASYS--LKKIFDVNKLDLAKVGKA 499
Query: 872 FALRDAPSVISGIGKPKNKE 891
F P V +G K K+
Sbjct: 500 FGFAVPPKVNISVGSVKAKK 519
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKT+A+ +P ++ L +R K G+
Sbjct: 84 MGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVELLSTLRFKPVNGTGV-- 141
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + L GG K+E ++ KG++++VATPGRLL
Sbjct: 142 IIISPTRELALQIFGVAKELMQDHSQTF-GVLMGGANRKAEADKLVKGVNLIVATPGRLL 200
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 201 DHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSE--NRQSMLFSATQT 256
>gi|406864021|gb|EKD17067.1| ATP-dependent RNA helicase has1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 603
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 285/511 (55%), Gaps = 53/511 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
EGM +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 140 EGMKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLNALRFK--PRNGT 197
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELALQ + +L + + GG ++E ++ KG++++VATPGR
Sbjct: 198 GVIIVSPTRELALQIFGVARELMSHHSQTY-GIVIGGANRRAEAEKLAKGVNLIVATPGR 256
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T
Sbjct: 257 LLDHLQNTQGFVFKNLKALIIDEADRILEIGFEDEMRQIVKILPKG--DRQTMLFSATQT 314
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ ID D + H+T + L +Q ++V + R + L SF+
Sbjct: 315 TKVEDLARISLRAGPLYIDVDDKKE-HSTVEGL------EQGYVVCDEEKRFLLLFSFL- 366
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+N+N+ K++VF+++ Y+ ELL+ + + LHG Q +RT F F
Sbjct: 367 --KRNINK----KVIVFLSSCACVKYYAELLNFIA---LPVLDLHGKQKQQKRTNTFFEF 417
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLI 765
+ + G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL
Sbjct: 418 INAEKGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGSNGKGRSLMFLQ 477
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV + L+ R+ + E + +++V Q + E
Sbjct: 478 PSEVGFLAHLKTARVPVVEFDFP--AKKIINV---------------------QSALEKL 514
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ Q L+ SA GY S+++ Y+S+S LR IF+ ++ L AKSF P V +G
Sbjct: 515 ISQNYYLNKSAKDGYRSYLQAYSSHS--LRTIFDVHKLDLVKVAKSFGFTAPPRVDLTLG 572
Query: 886 KPKNKEELKNKKMAINKE----KSFKQRGNF 912
++++ + A + SFK+RG F
Sbjct: 573 ASMSRDKKTQGRRAYGSQPKQGGSFKKRGTF 603
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 142 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLNALRFK--PRNGTGV 199
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + + GG ++E ++ KG++++VATPGRLL
Sbjct: 200 IIVSPTRELALQIFGVARELMSHHSQTY-GIVIGGANRRAEAEKLAKGVNLIVATPGRLL 258
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T
Sbjct: 259 DHLQNTQGFVFKNLKALIIDEADRILEIGFEDEMRQIVKILPKG--DRQTMLFSATQT 314
>gi|401882105|gb|EJT46378.1| hypothetical protein A1Q1_05025 [Trichosporon asahii var. asahii
CBS 2479]
gi|406700847|gb|EKD04009.1| hypothetical protein A1Q2_01683 [Trichosporon asahii var. asahii
CBS 8904]
Length = 558
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 265/477 (55%), Gaps = 48/477 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T VQ +I P+L G DVL ++TGSGKT+A+ +P ++ L ++R K + G+
Sbjct: 86 MGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPAVEMLHQLRFKPANGTGV-- 143
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ L + L + + + GG K+E ++ KG+++LVATPGRLL
Sbjct: 144 IIISPTRELALQILGVVKDLMQGHSQTF-GIVMGGANRKAEADKLVKGVNLLVATPGRLL 202
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL QS+L SAT T
Sbjct: 203 DHLQNTKGFIFKNLKALVIDEADRILEVGFEDEMRQIIKILPDD--NRQSMLFSATQTTK 260
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V LA ++L+ P+ I+ + D L+Q ++V R + L +F+
Sbjct: 261 VTDLARISLRPGPLYINVDEKKDTSTAQ-------FLEQGYVVCDSDRRFLLLFTFL--- 310
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 311 ----KRNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLDLHGKQKQQKRTNTFFEFCN 363
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G G SLLFL+PSE
Sbjct: 364 APNGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGKSLLFLLPSE 423
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L+ ++ + E + ++AD +Q ES + +
Sbjct: 424 LGFLRFLKVAKVPLNEYQFPQ--------------KKIAD---------VQKQLESLISK 460
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
L+TSA G+ S+++ YASYS L+ IF+ ++ L AK+F P V +G
Sbjct: 461 NHYLNTSARDGFRSYLQAYASYS--LKKIFDVNKLDLAKVAKAFGFSVPPKVNISVG 515
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 22/224 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKT+A+ +P ++ L ++R K + G+
Sbjct: 86 MGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPAVEMLHQLRFKPANGTGV-- 143
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ L + L + + + GG K+E ++ KG+++LVATPGRLL
Sbjct: 144 IIISPTRELALQILGVVKDLMQGHSQTF-GIVMGGANRKAEADKLVKGVNLLVATPGRLL 202
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL QS+L SAT
Sbjct: 203 DHLQNTKGFIFKNLKALVIDEADRILEVGFEDEMRQIIKILPDD--NRQSMLFSATQTTK 260
Query: 177 --------LTPATCWC-----KHTETLKFSKVEHLVLDEADRIL 207
L P + K T T +F + ++V D R L
Sbjct: 261 VTDLARISLRPGPLYINVDEKKDTSTAQFLEQGYVVCDSDRRFL 304
>gi|357607975|gb|EHJ65769.1| hypothetical protein KGM_22300 [Danaus plexippus]
Length = 929
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 229/386 (59%), Gaps = 70/386 (18%)
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEIPKKTEVKSGP-I 361
N N D +S D+A +L K K K+Y + D+ ++ K ++KSGP I
Sbjct: 75 NTNSDSKS--------DDLAGRLRDLSENKGKFHG-KDYQLLSDDIKL--KQKLKSGPWI 123
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNP++P + + ++PV E +FA ++ + IHP NL + +N+T++ TVQQ
Sbjct: 124 SSLFKNNPEVPKIGQKAVRPVVEKVFAGKTFSDL-NIHPHSVANLKQNLNLTELMTVQQK 182
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I IL+G DVL+RSQTGSGKTLAYA+P+I+ LQ +RPKI+R DGI A++++PTRELA+Q
Sbjct: 183 AIPIILEGRDVLIRSQTGSGKTLAYALPVIEGLQAIRPKINRHDGIKAIVVVPTRELAVQ 242
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
T E+F KL K F WIVP L+GG+K K+EKAR+RKG+SILV TPGR+ DH +HT +L F+
Sbjct: 243 TYELFVKLVKPFVWIVPGLLSGGQKRKAEKARLRKGLSILVGTPGRINDHLRHTHSLNFA 302
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------------------------- 574
K L+LDEADR+LD GYE+D++ ++ ++ K
Sbjct: 303 KTGCLILDEADRLLDMGYEKDVSAIVKAIEDHKKAATYDPMALVKQTIVKKVSDNEEVEE 362
Query: 575 ----------------------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDI 612
+ Q+ILLSATLT AV+ LAG+T+Q+P+ ID +D
Sbjct: 363 QNETENVVETSVEHPLTKVFLSKERQTILLSATLTKAVENLAGITMQDPVFIDTSDG--- 419
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRL 638
V+ DSLK + P L
Sbjct: 420 -----KAVVADSLKPKPVQEEPNQNL 440
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 192/291 (65%), Gaps = 22/291 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N+T++ TVQQ +I IL+G DVL+RSQTGSGKTLAYA+P+I+ LQ +RPKI+R DGI A
Sbjct: 171 LNLTELMTVQQKAIPIILEGRDVLIRSQTGSGKTLAYALPVIEGLQAIRPKINRHDGIKA 230
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELA+QT E+F KL K F WIVP L+GG+K K+EKAR+RKG+SILV TPGR+
Sbjct: 231 IVVVPTRELAVQTYELFVKLVKPFVWIVPGLLSGGQKRKAEKARLRKGLSILVGTPGRIN 290
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +HT +L F+K L+LDEADR+LD GYE+D++ ++ ++ K +AT P
Sbjct: 291 DHLRHTHSLNFAKTGCLILDEADRLLDMGYEKDVSAIVKAIEDHKK-------AATYDP- 342
Query: 181 TCWCKHTETLKFS-KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
K T K S E +E + +++ E + + L K++ Q++LLSATLT
Sbjct: 343 MALVKQTIVKKVSDNEEVEEQNETENVVETSVEHPLTKVF--LSKER---QTILLSATLT 397
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 290
AV+ LAG+T+Q+P+ ID +D V+ DSLK + P L
Sbjct: 398 KAVENLAGITMQDPVFIDTSDG--------KAVVADSLKPKPVQEEPNQNL 440
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 200/367 (54%), Gaps = 67/367 (18%)
Query: 617 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 676
D LV+P ++ Q F++ P KLRLV L S I+ C V + KM+VFMAT +M DY +EL
Sbjct: 560 DELVLPATVNQTFLIVPMKLRLVTLCSLIVEHC--VLNKKGGKMIVFMATLEMVDYLSEL 617
Query: 677 LSTVL------------------GEN----------------------IAFFKLHGSMSQ 696
+ TVL G+N + F LHGSM
Sbjct: 618 IETVLTGKDNKKTDSKKKGSQNGGKNDEESDSSDFEINYSEPGLVPLDLDVFSLHGSMPH 677
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EVFK FR+ K GVLICTDVAARGLD+P VD ++Q+ AP+S+TDYVHRVGRT R
Sbjct: 678 ETRMEVFKQFRTAKHGVLICTDVAARGLDVPRVDLVLQFCAPASATDYVHRVGRTGRAAQ 737
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
G++ +FL+PSE + V L+ +RIR+ + L+ L +V ++ +++ AA
Sbjct: 738 VGAATMFLLPSEAEFVRHLEQKRIRLRQSDESKALEALRTVAP-------SEHSMQRAAI 790
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
A+Q E K A + +TSWVRFY+ Y +++R + +Q+HLGH AK+FALRD
Sbjct: 791 AVQAKLEHVAHSSKEWLARASRAFTSWVRFYSGYPREVRMWLDARQLHLGHAAKAFALRD 850
Query: 877 APSVISGIGKPKNKEELK-NKKMAINKEKSFKQRGNFSKKQM----------------LS 919
P+ ++ K + ++K N ++ ++ E+ K+R F K +M S
Sbjct: 851 TPAALARRAKADPRVKVKPNNRLTVHDEEE-KKRPGFEKLKMGAFGNKILNKQTSMHTAS 909
Query: 920 EFDSGLP 926
E+DSGLP
Sbjct: 910 EYDSGLP 916
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 269 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 328
D LV+P ++ Q F++ P KLRLV L S I+ C V + KM+VFMAT +M DY +EL
Sbjct: 560 DELVLPATVNQTFLIVPMKLRLVTLCSLIVEHC--VLNKKGGKMIVFMATLEMVDYLSEL 617
Query: 329 LST 331
+ T
Sbjct: 618 IET 620
>gi|46117016|ref|XP_384526.1| hypothetical protein FG04350.1 [Gibberella zeae PH-1]
Length = 590
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/536 (34%), Positives = 294/536 (54%), Gaps = 54/536 (10%)
Query: 366 QNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQP 425
+NN D+PN L PV+ A S+EE MK +NE M T++T +Q+ I P
Sbjct: 93 ENNTDLPNGGQLTLPPVAGA--EAQSFEELKLSEKTMKA-INE-MKFTKMTEIQRRGIPP 148
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G +++ PTRELALQ +
Sbjct: 149 SLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGVIVVSPTRELALQIFGV 206
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T + F ++
Sbjct: 207 ARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTPFV-FKNLKS 264
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQI 604
LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT T V+ LA ++L+ P+ I
Sbjct: 265 LVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTKVEDLARISLRPGPLYI 322
Query: 605 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
+ D ++T + L +Q +I+ +R + L SF+ + + K++VF
Sbjct: 323 NV-DEEKQYSTVEGL------EQGYIICETDMRFLLLFSFL-------KRNLKKKIIVFF 368
Query: 665 ATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
++ YH ELL+ + ++ LHG Q +RT F F + K G LICTDVAARGL
Sbjct: 369 SSCACVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 425
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIE 783
D+P VDWI+Q+ P DY+HRVGRTAR ++G SL+FL P+E+ + L+ R+ +
Sbjct: 426 DIPSVDWIIQFDPPDDPRDYIHRVGRTARGSNNKGRSLMFLQPNELGFLSHLKAARVPVA 485
Query: 784 EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSW 843
E N + K+ +Q E + Q L+ SA GY S+
Sbjct: 486 EF-------NFPTKKI----------------INVQSQLEKLISQNYYLNKSAKDGYRSY 522
Query: 844 VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMA 899
+ YAS+S LR +F+ ++ L AKSF P V +G ++++ + + A
Sbjct: 523 MHAYASHS--LRSVFDINKLDLAKVAKSFGFTQPPRVDITLGASMSRDKKQQGRRA 576
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G
Sbjct: 133 MKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGV 190
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 191 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 249
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT
Sbjct: 250 DHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTK 306
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E ++S VE L+QGY
Sbjct: 307 VEDLARISLRPGPLYINVDEEKQYSTVEG---------LEQGY 340
>gi|380493929|emb|CCF33525.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 759
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 306/595 (51%), Gaps = 73/595 (12%)
Query: 357 KSGPISS-LFQNNP------DIPNVPTRRLKPVSEALFAPTSYEEFP----GIHPFMKKN 405
+ GP++S LF NP D P K V+E AP S E GI +
Sbjct: 111 RDGPVTSKLFSYNPTPKTIFDEPGAEKVEEK-VAEPSNAPLSDEAASFHALGISRRLALT 169
Query: 406 LNEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
L+ + + T +Q I Q I + D V++QTGSGKTLAY +PIIQ++ + +I R
Sbjct: 170 LSGKIQLKAPTAIQAKVIPQLITEDSDAFVQAQTGSGKTLAYLLPIIQRILSVEGQIKRD 229
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
G++A+++ PTREL Q + K+ ++V + + GGE SEK+R+RKG++IL+AT
Sbjct: 230 SGLFAIVMAPTRELCRQIELVLAKVLPP--YLVSTTVIGGESKHSEKSRLRKGVNILIAT 287
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK---------- 574
PGRL DH +HT+TL V LVLDE DR+++ G+E ++ + +++
Sbjct: 288 PGRLSDHLQHTKTLDVGTVRWLVLDEGDRLMEMGFEAELRTIVSKIREGPLAKSTANGVS 347
Query: 575 ----PQFQ-SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHF 629
PQ + ++L SAT+ VQ+L ++L++ + I ++ + P LKQ++
Sbjct: 348 LANLPQRRVTVLCSATMKMNVQKLGEISLEDAVHITTSEEEQVDGEEIKFEAPAQLKQNY 407
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE------ 683
++ P KLRLV L + + K + K ++F++ D DYH +LL G+
Sbjct: 408 LIVPAKLRLVTLIALL--KSTFSRKGSVMKAIIFLSCADSVDYHFDLLRQPPGKDEKPTD 465
Query: 684 ---------------------NIAFFKLHGSMSQSERTEVFKTF-RSVKSGVLICTDVAA 721
NI +LHGS+ Q RT ++ + VLI TD+A+
Sbjct: 466 NPSPTANTVAPSAYITSAANTNIVLHRLHGSLPQPVRTATLASYSKFTDPTVLITTDIAS 525
Query: 722 RGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRI 780
RGLD+P V+ +V+Y S+ D+VHR+GRTAR G G ++LFL+P E ++ L+ +
Sbjct: 526 RGLDVPSVELVVEYDPAFSAADHVHRIGRTARAGRPGKAILFLMPGCEEGYIDLLKAKNA 585
Query: 781 RIEEIKLKD-CLQNLLSVKME------GDLSRLADGNVETAATALQMSFESAVL--QQKI 831
+ +L D L L+ ME AD T A LQ+ E +L
Sbjct: 586 SPPKPELYDTVLHKGLTTGMEFPVETDAKPQPAADRGFSTRAENLQLHLEQRLLLPSSTK 645
Query: 832 LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
L A K + S +R YA++ K+ R F+ ++HLGH AK++ LR+AP SGIG+
Sbjct: 646 LLDEARKAFRSHIRAYATHIKEERIYFDINELHLGHMAKAYGLREAP---SGIGR 697
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 68/332 (20%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q + QL I + D V++QTGSGKTLAY +PIIQ++ + +I R G++A+++
Sbjct: 183 QAKVIPQL----ITEDSDAFVQAQTGSGKTLAYLLPIIQRILSVEGQIKRDSGLFAIVMA 238
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTREL Q + K+ ++V + + GGE SEK+R+RKG++IL+ATPGRL DH +
Sbjct: 239 PTRELCRQIELVLAKVLPP--YLVSTTVIGGESKHSEKSRLRKGVNILIATPGRLSDHLQ 296
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK--QKPQFQSILLSATLTP--- 179
HT+TL V LVLDE DR+++ G+E AE I+ K + P +S +L
Sbjct: 297 HTKTLDVGTVRWLVLDEGDRLMEMGFE---AELRTIVSKIREGPLAKSTANGVSLANLPQ 353
Query: 180 --ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSAT 237
T C T + K+ + L++A
Sbjct: 354 RRVTVLCSATMKMNVQKLGEISLEDA---------------------------------- 379
Query: 238 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
+ I ++ + P LKQ++++ P KLRLV L + +
Sbjct: 380 ----------------VHITTSEEEQVDGEEIKFEAPAQLKQNYLIVPAKLRLVTLIALL 423
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
K + K ++F++ D DYH +LL
Sbjct: 424 --KSTFSRKGSVMKAIIFLSCADSVDYHFDLL 453
>gi|345567599|gb|EGX50528.1| hypothetical protein AOL_s00075g164 [Arthrobotrys oligospora ATCC
24927]
Length = 633
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 277/487 (56%), Gaps = 49/487 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 168 MGFTKMTEVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSSLRFK--PRNGTGV 225
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELALQ + +L K + + GG ++E ++ KGI++L+ATPGRLL
Sbjct: 226 VVVSPTRELALQIFHVARELTKHHSQTC-GIVIGGANRRAEAEKLSKGINLLIATPGRLL 284
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL KQ QS+L SAT T
Sbjct: 285 DHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPKQ--DRQSMLFSATQTTK 342
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 343 VEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICEADKRFLLLFSFL--- 392
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + Y+ ELL+ + ++ LHG+ Q +RT F F +
Sbjct: 393 ----KRNLKKKVIVFFSSCNSVKYYAELLNYI---DLPVLDLHGNQKQQKRTNTFFEFCN 445
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G LI T+VA+RGLD+P VDWIVQ+ P ST+Y+HRVGRTAR V +G SL+FL+P+
Sbjct: 446 AKQGTLIATNVASRGLDIPAVDWIVQFDPPDDSTEYIHRVGRTARGVDGKGRSLMFLLPT 505
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L+ +RI + V+ E S++ + +Q E +
Sbjct: 506 EVGFLKILKEKRIPV--------------VEFEFPASKIVN---------VQSQLEKLIG 542
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
Q L+ SA GY S++ YAS+S LR IF+ ++ L AKSF P V +G
Sbjct: 543 QNYYLNKSAKDGYRSYLHAYASHS--LRSIFDVNKLDLVKLAKSFGFPTPPRVDIQLGAS 600
Query: 888 KNKEELK 894
K+ K
Sbjct: 601 MAKDRNK 607
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 168 MGFTKMTEVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSSLRFK--PRNGTGV 225
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELALQ + +L K + + GG ++E ++ KGI++L+ATPGRLL
Sbjct: 226 VVVSPTRELALQIFHVARELTKHHSQTC-GIVIGGANRRAEAEKLSKGINLLIATPGRLL 284
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL KQ QS+L SAT T
Sbjct: 285 DHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPKQ--DRQSMLFSATQT 340
>gi|15239187|ref|NP_201391.1| DEAD-box ATP-dependent RNA helicase 27 [Arabidopsis thaliana]
gi|108861887|sp|Q9SB89.2|RH27_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 27
gi|2827700|emb|CAA16673.1| DEAD box ATP dependent helicase protein [Arabidopsis thaliana]
gi|9759574|dbj|BAB11137.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|16649121|gb|AAL24412.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|24899721|gb|AAN65075.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|332010738|gb|AED98121.1| DEAD-box ATP-dependent RNA helicase 27 [Arabidopsis thaliana]
Length = 633
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 275/490 (56%), Gaps = 50/490 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T +Q +I P++ G DVL ++TGSGKTLA+ IP ++ L R K + ++G
Sbjct: 172 MGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELL--YRVKFTPRNGTGV 229
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+Q+ + +L K + V + GGEK K+E + KG+++LVATPGRLL
Sbjct: 230 LVICPTRELAIQSYGVAKELLKYHSQTV-GKVIGGEKRKTEAEILAKGVNLLVATPGRLL 288
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRIL+Q +E D+ + L +L K + Q+ L SAT +
Sbjct: 289 DHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR---QTSLFSATQSAK 345
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
V+ LA ++L +P+ ID + V + L+Q + V P +RL+ L +F L +
Sbjct: 346 VEDLARVSLTSPVYIDVDEGR-------KEVTNEGLEQGYCVVPSAMRLLFLLTF-LKRF 397
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
Q + K++VF +T +H EL + ++ G + Q++RT F F
Sbjct: 398 QG-----KKKIMVFFSTCKSTKFHAELFRYI---KFDCLEIRGGIDQNKRTPTFLQFIKA 449
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSE 768
++G+L+CT+VAARGLD P VDWIVQY P + TDY+HRVGRTAR G +G +LL L P E
Sbjct: 450 ETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQE 509
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+K ++ L+ +I +EE + ++ + LL VK E+ + +
Sbjct: 510 LKFIQYLKAAKIPVEEHEFEE--KKLLDVK---------------------PFVENLISE 546
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI--GK 886
L SA + Y +++ Y S+S ++ +FN Q++L A SF D P V I G
Sbjct: 547 NYALKESAKEAYKTYISGYDSHS--MKDVFNVHQLNLTEVATSFGFSDPPKVALKIDRGG 604
Query: 887 PKNKEELKNK 896
++K E NK
Sbjct: 605 YRSKREPVNK 614
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 114/176 (64%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I P++ G DVL ++TGSGKTLA+ IP ++ L R K + ++G
Sbjct: 172 MGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELL--YRVKFTPRNGTGV 229
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+Q+ + +L K + V + GGEK K+E + KG+++LVATPGRLL
Sbjct: 230 LVICPTRELAIQSYGVAKELLKYHSQTV-GKVIGGEKRKTEAEILAKGVNLLVATPGRLL 288
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T F ++ LV+DEADRIL+Q +E D+ + L +L K + Q+ L SAT
Sbjct: 289 DHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR---QTSLFSAT 341
>gi|321252297|ref|XP_003192357.1| ATP-dependent RNA helicase of the DEAD-box family involved in
ribosomal biogenesis ; Dbp3p [Cryptococcus gattii WM276]
gi|317458825|gb|ADV20570.1| ATP-dependent RNA helicase of the DEAD-box family involved in
ribosomal biogenesis, putative ; Dbp3p [Cryptococcus
gattii WM276]
Length = 639
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 278/508 (54%), Gaps = 59/508 (11%)
Query: 396 PGIH----PFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
PGI PF NL+ E M +T VQ +I P+L G DVL ++TGSGKT+
Sbjct: 154 PGIAYERVPFSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTM 213
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
A+ +P ++ L +R K G+ +II PTRELALQ + +L + + L GG
Sbjct: 214 AFLVPSVELLSTLRFKPVNGTGV--IIISPTRELALQIFGVAKELMQDHSQTF-GVLMGG 270
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
K+E ++ KG++++VATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++
Sbjct: 271 ANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMK 330
Query: 565 EFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPD 623
+ +++L + QS+L SAT T V LA ++L+ P+ I+ ++ + D
Sbjct: 331 QIIKLLPSE--NRQSMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTA-------D 381
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+Q ++V R + L +F+ ++ + K++VF ++ + YH ELL+ +
Sbjct: 382 MLEQGYVVCESDQRFMLLFTFL-------KKNLKKKVIVFFSSCNSVKYHAELLNYI--- 431
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
++ LHG Q +RT F F + +G+L+CTDVAARGLD+P VDWI+Q+ P D
Sbjct: 432 DVPVLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRD 491
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
Y+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E +
Sbjct: 492 YIHRVGRTARAGKSGKSLLFLLPSELGFLRFLKVAKVPLNEYQFPQ-------------- 537
Query: 804 SRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQI 863
++AD +Q ES + + L+TSA GY S+++ YASYS L+ IF+ ++
Sbjct: 538 KKVAD---------VQKQLESLISKNHYLNTSARDGYRSYLQAYASYS--LKKIFDVNKL 586
Query: 864 HLGHFAKSFALRDAPSVISGIGKPKNKE 891
L K+F P V +G K K+
Sbjct: 587 DLAKVGKAFGFSVPPKVNISVGSIKAKK 614
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKT+A+ +P ++ L +R K G+
Sbjct: 179 MGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVELLSTLRFKPVNGTGV-- 236
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + L GG K+E ++ KG++++VATPGRLL
Sbjct: 237 IIISPTRELALQIFGVAKELMQDHSQTF-GVLMGGANRKAEADKLVKGVNLIVATPGRLL 295
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 296 DHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSE--NRQSMLFSATQT 351
>gi|403215528|emb|CCK70027.1| hypothetical protein KNAG_0D02780 [Kazachstania naganishii CBS
8797]
Length = 476
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 174/480 (36%), Positives = 273/480 (56%), Gaps = 49/480 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T++TTVQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 25 EKMGFTKMTTVQERTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIETLHAL--KFKPRNGT 82
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGR
Sbjct: 83 GVIVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLAKGVNILIATPGR 141
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + + IL + + QS+L SAT T
Sbjct: 142 LLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIRILPNE--ERQSMLFSATQT 199
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ TD H+T D L +Q ++V R + L SF+
Sbjct: 200 TKVEDLARISLRKGPLFINVVPETD-HSTADGL------EQGYVVCESDKRFLLLFSFL- 251
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 252 ------KRNQKKKVIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 302
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FLI
Sbjct: 303 CNAERGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLI 362
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E + QN ++ NV Q E
Sbjct: 363 PNELGFLRYLKAAKVPLNEYEFP---QNKIA-------------NV-------QSQLEKL 399
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ LH +A GY S+++ Y+S+S L+ ++ ++ L AKS+ P V IG
Sbjct: 400 IKSNYYLHQTAKDGYRSYLQAYSSHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 457
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 163/330 (49%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++TTVQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 27 MGFTKMTTVQERTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIETLHAL--KFKPRNGTGV 84
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 85 IVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLAKGVNILIATPGRLL 143
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + + IL + + QS+L SAT T
Sbjct: 144 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIRILPNE--ERQSMLFSATQT-- 199
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L I ++ P F
Sbjct: 200 ------------TKVEDLA--------------------RISLRKGPLF----------- 216
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
I+ TD H+T D L+Q ++V R + L SF+
Sbjct: 217 ---------------INVVPETD-HSTA------DGLEQGYVVCESDKRFLLLFSFL--- 251
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 252 ----KRNQKKKVIVFLSSCNSVKYYAELLN 277
>gi|393247983|gb|EJD55490.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 552
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 260/472 (55%), Gaps = 48/472 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T VQ +I +L G DVL ++TGSGKTLA+ IP I+ L R K ++G
Sbjct: 40 MGFTNMTAVQARTIPALLAGRDVLGAARTGSGKTLAFLIPSIELL--CRLKFKPRNGTGI 97
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L T L GG K+E ++ KG+++++ATPGRL+
Sbjct: 98 IVISPTRELALQIFGVAKELMAHHTQTY-GILMGGANKKAEAEKLEKGVNLVIATPGRLM 156
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH + T+ F ++ LV+DEADRIL+ G+E + + + IL + Q S+L SAT T
Sbjct: 157 DHLQDTKGFVFRNLKALVIDEADRILEVGFEEQMKKIIAILPNEGRQ--SMLFSATQTTK 214
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
VQ LA ++L+ P+ ID D T ++ +L Q ++V P + R + L +F+
Sbjct: 215 VQDLARISLRPGPLLID----VDAEAQTSTVT---TLSQGYVVCPSERRFLLLFTFL--- 264
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 265 ----KKNMKKKIVVFFSSCNSVKYHAELLNYI---DVPVLDLHGKQKQQKRTTTFFEFCN 317
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
++G L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR G G SLLFL+PSE
Sbjct: 318 AETGTLLCTDVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRTARAGKVGKSLLFLLPSE 377
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L++ ++ + E R+A+ +Q E + +
Sbjct: 378 LGFLRYLKDAKVPLNEFAFP--------------ADRIAN---------VQSQLEKLLQK 414
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
LH SA GY ++++ YASYS L+ IF+ + L K+F P V
Sbjct: 415 NYFLHQSARDGYRAYLQSYASYS--LKKIFDINALDLAKVGKAFGFAVPPRV 464
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 108/178 (60%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I +L G DVL ++TGSGKTLA+ IP I+ L R K ++G
Sbjct: 40 MGFTNMTAVQARTIPALLAGRDVLGAARTGSGKTLAFLIPSIELL--CRLKFKPRNGTGI 97
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L T L GG K+E ++ KG+++++ATPGRL+
Sbjct: 98 IVISPTRELALQIFGVAKELMAHHTQTY-GILMGGANKKAEAEKLEKGVNLVIATPGRLM 156
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T+ F ++ LV+DEADRIL+ G+E + + + IL + QS+L SAT T
Sbjct: 157 DHLQDTKGFVFRNLKALVIDEADRILEVGFEEQMKKIIAILPNEGR--QSMLFSATQT 212
>gi|121708606|ref|XP_001272186.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143019610|sp|A1CIQ5.1|HAS1_ASPCL RecName: Full=ATP-dependent RNA helicase has1
gi|119400334|gb|EAW10760.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 625
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 287/513 (55%), Gaps = 54/513 (10%)
Query: 370 DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
D+P++ RL V P + E G+ K +NE M +T +Q+ +I P+L G
Sbjct: 126 DLPSMDAVRLPTVDGE---PQKFTEL-GLSEKTLKAINE-MGFETMTEIQRRTIPPLLAG 180
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ + +L
Sbjct: 181 RDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVLVVSPTRELALQIFGVAREL 238
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
C+ + + GG ++E ++ KG+++L+ATPGRLLDH ++T+ F ++ LV+D
Sbjct: 239 CQHHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVID 297
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAAD 608
EADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+ D
Sbjct: 298 EADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYINV-D 354
Query: 609 STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
H+T + L +Q +++ R + L SF+ + + K++VF ++ +
Sbjct: 355 HRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFSSCN 401
Query: 669 MADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD+P
Sbjct: 402 CVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPA 458
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PSEV ++ L+ R+ +
Sbjct: 459 VDWIIQFDPPDDPRDYIHRVGRTARGANAKGRSLMFLQPSEVGFLKHLKEARVPV----- 513
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
V+ E S++ + +Q E + Q L+ SA +GY S+++ Y
Sbjct: 514 ---------VEFEFPASKIVN---------VQSQLEKLIGQNYYLNKSAKEGYRSYLQAY 555
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
AS+S LR +F+ ++ L AK F P +
Sbjct: 556 ASHS--LRSVFDVHKLDLVKVAKGFGFSTPPRI 586
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 161 MGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 218
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +LC+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 219 LVVSPTRELALQIFGVARELCQHHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLL 277
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 278 DHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 333
>gi|323332616|gb|EGA74022.1| Dbp7p [Saccharomyces cerevisiae AWRI796]
Length = 581
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 299/589 (50%), Gaps = 85/589 (14%)
Query: 410 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 466
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 1 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 60
Query: 467 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 526
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 61 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 120
Query: 527 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQ 573
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ K
Sbjct: 121 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKL 180
Query: 574 KPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTP 633
+ +L SATLT V RL + L++ I D T V PD L Q + P
Sbjct: 181 PHKLVHMLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVP 237
Query: 634 PKLRLVALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-- 683
PKLRLV LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 238 PKLRLVTLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHK 293
Query: 684 --------------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKS 711
++ +KLHGS+SQ RT + F K
Sbjct: 294 NLTGDSVRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKH 353
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVK 770
++ CTDVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K
Sbjct: 354 LIMFCTDVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEK 413
Query: 771 LVEELQ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----T 813
++ +Q ++ I + K + +N ++ + S+ D G+ E T
Sbjct: 414 YMDYIQPYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDT 473
Query: 814 AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFA 873
AT ++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF
Sbjct: 474 NATTWHLNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNMKFLHLGHLAKSFG 533
Query: 874 LRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
LR+ P + G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 534 LRERPKAM-GLQSSKDGNSEKKPTKENSKNKMFRI-ARMAEKQIASEFN 580
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 1 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 60
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 61 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 120
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 121 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 173
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 174 SE--------------KFPKLPHKLV------------------------------HMLC 189
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 190 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 246
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 247 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 286
>gi|207343401|gb|EDZ70870.1| YKR024Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323336763|gb|EGA78027.1| Dbp7p [Saccharomyces cerevisiae Vin13]
Length = 581
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 299/589 (50%), Gaps = 85/589 (14%)
Query: 410 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 466
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 1 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 60
Query: 467 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 526
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 61 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 120
Query: 527 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQ 573
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ K
Sbjct: 121 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKL 180
Query: 574 KPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTP 633
+ +L SATLT V RL + L++ I D T V PD L Q + P
Sbjct: 181 PHKLVHMLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVP 237
Query: 634 PKLRLVALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-- 683
PKLRLV LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 238 PKLRLVTLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHK 293
Query: 684 --------------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKS 711
++ +KLHGS+SQ RT + F K
Sbjct: 294 NLTGDSVRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKH 353
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVK 770
++ CTDVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K
Sbjct: 354 LIMFCTDVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEK 413
Query: 771 LVEELQ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----T 813
++ +Q ++ I + K + +N ++ + S+ D G+ E T
Sbjct: 414 YMDYIQPYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDT 473
Query: 814 AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFA 873
AT ++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF
Sbjct: 474 NATTWHLNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFG 533
Query: 874 LRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
LR+ P + G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 534 LRERPKAM-GLQSSKDGNSEKKPTKENSKNKMFRI-ARMAEKQIASEFN 580
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 1 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 60
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 61 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 120
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 121 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 173
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 174 SE--------------KFPKLPHKLV------------------------------HMLC 189
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 190 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 246
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 247 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 286
>gi|340721973|ref|XP_003399387.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Bombus terrestris]
Length = 579
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 273/507 (53%), Gaps = 50/507 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 121 EDMGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYKL--KFMPRNGT 178
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTREL++QT + +L K + + L GG ++E ++ KGI+I+VATPGR
Sbjct: 179 GCIIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGANRQTEAQKLAKGINIIVATPGR 237
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ ++L SAT T
Sbjct: 238 LLDHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKR---LTMLFSATQT 294
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
+ L + L+ P+ + D + + L+Q ++V P + R + L +F+
Sbjct: 295 KRTEMLTTLALKKEPVYVGVDDDKEKATV-------EGLEQGYVVCPSEKRFLLLFTFL- 346
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 347 ------KKNRKKKVMVFFSSCMSVKYHHELLNYI---DLPVLSIHGKQKQTKRTTTFFQF 397
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L
Sbjct: 398 CNASSGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 457
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ R+ + E +++AD +Q+ E
Sbjct: 458 PEELGFLRYLKQARVPVNEFDF--------------SWNKIAD---------IQLQLEKL 494
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
V + L+ SA + + ++VR Y S+ L+ IF+ + + L AKSF P+V +G
Sbjct: 495 VSKNYFLNMSAKEAFKAYVRAYDSHH--LKQIFDIETLDLSKVAKSFGFVVPPAVDLKVG 552
Query: 886 KPKNKEELKNKKMAINKEKSFKQRGNF 912
KN K FK R NF
Sbjct: 553 VSKNSRPRKKLGGGGYGYSKFKSRSNF 579
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 143/248 (57%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 123 MGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGC 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + + L GG ++E ++ KGI+I+VATPGRLL
Sbjct: 181 IIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGANRQTEAQKLAKGINIIVATPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ ++L SAT T
Sbjct: 240 DHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKR---LTMLFSATQTKR 296
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
T T LK V V D+ ++ L+QGY E+ LKK + +
Sbjct: 297 TEMLT-TLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVM 355
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 356 VFFSSCMS 363
>gi|395519421|ref|XP_003763848.1| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 2 [Sarcophilus
harrisii]
Length = 665
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 265/473 (56%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 191 MGFTNMTAIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKL--KFMPRNGTGV 248
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L S+ + GG +E ++ GI+I+VATPGRLL
Sbjct: 249 LILSPTRELAMQTFGVLKELM-SYHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLL 307
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 308 DHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQTRK 364
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D D L+Q ++V P + R + L +F+
Sbjct: 365 VEDLAKISLKKEPLYVGVDDDKDTATV-------DGLEQGYVVCPSEKRFLLLFTFL--- 414
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 415 ----KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVMAIHGKQKQNKRTTTFFQFCN 467
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 468 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPE 527
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 528 ELGFLRYLKQAKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 564
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S+VR Y S+S L+ I+N ++L A SF + P V
Sbjct: 565 KNYFLHKSAQEAYKSYVRAYDSHS--LKQIYNVNSLNLPQVALSFGFKVPPFV 615
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 191 MGFTNMTAIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKL--KFMPRNGTGV 248
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L S+ + GG +E ++ GI+I+VATPGRLL
Sbjct: 249 LILSPTRELAMQTFGVLKELM-SYHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLL 307
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 308 DHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 362
>gi|254565179|ref|XP_002489700.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|238029496|emb|CAY67419.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|328350119|emb|CCA36519.1| ATP-dependent RNA helicase DDX18 [Komagataella pastoris CBS 7435]
Length = 546
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 282/499 (56%), Gaps = 54/499 (10%)
Query: 387 FAPTSYEEFPGI---HPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
++ T YE F + P +K N M T++T VQ +I P+L G DVL ++TGSGKT
Sbjct: 78 YSSTVYENFTDLKLSEPTLKAIGN--MGFTKMTAVQARTIPPLLAGRDVLGAAKTGSGKT 135
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+ IP I+ L + K ++G A++I PTRELALQ + +L +S + L G
Sbjct: 136 LAFLIPAIEMLYSL--KFKPRNGTGAIVITPTRELALQIFGVARELMESHSQTF-GILIG 192
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G ++E ++ KG++I++ATPGRLLDH ++T+ F ++ L++DEADRIL+ G+E ++
Sbjct: 193 GANRRAEAEKLMKGVNIIIATPGRLLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEM 252
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIP 622
+ ++IL + Q ++L SAT T V+ LA ++L + P+ I+ D N T ++
Sbjct: 253 KQIIKILPNENRQ--TMLFSATQTTKVEDLARVSLRKGPLYIN----VDSENETSTV--- 303
Query: 623 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG 682
D L+Q ++V R + L SF+ +++ K++VF+++ + Y++ELL+ +
Sbjct: 304 DGLEQGYVVCDSDKRFLLLFSFL-------KRNQKKKIIVFLSSCNSVKYYSELLNYI-- 354
Query: 683 ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSST 742
++ LHG Q +RT F F + GVLICTDVAARGLD+P VDWI+Q+ P
Sbjct: 355 -DLPVLDLHGKQKQQKRTNTFFEFCNATQGVLICTDVAARGLDIPSVDWIIQFDPPDDPR 413
Query: 743 DYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
DY+HRVGRTAR + +G SL+FLIPSE+ + L+ ++ + E E
Sbjct: 414 DYIHRVGRTARGSNGKGKSLMFLIPSELGFLRYLKAAKVPLNE--------------FEF 459
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
+++A+ +Q E + L+ SA GYT++++ YAS+ L+ ++
Sbjct: 460 PTNKIAN---------VQSQLEKLIKSNYWLNQSARDGYTAYLQAYASHH--LKTVYQID 508
Query: 862 QIHLGHFAKSFALRDAPSV 880
++ L A+SF P V
Sbjct: 509 KLDLNKVAQSFGFSVPPRV 527
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G A
Sbjct: 102 MGFTKMTAVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGA 159
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L +S + L GG ++E ++ KG++I++ATPGRLL
Sbjct: 160 IVITPTRELALQIFGVARELMESHSQTF-GILIGGANRRAEAEKLMKGVNIIIATPGRLL 218
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 219 DHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIKILPNENR--QTMLFSATQT 274
>gi|398412610|ref|XP_003857625.1| ATP-dependent RNA helicase HAS1 [Zymoseptoria tritici IPO323]
gi|339477510|gb|EGP92601.1| hypothetical protein MYCGRDRAFT_65342 [Zymoseptoria tritici IPO323]
Length = 638
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 279/502 (55%), Gaps = 60/502 (11%)
Query: 401 FMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQK 453
F + NL+E GM +T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+
Sbjct: 164 FTELNLSERTMKAINGMPFDTMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 223
Query: 454 LQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKAR 513
L +R K ++G +++ PTRELALQ + +L ++ T + GG ++E +
Sbjct: 224 LYSLRFK--PRNGTGVIVVSPTRELALQIFGVARELMENHTQTY-GIVIGGANRRAEAEK 280
Query: 514 IRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 573
+ KG+++L+ATPGRLLDH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+
Sbjct: 281 LAKGVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKE 340
Query: 574 KPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVT 632
Q++L SAT T V+ LA ++L+ P+ I+ D+ + H+T L +Q +++
Sbjct: 341 --DRQTMLFSATQTTKVEDLARISLRPGPLYINV-DNEEEHSTVSGL------EQGYVIC 391
Query: 633 PPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHG 692
+R L +F+ + K++VF ++ + +Y++ELL+ + ++ LHG
Sbjct: 392 EADMRFRLLFTFL-------KRHPQKKIIVFFSSCNCVNYYSELLNYI---DLPVLGLHG 441
Query: 693 SMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTA 752
Q +RT F F + K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTA
Sbjct: 442 KQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTA 501
Query: 753 RVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
R + +G SL+FL P+EV + L+ ++ + E ++ ++ D
Sbjct: 502 RGANAKGKSLMFLQPNEVGFLNHLKEAKVPLVEFEIPP--------------KKILD--- 544
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+Q E + + L+ SA GY S+++ YAS+S LR +FN Q+ L AK
Sbjct: 545 ------IQSQLEMLIGKNYYLNKSAKDGYRSYLQAYASHS--LRSVFNIHQLDLKKVAKG 596
Query: 872 FALRDAPSVISGIG----KPKN 889
F P V +G KP N
Sbjct: 597 FGFGVPPKVDINLGASMKKPDN 618
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 180 MPFDTMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLRFK--PRNGTGV 237
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L ++ T + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 238 IVVSPTRELALQIFGVARELMENHTQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 296
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 297 DHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKE--DRQTMLFSATQT 352
>gi|395519419|ref|XP_003763847.1| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 1 [Sarcophilus
harrisii]
Length = 640
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 265/473 (56%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 166 MGFTNMTAIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKL--KFMPRNGTGV 223
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L S+ + GG +E ++ GI+I+VATPGRLL
Sbjct: 224 LILSPTRELAMQTFGVLKELM-SYHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLL 282
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 DHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQTRK 339
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D D L+Q ++V P + R + L +F+
Sbjct: 340 VEDLAKISLKKEPLYVGVDDDKDTATV-------DGLEQGYVVCPSEKRFLLLFTFL--- 389
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 390 ----KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVMAIHGKQKQNKRTTTFFQFCN 442
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 443 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPE 502
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 503 ELGFLRYLKQAKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 539
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S+VR Y S+S L+ I+N ++L A SF + P V
Sbjct: 540 KNYFLHKSAQEAYKSYVRAYDSHS--LKQIYNVNSLNLPQVALSFGFKVPPFV 590
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 166 MGFTNMTAIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKL--KFMPRNGTGV 223
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L S+ + GG +E ++ GI+I+VATPGRLL
Sbjct: 224 LILSPTRELAMQTFGVLKELM-SYHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLL 282
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 DHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 337
>gi|449439371|ref|XP_004137459.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Cucumis
sativus]
Length = 608
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/491 (34%), Positives = 269/491 (54%), Gaps = 50/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I P L G D+L ++TGSGKTLA+ IP ++ L + + ++G
Sbjct: 144 MGFEHMTQIQARAIPPSLIGKDILGAARTGSGKTLAFLIPAVELLHHI--CFTPRNGTGV 201
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT E+ +L K + + +TGG ++E RI KG+++L+ATPGRLL
Sbjct: 202 IVICPTRELAMQTHEVAKELLKYHSQTL-GLVTGGSSRQAEADRITKGVNLLIATPGRLL 260
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +HT+ F ++ L++DEADRIL+ +E ++ + + +L K + Q+ L SAT T
Sbjct: 261 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIINLLPKNR---QTALFSATQTQK 317
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ L ++ Q+ PI ID D + V + L+Q + V P R + L SF+
Sbjct: 318 VEDLVRLSFQSTPIYIDVDDGR-------TKVTNEGLQQGYCVVPSSKRFILLYSFL--- 367
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ K++VF ++ + +H +LL + + +HG Q +RT F +F
Sbjct: 368 ----KKNLSKKVMVFFSSCNSVKFHADLLRYI---KVDCMDIHGKQKQQKRTSTFFSFIK 420
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
++G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 421 AQTGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPE 480
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E + D +LA+ +Q E V
Sbjct: 481 EIQFLRYLKAAKVPVKEYEFSD--------------KKLAN---------VQSHLEKLVG 517
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ SA Y S++ Y S+S ++ IFN ++ L A SF + P V I
Sbjct: 518 SNYYLNKSAKDAYRSYILAYNSHS--MKDIFNVHRLDLQGIAASFCFSNPPKVNLNIDSS 575
Query: 888 KNKEELKNKKM 898
+K K +K+
Sbjct: 576 ASKFRKKTRKV 586
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 80/329 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P L G D+L ++TGSGKTLA+ IP ++ L + + ++G
Sbjct: 144 MGFEHMTQIQARAIPPSLIGKDILGAARTGSGKTLAFLIPAVELLHHI--CFTPRNGTGV 201
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT E+ +L K + + +TGG ++E RI KG+++L+ATPGRLL
Sbjct: 202 IVICPTRELAMQTHEVAKELLKYHSQTL-GLVTGGSSRQAEADRITKGVNLLIATPGRLL 260
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +HT+ F ++ L++DEADRIL+ +E ++ + + +L K + Q+ L SAT T
Sbjct: 261 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIINLLPKNR---QTALFSATQT-- 315
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
KVE LV + FQS
Sbjct: 316 ------------QKVEDLV--------------------------RLSFQST-------- 329
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
PI ID D + V + L+Q + V P R + L SF+
Sbjct: 330 ------------PIYIDVDDGR-------TKVTNEGLQQGYCVVPSSKRFILLYSFL--- 367
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K++VF ++ + +H +LL
Sbjct: 368 ----KKNLSKKVMVFFSSCNSVKFHADLL 392
>gi|429862066|gb|ELA36725.1| ATP dependent RNA helicase [Colletotrichum gloeosporioides Nara
gc5]
Length = 755
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 299/571 (52%), Gaps = 72/571 (12%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
GI + L++ + + T +Q I Q I + D V++QTGSGKTLAY +PI+Q++
Sbjct: 156 GISRRLALTLSDKIQLKAPTAIQAKVIPQLITEDSDAFVQAQTGSGKTLAYLLPILQRIL 215
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
+ +I R G++A+++ PTREL Q + K+ + +V + + GGE SEK+R+R
Sbjct: 216 SVEGQIKRDSGLFAIVLAPTRELCRQIDVVLAKILPPY--LVSTTVIGGESKHSEKSRLR 273
Query: 516 KGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK- 574
KG++IL+ATPGRL DH +T++L V LVLDE DR+++ G+E AE I+ K +
Sbjct: 274 KGVNILIATPGRLSDHLNNTKSLDVGTVRWLVLDEGDRLMEMGFE---AELRTIVGKIRE 330
Query: 575 ----------------PQFQ-SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTD 617
P+ + ++L SAT+ VQ+L ++L++ + + ++
Sbjct: 331 GGLSDTTANGVSLTGLPKRRVTVLCSATMKMNVQKLGEISLEDAVHVTTSEEDQDGAEEV 390
Query: 618 SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 677
P LKQ++++ P KLRLV L S + K + K +VF++ D DYH +LL
Sbjct: 391 KFEAPAQLKQNYVIVPAKLRLVTLISLL--KSTFSRKGSVMKAIVFLSCADSVDYHFDLL 448
Query: 678 STVLGE---------------------------NIAFFKLHGSMSQSERTEVFKTFRSVK 710
E NI +LHGS+ Q RT ++ S K
Sbjct: 449 RKPQSEDEKSSANPSGTANTVAPAGYITSPANTNIVLHRLHGSLPQPVRTATLASYSSCK 508
Query: 711 S-GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-E 768
VLI TD+A+RGLD+P V+ +V+Y ++ D+VHR+GRTAR G G ++LFL+P E
Sbjct: 509 DPTVLITTDIASRGLDVPSVELVVEYDPAFAAADHVHRIGRTARAGRPGKAVLFLMPGCE 568
Query: 769 VKLVEELQNRRIRIEEIKLKD-CLQNLLSVKMEGDLSRLA------DGNVETAATALQMS 821
+E L+ + + +L D LQ L+ ME + A D + A LQ+
Sbjct: 569 EGYIEHLKAKNATPPKPELYDTVLQRGLTTPMEFPVETDAKPLPATDKSFNARAENLQLH 628
Query: 822 FESAVL--QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
E +L K L A K + S +R YA++ K+ R F+ ++HLGH AK++ LR+AP
Sbjct: 629 LEQRLLLPSSKTLLDEARKAFRSHIRAYATHVKEERVFFDITELHLGHMAKAYGLREAP- 687
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRG 910
SG+G+ + + K + K+K+ +RG
Sbjct: 688 --SGVGRGDH-----SGKKTVMKQKAAGRRG 711
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 158/322 (49%), Gaps = 64/322 (19%)
Query: 15 QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTL 74
Q I + D V++QTGSGKTLAY +PI+Q++ + +I R G++A+++ PTREL Q
Sbjct: 184 QLITEDSDAFVQAQTGSGKTLAYLLPILQRILSVEGQIKRDSGLFAIVLAPTRELCRQID 243
Query: 75 EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKV 134
+ K+ + +V + + GGE SEK+R+RKG++IL+ATPGRL DH +T++L V
Sbjct: 244 VVLAKILPPY--LVSTTVIGGESKHSEKSRLRKGVNILIATPGRLSDHLNNTKSLDVGTV 301
Query: 135 EHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL----LSATLTP---ATCWCKHT 187
LVLDE DR+++ G+E AE I+ K + S +S T P T C T
Sbjct: 302 RWLVLDEGDRLMEMGFE---AELRTIVGKIREGGLSDTTANGVSLTGLPKRRVTVLCSAT 358
Query: 188 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAG 247
+ K+ + L++A + ++D AE + +F++
Sbjct: 359 MKMNVQKLGEISLEDAVHVTTSEEDQDGAEEV--------KFEA---------------- 394
Query: 248 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 307
P LKQ++++ P KLRLV L S + K +
Sbjct: 395 --------------------------PAQLKQNYVIVPAKLRLVTLISLL--KSTFSRKG 426
Query: 308 EESKMLVFMATQDMADYHTELL 329
K +VF++ D DYH +LL
Sbjct: 427 SVMKAIVFLSCADSVDYHFDLL 448
>gi|449487044|ref|XP_004157478.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
sativus]
Length = 592
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/491 (34%), Positives = 269/491 (54%), Gaps = 50/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I P L G D+L ++TGSGKTLA+ IP ++ L + + ++G
Sbjct: 128 MGFEHMTQIQARAIPPSLIGKDILGAARTGSGKTLAFLIPAVELLHHI--CFTPRNGTGV 185
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT E+ +L K + + +TGG ++E RI KG+++L+ATPGRLL
Sbjct: 186 IVICPTRELAMQTHEVAKELLKYHSQTL-GLVTGGSSRQAEADRITKGVNLLIATPGRLL 244
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +HT+ F ++ L++DEADRIL+ +E ++ + + +L K + Q+ L SAT T
Sbjct: 245 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIINLLPKNR---QTALFSATQTQK 301
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ L ++ Q+ PI ID D + V + L+Q + V P R + L SF+
Sbjct: 302 VEDLVRLSFQSTPIYIDVDDGR-------TKVTNEGLQQGYCVVPSSKRFILLYSFL--- 351
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ K++VF ++ + +H +LL + + +HG Q +RT F +F
Sbjct: 352 ----KKNLSKKVMVFFSSCNSVKFHADLLRYI---KVDCMDIHGKQKQQKRTSTFFSFIK 404
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
++G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 405 AQTGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPE 464
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E + D +LA+ +Q E V
Sbjct: 465 EIQFLRYLKAAKVPVKEYEFSD--------------KKLAN---------VQSHLEKLVG 501
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ SA Y S++ Y S+S ++ IFN ++ L A SF + P V I
Sbjct: 502 SNYYLNKSAKDAYRSYILAYNSHS--MKDIFNVHRLDLQGIAASFCFSNPPKVNLNIDSS 559
Query: 888 KNKEELKNKKM 898
+K K +K+
Sbjct: 560 ASKFRKKTRKV 570
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 80/329 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P L G D+L ++TGSGKTLA+ IP ++ L + + ++G
Sbjct: 128 MGFEHMTQIQARAIPPSLIGKDILGAARTGSGKTLAFLIPAVELLHHI--CFTPRNGTGV 185
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT E+ +L K + + +TGG ++E RI KG+++L+ATPGRLL
Sbjct: 186 IVICPTRELAMQTHEVAKELLKYHSQTL-GLVTGGSSRQAEADRITKGVNLLIATPGRLL 244
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +HT+ F ++ L++DEADRIL+ +E ++ + + +L K + Q+ L SAT T
Sbjct: 245 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIINLLPKNR---QTALFSATQT-- 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
KVE LV + FQS
Sbjct: 300 ------------QKVEDLV--------------------------RLSFQST-------- 313
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
PI ID D + V + L+Q + V P R + L SF+
Sbjct: 314 ------------PIYIDVDDGR-------TKVTNEGLQQGYCVVPSSKRFILLYSFL--- 351
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K++VF ++ + +H +LL
Sbjct: 352 ----KKNLSKKVMVFFSSCNSVKFHADLL 376
>gi|443898399|dbj|GAC75734.1| ATP-dependent RNA helicase pitchoune [Pseudozyma antarctica T-34]
Length = 568
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/517 (34%), Positives = 285/517 (55%), Gaps = 59/517 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L + K ++G A
Sbjct: 68 MGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRL--KFKPRNGTGA 125
Query: 470 VIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VATP
Sbjct: 126 IIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVATP 180
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + + IL Q S+L SAT
Sbjct: 181 GRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVNILPNDNRQ--SMLFSAT 238
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T VQ LA ++L+ P+ I+ D+ +T S L+Q ++V R + L +F
Sbjct: 239 QTTKVQDLARISLRPGPLYINV--HADLAASTVS-----RLEQGYVVCESDRRFLLLFTF 291
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++ K++VFM++ + YH++LL+ + ++ LHG Q +RT F
Sbjct: 292 L-------KKNAGKKIIVFMSSCNSVKYHSDLLNFI---DVPVLDLHGKQKQQKRTNTFF 341
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
+ + SG L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G+ G SLLFL
Sbjct: 342 EYCNAPSGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNAGKSLLFL 401
Query: 765 IPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
+PSE+ + L+ ++ + E D + N+ +G L +L
Sbjct: 402 LPSELGFLRFLKVAKVPLNEYTFPSDKVANV-----QGQLEKL----------------- 439
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+ + LH SA GY S+++ Y SYS L+ IF+ ++ L AK++ P V
Sbjct: 440 --IAKNYYLHQSARDGYRSYLQAYGSYS--LKRIFDIHKLDLAKVAKAYGFSVPPKVNIT 495
Query: 884 IGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSE 920
IG ++ +K+ ++ E + G+ + K+ S+
Sbjct: 496 IGTSLKAKDSGSKRKEVDAEGG-EDDGDINPKRQQSD 531
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L + K ++G A
Sbjct: 68 MGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRL--KFKPRNGTGA 125
Query: 61 VIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VATP
Sbjct: 126 IIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVATP 180
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + + IL QS+L SAT
Sbjct: 181 GRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVNILPNDNR--QSMLFSAT 238
Query: 177 LT 178
T
Sbjct: 239 QT 240
>gi|302697571|ref|XP_003038464.1| hypothetical protein SCHCODRAFT_46575 [Schizophyllum commune H4-8]
gi|300112161|gb|EFJ03562.1| hypothetical protein SCHCODRAFT_46575 [Schizophyllum commune H4-8]
Length = 528
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/489 (36%), Positives = 266/489 (54%), Gaps = 48/489 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M + +T VQ SI +L G DVL ++TGSGKTLA+ IP I+ L ++ K GI
Sbjct: 31 MGFSTMTPVQAKSIPVLLAGKDVLGAARTGSGKTLAFLIPAIEMLHRLKFKPMNGTGI-- 88
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + L + + GG ++E +++KG+++L+ATPGRLL
Sbjct: 89 IIITPTRELALQIFGVAKDLMAHHSQTY-GIVMGGANRRAEMEKLQKGVNLLIATPGRLL 147
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++++ F ++ LV+DEADRIL+ G+E ++ + IL + Q S+L SAT T
Sbjct: 148 DHLQNSKGFVFRNLKALVIDEADRILEVGFEEEMKRIISILPNENRQ--SMLFSATQTTK 205
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
VQ LA ++L+ P+ ID D T ++ +L Q ++V P R + L +F
Sbjct: 206 VQDLARISLRPGPVSID----VDKEEATSTV---STLSQGYVVCPSDRRFLLLFTF---- 254
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + + K++VF ++ + YH ELL+ + + LHG Q +RT F F +
Sbjct: 255 ---LKKHLKKKIIVFFSSCNSVKYHAELLNYI---DTPVLDLHGKQKQQKRTNTFFEFIN 308
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+SG+L+CTDVAARGLD+P VDWI+QY P DY+HRVGRTAR G G SLLFL+PSE
Sbjct: 309 AESGILLCTDVAARGLDIPRVDWIIQYDPPDDPRDYIHRVGRTARAGKVGKSLLFLLPSE 368
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L+ ++ + E +++A+ +Q E + +
Sbjct: 369 LGFLRFLKESKVPLNEYSFP--------------ANKIAN---------VQSQLEKLLQK 405
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPK 888
LH SA GY S+++ YASYS L+ IF+ + L K+F P V IG+ K
Sbjct: 406 NYFLHQSAKDGYRSYLQAYASYS--LKKIFDVNALDLAKVGKAFGFTVPPRVNVNIGEGK 463
Query: 889 NKEELKNKK 897
K K+
Sbjct: 464 GNATKKRKR 472
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 109/178 (61%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + +T VQ SI +L G DVL ++TGSGKTLA+ IP I+ L ++ K GI
Sbjct: 31 MGFSTMTPVQAKSIPVLLAGKDVLGAARTGSGKTLAFLIPAIEMLHRLKFKPMNGTGI-- 88
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + L + + GG ++E +++KG+++L+ATPGRLL
Sbjct: 89 IIITPTRELALQIFGVAKDLMAHHSQTY-GIVMGGANRRAEMEKLQKGVNLLIATPGRLL 147
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++++ F ++ LV+DEADRIL+ G+E ++ + IL + QS+L SAT T
Sbjct: 148 DHLQNSKGFVFRNLKALVIDEADRILEVGFEEEMKRIISILPNENR--QSMLFSATQT 203
>gi|344300784|gb|EGW31105.1| ATP-dependent RNA helicase HAS1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 560
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 273/490 (55%), Gaps = 49/490 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 114 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KIKPRNGTAV 171
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 172 IIITPTRELALQIFGVARQLMEHHSQTC-GIVIGGADRRAEAVKLGKGVNLLVATPGRLL 230
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K+T F+ ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 231 DHLKNTPGFVFNNLKALVIDEADRILEIGFEDEMKQIIKILPNE--NRQSMLFSATQTTK 288
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ TD+ D L+Q ++V R + L SF+
Sbjct: 289 VEDLARISLRPGPLYINVVPETDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL--- 338
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+ + K++VF+++ + +++ELL+ + ++ LHG Q +RT F F +
Sbjct: 339 KRNIKK----KIIVFLSSCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 391
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 392 AKQGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 451
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E + +++A+ +Q +
Sbjct: 452 ELGFLRYLKAANVPLNEFEFPS--------------NKIAN---------IQSQLVKLIK 488
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+LH SA GY ++++ YAS+S L+ ++ ++ L KSF P V IG
Sbjct: 489 TNYLLHQSAKDGYRAYLQAYASHS--LKTVYQIDKLDLVKVGKSFGFEVPPKVNITIGAS 546
Query: 888 KNKEELKNKK 897
E K+KK
Sbjct: 547 GKSIEKKHKK 556
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 114 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KIKPRNGTAV 171
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 172 IIITPTRELALQIFGVARQLMEHHSQTC-GIVIGGADRRAEAVKLGKGVNLLVATPGRLL 230
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T F+ ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 231 DHLKNTPGFVFNNLKALVIDEADRILEIGFEDEMKQIIKILPNE--NRQSMLFSATQT 286
>gi|255723333|ref|XP_002546600.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
gi|240130731|gb|EER30294.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
Length = 572
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/487 (35%), Positives = 275/487 (56%), Gaps = 49/487 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 131 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 188
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + + + GG + E ++ KG+++LVATPGRLL
Sbjct: 189 IIITPTRELALQIFGVARELMQYHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLL 247
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K+T FS ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 248 DHLKNTPGFVFSNLKALVIDEADRILEIGFEDEMKQIIKILPNE--DRQSMLFSATQTTK 305
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA M+L+ P+ I+ D+ D L+Q ++V R + L SF+
Sbjct: 306 VEDLARMSLRPGPLYINVVPDKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL--- 355
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + +++ELL+ + ++ LHG Q +RT F F +
Sbjct: 356 KRNVKK----KIIVFLSSCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 408
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 409 AKQGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 468
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E + +++A N+++ T L +
Sbjct: 469 ELGFLRYLKAAKVPLNEYEFPS--------------NKIA--NIQSQLTKL-------IK 505
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+L+ SA GY ++++ YAS+ L+ ++ ++ L A SF L P V IG
Sbjct: 506 TNYLLNQSAKDGYRAYLQAYASHG--LKTVYQIDKLDLKKVASSFGLDQVPRVNLSIGST 563
Query: 888 KNKEELK 894
K+ ++ K
Sbjct: 564 KSNKKQK 570
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 131 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 188
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG + E ++ KG+++LVATPGRLL
Sbjct: 189 IIITPTRELALQIFGVARELMQYHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLL 247
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T FS ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 248 DHLKNTPGFVFSNLKALVIDEADRILEIGFEDEMKQIIKILPNE--DRQSMLFSATQT 303
>gi|425768575|gb|EKV07093.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum PHI26]
gi|425776136|gb|EKV14370.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum Pd1]
Length = 602
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/523 (34%), Positives = 286/523 (54%), Gaps = 68/523 (13%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNE-------GMNITQVTTVQ 419
N D+P + RL P +E + F + NL+E M T +T +Q
Sbjct: 99 NGTDLPTMEDVRL-PQTEG-----------KLQKFTELNLSEKTMQGINDMGFTTMTEIQ 146
Query: 420 QLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELA 479
Q ++ P+L G DVL ++TGSGKTLA+ +P I+ L +R K ++G +++ PTRELA
Sbjct: 147 QRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHALRFKP--RNGTGVLVVSPTRELA 204
Query: 480 LQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLK 539
LQ + +L + + GG ++E ++ KG+++L+ATPGRLLDH ++T+
Sbjct: 205 LQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFI 263
Query: 540 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ 599
F ++ LV+DEADRIL+ G+E ++ + ++IL K+ + Q++L SAT T V+ LA ++L+
Sbjct: 264 FKNLKTLVIDEADRILEVGFEDEMRQIVKILPKE--ERQTMLFSATQTTKVEDLARISLR 321
Query: 600 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 658
P+ I+ D + H+T L +Q ++V R + L SF+ + +
Sbjct: 322 PGPLYINV-DHSKEHSTVAGL------EQGYVVCEADKRFLLLFSFL-------KRNLKK 367
Query: 659 KMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTD 718
K++VF ++ + YH ELL+ + ++ +LHG Q +RT F F + K G LICTD
Sbjct: 368 KIIVFFSSCNCVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTD 424
Query: 719 VAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQN 777
VAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PSEV ++ L++
Sbjct: 425 VAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGAEGKGRSLMFLQPSEVGFLKHLKD 484
Query: 778 RRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSAC 837
R+ + V+ E S++ + +Q E + Q L+ SA
Sbjct: 485 ARVPV--------------VEFEFPASKIVN---------VQSQLEKLIGQNYYLNKSAK 521
Query: 838 KGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
GY S+++ YAS+S LR +F+ ++ L AK F P +
Sbjct: 522 DGYRSYLQAYASHS--LRTVFDVNKLDLVKVAKGFGFNAPPRI 562
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ ++ P+L G DVL ++TGSGKTLA+ +P I+ L +R K ++G
Sbjct: 137 MGFTTMTEIQQRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHALRFKP--RNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 195 LVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLL 253
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL K+ + Q++L SAT T
Sbjct: 254 DHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILPKE--ERQTMLFSATQT 309
>gi|380473069|emb|CCF46469.1| ATP-dependent RNA helicase HAS1 [Colletotrichum higginsianum]
Length = 605
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 303/560 (54%), Gaps = 69/560 (12%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQ 419
++ D+PN + L PV A H F + NL+E M T++T +Q
Sbjct: 105 DSTDLPNRDSLTLPPVVGA-----------EAHDFSQLNLSEKTMKAIQEMGFTKMTEIQ 153
Query: 420 QLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELA 479
+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G +++ PTRELA
Sbjct: 154 RRGIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLHALRFKP--RNGTGVIVVSPTRELA 211
Query: 480 LQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLK 539
LQ + +L + + GG ++E +++KG+++L+ATPGRLLDH ++T +
Sbjct: 212 LQIFGVARELMAHHSQTY-GIVIGGXNRRAEADKLQKGVNLLIATPGRLLDHLQNTPFV- 269
Query: 540 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ 599
F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T V+ LA ++L+
Sbjct: 270 FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKN--DRQTMLFSATQTTKVEDLARISLR 327
Query: 600 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 658
P+ ++ D +H+T ++L +Q +++ R + L SF+ + +
Sbjct: 328 PGPLYVNV-DEEKLHSTVENL------EQGYVICDADKRFLLLFSFL-------KRNLKK 373
Query: 659 KMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTD 718
K++VF ++ + YH ELL+ + ++ LHG Q +RT F F + K G LICTD
Sbjct: 374 KVIVFFSSCNSVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTD 430
Query: 719 VAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQN 777
VAARGLD+P VDWIVQ P DY+HRVGRTAR +G SL+FL PSEV + L+
Sbjct: 431 VAARGLDIPAVDWIVQVDPPDDPRDYIHRVGRTARGANSKGRSLMFLQPSEVGFLTHLKE 490
Query: 778 RRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSAC 837
R+ + V+ + +++A+ +Q E + Q L+ SA
Sbjct: 491 ARVPV--------------VEFDFPANKIAN---------IQSLLEKLINQNYYLNKSAK 527
Query: 838 KGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKE-ELKNK 896
GY S++ YAS+S LR +F+ ++ L AKSF P V +G +++ + + +
Sbjct: 528 DGYRSYLHAYASHS--LRTVFDVNKLDLAKVAKSFGFSTPPRVDITVGASMSRDKKTQGR 585
Query: 897 KMAINKEKSFKQRGNFSKKQ 916
+ ++ + + G F KK+
Sbjct: 586 RTYGSQPRQQQGTGGFYKKR 605
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 144 MGFTKMTEIQRRGIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLHALRFKP--RNGTGV 201
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E +++KG+++L+ATPGRLL
Sbjct: 202 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGXNRRAEADKLQKGVNLLIATPGRLL 260
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T
Sbjct: 261 DHLQNTPFV-FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKN--DRQTMLFSATQT 315
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 80/140 (57%), Gaps = 17/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T V+ LA ++L+
Sbjct: 270 FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKN--DRQTMLFSATQTTKVEDLARISLR 327
Query: 252 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
P+ ++ D +H+T ++L+Q +++ R + L SF+ + +
Sbjct: 328 PGPLYVN-VDEEKLHSTV------ENLEQGYVICDADKRFLLLFSFL-------KRNLKK 373
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ + YH ELL+
Sbjct: 374 KVIVFFSSCNSVKYHAELLN 393
>gi|388855550|emb|CCF50773.1| probable HAS1-helicase associated with Set1p [Ustilago hordei]
Length = 571
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 270/484 (55%), Gaps = 58/484 (11%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L + K ++G
Sbjct: 66 ETMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRL--KFKPRNGT 123
Query: 468 YAVIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
A+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VA
Sbjct: 124 GAIIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVA 178
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL Q S+L S
Sbjct: 179 TPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNRQ--SMLFS 236
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T VQ LA ++L+ P+ I+ D+ +T S L+Q ++V R + L
Sbjct: 237 ATQTTKVQDLARISLRPGPLYINV--HADLAASTVS-----RLEQGYVVCESDRRFLLLF 289
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ K++VFM++ + YH++LL+ + ++ LHG Q +RT
Sbjct: 290 TFL-------KKNAGKKIIVFMSSCNSVKYHSDLLNFI---DVPVLDLHGKQKQQKRTNT 339
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F + + SG L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G+ G SLL
Sbjct: 340 FFEYCNAPSGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNAGKSLL 399
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
FL+PSE+ + L+ ++ + E D + N+ +G L +L N
Sbjct: 400 FLLPSELGFLRFLKVAKVPLNEYTFPADKVANV-----QGQLEKLISKNY---------- 444
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
LH SA GY S+++ Y SYS L+ IF+ ++ L AK++ P V
Sbjct: 445 ---------YLHQSARDGYRSYLQAYGSYS--LKRIFDIHKLDLTKVAKAYGFAVPPKVN 493
Query: 882 SGIG 885
IG
Sbjct: 494 ITIG 497
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L + K ++G A
Sbjct: 68 MGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRL--KFKPRNGTGA 125
Query: 61 VIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VATP
Sbjct: 126 IIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVATP 180
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL QS+L SAT
Sbjct: 181 GRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNR--QSMLFSAT 238
Query: 177 LT 178
T
Sbjct: 239 QT 240
>gi|67522985|ref|XP_659553.1| hypothetical protein AN1949.2 [Aspergillus nidulans FGSC A4]
gi|74657502|sp|Q5BBY1.1|HAS1_EMENI RecName: Full=ATP-dependent RNA helicase has1
gi|40745958|gb|EAA65114.1| hypothetical protein AN1949.2 [Aspergillus nidulans FGSC A4]
gi|259487308|tpe|CBF85879.1| TPA: ATP-dependent RNA helicase has1 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BBY1] [Aspergillus
nidulans FGSC A4]
Length = 609
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 283/516 (54%), Gaps = 54/516 (10%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
N PD+P+V L P + P + E G+ + + E M +T +QQ +I P+
Sbjct: 108 NVPDLPSVDAVSL-PQPDG--GPKKFTEL-GLSEKTLQGIKE-MGFETMTEIQQRTIPPL 162
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTLA+ IP I+ L +R K ++G +++ PTRELALQ +
Sbjct: 163 LAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVA 220
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + + GG ++E ++ KG+++L+ATPGRLLDH ++T F ++ L
Sbjct: 221 RELLTAHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTL 279
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 280 VIDEADRILEVGFEDEMRQIIKILPNE--DRQTMLFSATQTTKVEDLARISLRPGPLYIN 337
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D H+T + L +Q +++ R + L SF+ + + K++VF +
Sbjct: 338 V-DHRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFS 383
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + YH ELL+ + ++ LHG Q +RT F F + K GVLICTDVAARGLD
Sbjct: 384 SCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTDVAARGLD 440
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P + DY+HRVGRTAR + G SL+FL PSEV ++ L+ R+ + E
Sbjct: 441 IPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSLMFLQPSEVGFLKYLKEARVPVVE 500
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
+ +++V Q E + Q L+ SA GY S++
Sbjct: 501 FDFP--AKKIVNV---------------------QSQLEKLISQNYYLNKSAKDGYRSYL 537
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ YAS+S LR +F+ ++ L AKSF P +
Sbjct: 538 QAYASHS--LRSVFDVHKLDLVKVAKSFGFSTPPRI 571
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 146 MGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKP--RNGTGV 203
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 204 IVVSPTRELALQIFGVARELLTAHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 262
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 263 DHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNE--DRQTMLFSATQT 318
>gi|66812114|ref|XP_640236.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
gi|74897113|sp|Q54S03.1|DDX18_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx18; AltName:
Full=DEAD box protein 18
gi|60468220|gb|EAL66230.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
Length = 602
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 283/521 (54%), Gaps = 61/521 (11%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
KK++ E M ++T +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ L ++
Sbjct: 131 KKSIEE-MGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVL--VKSNFK 187
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
++G +II PTRELALQ + +L K T + GG K E+ R+ KG+++LV
Sbjct: 188 PRNGTGVIIISPTRELALQIYGVARELMKYHTQ-THGIVIGGASKKPEEERLEKGVNLLV 246
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
ATPGRLLDH ++T+ ++ L++DEADRIL+ G+E E +I+KK Q++L
Sbjct: 247 ATPGRLLDHLQNTKGFITKNLKCLIIDEADRILEVGFEE---EMHQIIKKVPKTRQTMLF 303
Query: 583 SATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 641
SAT T V +A ++L N P+ + D +I + L+Q ++V P + R + L
Sbjct: 304 SATQTRKVDDIAKVSLNNSPVYVGVDDEREISTV-------EGLEQGYVVCPSERRFLLL 356
Query: 642 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTE 701
+F+ ++ K++VF+++ + Y ELL+ + +I +LHG Q +RT
Sbjct: 357 YTFL-------KKNLSKKIIVFLSSCNAVKYTAELLNYI---DIPVLELHGRQKQQKRTN 406
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSS 760
F F + + G+LICTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR VG +G +
Sbjct: 407 TFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGRA 466
Query: 761 LLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
LLFL+P E+ ++ L+ ++ + E + S++A+ +Q
Sbjct: 467 LLFLLPKELGFLKYLKLAKVPLNEYEFPK--------------SKIAN---------VQD 503
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E V Q L+ SA Y +++ YAS+S L+ IF+ + L AK+F D P V
Sbjct: 504 QLEKVVSQNFYLYNSARDAYKAYICAYASHS--LKDIFDVNALDLQCVAKAFGFLDPPKV 561
Query: 881 ISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEF 921
+ N + +K + F++KQ S+F
Sbjct: 562 NLNV----------NSSGKADFQKKSNNKSGFAQKQYGSKF 592
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ L ++ ++G
Sbjct: 137 MGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVL--VKSNFKPRNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L K T + GG K E+ R+ KG+++LVATPGRLL
Sbjct: 195 IIISPTRELALQIYGVARELMKYHTQ-THGIVIGGASKKPEEERLEKGVNLLVATPGRLL 253
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ ++ L++DEADRIL+ G+E E +I+KK Q++L SAT T
Sbjct: 254 DHLQNTKGFITKNLKCLIIDEADRILEVGFEE---EMHQIIKKVPKTRQTMLFSATQT 308
>gi|156377720|ref|XP_001630794.1| predicted protein [Nematostella vectensis]
gi|156217822|gb|EDO38731.1| predicted protein [Nematostella vectensis]
Length = 495
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 288/520 (55%), Gaps = 56/520 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI P+L G D+L ++TGSGKTLA+ +P+++ L +++ K ++G
Sbjct: 19 MGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKT--RNGTGV 76
Query: 470 VIILPTRELALQTLEIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTREL+LQT + L K +FT+ + + GG K+E R++KG+++L+ATPGR
Sbjct: 77 IIISPTRELSLQTYGVARDLLKHHNFTYGI---IMGGVNRKAEAERLQKGVNLLIATPGR 133
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ + ++ LV+DEADRIL+ G+E ++ + + IL ++ Q++L SAT T
Sbjct: 134 LLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKR---QTVLFSATQT 190
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ +P+ + D H T ++ + L+Q +IV P + R + L +F+
Sbjct: 191 KNVEDLAKLSLKRSPLYVGVDD----HKETSTV---EGLEQGYIVVPSEKRFLVLFTFL- 242
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ K++VF ++ + YH+ELL+ + ++ ++HG Q +RT F F
Sbjct: 243 ------KKNRSKKVMVFFSSCNSVKYHSELLNYI---DLPVLEIHGKQKQQKRTTTFFEF 293
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLFL 764
+ KSG+L+CTDVAARGLD+P VDWIVQY +Y+HRVGRTAR G EG +LLFL
Sbjct: 294 CNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTAR-GTEGKGHALLFL 352
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
+P E+ + L++ ++ + E +L+++ + L RL + N
Sbjct: 353 LPEELAFLRYLKHAKVPLNEYDFSSS--KILNIQSQ--LERLIEKNY------------- 395
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI 884
LH SA Y ++++ YAS+ + IFN + L A SF PSV +
Sbjct: 396 ------YLHKSAKDAYKAYIQAYASHQH--KSIFNVNSLDLQRVALSFGFAVPPSVSLNV 447
Query: 885 GKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSG 924
K + + KS Q KQ + F G
Sbjct: 448 HSSKGERIQRRGGGGGFGYKSQNQIAGKHGKQKVFNFKKG 487
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 121/180 (67%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI P+L G D+L ++TGSGKTLA+ +P+++ L +++ K ++G
Sbjct: 19 MGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKT--RNGTGV 76
Query: 61 VIILPTRELALQTLEIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+II PTREL+LQT + L K +FT+ + + GG K+E R++KG+++L+ATPGR
Sbjct: 77 IIISPTRELSLQTYGVARDLLKHHNFTYGI---IMGGVNRKAEAERLQKGVNLLIATPGR 133
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T+ + ++ LV+DEADRIL+ G+E ++ + + IL ++ Q++L SAT T
Sbjct: 134 LLDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKR---QTVLFSATQT 190
>gi|255947238|ref|XP_002564386.1| Pc22g03430 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591403|emb|CAP97631.1| Pc22g03430 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 285/524 (54%), Gaps = 70/524 (13%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNE-------GMNITQVTTVQ 419
N D+P + RL P +E + F + NL+E M T +T +Q
Sbjct: 99 NGTDLPTMEDVRL-PQTEGR-----------LQKFTELNLSEKTMQGINDMGFTTMTEIQ 146
Query: 420 QLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELA 479
Q ++ P+L G DVL ++TGSGKTLA+ +P I+ L +R K ++G +++ PTRELA
Sbjct: 147 QRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHALRFKP--RNGTGVLVVSPTRELA 204
Query: 480 LQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLK 539
LQ + +L + + GG ++E ++ KG+++LVATPGRLLDH ++T+
Sbjct: 205 LQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLMKGVNLLVATPGRLLDHLQNTQGFV 263
Query: 540 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ 599
F ++ LV+DEADRIL+ G+E +I + ++IL + + Q++L SAT T V+ LA ++L+
Sbjct: 264 FKNLKTLVIDEADRILEVGFEDEIRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLR 321
Query: 600 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 658
P+ I+ D + H+T L +Q ++V R + L SF+ + +
Sbjct: 322 PGPLYINV-DHSKEHSTVAGL------EQGYVVCEADKRFLLLFSFL-------KRNLKK 367
Query: 659 KMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTD 718
K++VF ++ YH ELL+ + ++ +LHG Q +RT F F + K G LICTD
Sbjct: 368 KIIVFFSSCSCVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTD 424
Query: 719 VAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLFLIPSEVKLVEELQ 776
VAARGLD+P VDWI+Q+ P DY+HRVGRTAR G EG SL+FL PSEV ++ L+
Sbjct: 425 VAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-GKEGKGRSLMFLQPSEVGFLKHLK 483
Query: 777 NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSA 836
+ R+ + V+ E S++ + +Q E + Q L+ SA
Sbjct: 484 DARVPV--------------VEFEFPASKIVN---------VQSQLEKLIGQNYYLNKSA 520
Query: 837 CKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
GY S+++ YAS+S LR +F+ ++ L AK F P +
Sbjct: 521 KDGYRSYLQAYASHS--LRTVFDVNKLDLVKIAKGFGFNAPPRI 562
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ ++ P+L G DVL ++TGSGKTLA+ +P I+ L +R K ++G
Sbjct: 137 MGFTTMTEIQQRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHALRFKP--RNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 195 LVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLMKGVNLLVATPGRLL 253
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E +I + ++IL + + Q++L SAT T
Sbjct: 254 DHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEIRQIVKILPSE--ERQTMLFSATQT 309
>gi|327306545|ref|XP_003237964.1| DEAD box ATP-dependent RNA helicase [Trichophyton rubrum CBS
118892]
gi|326460962|gb|EGD86415.1| DEAD box ATP-dependent RNA helicase [Trichophyton rubrum CBS
118892]
Length = 565
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 192/567 (33%), Positives = 307/567 (54%), Gaps = 68/567 (11%)
Query: 331 TKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEAL---F 387
T K +K+ +++ D ++ EI + V +G ++ P +P+ T L P EA+ F
Sbjct: 39 TPTKKQKVDQHDDDSEHAEI--ENGVGTG------KDVPALPSADTMAL-PTQEAVSNKF 89
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
+ S E P +K GM T +T +QQ I P L G D+L ++TGSGKTLA+
Sbjct: 90 SDLSLSE-----PTVKAI--SGMGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFL 142
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
IP ++ L+ + K ++G A+II PTRELALQ + +L + + + GG
Sbjct: 143 IPAVEILRSL--KFKPRNGTGALIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANR 199
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
++E ++ KG+++L+ TPGRLLDH + TE F ++ LV+DEADRIL+ G+E ++ + +
Sbjct: 200 RAEAEKLNKGVNVLIGTPGRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQII 259
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLK 626
IL K+ Q++L SAT T V+ LA ++L+ P+ I+ D H+T D + +
Sbjct: 260 SILPKE--DRQTMLFSATQTTKVEDLARISLKPGPLYINV-DHKKEHSTVDGV------E 310
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q FI+ R + L SF+ ++ + K++VF ++ + Y++ELL+ + ++
Sbjct: 311 QGFIICEAHKRFLLLFSFL-------KKNAKKKIIVFFSSCNSVKYYSELLNYI---DLP 360
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG + Q +RT F F + G LICTDVAARGLD+P VD+IVQ P DY+H
Sbjct: 361 VLSLHGKLKQQKRTNTFFEFCNSAQGTLICTDVAARGLDIPAVDYIVQLDPPDDPRDYIH 420
Query: 747 RVGRTARV-GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
RVGRTAR G G SL+FL PSEV + L+ R+ + E + ++++++
Sbjct: 421 RVGRTARGKGKVGRSLMFLQPSEVGFINHLREARVPVVEFEFP--TKHIINI-------- 470
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
Q E + Q L+ SA +GY S++ YAS+S LR +F+ ++ L
Sbjct: 471 -------------QSQLEKLISQNYYLNQSAKEGYRSYLHAYASHS--LRSVFDVNKLDL 515
Query: 866 GHFAKSFALRDAPSVISGIGKPKNKEE 892
AKS+ P V +G ++++
Sbjct: 516 VKVAKSYGFTTPPRVDITLGASMSRDK 542
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G A
Sbjct: 105 MGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTGA 162
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRLL
Sbjct: 163 LIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRLL 221
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K+ Q++L SAT T
Sbjct: 222 DHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKE--DRQTMLFSATQT 277
>gi|310798110|gb|EFQ33003.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 607
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 298/560 (53%), Gaps = 69/560 (12%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQ 419
+ DIPN L PV+ A H F + NL+E M T++T +Q
Sbjct: 107 DGSDIPNRDNLTLPPVAGA-----------EAHDFAQLNLSEKTMTAIKEMGFTKMTEIQ 155
Query: 420 QLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELA 479
+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G +++ PTRELA
Sbjct: 156 RRGIPPLLSGKDVLGAAKTGSGKTLAFLIPAVEMLHALRFKP--RNGTGVIVVSPTRELA 213
Query: 480 LQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLK 539
LQ + +L + + GG ++E +++KG+++L+ATPGRLLDH ++T +
Sbjct: 214 LQIFGVARELMAHHSQTY-GIVIGGANRRAEADKLQKGVNLLIATPGRLLDHLQNTPFV- 271
Query: 540 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ 599
F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T V+ LA ++L+
Sbjct: 272 FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKD--DRQTMLFSATQTTKVEDLARISLR 329
Query: 600 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 658
P+ ++ D H+T ++L +Q +++ R + L SF+ + +
Sbjct: 330 PGPLYVNV-DEQKQHSTVENL------EQGYVICDADKRFLLLFSFL-------KRNLKK 375
Query: 659 KMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTD 718
K++VF ++ + YH ELL+ + ++ LHG Q +RT F F + K G LICTD
Sbjct: 376 KVIVFFSSCNSVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTD 432
Query: 719 VAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQN 777
VAARGLD+P VDWIVQ P DY+HRVGRTAR +G SL+FL PSEV + L+
Sbjct: 433 VAARGLDIPAVDWIVQVDPPDDPRDYIHRVGRTARGANSKGRSLMFLQPSEVGFLTHLKE 492
Query: 778 RRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSAC 837
R+ + V+ + +++A+ +Q E + Q L+ SA
Sbjct: 493 ARVPV--------------VEFDFPANKIAN---------IQSLLEKLISQNYYLNKSAK 529
Query: 838 KGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
GY S++ YAS+S LR +F+ ++ L AKSF P V +G ++++ +
Sbjct: 530 DGYRSYLHAYASHS--LRTVFDVNKLDLAKVAKSFGFPTPPRVDITVGASMSRDKKTQGR 587
Query: 898 MAINKE-KSFKQRGNFSKKQ 916
A + + G F KK+
Sbjct: 588 RAYGSQPRQEHGTGGFYKKR 607
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 130/221 (58%), Gaps = 22/221 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 146 MGFTKMTEIQRRGIPPLLSGKDVLGAAKTGSGKTLAFLIPAVEMLHALRFKP--RNGTGV 203
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E +++KG+++L+ATPGRLL
Sbjct: 204 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEADKLQKGVNLLIATPGRLL 262
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT
Sbjct: 263 DHLQNTPFV-FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKD--DRQTMLFSATQTTK 319
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E + S VE+L V+ +AD+
Sbjct: 320 VEDLARISLRPGPLYVNVDEQKQHSTVENLEQGYVICDADK 360
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 79/140 (56%), Gaps = 17/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T V+ LA ++L+
Sbjct: 272 FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKD--DRQTMLFSATQTTKVEDLARISLR 329
Query: 252 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
P+ ++ D H+T ++L+Q +++ R + L SF+ + +
Sbjct: 330 PGPLYVN-VDEQKQHSTV------ENLEQGYVICDADKRFLLLFSFL-------KRNLKK 375
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ + YH ELL+
Sbjct: 376 KVIVFFSSCNSVKYHAELLN 395
>gi|146323887|ref|XP_751498.2| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|91206842|sp|Q4WQM4.2|HAS1_ASPFU RecName: Full=ATP-dependent RNA helicase has1
gi|129557486|gb|EAL89460.2| ATP-dependent RNA helicase, putative [Aspergillus fumigatus Af293]
gi|159125568|gb|EDP50685.1| ATP-dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 622
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 286/513 (55%), Gaps = 54/513 (10%)
Query: 370 DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
D+P+ T L P E P + E G+ K +N+ M +T +Q+ +I P+L G
Sbjct: 123 DLPSAGTLSL-PTVEG--EPQKFTEL-GLSEKTLKAIND-MGFETMTEIQRRTIPPLLAG 177
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ + +L
Sbjct: 178 RDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVAREL 235
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
C+ + + GG ++E ++ KG+++L+ATPGRLLDH ++T+ F ++ LV+D
Sbjct: 236 CQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVID 294
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAAD 608
EADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+ D
Sbjct: 295 EADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYINV-D 351
Query: 609 STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
H+T + L +Q +++ R + L SF+ + + K++VF ++ +
Sbjct: 352 HRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFSSCN 398
Query: 669 MADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD+P
Sbjct: 399 CVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPA 455
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
VDWI+Q+ P DY+HRVGRTAR +G SL+FL PSEV ++ L+ R+ +
Sbjct: 456 VDWIIQFDPPDDPRDYIHRVGRTARGTNAKGRSLMFLQPSEVGFLKHLKEARVPV----- 510
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
V+ E +++ + +Q E + Q L+ SA +GY S+++ Y
Sbjct: 511 ---------VEFEFPANKIVN---------VQSQLEKLIGQNYYLNKSAKEGYRSYLQAY 552
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
AS+S LR +F+ ++ L AK F P +
Sbjct: 553 ASHS--LRSVFDVHKLDLVKVAKGFGFSTPPRI 583
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 158 MGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 215
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +LC+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 216 IVVSPTRELALQIFGVARELCQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLL 274
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 275 DHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 330
>gi|346973441|gb|EGY16893.1| ATP-dependent RNA helicase DBP7 [Verticillium dahliae VdLs.17]
Length = 778
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 210/641 (32%), Positives = 320/641 (49%), Gaps = 91/641 (14%)
Query: 362 SSLFQNNPDIPNV---PTRRLKPVSEAL---FAPTSYEEFP----GIHPFMKKNLNEGMN 411
S LF +NP V P+ KP +E AP S E GI + ++L+ +
Sbjct: 128 SKLFTSNPMARTVFDDPSAESKPDAEPAQPSNAPLSEEAASFHALGISRRLAQDLSGKVK 187
Query: 412 ITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIY 468
+ T +Q I Q I + D V++QTGSGKTLAY +PI+Q++ + K+ R G++
Sbjct: 188 LKAPTAIQAKVIPQLIKEDSDAFVQAQTGSGKTLAYLLPILQRILAVADEGKVRRDSGLF 247
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+++ PTREL Q + +L W+V + + GGE SEK+R+RKG++IL+ATPGRL
Sbjct: 248 AMVLAPTRELCRQIDLVLQQLLPQ--WLVSTTVIGGESKHSEKSRLRKGVNILIATPGRL 305
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF------------------LEIL 570
DH +T+ L V LVLDE DR+++ G+E D+ E LE+L
Sbjct: 306 TDHLANTKALDVGSVRWLVLDEGDRLMEMGFEDDLREIVGKIRAGDLSNRTKDGVSLELL 365
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTD----------SLV 620
K++ ++L SAT+ VQRL ++L++ + I A D ++ N +
Sbjct: 366 PKRR---VTVLCSATMKMDVQRLGEISLEDAVHITAED--EVVNGEGEEQQQQQQPVAFS 420
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL---- 676
P LKQ + P KLRLV+L + + K K +VFM+ D DYH +L
Sbjct: 421 APAQLKQAHYIVPAKLRLVSLIALL--KSTFARRGSVMKAIVFMSCADSVDYHFDLLKEP 478
Query: 677 ----------------------LSTVLGENIAFFKLHGSMSQSERTEVFKTFRS-VKSGV 713
L++ NI KLHGS+ Q RT + + + V
Sbjct: 479 PKADRKTESTAVTANTVAPAAYLASPANPNIVLHKLHGSLPQPVRTGTLAAYSTCTEPCV 538
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLV 772
LI TD+A+RGLD+P V+ +++Y S+ D+VHR+GRTAR G G ++LFL P E V
Sbjct: 539 LITTDIASRGLDVPSVELVIEYDPAFSAADHVHRIGRTARAGRPGKAVLFLQPGCEEGYV 598
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA------ATALQMSFESAV 826
+ L + + L L+ M + A E + A ALQ+ E +
Sbjct: 599 DYLTTATSVPKAESFEGVLHRGLATHMPFPVDTDAKPPPEDSRSFSQRAEALQLHIEQRL 658
Query: 827 L--QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI 884
L L +A KG+ S VR YA+++K+ R F+ ++HLGH AKS+ LR+AP G+
Sbjct: 659 LIPSGAALLEAARKGFRSHVRAYATHTKEERKFFDITELHLGHTAKSYGLREAP---QGV 715
Query: 885 GKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGL 925
G+ + + K A +K++ KQ S ++ L + D+ L
Sbjct: 716 GRGGHDGKKTAMKAAASKKR--KQGAGDSARESLFDADTDL 754
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 64/338 (18%)
Query: 15 QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVIILPTRELALQ 72
Q I + D V++QTGSGKTLAY +PI+Q++ + K+ R G++A+++ PTREL Q
Sbjct: 201 QLIKEDSDAFVQAQTGSGKTLAYLLPILQRILAVADEGKVRRDSGLFAMVLAPTRELCRQ 260
Query: 73 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 132
+ +L W+V + + GGE SEK+R+RKG++IL+ATPGRL DH +T+ L
Sbjct: 261 IDLVLQQLLPQ--WLVSTTVIGGESKHSEKSRLRKGVNILIATPGRLTDHLANTKALDVG 318
Query: 133 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKF 192
V LVLDE DR+++ G+E D+ E + ++
Sbjct: 319 SVRWLVLDEGDRLMEMGFEDDLREIVGKIRAG---------------------------- 350
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
D ++R D LE+L K++ +VL SAT+ VQRL ++L++
Sbjct: 351 --------DLSNRTKD-------GVSLELLPKRR---VTVLCSATMKMDVQRLGEISLED 392
Query: 253 PIQIDAADSTDIHNTTD----------SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
+ I A D ++ N + P LKQ + P KLRLV+L + + K
Sbjct: 393 AVHITAED--EVVNGEGEEQQQQQQPVAFSAPAQLKQAHYIVPAKLRLVSLIALL--KST 448
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKE 340
K +VFM+ D DYH +LL K + E
Sbjct: 449 FARRGSVMKAIVFMSCADSVDYHFDLLKEPPKADRKTE 486
>gi|119499912|ref|XP_001266713.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143019652|sp|A1CW14.1|HAS1_NEOFI RecName: Full=ATP-dependent RNA helicase has1
gi|119414878|gb|EAW24816.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 622
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 287/513 (55%), Gaps = 54/513 (10%)
Query: 370 DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
D+P+ RL P E P + E G+ K +N+ M +T +Q+ +I P+L G
Sbjct: 123 DLPSADALRL-PTVEG--EPQKFTEL-GLTEKTLKAIND-MGFDTMTEIQRRTIPPLLAG 177
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ + +L
Sbjct: 178 RDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVAREL 235
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
C+ + + GG ++E ++ KG+++L+ATPGRLLDH ++T+ F ++ LV+D
Sbjct: 236 CQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFIFKNLKTLVID 294
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAAD 608
EADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+ D
Sbjct: 295 EADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYINV-D 351
Query: 609 STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
H+T + L +Q +++ R + L SF+ + + K++VF ++ +
Sbjct: 352 HRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFSSCN 398
Query: 669 MADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD+P
Sbjct: 399 CVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPA 455
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PSEV ++ L+ R+ +
Sbjct: 456 VDWIIQFDPPDDPRDYIHRVGRTARGANAKGRSLMFLQPSEVGFLKHLKEARVPV----- 510
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
V+ E +++ + +Q E + Q L+ SA +GY S+++ Y
Sbjct: 511 ---------VEFEFPANKIVN---------VQSQLEKLIGQNYYLNKSAKEGYRSYLQAY 552
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
AS+S LR +F+ ++ L AK F P +
Sbjct: 553 ASHS--LRSVFDVHKLDLVKVAKGFGFSTPPRI 583
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 158 MGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 215
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +LC+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 216 IVVSPTRELALQIFGVARELCQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLL 274
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 275 DHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 330
>gi|302900629|ref|XP_003048299.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729232|gb|EEU42586.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 590
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 288/547 (52%), Gaps = 55/547 (10%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
N D+P+ L PV+ A S+EE MK + E M T++T +Q+ I P
Sbjct: 93 GNTDLPDGGQLTLPPVAGA--EAQSFEELKLSDKTMKA-IKE-MGFTKMTEIQRRGIPPS 148
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTLA+ IP+++ L +R K ++G +++ PTRELALQ +
Sbjct: 149 LAGRDVLGAAKTGSGKTLAFLIPVVEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVA 206
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + GG ++E ++ KG+++++ATPGRLLDH ++T + F ++ L
Sbjct: 207 RELMAHHSQTY-GIVIGGANRRAEAEKLSKGVNLIIATPGRLLDHLQNTPFV-FKNLKSL 264
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 265 VIDEADRILEIGFEDEMRQIIKILPKE--DRQTMLFSATQTTKVEDLARISLRPGPLYIN 322
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
+ + L+Q +++ R + L SF+ + + K++VF +
Sbjct: 323 VDEEKQFSTV-------EGLEQGYVICEADRRFLLLFSFL-------KRNIKKKVIVFFS 368
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ YH ELL+ + ++ LHG Q +RT F F + K G LICTDVAARGLD
Sbjct: 369 SCACVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLD 425
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL PSEV + L+ R+ + E
Sbjct: 426 IPAVDWIVQFDPPDDPRDYIHRVGRTARGSNSKGRSLMFLQPSEVGFLSHLKAARVPVVE 485
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
+QN +Q E + Q L+ SA GY S++
Sbjct: 486 FDFPKKIQN------------------------VQSQLEKLISQNYYLNKSAKDGYRSYL 521
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEK 904
YAS+S LR +F+ ++ L AKSF P V +G ++++ + A +
Sbjct: 522 HAYASHS--LRSVFDINKLDLTKVAKSFGFSVPPRVEITLGASMSRDKKNQGRRAYGSQP 579
Query: 905 SFKQRGN 911
RG
Sbjct: 580 RQGGRGG 586
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 130/221 (58%), Gaps = 22/221 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P L G DVL ++TGSGKTLA+ IP+++ L +R K ++G
Sbjct: 132 MGFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVVEMLSALRFKP--RNGTGV 189
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++++ATPGRLL
Sbjct: 190 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLSKGVNLIIATPGRLL 248
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 249 DHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKILPKE--DRQTMLFSATQTTK 305
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E +FS VE L V+ EADR
Sbjct: 306 VEDLARISLRPGPLYINVDEEKQFSTVEGLEQGYVICEADR 346
>gi|315047684|ref|XP_003173217.1| ATP-dependent RNA helicase has1 [Arthroderma gypseum CBS 118893]
gi|311343603|gb|EFR02806.1| ATP-dependent RNA helicase has1 [Arthroderma gypseum CBS 118893]
Length = 567
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 270/486 (55%), Gaps = 49/486 (10%)
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
GM T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 105 GMGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTG 162
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRL
Sbjct: 163 ALIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRL 221
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SAT T
Sbjct: 222 LDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSATQTT 279
Query: 589 AVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++L+ P+ I+ D H+T D + +Q FI+ R + L SF+
Sbjct: 280 KVEDLARISLKPGPLYINV-DHKKEHSTVDGV------EQGFIICEAHKRFLLLFSFL-- 330
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ + Y++ELL+ + ++ LHG + Q +RT F F
Sbjct: 331 -----KKNAKKKIIVFFSSCNSVKYYSELLNYI---DLPVLSLHGKLKQQKRTNTFFEFC 382
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIP 766
+ G LICTDVAARGLD+P VD+IVQ P DY+HRVGRTAR G G SL+FL P
Sbjct: 383 NSAQGTLICTDVAARGLDIPAVDYIVQLDPPDDPRDYIHRVGRTARGKGKVGRSLMFLQP 442
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
SEV + L+ R+ + E + ++++++ Q E +
Sbjct: 443 SEVGFINHLREARVPVVEFEFP--TKHIINI---------------------QSQLEKLI 479
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
Q L+ SA +GY S++ YAS+S LR +F+ ++ L AKS+ P V +G
Sbjct: 480 SQNYYLNQSAKEGYRSYLHAYASHS--LRSVFDVNKLDLVKVAKSYGFTTPPRVDIALGA 537
Query: 887 PKNKEE 892
++++
Sbjct: 538 SMSRDK 543
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G A
Sbjct: 106 MGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTGA 163
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRLL
Sbjct: 164 LIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRLL 222
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SAT T
Sbjct: 223 DHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSATQT 278
>gi|189193121|ref|XP_001932899.1| ATP-dependent RNA helicase HAS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978463|gb|EDU45089.1| ATP-dependent RNA helicase HAS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 606
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 280/502 (55%), Gaps = 59/502 (11%)
Query: 390 TSYEEFPGIHP--FMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
TS P +P F + NL+E GM +T +QQ +I P+L G DVL ++TGS
Sbjct: 116 TSGTTMPMANPTEFAELNLSERTRQAIDGMGFKTMTEIQQKAIPPLLAGRDVLGAAKTGS 175
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLA+ IP I+ L ++R K ++G +++ PTRELALQ + +L + +
Sbjct: 176 GKTLAFLIPAIEMLSQLRFK--PRNGTGVIVVSPTRELALQIFGVARELMEHHSQTF-GI 232
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
GG +E ++RKG+++L+ATPGRLLDH +T+ F + LV+DEADRIL+ G+E
Sbjct: 233 CIGGANRSAEADKLRKGVNLLIATPGRLLDHLHNTQGFVFKNLRSLVIDEADRILEVGFE 292
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSL 619
++ ++IL ++ Q++L SAT T V+ LA ++L+ P+ I+ D H+T L
Sbjct: 293 DEMRSIIKILPTER---QTMLFSATQTTKVEDLARISLKAGPLYINV-DHRAEHSTVQGL 348
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 679
+Q +++ R L SF+ + ++ K++VF+++ D+++ELL+
Sbjct: 349 ------EQGYVLCDSDTRFRLLFSFL-------KKHQKKKVIVFLSSCASVDFYSELLNY 395
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPS 739
+ ++ LHG + Q RT F F + +SG LICTDVAARGLD+P VDW++Q+ P
Sbjct: 396 I---DLPVLGLHGKLKQQARTNRFFEFVNAQSGTLICTDVAARGLDIPEVDWVIQFDPPD 452
Query: 740 SSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
DY+HRVGRTAR + +G SL+FL+PSEV ++ L+ R+ + E +L +L++
Sbjct: 453 DPRDYIHRVGRTARGANGKGRSLMFLLPSEVGFLKLLKESRVPLVEFELP--ANKILNI- 509
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
Q E+ + + L+ SA GY S+++ YAS+S LR +F
Sbjct: 510 --------------------QSQLEALISKNYYLNKSAKDGYRSYLQSYASHS--LRSVF 547
Query: 859 NFKQIHLGHFAKSFALRDAPSV 880
+ ++ L AKSF P +
Sbjct: 548 DVNKLDLVKVAKSFGFSTPPRI 569
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L ++R K ++G
Sbjct: 145 MGFKTMTEIQQKAIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSQLRFK--PRNGTGV 202
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG +E ++RKG+++L+ATPGRLL
Sbjct: 203 IVVSPTRELALQIFGVARELMEHHSQTF-GICIGGANRSAEADKLRKGVNLLIATPGRLL 261
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +T+ F + LV+DEADRIL+ G+E ++ ++IL ++ Q++L SAT T
Sbjct: 262 DHLHNTQGFVFKNLRSLVIDEADRILEVGFEDEMRSIIKILPTER---QTMLFSATQT 316
>gi|449439479|ref|XP_004137513.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
sativus]
Length = 608
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 273/513 (53%), Gaps = 51/513 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I P L G DVL ++TGSGKTLA+ IP ++ LQ R + +G
Sbjct: 139 MGFEHMTQIQDRAIPPFLAGKDVLGAARTGSGKTLAFLIPAVELLQ--RISFTPYNGTGV 196
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+Q E+ +L K + + +TGG ++E I +G+++L+ATPGRLL
Sbjct: 197 IVICPTRELAIQIHEVANELLKYHSQTL-GIVTGGSSRQAEANHITRGVNLLIATPGRLL 255
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +HT+ F ++ L++DEADRIL+ +E ++ + +++L K + Q+ L SAT T
Sbjct: 256 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIIKLLPKNR---QTALFSATQTQK 312
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ L ++ Q+ P+ ID D + V + L+Q + V P R + L SF+
Sbjct: 313 VEDLVRLSFQSTPVYIDVDDGR-------TKVTNEGLQQGYCVVPSAKRFIVLYSFL--- 362
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
K++VF ++ + +H +LL + I +HG Q +RT F F
Sbjct: 363 ----KRSLSKKVMVFFSSCNSVTFHADLLRHI---KIDCMDIHGKQKQQKRTSTFFAFNK 415
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 416 AEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPE 475
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E + D RLA+ +Q E V
Sbjct: 476 ELQFLRYLKAAKVPVKEYEFSD--------------KRLAN---------VQSHLEKLVG 512
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ +A Y +++ Y S+S ++ IFN ++ L A SF + P V I
Sbjct: 513 SNYHLNKAAKDAYRTYLLAYNSHS--MKDIFNVHRLDLQAIAASFCFSNPPKVNLNIDSS 570
Query: 888 KNKEELKNKKMAINKEKSFKQRGNFSKKQMLSE 920
+K K +K+ ++ + F + + KK E
Sbjct: 571 ASKLRKKTRKVEGSRNR-FSESNPYGKKNAEDE 602
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 154/329 (46%), Gaps = 80/329 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P L G DVL ++TGSGKTLA+ IP ++ LQ R + +G
Sbjct: 139 MGFEHMTQIQDRAIPPFLAGKDVLGAARTGSGKTLAFLIPAVELLQ--RISFTPYNGTGV 196
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+Q E+ +L K + + +TGG ++E I +G+++L+ATPGRLL
Sbjct: 197 IVICPTRELAIQIHEVANELLKYHSQTL-GIVTGGSSRQAEANHITRGVNLLIATPGRLL 255
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +HT+ F ++ L++DEADRIL+ +E ++ + +++L K + Q+ L SAT T
Sbjct: 256 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIIKLLPKNR---QTALFSATQT-- 310
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
KVE LV + FQS
Sbjct: 311 ------------QKVEDLV--------------------------RLSFQST-------- 324
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ ID D + V + L+Q + V P R + L SF+
Sbjct: 325 ------------PVYIDVDDGR-------TKVTNEGLQQGYCVVPSAKRFIVLYSFL--- 362
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
K++VF ++ + +H +LL
Sbjct: 363 ----KRSLSKKVMVFFSSCNSVTFHADLL 387
>gi|328848641|gb|EGF97845.1| hypothetical protein MELLADRAFT_46164 [Melampsora larici-populina
98AG31]
Length = 659
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 183/512 (35%), Positives = 281/512 (54%), Gaps = 59/512 (11%)
Query: 391 SYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
S + P + F NL+ G M +T VQ +I P++ G DVL ++TGSGKT
Sbjct: 119 SASDKPLVTEFTSLNLSPGTAKAIEEMGFKHMTEVQARTIPPLMTGRDVLGAARTGSGKT 178
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+ +P ++ L ++ K ++G A+I+ PTRELALQ + +L K + + G
Sbjct: 179 LAFLVPAVEMLSRLQFKP--RNGTGAIIVSPTRELALQIFGVAQELMKHHSQTF-AITIG 235
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G K+E ++ KG+++L++TPGRLLDH ++T+ FS ++ L++DEADRIL+ G+E ++
Sbjct: 236 GANRKAEAEKLIKGVNLLISTPGRLLDHLQNTKGFVFSNLKALIIDEADRILEIGFEDEM 295
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NP--IQIDAADSTDIHNTTDSLV 620
+ + +L + QS+L SAT T VQ LA ++L+ P I +DA N D+ V
Sbjct: 296 RKIISLLPSE--NRQSMLFSATQTTKVQDLARISLRPGPLYINVDA-------NKQDATV 346
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
L+Q ++V + R + L +F L K N K++VF ++ + YH ELL+ +
Sbjct: 347 --QGLEQGYVVCESEKRFLLLFTF-LKKSLN------KKVIVFFSSCNSVKYHGELLNYI 397
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
+I LHG Q +RT F F + +G+L+CTDVAARGLD+P VDWI+Q+ P
Sbjct: 398 ---DIPALDLHGKQKQQKRTNTFFEFCNAPTGILLCTDVAARGLDIPKVDWIIQFDPPDD 454
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKME 800
DY+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E
Sbjct: 455 PRDYIHRVGRTARAGKSGRSLLFLLPSELGFLRFLKLAKVPLNEYSFP------------ 502
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
+LA NV+T T L + + L+ SA G+ S+++ YASYS L+ IFN
Sbjct: 503 --TDKLA--NVQTQLTKL-------ISKNYYLNQSARDGFRSYIQSYASYS--LKKIFNV 549
Query: 861 KQIHLGHFAKSFALRDAPSVISGIGKPKNKEE 892
+ L ++F P+V I KN ++
Sbjct: 550 NSLDLNKVGQAFGFTVPPAVNIPISALKNSDK 581
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P++ G DVL ++TGSGKTLA+ +P ++ L ++ K ++G A
Sbjct: 145 MGFKHMTEVQARTIPPLMTGRDVLGAARTGSGKTLAFLVPAVEMLSRLQFKP--RNGTGA 202
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L K + + GG K+E ++ KG+++L++TPGRLL
Sbjct: 203 IIVSPTRELALQIFGVAQELMKHHSQTF-AITIGGANRKAEAEKLIKGVNLLISTPGRLL 261
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ FS ++ L++DEADRIL+ G+E ++ + + +L + QS+L SAT T
Sbjct: 262 DHLQNTKGFVFSNLKALIIDEADRILEIGFEDEMRKIISLLPSE--NRQSMLFSATQT 317
>gi|452820979|gb|EME28015.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 460
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 262/471 (55%), Gaps = 50/471 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M+ T +T VQ + L G DVL ++TGSGKTLA+ IPI++ L ++ K K G
Sbjct: 34 EEMHFTYMTEVQARCLPHALGGRDVLGAARTGSGKTLAFLIPIVELLSKV--KWPNKMGT 91
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
AVII PTREL LQT + ++LC + GG K E ++ KG +I+VATPGR
Sbjct: 92 AAVIIAPTRELVLQTHNVLSELCSHHPH-SHCVVMGGSNRKVEVEKLTKGTTIIVATPGR 150
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T F ++ LV+DEADR LD G+E ++ E L IL K + Q++L SAT T
Sbjct: 151 LLDHLQNTRGFLFKNLQVLVIDEADRCLDIGFEEEMHEILRILPKDR---QTLLFSATQT 207
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ L ++ +N PI + D + + L+Q F+V ++R L +F+
Sbjct: 208 TRVEDLIKVSFKNKPIYVGVDDKRETATVS-------GLEQGFLVCSAEVRFQTLFTFL- 259
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ + K++VF ++ ++ ++ ELL+ + +I +LHG Q +RT F F
Sbjct: 260 ------KRNSKKKIIVFFSSCNVVKFYAELLNFI---DIPVLELHGRQKQQKRTNTFFEF 310
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+S +L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR V +G +LLFL+
Sbjct: 311 CKAQSAILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVDGKGRALLFLL 370
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSE + L+ ++ + E ++ S+LA+ +Q ES
Sbjct: 371 PSEKGFLHYLRQAKVPLHEYEIAT--------------SKLAN---------IQSQLESL 407
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+ + LH SA + Y S++ YAS+ ++HIFN + + L AKSF + D
Sbjct: 408 IAKNYYLHKSAKEAYRSYLLAYASHH--MKHIFNMEALDLKAVAKSFVILD 456
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+ T +T VQ + L G DVL ++TGSGKTLA+ IPI++ L ++ K K G A
Sbjct: 36 MHFTYMTEVQARCLPHALGGRDVLGAARTGSGKTLAFLIPIVELLSKV--KWPNKMGTAA 93
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VII PTREL LQT + ++LC + GG K E ++ KG +I+VATPGRLL
Sbjct: 94 VIIAPTRELVLQTHNVLSELCSHHPH-SHCVVMGGSNRKVEVEKLTKGTTIIVATPGRLL 152
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADR LD G+E ++ E L IL K + Q++L SAT T
Sbjct: 153 DHLQNTRGFLFKNLQVLVIDEADRCLDIGFEEEMHEILRILPKDR---QTLLFSATQT 207
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T F ++ LV+DEADR LD G+E ++ E L IL K + Q++L SAT T V+
Sbjct: 156 QNTRGFLFKNLQVLVIDEADRCLDIGFEEEMHEILRILPKDR---QTLLFSATQTTRVED 212
Query: 245 LAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
L ++ +N PI + D + + L+Q F+V ++R L +F+
Sbjct: 213 LIKVSFKNKPIYVGVDDKRETATVS-------GLEQGFLVCSAEVRFQTLFTFL------ 259
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
+ + K++VF ++ ++ ++ ELL+
Sbjct: 260 -KRNSKKKIIVFFSSCNVVKFYAELLN 285
>gi|350412881|ref|XP_003489799.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Bombus impatiens]
Length = 578
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 273/505 (54%), Gaps = 51/505 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 123 MGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGC 180
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + + L GG ++E ++ KGI+I+VATPGRLL
Sbjct: 181 IIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGANRQTEAQKLAKGINIIVATPGRLL 239
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ ++L SAT T
Sbjct: 240 DHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKR---LTMLFSATQTKR 296
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L+ P+ + D + + L+Q ++V P + R + L +F+
Sbjct: 297 TEMLTTLALKKEPVYVGVDDDKEKATV-------EGLEQGYVVCPSEKRFLLLFTFL--- 346
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 347 ----KKNRKKKVMVFFSSCMSVKYHHELLNYI---DLPVLSIHGKQKQTKRTTTFFQFCN 399
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 400 ASSGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 459
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ R+ + E +++AD +Q+ E V
Sbjct: 460 ELGFLRYLKQARVPVNEFDF--------------SWNKIAD---------IQLQLEKLVS 496
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + ++VR Y S+ L+ IF+ + + L AKSF P+V +G
Sbjct: 497 KNYFLNMSAKEAFKAYVRAYDSHH--LKQIFDIETVDLSKVAKSFGFVVPPAVDLKVGIS 554
Query: 888 KNKEELKNKKMAINKEKSFKQRGNF 912
KN K K FK R NF
Sbjct: 555 KNSRPRKKLGGGYGYSK-FKSRSNF 578
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 143/248 (57%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 123 MGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGC 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + + L GG ++E ++ KGI+I+VATPGRLL
Sbjct: 181 IIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGANRQTEAQKLAKGINIIVATPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ ++L SAT T
Sbjct: 240 DHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKR---LTMLFSATQTKR 296
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
T T LK V V D+ ++ L+QGY E+ LKK + +
Sbjct: 297 TEMLT-TLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVM 355
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 356 VFFSSCMS 363
>gi|449524338|ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
sativus]
Length = 579
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/513 (33%), Positives = 273/513 (53%), Gaps = 51/513 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I P L G DVL ++TGSGKTLA+ IP ++ LQ R + +G
Sbjct: 110 MGFEHMTQIQDRAIPPFLAGKDVLGAARTGSGKTLAFLIPAVELLQ--RISFTPYNGTGV 167
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+Q E+ +L K + + +TGG ++E I +G+++L+ATPGRLL
Sbjct: 168 IVICPTRELAIQIHEVANELLKYHSQTL-GIVTGGSSRQAEANHITRGVNLLIATPGRLL 226
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +HT+ F ++ L++DEADRIL+ +E ++ + +++L K + Q+ L SAT T
Sbjct: 227 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIIKLLPKNR---QTALFSATQTQK 283
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ L ++ Q+ P+ ID D + V + L+Q + V P R + L SF+
Sbjct: 284 VEDLVRLSFQSTPVYIDVDDGR-------TKVTNEGLQQGYCVVPSAKRFIVLYSFL--- 333
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
K++VF ++ + +H +LL + I +HG Q +RT F F
Sbjct: 334 ----KRSLSKKVMVFFSSCNSVTFHADLLRHI---KIDCMDIHGKQKQQKRTSTFFAFNK 386
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 387 AEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNALLFLIPE 446
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E + D RLA+ +Q E V
Sbjct: 447 ELQFLRYLKAAKVPVKEYEFSD--------------KRLAN---------VQSHLEKLVG 483
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ +A Y +++ Y S+S ++ IFN ++ L A SF + P V I
Sbjct: 484 SNYHLNKAAKDAYRTYLLAYNSHS--MKDIFNVHRLDLQAIAASFCFSNPPKVNLNIDSS 541
Query: 888 KNKEELKNKKMAINKEKSFKQRGNFSKKQMLSE 920
+K K +K+ ++ + F + + KK E
Sbjct: 542 ASKLRKKTRKVEGSRNR-FSESNPYGKKNAEDE 573
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 154/329 (46%), Gaps = 80/329 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P L G DVL ++TGSGKTLA+ IP ++ LQ R + +G
Sbjct: 110 MGFEHMTQIQDRAIPPFLAGKDVLGAARTGSGKTLAFLIPAVELLQ--RISFTPYNGTGV 167
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+Q E+ +L K + + +TGG ++E I +G+++L+ATPGRLL
Sbjct: 168 IVICPTRELAIQIHEVANELLKYHSQTL-GIVTGGSSRQAEANHITRGVNLLIATPGRLL 226
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +HT+ F ++ L++DEADRIL+ +E ++ + +++L K + Q+ L SAT T
Sbjct: 227 DHLQHTKNFVFKNLKCLIIDEADRILETNFEEEMKQIIKLLPKNR---QTALFSATQT-- 281
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
KVE LV + FQS
Sbjct: 282 ------------QKVEDLV--------------------------RLSFQST-------- 295
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ ID D + V + L+Q + V P R + L SF+
Sbjct: 296 ------------PVYIDVDDGR-------TKVTNEGLQQGYCVVPSAKRFIVLYSFL--- 333
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
K++VF ++ + +H +LL
Sbjct: 334 ----KRSLSKKVMVFFSSCNSVTFHADLL 358
>gi|448532819|ref|XP_003870508.1| Has1 protein [Candida orthopsilosis Co 90-125]
gi|380354863|emb|CCG24379.1| Has1 protein [Candida orthopsilosis]
Length = 573
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/515 (35%), Positives = 286/515 (55%), Gaps = 51/515 (9%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
S+E+ P MK + E M ++T VQ +I P+L G DVL ++TGSGKTLA+ IP
Sbjct: 108 SFEKAEFSEPTMKA-IRE-MGFKKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA 165
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
I+ L + KI ++G +II PTRELALQ + +L + + + GG + E
Sbjct: 166 IELLYSL--KIKPRNGTAVIIITPTRELALQIFGVARQLMEHHSQTC-GIVIGGADRRQE 222
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
++ KG+++LVATPGRLLDH K+T+ FS ++ L++DEADRIL+ G+E ++ + ++IL
Sbjct: 223 ATKLAKGVNLLVATPGRLLDHLKNTQGFVFSNLKALIIDEADRILEIGFEEEMKQIIKIL 282
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHF 629
+ Q++L SAT T V+ LA ++L+ P+ I+ D+ D L+Q +
Sbjct: 283 PNE--DRQTMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTA-------DGLEQGY 333
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
+V R + L SF+ +NV + K++VF+++ + +++ELL+ + ++
Sbjct: 334 VVCDSDKRFLLLFSFL---KRNVKK----KIIVFLSSCNSVKFYSELLNYI---DLPVLD 383
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q +RT F F + K G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVG
Sbjct: 384 LHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVG 443
Query: 750 RTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD 808
RTAR +G SL+FL PSE+ + L+ + + E E +++A
Sbjct: 444 RTARGTQGKGKSLMFLTPSELGFLRYLKAANVPLNE--------------YEFPTNKIA- 488
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
NV++ T L + +LH SA GY ++++ YAS+S L+ ++ ++ L
Sbjct: 489 -NVQSQLTKL-------IKTNYLLHQSAKDGYRAYLQAYASHS--LKTVYQIDKLDLVKV 538
Query: 869 AKSFALRDAPSVISGIGKPKNKEELKNKKMAINKE 903
KSF P V IG E K+KK +K+
Sbjct: 539 GKSFGFDVPPKVNITIGASGKSIEKKHKKQRRDKK 573
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 125 MGFKKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 182
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG + E ++ KG+++LVATPGRLL
Sbjct: 183 IIITPTRELALQIFGVARQLMEHHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLL 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ FS ++ L++DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 242 DHLKNTQGFVFSNLKALIIDEADRILEIGFEEEMKQIIKILPNE--DRQTMLFSATQT 297
>gi|334329846|ref|XP_001363225.2| PREDICTED: ATP-dependent RNA helicase DDX18 [Monodelphis domestica]
Length = 642
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 267/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 168 MGFTNMTEIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKL--KFMPRNGTGV 225
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 226 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 282
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T F ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 LLDHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 339
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D D L+Q ++V P + R + L +F+
Sbjct: 340 RKVEDLAKISLKKEPLYVGVDDDKDTATV-------DGLEQGYVVCPSEKRFLLLFTFL- 391
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 392 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVMAIHGKQKQNKRTTTFFQF 442
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 443 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILR 502
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 503 PEELGFLRYLKQAKVPLSEF--------------EFSWSKISD---------IQAQLEKL 539
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S+VR Y S+S L+ I+N ++L A SF + P V
Sbjct: 540 IEKNYFLHKSAQEAYKSYVRAYDSHS--LKQIYNVNSLNLPLVALSFGFKVPPFV 592
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 118/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 168 MGFTNMTEIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVKL--KFMPRNGTGV 225
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 226 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 282
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T F ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 LLDHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 339
>gi|367016289|ref|XP_003682643.1| hypothetical protein TDEL_0G00650 [Torulaspora delbrueckii]
gi|359750306|emb|CCE93432.1| hypothetical protein TDEL_0G00650 [Torulaspora delbrueckii]
Length = 485
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 283/514 (55%), Gaps = 54/514 (10%)
Query: 393 EEFPGIH---PFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
EEF G++ MK E M + +T VQ +I P+L G DVL ++TGSGKTLA+ IP
Sbjct: 21 EEFSGLNLSDATMKAV--EKMGFSSMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIP 78
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++L + K ++G ++I PTRELALQ + +L + F + GG +
Sbjct: 79 AIERLHSL--KFKPRNGTGVIVITPTRELALQIFGVARELME-FHSQTYGIVIGGANRRQ 135
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
E ++ KG+++L+ATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++I
Sbjct: 136 EADKLAKGVNMLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMRQIIKI 195
Query: 570 LKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L Q S+L SAT T V+ LA ++L+ P+ I+ D N+T D L+Q
Sbjct: 196 LPNDDRQ--SMLFSATQTTKVEDLARISLRPGPLFINVVSEKD--NST-----ADGLEQG 246
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
++V R + L SF+ +++ K++VF+++ + Y+ ELL+ + ++
Sbjct: 247 YVVCDSDKRFLLLFSFL-------KRNQKKKVIVFLSSCNSVKYYAELLNYI---DLPVL 296
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
+LHG Q +RT F F + + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRV
Sbjct: 297 ELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRV 356
Query: 749 GRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
GRTAR +G SL+FL PSE+ + L+ ++ + E E +++A
Sbjct: 357 GRTARGTKGKGKSLMFLTPSELGFLRYLKAAKVPLNE--------------YEFPTNKIA 402
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
+ +Q E + LH +A GY S+++ YAS+S L+ ++ ++ L
Sbjct: 403 N---------VQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAK 451
Query: 868 FAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN 901
AKS+ P V IG ++K +K+ N
Sbjct: 452 VAKSYGFPVPPKVNITIGASGKTPQVKKRKINKN 485
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 161/330 (48%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + +T VQ +I P+L G DVL ++TGSGKTLA+ IP I++L + K ++G
Sbjct: 39 MGFSSMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIERLHSL--KFKPRNGTGV 96
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 97 IVITPTRELALQIFGVARELME-FHSQTYGIVIGGANRRQEADKLAKGVNMLIATPGRLL 155
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL QS+L SAT T
Sbjct: 156 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMRQIIKILPND--DRQSMLFSATQT-- 211
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 212 ------------TKVEDLA-----RI------------------------------SLRP 224
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ D N+T D L+Q ++V R + L SF+
Sbjct: 225 G-----------PLFINVVSEKD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL--- 263
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 264 ----KRNQKKKVIVFLSSCNSVKYYAELLN 289
>gi|190195544|gb|ACE73640.1| ATP-dependent RNA helicase DDX18 (predicted) [Sorex araneus]
Length = 553
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 298/539 (55%), Gaps = 61/539 (11%)
Query: 346 DNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKN 405
D + P++TE P + +++ ++P++P + FA S ++ K
Sbjct: 23 DGAQAPEETENVERPDNE--EDDSEVPSLPLGLTGAFEDTSFASLSNL----VNENTLKA 76
Query: 406 LNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 465
+ E M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++
Sbjct: 77 IKE-MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRN 133
Query: 466 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVA 523
G +I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VA
Sbjct: 134 GTGVLILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLGNGINIIVA 190
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L S
Sbjct: 191 TPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFS 247
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++L+ P+ + D + T++ V D L+Q ++V P + R + L
Sbjct: 248 ATQTRKVEDLARISLKKEPLYVGVDD-----DKTNATV--DGLEQGYVVCPSEKRFLLLF 300
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ YH ELL+ + ++ +HG Q++RT
Sbjct: 301 TFL-------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTT 350
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +L
Sbjct: 351 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 410
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L L P E+ + L+ ++ + E E S+++D +Q
Sbjct: 411 LILRPEELGFLRYLKQSKVPLSE--------------FEFSWSKISD---------IQSQ 447
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E + + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 448 LEKLIEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNSLNLPQVALSFGFKVPPFV 504
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 118/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 80 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 137
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 138 LILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 194
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 195 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 251
>gi|323332194|gb|EGA73605.1| Has1p [Saccharomyces cerevisiae AWRI796]
Length = 505
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 271/495 (54%), Gaps = 52/495 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 58 EKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGT 115
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGR
Sbjct: 116 GIIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGR 174
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 175 LLDHLQNTQGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 232
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 233 TKVEDLARISLRPGPLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL- 284
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 285 ------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 335
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL
Sbjct: 336 CNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 395
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E + E +Q E
Sbjct: 396 PNELGFLRYLKASKVPLNEYEFP-----------------------ENKIANVQSQLEKL 432
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---IS 882
+ LH +A GY S+++ YAS+S L+ ++ ++ L AKS+ P V I
Sbjct: 433 IKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 490
Query: 883 GIGKPKNKEELKNKK 897
GK N + K K
Sbjct: 491 ASGKTPNTKRRKTHK 505
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 60 MGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGI 117
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 118 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLL 176
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 177 DHLQNTQGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT-- 232
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 233 ------------TKVEDLA-----RI------------------------------SLRP 245
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 246 G-----------PLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL--- 284
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 285 ----KRNQKKKIIVFLSSCNSVKYYAELLN 310
>gi|340375419|ref|XP_003386232.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Amphimedon
queenslandica]
Length = 505
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 276/507 (54%), Gaps = 47/507 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T + +Q SI+P+L+G D+L ++TGSGKTLA+ +P ++ L ++ ++G
Sbjct: 33 EEMGFTDMMEIQYKSIRPLLEGRDLLGAARTGSGKTLAFLVPAVELLYKL--NFLPRNGT 90
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTREL+LQT + T+L + + GG + E R+ KG+++LVATPGR
Sbjct: 91 GIIIISPTRELSLQTYGVVTELLQYHNH-SHGIIMGGANRRVEVERLEKGVNLLVATPGR 149
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ + ++ L++DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T
Sbjct: 150 LLDHLQNTKGFVYQNLQCLIIDEADRILEIGFEEEMKQIIKILPKKR---QTVLFSATQT 206
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
+ LA ++L+ D + +T + L +Q ++V P + R + L +F+
Sbjct: 207 KKTEDLARVSLKKAPLYVGVDDDKMTSTVEGL------EQGYVVCPSEKRFLLLFAFL-- 258
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+ + K++VF ++ + +H+ELL+ + +I ++G Q +RT F F
Sbjct: 259 -----KRNLDKKVMVFFSSCNSVKFHSELLNYI---DIPVLDIYGRQKQQKRTSTFFEFC 310
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
+ +L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G G +LLFL+P
Sbjct: 311 QSEKCILLCTDVAARGLDIPEVDWIIQYDPPDDPKEYIHRVGRTARAGARGKALLFLLPE 370
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E + A G + T L+ E
Sbjct: 371 ELSFLCYLKQAKVPLNEYE-------------------FAPGKLSNIQTQLEHLME---- 407
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ LH SA GY S+++ YAS+S L+ +FN +Q+ L AK F PSV I
Sbjct: 408 KNYYLHKSARDGYRSYLQAYASHS--LKSVFNVEQLDLQRVAKGFGFSVPPSVSLKIHSS 465
Query: 888 KNKEELKNKKMAINKEKSFKQRGNFSK 914
K +L ++ + +R F+K
Sbjct: 466 KGAAKLAKRRNYGRETDYLAKRKKFTK 492
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T + +Q SI+P+L+G D+L ++TGSGKTLA+ +P ++ L ++ ++G
Sbjct: 35 MGFTDMMEIQYKSIRPLLEGRDLLGAARTGSGKTLAFLVPAVELLYKL--NFLPRNGTGI 92
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+LQT + T+L + + GG + E R+ KG+++LVATPGRLL
Sbjct: 93 IIISPTRELSLQTYGVVTELLQYHNH-SHGIIMGGANRRVEVERLEKGVNLLVATPGRLL 151
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + ++ L++DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T
Sbjct: 152 DHLQNTKGFVYQNLQCLIIDEADRILEIGFEEEMKQIIKILPKKR---QTVLFSATQTKK 208
Query: 181 T 181
T
Sbjct: 209 T 209
>gi|323335994|gb|EGA77270.1| Has1p [Saccharomyces cerevisiae Vin13]
gi|365763984|gb|EHN05510.1| Has1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 505
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 271/495 (54%), Gaps = 52/495 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 58 EKMGFTTMTSVQARTIPPLLAGXDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGT 115
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGR
Sbjct: 116 GIIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGR 174
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 175 LLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 232
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 233 TKVEDLARISLRPGPLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL- 284
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 285 ------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 335
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL
Sbjct: 336 CNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 395
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E + E +Q E
Sbjct: 396 PNELGFLRYLKASKVPLNEYEFP-----------------------ENKIANVQSQLEKL 432
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---IS 882
+ LH +A GY S+++ YAS+S L+ ++ ++ L AKS+ P V I
Sbjct: 433 IKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 490
Query: 883 GIGKPKNKEELKNKK 897
GK N + K K
Sbjct: 491 ASGKTPNTKRRKTHK 505
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 60 MGFTTMTSVQARTIPPLLAGXDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGI 117
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 118 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLL 176
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 177 DHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT-- 232
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 233 ------------TKVEDLA-----RI------------------------------SLRP 245
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 246 G-----------PLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL--- 284
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 285 ----KRNQKKKIIVFLSSCNSVKYYAELLN 310
>gi|229368775|gb|ACQ63054.1| DEAD box polypeptide 18 (predicted) [Dasypus novemcinctus]
Length = 670
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 271/475 (57%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPVRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D + T++ V D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD-----DKTNATV--DGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + KM+VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKMMVFFSSCMSVKYHYELLNYI---DLPVLAIHGRQKQNKRTSTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ I+N ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIYNVNNLNLPQVALSFGFKVPPFV 621
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPVRR---QTMLFSATQT 368
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 369 ----------------------------------RKVEDLARISLKKEPLYVGV------ 388
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D + T D L +Q ++V P + R + L +F+
Sbjct: 389 ---------------------DDDKTNATVDGL------EQGYVVCPSEKRFLLLFTFL- 420
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + KM+VF ++ YH ELL+
Sbjct: 421 ------KKNRKKKMMVFFSSCMSVKYHYELLN 446
>gi|6323947|ref|NP_014017.1| ATP-dependent RNA helicase HAS1 [Saccharomyces cerevisiae S288c]
gi|2500537|sp|Q03532.1|HAS1_YEAST RecName: Full=ATP-dependent RNA helicase HAS1; AltName:
Full=Helicase associated with SET1 protein 1
gi|530347|emb|CAA56799.1| RNA helicase [Saccharomyces cerevisiae]
gi|151945998|gb|EDN64230.1| helicase associated with set1 [Saccharomyces cerevisiae YJM789]
gi|190408516|gb|EDV11781.1| RNA-dependent helicase [Saccharomyces cerevisiae RM11-1a]
gi|207342060|gb|EDZ69940.1| YMR290Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270688|gb|EEU05851.1| Has1p [Saccharomyces cerevisiae JAY291]
gi|259148878|emb|CAY82123.1| Has1p [Saccharomyces cerevisiae EC1118]
gi|285814296|tpg|DAA10191.1| TPA: ATP-dependent RNA helicase HAS1 [Saccharomyces cerevisiae
S288c]
gi|323346981|gb|EGA81258.1| Has1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353213|gb|EGA85513.1| Has1p [Saccharomyces cerevisiae VL3]
gi|349580582|dbj|GAA25742.1| K7_Has1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297463|gb|EIW08563.1| Has1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 505
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 271/495 (54%), Gaps = 52/495 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 58 EKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGT 115
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGR
Sbjct: 116 GIIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGR 174
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 175 LLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 232
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 233 TKVEDLARISLRPGPLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL- 284
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 285 ------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 335
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL
Sbjct: 336 CNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 395
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E + E +Q E
Sbjct: 396 PNELGFLRYLKASKVPLNEYEFP-----------------------ENKIANVQSQLEKL 432
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---IS 882
+ LH +A GY S+++ YAS+S L+ ++ ++ L AKS+ P V I
Sbjct: 433 IKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 490
Query: 883 GIGKPKNKEELKNKK 897
GK N + K K
Sbjct: 491 ASGKTPNTKRRKTHK 505
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 60 MGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGI 117
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 118 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLL 176
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 177 DHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT-- 232
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 233 ------------TKVEDLA-----RI------------------------------SLRP 245
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 246 G-----------PLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL--- 284
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 285 ----KRNQKKKIIVFLSSCNSVKYYAELLN 310
>gi|330926789|ref|XP_003301614.1| hypothetical protein PTT_13150 [Pyrenophora teres f. teres 0-1]
gi|311323488|gb|EFQ90287.1| hypothetical protein PTT_13150 [Pyrenophora teres f. teres 0-1]
Length = 1053
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 177/507 (34%), Positives = 282/507 (55%), Gaps = 59/507 (11%)
Query: 390 TSYEEFPGIHP--FMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
TS P +P F + NL+E GM +T +QQ +I P+L G DVL ++TGS
Sbjct: 563 TSGTTMPMANPTEFAELNLSERTRQAIDGMGFKTMTEIQQKAIPPLLAGRDVLGAAKTGS 622
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLA+ IP I+ L ++R K ++G +++ PTRELALQ + +L + +
Sbjct: 623 GKTLAFLIPAIEMLSQLRFK--PRNGTGVIVVSPTRELALQIFGVARELMEHHSQTF-GI 679
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
GG +E ++RKG+++L+ATPGRLLDH +T+ F + LV+DEADRIL+ G+E
Sbjct: 680 CIGGANRSAEAEKLRKGVNLLIATPGRLLDHLHNTQGFVFKNLRSLVIDEADRILEVGFE 739
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSL 619
++ ++IL ++ Q++L SAT T V+ LA ++L+ P+ I+ D H+T L
Sbjct: 740 DEMRSIIKILPTER---QTMLFSATQTTKVEDLARISLKAGPLYINV-DHRAEHSTVQGL 795
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 679
+Q +++ R L SF+ + ++ K++VF+++ D+++ELL+
Sbjct: 796 ------EQGYVLCDSDTRFRLLFSFL-------KKHQKKKVIVFLSSCASVDFYSELLNY 842
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPS 739
+ ++ LHG + Q RT F F + +SG LICTDVAARGLD+P VDW++Q+ P
Sbjct: 843 I---DLPVLGLHGKLKQQARTNRFFEFVNAQSGTLICTDVAARGLDIPEVDWVIQFDPPD 899
Query: 740 SSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
DY+HRVGRTAR + +G SL+FL+PSEV ++ L+ R+ + E +L +L++
Sbjct: 900 DPRDYIHRVGRTARGANGKGRSLMFLLPSEVGFLKLLKESRVPLVEFELP--ANKILNI- 956
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
Q E+ + + L+ SA GY S+++ YAS+S LR +F
Sbjct: 957 --------------------QSQLEALISKNYYLNKSAKDGYRSYLQSYASHS--LRSVF 994
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIG 885
+ ++ L AKSF P + +G
Sbjct: 995 DVNKLDLVKVAKSFGFSTPPRIDITLG 1021
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L ++R K ++G
Sbjct: 592 MGFKTMTEIQQKAIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSQLRFK--PRNGTGV 649
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG +E ++RKG+++L+ATPGRLL
Sbjct: 650 IVVSPTRELALQIFGVARELMEHHSQTF-GICIGGANRSAEAEKLRKGVNLLIATPGRLL 708
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +T+ F + LV+DEADRIL+ G+E ++ ++IL ++ Q++L SAT T
Sbjct: 709 DHLHNTQGFVFKNLRSLVIDEADRILEVGFEDEMRSIIKILPTER---QTMLFSATQT 763
>gi|242032643|ref|XP_002463716.1| hypothetical protein SORBIDRAFT_01g004730 [Sorghum bicolor]
gi|241917570|gb|EER90714.1| hypothetical protein SORBIDRAFT_01g004730 [Sorghum bicolor]
Length = 623
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 268/479 (55%), Gaps = 56/479 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L +R S ++G
Sbjct: 145 MNYTHLTQIQARSIPHLLEGKDVMGAAKTGSGKTLAFLIPAIELLYHLR--FSSRNGTGV 202
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L K + + ++ GG +SE ++ KG+++LVATPGRLL
Sbjct: 203 IVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGNNRRSEADQLAKGVNLLVATPGRLL 261
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T++ + +++ LV+DEADRIL+Q +E D+ + + L + + Q++L SAT TP
Sbjct: 262 DHLQNTKSFIYKRLKCLVIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQTPE 318
Query: 590 VQRLAGMTLQN-------PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
V++ A ++ + P+ + D S + L+Q + V + R + L
Sbjct: 319 VEKFAKLSFEKNEESKEKPVYVGVDDDK-------SKATVEGLQQGYCVISSEKRFLVLY 371
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F L K QN K++VF ++ + +H ELL+ LG + + +HG Q +RT
Sbjct: 372 AF-LKKKQN------KKIMVFFSSCNSVKFHAELLN-FLGIDCS--DIHGKQKQQKRTTT 421
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSL 761
F +F + G+L+CT+VAARGLD+P VD+IVQY P DY+HRVGRTAR +GS+L
Sbjct: 422 FFSFCKAEKGILLCTNVAARGLDIPDVDYIVQYDPPDEPKDYIHRVGRTARGEKGKGSAL 481
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL+P E+K + L+ ++ + E + + LQ
Sbjct: 482 LFLLPEELKFLIYLKAAKVTLTEYEFN-----------------------QKNVPNLQSH 518
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E+ V + L+ SA + Y S+V Y S+S ++ IFN Q+ L A SF R+ P V
Sbjct: 519 LENIVGENYFLNQSAKEAYRSYVLAYDSHS--MKDIFNVHQLDLQKVAASFCFRNPPKV 575
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 126/195 (64%), Gaps = 14/195 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L +R S ++G
Sbjct: 145 MNYTHLTQIQARSIPHLLEGKDVMGAAKTGSGKTLAFLIPAIELLYHLR--FSSRNGTGV 202
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L K + + ++ GG +SE ++ KG+++LVATPGRLL
Sbjct: 203 IVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGNNRRSEADQLAKGVNLLVATPGRLL 261
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T++ + +++ LV+DEADRIL+Q +E D+ + + L + + Q++L SAT TP
Sbjct: 262 DHLQNTKSFIYKRLKCLVIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQTP- 317
Query: 181 TCWCKHTETLKFSKV 195
E KF+K+
Sbjct: 318 -------EVEKFAKL 325
>gi|326478694|gb|EGE02704.1| ATP-dependent RNA helicase has1 [Trichophyton equinum CBS 127.97]
Length = 568
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 264/474 (55%), Gaps = 49/474 (10%)
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
GM T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 107 GMGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTG 164
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRL
Sbjct: 165 ALIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRL 223
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SAT T
Sbjct: 224 LDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSATQTT 281
Query: 589 AVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++L+ P+ I+ D H+T D + +Q FI+ R + L SF+
Sbjct: 282 KVEDLARISLKPGPLYINV-DHKKEHSTVDGV------EQGFIICEAHKRFLLLFSFL-- 332
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ + Y++ELL+ + ++ LHG + Q +RT F F
Sbjct: 333 -----KKNAKKKIIVFFSSCNSVKYYSELLNYI---DLPVLSLHGKLKQQKRTNTFFEFC 384
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIP 766
+ G LICTDVAARGLD+P VD+IVQ P DY+HRVGRTAR G G SL+FL P
Sbjct: 385 NSAQGTLICTDVAARGLDIPAVDYIVQLDPPDDPRDYIHRVGRTARGKGKVGRSLMFLQP 444
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
SEV + L+ R+ + E + ++++++ Q E +
Sbjct: 445 SEVGFINHLREARVPVVEFEFP--TKHIINI---------------------QSQLEKLI 481
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA +GY S++ YAS+S LR +F+ ++ L AKS+ P V
Sbjct: 482 SQNYYLNQSAKEGYRSYLHAYASHS--LRSVFDVNKLDLVKVAKSYGFTTPPRV 533
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G A
Sbjct: 108 MGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTGA 165
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRLL
Sbjct: 166 LIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRLL 224
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SAT T
Sbjct: 225 DHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSATQT 280
>gi|300123001|emb|CBK24008.2| unnamed protein product [Blastocystis hominis]
Length = 457
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 274/498 (55%), Gaps = 57/498 (11%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+TT+Q +I +L G DVL ++TGSGKTLA+ IP+I+ L ++ K ++ G A+II P
Sbjct: 1 MTTIQSKAIPVLLAGKDVLGAAKTGSGKTLAFVIPVIELLSRLKWK--QRQGTGAIIITP 58
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q + T L S + + GG KSE +++ KGISIL+ATPGRLLDH ++
Sbjct: 59 TRELAMQIFGVVTDLA-SAHGLTHGIVMGGANRKSEASKLVKGISILIATPGRLLDHLQN 117
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T+ F ++ LV+DEADRIL G+E D+ + +L K++ Q++L SAT VQ LA
Sbjct: 118 TKGFNFENLQCLVIDEADRILQIGFEEDMKAIMRLLPKKR---QTMLFSATQDKNVQGLA 174
Query: 595 GMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
++L NP+ I +H+ + + L+Q ++V R + L +F+ Q
Sbjct: 175 KLSLSDNPVYIG------VHDACEEATV-SRLEQGYVVCGSDQRFLLLYTFLKKNIQ--- 224
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
+ K++VF ++ + +H ELL+ + +I +HG Q R+ VF F + K+GV
Sbjct: 225 ---KKKIMVFFSSCNSVQFHAELLNYI---DIPVMCIHGKQKQQRRSAVFFEFVNAKTGV 278
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLLFLIPSEVKL 771
L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G E G +LLFL+PSE
Sbjct: 279 LLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTAR-GKEGVGRALLFLLPSETMF 337
Query: 772 VEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
+ L+ ++ + E K+ + N+ S L +L N
Sbjct: 338 LAYLRAAKVMMNEYVFPKNKVANIQS-----QLLKLMSRNF------------------- 373
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP----SVISGIGK 886
LH + + + S++ YAS+S L++IFN Q+ L A F P S + GK
Sbjct: 374 YLHKAGREAFRSYIMAYASHS--LKNIFNVNQLDLKEVAMGFGFEVPPKINLSFVKNSGK 431
Query: 887 PKNKEELKNKKMAINKEK 904
++++K K ++K
Sbjct: 432 NTREKQMKGKGAQPKRQK 449
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 6/171 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+TT+Q +I +L G DVL ++TGSGKTLA+ IP+I+ L ++ K ++ G A+II P
Sbjct: 1 MTTIQSKAIPVLLAGKDVLGAAKTGSGKTLAFVIPVIELLSRLKWK--QRQGTGAIIITP 58
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q + T L S + + GG KSE +++ KGISIL+ATPGRLLDH ++
Sbjct: 59 TRELAMQIFGVVTDLA-SAHGLTHGIVMGGANRKSEASKLVKGISILIATPGRLLDHLQN 117
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T+ F ++ LV+DEADRIL G+E D+ + +L K++ Q++L SAT
Sbjct: 118 TKGFNFENLQCLVIDEADRILQIGFEEDMKAIMRLLPKKR---QTMLFSAT 165
>gi|83764585|dbj|BAE54729.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 531
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 63/577 (10%)
Query: 342 NIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPF 401
N + E E KS + N D+P+ T RL P + P + E G+
Sbjct: 9 NTEESEQEASDNEEEKSDAEETPAANGEDLPSADTIRL-PQQDG--DPVKFTEL-GLSEK 64
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
K + EGM +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K
Sbjct: 65 TMKGI-EGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP 123
Query: 462 SRKDGIYAVIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
++G A+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG
Sbjct: 124 --RNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKG 176
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
+++LVATPGRLLDH ++T+ F + L++DEADRIL+ G+E ++ + +IL + Q
Sbjct: 177 VNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILPSENRQ- 235
Query: 578 QSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
++L SAT T V+ LA ++L+ P+ I+ D H+T + L +Q +++
Sbjct: 236 -TMLFSATQTTKVEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICEADK 287
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
R + L SF+ + + K++VF+++ + Y+ ELL+ + ++ LHG Q
Sbjct: 288 RFLLLFSFL-------KRNLKKKIIVFLSSCNSVKYYGELLNYI---DLPVLDLHGKQKQ 337
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+RT F F + K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +
Sbjct: 338 QKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSN 397
Query: 757 -EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G SL+FL PSEV ++ L+ R+ + E Q +++V
Sbjct: 398 GKGRSLMFLQPSEVGFLKHLKEARVPVVEFDFP--TQKIVNV------------------ 437
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
Q E + Q L+ SA +GY S+++ YAS+S LR +F+ ++ L +K F
Sbjct: 438 ---QSQLEKLIGQNYYLNKSAKEGYRSYLQAYASHS--LRSVFDVHKLDLVKVSKGFGFS 492
Query: 876 DAPSVISGIGKP-KNKEELKNKKMAINKEKSFKQRGN 911
P + +G K+K + FK++ N
Sbjct: 493 TPPRIDIQLGSSLKDKPPQGRRNYGSQPGSKFKRKHN 529
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K ++G A
Sbjct: 72 MGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP--RNGTGA 129
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG+++LVATP
Sbjct: 130 IIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKGVNLLVATP 184
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ F + L++DEADRIL+ G+E ++ + +IL + Q++L SAT
Sbjct: 185 GRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILPSENR--QTMLFSAT 242
Query: 177 LT 178
T
Sbjct: 243 QT 244
>gi|355683245|gb|AER97061.1| DEAD box polypeptide 18 [Mustela putorius furo]
Length = 584
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 269/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 112 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 169
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 170 LILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 226
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 227 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 283
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 284 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 335
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 336 ------KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQF 386
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 387 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 446
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E + S+++D +Q E
Sbjct: 447 PEELGFLRYLKQSKVPLSEFQFS--------------WSKISD---------IQSQLEKL 483
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 484 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 536
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 162/332 (48%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 112 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 169
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 170 LILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 226
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 227 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 283
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 284 ----------------------------------RKVEDLARISLKKEPLYVGV------ 303
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D + T D L +Q ++V P + R + L +F+
Sbjct: 304 ---------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL- 335
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 336 ------KKNRKKKLMVFFSSCKSVKYHYELLN 361
>gi|156044094|ref|XP_001588603.1| hypothetical protein SS1G_10150 [Sclerotinia sclerotiorum 1980]
gi|154694539|gb|EDN94277.1| hypothetical protein SS1G_10150 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 268/477 (56%), Gaps = 50/477 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E M +T +Q+ I P+L G DVL ++TGSGKTL++ IP ++ L +R K
Sbjct: 109 KALTEDMKFDTMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLHSLRFK--P 166
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +++ PTRELALQ + +L + + GG ++E ++ KG+++L+A
Sbjct: 167 RNGTGVIVVSPTRELALQIFGVARELMAHHSQTY-GIVMGGANRRAEAEKLVKGVNLLIA 225
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L K Q++L S
Sbjct: 226 TPGRLLDHLQNTQGFIFKNLKALVIDEADRILEAGFEDEMKQIVKVLPKD--DRQTMLFS 283
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++L+ P+ I+ D+ H+T + L +Q ++V R + L
Sbjct: 284 ATQTTKVEDLARISLRPGPLYINV-DNKKEHSTVEGL------EQGYVVCDSDKRFLLLF 336
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SF+ + + K++VF ++ YH ELL+ + ++ LHG Q +RT
Sbjct: 337 SFL-------KRNLKKKIIVFFSSCACVKYHAELLNYI---DLPVLDLHGKQKQQKRTNT 386
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSL 761
F F + K G LICTDVAARGLD+P VDW++Q+ P TDY+HRVGRTAR +G SL
Sbjct: 387 FFEFCNAKQGTLICTDVAARGLDIPDVDWVIQFDPPDDPTDYIHRVGRTARGNDGKGRSL 446
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL PSEV + L+ RI + E + V ++ LS+L
Sbjct: 447 LFLQPSEVGFLTHLKTARIPVVEFEFPAA----KIVNIQSQLSKL--------------- 487
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
+ Q L+ SA +GY S+++ YAS+S LR +F+ ++ L AKSF DAP
Sbjct: 488 ----IAQNYYLNKSAKEGYKSYLQAYASHS--LRSVFDVGKLDLVKVAKSFGF-DAP 537
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 115 MKFDTMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLHSLRFK--PRNGTGV 172
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 173 IVVSPTRELALQIFGVARELMAHHSQTY-GIVMGGANRRAEAEKLVKGVNLLIATPGRLL 231
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L K Q++L SAT T
Sbjct: 232 DHLQNTQGFIFKNLKALVIDEADRILEAGFEDEMKQIVKVLPKD--DRQTMLFSATQT 287
>gi|348586043|ref|XP_003478780.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Cavia porcellus]
Length = 659
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 271/475 (57%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G A
Sbjct: 186 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGA 243
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 244 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 300
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 301 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPIRR---QTMLFSATQT 357
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D + T++ V D L+Q ++V P + R + L +F+
Sbjct: 358 RKVEDLARISLKKEPLYVGVDD-----DKTNATV--DGLEQGYVVCPSEKRFLLLFTFL- 409
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 410 ------KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 460
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 461 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 520
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 521 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 557
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IF+ ++L A SF + P V
Sbjct: 558 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFDVNNLNLPQVALSFGFKVPPFV 610
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G A
Sbjct: 186 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGA 243
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 244 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 300
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 301 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPIRR---QTMLFSATQT 357
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 358 ----------------------------------RKVEDLARISLKKEPLYVGV------ 377
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D + T D L +Q ++V P + R + L +F+
Sbjct: 378 ---------------------DDDKTNATVDGL------EQGYVVCPSEKRFLLLFTFL- 409
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 410 ------KKNRKKKLMVFFSSCKSVKYHYELLN 435
>gi|198429557|ref|XP_002122407.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
isoform 2 [Ciona intestinalis]
Length = 575
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 275/504 (54%), Gaps = 58/504 (11%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M + + +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ + ++R ++G
Sbjct: 106 EDMGFSHMMEIQAKSIPPLLEGRDLLAAAKTGSGKTLAFLIPAIELMYKLR--FMPRNGT 163
Query: 468 YAVIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++I PTRELA+Q + L C+++ I+ GG SE ++ GI+I+VA
Sbjct: 164 GVIVISPTRELAMQIYGVLQDLLKHHCQTYGLIM-----GGSNRSSEAKKLGNGINIIVA 218
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F ++ L++DEADRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 219 TPGRLLDHLQNTQEFMFRNLQCLIIDEADRILEVGFEEEMKQIVRLLPKRR---QTMLFS 275
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T ++ LA ++L+ P+ + DS + D L+Q + V P + R + L
Sbjct: 276 ATQTKKIEDLARVSLKKMPLYVGVDDS-------EQSATVDGLEQGYAVCPSEKRFLVLF 328
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ + + K++VF ++ +H ELL+ + ++ +HG Q++RT
Sbjct: 329 TFL-------RRNRDKKVMVFFSSCMSVKFHYELLNYI---DLPCMSIHGRQKQTKRTTT 378
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + G+L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR V G +L
Sbjct: 379 FFQFCNADKGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGVNGRGHAL 438
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL PSE+ + L++ ++ + E E S++A+ +Q
Sbjct: 439 LFLRPSELGFLHYLRHAKVPVSEF--------------EFSWSKIAN---------IQTQ 475
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E + + LH S+ + Y S++R YAS+S L+ IFN + + L A SF P V
Sbjct: 476 LERLIQKNYFLHKSSQEAYKSYIRAYASHS--LKSIFNVETLDLAKVASSFGFPVPPYVD 533
Query: 882 SGIGKPKNKEELKNKKMAINKEKS 905
+ K ++ + + EKS
Sbjct: 534 LNVHSKKMSKQSRRNQYGAQNEKS 557
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + + +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ + ++R ++G
Sbjct: 108 MGFSHMMEIQAKSIPPLLEGRDLLAAAKTGSGKTLAFLIPAIELMYKLR--FMPRNGTGV 165
Query: 61 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
++I PTRELA+Q + L C+++ I+ GG SE ++ GI+I+VATP
Sbjct: 166 IVISPTRELAMQIYGVLQDLLKHHCQTYGLIM-----GGSNRSSEAKKLGNGINIIVATP 220
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ F ++ L++DEADRIL+ G+E ++ + + +L K++ Q++L SAT
Sbjct: 221 GRLLDHLQNTQEFMFRNLQCLIIDEADRILEVGFEEEMKQIVRLLPKRR---QTMLFSAT 277
Query: 177 LT 178
T
Sbjct: 278 QT 279
>gi|440893673|gb|ELR46355.1| ATP-dependent RNA helicase DDX18 [Bos grunniens mutus]
Length = 671
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 255
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 314
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 315 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 371
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 372 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 421
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F S
Sbjct: 422 ----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQFCS 474
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 475 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 534
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 535 ELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 571
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 572 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 622
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 255
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 314
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 315 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT-- 369
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 370 --------------------------------RKVEDLARISLKKEPLYVGV-------- 389
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D + T D L +Q ++V P + R + L +F+
Sbjct: 390 -------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL--- 421
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 422 ----KKNRKKKLMVFFSSCKSVKYHYELLN 447
>gi|354543386|emb|CCE40105.1| hypothetical protein CPAR2_101430 [Candida parapsilosis]
Length = 578
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 279/497 (56%), Gaps = 51/497 (10%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
S+E+ P MK + E M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP
Sbjct: 113 SFEKADFSEPTMKA-IRE-MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA 170
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
I+ + + KI ++G +II PTRELALQ + +L + + + GG + E
Sbjct: 171 IELMYSL--KIKPRNGTAVIIITPTRELALQIFGVARQLMEHHSQTC-GIVIGGADRRQE 227
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
++ KG+++LVATPGRLLDH K+T+ FS ++ L++DEADRIL+ G+E ++ + ++IL
Sbjct: 228 ATKLAKGVNLLVATPGRLLDHLKNTQGFVFSNLKALIIDEADRILEIGFEEEMKQIIKIL 287
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHF 629
+ Q ++L SAT T V+ LA ++L+ P+ I+ D+ D L+Q +
Sbjct: 288 PNEDRQ--TMLFSATQTTKVEDLARISLRPGPLYINVVSERDVSTA-------DGLEQGY 338
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
+V R + L SF+ +NV + K++VF+++ + +++ELL+ + ++
Sbjct: 339 VVCDSDKRFLLLFSFL---KRNVKK----KIIVFLSSCNSVKFYSELLNYI---DLPVLD 388
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q +RT F F + K G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVG
Sbjct: 389 LHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVG 448
Query: 750 RTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD 808
RTAR +G SL+FL PSE+ + L+ + + E E +++A
Sbjct: 449 RTARGTQGKGKSLMFLTPSELGFLRYLKAANVPLNE--------------YEFPANKIA- 493
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
NV++ T L + +LH SA GY ++++ YAS+S L+ ++ ++ L
Sbjct: 494 -NVQSQLTKL-------IKTNYLLHQSAKDGYRAYLQAYASHS--LKTVYQIDKLDLVKV 543
Query: 869 AKSFALRDAPSVISGIG 885
KSF P V IG
Sbjct: 544 GKSFGFDVPPKVNITIG 560
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ + + KI ++G
Sbjct: 130 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELMYSL--KIKPRNGTAV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG + E ++ KG+++LVATPGRLL
Sbjct: 188 IIITPTRELALQIFGVARQLMEHHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ FS ++ L++DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 247 DHLKNTQGFVFSNLKALIIDEADRILEIGFEEEMKQIIKILPNEDR--QTMLFSATQT 302
>gi|71020299|ref|XP_760380.1| hypothetical protein UM04233.1 [Ustilago maydis 521]
gi|74700904|sp|Q4P6N0.1|HAS1_USTMA RecName: Full=ATP-dependent RNA helicase HAS1
gi|46100049|gb|EAK85282.1| hypothetical protein UM04233.1 [Ustilago maydis 521]
Length = 517
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 269/484 (55%), Gaps = 58/484 (11%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+ M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L R K ++G
Sbjct: 66 DAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLH--RLKFKPRNGT 123
Query: 468 YAVIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
A+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VA
Sbjct: 124 GAIIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVA 178
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL Q S+L S
Sbjct: 179 TPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNRQ--SMLFS 236
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T VQ LA ++L+ P+ I+ D+ +T S L+Q ++V R + L
Sbjct: 237 ATQTTKVQDLARISLRPGPLYINV--HADLAASTVS-----RLEQGYVVCESDRRFLLLF 289
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ K++VFM++ + YH++LL+ + ++ LHG Q +RT
Sbjct: 290 TFL-------KKNAGKKIIVFMSSCNSVKYHSDLLNFI---DVPVLDLHGKQKQQKRTNT 339
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F + + G L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G+ G SLL
Sbjct: 340 FFEYCNAPCGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNSGKSLL 399
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
FL+P+E+ + L+ ++ + E D + N+ +G L +L N
Sbjct: 400 FLLPTELGFLRFLKVAKVPLNEYTFPSDKVANV-----QGQLEKLISKNY---------- 444
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
LH SA GY S+++ Y SYS L+ IF+ ++ L AK++ P V
Sbjct: 445 ---------YLHQSARDGYRSYLQAYGSYS--LKRIFDIHKLDLAKVAKAYGFSVPPKVN 493
Query: 882 SGIG 885
IG
Sbjct: 494 ITIG 497
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L R K ++G A
Sbjct: 68 MGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLH--RLKFKPRNGTGA 125
Query: 61 VIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VATP
Sbjct: 126 IIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVATP 180
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL QS+L SAT
Sbjct: 181 GRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNR--QSMLFSAT 238
Query: 177 LT 178
T
Sbjct: 239 QT 240
>gi|198429555|ref|XP_002122319.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
isoform 1 [Ciona intestinalis]
Length = 627
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 275/504 (54%), Gaps = 58/504 (11%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M + + +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ + ++R ++G
Sbjct: 158 EDMGFSHMMEIQAKSIPPLLEGRDLLAAAKTGSGKTLAFLIPAIELMYKLR--FMPRNGT 215
Query: 468 YAVIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++I PTRELA+Q + L C+++ I+ GG SE ++ GI+I+VA
Sbjct: 216 GVIVISPTRELAMQIYGVLQDLLKHHCQTYGLIM-----GGSNRSSEAKKLGNGINIIVA 270
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F ++ L++DEADRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 271 TPGRLLDHLQNTQEFMFRNLQCLIIDEADRILEVGFEEEMKQIVRLLPKRR---QTMLFS 327
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T ++ LA ++L+ P+ + DS + D L+Q + V P + R + L
Sbjct: 328 ATQTKKIEDLARVSLKKMPLYVGVDDS-------EQSATVDGLEQGYAVCPSEKRFLVLF 380
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ + + K++VF ++ +H ELL+ + ++ +HG Q++RT
Sbjct: 381 TFL-------RRNRDKKVMVFFSSCMSVKFHYELLNYI---DLPCMSIHGRQKQTKRTTT 430
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + G+L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR V G +L
Sbjct: 431 FFQFCNADKGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGVNGRGHAL 490
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL PSE+ + L++ ++ + E E S++A+ +Q
Sbjct: 491 LFLRPSELGFLHYLRHAKVPVSEF--------------EFSWSKIAN---------IQTQ 527
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E + + LH S+ + Y S++R YAS+S L+ IFN + + L A SF P V
Sbjct: 528 LERLIQKNYFLHKSSQEAYKSYIRAYASHS--LKSIFNVETLDLAKVASSFGFPVPPYVD 585
Query: 882 SGIGKPKNKEELKNKKMAINKEKS 905
+ K ++ + + EKS
Sbjct: 586 LNVHSKKMSKQSRRNQYGAQNEKS 609
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + + +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ + ++R ++G
Sbjct: 160 MGFSHMMEIQAKSIPPLLEGRDLLAAAKTGSGKTLAFLIPAIELMYKLR--FMPRNGTGV 217
Query: 61 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
++I PTRELA+Q + L C+++ I+ GG SE ++ GI+I+VATP
Sbjct: 218 IVISPTRELAMQIYGVLQDLLKHHCQTYGLIM-----GGSNRSSEAKKLGNGINIIVATP 272
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ F ++ L++DEADRIL+ G+E ++ + + +L K++ Q++L SAT
Sbjct: 273 GRLLDHLQNTQEFMFRNLQCLIIDEADRILEVGFEEEMKQIVRLLPKRR---QTMLFSAT 329
Query: 177 LT 178
T
Sbjct: 330 QT 331
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T+ F ++ L++DEADRIL+ G+E ++ + + +L K++ Q++L SAT T ++
Sbjct: 280 QNTQEFMFRNLQCLIIDEADRILEVGFEEEMKQIVRLLPKRR---QTMLFSATQTKKIED 336
Query: 245 LAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L+ P+ + DS + D L+Q + V P + R + L +F+
Sbjct: 337 LARVSLKKMPLYVGVDDS-------EQSATVDGLEQGYAVCPSEKRFLVLFTFL------ 383
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
+ + K++VF ++ +H ELL+
Sbjct: 384 -RRNRDKKVMVFFSSCMSVKFHYELLN 409
>gi|317138177|ref|XP_001816731.2| ATP-dependent RNA helicase has1 [Aspergillus oryzae RIB40]
gi|91206843|sp|Q2UUN6.2|HAS1_ASPOR RecName: Full=ATP-dependent RNA helicase has1
gi|391869999|gb|EIT79187.1| ATP-dependent RNA helicase pitchoune [Aspergillus oryzae 3.042]
Length = 596
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 63/577 (10%)
Query: 342 NIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPF 401
N + E E KS + N D+P+ T RL P + P + E G+
Sbjct: 74 NTEESEQEASDNEEEKSDAEETPAANGEDLPSADTIRL-PQQDG--DPVKFTEL-GLSEK 129
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
K + EGM +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K
Sbjct: 130 TMKGI-EGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP 188
Query: 462 SRKDGIYAVIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
++G A+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG
Sbjct: 189 --RNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKG 241
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
+++LVATPGRLLDH ++T+ F + L++DEADRIL+ G+E ++ + +IL +
Sbjct: 242 VNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILPSE--NR 299
Query: 578 QSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T V+ LA ++L+ P+ I+ D H+T + L +Q +++
Sbjct: 300 QTMLFSATQTTKVEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICEADK 352
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
R + L SF+ + + K++VF+++ + Y+ ELL+ + ++ LHG Q
Sbjct: 353 RFLLLFSFL-------KRNLKKKIIVFLSSCNSVKYYGELLNYI---DLPVLDLHGKQKQ 402
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+RT F F + K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +
Sbjct: 403 QKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSN 462
Query: 757 -EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G SL+FL PSEV ++ L+ R+ + E Q +++V
Sbjct: 463 GKGRSLMFLQPSEVGFLKHLKEARVPVVEFDFP--TQKIVNV------------------ 502
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
Q E + Q L+ SA +GY S+++ YAS+S LR +F+ ++ L +K F
Sbjct: 503 ---QSQLEKLIGQNYYLNKSAKEGYRSYLQAYASHS--LRSVFDVHKLDLVKVSKGFGFS 557
Query: 876 DAPSVISGIGKP-KNKEELKNKKMAINKEKSFKQRGN 911
P + +G K+K + FK++ N
Sbjct: 558 TPPRIDIQLGSSLKDKPPQGRRNYGSQPGSKFKRKHN 594
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K ++G A
Sbjct: 137 MGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP--RNGTGA 194
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG+++LVATP
Sbjct: 195 IIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKGVNLLVATP 249
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ F + L++DEADRIL+ G+E ++ + +IL + Q++L SAT
Sbjct: 250 GRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILPSE--NRQTMLFSAT 307
Query: 177 LT 178
T
Sbjct: 308 QT 309
>gi|430814249|emb|CCJ28487.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 554
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 283/532 (53%), Gaps = 71/532 (13%)
Query: 373 NVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLN---------EGMNITQVTTVQQLSI 423
NVP + + + AP + +P M +L+ M +++T VQ +I
Sbjct: 45 NVPLSKEQLTPASTVAPDTAVTLNSSNPVMFSDLSLSKPTAKALAEMGFSKMTEVQARTI 104
Query: 424 QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTL 483
++ G DVL ++TGSGKTLA+ IP I+ L ++ K GI ++I PTRELALQ
Sbjct: 105 PILMAGKDVLGAAKTGSGKTLAFLIPAIEILYFLKFKPRNGTGI--IVISPTRELALQIF 162
Query: 484 EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKV 543
+ L K + + GG ++E ++ KG+++L+ATPGRLLDH ++T+ + +
Sbjct: 163 GVVNDLLKYHSQTF-GVVIGGANRRAEVEKLEKGVNLLIATPGRLLDHLQNTKGFVYKNL 221
Query: 544 EHLVLDEADRILDQGYERDIAEFLEILKKQKPQF-------------QSILLSATLTPAV 590
+ L++DEADRIL+ G+E ++ + ++IL F QS+L SAT T V
Sbjct: 222 KALIIDEADRILEIGFEDEMRQIIKILPSGIFYFVYIYIYIVLLENRQSMLFSATQTTKV 281
Query: 591 QRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
+ LA ++L+ P+ I+ +D N+T D L+Q ++V R + L +F+
Sbjct: 282 EDLARISLRPGPLYINV--DSDKKNST-----VDGLEQGYVVCDSDKRFLLLFTFL---- 330
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
+ + K++VF ++ + YH+ELL+ + +I LHG Q +RT F F +
Sbjct: 331 ---KRNLKKKIIVFFSSCNSVKYHSELLNYI---DIPVLDLHGKQKQQKRTNTFFEFSNA 384
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSE 768
K G+LICTDVAARGLD+P VDWI+QY P DY+HRVGRTAR +G SL+FL+PSE
Sbjct: 385 KQGILICTDVAARGLDIPAVDWIIQYDPPDDPRDYIHRVGRTARGTKGKGRSLMFLVPSE 444
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L+ ++ + E + S+LA+ +Q+ E + +
Sbjct: 445 LGFLRYLKAAKVSLNEY----------------EFSKLAN---------IQLQLEKLISK 479
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+ SA GY S+++ Y+SY+ L+ IF+ + L AKSF PSV
Sbjct: 480 NYYLNRSAKDGYRSYLQAYSSYA--LKSIFDVNNLDLAKVAKSFGFATPPSV 529
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 166/331 (50%), Gaps = 66/331 (19%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T VQ +I ++ G DVL ++TGSGKTLA+ IP I+ L ++ K GI
Sbjct: 91 MGFSKMTEVQARTIPILMAGKDVLGAAKTGSGKTLAFLIPAIEILYFLKFKPRNGTGI-- 148
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 149 IVISPTRELALQIFGVVNDLLKYHSQTF-GVVIGGANRRAEVEKLEKGVNLLIATPGRLL 207
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + ++ L++DEADRIL+ G+E ++ + ++IL F I +
Sbjct: 208 DHLQNTKGFVYKNLKALIIDEADRILEIGFEDEMRQIIKILPSGIFYFVYIYI------- 260
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
++VL E QS+L SAT T
Sbjct: 261 ----------------YIVLLE-------------------------NRQSMLFSATQTT 279
Query: 241 AVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ LA ++L+ P+ I+ +D N+T D L+Q ++V R + L +F+
Sbjct: 280 KVEDLARISLRPGPLYINV--DSDKKNST-----VDGLEQGYVVCDSDKRFLLLFTFL-- 330
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ + K++VF ++ + YH+ELL+
Sbjct: 331 -----KRNLKKKIIVFFSSCNSVKYHSELLN 356
>gi|350593265|ref|XP_001927639.3| PREDICTED: ATP-dependent RNA helicase DDX18 [Sus scrofa]
Length = 669
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 196 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 253
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 254 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 312
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 313 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 369
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 370 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 419
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 420 ----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQFCN 472
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 473 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 532
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 533 ELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 569
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 570 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 620
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 196 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 253
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 254 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 312
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 313 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT-- 367
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 368 --------------------------------RKVEDLARISLKKEPLYVGV-------- 387
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D + T D L +Q ++V P + R + L +F+
Sbjct: 388 -------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL--- 419
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 420 ----KKNRKKKLMVFFSSCKSVKYHYELLN 445
>gi|326470514|gb|EGD94523.1| ATP-dependent RNA helicase HAS1 [Trichophyton tonsurans CBS 112818]
Length = 568
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 270/486 (55%), Gaps = 49/486 (10%)
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
GM T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 107 GMGFTTMTEIQQRGIPPSLAGRDLLGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTG 164
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRL
Sbjct: 165 ALIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRL 223
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SAT T
Sbjct: 224 LDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSATQTT 281
Query: 589 AVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++L+ P+ I+ D H+T D + +Q FI+ R + L SF+
Sbjct: 282 KVEDLARISLKPGPLYINV-DHKKEHSTVDGV------EQGFIICEAHKRFLLLFSFL-- 332
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ + Y++ELL+ + ++ LHG + Q +RT F F
Sbjct: 333 -----KKNAKKKIIVFFSSCNSVKYYSELLNYI---DLPVLSLHGKLKQQKRTNTFFEFC 384
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIP 766
+ G LICTDVAARGLD+P VD+IVQ P DY+HRVGRTAR G G SL+FL P
Sbjct: 385 NSAQGTLICTDVAARGLDIPAVDYIVQLDPPDDPRDYIHRVGRTARGKGKVGRSLMFLQP 444
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
SEV + L+ R+ + E + ++++++ Q E +
Sbjct: 445 SEVGFINHLREARVPVVEFEFP--TKHIINI---------------------QSQLEKLI 481
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
Q L+ SA +GY S++ YAS+S LR +F+ ++ L AKS+ P V +G
Sbjct: 482 SQNYYLNQSAKEGYRSYLHAYASHS--LRSVFDVNKLDLVKVAKSYGFTTPPRVDITLGA 539
Query: 887 PKNKEE 892
++++
Sbjct: 540 SMSRDK 545
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G A
Sbjct: 108 MGFTTMTEIQQRGIPPSLAGRDLLGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTGA 165
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRLL
Sbjct: 166 LIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRLL 224
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SAT T
Sbjct: 225 DHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSATQT 280
>gi|359322003|ref|XP_533327.3| PREDICTED: ATP-dependent RNA helicase DDX18 [Canis lupus
familiaris]
Length = 669
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 268/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 196 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 253
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L + V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 254 LILSPTRELAMQTFGVLKEL---MMYHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 310
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 311 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 367
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 368 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 419
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 420 ------KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQF 470
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 471 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILH 530
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 531 PEELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEKL 567
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 568 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 620
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 161/332 (48%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 196 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 253
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L + V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 254 LILSPTRELAMQTFGVLKEL---MMYHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 310
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 311 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 367
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 368 ----------------------------------RKVEDLARISLKKEPLYVGV------ 387
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D + T D L +Q ++V P + R + L +F+
Sbjct: 388 ---------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL- 419
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 420 ------KKNRKKKLMVFFSSCKSVKYHYELLN 445
>gi|351694587|gb|EHA97505.1| ATP-dependent RNA helicase DDX18 [Heterocephalus glaber]
Length = 668
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 271/475 (57%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G A
Sbjct: 195 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGA 252
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 253 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 309
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 310 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPIRR---QTMLFSATQT 366
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D + T++ V D L+Q ++V P + R + L +F+
Sbjct: 367 RKVEDLARISLKKEPLYVGVDD-----DKTNATV--DGLEQGYVVCPSEKRFLLLFTFL- 418
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 419 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 469
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 470 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 529
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 530 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 566
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IF+ ++L A SF + P V
Sbjct: 567 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFDVNNLNLPQVALSFGFKVPPFV 619
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G A
Sbjct: 195 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGA 252
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 253 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 309
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 310 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPIRR---QTMLFSATQT 366
>gi|194222171|ref|XP_001916624.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Equus caballus]
Length = 623
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 150 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 207
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 208 LILSPTRELAMQTFGVLKELMTHHIHTY-GLIMGGSNRSAEAQKLANGINIIVATPGRLL 266
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 267 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 323
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 324 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 373
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 374 ----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQFCN 426
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 427 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 486
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 487 ELGFLRYLKQSKVPLSE--------------FEFSWSKISD---------IQSQLEKLIE 523
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 524 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 574
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 150 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 207
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 208 LILSPTRELAMQTFGVLKELMTHHIHTY-GLIMGGSNRSAEAQKLANGINIIVATPGRLL 266
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 267 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT-- 321
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 322 --------------------------------RKVEDLARISLKKEPLYVGV-------- 341
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D + T D L +Q ++V P + R + L +F+
Sbjct: 342 -------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL--- 373
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 374 ----KKNRKKKLMVFFSSCKSVKYHYELLN 399
>gi|426336942|ref|XP_004031710.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Gorilla gorilla
gorilla]
Length = 670
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLAQVALSFGFKVPPFV 621
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|451856883|gb|EMD70174.1| MAPK protein MPS1 [Cochliobolus sativus ND90Pr]
Length = 1051
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 272/478 (56%), Gaps = 50/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L ++R K ++G
Sbjct: 590 MGFEKMTEIQQKTIPPLLSGRDVLGAAKTGSGKTLAFLIPAIEMLSQLRFK--PRNGTGV 647
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + L GG +E ++RKG+++++ATPGRLL
Sbjct: 648 IVVSPTRELALQIFGVARELMSNHSQTF-GILIGGANRSAEAEKLRKGLNLIIATPGRLL 706
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +T+ F + L++DEADRIL+ G+E ++ ++IL ++ Q++L SAT T
Sbjct: 707 DHLHNTQGFVFKNLRSLIIDEADRILEVGFEDEMRSIIKILPTER---QTMLFSATQTTK 763
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T L +Q +++ R L SF+
Sbjct: 764 VEDLARISLKPGPLYINV-DYRAEHSTVQGL------EQGYVLCDSDTRFRLLFSFL--- 813
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ ++ K++VF+++ D+++ELL+ + ++ LHG + Q RT F F +
Sbjct: 814 ----KKHQKKKVIVFLSSCASVDFYSELLNYI---DLPVLGLHGKLKQQARTNRFFEFVN 866
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
+SG LICTDVAARGLD+P VDW++Q+ P DY+HRVGRTAR + +G SL+FL+PS
Sbjct: 867 AQSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLLPS 926
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L+ R+ + E +L +L++ Q E+ +
Sbjct: 927 EVGFLKLLKENRVPLVEFELPS--NKILNI---------------------QSQLEALIS 963
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ L+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P + +G
Sbjct: 964 KNYYLNKSAKDGYRSYLQSYASHS--LRSVFDVHKLDLVKVAKSFGFSTPPRIDISLG 1019
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L ++R K ++G
Sbjct: 590 MGFEKMTEIQQKTIPPLLSGRDVLGAAKTGSGKTLAFLIPAIEMLSQLRFK--PRNGTGV 647
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + L GG +E ++RKG+++++ATPGRLL
Sbjct: 648 IVVSPTRELALQIFGVARELMSNHSQTF-GILIGGANRSAEAEKLRKGLNLIIATPGRLL 706
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +T+ F + L++DEADRIL+ G+E ++ ++IL ++ Q++L SAT T
Sbjct: 707 DHLHNTQGFVFKNLRSLIIDEADRILEVGFEDEMRSIIKILPTER---QTMLFSATQT 761
>gi|301775045|ref|XP_002922942.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Ailuropoda
melanoleuca]
gi|281344914|gb|EFB20498.1| hypothetical protein PANDA_011982 [Ailuropoda melanoleuca]
Length = 669
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 196 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 253
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 254 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVATPGRLL 312
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 313 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 369
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 370 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 419
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 420 ----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQFCN 472
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 473 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 532
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 533 ELGFLRYLKQSKVPLSE--------------FEFSWSKISD---------IQSQLEKLIE 569
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 570 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 620
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 196 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 253
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 254 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVATPGRLL 312
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 313 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT-- 367
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 368 --------------------------------RKVEDLARISLKKEPLYVGV-------- 387
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D + T D L +Q ++V P + R + L +F+
Sbjct: 388 -------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL--- 419
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 420 ----KKNRKKKLMVFFSSCKSVKYHYELLN 445
>gi|76675332|ref|XP_597469.2| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 1 [Bos taurus]
gi|297471793|ref|XP_002685472.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|296490513|tpg|DAA32626.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Bos taurus]
Length = 671
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 255
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 314
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 315 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 371
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 372 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 421
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 422 ----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQFCN 474
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 475 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 534
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 535 ELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 571
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 572 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 622
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 255
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 314
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 315 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT-- 369
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 370 --------------------------------RKVEDLARISLKKEPLYVGV-------- 389
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D + T D L +Q ++V P + R + L +F+
Sbjct: 390 -------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL--- 421
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 422 ----KKNRKKKLMVFFSSCKSVKYHYELLN 447
>gi|225559047|gb|EEH07330.1| ATP-dependent RNA helicase HAS1 [Ajellomyces capsulatus G186AR]
Length = 631
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 199/588 (33%), Positives = 307/588 (52%), Gaps = 67/588 (11%)
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELLST---KKKIKKLKEYNIDPDNYEIPKKT 354
LGK NE+E + L T D A+ EL + +K KE +D D K T
Sbjct: 70 LGKIAKANEEEPDREL---ETTDEAE-QVELPQSSAGEKDGDADKEQEVDSDEEGEEKPT 125
Query: 355 EVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQ 414
KS + ++P+V L P +EA P + E MK + M
Sbjct: 126 NGKSNEVQL------ELPSVNAVSL-PQTEA--EPQKFSELNLSDKTMKAIAD--MKFET 174
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G +++ P
Sbjct: 175 MTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGVIVVSP 232
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLLDH ++
Sbjct: 233 TRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQN 291
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T V+ LA
Sbjct: 292 TQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE--DRQTMLFSATQTTKVEDLA 349
Query: 595 GMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
++L Q P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 350 RISLRQGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL-------K 395
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F + G
Sbjct: 396 RNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNATQGT 452
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLV 772
LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL PSEV +
Sbjct: 453 LICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPSEVGFL 512
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
+ L+ R+ + V+ + R+ + +Q E + Q L
Sbjct: 513 KHLKEARVPV--------------VEFDFPAKRIVN---------VQSQLEKLIGQNYYL 549
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 550 NKSAKDGYRSYLQAYASHS--LRSVFDVHKLDLVKVAKSFGFPTPPRV 595
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 170 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 227
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 228 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 286
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 287 DHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE--DRQTMLFSATQT 342
>gi|119890683|ref|XP_001249975.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|297473570|ref|XP_002686695.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|296488716|tpg|DAA30829.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10-like [Bos taurus]
Length = 671
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 255
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 314
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 315 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 371
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 372 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 421
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 422 ----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQFCN 474
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 475 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 534
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 535 ELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 571
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 572 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 622
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 255
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 314
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 315 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT-- 369
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 370 --------------------------------RKVEDLARISLKKEPLYVGV-------- 389
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D + T D L +Q ++V P + R + L +F+
Sbjct: 390 -------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL--- 421
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 422 ----KKNRKKKLMVFFSSCKSVKYHYELLN 447
>gi|281208736|gb|EFA82911.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 698
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 268/487 (55%), Gaps = 50/487 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q +I P+L+G D+L ++TGSGKTLA+ IP I+ L ++ ++G
Sbjct: 212 MKFTKMTPIQAKTIMPLLEGRDLLGAARTGSGKTLAFLIPAIEIL--VKANFKPRNGTGV 269
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + T + G ++E R+ KG+++LV TPGRLL
Sbjct: 270 IIISPTRELALQIYGVARELMLNHTQTHGLVIGGNNDKRAEIERLEKGVNLLVCTPGRLL 329
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T ++ LV+DEADRIL+ G+E D+ + +++L K++ Q++L SAT T
Sbjct: 330 DHLQNTRGFIVKNLKCLVIDEADRILEVGFEEDMHQIVKLLPKER---QTMLFSATQTRK 386
Query: 590 VQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V +A ++ + P+ + D ++ + L+Q ++V P + R + L +F+
Sbjct: 387 VDDIARVSFNKEPVYVGVDDDREVSTV-------EGLEQGYVVCPSEKRFLLLYTFL--- 436
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+N+ K++VF+++ + YH ELL+ + I + HG Q +RT F F +
Sbjct: 437 KKNLNK----KVIVFLSSCNSVKYHAELLNFI---GIPVLEFHGKQKQQKRTNTFYEFVN 489
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+LICTDVAARG+D+P VDWI+Q+ P +Y+HRVGRTAR VG +G +LLFL+P
Sbjct: 490 AEKGILICTDVAARGVDIPSVDWIIQFDPPDDPKEYIHRVGRTARGVGKKGRALLFLLPQ 549
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ ++ L+ ++ + E + + + +Q E V
Sbjct: 550 ELTFLKYLKLAKVPLNEYEFP-----------------------QKKVSNVQDQLEKLVA 586
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA Y S++ YAS+S L+ FN + L A +F ++ P ++ I P
Sbjct: 587 NNYYLHNSARDAYKSYIHSYASHS--LKDTFNVNSLDLASVALAFGFQNPPKIVFNIA-P 643
Query: 888 KNKEELK 894
K E K
Sbjct: 644 SVKSEKK 650
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q +I P+L+G D+L ++TGSGKTLA+ IP I+ L ++ ++G
Sbjct: 212 MKFTKMTPIQAKTIMPLLEGRDLLGAARTGSGKTLAFLIPAIEIL--VKANFKPRNGTGV 269
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + T + G ++E R+ KG+++LV TPGRLL
Sbjct: 270 IIISPTRELALQIYGVARELMLNHTQTHGLVIGGNNDKRAEIERLEKGVNLLVCTPGRLL 329
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T ++ LV+DEADRIL+ G+E D+ + +++L K++ Q++L SAT T
Sbjct: 330 DHLQNTRGFIVKNLKCLVIDEADRILEVGFEEDMHQIVKLLPKER---QTMLFSATQT 384
>gi|68468064|ref|XP_721871.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
gi|74656630|sp|Q5AK59.1|HAS1_CANAL RecName: Full=ATP-dependent RNA helicase HAS1
gi|46443813|gb|EAL03092.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
Length = 565
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 276/485 (56%), Gaps = 50/485 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 126 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 183
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 184 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 242
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + Q S+L SAT T
Sbjct: 243 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQ--SMLFSATQTTK 299
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D+ D L+Q ++V R + L SF+
Sbjct: 300 VEDLARISLRPGPLYINVVPEKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL--- 349
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + +++ELL+ + ++ LHG Q +RT F F +
Sbjct: 350 KRNVKK----KIIVFLSSCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 402
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 403 AKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 462
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A N+++ T L +
Sbjct: 463 ELGFLRYLKAAKVPLNE--------------YEFPANKIA--NIQSQLTKL-------IK 499
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+L+ SA GY ++++ YAS+ L+ ++ ++ L + SF L P V IG
Sbjct: 500 TNYLLNQSAKDGYRAYLQAYASHG--LKTVYQIDKLDLKKVSASFGLDQVPRVNLSIGGT 557
Query: 888 KNKEE 892
K K++
Sbjct: 558 KTKKQ 562
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 126 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 183
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 184 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 242
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 243 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENR--QSMLFSATQT 297
>gi|238882849|gb|EEQ46487.1| hypothetical protein CAWG_04842 [Candida albicans WO-1]
Length = 569
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 276/485 (56%), Gaps = 50/485 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 130 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 187
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 188 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 246
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + Q S+L SAT T
Sbjct: 247 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQ--SMLFSATQTTK 303
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D+ D L+Q ++V R + L SF+
Sbjct: 304 VEDLARISLRPGPLYINVVPEKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL--- 353
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + +++ELL+ + ++ LHG Q +RT F F +
Sbjct: 354 KRNV----KKKIIVFLSSCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 406
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 407 AKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 466
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A N+++ T L +
Sbjct: 467 ELGFLRYLKAAKVPLNE--------------YEFPANKIA--NIQSQLTKL-------IK 503
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+L+ SA GY ++++ YAS+ L+ ++ ++ L + SF L P V IG
Sbjct: 504 TNYLLNQSAKDGYRAYLQAYASHG--LKTVYQIDKLDLKKVSASFGLDQVPRVNLSIGGT 561
Query: 888 KNKEE 892
K K++
Sbjct: 562 KTKKQ 566
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 130 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 188 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 247 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENR--QSMLFSATQT 301
>gi|363736126|ref|XP_422125.2| PREDICTED: ATP-dependent RNA helicase DDX18 [Gallus gallus]
Length = 639
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 166 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 223
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 224 IILSPTRELAMQTYGVLKELMNHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVATPGRLL 282
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQTRK 339
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D+ + D L+Q ++V P + R + L +F+
Sbjct: 340 VEDLAKISLKKEPLYVGVDDNKETATV-------DGLEQGYVVCPSEKRFLLLFTFL--- 389
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 390 ----KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQTKRTTTFFQFCN 442
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 443 AESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPE 502
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ R+ + E E S+++D +Q E +
Sbjct: 503 ELGFLRYLKQARVPLSE--------------FEFSWSKISD---------IQSQLEKLIE 539
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y +++R Y S+S L+ I+N + L + SF + P V
Sbjct: 540 KNYFLHKSAQEAYKAYIRAYDSHS--LKQIYNVGNLDLNKVSLSFGFKVPPYV 590
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 166 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 223
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 224 IILSPTRELAMQTYGVLKELMNHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVATPGRLL 282
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 337
>gi|12860207|dbj|BAB31877.1| unnamed protein product [Mus musculus]
Length = 660
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 265/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 185 EEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGT 242
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT ++ +L + GG +E ++ GI+I+VATPGR
Sbjct: 243 GVLILSPTRELAMQTFDVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGR 301
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 302 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D ++ D L+Q ++V P + R + L +F+
Sbjct: 359 RKVEDLARISLKKEPLYVGVDDDKEVATV-------DGLEQGYVVCPSEKRFLLLFTFL- 410
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 411 ------KKNRKKKVMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 461
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 462 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 521
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + + S+++D +Q E
Sbjct: 522 PEELGFLRYLKQSKVPLNQFDF--------------SWSKVSD---------IQSQLEKL 558
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 559 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 611
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 115/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 187 MGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGV 244
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT ++ +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 245 LILSPTRELAMQTFDVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGRLL 303
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 304 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
>gi|68467745|ref|XP_722031.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
gi|46443978|gb|EAL03256.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
Length = 569
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 276/485 (56%), Gaps = 50/485 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 130 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 187
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 188 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 246
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + Q S+L SAT T
Sbjct: 247 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQ--SMLFSATQTTK 303
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D+ D L+Q ++V R + L SF+
Sbjct: 304 VEDLARISLRPGPLYINVVPEKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL--- 353
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + +++ELL+ + ++ LHG Q +RT F F +
Sbjct: 354 KRNV----KKKIIVFLSSCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 406
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 407 AKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 466
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A N+++ T L +
Sbjct: 467 ELGFLRYLKAAKVPLNE--------------YEFPANKIA--NIQSQLTKL-------IK 503
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+L+ SA GY ++++ YAS+ L+ ++ ++ L + SF L P V IG
Sbjct: 504 TNYLLNQSAKDGYRAYLQAYASHG--LKTVYQIDKLDLKKVSASFGLDQVPRVNLSIGGT 561
Query: 888 KNKEE 892
K K++
Sbjct: 562 KTKKQ 566
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 130 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 188 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 247 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENR--QSMLFSATQT 301
>gi|241956021|ref|XP_002420731.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223644073|emb|CAX41816.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 556
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 276/485 (56%), Gaps = 50/485 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 117 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 174
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 175 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLSKGVNLLVATPGRLL 233
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + Q S+L SAT T
Sbjct: 234 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQ--SMLFSATQTTK 290
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D+ D L+Q ++V R + L SF+
Sbjct: 291 VEDLARISLRPGPLYINVVPEKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL--- 340
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + +++ELL+ + ++ LHG Q +RT F F +
Sbjct: 341 KRNVKK----KIIVFLSSCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 393
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 394 AKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 453
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A N+++ T L +
Sbjct: 454 ELGFLRYLKAAKVPLNE--------------YEFPANKIA--NIQSQLTKL-------IK 490
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+L+ SA GY ++++ YAS+ L+ ++ ++ L + SF L P V IG
Sbjct: 491 TNYLLNQSAKDGYRAYLQAYASHG--LKTVYQIDKLDLKKVSASFGLDQVPRVNLSIGGT 548
Query: 888 KNKEE 892
K K++
Sbjct: 549 KTKKQ 553
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 117 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 174
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 175 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLSKGVNLLVATPGRLL 233
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 234 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENR--QSMLFSATQT 288
>gi|426221192|ref|XP_004004794.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Ovis aries]
Length = 670
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 255 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 313
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 314 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 370
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 371 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 420
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 421 ----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVMAIHGRQKQNKRTTTFFQFCN 473
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 474 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 533
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 534 ELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 570
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 571 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 255 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIVVATPGRLL 313
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 314 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT-- 368
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 369 --------------------------------RKVEDLARISLKKEPLYVGV-------- 388
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D + T D L +Q ++V P + R + L +F+
Sbjct: 389 -------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL--- 420
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 421 ----KKNRKKKLMVFFSSCKSVKYHYELLN 446
>gi|344290046|ref|XP_003416750.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Loxodonta africana]
Length = 670
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 264/474 (55%), Gaps = 52/474 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPVRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++L+ D H T D L +Q ++V + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDDDKAHATVDGL------EQGYVVCASEKRFLLLFTFL-- 420
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 -----KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQFC 472
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIP 766
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 473 NADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRP 532
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 533 EELGFLRYLKQSKVPLSEF--------------EFSWSKISD---------IQSQLEQLI 569
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 570 EKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPEVALSFGFKVPPFV 621
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 161/332 (48%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T+ V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTYHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPVRR---QTMLFSATQT 368
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 369 ----------------------------------RKVEDLARISLKKEPLYVGV------ 388
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D H T D L+Q ++V + R + L +F+
Sbjct: 389 ---------------------DDDKAHATV------DGLEQGYVVCASEKRFLLLFTFL- 420
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 421 ------KKNRKKKLMVFFSSCKSVKYHYELLN 446
>gi|440292099|gb|ELP85341.1| ATP-dependent RNA helicase HAS1, putative [Entamoeba invadens IP1]
Length = 566
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 276/487 (56%), Gaps = 49/487 (10%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +TT+Q+ + +L G DVL +++TGSGKTLAY +P++ L ++ K + ++G A+I
Sbjct: 126 FTFMTTIQERTAPLLLTGRDVLAKARTGSGKTLAYLVPVLDLLNKI--KFTSRNGTGAII 183
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
I PTRELALQ E+ KL ++ + + L GG K ++ + G ++VATPGRLLDH
Sbjct: 184 ISPTRELALQIYEVLEKLMQN-SERSKALLIGGNPKKKDEEVLENGACVVVATPGRLLDH 242
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
+T F ++ LV+DEADRIL+ G+E ++ + L L K + Q++L SAT T V+
Sbjct: 243 LSNTRCFLFKNLKCLVIDEADRILEAGFEDEMRQILNRLPKNR---QTMLFSATQTDKVE 299
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
+A ++L++P+ ++ +S+ ++ L+Q +++ K R L +F+
Sbjct: 300 DMANLSLKDPVFVNVEESSTTATSS-------KLQQGYVLVESKDRFRLLYTFL------ 346
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
+ + KM+VFM++ + +++ LL+ + + LHG + Q +RT+VF+ F K+
Sbjct: 347 -RKYKGKKMIVFMSSCNAVKFYSNLLNYI---DTPVLSLHGQLKQDKRTKVFEKFCKTKN 402
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKL 771
+L+ TDVAARGLD+P VDWI+Q P T+Y+HRVGRTAR EG +++FL P+E+ +
Sbjct: 403 CILLTTDVAARGLDIPEVDWIIQMDLPDGPTEYIHRVGRTARADTEGKAVMFLQPTEIAM 462
Query: 772 VEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKI 831
++ ++ ++I + + ++ E +Q E V +
Sbjct: 463 LKYMKEKQIPLTQYEVP-----------------------EKKIANVQQELEKLVAKNVF 499
Query: 832 LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNK 890
LH A + Y S++ Y S+ + + +FN QI + AKSF + + P V ++ + PK+K
Sbjct: 500 LHQDAKEAYKSYLMAYNSHKQ--KDVFNLNQIDVEGLAKSFGMPNPPKVQLAMMKSPKSK 557
Query: 891 EELKNKK 897
+ + ++
Sbjct: 558 DRFEPRR 564
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 112/176 (63%), Gaps = 6/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T +TT+Q+ + +L G DVL +++TGSGKTLAY +P++ L ++ K + ++G A+I
Sbjct: 126 FTFMTTIQERTAPLLLTGRDVLAKARTGSGKTLAYLVPVLDLLNKI--KFTSRNGTGAII 183
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELALQ E+ KL ++ + + L GG K ++ + G ++VATPGRLLDH
Sbjct: 184 ISPTRELALQIYEVLEKLMQN-SERSKALLIGGNPKKKDEEVLENGACVVVATPGRLLDH 242
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+T F ++ LV+DEADRIL+ G+E ++ + L L K + Q++L SAT T
Sbjct: 243 LSNTRCFLFKNLKCLVIDEADRILEAGFEDEMRQILNRLPKNR---QTMLFSATQT 295
>gi|347835985|emb|CCD50557.1| similar to ATP-dependent RNA helicase has1 [Botryotinia fuckeliana]
Length = 510
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 172/477 (36%), Positives = 268/477 (56%), Gaps = 50/477 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E M +T +Q+ I P+L G DVL ++TGSGKTL++ IP ++ L +R K
Sbjct: 46 KALVEDMKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLHSLRFK--P 103
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +++ PTRELALQ + ++ + + GG ++E ++ KG+++L+A
Sbjct: 104 RNGTGVIVVSPTRELALQIFGVAREIMAHHSQTY-GIVMGGANRRAEAEKLAKGVNLLIA 162
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L K Q ++L S
Sbjct: 163 TPGRLLDHLQNTQGFVFKNLKALVIDEADRILEAGFEDEMKQIVKVLPKDDRQ--TMLFS 220
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++L+ P+ I+ D+ H+T + L +Q ++V R + L
Sbjct: 221 ATQTTKVEDLARISLRPGPLYINV-DNKKEHSTVEGL------EQGYVVCDSDKRFLLLF 273
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SF+ + + K++VF ++ YH ELL+ + ++ LHG Q +RT
Sbjct: 274 SFL-------KRNLKKKIIVFFSSCACVKYHAELLNYI---DLPVLDLHGKQKQQKRTNT 323
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSL 761
F F + K G LICTDVAARGLD+P VDW++Q+ P TDY+HRVGRTAR +G SL
Sbjct: 324 FFEFCNAKQGTLICTDVAARGLDIPDVDWVIQFDPPDDPTDYIHRVGRTARGSDGKGRSL 383
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL PSEV + L+ RI + V+ E S++ + +Q
Sbjct: 384 LFLQPSEVGFLTHLKTARIPV--------------VEFEFPASKIVN---------IQSQ 420
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
+ Q L+ SA +GY S+++ YAS+S LR +F+ ++ L AKSF DAP
Sbjct: 421 LSKLIAQNYYLNKSAKEGYKSYLQAYASHS--LRSVFDVGKLDLIKVAKSFGF-DAP 474
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 52 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLHSLRFK--PRNGTGV 109
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + ++ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 110 IVVSPTRELALQIFGVAREIMAHHSQTY-GIVMGGANRRAEAEKLAKGVNLLIATPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L K Q++L SAT T
Sbjct: 169 DHLQNTQGFVFKNLKALVIDEADRILEAGFEDEMKQIVKVLPKDDR--QTMLFSATQT 224
>gi|225455822|ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
[Vitis vinifera]
Length = 580
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 278/523 (53%), Gaps = 57/523 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K +N+ M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L +
Sbjct: 105 KAIND-MGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLYHI--SFMP 161
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G V+I PTRELA+QT + L K T + + GG + E R+ KG ++LVA
Sbjct: 162 RNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTL-GLVIGGSARRGEAERLAKGANLLVA 220
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ + ++ L++DEADRIL+ +E ++ + +++L K++ Q+ L S
Sbjct: 221 TPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKER---QTALFS 277
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++ Q P+ ID D + V + L+Q + V P R V L
Sbjct: 278 ATQTKKVEDLARLSFQTTPVYIDVDDGR-------TKVTNEGLQQGYCVVPSAKRFVLLY 330
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SF+ + K++VF ++ + YH+ELL + + +HG Q +RT
Sbjct: 331 SFL-------KRNLSKKVMVFFSSCNSVKYHSELLRYI---QVDCLDIHGKQKQQKRTST 380
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
F F + G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++L
Sbjct: 381 FFDFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGKKGNAL 440
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFLIP E++ + L+ ++ ++E E D+ +LA+ +Q
Sbjct: 441 LFLIPEELQFLRYLKAAKVPVKE--------------YEYDVKKLAN---------VQSH 477
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E V L+ SA Y S++ Y S+S ++ IFN ++ L A SF P V
Sbjct: 478 LEKLVSNNYYLNKSAKDAYRSYILAYNSHS--MKDIFNVHRLDLQAVASSFCFSSPPKVN 535
Query: 882 SGIGKPKNKEELKNKKM-----AINKEKSF-KQRGNFSKKQML 918
I +K K K+ ++ + +QRG K+Q +
Sbjct: 536 LSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFV 578
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + ++G
Sbjct: 110 MGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLYHI--SFMPRNGTGV 167
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELA+QT + L K T + + GG + E R+ KG ++LVATPGRLL
Sbjct: 168 VVICPTRELAIQTHAVAKDLLKYHTQTL-GLVIGGSARRGEAERLAKGANLLVATPGRLL 226
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEADRIL+ +E ++ + +++L K++ Q+ L SAT T
Sbjct: 227 DHLQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKER---QTALFSATQT 281
>gi|402590069|gb|EJW84000.1| DEAD box polypeptide 18 [Wuchereria bancrofti]
Length = 548
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 277/503 (55%), Gaps = 46/503 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q I+P+L G DV+ ++TGSGKTLA+ IP ++ L ++ K+ ++G
Sbjct: 84 MGFTKMTEIQAKCIEPLLQGRDVIASAKTGSGKTLAFLIPAVELLIKLEWKV--RNGTGV 141
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTREL++QT + +++ + + GG ++E ++ +G+S LVATPGRLL
Sbjct: 142 IVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAETQKLARGVSFLVATPGRLL 201
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ ++ L++DEADRILD G+E ++ + L +L +++ Q++ SAT TP
Sbjct: 202 DHLQNTDDFMVKNLKCLIIDEADRILDIGFEIEMQQILRMLPRKR---QTMFFSATQTPK 258
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V L L +P+++ + + + L L+Q ++V P + R + L +F+
Sbjct: 259 VDELIKAALHTDPVKVGINEIN--LKSGNELATVSGLQQGYVVCPSEKRFLLLFTFL--- 313
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ + YH ELL+ + +I+ +HG Q +RT F +F
Sbjct: 314 ----KKNRDKKVMVFFSSCNSVKYHHELLNYI---DISVQCIHGKQKQQKRTCTFFSFCQ 366
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
KSG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR V G +LL L P
Sbjct: 367 AKSGILLCTDVAARGLDIPQVDWIVQYDPPDEPREYIHRVGRTARGVTGTGHALLILRPE 426
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L++ ++ + E E S++A+ +QM E +
Sbjct: 427 ELGFLRYLKHAKVLLNE--------------YEFSWSKIAN---------IQMQLEKLIE 463
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI-GK 886
Q L+ SA + Y ++R Y S+S L+ IFN + L +KSF P V I K
Sbjct: 464 QNYYLNKSAKEAYKCYIRAYDSHS--LKSIFNVNTLDLIAVSKSFGFSTPPFVDLPISNK 521
Query: 887 PKNKEELKNKKMAINKE-KSFKQ 908
PK K K+ K+FKQ
Sbjct: 522 PKVLVRSKLSGAGYGKKPKAFKQ 544
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 116/179 (64%), Gaps = 5/179 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q I+P+L G DV+ ++TGSGKTLA+ IP ++ L ++ K+ ++G
Sbjct: 84 MGFTKMTEIQAKCIEPLLQGRDVIASAKTGSGKTLAFLIPAVELLIKLEWKV--RNGTGV 141
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTREL++QT + +++ + + GG ++E ++ +G+S LVATPGRLL
Sbjct: 142 IVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAETQKLARGVSFLVATPGRLL 201
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
DH ++T+ ++ L++DEADRILD G+E ++ + L +L +++ Q++ SAT TP
Sbjct: 202 DHLQNTDDFMVKNLKCLIIDEADRILDIGFEIEMQQILRMLPRKR---QTMFFSATQTP 257
>gi|444318663|ref|XP_004179989.1| hypothetical protein TBLA_0C06780 [Tetrapisispora blattae CBS 6284]
gi|387513030|emb|CCH60470.1| hypothetical protein TBLA_0C06780 [Tetrapisispora blattae CBS 6284]
Length = 496
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 174/517 (33%), Positives = 278/517 (53%), Gaps = 56/517 (10%)
Query: 394 EFPGIHPFMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
E P F NL+E ++ T++T VQ +I P+L G DVL ++TGSGKTLA+
Sbjct: 27 EAPETTAFADLNLSEPTLKAIGKLDFTEMTAVQARTIPPLLAGRDVLGAAKTGSGKTLAF 86
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
IP I+ L + K ++G ++I PTRELALQ + +L + F + GG
Sbjct: 87 LIPAIEMLHSL--KFKPRNGTGVIVITPTRELALQIFGVARELME-FHSQTFGIVIGGAN 143
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+ E ++ KG++IL+ATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ +
Sbjct: 144 RRQEADKLVKGVNILIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQI 203
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSL 625
++IL + QS+L SAT T V+ LA ++L+ P+ I+ D D L
Sbjct: 204 IKILPNE--DRQSMLFSATQTTKVEDLARISLRKGPLFINVVPENDTSTA-------DGL 254
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENI 685
+Q ++V R + L SF+ +++ K++VF+++ + Y+ ELL+ + ++
Sbjct: 255 EQGYVVCESDKRFLLLFSFL-------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DL 304
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
+LHG Q +RT F F + + G+L+CTDVAARGLD+P VDWI+Q+ P DY+
Sbjct: 305 PVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYI 364
Query: 746 HRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
HRVGRTAR +G SL+FL P+E+ + L+ ++ + E E +
Sbjct: 365 HRVGRTARGTKGKGKSLMFLTPNELGFLRYLKAAKVPLNE--------------YEFPTN 410
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
++A+ +Q E + LH +A GY S+++ YAS+S L+ ++ ++
Sbjct: 411 KIAN---------VQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLD 459
Query: 865 LGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAIN 901
L AKS+ P V IG +K +K N
Sbjct: 460 LAKVAKSYGFSIPPKVNITIGASGKTPSVKKRKTHRN 496
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++ T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 50 LDFTEMTAVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGTGV 107
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 108 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLVKGVNILIATPGRLL 166
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 167 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNE--DRQSMLFSATQT 222
>gi|448121647|ref|XP_004204262.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
gi|358349801|emb|CCE73080.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 272/494 (55%), Gaps = 49/494 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 132 LGFSKMTEVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 189
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 190 IIISPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 248
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 249 DHLQNTKGFVFRNLKALVIDEADRILEIGFEEEMRQIIKILPNEDRQ--SMLFSATQTTK 306
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA M+L+ P+ I+ A S + +T D L +Q ++V R + L SF+
Sbjct: 307 VEDLARMSLRPGPLYINVA-SEAVASTADGL------EQGYVVCDSDKRFLLLFSFL--- 356
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+ + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 357 KRNI----KKKVIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 409
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G +G SLLFL PS
Sbjct: 410 AKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTGGKGKSLLFLAPS 469
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E + D +++A+ +Q +
Sbjct: 470 ELGFLRYLKAANVPLNEYEFPD--------------NKIAN---------IQSQLNKLIK 506
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA GY ++++ YAS+ L+ ++ ++ L A+SF P V IG
Sbjct: 507 SNYWLHQSAKDGYRAYLQAYASHH--LKTVYQIDRLDLVKVARSFGFEVPPKVNITIGTS 564
Query: 888 KNKEELKNKKMAIN 901
E K+KK N
Sbjct: 565 GKSLEKKHKKQKRN 578
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 132 LGFSKMTEVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 189
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 190 IIISPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 248
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 249 DHLQNTKGFVFRNLKALVIDEADRILEIGFEEEMRQIIKILPNEDR--QSMLFSATQT 304
>gi|343425302|emb|CBQ68838.1| probable HAS1-helicase associated with Set1p [Sporisorium reilianum
SRZ2]
Length = 572
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 269/484 (55%), Gaps = 58/484 (11%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+ M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L + K ++G
Sbjct: 66 DAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRL--KFKPRNGT 123
Query: 468 YAVIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
A+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VA
Sbjct: 124 GAIIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVA 178
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL Q S+L S
Sbjct: 179 TPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNGNRQ--SMLFS 236
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T VQ LA ++L+ P+ I+ D+ +T S L+Q ++V R + L
Sbjct: 237 ATQTTKVQDLARISLRPGPLYINV--HADLAASTVS-----RLEQGYVVCDSDRRFLLLF 289
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ K++VFM++ + YH++LL+ + ++ LHG Q +RT
Sbjct: 290 TFL-------KKNAGKKIIVFMSSCNSVKYHSDLLNFI---DVPVLDLHGKQKQQKRTNT 339
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F + + SG L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G+ G SLL
Sbjct: 340 FFEYCNAPSGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNSGKSLL 399
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
FL+P+E+ + L+ ++ + E D + N+ +G L +L N
Sbjct: 400 FLLPTELGFLRFLKVAKVPLNEYTFPSDKVANV-----QGQLEKLISKNY---------- 444
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
LH SA Y S+++ Y SYS L+ IF+ ++ L AK++ P V
Sbjct: 445 ---------YLHQSARDSYRSYLQAYGSYS--LKRIFDIHKLDLAKVAKAYGFAVPPKVN 493
Query: 882 SGIG 885
IG
Sbjct: 494 ITIG 497
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L + K ++G A
Sbjct: 68 MGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRL--KFKPRNGTGA 125
Query: 61 VIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VATP
Sbjct: 126 IIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVATP 180
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL QS+L SAT
Sbjct: 181 GRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNGNR--QSMLFSAT 238
Query: 177 LT 178
T
Sbjct: 239 QT 240
>gi|389638792|ref|XP_003717029.1| ATP-dependent RNA helicase HAS1 [Magnaporthe oryzae 70-15]
gi|152032523|sp|A4R8B5.2|HAS1_MAGO7 RecName: Full=ATP-dependent RNA helicase HAS1
gi|351642848|gb|EHA50710.1| ATP-dependent RNA helicase HAS1 [Magnaporthe oryzae 70-15]
Length = 587
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 278/511 (54%), Gaps = 53/511 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 128 EEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGT 185
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGR
Sbjct: 186 GVIVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGR 244
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT T
Sbjct: 245 LLDHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQT 300
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ ++ + + + L+Q ++V R + L SF+
Sbjct: 301 TKVEDLARVSLRPGPLYLNVDEEKEYSTV-------EGLEQGYVVCEADKRFILLFSFL- 352
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ ++ K++VF ++ + Y+ ELL+ + + LHG Q +RT F F
Sbjct: 353 ------QKMKKKKIIVFFSSCNSVKYYAELLNYI---DCQVLDLHGKQKQQKRTNTFFEF 403
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL+
Sbjct: 404 CNADRGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTNKKGRSLMFLL 463
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV + L+ R+ + E D + NV Q E
Sbjct: 464 PSEVGFLTYLKQARVPVVEF----------------DFPTKSIKNV-------QSQLEKL 500
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + L++SA G+ S++ YAS+S LR +F+ ++ L AKSF P V +G
Sbjct: 501 IGKNYYLNSSAKDGFRSYLHAYASHS--LRSVFDINKLDLAKVAKSFGFATPPRVDIQLG 558
Query: 886 KPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
+K++ + A + +Q G + K++
Sbjct: 559 ASMSKDKKAGGRRAYGSQP--RQGGTYGKRR 587
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 32/244 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 130 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGTGV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 188 IVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT
Sbjct: 247 DHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQTTK 302
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR--ILDQGYERDIAEFLEIL 222
L P + E ++S VE L V+ EAD+ IL + FL+ +
Sbjct: 303 VEDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEADKRFIL-------LFSFLQKM 355
Query: 223 KKQK 226
KK+K
Sbjct: 356 KKKK 359
>gi|7022744|dbj|BAA91709.1| unnamed protein product [Homo sapiens]
Length = 670
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMTRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMTRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|348528897|ref|XP_003451952.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Oreochromis niloticus]
Length = 656
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 288/525 (54%), Gaps = 65/525 (12%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+GM +T +Q SI+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 180 KGMGFEHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYKL--KFMPRNGT 237
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATP 525
+I+ PTRELA+QT + +L T V ++ + GG +E ++ G++I+VATP
Sbjct: 238 GVIILSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGVNIVVATP 294
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++T + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT
Sbjct: 295 GRLLDHLQNTPGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSAT 351
Query: 586 LTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V+ LA ++L+ P+ + D+ D D L+Q ++V P + R + L +F
Sbjct: 352 QTRKVEDLARISLKKEPLYVGVDDNKDKATV-------DGLEQGYVVCPSEKRFLLLFTF 404
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++ + K++VF ++ +H ELL+ + ++ +HG Q++RT F
Sbjct: 405 L-------KKNRKKKLMVFFSSCMSVKFHYELLNYI---DLPVMAIHGKQKQTKRTTTFF 454
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLF 763
F + SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL
Sbjct: 455 QFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGIDGRGHALLI 514
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 515 LRPEELGFLRFLKQAKVPLSEF--------------EFSWSKISD---------IQSQLE 551
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP----S 879
+ + LH SA + Y S+VR Y S+S L+ I+N ++L A SF + P +
Sbjct: 552 KLIEKNYYLHKSAQEAYKSYVRAYDSHS--LKQIYNINTLNLPMVALSFGFKVPPYVDLN 609
Query: 880 VISGIG-KPKNKEELK----NKKMAINKEKSFKQ--RGNFSKKQM 917
V SG G KP+ + K + K K FK +G ++Q
Sbjct: 610 VHSGKGAKPQKRGGGGGFGYQKSKNVQKSKIFKHVNKGKGDRRQF 654
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 182 MGFEHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYKL--KFMPRNGTGV 239
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ G++I+VATPGR
Sbjct: 240 IILSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGVNIVVATPGR 296
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 297 LLDHLQNTPGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSATQT 353
>gi|50551911|ref|XP_503430.1| YALI0E01782p [Yarrowia lipolytica]
gi|74634065|sp|Q6C7D2.1|HAS1_YARLI RecName: Full=ATP-dependent RNA helicase HAS1
gi|49649299|emb|CAG79009.1| YALI0E01782p [Yarrowia lipolytica CLIB122]
Length = 605
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 269/477 (56%), Gaps = 49/477 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L+++ K ++G
Sbjct: 149 MGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKL--KFKPRNGTGV 206
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + L + + + + GG + E+ ++ KG+++LV TPGRLL
Sbjct: 207 IVVSPTRELALQIYGVARDLMANHSQTL-GIVIGGNNRRQEEEKLNKGVNLLVCTPGRLL 265
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++++ F ++ L++DEADRIL+ G+E+++ E ++IL K++ QS+L SAT T
Sbjct: 266 DHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKER---QSMLFSATQTTK 322
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ D HN + + + L+Q ++V R + L SF+
Sbjct: 323 VEDLARISLKKGPLYLN----VDEHNVSST---AEGLEQGYVVCDSDKRFLLLFSFL--- 372
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF+++ + ++ ELL+ + ++ LHG Q +RT F F +
Sbjct: 373 ----KRNAGKKIIVFLSSCNSVKFYGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFIN 425
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
K GVLICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G S++FL PSE
Sbjct: 426 AKQGVLICTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARGSASGKSIMFLTPSE 485
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L+ ++ + E + + ++A+ +Q E +
Sbjct: 486 LGFLRYLKAAKVPLNEYEFPN--------------KKIAN---------VQSQLEKLISS 522
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
L+TSA GY ++++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 523 NYWLNTSAKDGYRAYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFNVPPKVNISIG 577
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 117/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L+++ K ++G
Sbjct: 149 MGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKL--KFKPRNGTGV 206
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L + + + + GG + E+ ++ KG+++LV TPGRLL
Sbjct: 207 IVVSPTRELALQIYGVARDLMANHSQTL-GIVIGGNNRRQEEEKLNKGVNLLVCTPGRLL 265
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++++ F ++ L++DEADRIL+ G+E+++ E ++IL K++ QS+L SAT T
Sbjct: 266 DHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKER---QSMLFSATQT 320
>gi|396465336|ref|XP_003837276.1| similar to ATP-dependent RNA helicase dbp7 [Leptosphaeria maculans
JN3]
gi|312213834|emb|CBX93836.1| similar to ATP-dependent RNA helicase dbp7 [Leptosphaeria maculans
JN3]
Length = 841
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 307/620 (49%), Gaps = 111/620 (17%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAPTSY---EEFP-----GIHPFMKKNLNEGMNI 412
ISSLF NP P + +P +A P++ EE GI + +L + M +
Sbjct: 143 ISSLFTYNPVSKTKPEAKEQPSDDAPVEPSNAPLSEELATFTSLGISTTLAAHLLKKMEL 202
Query: 413 TQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK---------IS 462
T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E+ +
Sbjct: 203 KAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANLKKQQADKNVQ 262
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEKAR+RKGI+ILV
Sbjct: 263 RSSGLFAIIMAPTRELSKQIALVLEKLLGCAHWLVATTVIGGEKKKSEKARLRKGINILV 322
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL----------EILKK 572
ATPGRLLDH +HTETL S V LVLDE DR+++ G+E+DI + +I ++
Sbjct: 323 ATPGRLLDHLEHTETLDVSNVRWLVLDEGDRLMELGFEQDIQRIVGALNLRMRATKIGQQ 382
Query: 573 QKPQF----QSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS-----LVIPD 623
+ P ++L SAT+ V+RL ++L++ + I A S ++ P
Sbjct: 383 RIPGLPEKRTAVLCSATMKMDVERLGQISLKDAVHIRADPSEQDQKVGEAREEQGFFAPA 442
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL-- 681
LKQ + V PKLRLV+L S++ K + K +VFM+ D D+H ++L++ L
Sbjct: 443 QLKQSYAVVAPKLRLVSLMSYL--KRAFARKGSVMKAIVFMSCADSVDFHFDILTSKLTP 500
Query: 682 ------------------GENIAFFKLHGSMSQ---------------SERTEVFKTFR- 707
EN K S+ S +T +R
Sbjct: 501 DSDKIEEKTRDTSDSSSDTENKKPKKTKASLQSDPTKLSVTDAIAPILSTKTHNVTAYRL 560
Query: 708 ------SVKSGVLI--------CTDVA----ARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
S+++ L C +A +RGLDLP VD +V++ + D++HR+G
Sbjct: 561 HGSLQQSLRTSTLAHFAKNKEPCVLIATDVASRGLDLPNVDLVVEFDPAFAREDHLHRIG 620
Query: 750 RTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD--LSR- 805
RTAR G +G + +FL+P E VE L++ R KD + + E D L+R
Sbjct: 621 RTARAGRDGRACIFLMPGCEEGYVEVLKSDR--------KDTEAGVHISRQEADEILNRG 672
Query: 806 LADGNVETA------ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
L V AT LQ++ E L +A + + S VR YA++ D R F+
Sbjct: 673 LVTSGVPGKNAYMDLATDLQLNIERWALASPARLEAARRAFQSHVRAYATHVADERKYFD 732
Query: 860 FKQIHLGHFAKSFALRDAPS 879
K +HLGH AK+FALR+ PS
Sbjct: 733 IKSLHLGHLAKAFALRERPS 752
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 161/309 (52%), Gaps = 35/309 (11%)
Query: 1 MNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK-------- 51
M + T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E+
Sbjct: 200 MELKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANLKKQQADK 259
Query: 52 -ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGIS 110
+ R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEKAR+RKGI+
Sbjct: 260 NVQRSSGLFAIIMAPTRELSKQIALVLEKLLGCAHWLVATTVIGGEKKKSEKARLRKGIN 319
Query: 111 ILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 170
ILVATPGRLLDH +HTETL S V LVLDE DR+++ G+E+DI + L + ++
Sbjct: 320 ILVATPGRLLDHLEHTETLDVSNVRWLVLDEGDRLMELGFEQDIQRIVGALNL---RMRA 376
Query: 171 ILLSATLTPA------TCWCKHTETLKFSKVEHLVLDEADRILDQGYERD--IAE----- 217
+ P C T + ++ + L +A I E+D + E
Sbjct: 377 TKIGQQRIPGLPEKRTAVLCSATMKMDVERLGQISLKDAVHIRADPSEQDQKVGEAREEQ 436
Query: 218 --FLEILKKQK-----PQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIH-NTTD 269
F KQ P+ + V L + L A R G ++ + + ADS D H +
Sbjct: 437 GFFAPAQLKQSYAVVAPKLRLVSLMSYLKRAFAR-KGSVMKAIVFMSCADSVDFHFDILT 495
Query: 270 SLVIPDSLK 278
S + PDS K
Sbjct: 496 SKLTPDSDK 504
>gi|114580554|ref|XP_515753.2| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 3 [Pan
troglodytes]
gi|410222574|gb|JAA08506.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
gi|410256514|gb|JAA16224.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
gi|410298538|gb|JAA27869.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
gi|410336501|gb|JAA37197.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
Length = 670
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|332252169|ref|XP_003275228.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Nomascus leucogenys]
Length = 671
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 255
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 256 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 312
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 313 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 369
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 370 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 421
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 422 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 472
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 473 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 532
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 533 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 569
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 570 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 622
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 198 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 255
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 256 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 312
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 313 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 369
>gi|397496717|ref|XP_003819175.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Pan paniscus]
Length = 670
Score = 275 bits (703), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|448124024|ref|XP_004204815.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
gi|358249448|emb|CCE72514.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 275 bits (703), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 269/494 (54%), Gaps = 49/494 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 132 LGFSKMTEVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 189
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 190 IIISPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 248
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 249 DHLQNTKGFVFRNLKALVIDEADRILEIGFEEEMRQIIKILPNEDRQ--SMLFSATQTTK 306
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA M+L+ P+ I+ A + D L+Q ++V R + L SF+
Sbjct: 307 VEDLARMSLRPGPLYINVASEA-------AASTADGLEQGYVVCDSDKRFLLLFSFL--- 356
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+ + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 357 KRNIKK----KIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 409
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G +G SLLFL PS
Sbjct: 410 AKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTGGKGKSLLFLAPS 469
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E + D +++A+ +Q +
Sbjct: 470 ELGFLRYLKAANVPLNEYEFPD--------------NKIAN---------IQSQLNKLIK 506
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA GY ++++ YAS+ L+ ++ ++ L A+SF P V IG
Sbjct: 507 SNYWLHQSAKDGYRAYLQAYASHH--LKTVYQIDRLDLVKVARSFGFEVPPKVNITIGTS 564
Query: 888 KNKEELKNKKMAIN 901
E K+KK N
Sbjct: 565 GKSLEKKHKKQKRN 578
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 132 LGFSKMTEVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 189
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 190 IIISPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 248
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 249 DHLQNTKGFVFRNLKALVIDEADRILEIGFEEEMRQIIKILPNEDR--QSMLFSATQT 304
>gi|12654791|gb|AAH01238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
gi|13097183|gb|AAH03360.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
gi|19353239|gb|AAH24739.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
Length = 670
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|366994590|ref|XP_003677059.1| hypothetical protein NCAS_0F02200 [Naumovozyma castellii CBS 4309]
gi|342302927|emb|CCC70704.1| hypothetical protein NCAS_0F02200 [Naumovozyma castellii CBS 4309]
Length = 508
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 280/513 (54%), Gaps = 51/513 (9%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
PT +++ P +K E M T +T VQ +I P++ G DVL ++TGSGKTLA+ I
Sbjct: 43 PTKFQDLTLSPPTLKAI--EKMGFTTLTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLI 100
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
P I+ L + K ++G ++I PTRELALQ + +L + F + GG +
Sbjct: 101 PAIELLHSL--KFKPRNGTGIIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRR 157
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E ++ KG+++L+ATPGRLLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++
Sbjct: 158 QEADKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMKQIIK 217
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
IL + QS+L SAT T V+ LA ++L + P+ I+ A + D+ D L+Q
Sbjct: 218 ILPNE--DRQSMLFSATQTTKVEDLARISLRKGPLFINVA-------SEDNTSTADGLEQ 268
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
++V R + L SF+ +++ K++VF+++ + Y+ ELL+ + ++
Sbjct: 269 GYVVCDSDKRFLLLFSFL-------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPV 318
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
+LHG Q +RT F F + G+LICTDVAARGLD+P VDWIVQ+ P DY+HR
Sbjct: 319 LELHGKQKQQKRTNTFFEFCNADRGILICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHR 378
Query: 748 VGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
VGRTAR +G SL+FL PSE+ + L+ ++ + E E +++
Sbjct: 379 VGRTARGTKGKGKSLMFLTPSELGFLRYLKAAKVPLNE--------------YEFPTNKI 424
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
A+ +Q E + LH +A GY S+++ YAS+S L+ ++ ++ L
Sbjct: 425 AN---------VQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLA 473
Query: 867 HFAKSFALRDAPSVISGIGKPKNKEELKNKKMA 899
AKS+ P V IG K ++++
Sbjct: 474 KVAKSYGFPIPPKVNITIGASGKTPATKKRRIS 506
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I P++ G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 62 MGFTTLTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGI 119
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 120 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLMKGVNMLIATPGRLL 178
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 179 DHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMKQIIKILPNE--DRQSMLFSATQT 234
>gi|183396419|gb|ACC62099.1| ATP-dependent RNA helicase DDX18 (predicted) [Rhinolophus
ferrumequinum]
Length = 730
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 268/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 257 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAIELIVKL--KFMPRNGTGV 314
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 315 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 371
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 372 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPIRR---QTMLFSATQT 428
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 429 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 480
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 481 ------KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQF 531
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ +G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 532 CNADTGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 591
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 592 PEELGFLRYLKQSKVPLSE--------------FEFSWSKISD---------IQSQLEKL 628
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 629 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 681
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 161/332 (48%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 257 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAIELIVKL--KFMPRNGTGV 314
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 315 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 371
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 372 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPIRR---QTMLFSATQT 428
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 429 ----------------------------------RKVEDLARISLKKEPLYVGV------ 448
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D + T D L +Q ++V P + R + L +F+
Sbjct: 449 ---------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL- 480
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 481 ------KKNRKKKLMVFFSSCKSVKYHYELLN 506
>gi|48146237|emb|CAG33341.1| DDX18 [Homo sapiens]
Length = 610
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 137 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 194
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 195 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 251
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 252 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 308
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 309 RKVEDLARISLKKGPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 360
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 361 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 411
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 412 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 471
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 472 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 508
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 509 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 561
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 137 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 195 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 251
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 252 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 308
>gi|387273435|gb|AFJ70212.1| ATP-dependent RNA helicase DDX18 [Macaca mulatta]
Length = 670
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|395839602|ref|XP_003792676.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Otolemur garnettii]
Length = 675
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 269/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 202 MGFTNMTEIQHKSIKPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 259
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 260 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLVMGGSNRSAEAQKLSNGINIIVATPGR 316
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 317 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 373
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D + T++ V D L+Q ++V P + R + L +F+
Sbjct: 374 RKVEDLARISLKKEPLYVGVDD-----DKTNATV--DGLEQGYVVCPSEKRFLLLFTFL- 425
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 426 ------KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLTVLAIHGKQKQNKRTTTFFQF 476
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 477 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 536
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S++++ +Q E
Sbjct: 537 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISN---------IQSQLEQL 573
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 574 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVHNLNLPQVALSFGFKVPPFV 626
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 161/332 (48%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 202 MGFTNMTEIQHKSIKPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 259
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 260 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLVMGGSNRSAEAQKLSNGINIIVATPGR 316
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 317 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 373
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 374 ----------------------------------RKVEDLARISLKKEPLYVGV------ 393
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D + T D L +Q ++V P + R + L +F+
Sbjct: 394 ---------------------DDDKTNATVDGL------EQGYVVCPSEKRFLLLFTFL- 425
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 426 ------KKNRKKKLMVFFSSCKSVKYHYELLN 451
>gi|38327634|ref|NP_006764.3| ATP-dependent RNA helicase DDX18 [Homo sapiens]
gi|20532388|sp|Q9NVP1.2|DDX18_HUMAN RecName: Full=ATP-dependent RNA helicase DDX18; AltName: Full=DEAD
box protein 18; AltName: Full=Myc-regulated DEAD box
protein; Short=MrDb
gi|119615599|gb|EAW95193.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, isoform CRA_b [Homo
sapiens]
gi|119615600|gb|EAW95194.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, isoform CRA_b [Homo
sapiens]
Length = 670
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|297734151|emb|CBI15398.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 278/523 (53%), Gaps = 57/523 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K +N+ M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L +
Sbjct: 17 KAIND-MGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLYHI--SFMP 73
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G V+I PTRELA+QT + L K T + + GG + E R+ KG ++LVA
Sbjct: 74 RNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTL-GLVIGGSARRGEAERLAKGANLLVA 132
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ + ++ L++DEADRIL+ +E ++ + +++L K++ Q+ L S
Sbjct: 133 TPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKER---QTALFS 189
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++ Q P+ ID D + V + L+Q + V P R V L
Sbjct: 190 ATQTKKVEDLARLSFQTTPVYIDVDDGR-------TKVTNEGLQQGYCVVPSAKRFVLLY 242
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SF+ + K++VF ++ + YH+ELL + + +HG Q +RT
Sbjct: 243 SFL-------KRNLSKKVMVFFSSCNSVKYHSELLRYI---QVDCLDIHGKQKQQKRTST 292
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
F F + G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++L
Sbjct: 293 FFDFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGKKGNAL 352
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFLIP E++ + L+ ++ ++E E D+ +LA+ +Q
Sbjct: 353 LFLIPEELQFLRYLKAAKVPVKE--------------YEYDVKKLAN---------VQSH 389
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E V L+ SA Y S++ Y S+S ++ IFN ++ L A SF P V
Sbjct: 390 LEKLVSNNYYLNKSAKDAYRSYILAYNSHS--MKDIFNVHRLDLQAVASSFCFSSPPKVN 447
Query: 882 SGIGKPKNKEELKNKKM-----AINKEKSF-KQRGNFSKKQML 918
I +K K K+ ++ + +QRG K+Q +
Sbjct: 448 LSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFV 490
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + ++G
Sbjct: 22 MGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLYHI--SFMPRNGTGV 79
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELA+QT + L K T + + GG + E R+ KG ++LVATPGRLL
Sbjct: 80 VVICPTRELAIQTHAVAKDLLKYHTQTL-GLVIGGSARRGEAERLAKGANLLVATPGRLL 138
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEADRIL+ +E ++ + +++L K++ Q+ L SAT T
Sbjct: 139 DHLQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKER---QTALFSATQT 193
>gi|392571723|gb|EIW64895.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 561
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 267/476 (56%), Gaps = 52/476 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L R K ++G
Sbjct: 39 EEMGFKTMTAIQEKAIPPLLAGKDVLGAARTGSGKTLAFLIPAIELLH--RLKFKPRNGT 96
Query: 468 YAVIILPTRELALQTLEIFTKLC--KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+II PTRELALQ + +L S T+ + + GG K E+ +++KG+++L+ATP
Sbjct: 97 GIIIISPTRELALQIFGVAKELMVHHSQTYGI---IMGGANRKEEEIKLQKGVNLLIATP 153
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRL+DH + T+ F ++ LV+DEADRIL+ G+E + + + IL + + QS+L SAT
Sbjct: 154 GRLIDHLEGTKGFVFRNLKCLVIDEADRILEVGFEEQMKKVINILPSE--ERQSMLFSAT 211
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V LA ++L+ P+ +D D ++ +T +L Q ++V P R + L +F
Sbjct: 212 QTTKVTDLARISLRPGPLYVDV-DKQELTSTVSTL------SQGYVVCPSDRRFLLLFTF 264
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++ + KM+VF ++ + YH ELL+ + ++ LHG Q +RT F
Sbjct: 265 L-------KKNMKKKMVVFFSSCNSVKYHAELLNYI---DVPVLDLHGKQKQQKRTTTFF 314
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
F + ++G L+CTDVAARGLD+P VDWI+QY P DY+HRVGRTAR G G SL+FL
Sbjct: 315 EFCNAETGTLLCTDVAARGLDIPRVDWIIQYDPPDDPRDYIHRVGRTARAGKVGKSLMFL 374
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
+PSE+ + L+ ++ + E +++A+ +Q E
Sbjct: 375 LPSELGFLRYLKEAKVPLNEFTFP--------------ANKIAN---------VQSQLEK 411
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA GY S+++ YASYS L+ IF+ Q+ L K+F P V
Sbjct: 412 LLQKNYFLHQSARDGYRSYLQAYASYS--LKKIFDVNQLDLAKVGKAFGFSVPPRV 465
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 114/180 (63%), Gaps = 9/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L R K ++G
Sbjct: 41 MGFKTMTAIQEKAIPPLLAGKDVLGAARTGSGKTLAFLIPAIELLH--RLKFKPRNGTGI 98
Query: 61 VIILPTRELALQTLEIFTKLC--KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+II PTRELALQ + +L S T+ + + GG K E+ +++KG+++L+ATPGR
Sbjct: 99 IIISPTRELALQIFGVAKELMVHHSQTYGI---IMGGANRKEEEIKLQKGVNLLIATPGR 155
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L+DH + T+ F ++ LV+DEADRIL+ G+E + + + IL + + QS+L SAT T
Sbjct: 156 LIDHLEGTKGFVFRNLKCLVIDEADRILEVGFEEQMKKVINILPSE--ERQSMLFSATQT 213
>gi|355751634|gb|EHH55889.1| hypothetical protein EGM_05182 [Macaca fascicularis]
Length = 670
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILH 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLHYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|380817640|gb|AFE80694.1| ATP-dependent RNA helicase DDX18 [Macaca mulatta]
gi|383422527|gb|AFH34477.1| ATP-dependent RNA helicase DDX18 [Macaca mulatta]
Length = 670
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|145230033|ref|XP_001389325.1| ATP-dependent RNA helicase has1 [Aspergillus niger CBS 513.88]
gi|143019625|sp|A2Q9T6.1|HAS1_ASPNC RecName: Full=ATP-dependent RNA helicase has1
gi|134055440|emb|CAK43955.1| unnamed protein product [Aspergillus niger]
Length = 606
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 282/516 (54%), Gaps = 54/516 (10%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
N D+P++ RL P ++ P + E MK + M +T +QQ +I P+
Sbjct: 105 NGADLPSLDAVRL-PQTDG--EPKKFTELNLSEKTMKGI--QDMGFETMTEIQQRTIPPL 159
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ +
Sbjct: 160 LAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVLVVSPTRELALQIFGVA 217
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T F ++ L
Sbjct: 218 RELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTL 276
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 277 VIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYIN 334
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D H+T + L +Q +++ R + L SF+ + + K++VF +
Sbjct: 335 V-DHRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFS 380
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD
Sbjct: 381 SCNCVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLD 437
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P + DYVHRVGRTAR V +G SL+FL PSEV ++ L+ R+ + E
Sbjct: 438 IPAVDWIIQFDPPDDTRDYVHRVGRTARGVNGKGRSLMFLQPSEVGFLKHLKEARVPVVE 497
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
D N + +Q E + Q L+ SA +GY +++
Sbjct: 498 F---DFPANKI--------------------VNVQSQLEKLIGQNYYLNKSAKEGYRAYL 534
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ YAS+S LR +F+ ++ L AK F P +
Sbjct: 535 QAYASHS--LRSVFDVHKLDLVKIAKGFGFSTPPRI 568
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 143 MGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 200
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 201 LVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 259
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 260 DHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 315
>gi|358365362|dbj|GAA81984.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 606
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 283/516 (54%), Gaps = 54/516 (10%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
N D+P++ RL P +++ P + E MK + M +T +QQ +I P+
Sbjct: 105 NGADLPSLDAVRL-PQTDS--EPKKFTELNLSEKTMKGI--QDMGFETMTEIQQRTIPPL 159
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ +
Sbjct: 160 LAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVLVVSPTRELALQIFGVA 217
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T F ++ L
Sbjct: 218 RELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTL 276
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 277 VIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYIN 334
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D H+T + L +Q +++ R + L SF+ + + K++VF +
Sbjct: 335 V-DHRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFS 380
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD
Sbjct: 381 SCNCVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLD 437
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P + DYVHRVGRTAR V +G SL+FL PSEV ++ L+ R+ + E
Sbjct: 438 IPAVDWIIQFDPPDDTRDYVHRVGRTARGVNGKGRSLMFLQPSEVGFLKHLKEARVPVVE 497
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
D N + +Q E + Q L+ SA +GY +++
Sbjct: 498 F---DFPANKI--------------------VNVQSQLEKLIGQNYYLNKSAKEGYRAYL 534
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ YAS+S LR +F+ ++ L AK F P +
Sbjct: 535 QAYASHS--LRSVFDVHKLDLVKIAKGFGFSTPPRI 568
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 143 MGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 200
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 201 LVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 259
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 260 DHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 315
>gi|226289876|gb|EEH45360.1| ATP-dependent RNA helicase HAS1 [Paracoccidioides brasiliensis
Pb18]
Length = 607
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 263/475 (55%), Gaps = 49/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 144 EDMKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGT 201
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGR
Sbjct: 202 GVIVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGR 260
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 261 LLDHLQNTQGFIFRNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 318
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ H S V + L+Q +++ R + L SF+
Sbjct: 319 TKVEDLARISLRPGPLYINVD-----HRKEYSTV--EGLEQGYVICDSDKRFLLLFSFL- 370
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F
Sbjct: 371 ------KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEF 421
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLI 765
+ K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL
Sbjct: 422 CNAKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQ 481
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV ++ L+ R+ + E + S K+ +Q E
Sbjct: 482 PSEVGFLKHLKEARVPVVEF-------DFPSKKI----------------VNVQSQLEKL 518
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ Q L+ SA GY S+++ YAS+S LR +FN ++ L AKSF P V
Sbjct: 519 IGQNYYLNKSAKDGYRSYLQAYASHS--LRSVFNVHKLDLVKVAKSFGFSTPPRV 571
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 146 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 203
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 204 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 262
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 263 DHLQNTQGFIFRNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 318
>gi|31981163|ref|NP_080136.2| ATP-dependent RNA helicase DDX18 [Mus musculus]
gi|56404614|sp|Q8K363.1|DDX18_MOUSE RecName: Full=ATP-dependent RNA helicase DDX18; AltName: Full=DEAD
box protein 18
gi|20380248|gb|AAH28246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|75517578|gb|AAI03777.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|148707837|gb|EDL39784.1| mCG1040626 [Mus musculus]
gi|187954459|gb|AAI41231.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|187954929|gb|AAI41232.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
Length = 660
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 264/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 185 EEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGT 242
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGR
Sbjct: 243 GVLILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGR 301
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 302 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D ++ D L+Q ++V P + R + L +F+
Sbjct: 359 RKVEDLARISLKKEPLYVGVDDDKEVATV-------DGLEQGYVVCPSEKRFLLLFTFL- 410
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 411 ------KKNRKKKVMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 461
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 462 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 521
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + + S+++D +Q E
Sbjct: 522 PEELGFLRYLKQSKVPLNQFDF--------------SWSKVSD---------IQSQLEKL 558
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 559 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 611
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 187 MGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGV 244
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 245 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGRLL 303
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 304 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
>gi|406606941|emb|CCH41663.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 578
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 279/491 (56%), Gaps = 55/491 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 131 MGFEKMTQVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 188
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + + GG ++E+ ++ KG+++L+ATPGRLL
Sbjct: 189 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEEEKLVKGVNLLIATPGRLL 247
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL K + QS+L SAT T
Sbjct: 248 DHLQNTRGFVFKNLKALVIDEADRILEIGFEEEMRQIIKILPKD--ERQSMLFSATQTTK 305
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ DS + ++T D L +Q ++V R + L SF+
Sbjct: 306 VEDLARISLRPGPLFINV-DSKEENSTVDRL------EQGYVVCESDKRFLLLFSFL--- 355
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F +
Sbjct: 356 KRNV----KKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEFIN 408
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL P+
Sbjct: 409 AKQGILICTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARGTTAKGRSLMFLTPN 468
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E L+++A+ +Q E +
Sbjct: 469 ELGFLRYLKAAKVPLNE--------------YEFPLNKIAN---------VQSQLEKLIK 505
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG-- 885
Q LH SA GY S+++ Y+S+ L+ ++ ++ L AKSF + P V IG
Sbjct: 506 QNYWLHQSAKDGYRSYLQAYSSHH--LKTVYQIDKLDLVKVAKSFGFQVPPKVNITIGAS 563
Query: 886 ----KPKNKEE 892
KP N+ +
Sbjct: 564 GKTSKPTNQRK 574
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 131 MGFEKMTQVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 188
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E+ ++ KG+++L+ATPGRLL
Sbjct: 189 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEEEKLVKGVNLLIATPGRLL 247
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL K + QS+L SAT T
Sbjct: 248 DHLQNTRGFVFKNLKALVIDEADRILEIGFEEEMRQIIKILPKD--ERQSMLFSATQT 303
>gi|291391442|ref|XP_002712440.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Oryctolagus
cuniculus]
Length = 665
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 263/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q S++P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 192 MGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 249
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 250 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIIVATPGRLL 308
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 309 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 365
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 366 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 415
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 416 ----KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQFCN 468
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 469 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 528
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E S+++D +Q E +
Sbjct: 529 ELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKLIE 565
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 566 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNSLNLPQVALSFGFKVPPFV 616
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q S++P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 192 MGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 249
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 250 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIIVATPGRLL 308
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 309 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 363
>gi|209881955|ref|XP_002142415.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium muris
RN66]
gi|209558021|gb|EEA08066.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Cryptosporidium
muris RN66]
Length = 506
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 293/545 (53%), Gaps = 66/545 (12%)
Query: 383 SEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
S F+ S+E+ I +K+ L + MNIT +T +Q SI IL+G DVL ++TGSGK
Sbjct: 6 SADFFSNVSFEQ-SAICDQLKRALKD-MNITTMTEIQAKSIPRILEGKDVLGTAKTGSGK 63
Query: 443 TLAYAIPIIQKLQ--EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
TLA+ +P + L E P+ +G ++I PTREL+LQ E+ +LCK +
Sbjct: 64 TLAFLVPAVNLLYNVEFLPR----NGTGVIVISPTRELSLQIYEVCRELCK-YLPQTHGL 118
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
+ GG ++E ++ KG++IL+ATPGRLLDH ++T+ ++ + L++DEADRIL+ G+E
Sbjct: 119 VIGGANRRNEADKLNKGVNILIATPGRLLDHLQNTKGFQYGNLLSLIIDEADRILEIGFE 178
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV 620
++ + +++L ++ Q+ L SAT T V L ++L+NP+ I T+++
Sbjct: 179 EEMNQIIKLLPVKR---QTSLFSATQTTKVADLVRLSLRNPVLIKCK-------TSNTAA 228
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
L+Q +++ R + L +F+ ++ E+K++VF ++ +H EL + V
Sbjct: 229 TVSGLEQGYVIASANERFLLLYTFL-------KKNRENKVMVFFSSCMSTKFHEELFNYV 281
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
+++ +HG QS R + + F S + G+L+CTDVAARGLD+P VDWI+QY P
Sbjct: 282 ---DLSCSSIHGKKKQSSRMQTYYEFCSSEKGLLLCTDVAARGLDIPNVDWIIQYDPPDD 338
Query: 741 STDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVK 798
+Y+HRVGRTAR + G +LLFL+P E++ ++ L+ I + E K+ + N
Sbjct: 339 PKEYIHRVGRTARGANGTGKALLFLLPEEIQFLQYLKKMNIPLNEYAFSKNKIAN----- 393
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
++ L RL + N LH SA Y +++ YAS+S ++ F
Sbjct: 394 VQNQLERLIEKNYH-------------------LHCSARDAYRAYLHSYASHS--IKDTF 432
Query: 859 NFKQIHLGHFAKSFALRDAPSV----ISG--IGKPKNKEELK--NKKMAINKEKSFKQRG 910
N + L AKSF P V SG +G+ KNK L NKK + F
Sbjct: 433 NVYSLDLQQIAKSFGFTTPPKVELNLKSGGKVGR-KNKSNLNLSNKKAYTSSGHKFSASN 491
Query: 911 NFSKK 915
+ K+
Sbjct: 492 PYGKR 496
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ--EMRPKISRKDGI 58
MNIT +T +Q SI IL+G DVL ++TGSGKTLA+ +P + L E P+ +G
Sbjct: 31 MNITTMTEIQAKSIPRILEGKDVLGTAKTGSGKTLAFLVPAVNLLYNVEFLPR----NGT 86
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
++I PTREL+LQ E+ +LCK + + GG ++E ++ KG++IL+ATPGR
Sbjct: 87 GVIVISPTRELSLQIYEVCRELCK-YLPQTHGLVIGGANRRNEADKLNKGVNILIATPGR 145
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T+ ++ + L++DEADRIL+ G+E ++ + +++L ++ Q+ L SAT T
Sbjct: 146 LLDHLQNTKGFQYGNLLSLIIDEADRILEIGFEEEMNQIIKLLPVKR---QTSLFSATQT 202
>gi|216397600|gb|ACJ72832.1| DEAD box polypeptide 18 (predicted) [Oryctolagus cuniculus]
Length = 622
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 263/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q S++P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 149 MGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 206
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 207 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIIVATPGRLL 265
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 266 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRK 322
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 323 VEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 372
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 373 ----KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQFCN 425
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 426 ADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPE 485
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E S+++D +Q E +
Sbjct: 486 ELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKLIE 522
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 523 KNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNSLNLPQVALSFGFKVPPFV 573
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q S++P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 149 MGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 206
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 207 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLANGINIIVATPGRLL 265
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 266 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 320
>gi|350638396|gb|EHA26752.1| hypothetical protein ASPNIDRAFT_51832 [Aspergillus niger ATCC 1015]
Length = 606
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 279/516 (54%), Gaps = 54/516 (10%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
N D+P++ RL P ++ P + E MK + M +T +QQ +I P+
Sbjct: 105 NGADLPSLDAVRL-PQTDG--EPKKFTELNLSEKTMKGI--QDMGFETMTEIQQRTIPPL 159
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ +
Sbjct: 160 LAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVLVVSPTRELALQIFGVA 217
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T F ++ L
Sbjct: 218 RELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTL 276
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 277 VIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYIN 334
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D H+T + L +Q +++ R + L SF+ + + K++VF +
Sbjct: 335 V-DHRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFS 380
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD
Sbjct: 381 SCNCVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLD 437
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P + DYVHRVGRTAR V +G SL+FL PSEV ++ L+ R+ + E
Sbjct: 438 IPAVDWIIQFDPPDDTRDYVHRVGRTARGVNGKGRSLMFLQPSEVGFLKHLKEARVPVVE 497
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
+Q E + Q L+ SA +GY +++
Sbjct: 498 FDFP-----------------------ANKIVNVQSQLEKLIGQNYYLNKSAKEGYRAYL 534
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ YAS+S LR +F+ ++ L AK F P +
Sbjct: 535 QAYASHS--LRSVFDVHKLDLVKIAKGFGFSTPPRI 568
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 143 MGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 200
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 201 LVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 259
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 260 DHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 315
>gi|1498229|emb|CAA67295.1| RNA helicase [Homo sapiens]
Length = 610
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 137 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 194
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 195 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 251
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 252 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 308
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 309 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 360
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 361 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 411
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 412 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 471
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 472 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 508
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 509 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 561
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 137 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 195 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 251
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 252 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 308
>gi|427785565|gb|JAA58234.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 596
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 275/496 (55%), Gaps = 52/496 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
EGM ++T +Q +I +L+G DV+ ++TGSGKTLA+ IP ++ L ++ K ++G
Sbjct: 118 EGMGFKRMTEIQAKTIPHLLEGKDVVAAAKTGSGKTLAFLIPAVELLYKL--KFMPRNGT 175
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A++I PTRELA+QT + +L + + GG +SE +++ KG++ LVATPGR
Sbjct: 176 GALVIAPTRELAMQTFGVLQELLSGQNQTL-GLIMGGTNRQSEASKLAKGVNFLVATPGR 234
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +++ + ++ L++DEADRILD G+E ++ + L IL K++ Q++L SATLT
Sbjct: 235 LLDHLQNSSEFVYKNLQCLIIDEADRILDIGFEEEVKQILRILPKRR---QTMLFSATLT 291
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
+ L + L++ P+ I + N + V + L+Q ++V P R + L +F+
Sbjct: 292 KKTEDLVKVALKSEPLYIGLDE-----NKEQATV--EGLEQGYVVCPSDKRFLLLFTFL- 343
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 344 ------KKNRKKKVMVFFSSCLSVKYHHELLNYI---DLPVMSIHGKQKQAKRTTTFFQF 394
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLI 765
+ +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L
Sbjct: 395 CNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGEGGRGHALLILR 454
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P EV + L+ ++ ++E E +++A+ +Q E
Sbjct: 455 PEEVGFLRYLKVAKVPLQE--------------FEFSWAKIAN---------IQPQLEKL 491
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + LH SA + Y ++VR Y S+ L+ IF+ + L AKSF P+V +G
Sbjct: 492 ISKNYYLHMSAKEAYKAYVRAYDSHH--LKSIFDVNTLDLIQVAKSFGFLVPPNVDLNVG 549
Query: 886 KPKNKEELKNKKMAIN 901
NK + K A N
Sbjct: 550 --SNKARPRKKGRAAN 563
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I +L+G DV+ ++TGSGKTLA+ IP ++ L ++ K ++G A
Sbjct: 120 MGFKRMTEIQAKTIPHLLEGKDVVAAAKTGSGKTLAFLIPAVELLYKL--KFMPRNGTGA 177
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L + + GG +SE +++ KG++ LVATPGRLL
Sbjct: 178 LVIAPTRELAMQTFGVLQELLSGQNQTL-GLIMGGTNRQSEASKLAKGVNFLVATPGRLL 236
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DEADRILD G+E ++ + L IL K++ Q++L SATLT
Sbjct: 237 DHLQNSSEFVYKNLQCLIIDEADRILDIGFEEEVKQILRILPKRR---QTMLFSATLTKK 293
Query: 181 T 181
T
Sbjct: 294 T 294
>gi|213409972|ref|XP_002175756.1| ATP-dependent RNA helicase Has1 [Schizosaccharomyces japonicus
yFS275]
gi|212003803|gb|EEB09463.1| ATP-dependent RNA helicase Has1 [Schizosaccharomyces japonicus
yFS275]
Length = 572
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 276/514 (53%), Gaps = 60/514 (11%)
Query: 400 PFMKKNLN--EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
P +K LN + + ++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L +
Sbjct: 89 PLSEKTLNAIKDIGYEKMTEVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIETLYSL 148
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCK----SFTWIVPSWLTGGEKMKSEKAR 513
K ++G +I+ PTRELALQ + +L K +F ++ GG ++E +
Sbjct: 149 --KFKPRNGTGVIIVSPTRELALQIFGVAKELLKYHHQTFGIVI-----GGANRRAEADK 201
Query: 514 IRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 573
+ KG+++LVATPGRLLDH ++T+ F + L++DEADRIL+ G+E ++ + ++L +
Sbjct: 202 LVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLIIDEADRILEIGFEDEMRQIAKVLPSE 261
Query: 574 KPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVT 632
Q++L SAT T V+ LA ++L+ P+ I+ D D L+Q ++V
Sbjct: 262 --NRQTMLFSATQTTKVEDLARISLRPGPLYINVDAGKDTSTA-------DGLEQGYVVV 312
Query: 633 PPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHG 692
R + L SF+ + + K++VFM++ Y ELL+ + ++ LHG
Sbjct: 313 ESDKRFLLLFSFL-------KRNLKKKVIVFMSSCASVKYMAELLNYI---DLPVLDLHG 362
Query: 693 SMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTA 752
Q RT F F + + G+++CTDVAARGLD+P VDWIVQY P DY+HRVGRTA
Sbjct: 363 KQKQQRRTNTFFEFCNAEKGIMLCTDVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTA 422
Query: 753 RVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
R +G SL+FL PSE+ + L+ ++ + E + +++A+
Sbjct: 423 RGAKGKGRSLIFLTPSELGFLRYLKAAKVPLNEYEFPS--------------NKVAN--- 465
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+Q E V + L SA GY S+++ YASYS L+ IF+ ++ L AKS
Sbjct: 466 ------VQSQLEKLVSKNYYLQQSAKDGYRSYLQAYASYS--LKSIFDINKLDLTKVAKS 517
Query: 872 FALRDAPSVISGIGKPKNKEELKNKKMAINKEKS 905
F PSV IG + + K +K K+ S
Sbjct: 518 FGFATPPSVNITIG-ASGRADKKERKAGYRKKSS 550
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 112/178 (62%), Gaps = 13/178 (7%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G +I+
Sbjct: 105 KMTEVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIETLYSL--KFKPRNGTGVIIVS 162
Query: 65 PTRELALQTLEIFTKLCK----SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
PTRELALQ + +L K +F ++ GG ++E ++ KG+++LVATPGRLL
Sbjct: 163 PTRELALQIFGVAKELLKYHHQTFGIVI-----GGANRRAEADKLVKGVNLLVATPGRLL 217
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F + L++DEADRIL+ G+E ++ + ++L + Q++L SAT T
Sbjct: 218 DHLQNTKGFVFRNLRSLIIDEADRILEIGFEDEMRQIAKVLPSE--NRQTMLFSATQT 273
>gi|326923057|ref|XP_003207758.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Meleagris
gallopavo]
Length = 703
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 230 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 287
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + ++ + GG +E ++ GI+I+VATPGRLL
Sbjct: 288 IILSPTRELAMQTYGVLKEVMNHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVATPGRLL 346
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 347 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQTRK 403
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D+ + D L+Q ++V P + R + L +F+
Sbjct: 404 VEDLARISLKKEPLYVGVDDNKETATV-------DGLEQGYVVCPSEKRFLLLFTFL--- 453
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 454 ----KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQTKRTTTFFQFCN 506
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 507 AESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPE 566
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ R+ + E E S+++D +Q E +
Sbjct: 567 ELGFLRYLKQARVPLSE--------------FEFSWSKISD---------IQSQLEKLIE 603
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y +++R Y S+S L+ I+N + L + SF + P V
Sbjct: 604 KNYFLHKSAQEAYKAYIRAYDSHS--LKQIYNVGNLDLNKVSLSFGFKVPPYV 654
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 230 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 287
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + ++ + GG +E ++ GI+I+VATPGRLL
Sbjct: 288 IILSPTRELAMQTYGVLKEVMNHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVATPGRLL 346
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 347 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 401
>gi|452982809|gb|EME82567.1| hypothetical protein MYCFIDRAFT_163928 [Pseudocercospora fijiensis
CIRAD86]
Length = 481
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 274/502 (54%), Gaps = 49/502 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +QQ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 25 MPFDTMTEIQQRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLHSLRFK--PRNGTGV 82
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 83 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 141
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q ++L SAT T
Sbjct: 142 DHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKEDRQ--TMLFSATQTTK 199
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ DS H+T L +Q + + +R L +F+
Sbjct: 200 VEDLARISLRAGPLYINV-DSRQEHSTVAGL------EQGYTICEADMRFRLLFTFL--- 249
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
K++VF ++ + Y++ELL+ + ++ LHG Q +RT F F +
Sbjct: 250 ----KRHASKKIIVFFSSCNCVKYYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 302
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K+G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL P+
Sbjct: 303 AKNGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGKSLMFLQPN 362
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ ++ + E ++ ++ D +Q E +
Sbjct: 363 EVGFLSHLKEAKVPLVEFEIPS--------------KKILD---------IQSQLEMLIG 399
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA G+ S+++ YAS+S LR +FN +Q+ L AKSF P V +G
Sbjct: 400 KNYYLNKSAKDGFRSYLQAYASHS--LRSVFNIQQLDLKKVAKSFGFPVPPKVDINLGAS 457
Query: 888 KNKEELKNKKMAINKEKSFKQR 909
K + + ++ F +
Sbjct: 458 MKKPDSARRSYGSQPKQKFGNK 479
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 25 MPFDTMTEIQQRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLHSLRFK--PRNGTGV 82
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 83 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 141
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 142 DHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKEDR--QTMLFSATQT 197
>gi|326433585|gb|EGD79155.1| helicase pitchoune [Salpingoeca sp. ATCC 50818]
Length = 649
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 275/510 (53%), Gaps = 53/510 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
EG T +T +Q +I +L G D+L ++TGSGKTLA+ IP +++L+++ K + K+G
Sbjct: 188 EGFGFTHMTEIQYKTIPFLLTGRDLLGAAKTGSGKTLAFLIPAVERLRQL--KFTPKNGT 245
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA Q + L + GG K+E R+ G++ILV TPGR
Sbjct: 246 GCIILTPTRELAQQIYGVLISLLEHHHQ-THGISIGGSDKKAEARRLGNGVNILVCTPGR 304
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T KF +++ L++DEADRIL G+E + + ++ +++ Q++L SAT T
Sbjct: 305 LLDHLQNT-NFKFDRLQMLIIDEADRILQIGFEDTMRAIVRLIPQKR---QTVLFSATQT 360
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I D DI D ++Q +++ P R L +F+
Sbjct: 361 RKVEDLARISLRGEPLYIGVDDKADI-------ATADGIEQGYVICPSDQRFRLLYTFL- 412
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ D ++H + + V ++ +HG Q++R+ F F
Sbjct: 413 ------KKNLKRKLMVFFSSCDSVEFHLQFFNYV---SLPVLGIHGRQKQAKRSRTFFEF 463
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+L+CTDVAARGLD+P VDWI+QY AP +Y+HRVGRTAR G +G +LLFL+
Sbjct: 464 CNAEQGILLCTDVAARGLDIPEVDWIIQYDAPDDPKEYIHRVGRTARGAGRKGRALLFLL 523
Query: 766 PSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
P+EV+ ++ L ++ + E + KD + N+ Q +
Sbjct: 524 PTEVEFLKYLMENKVPLNEYEFPKDKIANV------------------------QSKYYQ 559
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI 884
+ + A G+ S+V YA++S L+ +FN ++ L A+SF LR+AP+V I
Sbjct: 560 IMEKSYFFRKLAISGFRSYVHAYAAHS--LKAVFNVNELDLNAVAQSFGLREAPNVQLKI 617
Query: 885 GKPKNKEELKNKKMAINKEKSFKQRGNFSK 914
K K A + ++ NF +
Sbjct: 618 ASSKKLTRNAPPKTAAQRRAKMYKKKNFKR 647
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
T +T +Q +I +L G D+L ++TGSGKTLA+ IP +++L+++ K + K+G
Sbjct: 190 FGFTHMTEIQYKTIPFLLTGRDLLGAAKTGSGKTLAFLIPAVERLRQL--KFTPKNGTGC 247
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA Q + L + GG K+E R+ G++ILV TPGRLL
Sbjct: 248 IILTPTRELAQQIYGVLISLLEHHHQ-THGISIGGSDKKAEARRLGNGVNILVCTPGRLL 306
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T KF +++ L++DEADRIL G+E + + ++ +++ Q++L SAT T
Sbjct: 307 DHLQNT-NFKFDRLQMLIIDEADRILQIGFEDTMRAIVRLIPQKR---QTVLFSATQT 360
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 189 TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGM 248
KF +++ L++DEADRIL G+E + + ++ +++ Q+VL SAT T V+ LA +
Sbjct: 313 NFKFDRLQMLIIDEADRILQIGFEDTMRAIVRLIPQKR---QTVLFSATQTRKVEDLARI 369
Query: 249 TLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 307
+L+ P+ I D DI D ++Q +++ P R L +F+ ++
Sbjct: 370 SLRGEPLYIGVDDKADI-------ATADGIEQGYVICPSDQRFRLLYTFL-------KKN 415
Query: 308 EESKMLVFMATQDMADYHTELLS 330
+ K++VF ++ D ++H + +
Sbjct: 416 LKRKLMVFFSSCDSVEFHLQFFN 438
>gi|281182661|ref|NP_001162381.1| ATP-dependent RNA helicase DDX18 [Papio anubis]
gi|162415904|gb|ABX89268.1| DEAD box polypeptide 18 (predicted) [Papio anubis]
Length = 670
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q S++P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q S++P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 197 MGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|342873274|gb|EGU75480.1| hypothetical protein FOXB_13992 [Fusarium oxysporum Fo5176]
Length = 587
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 295/551 (53%), Gaps = 56/551 (10%)
Query: 366 QNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQP 425
++N D+P+ L PV+ A S+ E MK +NE M T++T +Q+ I P
Sbjct: 91 EDNTDLPDGGKLTLPPVAGA--ESQSFAELNLSEKTMKA-INE-MKFTKMTEIQRRGIPP 146
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G +++ PTRELALQ +
Sbjct: 147 SLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGVIVVSPTRELALQIFGV 204
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T + F ++
Sbjct: 205 ARELMAHHSQTY-GIVIGGANRRAEADKLAKGVNLLIATPGRLLDHLQNTPFV-FKNLKS 262
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQI 604
LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T V+ LA ++L+ P+ I
Sbjct: 263 LVIDEADRILEIGFEDEMRQIIKILPKE--DRQTMLFSATQTTKVEDLARISLRPGPLYI 320
Query: 605 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
+ D ++T + L +Q +++ + R L SF+ + + K++VF
Sbjct: 321 NV-DEEKQYSTVEGL------EQGYVICDAEKRFNLLFSFL-------KRNLKKKIIVFF 366
Query: 665 ATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
++ YH ELL+ + +I LHG Q +RT F F + K G LICTDVAARGL
Sbjct: 367 SSCACVKYHAELLNYI---DIPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 423
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIE 783
D+P VDWIVQ+ P DY+HRVGRTAR + +G SLL L P+EV + L+ R+ +
Sbjct: 424 DIPSVDWIVQFDPPDDPRDYIHRVGRTARGSNTKGRSLLILQPNEVGFLSHLKAARVPV- 482
Query: 784 EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSW 843
+E D ++ + +Q E + L+ SA GY S+
Sbjct: 483 ---------------VEYDFPKIIN---------IQSQLEKLISSNYYLNKSAKDGYRSY 518
Query: 844 VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKE 903
+ YAS+S LR +F+ ++ L AKSF P V +G +K++ + A +
Sbjct: 519 LHAYASHS--LRSVFDINKLDLAKVAKSFGFTVPPRVDITLGASMSKDKKHQGRRAYGSQ 576
Query: 904 KSFKQRGNFSK 914
Q F++
Sbjct: 577 PRQGQGNKFTR 587
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G
Sbjct: 131 MKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGV 188
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 189 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEADKLAKGVNLLIATPGRLL 247
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 248 DHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKILPKE--DRQTMLFSATQTTK 304
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E ++S VE L+QGY
Sbjct: 305 VEDLARISLRPGPLYINVDEEKQYSTVEG---------LEQGY 338
>gi|380011151|ref|XP_003689675.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like [Apis
florea]
Length = 607
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 276/511 (54%), Gaps = 52/511 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 126 MGFTNMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIELIYKL--KFMPRNGTGC 183
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + L GG ++E ++ KGI+I+VATPGRLL
Sbjct: 184 IIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLSKGINIVVATPGRLL 242
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 243 DHLQNTPDFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKR---QTMLFSATQTKK 299
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L+ P+ + D + + L+Q ++ P + R + L +F+
Sbjct: 300 TEMLMTLALKKEPVYVGVDDDKEKATV-------EGLEQGYVACPSEKRFLLLFTFL--- 349
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 350 ----KKNRKKKIMVFFSSCMSVKYHHELLNYI---DLPVLSIHGKQKQTKRTTTFFQFCN 402
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 403 ASSGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 462
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E +++AD +Q+ E V
Sbjct: 463 ELGFLRYLKQAKVPVNEFDF--------------SWNKIAD---------IQLQLEKLVS 499
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + ++VR Y S+ L+ IFN + + L AKSF P+V +G
Sbjct: 500 KNYFLNMSAKEAFKAYVRAYDSHH--LKQIFNIETLDLAKVAKSFGFVVPPAVDLKVGVN 557
Query: 888 KNKEELKNKKMAINKEKSFKQRGNFSKKQML 918
KN K+++ FK N + ++ L
Sbjct: 558 KNSRP--RKRLSEGGYGYFKNTNNSNSEKQL 586
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 143/248 (57%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 126 MGFTNMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIELIYKL--KFMPRNGTGC 183
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + L GG ++E ++ KGI+I+VATPGRLL
Sbjct: 184 IIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLSKGINIVVATPGRLL 242
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 243 DHLQNTPDFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKR---QTMLFSATQTKK 299
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
T T LK V V D+ ++ L+QGY E+ LKK + +
Sbjct: 300 TEML-MTLALKKEPVYVGVDDDKEKATVEGLEQGYVACPSEKRFLLLFTFLKKNRKKKIM 358
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 359 VFFSSCMS 366
>gi|221132610|ref|XP_002156165.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Hydra
magnipapillata]
Length = 620
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 278/505 (55%), Gaps = 55/505 (10%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEG---MNITQVTTVQQLSIQPILDGGDVLVRSQ 437
P EA P+ +EF + + + +G M TQ+T +Q ++ P+L+G D+L ++
Sbjct: 119 PNQEASLPPS--KEFKSLEGLVCEKTLKGVFDMGFTQMTEIQYKTVMPLLNGRDLLGAAK 176
Query: 438 TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIV 497
TGSGKTLA+ IP I+ L ++ ++G A+II PTREL+LQT + L +
Sbjct: 177 TGSGKTLAFLIPTIELLYKLN--FMPRNGTGAIIISPTRELSLQTFGVLRDLLQHHQQTF 234
Query: 498 PSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQ 557
+ GG K E R+++G++ILVATPGRLLDH ++T F ++ L++DEADRIL+
Sbjct: 235 -GIVMGGANRKQEAERLQRGVNILVATPGRLLDHLQNTPGFVFKNLQCLIIDEADRILEI 293
Query: 558 GYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTT 616
G+E ++ + ++IL K++ Q++L SAT T V+ LA ++L+ P+ + D ++
Sbjct: 294 GFEEEMKQIIKILPKKR---QTLLFSATQTRKVEDLARVSLKKAPLYVGVDDDKEVSTV- 349
Query: 617 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 676
+ L+Q +IV P + R + L +F+ ++ + K++VF ++ +H+EL
Sbjct: 350 ------EGLEQGYIVVPSEKRFLLLFTFLK-------KNMKKKVMVFFSSCHSVKFHSEL 396
Query: 677 LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
L+ + +I +HG Q +RT F F + +SG+L+CTDVAARGLD+P VDWIVQY
Sbjct: 397 LNYI---DIPVMDIHGKQKQQKRTSTFFEFCTAESGILLCTDVAARGLDIPEVDWIVQYD 453
Query: 737 APSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
P +Y+HRVGRTAR G +LLFL+P E+ + L++ ++ + E
Sbjct: 454 PPDDPKEYIHRVGRTARGSQGRGHALLFLLPEELGFLRYLKHAKVPLNEY---------- 503
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
D S+ N+ Q E + + L+ SA GY S+++ YAS+ R
Sbjct: 504 ------DFSKAKISNI-------QSQLEKLISKNYFLNKSAKDGYRSYLQAYASHQH--R 548
Query: 856 HIFNFKQIHLGHFAKSFALRDAPSV 880
+IFN I L SF P+V
Sbjct: 549 NIFNVNTIDLQKVGLSFGFTVPPNV 573
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M TQ+T +Q ++ P+L+G D+L ++TGSGKTLA+ IP I+ L ++ ++G A
Sbjct: 149 MGFTQMTEIQYKTVMPLLNGRDLLGAAKTGSGKTLAFLIPTIELLYKLN--FMPRNGTGA 206
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+LQT + L + + GG K E R+++G++ILVATPGRLL
Sbjct: 207 IIISPTRELSLQTFGVLRDLLQHHQQTF-GIVMGGANRKQEAERLQRGVNILVATPGRLL 265
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ L++DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T
Sbjct: 266 DHLQNTPGFVFKNLQCLIIDEADRILEIGFEEEMKQIIKILPKKR---QTLLFSATQT 320
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 84/147 (57%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T F ++ L++DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T V+
Sbjct: 269 QNTPGFVFKNLQCLIIDEADRILEIGFEEEMKQIIKILPKKR---QTLLFSATQTRKVED 325
Query: 245 LAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L+ P+ + D ++ + L+Q +IV P + R + L +F+
Sbjct: 326 LARVSLKKAPLYVGVDDDKEVSTV-------EGLEQGYIVVPSEKRFLLLFTFLK----- 373
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ +H+ELL+
Sbjct: 374 --KNMKKKVMVFFSSCHSVKFHSELLN 398
>gi|62630202|gb|AAX88947.1| unknown [Homo sapiens]
Length = 546
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 73 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 130
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 131 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 187
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 188 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 244
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 245 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 296
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 297 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 347
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 348 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 407
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 408 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 444
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 445 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 497
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 73 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 130
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 131 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 187
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 188 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 244
>gi|149238155|ref|XP_001524954.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032522|sp|A5E2Z9.1|HAS1_LODEL RecName: Full=ATP-dependent RNA helicase HAS1
gi|146451551|gb|EDK45807.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 559
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 293/533 (54%), Gaps = 59/533 (11%)
Query: 377 RRLKPVSEALFAPTSYEEF--PGI-HPFMKKNLNE-------GMNITQVTTVQQLSIQPI 426
+RL+ +++ + TS E PG+ + F K + +E M ++T VQ +I P+
Sbjct: 68 KRLQELTKPKVSNTSEAEADEPGVNYSFEKADFSEPTMKAIKEMGFQKMTKVQAKTIPPL 127
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTLA+ +P ++ L + KI ++G +II PTRELALQ +
Sbjct: 128 LAGRDVLGAAKTGSGKTLAFLLPAVELLYSL--KIKPRNGTAVIIITPTRELALQIFGVA 185
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + + GG + E ++ KG+++LVATPGRLLDH K+T+ F ++ L
Sbjct: 186 RQLMEYHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQGFVFLNLKAL 244
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 245 VIDEADRILEIGFEEEMKQIIKILPNE--DRQTMLFSATQTTKVEDLARISLRPGPLYIN 302
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D+ D L+Q ++V R + L SF+ +N+ + K++VF++
Sbjct: 303 VVPEKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL---KRNI----KKKIIVFLS 348
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + +++ELL+ + ++ LHG Q +RT F F + K G+L+CTDVAARGLD
Sbjct: 349 SCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLD 405
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PSE+ + L+ + + E
Sbjct: 406 IPAVDWIIQFDPPDDPRDYIHRVGRTARGTDGKGKSLMFLTPSELGFLRYLKAANVPLNE 465
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
E +++A NV++ T L + +LH SA GY +++
Sbjct: 466 --------------YEFPANKIA--NVQSQLTKL-------IKTNYLLHQSAKDGYRAYL 502
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
+ Y+S+S L+ ++ ++ L KSF P V IG E K+KK
Sbjct: 503 QAYSSHS--LKTVYQIDKLDLVKVGKSFGFDVPPKVNITIGASGKSIEKKHKK 553
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ +I P+L G DVL ++TGSGKTLA+ +P ++ L + KI ++G
Sbjct: 111 MGFQKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAVELLYSL--KIKPRNGTAV 168
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG + E ++ KG+++LVATPGRLL
Sbjct: 169 IIITPTRELALQIFGVARQLMEYHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLL 227
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 228 DHLKNTQGFVFLNLKALVIDEADRILEIGFEEEMKQIIKILPNE--DRQTMLFSATQT 283
>gi|165934071|gb|ABY74563.1| DEAD box polypeptide 18 (predicted) [Callithrix jacchus]
Length = 623
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 150 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 207
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 208 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 264
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 265 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 321
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 322 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 373
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 374 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 424
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 425 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 484
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 485 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 521
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 522 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 574
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 150 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 207
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 208 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 264
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 265 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 321
>gi|357620542|gb|EHJ72693.1| hypothetical protein KGM_04294 [Danaus plexippus]
Length = 618
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 268/473 (56%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP I + ++ K ++G
Sbjct: 144 MGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLAFLIPAIDLIYKL--KFKPRNGTGV 201
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL++QT + +L K + + GG +E ++ KGI+ILVATPGRLL
Sbjct: 202 IILSPTRELSMQTFGVLMELMK-YHHHTYGLVMGGANRSTEAQKLSKGINILVATPGRLL 260
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 261 DHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIRLLPKRR---QTMLFSATQTKK 317
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + +++ P+ + D H ++ DSL+Q +IV P + R++ L +F+
Sbjct: 318 TESLTALAVKHEPVYVGVDD----HREQATV---DSLEQGYIVCPSEKRMMVLFTFL--- 367
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF++T YH EL + + ++ +HG Q++RT F F +
Sbjct: 368 ----KKNRKKKVMVFLSTCMSVKYHHELFNYI---DLPVMSIHGKQQQAKRTTTFFQFCN 420
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR +G G +LLFL P
Sbjct: 421 AESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPE 480
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++AD +Q+ E +
Sbjct: 481 ELGFLRYLKQSKVTLNEF--------------EFSWNKVAD---------IQLQLEKLIS 517
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ SA + + S++R Y S+ L+ IF+ I L +KSF P+V
Sbjct: 518 RNYFLNQSAKEAFKSYLRAYDSHH--LKTIFDIDTIDLAKVSKSFGFTVPPAV 568
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 144/253 (56%), Gaps = 26/253 (10%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP I + ++ K ++G
Sbjct: 144 MGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLAFLIPAIDLIYKL--KFKPRNGTGV 201
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL++QT + +L K + + GG +E ++ KGI+ILVATPGRLL
Sbjct: 202 IILSPTRELSMQTFGVLMELMK-YHHHTYGLVMGGANRSTEAQKLSKGINILVATPGRLL 260
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 261 DHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIRLLPKRR---QTMLFSATQT-- 315
Query: 181 TCWCKHTETLKFSKVEHL-----VLDEADRI----LDQGY-----ERDIAEFLEILKKQK 226
K TE+L V+H V D ++ L+QGY E+ + LKK +
Sbjct: 316 ----KKTESLTALAVKHEPVYVGVDDHREQATVDSLEQGYIVCPSEKRMMVLFTFLKKNR 371
Query: 227 PQFQSVLLSATLT 239
+ V LS ++
Sbjct: 372 KKKVMVFLSTCMS 384
>gi|401626153|gb|EJS44112.1| has1p [Saccharomyces arboricola H-6]
Length = 505
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/480 (35%), Positives = 270/480 (56%), Gaps = 49/480 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M + +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 58 EKMGFSTMTSVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGT 115
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGR
Sbjct: 116 GIIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGR 174
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 175 LLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 232
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 233 TKVEDLARISLRPGPLFINVVPETD--NST-----ADGLEQGYVVCDSDDRFLLLFSFL- 284
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 285 ------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 335
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL
Sbjct: 336 CNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 395
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E E +++A+ +Q E
Sbjct: 396 PNELGFLRYLKASKVPLNE--------------YEFPTNKIAN---------VQSQLEKL 432
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ LH +A GY S+++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 433 IKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 490
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 163/330 (49%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 60 MGFSTMTSVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGI 117
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 118 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLL 176
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 177 DHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT-- 232
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 233 ------------TKVEDLA-----RI------------------------------SLRP 245
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 246 G-----------PLFINVVPETD--NST-----ADGLEQGYVVCDSDDRFLLLFSFL--- 284
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 285 ----KRNQKKKIIVFLSSCNSVKYYAELLN 310
>gi|55741498|ref|NP_001006997.1| ATP-dependent RNA helicase DDX18 [Rattus norvegicus]
gi|54035578|gb|AAH83919.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Rattus norvegicus]
Length = 674
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 263/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 199 EEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGT 256
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGR
Sbjct: 257 GVLILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIVVATPGR 315
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 316 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 372
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D ++ D L+Q ++V P + R + L +F+
Sbjct: 373 RKVEDLARISLKKEPLYVGVDDDKEVATV-------DGLEQGYVVCPSEKRFLLLFTFL- 424
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 425 ------KKNRKKKVMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 475
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 476 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 535
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + + S+++D +Q E
Sbjct: 536 PEELGFLRYLKQSKVPLNQFDF--------------SWSKVSD---------IQSQLEKL 572
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 573 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 625
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 201 MGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGV 258
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 259 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIVVATPGRLL 317
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 318 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 372
>gi|410897405|ref|XP_003962189.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Takifugu
rubripes]
Length = 649
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 267/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ Q+T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 175 LGFEQMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYKL--KFMPRNGTGV 232
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
VI+ PTRELA+QT + +L T V ++ + GG +E R+ G++ILVATPGR
Sbjct: 233 VILSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQRLANGVNILVATPGR 289
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T F ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 290 LLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTLLFSATQT 346
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D + D L+Q ++V P + R + L +F+
Sbjct: 347 RRVEDLARISLKKEPLYVGVDDDKEKATV-------DGLEQGYVVCPSEKRFLLLFTFL- 398
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 399 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQF 449
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR + G +LL L
Sbjct: 450 CNADSGILLCTDVAARGLDIPEVDWIIQYDPPDDPKEYIHRVGRTARGIEGRGHALLILR 509
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 510 PEELGFLRYLKQAKVPLSEF--------------EFSWSKISD---------IQSQLEKL 546
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S+VR Y S+S L+ I+N ++L A SF + P V
Sbjct: 547 IEKNYYLHKSAQEAYKSYVRAYDSHS--LKQIYNVNTLNLLMVALSFGFKVPPYV 599
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 118/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ Q+T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 175 LGFEQMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYKL--KFMPRNGTGV 232
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
VI+ PTRELA+QT + +L T V ++ + GG +E R+ G++ILVATPGR
Sbjct: 233 VILSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQRLANGVNILVATPGR 289
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T F ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 290 LLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTLLFSATQT 346
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T F ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T V+
Sbjct: 295 QNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTLLFSATQTRRVED 351
Query: 245 LAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L + P+ + D + D L+Q ++V P + R + L +F+
Sbjct: 352 LARISLKKEPLYVGVDDDKEKATV-------DGLEQGYVVCPSEKRFLLLFTFL------ 398
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 399 -KKNRKKKLMVFFSSCMSVKYHYELLN 424
>gi|242022035|ref|XP_002431447.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212516735|gb|EEB18709.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 636
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 272/482 (56%), Gaps = 50/482 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP+++ + ++ K ++G+ A
Sbjct: 161 MGFTTMTEIQAKSIPPLLEGRDLVGSAKTGSGKTLAFLIPVVELIYKL--KFLPRNGVGA 218
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + + + GG K+E ++ KGI+ILVATPGRLL
Sbjct: 219 IIISPTRELSMQTFGVLKELMK-YHYHTYGLVIGGANRKAEAEKLSKGINILVATPGRLL 277
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 278 DHLQNTPGFLFKNLQCLVIDEADRILDIGFEEELKQIINLLPKRR---QTMLFSATTTAK 334
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L+ P+ + D + + L+Q ++V P + R + L +F+
Sbjct: 335 TENLTKLALKKEPVYVGIDDRKEKATV-------EGLEQGYVVCPSEKRFLLLFTFL--- 384
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++++ K++VF ++ +H ELL+ + ++ +HG Q++RT VF F +
Sbjct: 385 ----KKNKKKKVMVFFSSCLSVKFHHELLNYI---DLPVMCIHGKQKQAKRTTVFFQFCN 437
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 438 AESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 497
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ R+ + E E S++AD +Q+ E +
Sbjct: 498 ELGFLRYLKQARVPLNE--------------FEFSWSKIAD---------IQVQLEKLIG 534
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L++IF+ + L A SF P V +G
Sbjct: 535 KNYFLNLSAKEAFKSYVRAYDSHH--LKNIFDVNTLDLEKVATSFGFTVPPRVDLQVGGV 592
Query: 888 KN 889
K+
Sbjct: 593 KS 594
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 121/181 (66%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP+++ + ++ K ++G+ A
Sbjct: 161 MGFTTMTEIQAKSIPPLLEGRDLVGSAKTGSGKTLAFLIPVVELIYKL--KFLPRNGVGA 218
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + + + GG K+E ++ KGI+ILVATPGRLL
Sbjct: 219 IIISPTRELSMQTFGVLKELMK-YHYHTYGLVIGGANRKAEAEKLSKGINILVATPGRLL 277
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T F ++ LV+DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 278 DHLQNTPGFLFKNLQCLVIDEADRILDIGFEEELKQIINLLPKRR---QTMLFSATTTAK 334
Query: 181 T 181
T
Sbjct: 335 T 335
>gi|308080082|ref|NP_001183327.1| uncharacterized protein LOC100501728 [Zea mays]
gi|238010798|gb|ACR36434.1| unknown [Zea mays]
Length = 649
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 263/479 (54%), Gaps = 56/479 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L S ++G A
Sbjct: 170 MNYTHLTQIQARSIPHLLEGNDVMGAAKTGSGKTLAFLIPAIEMLYHTH--FSPRNGTGA 227
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L K + + ++ GG +SE ++ KGI++LVATPGRLL
Sbjct: 228 IVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGNNRRSEADQLAKGINLLVATPGRLL 286
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T++ + +++ LV+DEADRIL+Q +E D+ + + L + + Q++L SAT TP
Sbjct: 287 DHLQNTKSFIYRRLKCLVIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQTPE 343
Query: 590 VQRLAGMTLQN-------PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
V++ A ++ + P+ + D S + L+Q + V R + L
Sbjct: 344 VEKFAKLSFEKNEESKKKPVYVGVDDDK-------SKATVEGLQQGYCVISSDKRFLVLY 396
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ K K++VF ++ + +H ELL+ LG I +HG Q +RT
Sbjct: 397 AFLRKK-------RNKKIMVFFSSCNSVKFHAELLN-FLG--IECSDIHGKQKQQKRTTT 446
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
F +F + G+L+CT+VAARGLD+P VD+I+QY P DY+HRVGRTAR +GS+L
Sbjct: 447 FFSFCKAEKGILLCTNVAARGLDIPDVDYILQYDPPDEPKDYIHRVGRTARGEKGKGSAL 506
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL+P E+K + L+ ++ + E + + LQ
Sbjct: 507 LFLLPEELKFLIYLKAAKVTLTEYEFN-----------------------QKNVPNLQSQ 543
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E+ V + L+ SA + Y S+V Y S+S ++ IFN Q+ L A SF ++ P V
Sbjct: 544 LENIVGENYFLNQSAKEAYRSYVLAYDSHS--MKDIFNVHQLDLQKVAASFGFKNPPKV 600
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L S ++G A
Sbjct: 170 MNYTHLTQIQARSIPHLLEGNDVMGAAKTGSGKTLAFLIPAIEMLYHTH--FSPRNGTGA 227
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L K + + ++ GG +SE ++ KGI++LVATPGRLL
Sbjct: 228 IVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGNNRRSEADQLAKGINLLVATPGRLL 286
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T++ + +++ LV+DEADRIL+Q +E D+ + + L + + Q++L SAT TP
Sbjct: 287 DHLQNTKSFIYRRLKCLVIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQTP- 342
Query: 181 TCWCKHTETLKFSKV 195
E KF+K+
Sbjct: 343 -------EVEKFAKL 350
>gi|225682474|gb|EEH20758.1| ATP-dependent RNA helicase has1 [Paracoccidioides brasiliensis
Pb03]
Length = 607
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 263/475 (55%), Gaps = 49/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 144 EDMKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGT 201
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGR
Sbjct: 202 GVIVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGR 260
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 261 LLDHLQNTQGFIFRNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 318
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ H S V + L+Q +++ R + L SF+
Sbjct: 319 TKVEDLARISLRPGPLYINVD-----HRKEYSTV--EGLEQGYVICDSDKRFLLLFSFL- 370
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F
Sbjct: 371 ------KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEF 421
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLI 765
+ K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL
Sbjct: 422 CNAKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQ 481
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV ++ L+ R+ + E + +++V Q E
Sbjct: 482 PSEVGFLKHLKEARVPVVEFDFP--AKKIVNV---------------------QSQLEKL 518
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ Q L+ SA GY S+++ YAS+S LR +FN ++ L AKSF P V
Sbjct: 519 IGQNYYLNKSAKDGYRSYLQAYASHS--LRSVFNVHKLDLVKVAKSFGFPTPPRV 571
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 146 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 203
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 204 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 262
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 263 DHLQNTQGFIFRNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 318
>gi|401839179|gb|EJT42502.1| HAS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 505
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 277/496 (55%), Gaps = 54/496 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 58 EKLGFTTMTSVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGT 115
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGR
Sbjct: 116 GIIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGR 174
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 175 LLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 232
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 233 TKVEDLARISLRPGPLFINVVPETD--NST-----ADGLEQGYVVCDSDDRFLLLFSFL- 284
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 285 ------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 335
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLLFL 764
+ + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G E G SL+FL
Sbjct: 336 CNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-GTEGKGKSLMFL 394
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
P+E+ + L+ ++ + E E +++A+ +Q E
Sbjct: 395 TPNELGFLRYLKASKVPLNE--------------YEFPTNKIAN---------VQSQLEK 431
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---I 881
+ LH +A GY S+++ YAS+S L+ ++ ++ L AKS+ P V I
Sbjct: 432 LIKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITI 489
Query: 882 SGIGKPKNKEELKNKK 897
GK N + K+ K
Sbjct: 490 GVSGKTPNTKRRKSHK 505
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 163/330 (49%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 60 LGFTTMTSVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGI 117
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 118 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLL 176
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 177 DHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT-- 232
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 233 ------------TKVEDLA-----RI------------------------------SLRP 245
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 246 G-----------PLFINVVPETD--NST-----ADGLEQGYVVCDSDDRFLLLFSFL--- 284
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 285 ----KRNQKKKIIVFLSSCNSVKYYAELLN 310
>gi|327260241|ref|XP_003214943.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Anolis
carolinensis]
Length = 666
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 267/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 192 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAIELIYKL--KFMPRNGTGV 249
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E R+ GI+I+VATPGR
Sbjct: 250 LILSPTRELAMQTYGVLKEL---MTHHVHTYGLVMGGSNRSAEAQRLGNGINIIVATPGR 306
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 307 LLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 363
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D+ + + L+Q ++V P + R + L +F+
Sbjct: 364 RKVEDLAKISLKKEPLYVGVDDNKETATV-------EGLEQGYVVCPSEKRFLLLFTFL- 415
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 416 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQTKRTTTFFQF 466
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 467 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILR 526
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ R+ + E E S+++D +Q E
Sbjct: 527 PEELGFLRYLKQARVPLNEF--------------EFSWSKISD---------IQSQLEKL 563
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y +++R Y S+S L+ I+N + L A SF + P V
Sbjct: 564 IEKNYFLHKSAQEAYKAYIRAYDSHS--LKEIYNVNNLDLLKVALSFGFKVPPFV 616
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 118/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 192 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAIELIYKL--KFMPRNGTGV 249
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E R+ GI+I+VATPGR
Sbjct: 250 LILSPTRELAMQTYGVLKEL---MTHHVHTYGLVMGGSNRSAEAQRLGNGINIIVATPGR 306
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 307 LLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 363
>gi|149033136|gb|EDL87954.1| rCG37594 [Rattus norvegicus]
Length = 623
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 263/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 148 EEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGT 205
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGR
Sbjct: 206 GVLILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIVVATPGR 264
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 265 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 321
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D ++ D L+Q ++V P + R + L +F+
Sbjct: 322 RKVEDLARISLKKEPLYVGVDDDKEVATV-------DGLEQGYVVCPSEKRFLLLFTFL- 373
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 374 ------KKNRKKKVMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 424
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 425 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 484
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + + S+++D +Q E
Sbjct: 485 PEELGFLRYLKQSKVPLNQFDF--------------SWSKVSD---------IQSQLEKL 521
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 522 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 574
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 150 MGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGV 207
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 208 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIVVATPGRLL 266
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 267 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 321
>gi|291237232|ref|XP_002738539.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18-like
[Saccoglossus kowalevskii]
Length = 634
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 265/473 (56%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI +L+G D+L +QTGSGKTLA+ IP I+ L ++ K ++G
Sbjct: 159 MGFTHMTEIQSKSIPHLLEGRDLLAAAQTGSGKTLAFLIPCIELLHKL--KFMPRNGTGV 216
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + ++ K + + + GG E ++ KG++I+VATPGRLL
Sbjct: 217 IIISPTRELSMQTYGVLREVLK-YHYHTFGLIMGGANRAEESKKLGKGVNIVVATPGRLL 275
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 276 DHLQNSPQFMYKNLQCLVIDEADRILEVGFEEEMKQIMKLLPKRR---QTMLFSATQTKK 332
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ LA ++L+ P+ + D T + L+Q ++V + R + L +F+
Sbjct: 333 IENLARLSLKTQPVYVGVDD-------TKEKATVEGLEQGYVVCTSEKRFLLLFTFL--- 382
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ K++VF ++ YH ELL+ + ++ +HG Q++RT+ F F +
Sbjct: 383 ----KKNRRKKVMVFFSSCMSVKYHCELLNYI---DLPVMSIHGRQKQTKRTQTFFQFCN 435
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 436 ASEGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGIDGRGHALLILRPE 495
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+N ++ + E E +++A+ +Q E +
Sbjct: 496 ELGFLRYLKNAKVPLSE--------------FEFSWNKIAN---------IQSQLERLIE 532
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH S+ + Y S+VR Y S+S L+HIF+ + L A+SF + PSV
Sbjct: 533 KNYFLHKSSQEAYKSYVRAYDSHS--LKHIFDVNTLDLQKAAQSFGFKVPPSV 583
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 115/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI +L+G D+L +QTGSGKTLA+ IP I+ L ++ K ++G
Sbjct: 159 MGFTHMTEIQSKSIPHLLEGRDLLAAAQTGSGKTLAFLIPCIELLHKL--KFMPRNGTGV 216
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + ++ K + + + GG E ++ KG++I+VATPGRLL
Sbjct: 217 IIISPTRELSMQTYGVLREVLK-YHYHTFGLIMGGANRAEESKKLGKGVNIVVATPGRLL 275
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +++ + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 276 DHLQNSPQFMYKNLQCLVIDEADRILEVGFEEEMKQIMKLLPKRR---QTMLFSATQT 330
>gi|118572555|sp|Q0UR48.1|HAS1_PHANO RecName: Full=ATP-dependent RNA helicase HAS1
Length = 610
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 272/483 (56%), Gaps = 60/483 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L MR K ++G
Sbjct: 149 MGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRFK--PRNGTGV 206
Query: 470 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+++ PTRELALQ E+ K ++F ++ GG ++E ++ KG+++L+ATP
Sbjct: 207 IVVSPTRELALQIFGVARELMEKHSQTFGIVI-----GGANRRAEAEKLAKGVNLLIATP 261
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH +T+ F ++ L++DEADRIL+ G+E ++ ++IL + Q++L SAT
Sbjct: 262 GRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSIIKILPTDR---QTMLFSAT 318
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V+ LA ++L+ P+ I+ D H+T + L +Q +++ R L SF
Sbjct: 319 QTTKVEDLARISLKAGPLYINV-DYRKEHSTVEGL------EQGYVICDSDTRFRLLFSF 371
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ + ++ K++VF ++ + ++ ELL+ + ++ +LHG + Q RT F
Sbjct: 372 L-------KKHQKKKVIVFFSSCNSVKFYAELLNYI---DLPVLELHGKLKQQARTNRFF 421
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLL 762
F + +SG LICTDVAARGLD+P VDW++Q+ P DY+HRVGRTAR G EG SL+
Sbjct: 422 EFCNAQSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTAR-GSEGKGRSLM 480
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL+PSE+ ++ L+ R+ + E +L +L++ Q
Sbjct: 481 FLLPSEIGFLKLLKEARVPLVEFELP--ANKILNI---------------------QSQL 517
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E+ + + L+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P +
Sbjct: 518 EALITKNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVHKLDLVKVAKSFGFSTPPRIDI 575
Query: 883 GIG 885
+G
Sbjct: 576 SLG 578
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L MR K ++G
Sbjct: 149 MGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRFK--PRNGTGV 206
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+++ PTRELALQ E+ K ++F ++ GG ++E ++ KG+++L+ATP
Sbjct: 207 IVVSPTRELALQIFGVARELMEKHSQTFGIVI-----GGANRRAEAEKLAKGVNLLIATP 261
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH +T+ F ++ L++DEADRIL+ G+E ++ ++IL + Q++L SAT
Sbjct: 262 GRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSIIKILPTDR---QTMLFSAT 318
Query: 177 LT 178
T
Sbjct: 319 QT 320
>gi|325088110|gb|EGC41420.1| ATP-dependent RNA helicase HAS1 [Ajellomyces capsulatus H88]
Length = 635
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/588 (33%), Positives = 307/588 (52%), Gaps = 67/588 (11%)
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELLST---KKKIKKLKEYNIDPDNYEIPKKT 354
LGK NE+E L T D A+ EL + +K KE +D D K T
Sbjct: 74 LGKIAKANEEEPDPEL---ETTDEAE-QVELPQSSAGEKDGDTDKEQEVDSDEEGEEKPT 129
Query: 355 EVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQ 414
KS ++ ++P+V L P +EA P + E MK + M
Sbjct: 130 NGKSN------EDQLELPSVNAVSL-PQTEA--EPQKFSELNLSDKTMKAIAD--MKFET 178
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G +++ P
Sbjct: 179 MTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGVIVVSP 236
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLLDH ++
Sbjct: 237 TRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAGKLTKGVNLLIATPGRLLDHLQN 295
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T V+ LA
Sbjct: 296 TQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE--DRQTMLFSATQTTKVEDLA 353
Query: 595 GMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
++L Q P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 354 RISLRQGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL-------K 399
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
+ + K++VF ++ + YH ELL+ + ++ L+G Q +RT F F + G
Sbjct: 400 RNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLYGKQKQQKRTNTFFEFCNATQGT 456
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLV 772
LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL PSEV +
Sbjct: 457 LICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPSEVGFL 516
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
+ L+ R+ + V+ + R+ + +Q E + Q L
Sbjct: 517 KHLKEARVPV--------------VEFDFPAKRIVN---------VQSQLEKLIGQNYYL 553
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 554 NKSAKDGYRSYLQAYASHS--LRSVFDVHKLDLVKVAKSFGFPTPPRV 599
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 174 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 231
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 232 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAGKLTKGVNLLIATPGRLL 290
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 291 DHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE--DRQTMLFSATQT 346
>gi|19115400|ref|NP_594488.1| ATP-dependent RNA helicase Has1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1351666|sp|Q09916.1|HAS1_SCHPO RecName: Full=ATP-dependent RNA helicase has1
gi|1067204|emb|CAA91949.1| ATP-dependent RNA helicase Has1 (predicted) [Schizosaccharomyces
pombe]
Length = 578
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 271/496 (54%), Gaps = 50/496 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 107 MGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYAL--KFKPRNGTGV 164
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L K + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 165 IIISPTRELALQIFGVAKELLK-YHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLL 223
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F + LV+DEADRIL+ G+E ++ + ++IL + Q ++L SAT T
Sbjct: 224 DHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQ--TLLFSATQTTK 281
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ DS +T + L +Q ++V R + L SF+
Sbjct: 282 VEDLARISLKPGPLYVNV-DSGKPTSTVEGL------EQGYVVVDSDKRFLLLFSFL--- 331
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VFM++ Y ELL+ + ++ LHG Q RT F F +
Sbjct: 332 ----KRNLKKKVIVFMSSCASVKYMAELLNYI---DLPVLDLHGKQKQQRRTNTFFEFCN 384
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CT+VAARGLD+P VDWIVQY P DY+HRVGRTAR G SL+FL PS
Sbjct: 385 AEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGTKGTGKSLMFLAPS 444
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A+ +Q E V
Sbjct: 445 ELGFLRYLKTAKVSLNE--------------FEFPANKVAN---------VQSQLEKLVS 481
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L SA GY S+++ YASYS L+ IF+ ++ L AKSF P+V IG
Sbjct: 482 KNYYLQQSAKDGYRSYLQAYASYS--LKSIFDINKLDLAKVAKSFGFAHPPNVNITIG-A 538
Query: 888 KNKEELKNKKMAINKE 903
+ + K ++ NK+
Sbjct: 539 SGRTDKKERRAGYNKK 554
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 107 MGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYAL--KFKPRNGTGV 164
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L K + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 165 IIISPTRELALQIFGVAKELLK-YHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLL 223
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F + LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 224 DHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENR--QTLLFSATQT 279
>gi|354474537|ref|XP_003499487.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Cricetulus griseus]
Length = 656
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 264/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 181 EEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGT 238
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGR
Sbjct: 239 GVLILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLINGINIIVATPGR 297
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 298 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPVRR---QTMLFSATQT 354
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D ++ D L+Q ++V P + R + L +F+
Sbjct: 355 RKVEDLARISLKKEPLYVGVDDDKEVATV-------DGLEQGYVVCPSEKRFLLLFTFL- 406
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 407 ------KKNRKKKVMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 457
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 458 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 517
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + + S+++D +Q E
Sbjct: 518 PEELGFLRYLKQSKVPLNQFDF--------------SWSKVSD---------IQSQLEKL 554
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 555 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 607
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 183 MGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGV 240
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 241 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEAQKLINGINIIVATPGRLL 299
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 300 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPVRR---QTMLFSATQT 354
>gi|170582010|ref|XP_001895938.1| ATP-dependent RNA helicase DDX18 [Brugia malayi]
gi|158596969|gb|EDP35219.1| ATP-dependent RNA helicase DDX18, putative [Brugia malayi]
Length = 547
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 266/473 (56%), Gaps = 44/473 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q I+P+L G DV+ ++TGSGKTLA+ IP ++ L ++ K ++G
Sbjct: 83 MGFTKMTEIQAKCIEPLLQGRDVIASAKTGSGKTLAFLIPAVELLIKLEWKA--RNGTGV 140
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTREL++QT + +++ + + GG ++E ++ +G+S LVATPGRLL
Sbjct: 141 IVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAEAQKLARGVSFLVATPGRLL 200
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ ++ L++DEADRILD G+E ++ + L +L K++ Q++ SAT TP
Sbjct: 201 DHLQNTDGFMVKNLKCLIIDEADRILDIGFEIEMQQILRVLPKKR---QTMFFSATQTPK 257
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V L L +P+++ + + N ++ L L+Q ++V P + R + L +F+
Sbjct: 258 VDELVKAALHTDPVKV-GINKINPKNGSE-LATVSGLQQGYVVCPSEKRFLLLFTFL--- 312
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ + YH ELL+ + +I+ +HG Q +RT F +F
Sbjct: 313 ----KKNRDKKVMVFFSSCNSVKYHHELLNYI---DISVQCIHGKQKQQKRTCTFFSFCQ 365
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
KSG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR V G +LL L P
Sbjct: 366 AKSGILLCTDVAARGLDIPQVDWIVQYDPPDEPREYIHRVGRTARGVTGTGHALLILRPE 425
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L++ ++ + E E S++A+ +QM E +
Sbjct: 426 ELGFLRYLKHAKVLLNE--------------YEFSWSKIAN---------IQMQLEKLIE 462
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+ SA + Y ++R Y S+S L++IF+ + L +KSF P V
Sbjct: 463 HNYYLNKSAKEAYKCYIRAYDSHS--LKNIFDVNTLDLIAVSKSFGFSTPPFV 513
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q I+P+L G DV+ ++TGSGKTLA+ IP ++ L ++ K ++G
Sbjct: 83 MGFTKMTEIQAKCIEPLLQGRDVIASAKTGSGKTLAFLIPAVELLIKLEWKA--RNGTGV 140
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTREL++QT + +++ + + GG ++E ++ +G+S LVATPGRLL
Sbjct: 141 IVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAEAQKLARGVSFLVATPGRLL 200
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
DH ++T+ ++ L++DEADRILD G+E ++ + L +L K++ Q++ SAT TP
Sbjct: 201 DHLQNTDGFMVKNLKCLIIDEADRILDIGFEIEMQQILRVLPKKR---QTMFFSATQTP 256
>gi|28571808|ref|NP_732694.2| pitchoune, isoform B [Drosophila melanogaster]
gi|28571809|ref|NP_524446.3| pitchoune, isoform A [Drosophila melanogaster]
gi|33860195|sp|Q9VD51.2|DDX18_DROME RecName: Full=Probable ATP-dependent RNA helicase pitchoune
gi|17945959|gb|AAL49024.1| RE48840p [Drosophila melanogaster]
gi|21429110|gb|AAM50274.1| LD46167p [Drosophila melanogaster]
gi|28381409|gb|AAF55951.2| pitchoune, isoform A [Drosophila melanogaster]
gi|28381410|gb|AAN13900.2| pitchoune, isoform B [Drosophila melanogaster]
gi|220946416|gb|ACL85751.1| pit-PA [synthetic construct]
gi|220956056|gb|ACL90571.1| pit-PA [synthetic construct]
Length = 680
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 280/513 (54%), Gaps = 62/513 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 378
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 379 IEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 428
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 429 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 481
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 482 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 541
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 542 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 578
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 579 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAA 636
Query: 888 KNKEELKN---------KKM---AINKEKSFKQ 908
K + K KKM + +K++ FKQ
Sbjct: 637 KRERPEKRVGGGGFGFYKKMNEGSASKQRHFKQ 669
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 377
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 378 RIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 437
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 438 VFFSSCMS 445
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 332 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 388
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 389 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 434
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 435 KVMVFFSSCMSVKYHHELFN 454
>gi|290991785|ref|XP_002678515.1| DEAD/DEAH box helicase family protein [Naegleria gruberi]
gi|284092128|gb|EFC45771.1| DEAD/DEAH box helicase family protein [Naegleria gruberi]
Length = 478
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 261/472 (55%), Gaps = 42/472 (8%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q SI L G D+L +++TGSGKTLA+ +P ++ L R + ++G +I+ P
Sbjct: 1 MTPIQARSIPIALAGKDLLAQAKTGSGKTLAFLLPCLELL--YRAEFKPRNGTGVIILSP 58
Query: 475 TRELALQTLEIFTKLCKS---FTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
TRELA+QT + CKS F L GG+ E ++ KG +I++ATPGRLLDH
Sbjct: 59 TRELAIQTYAV----CKSLMTFMKQTHCLLIGGQSKHQEGEKLVKGCNIVIATPGRLLDH 114
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
HT+ +S + LVLDEADR+LD G+E ++ +++L + Q ++L SAT T V
Sbjct: 115 LLHTKGFVYSNLISLVLDEADRMLDDGFEEELKAIVKLLPTKGRQ--TLLFSATQTTKVA 172
Query: 592 RLAGMTLQ-NPIQIDAADSTDIHNT--TDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+A ++++ +P+ + D I T T+ +L+Q ++V P + V L SF+
Sbjct: 173 DIARVSIKRDPVFVGIEDLNKITKTEETEEYSTATNLEQGYVVVPASEKFVLLYSFLKKT 232
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ Y++ELL+ + N++ LHG M Q++RT+ F F
Sbjct: 233 MATTPGKKGKKIIVFFSSCAAVKYYSELLNYI---NVSVTPLHGKMKQNKRTQAFMNFCG 289
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+SGVL+ TDVAARGLD+P VDWIVQY P + +Y+HRVGRTAR G+ G +LLFL+PSE
Sbjct: 290 AESGVLLSTDVAARGLDIPKVDWIVQYDPPEAPKEYIHRVGRTARAGNVGRALLFLLPSE 349
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
++ L I + E+ D R T + +Q E +
Sbjct: 350 TGFLKYLSESNIPLNEL----------------DFPR-------TKMSNIQDQLEKIISS 386
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L +A + + +++ YAS+ L+ IF+F+ + + KSF L++ P V
Sbjct: 387 NYYLFKNAEEAFKGFIKSYASHP--LKDIFSFQLLDVAGITKSFGLKNTPYV 436
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 69/328 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI L G D+L +++TGSGKTLA+ +P ++ L R + ++G +I+ P
Sbjct: 1 MTPIQARSIPIALAGKDLLAQAKTGSGKTLAFLLPCLELL--YRAEFKPRNGTGVIILSP 58
Query: 66 TRELALQTLEIFTKLCKS---FTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
TRELA+QT + CKS F L GG+ E ++ KG +I++ATPGRLLDH
Sbjct: 59 TRELAIQTYAV----CKSLMTFMKQTHCLLIGGQSKHQEGEKLVKGCNIVIATPGRLLDH 114
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
HT+ +S + LVLDEADR+LD G+E ++ +++L + Q++L SAT T
Sbjct: 115 LLHTKGFVYSNLISLVLDEADRMLDDGFEEELKAIVKLLPTKGR--QTLLFSATQT---- 168
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
+A+ + K+ P F
Sbjct: 169 ------------------------------TKVADIARVSIKRDPVF------------- 185
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
+ +++ +I + T+ ++T +L+Q ++V P + V L SF+
Sbjct: 186 -----VGIEDLNKITKTEETEEYSTA------TNLEQGYVVVPASEKFVLLYSFLKKTMA 234
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLS 330
+ K++VF ++ Y++ELL+
Sbjct: 235 TTPGKKGKKIIVFFSSCAAVKYYSELLN 262
>gi|344231947|gb|EGV63826.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 552
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 270/492 (54%), Gaps = 49/492 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 104 EDMGFKTMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLYSL--KFKPRNGT 161
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
V+I PTRELALQ + +L T + GG + E +++KG+++L+ATPGR
Sbjct: 162 GVVVISPTRELALQIFGVARELLAHHTQTF-GIVIGGANRRQEAEKLQKGVNLLIATPGR 220
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++TE F + L++DEADRIL+ G+E ++ + ++IL K+ + Q++L SAT T
Sbjct: 221 LLDHLQNTEGFVFRNLRALIIDEADRILEIGFEDEMKQIIKILPKE--ERQTMLFSATQT 278
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ T+I D L+Q ++ R + L SF+
Sbjct: 279 TKVEDLARISLRPGPLYINVVPETEISTA-------DGLEQGYVTCESDKRFLLLFSFL- 330
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+NV + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F
Sbjct: 331 --KRNV----KKKIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEF 381
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL+
Sbjct: 382 CNAKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTDGKGKSLMFLL 441
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSE+ + L+ + + E E ++A NV++ T L
Sbjct: 442 PSELGFLRYLKAANVPLNE--------------YEFPTKKIA--NVQSQLTKL------- 478
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ LH SA GY ++++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 479 IKSNYWLHQSAKDGYRAYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDIPPKVNITIG 536
Query: 886 KPKNKEELKNKK 897
E K+KK
Sbjct: 537 ASGKSIEKKHKK 548
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 106 MGFKTMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLYSL--KFKPRNGTGV 163
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELALQ + +L T + GG + E +++KG+++L+ATPGRLL
Sbjct: 164 VVISPTRELALQIFGVARELLAHHTQTF-GIVIGGANRRQEAEKLQKGVNLLIATPGRLL 222
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++TE F + L++DEADRIL+ G+E ++ + ++IL K+ + Q++L SAT T
Sbjct: 223 DHLQNTEGFVFRNLRALIIDEADRILEIGFEDEMKQIIKILPKE--ERQTMLFSATQT 278
>gi|143456390|sp|Q0DBS1.2|RH51_ORYSJ RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 51
gi|53792028|dbj|BAD54613.1| putative myc-regulated DEAD/H box 18 RNA helicase [Oryza sativa
Japonica Group]
Length = 590
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 283/517 (54%), Gaps = 42/517 (8%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI P++ G DV+ ++TGSGKTLA+ IP I+ L +R S ++G
Sbjct: 104 MNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLR--FSPRNGTGV 161
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L + + + ++ GG ++ E ++ KGI++LVATPGRLL
Sbjct: 162 IVLCPTRELAIQTHNVAKELMRYHSQTL-GYVIGGIDLRGEAEQLAKGINVLVATPGRLL 220
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH + T++ K+ ++ L++DEADRIL+Q +E + + ++L +Q Q ++L SAT T
Sbjct: 221 DHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQ--TVLFSATQTEK 278
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTD---SLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ A +T + + T ++ D S + LKQ + V P + R + L +F+
Sbjct: 279 VEDFAKLTFGSK---EERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLK 335
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
E++K++VF ++ + +H +LL+ + I + +HG + Q +RT F F
Sbjct: 336 KAL-----SEKTKVMVFFSSCNSVKFHAQLLNFI---QIECYDIHGQLKQHQRTSTFFKF 387
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLI 765
+ G+L+CT+VAARGLD+P VD+IVQY P + DY+HRVGRTAR + +GS++LFL+
Sbjct: 388 HKAEHGILLCTNVAARGLDIPDVDYIVQYDPPDETKDYIHRVGRTARGDNGKGSAILFLL 447
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E++L+ L+ I + E + L L + D S E
Sbjct: 448 PKELQLLIHLKAANISVSEYVFRQELVPKLQPYLHYDSS---------------FEQEKI 492
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI---- 881
V IL+ SA + Y S++ Y S+S ++ IF Q+ L A SF + P V
Sbjct: 493 VGGNYILNRSAKEAYKSYLLAYKSHS--MKDIFAIHQLDLTSVAASFCFSEPPKVNLDLE 550
Query: 882 SGIGKPKNKEELK-NKKMAINKEKSFKQRGNFSKKQM 917
S K + K + ++ I + ++G+ ++Q
Sbjct: 551 SSASKHRKKRNVNTGRRHGIGPSNPYGRKGSDDRRQF 587
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 118/178 (66%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI P++ G DV+ ++TGSGKTLA+ IP I+ L +R S ++G
Sbjct: 104 MNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLR--FSPRNGTGV 161
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L + + + ++ GG ++ E ++ KGI++LVATPGRLL
Sbjct: 162 IVLCPTRELAIQTHNVAKELMRYHSQTL-GYVIGGIDLRGEAEQLAKGINVLVATPGRLL 220
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T++ K+ ++ L++DEADRIL+Q +E + + ++L +Q Q++L SAT T
Sbjct: 221 DHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGR--QTVLFSATQT 276
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T++ K+ ++ L++DEADRIL+Q +E + + ++L +Q Q+VL SAT T V+ A
Sbjct: 226 TKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGR--QTVLFSATQTEKVEDFA 283
Query: 247 GMTLQNPIQIDAADSTDIHNTTD---SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
+T + + T ++ D S + LKQ + V P + R + L +F+
Sbjct: 284 KLTFGSK---EERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLKKAL-- 338
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
E++K++VF ++ + +H +LL+
Sbjct: 339 ---SEKTKVMVFFSSCNSVKFHAQLLN 362
>gi|431894767|gb|ELK04560.1| ATP-dependent RNA helicase DDX18 [Pteropus alecto]
Length = 663
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 268/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 190 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGI 247
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 248 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLVMGGSNRSAEAQKLANGINIIVATPGR 304
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 305 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 361
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 362 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 413
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 414 ------KKNRKKKLMVFFSSCKSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQF 464
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ +G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 465 CNADTGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 524
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 525 PEELGFLRYLKQSKVPLSE--------------FEFSWSKISD---------IQSQLEKL 561
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IF+ ++L A SF + P V
Sbjct: 562 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFDVNNLNLPQVALSFGFKVPPFV 614
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 161/332 (48%), Gaps = 84/332 (25%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 190 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGI 247
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 248 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLVMGGSNRSAEAQKLANGINIIVATPGR 304
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 305 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 361
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
R + + I K++P + V
Sbjct: 362 ----------------------------------RKVEDLARISLKKEPLYVGV------ 381
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
D + T D L +Q ++V P + R + L +F+
Sbjct: 382 ---------------------DDDKANATVDGL------EQGYVVCPSEKRFLLLFTFL- 413
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 414 ------KKNRKKKLMVFFSSCKSVKYHYELLN 439
>gi|413932761|gb|AFW67312.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 649
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 263/479 (54%), Gaps = 56/479 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L S ++G A
Sbjct: 170 MNYTHLTQIQARSIPHLLEGNDVMGAAKTGSGKTLAFLIPAIEMLYHTH--FSPRNGTGA 227
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L K + + ++ GG +SE ++ KGI++LVATPGRLL
Sbjct: 228 IVVCPTRELAIQTHNVAKELMKYHSQTL-RYVIGGNNRRSEADQLAKGINLLVATPGRLL 286
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T++ + +++ LV+DEADRIL+Q +E D+ + + L + + Q++L SAT TP
Sbjct: 287 DHLQNTKSFIYRRLKCLVIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQTPE 343
Query: 590 VQRLAGMTLQN-------PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
V++ A ++ + P+ + D S + L+Q + V R + L
Sbjct: 344 VEKFAKLSFEKNEESKKKPVYVGVDDDK-------SKATVEGLQQGYCVISSDKRFLVLY 396
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ K K++VF ++ + +H ELL+ LG I +HG Q +RT
Sbjct: 397 AFLRKK-------RNKKIMVFFSSCNSVKFHAELLN-FLG--IECSDIHGKQKQQKRTTT 446
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSL 761
F +F + G+L+CT+VAARGLD+P VD+I+QY P DY+HRVGRTAR +GS+L
Sbjct: 447 FFSFCKAEKGILLCTNVAARGLDIPDVDYILQYDPPDEPKDYIHRVGRTARGEKGKGSAL 506
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL+P E+K + L+ ++ + E + + LQ
Sbjct: 507 LFLLPEELKFLIYLKAAKVTLTEYEFN-----------------------QKNVPNLQSQ 543
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E+ V + L+ SA + Y S+V Y S+S ++ IFN Q+ L A SF ++ P V
Sbjct: 544 LENIVGENYFLNQSAKEAYRSYVLAYDSHS--MKDIFNVHQLDLQKVAASFGFKNPPKV 600
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 125/195 (64%), Gaps = 14/195 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L S ++G A
Sbjct: 170 MNYTHLTQIQARSIPHLLEGNDVMGAAKTGSGKTLAFLIPAIEMLYHTH--FSPRNGTGA 227
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L K + + ++ GG +SE ++ KGI++LVATPGRLL
Sbjct: 228 IVVCPTRELAIQTHNVAKELMKYHSQTL-RYVIGGNNRRSEADQLAKGINLLVATPGRLL 286
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T++ + +++ LV+DEADRIL+Q +E D+ + + L + + Q++L SAT TP
Sbjct: 287 DHLQNTKSFIYRRLKCLVIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQTP- 342
Query: 181 TCWCKHTETLKFSKV 195
E KF+K+
Sbjct: 343 -------EVEKFAKL 350
>gi|398017352|ref|XP_003861863.1| DEAD-box helicase-like protein [Leishmania donovani]
gi|322500091|emb|CBZ35166.1| DEAD-box helicase-like protein [Leishmania donovani]
Length = 787
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 293/587 (49%), Gaps = 100/587 (17%)
Query: 389 PTSYEEFPG----IHPFMKKNLNEGMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKT 443
PT + P +HP + + L E M I +T +Q+L +LD DVLVRS+TGSGKT
Sbjct: 124 PTDIDSLPALVELVHPKLFRPLTESMKIEHLTRIQKLCWAAMLDSDSDVLVRSETGSGKT 183
Query: 444 LAYAIPIIQKL--QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
LAYA+P + +L + + ISR G +I+ PTREL LQ E T L + +I +
Sbjct: 184 LAYALPTLHRLLVECDKTPISRDVGTLIIIMCPTRELVLQVTETVTTLVRCAQFITVGGI 243
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
GGE EKAR+RKG+ ILV TPGRLLDH K T + + + +++DEADR+LD G+E+
Sbjct: 244 HGGENRHKEKARLRKGLPILVTTPGRLLDHLKTTSSFTVAHAQTVIMDEADRLLDMGFEK 303
Query: 562 DIAEFLEILKKQ---KPQFQSILLSATLTPAVQRLAGMTLQNPI---------------- 602
+ E +E+L+++ + +L+SAT+T V+RL+ L+ I
Sbjct: 304 ALREIMELLERKCHHASDMKRVLVSATITEGVERLSHFALRRNIVRIGETQDTFSVPTTL 363
Query: 603 ----------------------QIDA-----------ADSTD-IHNTTDSLVIPDSLKQH 628
Q+DA ADST+ ++ L P + +
Sbjct: 364 KQHYVMVPVKHRLSVLLSFLRSQLDAGANKIIVFVSTADSTEFLYLLASRLQSPFHRRSY 423
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE----------LLS 678
+ R ++++ + + N + D S + +D++D E L
Sbjct: 424 EGKVVTRSRGASMSTKKMVEAANRHLDNGSATDEVVTFEDVSDEEIEGDARLDSTATLRR 483
Query: 679 TVLGENIAFFKLHGSMSQSERTEVFKTFR-------SVKSGVLICTDVAARGLDLPLVDW 731
L N+ FKLHG+MSQ +R VF F+ S KS VL CTDVAARGLD+P +DW
Sbjct: 484 AFLDANV--FKLHGNMSQVDRAAVFHAFKFGTRKSHSDKS-VLFCTDVAARGLDMPRIDW 540
Query: 732 IVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE----------VKLVEELQNRR-- 779
IV Y P T YVHR+GRTAR+G+ G S+LFL P E + L + N R
Sbjct: 541 IVHYDPPIDPTSYVHRIGRTARIGNSGDSILFLAPDERGYAAYLTHFIHLQMQQSNSREA 600
Query: 780 IRIEEIKLKDCLQNLLSVKMEGDLSRL---ADGNVETAAT--ALQMSFESAVLQQKILHT 834
+ E K + L L K++ + + + + +E A + A+Q E V ++ L+
Sbjct: 601 AEMSERKYETFLFYL--TKLDPNSNHMWMQSTATLERAISRLAMQRDAERGVDAKESLYR 658
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
A Y S++R YA + + +F F +HLGH A+SF + +PS +
Sbjct: 659 VALFAYQSYLRAYAGMPRQTKSLF-FSTLHLGHVAQSFGIDKSPSEV 704
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 118/192 (61%), Gaps = 6/192 (3%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDG 57
M I +T +Q+L +LD DVLVRS+TGSGKTLAYA+P + +L + + ISR G
Sbjct: 149 MKIEHLTRIQKLCWAAMLDSDSDVLVRSETGSGKTLAYALPTLHRLLVECDKTPISRDVG 208
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+I+ PTREL LQ E T L + +I + GGE EKAR+RKG+ ILV TPG
Sbjct: 209 TLIIIMCPTRELVLQVTETVTTLVRCAQFITVGGIHGGENRHKEKARLRKGLPILVTTPG 268
Query: 118 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ---KPQFQSILLS 174
RLLDH K T + + + +++DEADR+LD G+E+ + E +E+L+++ + +L+S
Sbjct: 269 RLLDHLKTTSSFTVAHAQTVIMDEADRLLDMGFEKALREIMELLERKCHHASDMKRVLVS 328
Query: 175 ATLTPATCWCKH 186
AT+T H
Sbjct: 329 ATITEGVERLSH 340
>gi|427797681|gb|JAA64292.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 531
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 275/496 (55%), Gaps = 52/496 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
EGM ++T +Q +I +L+G DV+ ++TGSGKTLA+ IP ++ L ++ K ++G
Sbjct: 53 EGMGFKRMTEIQAKTIPHLLEGKDVVAAAKTGSGKTLAFLIPAVELLYKL--KFMPRNGT 110
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A++I PTRELA+QT + +L + + GG +SE +++ KG++ LVATPGR
Sbjct: 111 GALVIAPTRELAMQTFGVLQELLSGQNQTL-GLIMGGTNRQSEASKLAKGVNFLVATPGR 169
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +++ + ++ L++DEADRILD G+E ++ + L IL K++ Q++L SATLT
Sbjct: 170 LLDHLQNSSEFVYKNLQCLIIDEADRILDIGFEEEVKQILRILPKRR---QTMLFSATLT 226
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
+ L + L++ P+ I + N + V + L+Q ++V P R + L +F+
Sbjct: 227 KKTEDLVKVALKSEPLYIGLDE-----NKEQATV--EGLEQGYVVCPSDKRFLLLFTFL- 278
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 279 ------KKNRKKKVMVFFSSCLSVKYHHELLNYI---DLPVMSIHGKQKQAKRTTTFFQF 329
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLI 765
+ +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L
Sbjct: 330 CNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGEGGRGHALLILR 389
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P EV + L+ ++ ++E E +++A+ +Q E
Sbjct: 390 PEEVGFLRYLKVAKVPLQE--------------FEFSWAKIAN---------IQPQLEKL 426
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + LH SA + Y ++VR Y S+ L+ IF+ + L AKSF P+V +G
Sbjct: 427 ISKNYYLHMSAKEAYKAYVRAYDSHH--LKSIFDVNTLDLIQVAKSFGFLVPPNVDLNVG 484
Query: 886 KPKNKEELKNKKMAIN 901
NK + K A N
Sbjct: 485 --SNKARPRKKGRAAN 498
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I +L+G DV+ ++TGSGKTLA+ IP ++ L ++ K ++G A
Sbjct: 55 MGFKRMTEIQAKTIPHLLEGKDVVAAAKTGSGKTLAFLIPAVELLYKL--KFMPRNGTGA 112
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L + + GG +SE +++ KG++ LVATPGRLL
Sbjct: 113 LVIAPTRELAMQTFGVLQELLSGQNQTL-GLIMGGTNRQSEASKLAKGVNFLVATPGRLL 171
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DEADRILD G+E ++ + L IL K++ Q++L SATLT
Sbjct: 172 DHLQNSSEFVYKNLQCLIIDEADRILDIGFEEEVKQILRILPKRR---QTMLFSATLTKK 228
Query: 181 T 181
T
Sbjct: 229 T 229
>gi|452844095|gb|EME46029.1| hypothetical protein DOTSEDRAFT_168285 [Dothistroma septosporum
NZE10]
Length = 465
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 272/501 (54%), Gaps = 49/501 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 7 MPFDTMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLHSLRFK--PRNGTGV 64
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 65 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 123
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q ++L SAT T
Sbjct: 124 DHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKEDRQ--TMLFSATQTTK 181
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D+ + H+T L +Q +++ +R L +F+
Sbjct: 182 VEDLARISLRPGPLYINV-DNAEEHSTVAGL------EQGYVICDSDMRFRLLFTFL--- 231
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
K++VF ++ + Y++ELL+ + ++ LHG Q +RT F F +
Sbjct: 232 ----KRHPNKKIIVFFSSCNCVKYYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 284
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 285 AKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANAKGKSLMFLQPS 344
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ ++ + E ++ ++ D +Q E +
Sbjct: 345 EVGFLNHLKEAKVPLVEFEIPP--------------KKILD---------IQSQLELLIG 381
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA GY S+++ YAS+S LR +FN + L AK F P V +G
Sbjct: 382 KNYYLNKSAKDGYRSYLQAYASHS--LRSVFNIHNLDLKKVAKGFGFGVPPKVDINLGAS 439
Query: 888 KNKEELKNKKMAINKEKSFKQ 908
K + + ++ F Q
Sbjct: 440 MKKPDQARRAYGSQPKQKFSQ 460
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 7 MPFDTMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLHSLRFK--PRNGTGV 64
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 65 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 123
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 124 DHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKEDR--QTMLFSATQT 179
>gi|346465817|gb|AEO32753.1| hypothetical protein [Amblyomma maculatum]
Length = 580
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 272/495 (54%), Gaps = 50/495 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K + E M Q+T +Q +I +L+G DV+ ++TGSGKTLA+ +P ++ L ++ K
Sbjct: 97 KAITETMGFKQMTEIQAKTIPHLLEGRDVVAAAKTGSGKTLAFLVPAVELLSKL--KFMP 154
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G A++I PTRELA+QT + +L + + GG +SE A++ KG+++LVA
Sbjct: 155 RNGTGALVIAPTRELAMQTFGVLQELLSGQNQTL-GLIMGGTNRQSEAAKLAKGVNLLVA 213
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T + ++ L++DEADRILD G+E ++ + L IL K++ Q++L S
Sbjct: 214 TPGRLLDHLQNTSEFVYKNLQCLIIDEADRILDIGFEEEMKQILRILPKRR---QTMLFS 270
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
ATLT + L + L++ P+ I + + + L+Q ++V P R + L
Sbjct: 271 ATLTKKTEDLVKVALKSEPLYIGLDEGKEQATV-------EGLEQGYVVCPSDKRFLLLF 323
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ YH ELL+ + ++ +HG Q++RT
Sbjct: 324 TFL-------KKNRKKKVMVFFSSCLSVKYHHELLNYI---DLPVMSIHGKQKQAKRTTT 373
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
F F + + G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +L
Sbjct: 374 FFQFCNSECGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGEGGRGHAL 433
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L L P EV + L+ ++ ++E E S++A+ +Q
Sbjct: 434 LILRPEEVGFLRYLKVAKVPLQEF--------------EFSWSKIAN---------IQPQ 470
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E + + LH SA + Y ++VR Y S+ L+ IF+ + L AKSF P+V
Sbjct: 471 LEKLISKNYYLHMSAKEAYKAYVRAYDSHH--LKSIFDVNTLDLIQVAKSFGFLVPPNVD 528
Query: 882 SGIGKPKNKEELKNK 896
+G K + K +
Sbjct: 529 LHVGSSKARPRKKGR 543
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 136/222 (61%), Gaps = 19/222 (8%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M Q+T +Q +I +L+G DV+ ++TGSGKTLA+ +P ++ L ++ K ++G A
Sbjct: 103 MGFKQMTEIQAKTIPHLLEGRDVVAAAKTGSGKTLAFLVPAVELLSKL--KFMPRNGTGA 160
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L + + GG +SE A++ KG+++LVATPGRLL
Sbjct: 161 LVIAPTRELAMQTFGVLQELLSGQNQTL-GLIMGGTNRQSEAAKLAKGVNLLVATPGRLL 219
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ L++DEADRILD G+E ++ + L IL K++ Q++L SATLT
Sbjct: 220 DHLQNTSEFVYKNLQCLIIDEADRILDIGFEEEMKQILRILPKRR---QTMLFSATLT-- 274
Query: 181 TCWCKHTETL-KFS-KVEHLVLDEADRILDQGYERDIAEFLE 220
K TE L K + K E L + LD+G E+ E LE
Sbjct: 275 ----KKTEDLVKVALKSEPLYIG-----LDEGKEQATVEGLE 307
>gi|449279979|gb|EMC87401.1| ATP-dependent RNA helicase DDX18, partial [Columba livia]
Length = 544
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 268/479 (55%), Gaps = 51/479 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K +N+ M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K
Sbjct: 66 KGIND-MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMP 122
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +I+ PTRELA+QT + +L + GG +E ++ GI+++VA
Sbjct: 123 RNGTGVIILSPTRELAMQTYGVLKELMNHHVHTY-GLIMGGSNRSAEAQKLGNGINVIVA 181
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L S
Sbjct: 182 TPGRLLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFS 238
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++L+ P+ + D+ + D L+Q ++V P + R + L
Sbjct: 239 ATQTRKVEDLAKISLKKEPLYVGVDDNKETATV-------DGLEQGYVVCPSEKRFLLLF 291
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ YH ELL+ + ++ +HG Q++RT
Sbjct: 292 TFL-------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQTKRTTT 341
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +L
Sbjct: 342 FFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHAL 401
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L L P E+ + L+ R+ + E E S+++D +Q
Sbjct: 402 LILRPEELGFLRYLKQARVPLSE--------------FEFSWSKISD---------IQSQ 438
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E + + LH SA + Y +++R Y S+S L+ I++ + L + SF + P V
Sbjct: 439 LEKLIEKNYFLHKSAQEAYKAYIRAYDSHS--LKQIYDVNNLDLPKVSLSFGFKVPPFV 495
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 71 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 128
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+++VATPGRLL
Sbjct: 129 IILSPTRELAMQTYGVLKELMNHHVHTY-GLIMGGSNRSAEAQKLGNGINVIVATPGRLL 187
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 188 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 242
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T V+
Sbjct: 191 QNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQTRKVED 247
Query: 245 LAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L+ P+ + D+ + D L+Q ++V P + R + L +F+
Sbjct: 248 LAKISLKKEPLYVGVDDNKETATV-------DGLEQGYVVCPSEKRFLLLFTFL------ 294
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ YH ELL+
Sbjct: 295 -KKNRKKKLMVFFSSCMSVKYHYELLN 320
>gi|449507686|ref|XP_002193612.2| PREDICTED: ATP-dependent RNA helicase DDX18 [Taeniopygia guttata]
Length = 679
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 267/479 (55%), Gaps = 51/479 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K +N+ M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K
Sbjct: 201 KGIND-MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMP 257
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +I+ PTRELA+QT + +L + GG +E ++ GI+I+VA
Sbjct: 258 RNGTGVIILSPTRELAMQTYGVLKELMNHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVA 316
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L S
Sbjct: 317 TPGRLLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFS 373
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++L+ P+ + D+ + D L+Q ++V P + R + L
Sbjct: 374 ATQTRKVEDLAKISLKKEPLYVGVDDNKETATV-------DGLEQGYVVCPSEKRFLLLF 426
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ YH ELL+ + ++ +HG Q++RT
Sbjct: 427 TFL-------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQTKRTTT 476
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +L
Sbjct: 477 FFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHAL 536
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L L P E+ + L+ R+ + E E S+++D +Q
Sbjct: 537 LILRPEELGFLRYLKQARVPLSEF--------------EFSWSKISD---------IQSQ 573
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E + + LH SA + Y +++R Y S+S L+ I++ + L SF + P V
Sbjct: 574 LEKLIEKNYFLHKSAQEAYKAYIRAYDSHS--LKQIYDVNNLDLPKVCLSFGFKVPPFV 630
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 206 MGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 263
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 264 IILSPTRELAMQTYGVLKELMNHHVHTY-GLIMGGSNRSAEAQKLGNGINIIVATPGRLL 322
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 323 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRR---QTMLFSATQT 377
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G +I+ P
Sbjct: 1 MTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGVIILSP 58
Query: 66 TRELALQTLEIFTKL 80
TRELA+QT + +L
Sbjct: 59 TRELAMQTYGVLKEL 73
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G +I+ P
Sbjct: 1 MTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGVIILSP 58
Query: 475 TRELALQTLEIFTKL 489
TRELA+QT + +L
Sbjct: 59 TRELAMQTYGVLKEL 73
>gi|193290168|ref|NP_001123270.1| pitchoune [Nasonia vitripennis]
Length = 643
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 269/482 (55%), Gaps = 50/482 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +SI P+L+G D++ ++TGSGKTL++ IP ++ + ++ K ++G
Sbjct: 159 MGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKL--KFMPRNGTGC 216
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + + L GG ++E ++ KG++I+VATPGRLL
Sbjct: 217 IIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLSKGVNIVVATPGRLL 275
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ L++DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 276 DHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRR---QTMLFSATQTKK 332
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + ++ P+ + D + + L+Q ++ P + R + L +F+
Sbjct: 333 TEALTTLAVKKEPVYVGVDDEKEKATV-------EGLEQGYVACPSEKRFLLLFTFL--- 382
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 383 ----KKNRQKKVMVFFSSCMSVKYHHELLNYI---DLPVMSIHGKQKQTKRTTTFFQFCN 435
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 436 AQSGILLCTDVAARGLDIPDVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 495
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ R+ + E E +++AD +Q+ E +
Sbjct: 496 ELGFLRYLKQARVPVNEF--------------EFSWNKIAD---------IQLQMEKLIS 532
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + ++VR Y S+ L+ IF+ + + L AKSF P+V +G
Sbjct: 533 KNYFLNMSAKEAFKAYVRAYDSHH--LKQIFDVETLDLTKVAKSFGFTTPPAVDLKVGVS 590
Query: 888 KN 889
K+
Sbjct: 591 KD 592
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 145/248 (58%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +SI P+L+G D++ ++TGSGKTL++ IP ++ + ++ K ++G
Sbjct: 159 MGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKL--KFMPRNGTGC 216
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + + L GG ++E ++ KG++I+VATPGRLL
Sbjct: 217 IIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLSKGVNIVVATPGRLL 275
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ L++DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 276 DHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRR---QTMLFSATQTKK 332
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
T T +K V V DE ++ L+QGY E+ LKK + +
Sbjct: 333 T-EALTTLAVKKEPVYVGVDDEKEKATVEGLEQGYVACPSEKRFLLLFTFLKKNRQKKVM 391
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 392 VFFSSCMS 399
>gi|50302969|ref|XP_451422.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607669|sp|Q6CXB7.1|HAS1_KLULA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49640553|emb|CAH03010.1| KLLA0A09669p [Kluyveromyces lactis]
Length = 497
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 264/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M TQ+T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 52 MGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGTGV 109
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 110 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLMKGVNILIATPGRLL 168
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 169 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDRQ--SMLFSATQTTK 226
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D D L+Q ++V R + L SF+
Sbjct: 227 VEDLARISLRPGPLFINVDSEKDTSTA-------DGLEQGYVVCESDKRFLLLFSFL--- 276
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F +
Sbjct: 277 ----KRNQKKKVIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCN 329
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL P+
Sbjct: 330 AERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPT 389
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A+ +Q E +
Sbjct: 390 ELGFLRYLKAAKVPLNE--------------YEFPTNKIAN---------VQAQLEKLIK 426
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
LH A GY S+++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 427 SNYYLHQIAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 482
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M TQ+T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 52 MGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGTGV 109
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 110 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLMKGVNILIATPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 169 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDR--QSMLFSATQT 224
>gi|195330913|ref|XP_002032147.1| GM26397 [Drosophila sechellia]
gi|194121090|gb|EDW43133.1| GM26397 [Drosophila sechellia]
Length = 680
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 280/513 (54%), Gaps = 62/513 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 378
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 379 IEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 428
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 429 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 481
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 482 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 541
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 542 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 578
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 579 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAA 636
Query: 888 KNKEELKN---------KKM---AINKEKSFKQ 908
K + K KKM + +K++ FKQ
Sbjct: 637 KRERPEKRVGGGGFGFYKKMNEGSASKQRHFKQ 669
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 377
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 378 RIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 437
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 438 VFFSSCMS 445
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 332 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 388
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 389 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 434
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 435 KVMVFFSSCMSVKYHHELFN 454
>gi|255576631|ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 590
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 272/505 (53%), Gaps = 52/505 (10%)
Query: 378 RLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQ 437
+++ + + S+E G+ +K + E M +T +Q +I P+L G DVL ++
Sbjct: 92 KVRKRGSGIMSTDSFESL-GLSEPTRKAIQE-MGFQYLTQIQARAIPPLLVGKDVLGAAR 149
Query: 438 TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIV 497
TGSGKTLA+ IP ++ L + + ++G V+I PTRELA+QT + L K + +
Sbjct: 150 TGSGKTLAFLIPAVELLYNVH--FAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTL 207
Query: 498 PSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQ 557
+ GG K E RI KG+++LVATPGRLLDH ++T+ + ++ L++DEADRIL+
Sbjct: 208 -GLVIGGSARKGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEA 266
Query: 558 GYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTT 616
+E ++ + ++IL K + Q+ L SAT T V+ LA ++ Q P+ ID D
Sbjct: 267 NFEEEMKQIIKILPKSR---QTALFSATQTKKVEDLARLSFQITPVYIDVDDGR------ 317
Query: 617 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 676
+ V + L+Q + V R + L SF+ + K++VF ++ + +H+EL
Sbjct: 318 -TKVTNEGLQQGYCVVHSAKRFILLYSFL-------KRNLSKKVMVFFSSCNSVKFHSEL 369
Query: 677 LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
L + + F +HG Q +RT F F + G+L+CTDVAARGLD+P VDWIVQY
Sbjct: 370 LRYI---QVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 426
Query: 737 APSSSTDYVHRVGRTARV-GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
P +Y+HRVGRTAR G +G++LLFLIP E++ + L+ ++ ++E
Sbjct: 427 PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKE----------- 475
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
E D+ +LA+ +Q E V L+ SA Y S++ Y S+S ++
Sbjct: 476 ---YEFDVKKLAN---------VQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHS--MK 521
Query: 856 HIFNFKQIHLGHFAKSFALRDAPSV 880
IFN ++ L A SF P V
Sbjct: 522 DIFNVHRLDLQAVAASFCFSCPPKV 546
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + + ++G
Sbjct: 122 MGFQYLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLYNVH--FAPRNGTGV 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELA+QT + L K + + + GG K E RI KG+++LVATPGRLL
Sbjct: 180 VVICPTRELAIQTHAVAKDLLKYHSQTL-GLVIGGSARKGEAERIVKGVNLLVATPGRLL 238
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEADRIL+ +E ++ + ++IL K + Q+ L SAT T
Sbjct: 239 DHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKSR---QTALFSATQT 293
>gi|158293341|ref|XP_314700.4| AGAP008601-PA [Anopheles gambiae str. PEST]
gi|157016658|gb|EAA10183.4| AGAP008601-PA [Anopheles gambiae str. PEST]
Length = 611
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 282/511 (55%), Gaps = 66/511 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++R K ++G
Sbjct: 136 MGFTKMTEIQAKSIPPLLEGRDLIGSAKTGSGKTLAFLIPAVELIHKLRFK--PRNGAGV 193
Query: 470 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
++I PTRELA+Q E+ T C+++ L GG +E ++ KGI+I+VATP
Sbjct: 194 IVISPTRELAMQIFGVLKELMTYHCQTY-----GLLMGGASRHTENEKLEKGINIIVATP 248
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH K T F ++ L++DE DRIL+ G+E D+ + + IL K++ Q++L SAT
Sbjct: 249 GRLLDHLKSTPNFLFKNLQCLIIDECDRILEIGFEEDLKQIISILPKKR---QTMLFSAT 305
Query: 586 LTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ ++ L + L++ PI + D N ++ V L+Q +IV P + RL+ L +F
Sbjct: 306 QSSRLEELGKLALKSEPIYVGVDD-----NKKEATVT--GLEQGYIVCPSERRLLVLFTF 358
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++ + K++VF ++ +H EL + + ++ +HG QS+RT VF
Sbjct: 359 L-------KKNRKKKVMVFFSSCLSVKFHHELFNYI---DLPVMSIHGKQKQSKRTSVFF 408
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLL 762
F + ++G+L+CTDVAARGLD+P VDWIVQY P+ + +Y+HRVGRTAR G + G +LL
Sbjct: 409 QFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPNDTKEYIHRVGRTAR-GEDLCGHALL 467
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L P EV ++ L+ ++ + E E S++AD +Q+
Sbjct: 468 MLRPEEVGFLKYLKQAKVPLNE--------------FEFSWSKIAD---------IQLQL 504
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E+ + + L+ S + ++VR Y + ++ +FN + L AK+F P V
Sbjct: 505 ENLMAKNYFLNQSGKLAFKTYVRAYEGHH--MKDVFNIANLDLVQVAKNFGFTQPPYVDF 562
Query: 883 GIGKPKNKEELK--NKKMA----INKEKSFK 907
G + E + N+ M +NKEK K
Sbjct: 563 GKSFKLHNSERRPGNRGMGHFKTLNKEKEGK 593
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 14/180 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++R K ++G
Sbjct: 136 MGFTKMTEIQAKSIPPLLEGRDLIGSAKTGSGKTLAFLIPAVELIHKLRFK--PRNGAGV 193
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
++I PTRELA+Q E+ T C+++ L GG +E ++ KGI+I+VATP
Sbjct: 194 IVISPTRELAMQIFGVLKELMTYHCQTY-----GLLMGGASRHTENEKLEKGINIIVATP 248
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH K T F ++ L++DE DRIL+ G+E D+ + + IL K++ Q++L SAT
Sbjct: 249 GRLLDHLKSTPNFLFKNLQCLIIDECDRILEIGFEEDLKQIISILPKKR---QTMLFSAT 305
>gi|223590217|sp|A5DID7.2|HAS1_PICGU RecName: Full=ATP-dependent RNA helicase HAS1
gi|190346774|gb|EDK38940.2| hypothetical protein PGUG_03038 [Meyerozyma guilliermondii ATCC
6260]
Length = 569
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 271/491 (55%), Gaps = 51/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 123 MGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 180
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + L + + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARDLMAHHSQTL-GIVIGGANRRQEADKLMKGVNLLIATPGRLL 239
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 240 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLPSD--ERQSMLFSATQTTK 297
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ T++ D L+Q ++ +R + L SF+
Sbjct: 298 VEDLARISLRAGPLYINVVPETEVSTA-------DGLEQGYVTCDSDMRFLLLFSFLR-- 348
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+ + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 349 -RNIKK----KIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 400
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G +G SL+FL PS
Sbjct: 401 AKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTGGKGKSLMFLTPS 460
Query: 768 EVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ + + E + + + N+ S L++L GN
Sbjct: 461 ELGFLRYLKAANVPLNEYEFPTNKIANIQS-----QLTKLIKGNY--------------- 500
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
LH SA GY ++++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 501 ----WLHQSAKDGYRAYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNISIGA 554
Query: 887 PKNKEELKNKK 897
E K+KK
Sbjct: 555 SGKSIEKKHKK 565
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 123 MGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L + + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARDLMAHHSQTL-GIVIGGANRRQEADKLMKGVNLLIATPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 240 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLPSD--ERQSMLFSATQT 295
>gi|146418687|ref|XP_001485309.1| hypothetical protein PGUG_03038 [Meyerozyma guilliermondii ATCC
6260]
Length = 569
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 271/491 (55%), Gaps = 51/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 123 MGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 180
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + L + + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARDLMAHHSQTL-GIVIGGANRRQEADKLMKGVNLLIATPGRLL 239
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 240 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLPSD--ERQSMLFSATQTTK 297
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ T++ D L+Q ++ +R + L SF+
Sbjct: 298 VEDLARISLRAGPLYINVVPETEVSTA-------DGLEQGYVTCDSDMRFLLLFSFLR-- 348
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+ + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 349 -RNIKK----KIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 400
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G +G SL+FL PS
Sbjct: 401 AKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTGGKGKSLMFLTPS 460
Query: 768 EVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ + + E + + + N+ S L++L GN
Sbjct: 461 ELGFLRYLKAANVPLNEYEFPTNKIANIQS-----QLTKLIKGNY--------------- 500
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
LH SA GY ++++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 501 ----WLHQSAKDGYRAYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNISIGA 554
Query: 887 PKNKEELKNKK 897
E K+KK
Sbjct: 555 SGKSIEKKHKK 565
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 123 MGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L + + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARDLMAHHSQTL-GIVIGGANRRQEADKLMKGVNLLIATPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 240 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLPSD--ERQSMLFSATQT 295
>gi|356563121|ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 575
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 275/514 (53%), Gaps = 53/514 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + K + ++G
Sbjct: 108 MGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPAVELLYNV--KFTPRNGAGV 165
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT + +L K + + + GG K E RI KGI++LV TPGRLL
Sbjct: 166 IVICPTRELAIQTHAVAKELLKYHSQTL-GLVIGGSARKIEAERIAKGINLLVGTPGRLL 224
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + ++ L++DEADRIL+ +E ++ + ++IL K + Q+ L SAT T
Sbjct: 225 DHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNR---QTALFSATQTKK 281
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++ Q PI ID D + V + L Q ++V P R + L SF+
Sbjct: 282 VEDLARLSFQTTPIYIDVDDGR-------TKVTNEGLLQGYVVVPCAKRFIVLYSFL--- 331
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ + +H ++L+ + + +HG Q RT F F
Sbjct: 332 ----KRHQSKKVMVFFSSCNSVKFHADILNLI---QLNCSSIHGKQKQQSRTTTFFDFCK 384
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 385 AEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPE 444
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E D ++A+ +Q E+ V+
Sbjct: 445 ELQFLRYLKAAKVPVKEYAY--------------DEKKVAN---------VQSHLENLVV 481
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ A + Y S++ Y S+S ++ IFN + L A SF + P+V I
Sbjct: 482 NNFYLNKMAKEAYRSYILAYNSHS--MKDIFNIHHLDLQAVASSFCFSNPPNVSLNINSS 539
Query: 888 KNKEELK---NKKMAINKEKSFKQRGNFSKKQML 918
K + +++ + + + + +R K+Q +
Sbjct: 540 KQRNKMRKVDGSRHGFSGDNPYGKRNADDKRQFV 573
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + K + ++G
Sbjct: 108 MGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPAVELLYNV--KFTPRNGAGV 165
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L K + + + GG K E RI KGI++LV TPGRLL
Sbjct: 166 IVICPTRELAIQTHAVAKELLKYHSQTL-GLVIGGSARKIEAERIAKGINLLVGTPGRLL 224
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEADRIL+ +E ++ + ++IL K + Q+ L SAT T
Sbjct: 225 DHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNR---QTALFSATQT 279
>gi|212541586|ref|XP_002150948.1| ATP-dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
gi|210068247|gb|EEA22339.1| ATP-dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
Length = 584
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 280/514 (54%), Gaps = 58/514 (11%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVL 433
P + AL P + + P F + NL+E M +T +QQ +I P++ G DVL
Sbjct: 89 PSASALSLPQTGDSLP--TKFTELNLSERTLEAIKEMGFETMTEIQQRAIPPLMAGRDVL 146
Query: 434 VRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSF 493
++TGSGKTLA+ IP I+ L + K ++G +I+ PTRELALQ + +L
Sbjct: 147 GAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGVLILSPTRELALQIWGVARQLLDKH 204
Query: 494 TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADR 553
+ + GG ++E ++ KG+++LVATPGRLLDH ++T+ F + LV+DEADR
Sbjct: 205 SQ-THGIVMGGANRRAEAEKLEKGVNLLVATPGRLLDHLQNTKGFVFKNLRQLVIDEADR 263
Query: 554 ILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDI 612
IL+ G+E ++ + ++IL + Q+ L SAT T V+ LA ++L+ P+ I+ +
Sbjct: 264 ILEIGFEDEMKQIMKILGNG--ERQTSLFSATQTTKVEDLARISLKPGPLYINVVPR--M 319
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 672
N T D L+Q ++V P R + L SF+ + + K++VF+++ + +Y
Sbjct: 320 ENAT-----VDRLEQGYVVCEPDKRFLLLFSFL-------KRNLKKKIIVFLSSCNSVNY 367
Query: 673 HTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
++ELL+ + ++ +HG Q +RT F F + + G+LICTDVAARGLD+P +D++
Sbjct: 368 YSELLNYI---DLPVLSIHGKQKQQKRTSTFFEFVNSERGILICTDVAARGLDIPEIDYV 424
Query: 733 VQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL 791
VQY P DY+HRVGRTAR +G SL+FL PSE+ + L+ ++ + E +
Sbjct: 425 VQYDPPDDPRDYIHRVGRTARGAKAKGRSLMFLQPSEMGFLTHLKEAKVPVVEFEFPQ-- 482
Query: 792 QNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYS 851
+ +++V Q E + Q L+ SA +GY S++ YAS+S
Sbjct: 483 KKIINV---------------------QSQLEKLISQNYYLNKSAKEGYRSYINAYASHS 521
Query: 852 KDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
LR +F+ ++ L AKSF P V +G
Sbjct: 522 --LRSVFDVNKLDLVKIAKSFGFSTPPRVDITLG 553
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 110/178 (61%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P++ G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 123 MGFETMTEIQQRAIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGV 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 181 LILSPTRELALQIWGVARQLLDKHSQ-THGIVMGGANRRAEAEKLEKGVNLLVATPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F + LV+DEADRIL+ G+E ++ + ++IL + Q+ L SAT T
Sbjct: 240 DHLQNTKGFVFKNLRQLVIDEADRILEIGFEDEMKQIMKILGNG--ERQTSLFSATQT 295
>gi|145351031|ref|XP_001419891.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580124|gb|ABO98184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 485
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 275/520 (52%), Gaps = 52/520 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T VQ + P+L G DVL ++TGSGKTLA+ +P ++ L K ++G
Sbjct: 5 EQMGFKTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFLVPSVELL--YHAKFMPRNGT 62
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + +L + + + GG ++E R+ KG+++LVATPGR
Sbjct: 63 GVMVLSPTRELALQIYNVAQQLMEKHSQ-THGLIIGGANRRAEAERLIKGVNLLVATPGR 121
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T FS ++ V+DEADR+LD G+E ++ +++L K++ Q++L SAT T
Sbjct: 122 LLDHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKER---QTMLFSATQT 178
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++L++PI I DS + T ++Q + V P + R + L +F+
Sbjct: 179 TKVEDLARLSLKSPIYIGVDDSRAVSTAT-------GVEQGYCVVPSEQRFLLLFTFL-- 229
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ + YH ELL+ + +I +HG Q RT F F
Sbjct: 230 -----KKNLKKKIMVFFSSCNSVKYHAELLNYI---DIPVSDIHGKQKQQRRTTTFFEFC 281
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIP 766
GVL+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR +G +LLFLIP
Sbjct: 282 KADRGVLLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGTDGKGRALLFLIP 341
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ ++ L++ ++ + E E ++A+ +Q E V
Sbjct: 342 EELSFLKYLKSAKVPLNE--------------YEFPTKKIAN---------VQSQLEKLV 378
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
+ LHTSA Y +++ Y S++ L+ ++N + L A SF P V +
Sbjct: 379 EKNYYLHTSARDAYRAYILAYNSHT--LKDVYNVHALDLNAVASSFGFHKPPKVQLNLDS 436
Query: 887 PKNKEELKNKKMAINKEKSFKQRG---NFSKKQMLSEFDS 923
+K K++ +Q+G NFS + + DS
Sbjct: 437 KASKGRTKSRGDGGPGSDYRRQKGTGHNFSAENPYGKKDS 476
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ + P+L G DVL ++TGSGKTLA+ +P ++ L K ++G
Sbjct: 7 MGFKTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFLVPSVELL--YHAKFMPRNGTGV 64
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E R+ KG+++LVATPGRLL
Sbjct: 65 MVLSPTRELALQIYNVAQQLMEKHSQ-THGLIIGGANRRAEAERLIKGVNLLVATPGRLL 123
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T FS ++ V+DEADR+LD G+E ++ +++L K++ Q++L SAT T
Sbjct: 124 DHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKER---QTMLFSATQT 178
>gi|50295040|ref|XP_449931.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608117|sp|Q6FIL3.1|HAS1_CANGA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49529245|emb|CAG62911.1| unnamed protein product [Candida glabrata]
Length = 494
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 276/496 (55%), Gaps = 56/496 (11%)
Query: 399 HPFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
H F NL+ E M +++T VQ +I P++ G DVL ++TGSGKTLA+ +P I
Sbjct: 29 HSFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTI 88
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L + K ++G +II PTRELALQ + +L + F + GG + E
Sbjct: 89 ELLHSL--KFKPRNGTGVIIITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEA 145
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
++ KG+++LVATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL
Sbjct: 146 EKLMKGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILP 205
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
+ Q S+L SAT T V+ L+ ++L+ P+ I+ H+++ + D L+Q ++
Sbjct: 206 NEDRQ--SMLFSATQTTKVEDLSRISLRPGPLFINVVSE---HDSSTA----DGLEQGYV 256
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
V R + L SF+ +++ K++VF+++ + Y+ ELL+ + ++ +L
Sbjct: 257 VCESDKRFLLLFSFL-------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLEL 306
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG Q +RT F F + + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGR
Sbjct: 307 HGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGR 366
Query: 751 TAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
TAR +G SL+FLIP+E+ + L+ ++ + E E +++A+
Sbjct: 367 TARGTNGKGKSLMFLIPNELGFLRYLKAAKVPLNE--------------YEFPTNKIAN- 411
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
+Q E + LH +A GY S+++ YAS+S L+ ++ ++ L A
Sbjct: 412 --------VQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVA 461
Query: 870 KSFALRDAPSVISGIG 885
KS+ P V IG
Sbjct: 462 KSYGFPVPPKVNITIG 477
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T VQ +I P++ G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 47 MGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIELLHSL--KFKPRNGTGV 104
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 105 IIITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLMKGVNLLVATPGRLL 163
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 164 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 219
>gi|303312885|ref|XP_003066454.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106116|gb|EER24309.1| ATP-dependent RNA helicase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320031627|gb|EFW13587.1| ATP-dependent RNA helicase HAS1 [Coccidioides posadasii str.
Silveira]
Length = 604
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 266/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 142 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 199
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 200 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 258
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++TE F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 259 DHLQNTEGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQTTK 316
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 317 VEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL--- 366
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 367 ----KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 419
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 420 AKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPS 479
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L++ R+ + E + + +++V Q E +
Sbjct: 480 EVGFLKHLKDARVPVVEFEFP--AKKIVNV---------------------QSQLEKLIG 516
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
Q L+ SA GY S+++ YAS+S LR +F+ ++ L AK F P V +G
Sbjct: 517 QNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVNKLDLVKVAKGFGFPTPPRVDITLG 572
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 142 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 199
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 200 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 258
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++TE F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 259 DHLQNTEGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 314
>gi|410076008|ref|XP_003955586.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
gi|372462169|emb|CCF56451.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
Length = 496
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 264/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P++ G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 52 MGFTKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSL--KFKPRNGTGV 109
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 110 IVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLMKGVNILIATPGRLL 168
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 169 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQTTK 226
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D D L+Q ++V R + L SF+
Sbjct: 227 VEDLARISLRKGPLFINVVSEKDSSTA-------DGLEQGYVVCESDKRFLLLFSFL--- 276
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+++ K++VF+++ + YH ELL+ + ++ +LHG Q +RT F F +
Sbjct: 277 ----KRNQKKKIIVFLSSCNSVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCN 329
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 330 AERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLAPS 389
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A+ +Q E +
Sbjct: 390 ELGFLRYLKAAKVPLNE--------------YEFPTNKIAN---------VQSQLEKLIK 426
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
LH A GY S+++ YAS+S L+ ++ ++ L A+SF P V IG
Sbjct: 427 SNYYLHQIAKDGYRSYLQAYASHS--LKTVYQIDKLDLVKVARSFGFPIPPKVNITIG 482
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P++ G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 52 MGFTKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSL--KFKPRNGTGV 109
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 110 IVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLMKGVNILIATPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 169 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 224
>gi|296804908|ref|XP_002843302.1| ATP-dependent RNA helicase has1 [Arthroderma otae CBS 113480]
gi|238845904|gb|EEQ35566.1| ATP-dependent RNA helicase has1 [Arthroderma otae CBS 113480]
Length = 578
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 270/490 (55%), Gaps = 51/490 (10%)
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR----K 464
GM T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ ++ K +
Sbjct: 109 GMGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSLKFKPRNGMIFQ 168
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
G A+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ T
Sbjct: 169 LGTGALIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGT 227
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 584
PGRLLDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SA
Sbjct: 228 PGRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSA 285
Query: 585 TLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
T T V+ LA ++L+ P+ I+ D H+T D + +Q FI+ R + L S
Sbjct: 286 TQTTKVEDLARISLKPGPLYINV-DHKKEHSTVDGV------EQGFIICEAHKRFLLLFS 338
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ ++ + K++VF ++ + Y++ELL+ + ++ LHG + Q +RT F
Sbjct: 339 FL-------KKNAKKKIIVFFSSCNSVKYYSELLNYI---DLPVLSLHGKLKQQKRTNTF 388
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLL 762
F + G LICTDVAARGLD+P VD+IVQ P DY+HRVGRTAR G G SL+
Sbjct: 389 FEFCNSAQGTLICTDVAARGLDIPAVDYIVQLDPPDDPRDYIHRVGRTARGKGKVGRSLM 448
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL PSEV + L+ R+ + E + ++++++ Q
Sbjct: 449 FLQPSEVGFINHLREARVPVVEFEFP--TKHIINI---------------------QSQL 485
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E + Q L+ SA +GY S++ YAS+S LR +F+ ++ L AKS+ P V
Sbjct: 486 EKLISQNYYLNQSAKEGYRSYLHAYASHS--LRSVFDVNKLDLVKVAKSYGFVTPPRVDI 543
Query: 883 GIGKPKNKEE 892
+G ++++
Sbjct: 544 TLGASMSRDK 553
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 111/182 (60%), Gaps = 7/182 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR----KD 56
M T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ ++ K +
Sbjct: 110 MGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSLKFKPRNGMIFQL 169
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G A+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TP
Sbjct: 170 GTGALIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTP 228
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K Q++L SAT
Sbjct: 229 GRLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKD--DRQTMLFSAT 286
Query: 177 LT 178
T
Sbjct: 287 QT 288
>gi|194911317|ref|XP_001982328.1| GG11103 [Drosophila erecta]
gi|190656966|gb|EDV54198.1| GG11103 [Drosophila erecta]
Length = 683
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 280/513 (54%), Gaps = 62/513 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 208 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 265
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 266 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 324
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 325 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 381
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 382 IEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 431
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 432 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 484
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 485 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 544
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 545 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 581
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 582 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAA 639
Query: 888 KNKEELKN---------KKM---AINKEKSFKQ 908
K + K KKM + +K++ FKQ
Sbjct: 640 KRERPEKRVGGGGFGFYKKMNEGSASKQRHFKQ 672
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 208 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 265
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 266 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 324
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 325 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 380
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 381 RIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 440
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 441 VFFSSCMS 448
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 335 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 391
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 392 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 437
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 438 KVMVFFSSCMSVKYHHELFN 457
>gi|195502468|ref|XP_002098237.1| GE10265 [Drosophila yakuba]
gi|194184338|gb|EDW97949.1| GE10265 [Drosophila yakuba]
Length = 681
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 280/513 (54%), Gaps = 62/513 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 206 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 263
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 264 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 322
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 323 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 379
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 380 IEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 429
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 430 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 482
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 483 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 542
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 543 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 579
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 580 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAA 637
Query: 888 KNKEELKN---------KKM---AINKEKSFKQ 908
K + K KKM + +K++ FKQ
Sbjct: 638 KRERPEKRVGGGGFGFYKKMNEGSASKQRHFKQ 670
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 206 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 263
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 264 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 322
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 323 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 378
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 379 RIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 438
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 439 VFFSSCMS 446
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 333 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 389
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 390 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 435
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 436 KVMVFFSSCMSVKYHHELFN 455
>gi|242798281|ref|XP_002483137.1| ATP-dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218716482|gb|EED15903.1| ATP-dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 591
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 294/545 (53%), Gaps = 60/545 (11%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVL 433
P + AL P + + P F + NL++ M +T +QQ +I P++ G DVL
Sbjct: 96 PSANALSLPQTGDSLP--TKFTELNLSDRTLEAIKEMGFETMTEIQQRAIPPLMAGRDVL 153
Query: 434 VRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSF 493
++TGSGKTLA+ IP I+ L + K ++G +I+ PTRELALQ + +L +
Sbjct: 154 GAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGVLILSPTRELALQIWGVARQLLEKH 211
Query: 494 TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADR 553
+ + GG ++E ++ KG+++LVATPGRLLDH ++T+ F + LV+DEADR
Sbjct: 212 SQ-THGIVMGGANRRAEAEKLEKGVNLLVATPGRLLDHLQNTKGFVFKNLRQLVIDEADR 270
Query: 554 ILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDI 612
IL+ G+E ++ + ++IL + Q+ L SAT T V+ LA ++L+ P+ I+ +
Sbjct: 271 ILEIGFEDEMKQIMKILGNG--ERQTSLFSATQTTKVEDLARISLKPGPLYINVVPR--M 326
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 672
N T D L+Q ++V P R + L SF+ + + K++VF+++ + +Y
Sbjct: 327 ENAT-----VDRLEQGYVVCEPDKRFLLLFSFL-------KRNLKKKIIVFLSSCNSVNY 374
Query: 673 HTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
++ELL+ + ++ +HG Q +RT F F + + G+LICTDVAARGLD+P +D++
Sbjct: 375 YSELLNYI---DLPVLSIHGKQKQQKRTSTFFEFVNSERGILICTDVAARGLDIPEIDYV 431
Query: 733 VQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL 791
VQY P DY+HRVGRTAR +G SL+FL PSE+ + L+ ++ + E +
Sbjct: 432 VQYDPPDDPRDYIHRVGRTARGAKAKGRSLMFLQPSEMGFLTHLKEAKVPVVEFEFPQ-- 489
Query: 792 QNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYS 851
+ +++V Q E + Q L+ SA +GY S++ YAS+S
Sbjct: 490 KKIINV---------------------QSQLEKLISQNYYLNKSAKEGYRSYINAYASHS 528
Query: 852 KDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGN 911
LR +F+ ++ L AKSF P V +G ++++ + A + KQ
Sbjct: 529 --LRSVFDVNKLDLVKIAKSFGFSTPPRVDITLGASMSRDKKVQGRRAYGSQP--KQANR 584
Query: 912 FSKKQ 916
F +K+
Sbjct: 585 FKRKR 589
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P++ G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 130 MGFETMTEIQQRAIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 188 LILSPTRELALQIWGVARQLLEKHSQ-THGIVMGGANRRAEAEKLEKGVNLLVATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F + LV+DEADRIL+ G+E ++ + ++IL + Q+ L SAT T
Sbjct: 247 DHLQNTKGFVFKNLRQLVIDEADRILEIGFEDEMKQIMKILGNG--ERQTSLFSATQT 302
>gi|388580276|gb|EIM20592.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 760
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 211/657 (32%), Positives = 323/657 (49%), Gaps = 98/657 (14%)
Query: 361 ISSLFQNNPDIPNV-----PTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQV 415
+SSLF NP+I + P + + S A A TS E +HP + ++L + ++I
Sbjct: 95 VSSLFTFNPEIEEIKEDKGPKQPQQAPSNAPLASTSSFEGAKLHPLLIQHLRDKLDIKAP 154
Query: 416 TTVQQLSI----QP-----ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR--PKISRK 464
T +Q+L++ QP +L DV ++SQTGSGKTL Y +PIIQ L + I R
Sbjct: 155 TPIQKLALPTLLQPTEKDSVLSSRDVFIQSQTGSGKTLTYLLPIIQDLLPLGELSFIDRS 214
Query: 465 DGIYAVIILPTRELALQTLEIFTKLC--------------KSFT-WIVPSWLTGGEKMKS 509
G A+I+ PTRELA Q ++ L K T W+V LTGG
Sbjct: 215 IGTLAIILAPTRELARQIFDVLENLLHLSLTLKGVPEEDQKRLTRWLVGGLLTGGSTRTH 274
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
EKAR+RKG ILV+TPGRLLDH ++T + SK LVLDEADR++D G+E I ++
Sbjct: 275 EKARLRKGCPILVSTPGRLLDHLQNTTSFNASKCRWLVLDEADRLMDLGFEETITGIIKG 334
Query: 570 LKKQKP---------------------QFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
L+ ++ + ++IL SAT+ +Q A L NPI + +D
Sbjct: 335 LEGRRKLTKKAIDEGSLSEVGGWDFDVRRRNILCSATIREDIQSFASQQLLNPIVLKESD 394
Query: 609 -----STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVF 663
T+ + P L Q ++ P KLRLV+L + + + + ++++VF
Sbjct: 395 IKKDVDTNAAEESTKFTPPAQLSQKYVQVPLKLRLVSLLALLRSLATSKENVQGNRIIVF 454
Query: 664 MATQDMADYHTELLSTV-------------------LGENIAFFKLHGSMSQSERTEVFK 704
+ D D H +L V + N ++LHGSMS R +
Sbjct: 455 FSCTDSVDLHFQLFGGVSMTDAGNRNVDDKLSVTCPVLPNTKIYRLHGSMSLQNRLSTVR 514
Query: 705 TF---RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPS--SSTDYVHRVGRTARVGHEGS 759
F ++ + ++ CT VA+RGLD+PLV ++Q P+ + +YVHRVGRTAR G G
Sbjct: 515 EFTDKKTTEPAIMFCTSVASRGLDMPLVRAVIQVDLPTEGGANEYVHRVGRTARAGKGGE 574
Query: 760 SLLFLIPSEVKLVEELQNR-RIRIEEIKLKD-CLQNLLSVKMEGDLSRLADGNVETAATA 817
+ F+ PSE V+ L ++ + IKL ++N+L G + E+ AT
Sbjct: 575 AWSFVAPSEHGWVDWLTSQLDSDTKSIKLHPVSVENVLKRGYGGQGTEF-----ESRATD 629
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
+Q S E V+ A + Y S +R YA++ + R F+ K +HLGH AK+FALR+
Sbjct: 630 VQTSLERWVIASPDNSQLARQAYLSHIRAYATHPIEERKFFHIKLLHLGHLAKAFALRET 689
Query: 878 PSVIS----GIGKPKNKEELKNKKMAINKE-----KSFKQRGNFSKKQMLSEFDSGL 925
P+ S I + K+ ++ ++ + + + KS K+ G F+ SEF + L
Sbjct: 690 PTTASTTKADIAQSKDNQKHQSIEQKMQESVRRIGKSTKRDGEFANNDT-SEFQTSL 745
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 169/360 (46%), Gaps = 71/360 (19%)
Query: 1 MNITQVTTVQQLSI----QP-----ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR-- 49
++I T +Q+L++ QP +L DV ++SQTGSGKTL Y +PIIQ L +
Sbjct: 149 LDIKAPTPIQKLALPTLLQPTEKDSVLSSRDVFIQSQTGSGKTLTYLLPIIQDLLPLGEL 208
Query: 50 PKISRKDGIYAVIILPTRELALQTLEIFTKLC--------------KSFT-WIVPSWLTG 94
I R G A+I+ PTRELA Q ++ L K T W+V LTG
Sbjct: 209 SFIDRSIGTLAIILAPTRELARQIFDVLENLLHLSLTLKGVPEEDQKRLTRWLVGGLLTG 268
Query: 95 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 154
G EKAR+RKG ILV+TPGRLLDH ++T + SK LVLDEADR++D G+E I
Sbjct: 269 GSTRTHEKARLRKGCPILVSTPGRLLDHLQNTTSFNASKCRWLVLDEADRLMDLGFEETI 328
Query: 155 AEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERD 214
++ L+ ++ K+ +DE G++ D
Sbjct: 329 TGIIKGLEGRR----------------------------KLTKKAIDEGSLSEVGGWDFD 360
Query: 215 IAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAAD-----STDIHNTTD 269
+ + +++L SAT+ +Q A L NPI + +D T+ +
Sbjct: 361 V------------RRRNILCSATIREDIQSFASQQLLNPIVLKESDIKKDVDTNAAEEST 408
Query: 270 SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
P L Q ++ P KLRLV+L + + + + ++++VF + D D H +L
Sbjct: 409 KFTPPAQLSQKYVQVPLKLRLVSLLALLRSLATSKENVQGNRIIVFFSCTDSVDLHFQLF 468
>gi|260948130|ref|XP_002618362.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
gi|238848234|gb|EEQ37698.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
Length = 560
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 269/494 (54%), Gaps = 49/494 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 114 MGFKKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIELLYSL--KFKPRNGTGV 171
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
VII PTRELALQ + +L + T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 172 VIISPTRELALQIFGVARELMEHHTQTF-GIVIGGANRRQEADKLVKGVNLLIATPGRLL 230
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 231 DHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPNEDRQ--SMLFSATQTTK 288
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA M+L+ P+ I+ + + D L+Q ++V R + L SF+
Sbjct: 289 VEDLARMSLRPGPLYINVVPES-------AASTADGLEQGYVVCESDKRFLLLFSFL--- 338
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF+++ + Y ELL+ + ++ LHG Q++RT F F +
Sbjct: 339 ----KRNAKKKIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQAKRTNTFFEFCN 391
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 392 AKQGILICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 451
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E E +++A NV++ T L +
Sbjct: 452 ELGFLRYLKAANVPLNE--------------YEFPANKIA--NVQSQLTKL-------IK 488
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA GY S+++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 489 SNFWLHQSAKDGYRSYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNITIGAS 546
Query: 888 KNKEELKNKKMAIN 901
E K+KK N
Sbjct: 547 GKSVEKKHKKQRRN 560
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 114 MGFKKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIELLYSL--KFKPRNGTGV 171
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VII PTRELALQ + +L + T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 172 VIISPTRELALQIFGVARELMEHHTQTF-GIVIGGANRRQEADKLVKGVNLLIATPGRLL 230
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 231 DHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPNEDR--QSMLFSATQT 286
>gi|322796780|gb|EFZ19207.1| hypothetical protein SINV_02979 [Solenopsis invicta]
Length = 605
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 263/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 111 MGFTNMTEIQAKSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 168
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL++QT + +L K + + L GG ++E ++ KG++I+VATPGRLL
Sbjct: 169 IIMSPTRELSMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLAKGVNIIVATPGRLL 227
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRILD GYE ++ + + IL K++ Q++L SAT T
Sbjct: 228 DHLQNTPDFLYKNLQCLVIDEADRILDIGYEEELKQIINILPKRR---QTMLFSATQTQK 284
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V + + L+ PI + D ++ + L+Q ++ P + R + L +F+
Sbjct: 285 VAMITTLALKKEPIYVGVDDDKEMATV-------EGLQQGYVACPSEKRFLLLFTFL--- 334
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ +H ELL+ + ++ +HG Q++RT F F +
Sbjct: 335 ----KKNRKKKIMVFFSSCMSVKFHHELLNYI---DLPVMSIHGKQKQTKRTTTFYQFCN 387
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+G L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 388 ASTGTLLCTDVAARGLDIPDVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 447
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ R+ + E E +++AD +Q+ E +
Sbjct: 448 ELGFLRYLKQARVPVNE--------------YEFSWNKIAD---------IQLQLEKLIS 484
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + + ++VR Y S+ L+ +F+ + + L AKSF P+V
Sbjct: 485 KNYFLHQSAKEAFKNYVRAYDSHH--LKQVFDIETLDLAKVAKSFGFIVPPAV 535
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 117/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 111 MGFTNMTEIQAKSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 168
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL++QT + +L K + + L GG ++E ++ KG++I+VATPGRLL
Sbjct: 169 IIMSPTRELSMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLAKGVNIIVATPGRLL 227
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD GYE ++ + + IL K++ Q++L SAT T
Sbjct: 228 DHLQNTPDFLYKNLQCLVIDEADRILDIGYEEELKQIINILPKRR---QTMLFSATQT 282
>gi|410968542|ref|XP_003990761.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Felis catus]
Length = 674
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 267/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 201 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 258
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 259 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 315
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH + + + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 316 LLDHMQVRQHFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 372
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 373 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 424
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 425 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGRQKQNKRTTTFFQF 475
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 476 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGQALLILR 535
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S+++D +Q E
Sbjct: 536 PEELGFLRYLRQSKVPLSE--------------FEFSWSKISD---------IQSQLEKL 572
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 573 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 625
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 201 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL--KFMPRNGTGV 258
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 259 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 315
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH + + + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 316 LLDHMQVRQHFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 372
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTL- 250
+ ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T V+ LA ++L
Sbjct: 328 YKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQTRKVEDLARISLK 384
Query: 251 QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ P+ + D D N T D L+Q ++V P + R + L +F+ ++ +
Sbjct: 385 KEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL-------KKNRKK 430
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH ELL+
Sbjct: 431 KLMVFFSSCMSVKYHYELLN 450
>gi|399218102|emb|CCF74989.1| unnamed protein product [Babesia microti strain RI]
Length = 579
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 272/513 (53%), Gaps = 39/513 (7%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
++ +S+ + ++P + NL + +++T +Q L+I ++D + L+ S TGSGKT
Sbjct: 8 SSILTASSFSDITSLNPRLVTNL-QHHGFSKLTKIQSLAIPILVDYKNGLICSPTGSGKT 66
Query: 444 LAYAIPIIQKL-QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
+ IP + L + K SRKDG +II PTREL QT EI +K+ + + WIV +T
Sbjct: 67 FTFLIPAVNHLLNDTATKKSRKDGTRIIIISPTRELTQQTCEIASKVTQLWPWIVVGSIT 126
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GGEK K+EK+ +RKGI++L +TPGR+LDH + T + +K+ LVLDE DR+LD G+E
Sbjct: 127 GGEKKKAEKSSLRKGITLLCSTPGRMLDHLQSTASFVSNKLNCLVLDEVDRLLDMGFESK 186
Query: 563 IAE-FLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTD-SLV 620
+ + +++ +FQ IL+SAT+ V++LA I +S N D
Sbjct: 187 VKSIYAKLVDNADNKFQKILISATINSEVEQLATFC------IGPGESFTPVNIIDKKFQ 240
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
+P +L+ +++ P + + + L + ++ KC+ K +VF++ DY LLS V
Sbjct: 241 VPKTLQHKYVIAPLRYKFLLLIALLI-KCR--------KAVVFVSNCTAVDYFHNLLSVV 291
Query: 681 LGEN--------------IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
N I +K+HG +S +R F ++G+L+ TDVA+RGL+L
Sbjct: 292 TWPNEVLKDKQQQKEILKIKVYKIHGKISPDDRIGFMGDFTRAETGILVATDVASRGLNL 351
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
VD +VQ+ P +YVHR GRTAR+G G ++L L+ SE ++ L + + ++
Sbjct: 352 H-VDLVVQFDPPQQLGEYVHRSGRTARLGSTGIAVLMLLESEQGIIGLLNEKSVYPTQLS 410
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
+++ NL LS+ N + + F V K L A Y V+
Sbjct: 411 IQELYSNLYCTNF---LSKYR--NPKVTISFFLRHFRRLVSNDKELAILANDAYLCSVKA 465
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
Y + LRH+ +FK++HLGH A SF L PS
Sbjct: 466 YRTIVPQLRHVLHFKKLHLGHMAASFNLSHTPS 498
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 116/178 (65%), Gaps = 2/178 (1%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYAV 61
+++T +Q L+I ++D + L+ S TGSGKT + IP + L + K SRKDG +
Sbjct: 35 FSKLTKIQSLAIPILVDYKNGLICSPTGSGKTFTFLIPAVNHLLNDTATKKSRKDGTRII 94
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTREL QT EI +K+ + + WIV +TGGEK K+EK+ +RKGI++L +TPGR+LD
Sbjct: 95 IISPTRELTQQTCEIASKVTQLWPWIVVGSITGGEKKKAEKSSLRKGITLLCSTPGRMLD 154
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE-FLEILKKQKPQFQSILLSATLT 178
H + T + +K+ LVLDE DR+LD G+E + + +++ +FQ IL+SAT+
Sbjct: 155 HLQSTASFVSNKLNCLVLDEVDRLLDMGFESKVKSIYAKLVDNADNKFQKILISATIN 212
>gi|345489122|ref|XP_001604385.2| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Nasonia vitripennis]
Length = 643
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 269/482 (55%), Gaps = 50/482 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +SI P+L+G D++ ++TGSGKTL++ IP ++ + ++ K ++G
Sbjct: 159 MGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKL--KFMPRNGTGC 216
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + + L GG ++E ++ KG++I+VATPGRLL
Sbjct: 217 IIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLSKGVNIVVATPGRLL 275
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ L++DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 276 DHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRR---QTMLFSATQTKK 332
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + ++ P+ + D + + L+Q ++ P + R + L +F+
Sbjct: 333 TEALTTLAVKKEPVYVGVDDEKEKATV-------EGLEQGYVACPSEKRFLLLFTFL--- 382
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 383 ----KKNRQKKVMVFFSSCMSVKYHHELLNYI---DLPVMSIHGKQKQTKRTTTFFQFCN 435
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 436 AQSGILLCTDVAARGLDIPDVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 495
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ R+ + E E +++AD +Q+ E +
Sbjct: 496 ELGFLRYLKQARVPVNEF--------------EFSWNKIAD---------IQLQMEKLIS 532
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + ++VR Y S+ L+ IF+ + + L AKSF P+V +G
Sbjct: 533 KNYFLNMSAKEAFKAYVRAYDSHH--LKQIFDVETLDLTKVAKSFGFTVPPAVDLKVGVS 590
Query: 888 KN 889
K+
Sbjct: 591 KD 592
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 145/248 (58%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +SI P+L+G D++ ++TGSGKTL++ IP ++ + ++ K ++G
Sbjct: 159 MGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYKL--KFMPRNGTGC 216
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + + L GG ++E ++ KG++I+VATPGRLL
Sbjct: 217 IIISPTRELSMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLSKGVNIVVATPGRLL 275
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ L++DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 276 DHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRR---QTMLFSATQTKK 332
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
T T +K V V DE ++ L+QGY E+ LKK + +
Sbjct: 333 T-EALTTLAVKKEPVYVGVDDEKEKATVEGLEQGYVACPSEKRFLLLFTFLKKNRQKKVM 391
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 392 VFFSSCMS 399
>gi|383857595|ref|XP_003704290.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Megachile rotundata]
Length = 621
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 281/526 (53%), Gaps = 64/526 (12%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 142 EDMGFKNMTEIQAKSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGT 199
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTREL++QT + +L K + L GG ++E ++ KGI+I+VATPGR
Sbjct: 200 GCIIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGASRQTEAQKLSKGINIVVATPGR 258
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 259 LLDHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIIHILPKKR---QTMLFSATQT 315
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
+ L + L+ PI + D H+ ++ + L+Q ++V P + R + L +F+
Sbjct: 316 KKTETLTALALKKEPIYVGVDD----HHEKATV---EGLEQGYVVCPSEKRFLLLFTFL- 367
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 368 ------KKNRKKKVMVFFSSCMSVKYHHELLNYI---DLPVLSIHGKQKQTKRTTTFFQF 418
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L
Sbjct: 419 CNASSGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 478
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ R+ + E +++AD +Q+ E
Sbjct: 479 PEELGFLRYLKQARVPVNEFDFS--------------WNKIAD---------IQLQLEKL 515
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---IS 882
+ + L+ SA + + ++VR Y S+ L+ IF+ + + L AKSF P+V IS
Sbjct: 516 ISKNYFLNVSAKEAFKAYVRAYDSHH--LKQIFDIETLDLVKVAKSFGFLVPPAVDLRIS 573
Query: 883 GIGKPKNK-----------EELKNKKMAINKEKSFKQRGNFSKKQM 917
+P+ + N I + K+F+Q +Q
Sbjct: 574 KNSRPRKRIGGGGYGYLKSSNNPNSGKQIQRSKTFRQVNRHDDRQF 619
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 120/190 (63%), Gaps = 12/190 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 144 MGFKNMTEIQAKSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGC 201
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + L GG ++E ++ KGI+I+VATPGRLL
Sbjct: 202 IIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGASRQTEAQKLSKGINIVVATPGRLL 260
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRILD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 261 DHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIIHILPKKR---QTMLFSATQT-- 315
Query: 181 TCWCKHTETL 190
K TETL
Sbjct: 316 ----KKTETL 321
>gi|320582556|gb|EFW96773.1| ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 568
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 279/505 (55%), Gaps = 54/505 (10%)
Query: 393 EEFPGIH---PFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
E+F +H P MK + M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP
Sbjct: 112 EDFADLHLSEPTMKGI--QDMGFTKMTEVQARTIPPLLAGKDVLGAAKTGSGKTLAFLIP 169
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I+ L + K ++G A++I PTRELALQ + +L + + L GG +
Sbjct: 170 AIELLYSL--KFKPRNGAGAIVITPTRELALQIFGVARELMAHHSQTL-GILIGGANRRQ 226
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
E ++ KG+++++ATPGRLLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++I
Sbjct: 227 EAEKLAKGVNLIIATPGRLLDHLQNTKGFIFKNLKTLIIDEADRILEIGFEDEMKQIVKI 286
Query: 570 LKKQKPQFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L +K Q S+L SAT T V+ LA ++L P+ I+ +H ++ D L+Q
Sbjct: 287 LPNEKRQ--SMLFSATQTTKVEDLARVSLNKAPLYIN------VHQDRET-STADGLEQG 337
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
++V R + L SF+ + + K++VF+++ + Y++ELL+ + ++
Sbjct: 338 YVVCDSDKRFLLLFSFL-------KRNLKKKVIVFLSSCNCVKYYSELLNYI---DLPVL 387
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
LHG Q +RT F F + K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRV
Sbjct: 388 DLHGKQKQQKRTNTFFEFCNAKQGILICTDVAARGLDIPEVDWIIQFDPPDDPRDYIHRV 447
Query: 749 GRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
GRTAR +G SL+FL PSE+ + L+ ++ + E E +++A
Sbjct: 448 GRTARGSKGKGKSLMFLTPSELGFLRYLKAAKVPLNE--------------YEFPANKIA 493
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
+ +Q E V LH SA GY ++++ YAS+ L+ ++ ++ L
Sbjct: 494 N---------VQSQLEQLVKNNYWLHQSAKDGYRAYLQAYASHH--LKTVYQVDKLDLVK 542
Query: 868 FAKSFALRDAPSVISGIGKPKNKEE 892
KSF P V IG +K++
Sbjct: 543 VGKSFGFPVPPKVNITIGSSLSKKK 567
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G A
Sbjct: 130 MGFTKMTEVQARTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGAGA 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + + L GG + E ++ KG+++++ATPGRLL
Sbjct: 188 IVITPTRELALQIFGVARELMAHHSQTL-GILIGGANRRQEAEKLAKGVNLIIATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL +K QS+L SAT T
Sbjct: 247 DHLQNTKGFIFKNLKTLIIDEADRILEIGFEDEMKQIVKILPNEKR--QSMLFSATQT 302
>gi|119192364|ref|XP_001246788.1| probable ATP-dependent RNA helicase [Coccidioides immitis RS]
gi|118572554|sp|Q1EA54.1|HAS1_COCIM RecName: Full=ATP-dependent RNA helicase HAS1
Length = 604
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 266/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 142 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 199
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 200 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 258
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 259 DHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQTTK 316
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 317 VEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL--- 366
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 367 ----KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 419
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 420 AKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPS 479
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L++ R+ + E + + +++V Q E +
Sbjct: 480 EVGFLKHLKDARVPVVEFEFP--AKKIVNV---------------------QSQLEKLIG 516
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
Q L+ SA GY S+++ YAS+S LR +F+ ++ L AK F P V +G
Sbjct: 517 QNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVNKLDLVKVAKGFGFPTPPRVDISLG 572
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 142 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 199
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 200 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 258
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 259 DHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 314
>gi|449296334|gb|EMC92354.1| hypothetical protein BAUCODRAFT_38404 [Baudoinia compniacensis UAMH
10762]
Length = 745
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 263/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L + K ++G
Sbjct: 287 MPFDTMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLYSL--KFKPRNGTGV 344
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 345 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 403
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F V LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 404 DHLQNTQGFVFKNVRALVIDEADRILEVGFEDEMRQIIKILPKE--DRQTMLFSATQTTK 461
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H ++ L+Q +++ +R L +F+
Sbjct: 462 VEDLARISLRPGPLYIN----VDHHQEHSTVA---GLEQGYVICEADMRFRLLFTFL--- 511
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ + Y++ELL+ + ++ LHG Q +RT F F +
Sbjct: 512 ----KRHPKKKIIVFFSSCNCVKYYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 564
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL P+
Sbjct: 565 ATHGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGATGKGKSLMFLQPN 624
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ R+ + E ++ ++ D +Q E+ +
Sbjct: 625 EVGFLGHLKEARVPLVEFEIPP--------------KKIVD---------IQSQLEALIG 661
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ L+ SA GY S+++ YAS+S LR +FN Q+ L AKSF P V +G
Sbjct: 662 KNYYLNRSAKDGYRSYLQAYASHS--LRSVFNVNQLDLKKVAKSFGFPTPPRVDINLG 717
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L + K ++G
Sbjct: 287 MPFDTMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLYSL--KFKPRNGTGV 344
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 345 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 403
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F V LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 404 DHLQNTQGFVFKNVRALVIDEADRILEVGFEDEMRQIIKILPKE--DRQTMLFSATQT 459
>gi|392863973|gb|EAS35240.2| ATP-dependent RNA helicase HAS1 [Coccidioides immitis RS]
Length = 672
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 266/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 210 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 267
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 268 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 326
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 327 DHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQTTK 384
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 385 VEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL--- 434
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 435 ----KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 487
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 488 AKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPS 547
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L++ R+ + E + + +++V Q E +
Sbjct: 548 EVGFLKHLKDARVPVVEFEFP--AKKIVNV---------------------QSQLEKLIG 584
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
Q L+ SA GY S+++ YAS+S LR +F+ ++ L AK F P V +G
Sbjct: 585 QNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVNKLDLVKVAKGFGFPTPPRVDISLG 640
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 210 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 267
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 268 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 326
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 327 DHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 382
>gi|167540072|ref|XP_001741531.1| ATP-dependent RNA helicase has1 [Entamoeba dispar SAW760]
gi|165893947|gb|EDR22062.1| ATP-dependent RNA helicase has1, putative [Entamoeba dispar SAW760]
Length = 518
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/491 (34%), Positives = 273/491 (55%), Gaps = 49/491 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G
Sbjct: 73 EEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGT 130
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+QT E+ K+ + + + + GG K E+ ++KG SI+VATPGR
Sbjct: 131 GAIIISPTRELAIQTFEVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGR 189
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT +
Sbjct: 190 LLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQS 246
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V +A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 247 EKVDDIANISLKQPVVINVESQSTISTSS-------KLEQGYVLVEAKDRFRLLYTFL-- 297
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+++ K +VFM++ ++++LL+ + +I LHG + Q +RT+VF F
Sbjct: 298 -----RKNKNKKTIVFMSSCKAVKFYSDLLNYI---DIPVKALHGQLDQDKRTKVFFEFC 349
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
K +LI TD+AARGLD+P VDWI+Q P S DY+HRVGRTAR +G +LLF+ P
Sbjct: 350 KAKEAILITTDIAARGLDIPAVDWIIQVDLPDSPKDYIHRVGRTARADTKGRALLFVQPC 409
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV+++E L+ +I + + ++ E +Q E V
Sbjct: 410 EVRILEYLKGEKIPLTQYEVP-----------------------EKKIANIQRELEKLVE 446
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK- 886
+ L+T A GY +++ Y S S L+ +FN I +G A SF L + P V I K
Sbjct: 447 KNYYLNTEAKDGYKAYIMAYNSRS--LKDVFNVNDIDIGGIALSFGLTNPPKVQLNILKA 504
Query: 887 PKNKEELKNKK 897
PK+ + K+
Sbjct: 505 PKSSNRFEKKR 515
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 115/173 (66%), Gaps = 6/173 (3%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G A+II
Sbjct: 78 TKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGTGAIII 135
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+QT E+ K+ + + + + GG K E+ ++KG SI+VATPGRLLDH
Sbjct: 136 SPTRELAIQTFEVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLDHI 194
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT
Sbjct: 195 INTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSAT 244
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT + V +
Sbjct: 196 NTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQSEKVDDI 252
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 253 ANISLKQPVVINVESQSTISTSS-------KLEQGYVLVEAKDRFRLLYTFL-------R 298
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
+++ K +VFM++ ++++LL+
Sbjct: 299 KNKNKKTIVFMSSCKAVKFYSDLLN 323
>gi|320168710|gb|EFW45609.1| myc-regulated DEAD box protein [Capsaspora owczarzaki ATCC 30864]
Length = 707
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 263/473 (55%), Gaps = 48/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q+ I P++ G D+L ++TGSGKTLA+ IP I+ + ++ ++G
Sbjct: 229 MKFTHMTEIQRRCIPPLVAGKDLLAAAKTGSGKTLAFLIPAIELMSQL--NFMPRNGTGV 286
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL+LQT + L + + GG K E ++ KGI+IL+ATPGRLL
Sbjct: 287 IIISPTRELSLQTYGVCRDLLRHHNHTF-GLVMGGANRKQEAEKLCKGINILIATPGRLL 345
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F +E L++DEADRIL+ G+E ++ + + +L K Q +++L SAT T
Sbjct: 346 DHLQNTKGFNFKHLEMLIIDEADRILEIGFEEEMKQIIRLLPKDS-QRRTVLFSATQTRN 404
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I D + + L+Q ++V R + L +F+
Sbjct: 405 VEDLARISLKKEPLYIGVDDEKIV-------ATAEGLEQGYVVCKAGQRFLLLFTFL--- 454
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+++ K++VF ++ + +H+ELL+ + ++ ++HG Q +RT F F +
Sbjct: 455 ----KKNQNKKVMVFFSSCNSVKFHSELLNYI---DLPVLEIHGRQKQQKRTNTFFEFCN 507
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K+G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR V G +LLFL+P
Sbjct: 508 AKTGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGVNGSGHALLFLLPE 567
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +S++ + +Q E +
Sbjct: 568 ELAFLRYLKQAKVPLNE--------------YEFPVSKIHN---------VQSQLEKLIE 604
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA GY S+++ YAS++ R IF+ ++ L ++F PSV
Sbjct: 605 KNYYLHRSARDGYRSYLQAYASHAH--RSIFDVTKLDLQQVGQAFGFTAPPSV 655
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q+ I P++ G D+L ++TGSGKTLA+ IP I+ + ++ ++G
Sbjct: 229 MKFTHMTEIQRRCIPPLVAGKDLLAAAKTGSGKTLAFLIPAIELMSQL--NFMPRNGTGV 286
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+LQT + L + + GG K E ++ KGI+IL+ATPGRLL
Sbjct: 287 IIISPTRELSLQTYGVCRDLLRHHNHTF-GLVMGGANRKQEAEKLCKGINILIATPGRLL 345
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F +E L++DEADRIL+ G+E ++ + + +L K Q +++L SAT T
Sbjct: 346 DHLQNTKGFNFKHLEMLIIDEADRILEIGFEEEMKQIIRLLPKDS-QRRTVLFSATQT 402
>gi|396496328|ref|XP_003844718.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
gi|312221299|emb|CBY01239.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
Length = 613
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 275/492 (55%), Gaps = 62/492 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L MR K ++G
Sbjct: 152 MGFETMTEIQQKTIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSAMRFK--PRNGTGV 209
Query: 470 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+++ PTRELALQ E+ K ++F ++ GG ++E ++ KG+++L+ATP
Sbjct: 210 IVVSPTRELALQIFGVARELMEKHSQTFGIVI-----GGANRRAEAEKLVKGVNLLIATP 264
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH +T+ F ++ L++DEADRIL+ G+E ++ ++IL + Q++L SAT
Sbjct: 265 GRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSVIKILPSDR---QTMLFSAT 321
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V+ LA ++L+ P+ I+ D H+T + L +Q +++ R L SF
Sbjct: 322 QTTKVEDLARISLKPGPLYINV-DYRKEHSTVEGL------EQGYVICDSDTRFRLLFSF 374
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ + ++ K++VF ++ + ++ ELL+ + ++ +LHG + Q RT F
Sbjct: 375 L-------KKHQKKKVIVFFSSCNSVKFYAELLNYI---DLPVLELHGKLKQQVRTNRFF 424
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLF 763
F + SG LICTDVAARGLD+P VDW++Q+ P DY+HRVGRTAR +G SL+F
Sbjct: 425 EFCNATSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTARGSDGKGRSLMF 484
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+PSE+ ++ L+ R+ + E +L +L++ Q E
Sbjct: 485 LLPSEIGFLKLLKEARVPLVEFELP--ANKILNI---------------------QSQLE 521
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP----S 879
+ + + L+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P S
Sbjct: 522 ALISKNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVHKLDLVKVAKSFGFSTPPRIDIS 579
Query: 880 VISGIGKPKNKE 891
+ + +G+ K E
Sbjct: 580 LGASLGRDKKAE 591
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 114/182 (62%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L MR K ++G
Sbjct: 152 MGFETMTEIQQKTIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSAMRFK--PRNGTGV 209
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+++ PTRELALQ E+ K ++F ++ GG ++E ++ KG+++L+ATP
Sbjct: 210 IVVSPTRELALQIFGVARELMEKHSQTFGIVI-----GGANRRAEAEKLVKGVNLLIATP 264
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH +T+ F ++ L++DEADRIL+ G+E ++ ++IL + Q++L SAT
Sbjct: 265 GRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSVIKILPSDR---QTMLFSAT 321
Query: 177 LT 178
T
Sbjct: 322 QT 323
>gi|321455095|gb|EFX66239.1| hypothetical protein DAPPUDRAFT_219114 [Daphnia pulex]
Length = 599
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 264/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M ++T +Q SI +L+G D+L +++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 123 EEMGFKKMTEIQAKSIPHLLEGRDLLGQAKTGSGKTLAFLIPAIELIYKL--KFMPRNGT 180
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTREL++QT + +L + + + GG ++E A++ KG++ILVATPGR
Sbjct: 181 GVIIISPTRELSMQTFGVLRELLRHHSHTY-GLVMGGANRQAEAAKLVKGVNILVATPGR 239
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH T F ++ L++DEADR+LD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 240 LLDHLNSTTDFLFKNLQCLIIDEADRVLDIGFEEELKQLIRILPKKR---QTMLFSATST 296
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
++ LA + L+ PI + D + + L+Q ++V P + R + L SF+
Sbjct: 297 QKIEDLARLALKKEPIIVGVEDVVEKATV-------EGLEQGYVVCPAEKRFLMLFSFL- 348
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ + K++VF ++ +H ELL+ + ++ +HG Q++RT F F
Sbjct: 349 ------KRNRKKKIMVFFSSCLSVKFHHELLNYI---DMPVMCIHGKQKQTKRTTTFFQF 399
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G +LL L
Sbjct: 400 CNADSGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGQGGKGHALLLLR 459
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S++AD +Q E
Sbjct: 460 PEELGFLRYLKQAKVPLNE--------------FEFSWSKIAD---------IQPQLEKL 496
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
V + LH SA + Y +++R Y S+ L+ IF+ + L A+SF + P+V
Sbjct: 497 VSKNYFLHMSAKEAYKAYIRAYDSHH--LKTIFDVHTLDLARVAQSFGFKVPPTV 549
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI +L+G D+L +++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 125 MGFKKMTEIQAKSIPHLLEGRDLLGQAKTGSGKTLAFLIPAIELIYKL--KFMPRNGTGV 182
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + + + GG ++E A++ KG++ILVATPGRLL
Sbjct: 183 IIISPTRELSMQTFGVLRELLRHHSHTY-GLVMGGANRQAEAAKLVKGVNILVATPGRLL 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH T F ++ L++DEADR+LD G+E ++ + + IL K++ Q++L SAT T
Sbjct: 242 DHLNSTTDFLFKNLQCLIIDEADRVLDIGFEEELKQLIRILPKKR---QTMLFSATST 296
>gi|194743072|ref|XP_001954024.1| GF18065 [Drosophila ananassae]
gi|190627061|gb|EDV42585.1| GF18065 [Drosophila ananassae]
Length = 678
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 281/519 (54%), Gaps = 54/519 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 203 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 260
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 261 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 319
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 320 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAK 376
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L+ + L+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 377 IDALSKLALKAEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 426
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 427 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 479
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 480 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 539
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 540 ELGFLRYLKAAKVPLNE--------------FEFSWQKIAD---------IQLQLEKLIA 576
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 577 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAA 634
Query: 888 KNKEELKNKKMAINKEKSFKQ--RGNFSKKQMLSEFDSG 924
K E K++ +K+ G+ SK++ + + G
Sbjct: 635 --KRERPEKRVGGGGFGYYKKMNEGSDSKQRHFKQVNRG 671
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 203 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 260
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 261 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 319
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 320 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 375
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 376 KIDALSKLALKAEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 435
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 436 VFFSSCMS 443
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T + L+ + L+
Sbjct: 330 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAKIDALSKLALK 386
Query: 252 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 387 AEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 432
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 433 KVMVFFSSCMSVKYHHELFN 452
>gi|62857681|ref|NP_001016776.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Xenopus (Silurana)
tropicalis]
gi|89270404|emb|CAJ82546.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Xenopus (Silurana)
tropicalis]
Length = 640
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 266/473 (56%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 165 MGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELVYKL--KFMPRNGTGV 222
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ G++I+VATPGRLL
Sbjct: 223 LILSPTRELAMQTYGVLKELMAHHVHTF-GLIMGGSNRSAEAQKLANGVNIVVATPGRLL 281
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRIL+ G+E+++ + + +L K++ Q++L SAT T
Sbjct: 282 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRR---QTMLFSATQTRK 338
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D H T ++ D L+Q ++V P + R + L +F+
Sbjct: 339 VEDLARISLKKEPLYV----GVDDHKETATV---DGLEQGYVVCPSEKRFLLLFTFL--- 388
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + KM+VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 389 ----KKNRKKKMMVFFSSCMSVKYHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQFCN 441
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 442 AESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGIDGRGHALLILRPE 501
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 502 ELGFLRYLKQAKVPLSEF--------------EFSWSKISD---------IQTQLEKLIE 538
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y +++R Y S+S + IF+ ++L A SF + P V
Sbjct: 539 KNYYLHKSAQEAYKAYIRAYDSHSH--KQIFDVNTLNLPKVAISFGFQVPPFV 589
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 160/330 (48%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 165 MGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELVYKL--KFMPRNGTGV 222
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ G++I+VATPGRLL
Sbjct: 223 LILSPTRELAMQTYGVLKELMAHHVHTF-GLIMGGSNRSAEAQKLANGVNIVVATPGRLL 281
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRIL+ G+E+++ + + +L K++ Q++L SAT T
Sbjct: 282 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRR---QTMLFSATQT-- 336
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 337 --------------------------------RKVEDLARISLKKEPLYVGV-------- 356
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D H T ++ D L+Q ++V P + R + L +F+
Sbjct: 357 ----------------------DDHKETATV---DGLEQGYVVCPSEKRFLLLFTFL--- 388
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + KM+VF ++ YH ELL+
Sbjct: 389 ----KKNRKKKMMVFFSSCMSVKYHYELLN 414
>gi|171847235|gb|AAI61473.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Xenopus (Silurana)
tropicalis]
Length = 640
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 266/473 (56%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 165 MGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELVYKL--KFMPRNGTGV 222
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ G++I+VATPGRLL
Sbjct: 223 LILSPTRELAMQTYGVLKELMAHHVHTF-GLIMGGSNRSAEAQKLANGVNIVVATPGRLL 281
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRIL+ G+E+++ + + +L K++ Q++L SAT T
Sbjct: 282 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRR---QTMLFSATQTRK 338
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D H T ++ D L+Q ++V P + R + L +F+
Sbjct: 339 VEDLARISLKKEPLYV----GVDDHKETATV---DGLEQGYVVCPSEKRFLLLFTFL--- 388
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + KM+VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 389 ----KKNRKKKMMVFFSSCMSVKYHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQFCN 441
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 442 AESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGIDGRGHALLILRPE 501
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 502 ELGFLRYLKQAKVPLSEF--------------EFSWSKISD---------IQTQLEKLIE 538
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y +++R Y S+S + IF+ ++L A SF + P V
Sbjct: 539 KNYYLHKSAQEAYKAYIRAYDSHSH--KQIFDVNTLNLPKVAISFGFQVPPFV 589
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 160/330 (48%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 165 MGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELVYKL--KFMPRNGTGV 222
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ G++I+VATPGRLL
Sbjct: 223 LILSPTRELAMQTYGVLKELMAHHVHTF-GLIMGGSNRSAEAQKLANGVNIVVATPGRLL 281
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRIL+ G+E+++ + + +L K++ Q++L SAT T
Sbjct: 282 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRR---QTMLFSATQT-- 336
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 337 --------------------------------RKVEDLARISLKKEPLYVGV-------- 356
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D H T ++ D L+Q ++V P + R + L +F+
Sbjct: 357 ----------------------DDHKETATV---DGLEQGYVVCPSEKRFLLLFTFL--- 388
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + KM+VF ++ YH ELL+
Sbjct: 389 ----KKNRKKKMMVFFSSCMSVKYHYELLN 414
>gi|327348721|gb|EGE77578.1| ATP-dependent RNA helicase HAS1 [Ajellomyces dermatitidis ATCC
18188]
Length = 639
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/473 (35%), Positives = 260/473 (54%), Gaps = 49/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 178 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 235
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 236 IVISPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLVKGVNLLIATPGRLL 294
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH + T F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 295 DHLRDTPGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQTTK 352
Query: 590 VQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L Q P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 353 VEDLARISLRQGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL--- 402
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 403 ----KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 455
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 456 ATQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPS 515
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L+ R+ + E + +++V Q E +
Sbjct: 516 EVGFLKHLKEARVPVVEFDFP--AKKIVNV---------------------QSQLEKLIG 552
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 553 QNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVHKLDLVKVAKSFGFPTPPRV 603
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 178 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 235
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 236 IVISPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLVKGVNLLIATPGRLL 294
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 295 DHLRDTPGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 350
>gi|297794203|ref|XP_002864986.1| hypothetical protein ARALYDRAFT_496826 [Arabidopsis lyrata subsp.
lyrata]
gi|297310821|gb|EFH41245.1| hypothetical protein ARALYDRAFT_496826 [Arabidopsis lyrata subsp.
lyrata]
Length = 591
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 271/494 (54%), Gaps = 58/494 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T +Q +I P++ G DVL ++TGSGKTLA+ IP + L +R + ++G
Sbjct: 131 MGFARMTQIQAKAIPPLMMGKDVLGAARTGSGKTLAFLIPAAELLYHVR--FTPRNGTGV 188
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+Q+ + +L K + V + GGE K E + KG+++LVATPGRLL
Sbjct: 189 IVICPTRELAIQSYGVAKELLKYHSQTV-GKVIGGENRKKEAEILAKGVNLLVATPGRLL 247
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ V+DEADRIL+Q +E D+ + +++L K + Q+ L SAT +
Sbjct: 248 DHLENTNGFVFKNLKLFVMDEADRILEQNFEEDLKKIIKLLPKTR---QTSLFSATQSAK 304
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL--- 646
V+ LA ++L +P+ ID + V + L+Q + V P +RL+ L +F+
Sbjct: 305 VEDLARVSLASPVYIDVDEGR-------QKVTNEGLEQGYCVVPSGMRLLFLLTFLKRFH 357
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
GK K++VF +T +H EL + + ++ G + QS+RT F
Sbjct: 358 GK---------KKIMVFFSTCKSTKFHAELFRYI---KLDCLEIRGGIDQSKRTSTLFQF 405
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ ++G+L+CT+VAARGLD P VDWIVQY P + T+Y+HRVGRTAR G +G +LL L
Sbjct: 406 KKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTEYIHRVGRTARGEGAKGKALLVLT 465
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF-ES 824
P E++ ++ L+ +I +EE + ++ LL VK SF E
Sbjct: 466 PDELQFIQYLKAAKIPVEEHEFEEG--KLLDVK----------------------SFLED 501
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI--S 882
+ + L SA + Y +++ Y S+S ++ +FN ++ L A SF D P V +
Sbjct: 502 LISKNYALKESAKEAYKTYISGYDSHS--MKDVFNVHRLDLKEVAASFGFSDPPKVALKT 559
Query: 883 GIGKPKNKEELKNK 896
G K+K E NK
Sbjct: 560 DRGGYKSKREPVNK 573
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 111/176 (63%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I P++ G DVL ++TGSGKTLA+ IP + L +R + ++G
Sbjct: 131 MGFARMTQIQAKAIPPLMMGKDVLGAARTGSGKTLAFLIPAAELLYHVR--FTPRNGTGV 188
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+Q+ + +L K + V + GGE K E + KG+++LVATPGRLL
Sbjct: 189 IVICPTRELAIQSYGVAKELLKYHSQTV-GKVIGGENRKKEAEILAKGVNLLVATPGRLL 247
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T F ++ V+DEADRIL+Q +E D+ + +++L K + Q+ L SAT
Sbjct: 248 DHLENTNGFVFKNLKLFVMDEADRILEQNFEEDLKKIIKLLPKTR---QTSLFSAT 300
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LL AT ++T F ++ V+DEADRIL+Q +E D+ + +++L K + Q+
Sbjct: 238 LLVATPGRLLDHLENTNGFVFKNLKLFVMDEADRILEQNFEEDLKKIIKLLPKTR---QT 294
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
L SAT + V+ LA ++L +P+ ID + V + L+Q + V P +RL+
Sbjct: 295 SLFSATQSAKVEDLARVSLASPVYIDVDEGR-------QKVTNEGLEQGYCVVPSGMRLL 347
Query: 292 ALASFI---LGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
L +F+ GK K++VF +T +H EL
Sbjct: 348 FLLTFLKRFHGK---------KKIMVFFSTCKSTKFHAELF 379
>gi|356513888|ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 572
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 276/514 (53%), Gaps = 53/514 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + K + ++G
Sbjct: 105 MGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPALELLYNV--KFTPRNGAGV 162
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT + +L K + + + GG K E R+ KGI++LV TPGRLL
Sbjct: 163 IVICPTRELAIQTHAVAKELLKYHSQTL-GLVIGGSARKIEAERLAKGINLLVGTPGRLL 221
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + ++ L++DEADRIL+ +E ++ + ++IL K + Q+ L SAT T
Sbjct: 222 DHLQNTKGFMYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNR---QTALFSATQTKK 278
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++ Q PI ID D + V + L Q ++V P R + L SF+
Sbjct: 279 VEDLARLSFQTTPIYIDVDDGR-------TKVTNEGLLQGYVVVPCAKRFIVLYSFL--- 328
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ + +H ++L+ + + +HG Q RT F F
Sbjct: 329 ----KRHQSKKVMVFFSSCNSVKFHADILNLI---QLNCSSIHGKQKQQTRTTTFFDFCK 381
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 382 AEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPE 441
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E D ++A+ +Q E+ V+
Sbjct: 442 ELQFLCYLKAAKVPVKEYAY--------------DEKKVAN---------VQSHLENLVV 478
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ A + Y S++ Y S+S ++ IFN ++ L A SF+ + P+V I
Sbjct: 479 NNFYLNKMAKEAYRSYILAYNSHS--MKDIFNVHRLDLQAVASSFSFSNPPNVSLNINSS 536
Query: 888 KNKEELK---NKKMAINKEKSFKQRGNFSKKQML 918
K + +++ + N + ++ K+Q +
Sbjct: 537 KQRNKMRKVDGSRHGFNDNNPYGKKNADDKRQFV 570
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + K + ++G
Sbjct: 105 MGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPALELLYNV--KFTPRNGAGV 162
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L K + + + GG K E R+ KGI++LV TPGRLL
Sbjct: 163 IVICPTRELAIQTHAVAKELLKYHSQTL-GLVIGGSARKIEAERLAKGINLLVGTPGRLL 221
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEADRIL+ +E ++ + ++IL K + Q+ L SAT T
Sbjct: 222 DHLQNTKGFMYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNR---QTALFSATQT 276
>gi|147902341|ref|NP_001084744.1| uncharacterized protein LOC414715 [Xenopus laevis]
gi|46329511|gb|AAH68907.1| MGC83105 protein [Xenopus laevis]
Length = 638
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 266/473 (56%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 163 MGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELIYKL--KFMPRNGTGV 220
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E ++ G++I+VATPGRLL
Sbjct: 221 LILSPTRELAMQTYGVLKELMAHHVHTF-GLIMGGSNRSAEAQKLANGVNIVVATPGRLL 279
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ LV+DEADRIL+ G+E+++ + + +L K++ Q++L SAT T
Sbjct: 280 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRR---QTMLFSATQTRK 336
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++++ P+ + D H T ++ D L+Q ++V P + R + L +F+
Sbjct: 337 VEDLARISMKKEPLYV----GVDDHKETATV---DGLEQGYVVCPSEKRFLLLFTFL--- 386
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + KM+VF ++ YH ELL+ + ++ +HG Q++RT F F +
Sbjct: 387 ----KKNRKKKMMVFFSSCMSVKYHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQFCN 439
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P
Sbjct: 440 AESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGIDGRGHALLILRPE 499
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 500 ELGFLRYLKQAKVPLSEF--------------EFSWSKISD---------IQTQVEKLIE 536
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y +++R Y S+S + IF+ ++L A SF + P V
Sbjct: 537 KNYYLHKSAQEAYKAYIRAYDSHSH--KQIFDVNTLNLPKVALSFGFQVPPFV 587
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 160/330 (48%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 163 MGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELIYKL--KFMPRNGTGV 220
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ G++I+VATPGRLL
Sbjct: 221 LILSPTRELAMQTYGVLKELMAHHVHTF-GLIMGGSNRSAEAQKLANGVNIVVATPGRLL 279
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ LV+DEADRIL+ G+E+++ + + +L K++ Q++L SAT T
Sbjct: 280 DHMQNTPGFMYKNLQCLVIDEADRILEVGFEQEMKQIINLLPKRR---QTMLFSATQT-- 334
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R + + I K++P + V
Sbjct: 335 --------------------------------RKVEDLARISMKKEPLYVGV-------- 354
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
D H T ++ D L+Q ++V P + R + L +F+
Sbjct: 355 ----------------------DDHKETATV---DGLEQGYVVCPSEKRFLLLFTFL--- 386
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ + KM+VF ++ YH ELL+
Sbjct: 387 ----KKNRKKKMMVFFSSCMSVKYHYELLN 412
>gi|440639047|gb|ELR08966.1| hypothetical protein GMDG_00584 [Geomyces destructans 20631-21]
Length = 527
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 280/512 (54%), Gaps = 54/512 (10%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
PT++ + + P + E M T +T +QQ SI PIL G DVL ++TGSGKTLA+ +
Sbjct: 56 PTTFAQL-NLSPKTAAAIAE-MGFTTLTPIQQKSIPPILAGRDVLGAAKTGSGKTLAFLL 113
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
P I+ +Q++R K ++G +++ PTRELALQ + ++ + + + GG
Sbjct: 114 PAIEMMQDLRFK--PRNGTGVIVVSPTRELALQMFGVAREIMGTHSQTC-GIVMGGANRS 170
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
+E ++ GI++L+ATPGRLLDH ++T+ + + LV+DEADRILD G+E ++ ++
Sbjct: 171 AEATKLATGINLLIATPGRLLDHLQNTKGFVYKNLRMLVIDEADRILDAGFEDEMRAIVK 230
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
IL + + Q+ L SAT T V+ LA ++L+ P+ ++ + T H+T + L +Q
Sbjct: 231 ILPESR---QTALFSATQTTKVEDLARVSLRPGPLYVNVEEETK-HSTVEGL------EQ 280
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
+IV P +LR +L + ++ K++VF+++ + Y+ ELL+ + ++
Sbjct: 281 GYIVCPSELRFR-----LLFTVLKKHLAKKKKIIVFVSSCNCVKYYEELLNYI---DLPV 332
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
LHG Q +RT F +F + GVLICTDVAARGLD+P VDWI+Q+ AP +Y+HR
Sbjct: 333 LALHGQQKQQKRTANFFSFVNATEGVLICTDVAARGLDIPAVDWIIQFDAPDEPRNYIHR 392
Query: 748 VGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
VGRTAR +G S L L PSEV ++ L R+ + E L +
Sbjct: 393 VGRTARGTNGKGKSFLVLHPSEVGFIQYLTTARVPLVEYNLPKLIN-------------- 438
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
+Q E + L+ +A +G+ S++ YA++S LR +F+ +++ L
Sbjct: 439 -----------IQAQLEKLISSNYYLNRTAKEGFRSYLAAYAAHS--LRTVFDVQKLDLA 485
Query: 867 HFAKSFALRDAPSV--ISGIGKPKNKEELKNK 896
A+SF P V + G K+K LK +
Sbjct: 486 AVARSFGFTTPPKVDIVFGSRMAKDKRPLKRR 517
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 125/223 (56%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ SI PIL G DVL ++TGSGKTLA+ +P I+ +Q++R K ++G
Sbjct: 75 MGFTTLTPIQQKSIPPILAGRDVLGAAKTGSGKTLAFLLPAIEMMQDLRFK--PRNGTGV 132
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + ++ + + + GG +E ++ GI++L+ATPGRLL
Sbjct: 133 IVVSPTRELALQMFGVAREIMGTHSQTC-GIVMGGANRSAEATKLATGINLLIATPGRLL 191
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T+ + + LV+DEADRILD G+E ++ ++IL + + Q+ L SAT
Sbjct: 192 DHLQNTKGFVYKNLRMLVIDEADRILDAGFEDEMRAIVKILPESR---QTALFSATQTTK 248
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E K S VE L+QGY
Sbjct: 249 VEDLARVSLRPGPLYVNVEEETKHSTVEG---------LEQGY 282
>gi|50427631|ref|XP_462428.1| DEHA2G20372p [Debaryomyces hansenii CBS767]
gi|74600402|sp|Q6BH93.1|HAS1_DEBHA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49658098|emb|CAG90938.1| DEHA2G20372p [Debaryomyces hansenii CBS767]
Length = 568
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 269/490 (54%), Gaps = 49/490 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 122 MGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLRFK--PRNGTGV 179
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELALQ + +L + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 180 VVVSPTRELALQIFGVARELMAHHSQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 238
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 239 DHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILPNE--DRQSMLFSATQTTK 296
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ A ++ L+Q ++V R + L SF+
Sbjct: 297 VEDLARISLRPGPLYINVASESEASTVA-------GLEQGYVVCESDKRFLLLFSFL--- 346
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 347 KRNVKK----KIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 399
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 400 ATQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTAGKGKSLMFLTPS 459
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E + N ++ ++ L++L GN
Sbjct: 460 ELGFLRYLKAANVPLNEYEFP---TNKIA-NVQSQLTKLIKGNY---------------- 499
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA GY S+++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 500 ---WLHQSAKDGYRSYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNITIGAS 554
Query: 888 KNKEELKNKK 897
E K+KK
Sbjct: 555 GKSIEKKHKK 564
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 122 MGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLRFK--PRNGTGV 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELALQ + +L + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 180 VVVSPTRELALQIFGVARELMAHHSQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 238
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 239 DHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILPNE--DRQSMLFSATQT 294
>gi|26344732|dbj|BAC36015.1| unnamed protein product [Mus musculus]
Length = 660
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 263/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 185 EEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGT 242
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGR
Sbjct: 243 GVLILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGR 301
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 302 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D ++ D L+Q ++V P + R + L +F+
Sbjct: 359 RKVEDLARISLKKEPLYVGVDDDKEVATV-------DGLEQGYVVCPSEKRFLLLFTFL- 410
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 411 ------KKNRKKKVMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 461
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P + +HRVGRTAR + G +LL L
Sbjct: 462 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKECIHRVGRTARGLNGRGHALLILR 521
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + + S+++D +Q E
Sbjct: 522 PEELGFLRYLKQSKVPLNQFDF--------------SWSKVSD---------IQSQLEKL 558
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 559 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 611
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 187 MGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGV 244
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 245 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGRLL 303
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 304 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
>gi|328773869|gb|EGF83906.1| hypothetical protein BATDEDRAFT_15345 [Batrachochytrium
dendrobatidis JAM81]
Length = 460
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 279/487 (57%), Gaps = 50/487 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ SI P + G D+L ++TGSGKTLA+ IP I+ L +++ K ++G +II P
Sbjct: 1 MTEVQARSIPPAMTGRDILGAAKTGSGKTLAFLIPAIELLHKLQFK--PRNGCGVLIISP 58
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELALQ + +L + + L GG K+E ++ KG++++VATPGRLLDH ++
Sbjct: 59 TRELALQIFGVAKELFEHHSQTF-GILMGGANRKAEAEKLGKGVNLIVATPGRLLDHLQN 117
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T++ F ++ L++DEADRIL+ G+E ++ + + +L ++ Q++L SAT T V+ LA
Sbjct: 118 TKSFIFKNLKMLIIDEADRILEVGFEEEMHKIIGLLPTER---QTMLFSATQTTKVEDLA 174
Query: 595 GMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
++L+ P+ I+ + D+ + L+Q +++ P + R + L +F +
Sbjct: 175 RVSLKKAPLYINVDEHKDMATN-------EGLEQGYVICPSEQRFLLLFTF-------LK 220
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
++ + K++VF ++ + YH ELL+ + +I LHG Q +RT F F + +SGV
Sbjct: 221 KNLKKKIIVFFSSCNSVKYHAELLNFI---DIPVLDLHGKQKQQKRTSTFFEFVNAESGV 277
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
L+CTDVAARGLD+P VDWI+Q+ P +Y+HRVGRTAR G G +LLFL+P+E+ +
Sbjct: 278 LLCTDVAARGLDIPAVDWILQFDPPDDPREYIHRVGRTARAGGRGKALLFLLPTELGFLR 337
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L++ ++ + E + N ++ ++G L RL + N L+
Sbjct: 338 YLKHAKVPLNEYQFPP---NKIA-NVQGQLERLIEKNY-------------------YLN 374
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP-KNKEE 892
SA GY S+++ YAS+S L+ IF+ + L AK++ PSV +G K
Sbjct: 375 RSAKDGYRSYLQAYASHS--LKKIFDVGVLDLQRVAKAYGFTVPPSVNLTMGASGKTDRR 432
Query: 893 LKNKKMA 899
+NKK A
Sbjct: 433 QQNKKQA 439
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 113/173 (65%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ SI P + G D+L ++TGSGKTLA+ IP I+ L +++ K ++G +II P
Sbjct: 1 MTEVQARSIPPAMTGRDILGAAKTGSGKTLAFLIPAIELLHKLQFK--PRNGCGVLIISP 58
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELALQ + +L + + L GG K+E ++ KG++++VATPGRLLDH ++
Sbjct: 59 TRELALQIFGVAKELFEHHSQTF-GILMGGANRKAEAEKLGKGVNLIVATPGRLLDHLQN 117
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T++ F ++ L++DEADRIL+ G+E ++ + + +L ++ Q++L SAT T
Sbjct: 118 TKSFIFKNLKMLIIDEADRILEVGFEEEMHKIIGLLPTER---QTMLFSATQT 167
>gi|85091492|ref|XP_958928.1| ATP-dependent RNA helicase DDX18 [Neurospora crassa OR74A]
gi|74696328|sp|Q7S2N9.1|HAS1_NEUCR RecName: Full=ATP-dependent RNA helicase has-1
gi|28920320|gb|EAA29692.1| ATP-dependent RNA helicase DDX18 [Neurospora crassa OR74A]
Length = 578
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 262/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 125 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 182
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 183 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 241
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q ++L SAT T
Sbjct: 242 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDRQ--TMLFSATQTTK 298
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ + + L Q ++V R + L SF L K
Sbjct: 299 VEDLARISLRPGPLYVNVDEEKQFSTV-------EGLDQGYVVVDADKRFLLLFSF-LKK 350
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q + K++VF ++ + Y++ELL + ++ LHG Q +RT F F +
Sbjct: 351 MQ------KKKVIVFFSSCNSVKYYSELLQYI---DLQVLDLHGKQKQQKRTNTFFEFCN 401
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL P+
Sbjct: 402 AKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQPN 461
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E +L+V Q E +
Sbjct: 462 ELGFLAHLKAAKVPVVEYDFPKS--KILNV---------------------QSQLEKLIG 498
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA GY S++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 499 QNYYLNQSAKDGYRSYLHAYASHS--LRSVFDIHKLDLVKVAKSFGFSTPPRV 549
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 125 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 182
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 183 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 242 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDR--QTMLFSATQTTK 298
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E +FS VE LDQGY
Sbjct: 299 VEDLARISLRPGPLYVNVDEEKQFSTVEG---------LDQGY 332
>gi|254581554|ref|XP_002496762.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
gi|238939654|emb|CAR27829.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
Length = 494
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 277/495 (55%), Gaps = 51/495 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I++L + K ++G
Sbjct: 48 MGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIERLHSL--KFKPRNGTGV 105
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 106 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLVKGVNLLIATPGRLL 164
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 165 DHLQNTKGFVFKNLKALIIDEADRILEIGFEEEMRQIIKILPNEDRQ--SMLFSATQTTK 222
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D N+T + L+Q ++V R + L SF+
Sbjct: 223 VEDLARISLRAGPLFINVVSEKD--NST-----VEGLEQGYVVCDSDKRFLLLFSFL--- 272
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F +
Sbjct: 273 ----KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCN 325
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
+ G+L+ TDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL P+
Sbjct: 326 AERGILVSTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGAKGKGKSLMFLTPN 385
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A+ +Q E +
Sbjct: 386 ELGFLRYLKAAKVPLNE--------------YEFPTNKIAN---------VQSQLEKLIR 422
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH +A GY ++++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 423 SNYYLHQTAKDGYRAYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG-- 478
Query: 888 KNKEELKNKKMAINK 902
+ + L NKK +N+
Sbjct: 479 ASGKTLVNKKRKVNR 493
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I++L + K ++G
Sbjct: 48 MGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIERLHSL--KFKPRNGTGV 105
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 106 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLVKGVNLLIATPGRLL 164
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 165 DHLQNTKGFVFKNLKALIIDEADRILEIGFEEEMRQIIKILPNEDR--QSMLFSATQT 220
>gi|224054552|ref|XP_002298317.1| predicted protein [Populus trichocarpa]
gi|222845575|gb|EEE83122.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 261/486 (53%), Gaps = 51/486 (10%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
G+ +K + E M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L
Sbjct: 94 GLSEATRKTIQE-MGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLHN 152
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
+ + ++G V+I PTRELA+QT + L K + + + GG + E R+ K
Sbjct: 153 VH--FAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTL-GLVIGGAARRGEAERLVK 209
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
G+++LVATPGRLLDH ++T+ + ++ L +DEADRIL+ +E ++ + +++L K +
Sbjct: 210 GVNLLVATPGRLLDHLQNTKGFIYKNLKCLTIDEADRILEANFEEEMKQIIKLLPKAR-- 267
Query: 577 FQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPK 635
Q+ L SAT T V+ LA ++ Q P+ ID D + V + L+Q + V P
Sbjct: 268 -QTALFSATQTKKVEDLARLSFQTTPVYIDVDDGR-------TKVTNEGLQQGYCVVPSA 319
Query: 636 LRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMS 695
R V L SF + K++VF ++ + +H +LL + + F +HG
Sbjct: 320 KRFVLLYSFF-------KRNLSKKVMVFFSSCNSVKFHADLLRYI---QVECFDIHGKQK 369
Query: 696 QSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV- 754
Q +RT F F + G+L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR
Sbjct: 370 QQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGE 429
Query: 755 GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA 814
G +G++LLFLIP E++ + L+ ++ ++E E D +LA+
Sbjct: 430 GAKGNALLFLIPEELQFLRYLKAAKVPVKE--------------YEFDQKKLAN------ 469
Query: 815 ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
+Q E V L+ SA Y S++ Y S+S ++ IFN ++ L A SF
Sbjct: 470 ---VQSQLEKLVANNYYLNKSAKDAYRSYMLAYNSHS--MKDIFNVHRLDLQAVAASFCF 524
Query: 875 RDAPSV 880
P V
Sbjct: 525 SSPPKV 530
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L + + ++G
Sbjct: 106 MGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLHNVH--FAPRNGTGV 163
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELA+QT + L K + + + GG + E R+ KG+++LVATPGRLL
Sbjct: 164 VVICPTRELAIQTHAVAKDLLKYHSQTL-GLVIGGAARRGEAERLVKGVNLLVATPGRLL 222
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L +DEADRIL+ +E ++ + +++L K + Q+ L SAT T
Sbjct: 223 DHLQNTKGFIYKNLKCLTIDEADRILEANFEEEMKQIIKLLPKAR---QTALFSATQT 277
>gi|449019575|dbj|BAM82977.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 715
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 279/542 (51%), Gaps = 57/542 (10%)
Query: 341 YNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHP 400
+ ++P P+ T+ S + SL + P KP S L P ++ P P
Sbjct: 166 HEMEPLARPCPEVTQKSSPALQSLSSEHASEQEQP----KP-SSGLLTPHRFDSLPLSEP 220
Query: 401 FMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK 460
++ E M ++T +Q +I L G D+L ++TGSGKTLA+ IPI++ L + K
Sbjct: 221 TLRGI--EEMGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAK 276
Query: 461 ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISI 520
++G A+II PTRELA+Q + L S + + GG ++E ++ G +I
Sbjct: 277 WMPRNGTGAIIIAPTRELAMQIFGVLHDLA-SHHHQTRAIVMGGANRRTEAEKLINGTNI 335
Query: 521 LVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSI 580
LVATPGRLLDH + T F + LV+DEADR L+ G+E ++ E L IL K + Q++
Sbjct: 336 LVATPGRLLDHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR---QTM 392
Query: 581 LLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
L SAT T V+ LA ++ Q P+ + + + + L+Q F + P + R
Sbjct: 393 LFSATQTTKVEDLAKVSFQQKPLHLGI-------DAEQPVATVEGLQQGFTIVPSEQRFR 445
Query: 640 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSER 699
L +F+ ++ K++VFM++ + ++ ELL+ + ++ LHG QS+R
Sbjct: 446 LLFTFL-------KRNQRKKIIVFMSSCNGVKFYAELLNYI---DVPVLDLHGKQKQSKR 495
Query: 700 TEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EG 758
T F F + L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR H G
Sbjct: 496 TSTFFEFARREHATLLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGVHGRG 555
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATAL 818
++LFL+PSEV ++ L++ ++ + E + +LAD +
Sbjct: 556 RAILFLLPSEVGFLQHLRDAKVPLNEYEFPK--------------EKLAD---------I 592
Query: 819 QMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
Q E V L SA G+ S+++ YAS+S ++ +FN ++ + AKSF P
Sbjct: 593 QTQLEKLVEGNYYLQKSARDGFRSYLQAYASHS--MKDVFNVHELDIAAVAKSFGFSAPP 650
Query: 879 SV 880
+
Sbjct: 651 RI 652
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I L G D+L ++TGSGKTLA+ IPI++ L + K ++G A
Sbjct: 228 MGFARMTEIQARAIPLALSGRDILASARTGSGKTLAFLIPIVELL--YKAKWMPRNGTGA 285
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA+Q + L S + + GG ++E ++ G +ILVATPGRLL
Sbjct: 286 IIIAPTRELAMQIFGVLHDLA-SHHHQTRAIVMGGANRRTEAEKLINGTNILVATPGRLL 344
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T F + LV+DEADR L+ G+E ++ E L IL K + Q++L SAT T
Sbjct: 345 DHLQSTRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR---QTMLFSATQT 399
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 18/145 (12%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T F + LV+DEADR L+ G+E ++ E L IL K + Q++L SAT T V+ LA
Sbjct: 350 TRGFVFEHLRFLVIDEADRCLEIGFEEEMHEILRILPKTR---QTMLFSATQTTKVEDLA 406
Query: 247 GMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
++ Q P+ + + + + L+Q F + P + R L +F+
Sbjct: 407 KVSFQQKPLHLGI-------DAEQPVATVEGLQQGFTIVPSEQRFRLLFTFL-------K 452
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
++ K++VFM++ + ++ ELL+
Sbjct: 453 RNQRKKIIVFMSSCNGVKFYAELLN 477
>gi|389751758|gb|EIM92831.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 537
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 270/501 (53%), Gaps = 55/501 (10%)
Query: 388 APTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
AP PG PF L+E M T +T VQ SI P+L G DVL ++TGS
Sbjct: 10 APVPQASEPGREPFSTLELSEPTQKALAEMGFTTMTPVQAKSIPPLLAGKDVLGAARTGS 69
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLA+ IP ++ L + K ++G +I+ PTRELALQ + +L +
Sbjct: 70 GKTLAFLIPAVELLHRL--KFKPRNGTGIIIVSPTRELALQIFGVAKELMAHHSQTF-GI 126
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
+ GG ++E ++ KG++++VATPGRLLDH + T+ F ++ LV+DEADRIL+ G+E
Sbjct: 127 VIGGANRRAEADKLVKGVNLIVATPGRLLDHLQDTKGFVFRNLKALVIDEADRILEVGFE 186
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSL 619
++ + IL + Q S+L SAT T VQ LA ++L+ P+ ID +H + ++
Sbjct: 187 EEMKRIISILPNENRQ--SMLFSATQTTKVQDLARISLRPGPLYID------VHGSEETS 238
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 679
+ +L Q ++V P R + L +F+ ++ + K++VF ++ + YH ELL+
Sbjct: 239 TVA-TLSQGYVVCPSDRRFLLLFTFL-------KKNLKKKIVVFFSSCNSVKYHAELLNY 290
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPS 739
+ ++ LHG Q +RT F F + ++G+L+CTDVAARGLD+P VDWIVQ+ P
Sbjct: 291 I---DVPVLDLHGKQKQQKRTNTFFEFCNAETGILLCTDVAARGLDIPRVDWIVQFDPPD 347
Query: 740 SSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKM 799
DY+HRVGRTAR G G SLLFL+ SE+ + L+ ++ + E QN ++
Sbjct: 348 DPRDYIHRVGRTARAGKVGKSLLFLLESELGFLRFLKEAKVPLNEFTFP---QNKIA--- 401
Query: 800 EGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
+Q E + + LH SA GY S+++ YASYS L+ IF+
Sbjct: 402 -----------------NVQSQLEKLLQKNYFLHQSAKDGYRSYLQSYASYS--LKKIFD 442
Query: 860 FKQIHLGHFAKSFALRDAPSV 880
+ L K+F P V
Sbjct: 443 VNSLDLTKVGKAFGFSVPPRV 463
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 109/178 (61%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ SI P+L G DVL ++TGSGKTLA+ IP ++ L + K ++G
Sbjct: 39 MGFTTMTPVQAKSIPPLLAGKDVLGAARTGSGKTLAFLIPAVELLHRL--KFKPRNGTGI 96
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + + GG ++E ++ KG++++VATPGRLL
Sbjct: 97 IIVSPTRELALQIFGVAKELMAHHSQTF-GIVIGGANRRAEADKLVKGVNLIVATPGRLL 155
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T+ F ++ LV+DEADRIL+ G+E ++ + IL + QS+L SAT T
Sbjct: 156 DHLQDTKGFVFRNLKALVIDEADRILEVGFEEEMKRIISILPNE--NRQSMLFSATQT 211
>gi|185132644|ref|NP_001117993.1| myc-regulated DEAD box protein [Oncorhynchus mykiss]
gi|52547136|gb|AAU81664.1| myc-regulated DEAD box protein [Oncorhynchus mykiss]
Length = 663
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 276/500 (55%), Gaps = 71/500 (14%)
Query: 395 FPGIHPFMKKNLNEG---MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
F + P + +N +G M +T +Q SIQP+L+G D+L ++TGSGKTLA+ IP I
Sbjct: 171 FASLAPLVSENTLKGVKEMGFEHMTEIQHKSIQPLLEGRDILAAAKTGSGKTLAFLIPSI 230
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKM 507
+ + ++ K ++G VI+ PTRELA+QT E+ T +F I+ GG
Sbjct: 231 ELIYKL--KFMPRNGTGVVILSPTRELAMQTYGVMKELMTHHVHTFGLIM-----GGSNR 283
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
+E R+ G++ILVATPGRLLDH ++ + ++ L++DEADRIL+ G+E ++ + +
Sbjct: 284 TAEAQRLANGVNILVATPGRLLDHLQNAAGFMYKNLQCLIIDEADRILEVGFEEELKQII 343
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLK 626
++L K++ Q++L SAT T V+ LA ++L+ P+ + D+ D N T D L+
Sbjct: 344 KLLPKRR---QTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKD--NAT-----VDGLE 393
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q ++V P + R + L +F+ ++ + K++VF ++ +H ELL+ + ++
Sbjct: 394 QGYVVCPSEKRFMLLFTFL-------KKNRKKKLMVFFSSCMSVKFHYELLNYI---DLP 443
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
+HG Q++RT F F + SG+L+CTDVAARGLD+P VDWIVQY P +Y+H
Sbjct: 444 VMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIH 503
Query: 747 RVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEI-----KLKDCLQNLLSVKME 800
RVGRTAR + G +LL L P E+ + L+ ++ + E K+ D ++
Sbjct: 504 RVGRTARGINGIGHALLILRPEELGFLRFLKQAKVPLSEFEFSWAKISD---------IQ 554
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
G L++L + N LH SA + Y S+VR Y S+S L+ +++
Sbjct: 555 GQLNKLIEKNY-------------------YLHKSAQEAYKSYVRAYDSHS--LKAMYSV 593
Query: 861 KQIHLGHFAKSFALRDAPSV 880
++L A+SF P V
Sbjct: 594 NTLNLPMVAQSFGFTVPPYV 613
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SIQP+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 189 MGFEHMTEIQHKSIQPLLEGRDILAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGV 246
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
VI+ PTRELA+QT E+ T +F I+ GG +E R+ G++ILVATP
Sbjct: 247 VILSPTRELAMQTYGVMKELMTHHVHTFGLIM-----GGSNRTAEAQRLANGVNILVATP 301
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++ + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT
Sbjct: 302 GRLLDHLQNAAGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSAT 358
Query: 177 LT 178
T
Sbjct: 359 QT 360
>gi|150863803|ref|XP_001382401.2| RNA-dependent helicase [Scheffersomyces stipitis CBS 6054]
gi|158514819|sp|A3LNR6.2|HAS1_PICST RecName: Full=ATP-dependent RNA helicase HAS1
gi|149385059|gb|ABN64372.2| RNA-dependent helicase [Scheffersomyces stipitis CBS 6054]
Length = 567
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 266/490 (54%), Gaps = 49/490 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 121 MGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 178
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 179 IVVSPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLAKGVNLLIATPGRLL 237
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL K+ + QS+L SAT T
Sbjct: 238 DHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPKE--ERQSMLFSATQTTK 295
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ T + D L+Q ++V R + L SF+
Sbjct: 296 VEDLARISLRPGPLYINVVPET-------AASTADGLEQGYVVCDSDKRFLLLFSFL--- 345
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 346 ----KKYSKKKIIVFLSSCNSVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 398
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 399 AKQGTLVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSNGKGKSLMFLTPS 458
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E + N + V ++ LS+L N
Sbjct: 459 ELGFLRYLKAANVPLNEYEFP---TNKI-VNIQSQLSKLIKSNY---------------- 498
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA GY S+++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 499 ---WLHQSAKDGYRSYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNITIGAS 553
Query: 888 KNKEELKNKK 897
E K+KK
Sbjct: 554 GKSIEKKHKK 563
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 121 MGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 178
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 179 IVVSPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLAKGVNLLIATPGRLL 237
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL K+ + QS+L SAT T
Sbjct: 238 DHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPKE--ERQSMLFSATQT 293
>gi|336467939|gb|EGO56102.1| ATP-dependent RNA helicase has-1 [Neurospora tetrasperma FGSC 2508]
gi|350289823|gb|EGZ71048.1| ATP-dependent RNA helicase has-1 [Neurospora tetrasperma FGSC 2509]
Length = 578
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/473 (36%), Positives = 263/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 125 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 182
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 183 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 241
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q ++L SAT T
Sbjct: 242 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDRQ--TMLFSATQTTK 298
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ + + L Q ++V R + L SF L K
Sbjct: 299 VEDLARISLRPGPLYVNVDEEKQFSTV-------EGLDQGYVVVDADKRFLLLFSF-LKK 350
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q + K++VF ++ + Y++ELL + ++ LHG Q +RT F F +
Sbjct: 351 MQ------KKKVIVFFSSCNSVKYYSELLQYI---DLQVLDLHGKQKQQKRTNTFFEFCN 401
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL P+
Sbjct: 402 AKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQPN 461
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + +E D + NV Q E +
Sbjct: 462 ELGFLAHLKAAKVPV----------------VEYDFPKSKILNV-------QSQLEKLIG 498
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA GY S++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 499 QNYYLNQSAKDGYRSYLHAYASHS--LRSVFDIHKLDLVKVAKSFGFSTPPRV 549
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 125 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 182
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 183 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 242 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDR--QTMLFSATQTTK 298
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E +FS VE LDQGY
Sbjct: 299 VEDLARISLRPGPLYVNVDEEKQFSTVEG---------LDQGY 332
>gi|453086687|gb|EMF14729.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 687
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 280/528 (53%), Gaps = 64/528 (12%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
+ +NE M +T +Q+ ++ P+L G DVL ++TGSGKTLA+ IP ++ L +R K
Sbjct: 222 RAINE-MKFENMTEIQRRAMGPLLAGKDVLGAAKTGSGKTLAFLIPCVELLHALRFKP-- 278
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +++ PTRELALQ + +L + + + GG ++E ++ KG+++L+A
Sbjct: 279 RNGTGVIVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLAKGVNLLIA 337
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L S
Sbjct: 338 TPGRLLDHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKE--DRQTMLFS 395
Query: 584 ATLTPAVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V LA ++L + P+ I+ D + L+Q +++ +R L
Sbjct: 396 ATQTTKVADLARVSLRERPLYINVDDKQEYSTVA-------GLEQGYVICDSDMRFRLLF 448
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ + K++VF ++ + Y++ELL+ + ++ LHG Q +RT
Sbjct: 449 TFL-------KRHPKKKIIVFFSSCNCVKYYSELLNYI---DLPVLDLHGKQKQQKRTNT 498
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSL 761
F F + SG LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL
Sbjct: 499 FFEFCNATSGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANAKGKSL 558
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
+FL PSEV + L+ ++ + E ++ + +L + Q
Sbjct: 559 MFLQPSEVGFLSHLKEAKVPLVEFEIPP--KKILDI---------------------QSQ 595
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E + + L+ SA GY S+++ YAS+S LR +F+ ++ L AK F P V
Sbjct: 596 LEMLIGKNYYLNKSAKDGYRSYLQAYASHS--LRTVFDIHKLDLKKVAKGFGFSVPPKVD 653
Query: 882 SGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSGLPQRK 929
+G K + + R N+ + +F G P R+
Sbjct: 654 INLGASMKKPD--------------QARRNYGSQPGQRKFQGGKPMRR 687
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 115/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ ++ P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 227 MKFENMTEIQRRAMGPLLAGKDVLGAAKTGSGKTLAFLIPCVELLHALRFKP--RNGTGV 284
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 285 IVVSPTRELALQIFGVARELMEHHSQTF-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 343
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 344 DHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKE--DRQTMLFSATQT 399
>gi|156841974|ref|XP_001644357.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114998|gb|EDO16499.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 501
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 269/493 (54%), Gaps = 49/493 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 53 EKMGFTSMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGT 110
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++LVATPGR
Sbjct: 111 GVIVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLIKGVNMLVATPGR 169
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 170 LLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNEDRQ--SMLFSATQT 227
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ D D L+Q ++V R + L SF+
Sbjct: 228 TKVEDLARISLRKGPLFINVVTERDTSTA-------DGLEQGYVVCESDKRFLLLFSFL- 279
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 280 ------KRNQKKKIIVFLSSCNSVRYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 330
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL
Sbjct: 331 CNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 390
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E E +++A+ +Q E
Sbjct: 391 PNELGFLRYLKAAKVPLNE--------------FEFPTNKIAN---------VQSQLEKL 427
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ LH A GY S+++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 428 ISSNYHLHQIAKDGYRSYLQAYASHS--LKTVYQIDKLDLTKVAKSYGFPIPPKVNITIG 485
Query: 886 KPKNKEELKNKKM 898
+K +K+
Sbjct: 486 ASGKTPVIKKRKV 498
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 55 MGFTSMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGTGV 112
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 113 IVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLIKGVNMLVATPGRLL 171
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 172 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNEDR--QSMLFSATQT 227
>gi|407851520|gb|EKG05406.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 827
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 208/673 (30%), Positives = 318/673 (47%), Gaps = 123/673 (18%)
Query: 330 STKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIP----NVP-TRRLKPVSE 384
S K++K+ + + +D E K +S F D P N+P + L V E
Sbjct: 72 SEPKRLKRKRTWTLDAGEDEFRSKATAESRAFRGQFAAFADAPLKNKNIPPSYSLSTVFE 131
Query: 385 ALFAPTSYEEFPG----IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGG-DVLVRSQTG 439
A A E P +H + + L E ++IT +T +Q+ S P++D DVL+RS+TG
Sbjct: 132 ADKACVDAESLPPLNELVHSKLLRPLTECLHITSLTRIQKQSWTPMVDRTRDVLLRSETG 191
Query: 440 SGKTLAYAIPIIQKL---QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
SGKTLAYA+P++ +L + RP I R+ G +++ PTREL +Q ++ + L + ++
Sbjct: 192 SGKTLAYALPLLHQLLCECDARP-IQRQIGTIIIVLCPTRELVVQVTDVLSVLTRCALFL 250
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
+ GGE EKAR+RKG+ +L+ATPGRLLDH + T + + + +VLDEADR+LD
Sbjct: 251 TVGGIHGGENRHKEKARLRKGVPLLIATPGRLLDHLRATVSFCVASTQTIVLDEADRLLD 310
Query: 557 QGYERDIAEFLEIL-----------------KKQKPQFQSILLSATLTPAVQRLAGMTLQ 599
G+ER I E + +L ++K + +L+SAT+T V+RL+ L+
Sbjct: 311 MGFERAIKEIMGLLLEKTENSACSCDEIFTETREKYTLKRVLVSATITAEVERLSHFALR 370
Query: 600 NPIQIDAADSTDIHNTTDSL-----VIP----------------DSLKQHFIVTPPKLRL 638
+ + + ++ D + SL ++P D+ Q IV
Sbjct: 371 SNV-VRVGETEDTFSIPSSLRQHYALVPIKHRLSTLIGFLRSQIDAGAQRIIVFVSTADS 429
Query: 639 VALASFILGKCQNVNEDEESKMLVFMATQ------------DMADYHTELLS-------- 678
+L + Q+ D ++L A++ + A+ H + S
Sbjct: 430 AEFHYRLLSRLQSPFCDRRKEVLFKGASKQNARQYGVKRRVEEANRHVQNQSEAIVTFED 489
Query: 679 ------------TVLGEN----IAFFKLHGSMSQSERTEVFKTFRSVKS-------GVLI 715
T+ G N + KLHG+MSQ +R VFK F+ V GVL
Sbjct: 490 DSGSEDDNDEGQTLSGRNALLDVNILKLHGNMSQVDRASVFKAFKHVGEAARRSLKGVLF 549
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL 775
CTDVAARGLD+P VDWIV Y P+ YVHR+GRTAR+G+ G SLLFL+P E V L
Sbjct: 550 CTDVAARGLDMPRVDWIVHYDPPTDPACYVHRIGRTARIGNVGDSLLFLMPHEAGYVPYL 609
Query: 776 Q-------------NRRIRIEEIKLKDCLQNLLS--VKMEGDLSRL---ADGNVETAATA 817
N + K ++ L K++ + + + +E A +
Sbjct: 610 SKFIAKESGSSFTGNEAAAVVATMEKRNYESFLYYLAKLDPKSNHIWMQSTATLERAISR 669
Query: 818 LQMSFESAVLQQKILHTS--------ACKGYTSWVRFYASYSKDLR-HIFNFKQIHLGHF 868
L M+ E V + S A Y S++R YA +S++L+ FN +HLGH
Sbjct: 670 LVMNREEPVNELPAGDASRNDDLTRLALFAYQSYIRAYAGHSRELKTRFFNLDMLHLGHI 729
Query: 869 AKSFALRDAPSVI 881
A SF L PS +
Sbjct: 730 AHSFGLDKRPSEV 742
Score = 176 bits (445), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 178/334 (53%), Gaps = 60/334 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKL---QEMRPKISRKD 56
++IT +T +Q+ S P++D DVL+RS+TGSGKTLAYA+P++ +L + RP I R+
Sbjct: 161 LHITSLTRIQKQSWTPMVDRTRDVLLRSETGSGKTLAYALPLLHQLLCECDARP-IQRQI 219
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G +++ PTREL +Q ++ + L + ++ + GGE EKAR+RKG+ +L+ATP
Sbjct: 220 GTIIIVLCPTRELVVQVTDVLSVLTRCALFLTVGGIHGGENRHKEKARLRKGVPLLIATP 279
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH + T + + + +VLDEADR+LD G+ER I E + +LL T
Sbjct: 280 GRLLDHLRATVSFCVASTQTIVLDEADRLLDMGFERAIKEIM-----------GLLLEKT 328
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
A C C D I + ++K + VL+SA
Sbjct: 329 ENSA-CSC-------------------DEIFTE-------------TREKYTLKRVLVSA 355
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
T+T V+RL+ L++ + + T D+ IP SL+QH+ + P K RL L F
Sbjct: 356 TITAEVERLSHFALRSNV-------VRVGETEDTFSIPSSLRQHYALVPIKHRLSTLIGF 408
Query: 297 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ + + +++VF++T D A++H LLS
Sbjct: 409 LRSQI----DAGAQRIIVFVSTADSAEFHYRLLS 438
>gi|442751645|gb|JAA67982.1| Putative atp-dependent rna helicase pitchoune [Ixodes ricinus]
Length = 589
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 278/514 (54%), Gaps = 50/514 (9%)
Query: 379 LKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQT 438
L S + + T ++ G+ + M TQ+T +Q +I +L+G D++ ++T
Sbjct: 85 LPGTSLGVLSDTRFDSLKGVVSEASLKAVKAMGFTQMTEIQAKTIPHLLEGRDMVAAAKT 144
Query: 439 GSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVP 498
GSGKTLA+ IP ++ L ++ K ++G A++I PTRELA+QT + +L +
Sbjct: 145 GSGKTLAFLIPAVELLSKL--KFMPRNGTGALVIAPTRELAMQTFGVLQELLTHQNQTL- 201
Query: 499 SWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQG 558
+ GG +SE ++ KG++ LVATPGRLLDH ++T + ++ L++DEADRILD G
Sbjct: 202 GLIMGGTSRQSEANKLAKGVNFLVATPGRLLDHLQNTSEFVYKNLQCLIIDEADRILDIG 261
Query: 559 YERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTD 617
+E ++ + L +L K++ Q++L SATLT + L + L++ P+ I + N
Sbjct: 262 FEEEMKQILRLLPKRR---QTMLFSATLTKKTEDLVKVALKSEPLYIGLDE-----NKEQ 313
Query: 618 SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 677
+ V + L+Q ++V P R + L +F+ ++ + K++VF ++ YH ELL
Sbjct: 314 ATV--EGLEQGYVVCPSDKRFLLLFTFL-------KKNRKKKVMVFFSSCLSVKYHHELL 364
Query: 678 STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
+ + ++ +HG Q++RT F F + +G+L+CTDVAARGLD+P VDWIVQY
Sbjct: 365 NYI---DLPVMSIHGKQKQAKRTTTFFQFCNADTGILLCTDVAARGLDIPEVDWIVQYDP 421
Query: 738 PSSSTDYVHRVGRTARV-GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P +Y+HRVGRTAR G G +LL L P EV + L+ ++ ++E
Sbjct: 422 PDDPKEYIHRVGRTARGEGGSGHALLILRPEEVGFLRYLKVAKVPLQEF----------- 470
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
E +++A+ +Q E + + LH SA + Y ++VR Y S+ L+
Sbjct: 471 ---EFSWTKIAN---------IQPQLEKLITKNYFLHMSAKEAYKAYVRAYDSHH--LKS 516
Query: 857 IFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNK 890
IF+ + L AKSF PSV +G K +
Sbjct: 517 IFDVNTLDLIQVAKSFGFTVPPSVDLHVGSSKAR 550
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M TQ+T +Q +I +L+G D++ ++TGSGKTLA+ IP ++ L ++ K ++G A
Sbjct: 116 MGFTQMTEIQAKTIPHLLEGRDMVAAAKTGSGKTLAFLIPAVELLSKL--KFMPRNGTGA 173
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L + + GG +SE ++ KG++ LVATPGRLL
Sbjct: 174 LVIAPTRELAMQTFGVLQELLTHQNQTL-GLIMGGTSRQSEANKLAKGVNFLVATPGRLL 232
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T + ++ L++DEADRILD G+E ++ + L +L K++ Q++L SATLT
Sbjct: 233 DHLQNTSEFVYKNLQCLIIDEADRILDIGFEEEMKQILRLLPKRR---QTMLFSATLTKK 289
Query: 181 T 181
T
Sbjct: 290 T 290
>gi|432930301|ref|XP_004081420.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Oryzias latipes]
Length = 643
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +++P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 169 MGFQHMTEIQHKTVRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGV 226
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELA+QT + +L + GG +E R+ G++ILVATPGRLL
Sbjct: 227 IILSPTRELAMQTYGVLKELMTHHVHTY-GLIMGGSNRSAEAQRLANGVNILVATPGRLL 285
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH + T F ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 286 DHLQXTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSATQTRR 342
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ + D+ D N T D L+Q ++V P + R + L +F+
Sbjct: 343 VEDLARISLKKEPLYVGVDDNKD--NAT-----VDGLEQGYVVCPSEKRFLLLFTFL--- 392
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ +H ELL+ + ++ +HG Q++RT F F +
Sbjct: 393 ----KKNRKKKLMVFFSSCMSVKFHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQFCN 445
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR + G +LL L P
Sbjct: 446 ADSGILLCTDVAARGLDIPEVDWIIQYDPPDDPKEYIHRVGRTARGIDGRGHALLILRPE 505
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S+++D +Q E +
Sbjct: 506 ELGFLRFLKQAKVPLSEF--------------EFSWSKISD---------IQSQLEKLIE 542
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + Y S+VR Y S+S L+ I++ ++L A SF + P V
Sbjct: 543 KNYYLHKSAQEAYKSYVRAYDSHS--LKQIYSVNTLNLPMVALSFGFKVPPYV 593
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +++P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 169 MGFQHMTEIQHKTVRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGV 226
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E R+ G++ILVATPGRLL
Sbjct: 227 IILSPTRELAMQTYGVLKELMTHHVHTY-GLIMGGSNRSAEAQRLANGVNILVATPGRLL 285
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T F ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 286 DHLQXTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSATQT 340
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 83/145 (57%), Gaps = 18/145 (12%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T F ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T V+ LA
Sbjct: 291 TPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSATQTRRVEDLA 347
Query: 247 GMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
++L+ P+ + D+ D N T D L+Q ++V P + R + L +F+
Sbjct: 348 RISLKKEPLYVGVDDNKD--NAT-----VDGLEQGYVVCPSEKRFLLLFTFL-------K 393
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ +H ELL+
Sbjct: 394 KNRKKKLMVFFSSCMSVKFHYELLN 418
>gi|3342758|gb|AAC27683.1| helicase pitchoune [Drosophila melanogaster]
Length = 663
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 278/513 (54%), Gaps = 62/513 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 188 MGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 245
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 246 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 304
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 305 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 361
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 362 IEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 411
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 412 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 464
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +HRVGRTAR G G +LL + P
Sbjct: 465 AESGILLCTDVAARGLDIPQVDWIVQYDPPGDQASIIHRVGRTARGSGTSGHALLLMRPE 524
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 525 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 561
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V + +P
Sbjct: 562 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVARP 619
Query: 888 KNKEELKN---------KKM---AINKEKSFKQ 908
+ + KKM + +K++ FKQ
Sbjct: 620 SGSDRKSDVGGGGFGFYKKMNEGSASKQRHFKQ 652
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 188 MGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 245
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 246 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 304
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 305 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 360
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 361 RIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 420
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 421 VFFSSCMS 428
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 315 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 371
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 372 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 417
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 418 KVMVFFSSCMSVKYHHELFN 437
>gi|197100857|ref|NP_001126280.1| ATP-dependent RNA helicase DDX18 [Pongo abelii]
gi|55730937|emb|CAH92187.1| hypothetical protein [Pongo abelii]
Length = 670
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 264/475 (55%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLD ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDDMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CT VAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTGVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLD ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDDMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>gi|71416692|ref|XP_810344.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70874860|gb|EAN88493.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 827
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 208/673 (30%), Positives = 318/673 (47%), Gaps = 123/673 (18%)
Query: 330 STKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIP----NVP-TRRLKPVSE 384
S K++K+ + +D + E K +S F D P N+P + L V E
Sbjct: 72 SEPKRLKRKRTSTLDAEEDEFRSKATAESRAFRGQFPAFADAPLKNKNIPPSSSLSTVFE 131
Query: 385 ALFAPTSYEEFPG----IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGG-DVLVRSQTG 439
A A E P +H + + L E ++IT +T +Q+ S P++D DVL+RS+TG
Sbjct: 132 ADKACVDAESLPPLNELVHSKLLRPLTECLHITSLTCIQKQSWTPMVDRTRDVLLRSETG 191
Query: 440 SGKTLAYAIPIIQKL---QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
SGKTLAYA+P++ +L + RP I R+ G +++ PTREL +Q ++ + L + ++
Sbjct: 192 SGKTLAYALPLLHQLLCECDARP-IQRQIGSIIIVLCPTRELVVQVTDVLSVLARCALFL 250
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
+ GGE EKAR+RKG+ +L+ATPGRLLDH + T + + + +VLDEADR+LD
Sbjct: 251 TVGGIHGGENRHKEKARLRKGVPLLIATPGRLLDHLRATVSFCVASTQTIVLDEADRLLD 310
Query: 557 QGYERDIAEFLEIL-----------------KKQKPQFQSILLSATLTPAVQRLAGMTLQ 599
G+ER I E + +L ++K + +L+SAT+T V+RL+ L+
Sbjct: 311 MGFERAIKEIMGLLLEKTENSACSCDEIFTETREKYTLKRVLVSATITAEVERLSHFALR 370
Query: 600 NPIQIDAADSTDIHNTTDSL-----VIP----------------DSLKQHFIVTPPKLRL 638
+ + + ++ D + SL ++P D+ Q IV
Sbjct: 371 SNV-VRVGETEDTFSIPSSLRQHYALVPIKHRLSTLIGFLRSQIDAGAQRIIVFVSTADS 429
Query: 639 VALASFILGKCQNVNEDEESKMLVFMATQ------------DMADYHTELLS-------- 678
+L + Q+ D ++L A++ + A+ H + S
Sbjct: 430 AEFHYRLLSRLQSPFCDRRKEVLFKGASKQNARQYGVKRRVEEANRHVQNQSEAIVTFED 489
Query: 679 ------------TVLGEN----IAFFKLHGSMSQSERTEVFKTFRSVKS-------GVLI 715
T+ G N + KLHG+MSQ +R VFK F+ V GVL
Sbjct: 490 DSGSEDDNDEGQTLSGRNALLDVNILKLHGNMSQVDRASVFKAFKHVGGAARRSLKGVLF 549
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL 775
CTDVAARGLD+P VDWIV Y P+ YVHR+GRTAR+G+ G SLLFL+P E V L
Sbjct: 550 CTDVAARGLDMPRVDWIVHYDPPTDPACYVHRIGRTARIGNVGDSLLFLMPHEAGYVPYL 609
Query: 776 Q-------------NRRIRIEEIKLKDCLQNLLS--VKMEGDLSRL---ADGNVETAATA 817
N + K ++ L K++ + + + +E A +
Sbjct: 610 SKFIAKESGSSFTGNEAAAVVATMEKRNYESFLYYLAKLDPKSNHIWMQSTATLERAISR 669
Query: 818 LQMSFESAVLQQKILHTS--------ACKGYTSWVRFYASYSKDLR-HIFNFKQIHLGHF 868
L M+ E V + S A Y S++R YA +S++L+ FN +HLGH
Sbjct: 670 LVMNREEPVNELPAGDASRNDDLTRLALFAYQSYIRAYAGHSRELKTRFFNLDMLHLGHI 729
Query: 869 AKSFALRDAPSVI 881
A SF L PS +
Sbjct: 730 AHSFGLDKRPSEV 742
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 178/334 (53%), Gaps = 60/334 (17%)
Query: 1 MNITQVTTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKL---QEMRPKISRKD 56
++IT +T +Q+ S P++D DVL+RS+TGSGKTLAYA+P++ +L + RP I R+
Sbjct: 161 LHITSLTCIQKQSWTPMVDRTRDVLLRSETGSGKTLAYALPLLHQLLCECDARP-IQRQI 219
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G +++ PTREL +Q ++ + L + ++ + GGE EKAR+RKG+ +L+ATP
Sbjct: 220 GSIIIVLCPTRELVVQVTDVLSVLARCALFLTVGGIHGGENRHKEKARLRKGVPLLIATP 279
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH + T + + + +VLDEADR+LD G+ER I E + +LL T
Sbjct: 280 GRLLDHLRATVSFCVASTQTIVLDEADRLLDMGFERAIKEIM-----------GLLLEKT 328
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
A C C D I + ++K + VL+SA
Sbjct: 329 ENSA-CSC-------------------DEIFTE-------------TREKYTLKRVLVSA 355
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
T+T V+RL+ L++ + + T D+ IP SL+QH+ + P K RL L F
Sbjct: 356 TITAEVERLSHFALRSNV-------VRVGETEDTFSIPSSLRQHYALVPIKHRLSTLIGF 408
Query: 297 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ + + +++VF++T D A++H LLS
Sbjct: 409 LRSQI----DAGAQRIIVFVSTADSAEFHYRLLS 438
>gi|238504232|ref|XP_002383347.1| ATP-dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220690818|gb|EED47167.1| ATP-dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 696
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 302/586 (51%), Gaps = 72/586 (12%)
Query: 342 NIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPF 401
N + E E KS + N D+P+ T RL P + P + E G+
Sbjct: 165 NTEESEQEASDNEEEKSDAEETPAANGEDLPSADTIRL-PQQDG--DPVKFTEL-GLSEK 220
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
K + EGM +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K
Sbjct: 221 TMKGI-EGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP 279
Query: 462 SRKDGIYAVIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
++G A+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG
Sbjct: 280 --RNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKG 332
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLV---------LDEADRILDQGYERDIAEFLE 568
+++LVATPGRLLDH ++T+ F + L+ +DEADRIL+ G+E ++ + +
Sbjct: 333 VNLLVATPGRLLDHLQNTQGFVFKNLRTLISTINLFRIAIDEADRILEVGFEDEMRQIAK 392
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
IL + Q++L SAT T V+ LA ++L+ P+ I+ D H+T + L +Q
Sbjct: 393 ILPSE--NRQTMLFSATQTTKVEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQ 443
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
+++ R + L SF+ + K++VF+++ + Y+ ELL+ + ++
Sbjct: 444 GYVICEADKRFLLLFSFL-------KRNLRKKIIVFLSSCNSVKYYGELLNYI---DLPV 493
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
LHG Q +RT F F + K G LICTDVAARGLD+P VDWI+Q+ P DY+HR
Sbjct: 494 LDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHR 553
Query: 748 VGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
VGRTAR + +G SL+FL PSEV ++ L+ R+ + E Q +++V
Sbjct: 554 VGRTARGSNGKGRSLMFLQPSEVGFLKHLKEARVPVVEFDFP--TQKIVNV--------- 602
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
Q E + Q L+ SA +GY S+++ YAS+S LR +F+ ++ L
Sbjct: 603 ------------QSQLEKLIGQNYYLNKSAKEGYRSYLQAYASHS--LRSVFDVHKLDLV 648
Query: 867 HFAKSFALRDAPSVISGIGKP-KNKEELKNKKMAINKEKSFKQRGN 911
+K F P + +G K+K + FK++ N
Sbjct: 649 KVSKGFGFSTPPRIDIQLGSSLKDKPPQGRRNYGSQPGSKFKRKHN 694
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 164/335 (48%), Gaps = 80/335 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K ++G A
Sbjct: 228 MGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP--RNGTGA 285
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG+++LVATP
Sbjct: 286 IIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKGVNLLVATP 340
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T QG+ + K + +I L
Sbjct: 341 GRLLDHLQNT---------------------QGF---------VFKNLRTLISTINLF-- 368
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
+ +DEADRIL+ G+E ++ + +IL + Q++L SA
Sbjct: 369 --------------------RIAIDEADRILEVGFEDEMRQIAKILPSE--NRQTMLFSA 406
Query: 237 TLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
T T V+ LA ++L+ P+ I+ D H+T + L+Q +++ R + L S
Sbjct: 407 TQTTKVEDLARISLRPGPLYIN-VDHRKEHSTV------EGLEQGYVICEADKRFLLLFS 459
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
F+ + K++VF+++ + Y+ ELL+
Sbjct: 460 FL-------KRNLRKKIIVFLSSCNSVKYYGELLN 487
>gi|365984861|ref|XP_003669263.1| hypothetical protein NDAI_0C03600 [Naumovozyma dairenensis CBS 421]
gi|343768031|emb|CCD24020.1| hypothetical protein NDAI_0C03600 [Naumovozyma dairenensis CBS 421]
Length = 519
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 266/499 (53%), Gaps = 49/499 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T VQ +I P++ G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 67 EKMGFESLTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGT 124
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGR
Sbjct: 125 GIIVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLMKGVNILIATPGR 183
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + + IL + Q S+L SAT T
Sbjct: 184 LLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIRILPNEDRQ--SMLFSATQT 241
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ D D L+Q ++V R + L SF+
Sbjct: 242 TKVEDLARISLRKGPLFINVESEKDTSTA-------DGLEQGYVVCDSDKRFLLLFSFL- 293
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K L F ++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 294 ------KRNQKRKSLSFYSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 344
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL
Sbjct: 345 CNADKGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 404
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E E +++A+ +Q E
Sbjct: 405 PNELGFLRYLKAAKVPLNE--------------YEFPTNKIAN---------VQSQLEKL 441
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ LH +A GY S+++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 442 IKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFSIPPKVNITIG 499
Query: 886 KPKNKEELKNKKMAINKEK 904
++ K+ N ++
Sbjct: 500 ASGKTDKTNTKRRKTNNQR 518
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P++ G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 69 MGFESLTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGI 126
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 127 IVITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLMKGVNILIATPGRLL 185
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ L++DEADRIL+ G+E ++ + + IL + QS+L SAT T
Sbjct: 186 DHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIRILPNEDR--QSMLFSATQT 241
>gi|195112586|ref|XP_002000853.1| GI10456 [Drosophila mojavensis]
gi|193917447|gb|EDW16314.1| GI10456 [Drosophila mojavensis]
Length = 748
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 279/518 (53%), Gaps = 51/518 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 270 EEMGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGT 327
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGR
Sbjct: 328 GVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLSKGINILVATPGR 386
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 387 LLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT 443
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
+ L+ + L+ PI + +H+ ++ + + L+Q +IV P + RL+ L +F+
Sbjct: 444 ERIDALSKLALKKEPIYVG------VHDNQETATV-EGLEQGYIVCPSEKRLLVLFTFL- 495
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F
Sbjct: 496 ------KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQF 546
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L
Sbjct: 547 CNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLMLR 606
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E ++AD +Q+ E
Sbjct: 607 PEELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKL 643
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 644 ISKNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVG 701
Query: 886 KPK-NKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
K + E + K +RG K+++ + +
Sbjct: 702 AAKRERPEKRVGGGGFGYYKQMNERGGGHKQRVFKQIN 739
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 272 MGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 329
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 330 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLSKGINILVATPGRLL 388
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 389 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT 443
>gi|189234356|ref|XP_973872.2| PREDICTED: similar to pitchoune CG6375-PB [Tribolium castaneum]
Length = 695
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 263/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 148 MGFTTLTEIQARSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 205
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + + GG ++E ++ KGI+ILVATPGRLL
Sbjct: 206 IIISPTRELSMQTFGVLKELMK-YHHHTYGLVMGGTSRQTEAQKLSKGINILVATPGRLL 264
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 265 DHMQNTPDFLFKNLQCLVIDEADRILDIGFEEEMKQIINLLPKRR---QTMLFSATQTKK 321
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L+ PI + D+ T L+Q ++V P + RL+ L +F+
Sbjct: 322 TEALTSLALKKEPIYVGVDDAKSEATVT-------GLEQGYVVCPSEKRLLVLFTFL--- 371
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ +H EL + + ++ +HG Q++RT F F +
Sbjct: 372 ----KKNRKKKVMVFFSSCMSVKFHHELFNYI---DLPVMCIHGKQKQAKRTTTFFQFCN 424
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 425 AESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 484
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++AD +Q+ E+ +
Sbjct: 485 ELGFLRYLKQAKVPLNE--------------FEFSWNKIAD---------IQLQLENLIG 521
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ SA + + ++VR Y S+ L+ IF+ + L SF + P+V
Sbjct: 522 KNYFLNMSAKEAFKAYVRAYDSHH--LKTIFDISTLDLAKVGLSFGFKVPPAV 572
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 148 MGFTTLTEIQARSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 205
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + + GG ++E ++ KGI+ILVATPGRLL
Sbjct: 206 IIISPTRELSMQTFGVLKELMK-YHHHTYGLVMGGTSRQTEAQKLSKGINILVATPGRLL 264
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T F ++ LV+DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 265 DHMQNTPDFLFKNLQCLVIDEADRILDIGFEEEMKQIINLLPKRR---QTMLFSATQTKK 321
Query: 181 T 181
T
Sbjct: 322 T 322
>gi|157111113|ref|XP_001651396.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108878542|gb|EAT42767.1| AAEL005744-PA [Aedes aegypti]
Length = 603
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 266/477 (55%), Gaps = 52/477 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q +I P+L+G D++ ++TGSGKTLA+ IP+++ + +++ K ++G
Sbjct: 128 MGFTKMTEIQAKAIPPLLEGRDLIGSAKTGSGKTLAFLIPVVELINKLQFK--PRNGTGV 185
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELA+Q + +L L GG +E ++ KG++I+VATPGRLL
Sbjct: 186 IIISPTRELAMQIFGVLKELMAHHHHTY-GLLMGGASRHTENEKLGKGLNIVVATPGRLL 244
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K T F ++ LV+DE DRIL+ G+E D+ + + IL K++ Q++L SAT T
Sbjct: 245 DHLKGTPNFLFKNLQCLVIDECDRILEIGFEEDMKQIISILPKKR---QTMLFSATQTSR 301
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L++ PI + D H T ++ L+Q +IV P + RL+ L +F+
Sbjct: 302 TEELGKLALKSEPIYV----GVDDHKTEATVT---GLEQGYIVCPSEKRLLVLFTFL--- 351
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT VF F +
Sbjct: 352 ----KKNRKKKVMVFFSSCLSVKYHHELFNYI---DLPVNSIHGKQKQAKRTSVFFQFCN 404
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLLFLIP 766
+SG+L+CTDVAARGLD+P VDWIVQY P+ + +Y+HRVGRTAR G G +LL L P
Sbjct: 405 AESGILLCTDVAARGLDIPAVDWIVQYDPPNDTKEYIHRVGRTAR-GENICGHALLLLRP 463
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
EV+ ++ L+ ++ + E E S++AD +Q+ E+ +
Sbjct: 464 EEVEFLKYLKQAKVPLNE--------------FEFSWSKIAD---------IQLQLENLL 500
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+ L+ S + S+VR Y + ++ +FN + L AK+F P V G
Sbjct: 501 SKNYFLNQSGKLAFKSYVRAYEGHH--MKDVFNVGNLDLVKVAKNFGFTQPPYVDFG 555
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 114/181 (62%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q +I P+L+G D++ ++TGSGKTLA+ IP+++ + +++ K ++G
Sbjct: 128 MGFTKMTEIQAKAIPPLLEGRDLIGSAKTGSGKTLAFLIPVVELINKLQFK--PRNGTGV 185
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA+Q + +L L GG +E ++ KG++I+VATPGRLL
Sbjct: 186 IIISPTRELAMQIFGVLKELMAHHHHTY-GLLMGGASRHTENEKLGKGLNIVVATPGRLL 244
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T F ++ LV+DE DRIL+ G+E D+ + + IL K++ Q++L SAT T
Sbjct: 245 DHLKGTPNFLFKNLQCLVIDECDRILEIGFEEDMKQIISILPKKR---QTMLFSATQTSR 301
Query: 181 T 181
T
Sbjct: 302 T 302
>gi|336265007|ref|XP_003347278.1| hypothetical protein SMAC_08715 [Sordaria macrospora k-hell]
gi|380087768|emb|CCC05223.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 586
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 262/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 132 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 189
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 190 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 248
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 249 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKE--DRQTMLFSATQTTK 305
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ + + L Q ++V R + L SF L K
Sbjct: 306 VEDLARISLRPGPLYVNVDEEKQFSTV-------EGLDQGYVVVDADKRFLLLFSF-LKK 357
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q + K++VF ++ + Y++ELL + ++ LHG Q +RT F F +
Sbjct: 358 MQ------KKKVIVFFSSCNSVKYYSELLQYI---DLQVLDLHGKQKQQKRTNTFFEFCN 408
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL P+
Sbjct: 409 ATQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQPN 468
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + +E D + NV Q E +
Sbjct: 469 ELGFLAHLKAAKVPV----------------VEYDFPKSKILNV-------QSQLEKLIG 505
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA GY S++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 506 QNYYLNQSAKDGYRSYLHAYASHS--LRSVFDIHKLDLVKVAKSFGFSTPPRV 556
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 132 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 189
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 190 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 248
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 249 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKE--DRQTMLFSATQTTK 305
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E +FS VE LDQGY
Sbjct: 306 VEDLARISLRPGPLYVNVDEEKQFSTVEG---------LDQGY 339
>gi|402084250|gb|EJT79268.1| ATP-dependent RNA helicase HAS1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 615
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 174/515 (33%), Positives = 276/515 (53%), Gaps = 54/515 (10%)
Query: 369 PDIPNV-PTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPIL 427
PD +V P+ P + A +++E G+ K + E M ++T +Q+ I P+L
Sbjct: 112 PDADDVQPSGLSLPEASDATAAQAFDEL-GLSENTMKAIKE-MGFDKMTEIQRRGIPPLL 169
Query: 428 DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFT 487
G DVL ++TGSGKTLA+ IP ++ L+ + K ++G +++ PTRELALQ +
Sbjct: 170 AGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGTGVIVVSPTRELALQIFGVAR 227
Query: 488 KLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLV 547
L + F GG ++E ++ KG+++L+ATPGRLLDH ++T + F + LV
Sbjct: 228 NLMQ-FHSQTYGICIGGANRRAEVEKLSKGVNLLIATPGRLLDHLQNTPFV-FKNLRSLV 285
Query: 548 LDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDA 606
+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT T V+ LA ++L+ P+ ++
Sbjct: 286 IDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQTTKVEDLARVSLRPGPLYLNV 342
Query: 607 ADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMAT 666
+ + ++Q +IV R + L SF+ + + K++VF ++
Sbjct: 343 DEEKQFSTV-------EGVEQGYIVCEADKRFLLLFSFL-------KKMHKKKIIVFFSS 388
Query: 667 QDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
+ Y+ ELL+ + ++ LHG Q +RT F F + + G LICTDVAARGLD+
Sbjct: 389 CNSVKYYAELLNYI---DLQVLDLHGKQKQQKRTNTFFEFCNAERGTLICTDVAARGLDI 445
Query: 727 PLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEI 785
P VDWIVQ+ P DY+HRVGRTAR +GSSL+FL+PSEV + L+ R+ + E
Sbjct: 446 PAVDWIVQFDPPDDPRDYIHRVGRTARGSSKKGSSLMFLLPSEVGFLTYLKQARVPVVEF 505
Query: 786 KLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR 845
+ + +Q E + + LH SA G+ S++
Sbjct: 506 EFP-----------------------TKHVSNVQSQLEKLIGKNFYLHQSAKDGFRSYLH 542
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
YAS+S LR +F+ ++ L AKSF P V
Sbjct: 543 AYASHS--LRSVFDINKLDLAKVAKSFGFATPPRV 575
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 128/221 (57%), Gaps = 23/221 (10%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 152 MGFDKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGTGV 209
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L + F GG ++E ++ KG+++L+ATPGRLL
Sbjct: 210 IVVSPTRELALQIFGVARNLMQ-FHSQTYGICIGGANRRAEVEKLSKGVNLLIATPGRLL 268
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT
Sbjct: 269 DHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQTTK 324
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E +FS VE + ++ EAD+
Sbjct: 325 VEDLARVSLRPGPLYLNVDEEKQFSTVEGVEQGYIVCEADK 365
>gi|367055746|ref|XP_003658251.1| hypothetical protein THITE_2124801 [Thielavia terrestris NRRL 8126]
gi|347005517|gb|AEO71915.1| hypothetical protein THITE_2124801 [Thielavia terrestris NRRL 8126]
Length = 594
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 260/474 (54%), Gaps = 52/474 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G A
Sbjct: 138 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKP--RNGTGA 195
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 196 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEADKLGKGVNLLIATPGRLL 254
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 255 DHLQNTPFV-FKNLRSLIIDEADRILEIGFEDEMRQIVKILPKE--NRQTMLFSATQTTK 311
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ + D L Q ++V R + L SF+
Sbjct: 312 VEDLARISLRPGPLYINVDEEKKFSTV-------DGLDQGYVVVEADKRFLLLFSFLKKM 364
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ + Y++ELL + ++ LHG Q +RT F F +
Sbjct: 365 AKK-------KIIVFFSSCNSVKYYSELLQYI---DLPVLDLHGKQKQQKRTNTFFEFCN 414
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL PS
Sbjct: 415 AKQGTLICTDVAARGLDIPQVDWIVQFDPPDDPRDYIHRVGRTARGNNSKGRSLLFLQPS 474
Query: 768 EVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ ++ + E K+ + N +Q E +
Sbjct: 475 ELGFLAHLKAAKVPVVEYDFPKNKILN------------------------VQSHLEKLI 510
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+ SA GY S++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 511 GTNYYLNQSAKDGYRSYLHAYASHS--LRSVFDIHKLDLVKVAKSFGFATPPRV 562
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G A
Sbjct: 138 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLRFKP--RNGTGA 195
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 196 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEADKLGKGVNLLIATPGRLL 254
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 255 DHLQNTPFV-FKNLRSLIIDEADRILEIGFEDEMRQIVKILPKE--NRQTMLFSATQTTK 311
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E KFS V+ LDQGY
Sbjct: 312 VEDLARISLRPGPLYINVDEEKKFSTVDG---------LDQGY 345
>gi|270001921|gb|EEZ98368.1| hypothetical protein TcasGA2_TC000825 [Tribolium castaneum]
Length = 629
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 263/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 148 MGFTTLTEIQARSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 205
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + + GG ++E ++ KGI+ILVATPGRLL
Sbjct: 206 IIISPTRELSMQTFGVLKELMK-YHHHTYGLVMGGTSRQTEAQKLSKGINILVATPGRLL 264
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 265 DHMQNTPDFLFKNLQCLVIDEADRILDIGFEEEMKQIINLLPKRR---QTMLFSATQTKK 321
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L+ PI + D+ T L+Q ++V P + RL+ L +F+
Sbjct: 322 TEALTSLALKKEPIYVGVDDAKSEATVT-------GLEQGYVVCPSEKRLLVLFTFL--- 371
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ +H EL + + ++ +HG Q++RT F F +
Sbjct: 372 ----KKNRKKKVMVFFSSCMSVKFHHELFNYI---DLPVMCIHGKQKQAKRTTTFFQFCN 424
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 425 AESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 484
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++AD +Q+ E+ +
Sbjct: 485 ELGFLRYLKQAKVPLNEF--------------EFSWNKIAD---------IQLQLENLIG 521
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ SA + + ++VR Y S+ L+ IF+ + L SF + P+V
Sbjct: 522 KNYFLNMSAKEAFKAYVRAYDSHH--LKTIFDISTLDLAKVGLSFGFKVPPAV 572
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 148 MGFTTLTEIQARSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGV 205
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + + GG ++E ++ KGI+ILVATPGRLL
Sbjct: 206 IIISPTRELSMQTFGVLKELMK-YHHHTYGLVMGGTSRQTEAQKLSKGINILVATPGRLL 264
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T F ++ LV+DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 265 DHMQNTPDFLFKNLQCLVIDEADRILDIGFEEEMKQIINLLPKRR---QTMLFSATQTKK 321
Query: 181 T 181
T
Sbjct: 322 T 322
>gi|298705993|emb|CBJ29114.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 644
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 275/474 (58%), Gaps = 50/474 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+N T +Q +I P+L G D++ ++TGSGKTLA+ +P+++ L ++ K S ++G
Sbjct: 165 LNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKV--KWSHRNGTAC 222
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWI-VPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
+II PTREL+LQT + + ++ L GG ++E R+ KG+++LV TPGRL
Sbjct: 223 IIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRL 282
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH ++T+ F ++ LV+DEADRIL+QG+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 LDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKER---QTMLFSATQTK 339
Query: 589 AVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++++N P+ + D+ +S V D L+Q ++V P R + L +F+
Sbjct: 340 KVEDLARLSIRNKPVYVGVDDAEQ-----ESTV--DGLEQGYVVCPSDKRFLLLFTFL-- 390
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ + +H+ELL+ + ++ +HG Q +RT F F
Sbjct: 391 -----KKNRKKKIMVFFSSCNSVKFHSELLNYI---DMPVMDIHGRQKQQKRTTSFFQFC 442
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIP 766
+GVL+CTDVAARGLD+P VDWI+Q+ P + +Y+HRVGRTAR +G +LLFL+P
Sbjct: 443 KQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLP 502
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
EV + L+ + ++ E + ++ + +V+ + LSRL + N
Sbjct: 503 EEVGFLRYLRTAKAKLNEYEFP--VKKVANVQSQ--LSRLIEKNY--------------- 543
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+ SA + Y S++ Y+S+S L+ I++ ++ L A++F P V
Sbjct: 544 ----YLNKSAREAYRSYLLAYSSHS--LKDIYDVHELDLQAVARAFGFTVPPRV 591
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N T +Q +I P+L G D++ ++TGSGKTLA+ +P+++ L ++ K S ++G
Sbjct: 165 LNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKV--KWSHRNGTAC 222
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWI-VPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
+II PTREL+LQT + + ++ L GG ++E R+ KG+++LV TPGRL
Sbjct: 223 IIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRL 282
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LDH ++T+ F ++ LV+DEADRIL+QG+E ++ + +++L K++ Q++L SAT T
Sbjct: 283 LDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKER---QTMLFSATQT 338
>gi|449703755|gb|EMD44146.1| ATP-dependent RNA helicase, putative [Entamoeba histolytica KU27]
Length = 546
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 273/491 (55%), Gaps = 49/491 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G
Sbjct: 101 EEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGT 158
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+QT ++ K+ + + + + GG K E+ ++KG SI+VATPGR
Sbjct: 159 GAIIISPTRELAIQTFDVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGR 217
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT +
Sbjct: 218 LLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQS 274
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V +A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 275 EKVDDIANISLKQPVVINVESQSTISTSS-------KLEQGYVLIEAKDRFRLLYTFL-- 325
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+++ K +VFM++ ++++LL+ + +I LHG + Q +RT+VF F
Sbjct: 326 -----RKNKNKKTIVFMSSCKAVKFYSDLLNYI---DIPVKALHGQLDQDKRTKVFFEFC 377
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
K +LI TD+AARGLD+P VDWI+Q P S DY+HRVGRTAR +G +LLF+ P
Sbjct: 378 KAKEAILITTDIAARGLDIPAVDWIIQVDLPDSPKDYIHRVGRTARADTKGRALLFVQPC 437
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++++E L+ +I + + ++ E +Q E V
Sbjct: 438 EIRILEYLKGEKIPLTQYEVP-----------------------EKKIANIQRELEKLVE 474
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK- 886
+ L+T A GY +++ Y S S L+ +FN + +G A SF L + P V I K
Sbjct: 475 KNYYLNTEAKDGYKAYIMAYNSRS--LKDVFNVNDLDIGGLALSFGLTNPPKVQLNILKA 532
Query: 887 PKNKEELKNKK 897
PK+ + K+
Sbjct: 533 PKSSTRFEKKR 543
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 115/173 (66%), Gaps = 6/173 (3%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G A+II
Sbjct: 106 TKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGTGAIII 163
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+QT ++ K+ + + + + GG K E+ ++KG SI+VATPGRLLDH
Sbjct: 164 SPTRELAIQTFDVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLDHI 222
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT
Sbjct: 223 INTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSAT 272
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT + V +
Sbjct: 224 NTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQSEKVDDI 280
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 281 ANISLKQPVVINVESQSTISTSS-------KLEQGYVLIEAKDRFRLLYTFL-------R 326
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
+++ K +VFM++ ++++LL+
Sbjct: 327 KNKNKKTIVFMSSCKAVKFYSDLLN 351
>gi|67468731|ref|XP_650379.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56466997|gb|EAL44993.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 542
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 273/491 (55%), Gaps = 49/491 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G
Sbjct: 97 EEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGT 154
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+QT ++ K+ + + + + GG K E+ ++KG SI+VATPGR
Sbjct: 155 GAIIISPTRELAIQTFDVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGR 213
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT +
Sbjct: 214 LLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQS 270
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V +A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 271 EKVDDIANISLKQPVVINVESQSTISTSS-------KLEQGYVLIEAKDRFRLLYTFL-- 321
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+++ K +VFM++ ++++LL+ + +I LHG + Q +RT+VF F
Sbjct: 322 -----RKNKNKKTIVFMSSCKAVKFYSDLLNYI---DIPVKALHGQLDQDKRTKVFFEFC 373
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
K +LI TD+AARGLD+P VDWI+Q P S DY+HRVGRTAR +G +LLF+ P
Sbjct: 374 KAKEAILITTDIAARGLDIPAVDWIIQVDLPDSPKDYIHRVGRTARADTKGRALLFVQPC 433
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++++E L+ +I + + ++ E +Q E V
Sbjct: 434 EIRILEYLKGEKIPLTQYEVP-----------------------EKKIANIQRELEKLVE 470
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK- 886
+ L+T A GY +++ Y S S L+ +FN + +G A SF L + P V I K
Sbjct: 471 KNYYLNTEAKDGYKAYIMAYNSRS--LKDVFNVNDLDIGGLALSFGLTNPPKVQLNILKA 528
Query: 887 PKNKEELKNKK 897
PK+ + K+
Sbjct: 529 PKSSTRFEKKR 539
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 115/173 (66%), Gaps = 6/173 (3%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G A+II
Sbjct: 102 TKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGTGAIII 159
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+QT ++ K+ + + + + GG K E+ ++KG SI+VATPGRLLDH
Sbjct: 160 SPTRELAIQTFDVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLDHI 218
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT
Sbjct: 219 INTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSAT 268
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT + V +
Sbjct: 220 NTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQSEKVDDI 276
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 277 ANISLKQPVVINVESQSTISTSS-------KLEQGYVLIEAKDRFRLLYTFL-------R 322
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
+++ K +VFM++ ++++LL+
Sbjct: 323 KNKNKKTIVFMSSCKAVKFYSDLLN 347
>gi|71029630|ref|XP_764458.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68351412|gb|EAN32175.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 529
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 282/512 (55%), Gaps = 53/512 (10%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
E F+ + +F P ++ +L E N T+ T +Q I P+L G DVL +++TGSGKT
Sbjct: 50 EKYFSGMLFSDFELSEPILR-SLTEN-NFTKTTEIQAKCIPPLLQGKDVLGKAKTGSGKT 107
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+ IP+ + L ++ K ++G +II PTREL+LQ E+ ++CK + + G
Sbjct: 108 LAFLIPLAEVLYQV--KFLPRNGTGGLIISPTRELSLQIFEVAREVCKYLPQTL-GLVMG 164
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G K E+ ++ KG++IL+ATPGRLLDH ++T+ + + V+DEADRIL G+E+++
Sbjct: 165 GANRKQEEFKLCKGVNILIATPGRLLDHMQNTKGFVYKNLMVFVIDEADRILQIGFEQEM 224
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
+ +++L K + Q+ L SAT T V+ LA ++L+ P+ ++ + +S +
Sbjct: 225 NQIIKLLPKNR---QTSLFSATHTSNVEDLARLSLKAPVFLEVM-------SNESATV-S 273
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+Q ++V + R + L +F+ ++ + K++VF ++ + +H ELL+ V
Sbjct: 274 GLEQGYVVCEAENRFMLLYTFL-------KKNLDRKVMVFFSSCNSVKFHDELLNYV--- 323
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+I +HG Q+ R + TF G+L+CTDVAARGLD+P VDWIVQY P D
Sbjct: 324 DIPVKSIHGRKKQTNRLTTYYTFCKSNKGILLCTDVAARGLDIPKVDWIVQYDPPDDPKD 383
Query: 744 YVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD 802
Y+HRVGRTAR +G ++LFL+P E+ + L++ + I K E +
Sbjct: 384 YIHRVGRTARGAEGKGKAILFLMPEELGFLHYLKSLNVTIN--------------KYEFN 429
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
L+++A+ +Q+ E + + L+ S+ Y S++ Y S+S L+ IFN
Sbjct: 430 LNKIAN---------VQVQLEKLIEKNFHLNRSSKDAYRSYLHAYMSHS--LKDIFNVHS 478
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELK 894
+ L AK+F P V KP N+ + +
Sbjct: 479 LDLKRVAKAFGFSTPPKVDLNT-KPSNRSKTR 509
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 114/177 (64%), Gaps = 6/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N T+ T +Q I P+L G DVL +++TGSGKTLA+ IP+ + L ++ K ++G +
Sbjct: 75 NFTKTTEIQAKCIPPLLQGKDVLGKAKTGSGKTLAFLIPLAEVLYQV--KFLPRNGTGGL 132
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTREL+LQ E+ ++CK + + GG K E+ ++ KG++IL+ATPGRLLD
Sbjct: 133 IISPTRELSLQIFEVAREVCKYLPQTL-GLVMGGANRKQEEFKLCKGVNILIATPGRLLD 191
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H ++T+ + + V+DEADRIL G+E+++ + +++L K + Q+ L SAT T
Sbjct: 192 HMQNTKGFVYKNLMVFVIDEADRILQIGFEQEMNQIIKLLPKNR---QTSLFSATHT 245
>gi|340960056|gb|EGS21237.1| hypothetical protein CTHT_0030850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 824
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 199/670 (29%), Positives = 312/670 (46%), Gaps = 126/670 (18%)
Query: 330 STKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSL------FQNNPDIPNVPTRRLKPVS 383
S + KI K P K + + S SSL F++ P+ P+ P LKP +
Sbjct: 83 SRQAKIPKTTHDTAKPAPAHPVKTSHITSRLFSSLPAPVTDFEHAPEEPSEP---LKPSN 139
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGK 442
L + G+ + ++L + + T +Q+ +I Q I + D ++++TGSGK
Sbjct: 140 APLSEEAASFHNLGLSRRLAQHLTTKLELKAPTAIQKNTISQLIREDSDAFLQAETGSGK 199
Query: 443 TLAYAIPIIQKLQEM---------RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSF 493
TLAY +PI+ ++ + + K+ R G++A+I+ PTREL Q + K+ +
Sbjct: 200 TLAYLLPIVHRIMSLSLNEDGTPKQTKVHRNSGLFAIILAPTRELCKQIAVVLEKVLRCA 259
Query: 494 TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADR 553
W+V + + GGE KSEKARIRKG++IL+ATPGRL DH +T+TL V LVLDE DR
Sbjct: 260 PWLVCTTVHGGESKKSEKARIRKGVNILIATPGRLADHLDNTKTLNVGTVRWLVLDEGDR 319
Query: 554 ILDQGYERDIAEFLEILKKQKPQFQ----------------SILLSATLTPAVQRLAGMT 597
+++ G+E D+ + ++ K + Q +IL SAT+ VQ+L ++
Sbjct: 320 MMEMGFEEDLRTIVNKIRAGKLEKQNAEGVMLDGILPSRRVTILCSATMKMNVQKLGEIS 379
Query: 598 LQNPIQIDAADS---TDIHNTTDSL-VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
L++ I I A + D +S+ P LKQ I+ P KLRLV L + + K
Sbjct: 380 LEDAIHITATKAELEKDAGLVNESVFAAPAQLKQSSIIVPAKLRLVTLIALL--KSTFAR 437
Query: 654 EDEESKMLVFMATQDMADYHTELL-------------------------------STVLG 682
+ K ++F++ D DYH +LL ++
Sbjct: 438 KGSVMKAIIFISCADSVDYHFDLLKETKPLEQPSSSSPVKPNPHTEHTVAPAAYITSPAN 497
Query: 683 ENIAFFKLHGSMSQSERTEVFKTFRSVKS-GVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
I KLHGS++Q R+ ++F K +L+ TD+A+RGLD+P VD +++Y +
Sbjct: 498 PRIILHKLHGSLAQPVRSATLQSFTKCKDPAILVTTDIASRGLDVPAVDLVIEYDPAFAV 557
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
D+VHR+GRTAR G G ++LFL+P + + I + LQ +
Sbjct: 558 PDHVHRIGRTARAGRPGKAVLFLLPGCEEGYLSILPAATPITPQHYESILQKAFFTSVN- 616
Query: 802 DLSRLADGNVETA-----------ATALQMSFESAVL----------------------- 827
L G + TA A ALQ+ E +L
Sbjct: 617 ----LPSGYINTAEETQKQTWATRAEALQLHLEQRLLNPPPGSEPSAEDDEEDEDVSKSK 672
Query: 828 --------------QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFA 873
++ L SA + + S +R YA++ K+ R F+ Q+HLGH AK+FA
Sbjct: 673 NKKGKAKKAKYQRPKENPLLESARQAFRSHIRAYATHIKEERIYFDITQLHLGHMAKAFA 732
Query: 874 LRDAPSVISG 883
LR+ P I G
Sbjct: 733 LRETPGGIGG 742
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 63/346 (18%)
Query: 7 TTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---------RPKISRKD 56
T +Q+ +I Q I + D ++++TGSGKTLAY +PI+ ++ + + K+ R
Sbjct: 172 TAIQKNTISQLIREDSDAFLQAETGSGKTLAYLLPIVHRIMSLSLNEDGTPKQTKVHRNS 231
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G++A+I+ PTREL Q + K+ + W+V + + GGE KSEKARIRKG++IL+ATP
Sbjct: 232 GLFAIILAPTRELCKQIAVVLEKVLRCAPWLVCTTVHGGESKKSEKARIRKGVNILIATP 291
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK---QKPQFQSILL 173
GRL DH +T+TL V LVLDE DR+++ G+E D+ + ++ +K + ++L
Sbjct: 292 GRLADHLDNTKTLNVGTVRWLVLDEGDRMMEMGFEEDLRTIVNKIRAGKLEKQNAEGVML 351
Query: 174 SATLTP--ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
L T C T + K+ + L++A I E
Sbjct: 352 DGILPSRRVTILCSATMKMNVQKLGEISLEDAIHITATKAE------------------- 392
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
+++ AG+ ++ P LKQ I+ P KLRLV
Sbjct: 393 ----------LEKDAGLVNES-----------------VFAAPAQLKQSSIIVPAKLRLV 425
Query: 292 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKK 337
L + + K + K ++F++ D DYH +LL K +++
Sbjct: 426 TLIALL--KSTFARKGSVMKAIIFISCADSVDYHFDLLKETKPLEQ 469
>gi|308808320|ref|XP_003081470.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
gi|116059933|emb|CAL55992.1| ATP-dependent RNA helicase (ISS), partial [Ostreococcus tauri]
Length = 777
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 270/508 (53%), Gaps = 49/508 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T VQ + P+L G DVL ++TGSGKTLA+ +P + L K ++G
Sbjct: 182 ESMGFTTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFLVPSAELLYHA--KFMPRNGT 239
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + +L + + + GG ++E R+ KG+++LVATPGR
Sbjct: 240 GVMVLSPTRELALQIYNVAQQLMEKHSQ-THGLIIGGANRRAEAERLIKGVNLLVATPGR 298
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T FS ++ V+DEADR+LD G+E ++ +++L K++ Q++L SAT T
Sbjct: 299 LLDHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKER---QTMLFSATQT 355
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++L++PI I DS + + ++Q + V P + R + L +F+
Sbjct: 356 TKVEDLARLSLKSPIYIGVDDSRAVSTAS-------GVEQGYCVVPSEQRFLLLFTFL-- 406
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ + YH ELL+ + +I +HG Q RT F F
Sbjct: 407 -----KKNLKKKIMVFFSSCNSVKYHAELLNYI---DIPVSDIHGKQKQQRRTTTFFEFC 458
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIP 766
+ G+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR +G +LLFLIP
Sbjct: 459 KAERGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGTDGKGRALLFLIP 518
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ ++ L+ ++ + E + ++A+ +Q E V
Sbjct: 519 EELAFLKYLKAAKVPLNEYEFP--------------TKKIAN---------VQSQLEKLV 555
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
+ LHTSA Y +++ Y S++ L+ ++N ++L A SF P V +
Sbjct: 556 EKNYYLHTSARDAYRAYILAYNSHT--LKDVYNVHSLNLVAVASSFGFHKPPKVQLNLDS 613
Query: 887 PKNKEELKNKKMAINKEKSFKQRGNFSK 914
+K K++ +Q+G K
Sbjct: 614 KASKGRTKSRGEGGPGSDYRRQKGTGHK 641
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ + P+L G DVL ++TGSGKTLA+ +P + L K ++G
Sbjct: 184 MGFTTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFLVPSAELLYHA--KFMPRNGTGV 241
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E R+ KG+++LVATPGRLL
Sbjct: 242 MVLSPTRELALQIYNVAQQLMEKHSQ-THGLIIGGANRRAEAERLIKGVNLLVATPGRLL 300
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T FS ++ V+DEADR+LD G+E ++ +++L K++ Q++L SAT T
Sbjct: 301 DHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKER---QTMLFSATQT 355
>gi|367036228|ref|XP_003667396.1| hypothetical protein MYCTH_2313207 [Myceliophthora thermophila ATCC
42464]
gi|347014669|gb|AEO62151.1| hypothetical protein MYCTH_2313207 [Myceliophthora thermophila ATCC
42464]
Length = 589
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 263/474 (55%), Gaps = 52/474 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G A
Sbjct: 133 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGA 190
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K T + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 191 IVVTPTRELALQIFGVARELMKHHTQTY-GVVIGGANRRAEADKLGKGVNLLIATPGRLL 249
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T
Sbjct: 250 DHLQNTPFV-FKNLRSLIIDEADRILEIGFEDEMRQIVKILPKE--DRQTMLFSATQTTK 306
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D ++T + L +Q ++V R + L SF+
Sbjct: 307 VEDLARISLRPGPLYINV-DEEKKYSTVEGL------EQGYVVVEADKRFLLLFSFL--- 356
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + Y++ELL V ++ LHG Q +RT F F +
Sbjct: 357 ----KKMAKKKIIVFFSSCNSVKYYSELLQYV---DLQVLDLHGKQKQQKRTNTFFEFCN 409
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL P
Sbjct: 410 AKQGTLICTDVAARGLDIPQVDWIVQFDPPDDPRDYIHRVGRTARGNNSKGRSLLFLQPC 469
Query: 768 EVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ ++ + E K+ + N +Q E +
Sbjct: 470 ELGFLAHLKAAKVPVVEYDFPKNKILN------------------------VQSQLEKLI 505
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+ SA GY S++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 506 SSNYYLNQSAKDGYRSYIHAYASHS--LRSVFDVHKLDLVKVAKSFGFSTPPRV 557
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 131/221 (59%), Gaps = 22/221 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G A
Sbjct: 133 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGA 190
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K T + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 191 IVVTPTRELALQIFGVARELMKHHTQTY-GVVIGGANRRAEADKLGKGVNLLIATPGRLL 249
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 250 DHLQNTPFV-FKNLRSLIIDEADRILEIGFEDEMRQIVKILPKE--DRQTMLFSATQTTK 306
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E K+S VE L V+ EAD+
Sbjct: 307 VEDLARISLRPGPLYINVDEEKKYSTVEGLEQGYVVVEADK 347
>gi|159467683|ref|XP_001692021.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278748|gb|EDP04511.1| predicted protein [Chlamydomonas reinhardtii]
Length = 598
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 286/581 (49%), Gaps = 77/581 (13%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + T +Q+L + +L G D LV++QTGSGKTL Y +PII LQ +P+ISR +G
Sbjct: 19 ESLGFAAPTPIQKLVLPVLLSGRDALVKAQTGSGKTLCYLLPIINDLQAQQPRISRGEGT 78
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG----GEKMKSEKARIRKGISILVA 523
YA+I+ PTREL++Q + W+ G G + K R+ G+SI +
Sbjct: 79 YAIILAPTRELSIQVGARVCLCVWGWGWVCHGGRLGVGVPGIGRRLSKGRVVLGLSIQHS 138
Query: 524 TPGRLLDHCK-HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK-------- 574
L H H T +++ LVLDEADR+LD G+E + + E+L K +
Sbjct: 139 GKTPLPPHNPPHAHTCA-AELRWLVLDEADRLLDLGFEAKLRQITELLNKGQRCVVRYAR 197
Query: 575 -------PQFQSILLSATLTPAVQRLAGMTLQNPIQ--------------IDAADSTDIH 613
Q +++L+SATL + LA + L++P I AD
Sbjct: 198 MHAGDLAKQRRTVLVSATLHKQLGALAELALRDPAVVGFDVKQTKSGPQLIGGADVGSGP 257
Query: 614 NTTD----------SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVF 663
+ S +P SL+Q ++ P K RL ALA+ + + +K++VF
Sbjct: 258 GGSGATAGGEGEGVSYSLPASLRQTWLEVPAKERLSALAALLKSRTAR-RRPGGTKIVVF 316
Query: 664 MATQDMADYHTELLSTVLGENIA----------FFKLHGSMSQSERTEVFKTFRSVKSGV 713
+++ D ++H LL+ L E +A FKLHG M QS+RTE F F GV
Sbjct: 317 VSSCDGVEFHHHLLAD-LWEAVAGGPLLPRTCRLFKLHGDMPQSQRTETFAGFSKEGDGV 375
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
L+CTDVAARGLD P V I+QY P + +YVHRVGR+AR+G G +++ L+P EV V
Sbjct: 376 LLCTDVAARGLDFPNVTTIIQYDVPGAPAEYVHRVGRSARMGAAGEAVMILMPHEVPYVN 435
Query: 774 ELQNRRIRIEEIKL-------------KDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
L++R + +E + D KM ++ A+G + +A A Q+
Sbjct: 436 LLRSRGVMLEALGWDGLARFMPTPSFDADGGGGGGGGKMSKKMAAAAEG-LGSAGAARQL 494
Query: 821 S------FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
+ +AV + A + S+VR YA++S DL+ +F + +HLGH A +F L
Sbjct: 495 AAQLHRQMSAAVARDPHAAQLASDAFRSYVRAYATHSGDLKRVFAVRNLHLGHVAHAFCL 554
Query: 875 RDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKK 915
+ P+++ G +++ K ++ A + K+ ++K
Sbjct: 555 TETPTLVGSSGSAADRKRRKREQSAAAEADRRKKMKRAARK 595
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 162/359 (45%), Gaps = 77/359 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +Q+L + +L G D LV++QTGSGKTL Y +PII LQ +P+ISR +G YA
Sbjct: 21 LGFAAPTPIQKLVLPVLLSGRDALVKAQTGSGKTLCYLLPIINDLQAQQPRISRGEGTYA 80
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG----GEKMKSEKARIRKGISILVATP 116
+I+ PTREL++Q + W+ G G + K R+ G+SI +
Sbjct: 81 IILAPTRELSIQVGARVCLCVWGWGWVCHGGRLGVGVPGIGRRLSKGRVVLGLSIQHSGK 140
Query: 117 GRLLDHC-KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
L H H T +++ LVLDEADR+LD G+E + + E+L K +
Sbjct: 141 TPLPPHNPPHAHTCA-AELRWLVLDEADRLLDLGFEAKLRQITELLNKGQ---------- 189
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
C ++++++ + D+A+ Q ++VL+S
Sbjct: 190 -----RC------VVRYARM---------------HAGDLAK----------QRRTVLVS 213
Query: 236 ATLTPAVQRLAGMTLQNPIQ--------------IDAADSTDIHNTTD----------SL 271
ATL + LA + L++P I AD + S
Sbjct: 214 ATLHKQLGALAELALRDPAVVGFDVKQTKSGPQLIGGADVGSGPGGSGATAGGEGEGVSY 273
Query: 272 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+P SL+Q ++ P K RL ALA+ + + +K++VF+++ D ++H LL+
Sbjct: 274 SLPASLRQTWLEVPAKERLSALAALLKSRTAR-RRPGGTKIVVFVSSCDGVEFHHHLLA 331
>gi|403365083|gb|EJY82317.1| DEAD/DEAH box RNA helicase, putative [Oxytricha trifallax]
Length = 907
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 283/544 (52%), Gaps = 60/544 (11%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---RPKISRKDGIYAV 470
Q+T +Q+ +I IL +V+++++TGSGKTL Y IP+++ L + KI+R +G Y +
Sbjct: 279 QLTNIQKSAIPVILKERNVILKAETGSGKTLTYLIPLLEYLSNQSLNKEKITRDNGTYCI 338
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I PTREL +Q KL K F ++V +TGGE + EK+++RKG+++++ TPGR L
Sbjct: 339 IFSPTRELCVQIEIELKKLLKLFYYVVAGTITGGENPQKEKSKLRKGMTVIICTPGRFLY 398
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-QFQSIL-------- 581
H +HT ++ S + +L+ DEADRILDQG++R++++ L ++KK+ P +F + L
Sbjct: 399 HLQHTSSINLSHLSYLIFDEADRILDQGFDREMSQCLNVIKKKVPHKFSTPLDSGNFWSD 458
Query: 582 ------LSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV-IPDSLKQHFIVTPP 634
+SATL V+ L ++N ++ +++ D + IP ++Q+F+ P
Sbjct: 459 TLKVNFVSATLNSKVESLGQRLMENYSKV--GFEKNLNEEEDQIAQIPKQIQQYFMEVPT 516
Query: 635 KLRL---------------------VALASFILGKCQNVNEDEESKMLVFMATQDMADYH 673
+ RL L +F+ N+N + K F TQ
Sbjct: 517 QYRLLYLLAFLYAHQDEKVLVFISNCELVNFLYHLVNNLNWNNFGKRDDFYQTQGTEGVE 576
Query: 674 TELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIV 733
E + G +I +KLHG M +ER + F F S +LICTDVA+RGLD V+WI+
Sbjct: 577 EEKAQALCGGHI--YKLHGDMDHNERKKNFFGFDKADSAILICTDVASRGLDFKHVEWIL 634
Query: 734 QYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNR-------RIRIEEIK 786
QY S+ +YV+RVGRTAR+ GSSL F++P E ++ L+N+ + R E IK
Sbjct: 635 QYDLSSNIKEYVNRVGRTARIATTGSSLCFIMPQERGYIKHLKNKHHIELHQKTRFEMIK 694
Query: 787 LKDCLQNLLSVKMEGDLSRLAD----GNVETAATALQMSFESAVLQQKI-LHTSACKGYT 841
+L+ K +L + ++ A L+ V Q + L A
Sbjct: 695 QFQKKIQVLNPKKSMYFKQLKNIEDEDEMQEAIHRLRHLLRYTVEQDGLNLINMAQIAKN 754
Query: 842 SWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPK-NKEELKNKKMAI 900
S R YA ++ D+R IF ++L FA+SFAL + +G P K+E KKM
Sbjct: 755 SSTRAYAGHAHDMRSIFEINNLNLTEFARSFALYKN---LMSVGLPAYGKKEDSKKKMLS 811
Query: 901 NKEK 904
++K
Sbjct: 812 KRDK 815
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 133/217 (61%), Gaps = 4/217 (1%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---RPKISRKDGIYAV 61
Q+T +Q+ +I IL +V+++++TGSGKTL Y IP+++ L + KI+R +G Y +
Sbjct: 279 QLTNIQKSAIPVILKERNVILKAETGSGKTLTYLIPLLEYLSNQSLNKEKITRDNGTYCI 338
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I PTREL +Q KL K F ++V +TGGE + EK+++RKG+++++ TPGR L
Sbjct: 339 IFSPTRELCVQIEIELKKLLKLFYYVVAGTITGGENPQKEKSKLRKGMTVIICTPGRFLY 398
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-QFQSILLSATLTPA 180
H +HT ++ S + +L+ DEADRILDQG++R++++ L ++KK+ P +F + L S
Sbjct: 399 HLQHTSSINLSHLSYLIFDEADRILDQGFDREMSQCLNVIKKKVPHKFSTPLDSGNFWSD 458
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 217
T SKVE L + G+E+++ E
Sbjct: 459 TLKVNFVSATLNSKVESLGQRLMENYSKVGFEKNLNE 495
>gi|407044034|gb|EKE42324.1| DEAD/DEAH box helicase, putative, partial [Entamoeba nuttalli P19]
Length = 505
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 273/491 (55%), Gaps = 49/491 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G
Sbjct: 60 EEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGT 117
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+QT ++ K+ + + + + GG K E+ ++KG SI+VATPGR
Sbjct: 118 GAIIISPTRELAIQTFDVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGR 176
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH +T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT +
Sbjct: 177 LLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQS 233
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V +A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 234 EKVDDIANISLKQPVVINVESQSTISTSS-------KLEQGYVLIEAKDRFRLLYTFL-- 284
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+++ K +VFM++ ++++LL+ + +I LHG + Q +RT+VF F
Sbjct: 285 -----RKNKNKKTIVFMSSCKAVKFYSDLLNYI---DIPVKALHGQLDQDKRTKVFFEFC 336
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
K +LI TD+AARGLD+P VDWI+Q P S DY+HRVGRTAR +G +LLF+ P
Sbjct: 337 KAKEAILITTDIAARGLDIPAVDWIIQVDLPDSPKDYIHRVGRTARADTKGRALLFVQPC 396
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++++E L+ +I + + ++ E +Q E V
Sbjct: 397 EIRILEYLKGEKIPLTQYEVP-----------------------EKKIANIQRELEKLVE 433
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK- 886
+ L+T A GY +++ Y S S L+ +FN + +G A SF L + P V I K
Sbjct: 434 KNYYLNTEAKDGYKAYIMAYNSRS--LKDVFNVNDLDIGGLALSFGLTNPPKVQLNILKA 491
Query: 887 PKNKEELKNKK 897
PK+ + K+
Sbjct: 492 PKSSTRFEKKR 502
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 115/173 (66%), Gaps = 6/173 (3%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T++TT+Q SI +L G D++ +++TGSGKTLA+ IPI++ L ++ ++G A+II
Sbjct: 65 TKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEILNKIH--FQTRNGTGAIII 122
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+QT ++ K+ + + + + GG K E+ ++KG SI+VATPGRLLDH
Sbjct: 123 SPTRELAIQTFDVLEKIL-AHSERTRTLIIGGSSKKKEEEALKKGASIVVATPGRLLDHI 181
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT
Sbjct: 182 INTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSAT 231
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
+T+ + ++ LV+DEADRI++ G+E ++ + L L K + Q++L SAT + V +
Sbjct: 183 NTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNR---QTMLFSATQSEKVDDI 239
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P+ I+ + I ++ L+Q +++ K R L +F+
Sbjct: 240 ANISLKQPVVINVESQSTISTSS-------KLEQGYVLIEAKDRFRLLYTFL-------R 285
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
+++ K +VFM++ ++++LL+
Sbjct: 286 KNKNKKTIVFMSSCKAVKFYSDLLN 310
>gi|403223598|dbj|BAM41728.1| DEAD-box family ATP-dependent helicase [Theileria orientalis strain
Shintoku]
Length = 502
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 268/482 (55%), Gaps = 51/482 (10%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
+ T +Q I P+L G DVL +++TGSGKTLA+ IP+ + L ++ K ++G +I
Sbjct: 58 FVKTTEIQAKCIPPLLQGKDVLGKAKTGSGKTLAFLIPLAEVLFQV--KFMPRNGTGGLI 115
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
I PTREL+LQ E+ +CK + + GG K E ++ +G++IL+ATPGRLLDH
Sbjct: 116 ISPTRELSLQIFEVAKDVCKYLPQTL-GLVMGGANRKQEADKLVRGVNILIATPGRLLDH 174
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
++T+ + + V+DEADRIL+ G+E +I + +++L K + Q+ L SAT T V
Sbjct: 175 MQNTKGFIYKNLLVFVIDEADRILEIGFEEEINQIIKMLPKNR---QTSLFSATHTSNVD 231
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA ++L++P+ + A+ DS + L+Q ++V + R + L +F+
Sbjct: 232 DLARLSLKSPVFLQAS-------ADDSATVV-GLEQGYVVCEAENRFMLLFTFL------ 277
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
++ + K++VF ++ + +H ELL+ V +I +HG QS R + +F
Sbjct: 278 -KKNLDKKIMVFFSSCNSVKFHDELLNYV---DIPVKSIHGRKKQSHRLTTYYSFCKATK 333
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVK 770
G L+CTDVAARGLD+P VDWIVQY P DY+HRVGRTAR +G ++LFL+P E+
Sbjct: 334 GFLLCTDVAARGLDIPKVDWIVQYDPPDDPKDYIHRVGRTARGADGKGKAILFLMPEELG 393
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
+ L++ ++I K + +LS++A+ +QM E + +
Sbjct: 394 FLHYLKSMNVKIS--------------KYDFNLSKIAN---------VQMQLEKLIEKNY 430
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNK 890
L++S+ + Y S++ Y S+S L++IFN + L A++F P V KP N+
Sbjct: 431 YLNSSSKQAYRSYLHAYMSHS--LKNIFNVHSLDLKRVARAFGFSVPPKVDLNT-KPSNR 487
Query: 891 EE 892
+
Sbjct: 488 SK 489
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 110/176 (62%), Gaps = 6/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
+ T +Q I P+L G DVL +++TGSGKTLA+ IP+ + L ++ K ++G +I
Sbjct: 58 FVKTTEIQAKCIPPLLQGKDVLGKAKTGSGKTLAFLIPLAEVLFQV--KFMPRNGTGGLI 115
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTREL+LQ E+ +CK + + GG K E ++ +G++IL+ATPGRLLDH
Sbjct: 116 ISPTRELSLQIFEVAKDVCKYLPQTL-GLVMGGANRKQEADKLVRGVNILIATPGRLLDH 174
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++T+ + + V+DEADRIL+ G+E +I + +++L K + Q+ L SAT T
Sbjct: 175 MQNTKGFIYKNLLVFVIDEADRILEIGFEEEINQIIKMLPKNR---QTSLFSATHT 227
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 18/133 (13%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
V+DEADRIL+ G+E +I + +++L K + Q+ L SAT T V LA ++L++P+ +
Sbjct: 189 FVIDEADRILEIGFEEEINQIIKMLPKNR---QTSLFSATHTSNVDDLARLSLKSPVFLQ 245
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
A+ DS + L+Q ++V + R + L +F+ ++ + K++VF +
Sbjct: 246 AS-------ADDSATVV-GLEQGYVVCEAENRFMLLFTFL-------KKNLDKKIMVFFS 290
Query: 318 TQDMADYHTELLS 330
+ + +H ELL+
Sbjct: 291 SCNSVKFHDELLN 303
>gi|66911669|gb|AAH96848.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Danio rerio]
gi|182889788|gb|AAI65637.1| Ddx18 protein [Danio rerio]
Length = 653
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 267/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 179 MGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGV 236
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELA+QT + +L T V ++ + GG +E ++ G++ILVATPGR
Sbjct: 237 IVLSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGR 293
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T F ++ L++DEADRIL+ G+E ++ + +++L K++ QS+L SAT T
Sbjct: 294 LLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKR---QSMLFSATQT 350
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D+ D + L+Q ++V P + R + L +F+
Sbjct: 351 RKVEDLARISLKKEPLYVGVDDNKDTATV-------EGLEQGYVVCPSEKRFLLLFTFL- 402
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ +H ELL+ + ++ +HG Q++RT F F
Sbjct: 403 ------KKNRKKKLMVFFSSCMSVKFHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQF 453
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR + G +LL L
Sbjct: 454 CNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILR 513
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E ++++D +Q +
Sbjct: 514 PEELGFLRFLKQAKVPLSEF--------------EFSWTKISD---------IQSQLDKL 550
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S+VR Y S+S L+ I+N + + L A SF + P V
Sbjct: 551 IEKNYYLHKSAQEAYKSYVRAYDSHS--LKQIYNVETLDLPKVAMSFGFKVPPFV 603
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 179 MGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGV 236
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+++ PTRELA+QT + +L T V ++ + GG +E ++ G++ILVATPGR
Sbjct: 237 IVLSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGR 293
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T F ++ L++DEADRIL+ G+E ++ + +++L K++ QS+L SAT T
Sbjct: 294 LLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKR---QSMLFSATQT 350
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T F ++ L++DEADRIL+ G+E ++ + +++L K++ QS+L SAT T V+
Sbjct: 299 QNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKR---QSMLFSATQTRKVED 355
Query: 245 LAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L + P+ + D+ D + L+Q ++V P + R + L +F+
Sbjct: 356 LARISLKKEPLYVGVDDNKDTATV-------EGLEQGYVVCPSEKRFLLLFTFL------ 402
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ +H ELL+
Sbjct: 403 -KKNRKKKLMVFFSSCMSVKFHYELLN 428
>gi|84997461|ref|XP_953452.1| DEAD-box family ATP-dependent helicase [Theileria annulata strain
Ankara]
gi|65304448|emb|CAI76827.1| DEAD-box family ATP-dependent helicase, putative [Theileria
annulata]
Length = 535
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 285/521 (54%), Gaps = 55/521 (10%)
Query: 383 SEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
+ F+ + + +F P +K L E N + T +Q I P+L G DVL +++TGSGK
Sbjct: 63 GDVYFSDSLFSDFEISEPILKA-LTEN-NFIKTTEIQAKCIPPLLQGKDVLGKAKTGSGK 120
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
TLA+ IP+ + L ++ K ++G +II PTREL+LQ E+ ++CK + +
Sbjct: 121 TLAFLIPMAEVLYQV--KFMPRNGTGGLIISPTRELSLQIFEVGKEICKYLPQTL-GLVM 177
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GG K E+ ++ KG++IL+ATPGRLLDH ++T+ + + V+DEADRIL G+E++
Sbjct: 178 GGANRKQEEFKLVKGVNILIATPGRLLDHMQNTKGFVYKNLMVFVIDEADRILQIGFEQE 237
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIP 622
+ + +++L K + Q+ L SAT T V LA ++L++PI + + + N T S
Sbjct: 238 MNQIIKLLPKNR---QTSLFSATHTSNVDDLARLSLKSPIFLQVSG---MENATVS---- 287
Query: 623 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG 682
L+Q ++V + R + L +F+ ++ + K++VF ++ + +H ELL+ V
Sbjct: 288 -GLEQGYVVCEAENRFMLLYTFL-------KKNLDKKIMVFFSSCNSVKFHDELLNYV-- 337
Query: 683 ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSST 742
+I +HG Q+ R + +F G L+CTDVAARGLD+P VDWIVQY P
Sbjct: 338 -DIPVKCIHGKKKQTNRLTTYYSFCKATKGHLLCTDVAARGLDIPKVDWIVQYDPPDDPK 396
Query: 743 DYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
DY+HRVGRTAR +G ++LFL+P E+ + L++ + I K +
Sbjct: 397 DYIHRVGRTARGAEGKGKAILFLMPEELGFLHYLKSLNVTIN--------------KYDF 442
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
+LS++A+ +Q+ E + + L+ S+ + Y S++ Y S+S L+ IFN
Sbjct: 443 NLSKIAN---------VQIHLEKLIEKNYHLNRSSKEAYRSYLHAYMSHS--LKDIFNVH 491
Query: 862 QIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINK 902
+ L AKSF P V KP N+ K++ + NK
Sbjct: 492 SLDLKRVAKSFGFSTPPKVDLNT-KPSNRT--KSRLLKFNK 529
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 113/177 (63%), Gaps = 6/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N + T +Q I P+L G DVL +++TGSGKTLA+ IP+ + L ++ K ++G +
Sbjct: 89 NFIKTTEIQAKCIPPLLQGKDVLGKAKTGSGKTLAFLIPMAEVLYQV--KFMPRNGTGGL 146
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTREL+LQ E+ ++CK + + GG K E+ ++ KG++IL+ATPGRLLD
Sbjct: 147 IISPTRELSLQIFEVGKEICKYLPQTL-GLVMGGANRKQEEFKLVKGVNILIATPGRLLD 205
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H ++T+ + + V+DEADRIL G+E+++ + +++L K + Q+ L SAT T
Sbjct: 206 HMQNTKGFVYKNLMVFVIDEADRILQIGFEQEMNQIIKLLPKNR---QTSLFSATHT 259
>gi|51010913|ref|NP_001003411.1| ATP-dependent RNA helicase DDX18 [Danio rerio]
gi|49618963|gb|AAT68066.1| myc-regulated DEAD/H box 18 RNA helicase [Danio rerio]
Length = 653
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 267/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 179 MGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGV 236
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELA+QT + +L T V ++ + GG +E ++ G++ILVATPGR
Sbjct: 237 IVLSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGR 293
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T F ++ L++DEADRIL+ G+E ++ + +++L K++ QS+L SAT T
Sbjct: 294 LLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKR---QSMLFSATQT 350
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D+ D + L+Q ++V P + R + L +F+
Sbjct: 351 RKVEDLARISLKKEPLYVGVDDNKDTATV-------EGLEQGYVVCPSEKRFLLLFTFL- 402
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ +H ELL+ + ++ +HG Q++RT F F
Sbjct: 403 ------KKNRKKKLMVFFSSCMSVKFHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQF 453
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR + G +LL L
Sbjct: 454 CNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILR 513
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E ++++D +Q +
Sbjct: 514 PEELGFLRFLKQAKVPLSEF--------------EFSWTKISD---------IQSQLDKL 550
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S+VR Y S+S L+ I+N + + L A SF + P V
Sbjct: 551 IEKNYYLHKSAQEAYKSYVRAYDSHS--LKQIYNVETLDLPKVAMSFGFKVPPFV 603
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I+P+L+G DVL ++TGSGKTLA+ IP I+ + ++ K ++G
Sbjct: 179 MGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGV 236
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+++ PTRELA+QT + +L T V ++ + GG +E ++ G++ILVATPGR
Sbjct: 237 IVLSPTRELAMQTYGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGR 293
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T F ++ L++DEADRIL+ G+E ++ + +++L K++ QS+L SAT T
Sbjct: 294 LLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKR---QSMLFSATQT 350
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T F ++ L++DEADRIL+ G+E ++ + +++L K++ QS+L SAT T V+
Sbjct: 299 QNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKR---QSMLFSATQTRKVED 355
Query: 245 LAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L + P+ + D+ D + L+Q ++V P + R + L +F+
Sbjct: 356 LARISLKKEPLYVGVDDNKDTATV-------EGLEQGYVVCPSEKRFLLLFTFL------ 402
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ +H ELL+
Sbjct: 403 -KKNRKKKLMVFFSSCMSVKFHYELLN 428
>gi|126644825|ref|XP_001388129.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium parvum
Iowa II]
gi|126117357|gb|EAZ51457.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Cryptosporidium
parvum Iowa II]
gi|323509235|dbj|BAJ77510.1| cgd3_3920 [Cryptosporidium parvum]
Length = 519
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 263/483 (54%), Gaps = 56/483 (11%)
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ--EMRP 459
+KK L E M + +T +Q +I IL+G DVL ++TGSGKTLA+ IP L E P
Sbjct: 37 LKKALKE-MGMETMTEIQAKAIPRILNGKDVLGAAKTGSGKTLAFLIPAANLLYNVEFLP 95
Query: 460 KISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGIS 519
+ +G ++I PTREL+LQ E+ +LCK + + GG ++E ++ KG++
Sbjct: 96 R----NGTGVIVISPTRELSLQIYEVCRELCK-YLPQTHGLVMGGANRRTEAEKLSKGVN 150
Query: 520 ILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 579
ILVATPGRLLDH ++T+ F + +LV+DEADRIL+ G+E ++ + +++L K++ Q+
Sbjct: 151 ILVATPGRLLDHLQNTKQFLFKNLLNLVIDEADRILEIGFEEEMNQIIKLLPKER---QT 207
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
L SAT T V L ++L+NP+ +++ + T S+ L+Q +++ R +
Sbjct: 208 SLFSATQTTKVADLVRLSLKNPVLVESKN-------TSSIATVSGLEQGYVIAQANQRFL 260
Query: 640 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSER 699
L +F+ ++ + K++VF ++ +H EL + V ++ +HG Q+ R
Sbjct: 261 LLYTFL-------KKNRDKKVMVFFSSCMSTKFHEELFNYV---DLTCSSIHGKKKQTSR 310
Query: 700 TEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEG 758
+ + F S G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G
Sbjct: 311 MQTYYDFCSADKGLLLCTDVAARGLDIPNVDWIVQYDPPDDPREYIHRVGRTARGAGGTG 370
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATA 817
+LLFL+P E+ ++ L+ I + E K+ + N+ + L RL + N
Sbjct: 371 KALLFLLPEEIAFLQYLKKMNIPLNEYVFGKNKVANV-----QNQLERLIEKNYH----- 420
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
LH SA Y +++ YAS++ L+ FN + L A SF
Sbjct: 421 --------------LHCSARDAYRAYLHSYASHA--LKDAFNVYSLDLQQIAFSFGFSTP 464
Query: 878 PSV 880
P V
Sbjct: 465 PKV 467
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 114/180 (63%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ--EMRPKISRKDGI 58
M + +T +Q +I IL+G DVL ++TGSGKTLA+ IP L E P+ +G
Sbjct: 44 MGMETMTEIQAKAIPRILNGKDVLGAAKTGSGKTLAFLIPAANLLYNVEFLPR----NGT 99
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
++I PTREL+LQ E+ +LCK + + GG ++E ++ KG++ILVATPGR
Sbjct: 100 GVIVISPTRELSLQIYEVCRELCK-YLPQTHGLVMGGANRRTEAEKLSKGVNILVATPGR 158
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T+ F + +LV+DEADRIL+ G+E ++ + +++L K++ Q+ L SAT T
Sbjct: 159 LLDHLQNTKQFLFKNLLNLVIDEADRILEIGFEEEMNQIIKLLPKER---QTSLFSATQT 215
>gi|224613200|gb|ACN60179.1| ATP-dependent RNA helicase DDX18 [Salmo salar]
Length = 470
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 267/472 (56%), Gaps = 58/472 (12%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G VI+ P
Sbjct: 1 MTEIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGVVILSP 58
Query: 475 TRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
TRELA+QT E+ T +F I+ GG +E R+ G++ILVATPGRLLD
Sbjct: 59 TRELAMQTYGVMKELMTHHVHTFGLIM-----GGSNRTAEAQRLANGVNILVATPGRLLD 113
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H ++T + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T V
Sbjct: 114 HLQNTAGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSATQTRKV 170
Query: 591 QRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
+ LA ++L+ P+ + D+ D N T D L+Q ++V P + R + L +F+
Sbjct: 171 EDLARISLKKEPLYVGVDDNKD--NAT-----VDGLEQGYVVCPSEKRFMLLFTFL---- 219
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
++ + K++VF ++ +H ELL+ + ++ +HG Q++RT F F +
Sbjct: 220 ---KKNRKKKLMVFFSSCMSVKFHYELLNYI---DLPVMAIHGKQKQTKRTTTFFQFCNA 273
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSE 768
SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L P E
Sbjct: 274 DSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGVGHALLILRPEE 333
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L+ ++ + E E ++++D +Q E + +
Sbjct: 334 LGFLRFLKQAKVPLSE--------------FEFSWAKISD---------IQGQLEKLIEK 370
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
LH SA + Y S+VR Y S+S L+ I++ ++L A SF + P V
Sbjct: 371 NYYLHKSAQEAYKSYVRAYDSHS--LKAIYSVNTLNLPMVALSFGFKVPPYV 420
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 115/177 (64%), Gaps = 14/177 (7%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI+P+L+G D+L ++TGSGKTLA+ IP I+ + ++ K ++G VI+ P
Sbjct: 1 MTEIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIYKL--KFMPRNGTGVVILSP 58
Query: 66 TRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
TRELA+QT E+ T +F I+ GG +E R+ G++ILVATPGRLLD
Sbjct: 59 TRELAMQTYGVMKELMTHHVHTFGLIM-----GGSNRTAEAQRLANGVNILVATPGRLLD 113
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H ++T + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 114 HLQNTAGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSATQT 167
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 85/147 (57%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT T V+
Sbjct: 116 QNTAGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRR---QTMLFSATQTRKVED 172
Query: 245 LAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L+ P+ + D+ D N T D L+Q ++V P + R + L +F+
Sbjct: 173 LARISLKKEPLYVGVDDNKD--NAT-----VDGLEQGYVVCPSEKRFMLLFTFL------ 219
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ +H ELL+
Sbjct: 220 -KKNRKKKLMVFFSSCMSVKFHYELLN 245
>gi|312084719|ref|XP_003144390.1| ATP-dependent RNA helicase DDX18 [Loa loa]
gi|307760447|gb|EFO19681.1| ATP-dependent RNA helicase DDX18 [Loa loa]
Length = 549
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 262/473 (55%), Gaps = 44/473 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T +Q I+P+L G DVL ++TGSGKTLA+ +P ++ L ++ K ++G
Sbjct: 85 MGFIKMTEIQAKCIEPLLQGRDVLASAKTGSGKTLAFLVPAVELLVKLEWK--PRNGTGV 142
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTREL++QT + +++ + + + GG ++E ++ +G+S LVATPGRLL
Sbjct: 143 IVISPTRELSMQTYGVLSEILEKHPALTHGLIMGGANRQTEAQKLARGVSFLVATPGRLL 202
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ ++ L++DEADRILD G+E ++ + L +L K++ Q++ SAT T
Sbjct: 203 DHLQNTDDFMVKNLKCLIIDEADRILDIGFEIEMQQILRVLPKKR---QTMFFSATQTSK 259
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V L L +P++I + ++ N + L L+Q ++V P + R + L +F+
Sbjct: 260 VDELIKAALHSDPVRI-GINEVNLKNGNE-LATVSGLQQGYVVCPSEKRFLLLFTFL--- 314
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + +I+ +HG Q +RT F +F
Sbjct: 315 ----KRNRDKKVMVFFSSCNSVKYHHELLNYI---DISVQCIHGKQKQQKRTCTFFSFCQ 367
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
KSG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR V G +LL L P
Sbjct: 368 AKSGTLLCTDVAARGLDIPQVDWIVQYDPPDEPREYIHRVGRTARGVTGTGHALLILRPE 427
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L++ ++ + E E S++A+ +Q E +
Sbjct: 428 ELGFLRYLKHAKVVLNE--------------YEFSWSKIAN---------IQSQLEKLIE 464
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA + Y ++R Y S+S L+ IF+ + L +KSF P V
Sbjct: 465 QNYYLNKSAKEAYKCYIRAYDSHS--LKSIFDVNTLDLIAVSKSFGFSTPPFV 515
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 114/178 (64%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q I+P+L G DVL ++TGSGKTLA+ +P ++ L ++ K ++G
Sbjct: 85 MGFIKMTEIQAKCIEPLLQGRDVLASAKTGSGKTLAFLVPAVELLVKLEWK--PRNGTGV 142
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTREL++QT + +++ + + + GG ++E ++ +G+S LVATPGRLL
Sbjct: 143 IVISPTRELSMQTYGVLSEILEKHPALTHGLIMGGANRQTEAQKLARGVSFLVATPGRLL 202
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ ++ L++DEADRILD G+E ++ + L +L K++ Q++ SAT T
Sbjct: 203 DHLQNTDDFMVKNLKCLIIDEADRILDIGFEIEMQQILRVLPKKR---QTMFFSATQT 257
>gi|367006540|ref|XP_003688001.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
gi|357526307|emb|CCE65567.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 263/480 (54%), Gaps = 49/480 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L ++ K ++G
Sbjct: 50 EKMGFENMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKYK--PRNGT 107
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGR
Sbjct: 108 GVIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLVKGVNMLIATPGR 166
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ + ++ L++DEADRIL+ G+E ++ + + IL K+ QS+L SAT T
Sbjct: 167 LLDHLQNTKGFVYKNLKALIIDEADRILEIGFEDEMKQIIRILPKE--DRQSMLFSATQT 224
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA M+L+ P+ I+ D D L+Q ++V R + L SF+
Sbjct: 225 TKVEDLARMSLRKGPLFINVVTDKDTSTA-------DGLEQGYVVCESDKRFLLLFSFL- 276
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 277 ------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 327
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL
Sbjct: 328 CNAERGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 387
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E +++A+ +Q E
Sbjct: 388 PHELGFLRYLKAAKVPLNE--------------YEFPTNKIAN---------VQSQLEKL 424
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ LH A GY S+++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 425 IKSNYHLHQIAKDGYRSYLQAYASHS--LKTVYQIDKLDLTKVAKSYGFPIPPKVNITIG 482
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L ++ K ++G
Sbjct: 52 MGFENMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKYK--PRNGTGV 109
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 110 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLVKGVNMLIATPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEADRIL+ G+E ++ + + IL K+ QS+L SAT T
Sbjct: 169 DHLQNTKGFVYKNLKALIIDEADRILEIGFEDEMKQIIRILPKE--DRQSMLFSATQT 224
>gi|67598831|ref|XP_666241.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium hominis
TU502]
gi|54657199|gb|EAL36013.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium hominis]
Length = 519
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 268/502 (53%), Gaps = 57/502 (11%)
Query: 383 SEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
S F+ +E I +KK L E M + +T +Q +I IL G DVL ++TGSGK
Sbjct: 19 SSGYFSDVKFES-SNICDQLKKALKE-MGMETMTEIQAKAIPRILSGKDVLGAAKTGSGK 76
Query: 443 TLAYAIPIIQKLQ--EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
TLA+ IP L E P+ +G ++I PTREL+LQ E+ +LCK +
Sbjct: 77 TLAFLIPAANLLYNVEFLPR----NGTGVIVISPTRELSLQIYEVCRELCK-YLPQTHGL 131
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
+ GG ++E ++ KG++ILVATPGRLLDH ++T+ F + +LV+DEADRIL+ G+E
Sbjct: 132 VMGGANRRTEAEKLSKGVNILVATPGRLLDHLQNTKQFLFKNLLNLVIDEADRILEIGFE 191
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV 620
++ + +++L K++ Q+ L SAT T V L ++L+NP+ +++ + T S+
Sbjct: 192 EEMNQIIKLLPKER---QTSLFSATQTTKVADLVRLSLKNPVLVESKN-------TSSIA 241
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
L+Q +++ R + L +F+ ++ + K++VF ++ +H EL + V
Sbjct: 242 TVSGLEQGYVIAQANQRFLLLYTFL-------KKNRDKKVMVFFSSCMSTKFHEELFNYV 294
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
++ +HG Q+ R + + F S G+L+CTDVAARGLD+P VDWIVQY P
Sbjct: 295 ---DLTCSSIHGKKKQTSRMQTYYDFCSADKGLLLCTDVAARGLDIPNVDWIVQYDPPDD 351
Query: 741 STDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVK 798
+Y+HRVGRTAR G G +LLFL+P E+ ++ L+ I + E K+ + N+
Sbjct: 352 PREYIHRVGRTARGAGGTGKALLFLLPEEIAFLQYLRKMNIPLNEYVFGKNKVANV---- 407
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
+ L RL + N LH SA Y +++ YAS++ L+ F
Sbjct: 408 -QNQLERLIEKNYH-------------------LHCSARDAYRAYLHSYASHA--LKDAF 445
Query: 859 NFKQIHLGHFAKSFALRDAPSV 880
N + L A SF P V
Sbjct: 446 NVYSLDLQQIAFSFGFSTPPKV 467
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 113/180 (62%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ--EMRPKISRKDGI 58
M + +T +Q +I IL G DVL ++TGSGKTLA+ IP L E P+ +G
Sbjct: 44 MGMETMTEIQAKAIPRILSGKDVLGAAKTGSGKTLAFLIPAANLLYNVEFLPR----NGT 99
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
++I PTREL+LQ E+ +LCK + + GG ++E ++ KG++ILVATPGR
Sbjct: 100 GVIVISPTRELSLQIYEVCRELCK-YLPQTHGLVMGGANRRTEAEKLSKGVNILVATPGR 158
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T+ F + +LV+DEADRIL+ G+E ++ + +++L K++ Q+ L SAT T
Sbjct: 159 LLDHLQNTKQFLFKNLLNLVIDEADRILEIGFEEEMNQIIKLLPKER---QTSLFSATQT 215
>gi|312376077|gb|EFR23272.1| hypothetical protein AND_13185 [Anopheles darlingi]
Length = 621
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 266/477 (55%), Gaps = 52/477 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++R K ++G A
Sbjct: 145 MGFTKMTEIQAKSIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIHKLRFK--PRNGAGA 202
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELA+Q + +L L GG +E ++ KG++I+VATPGRLL
Sbjct: 203 IIISPTRELAMQIFGVLKELMAHHHQTY-GLLMGGASRHTENEKLGKGLNIIVATPGRLL 261
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K T + ++ L++DE DRIL+ G+E D+ + + IL K++ Q++L SAT +
Sbjct: 262 DHLKSTPNFLYKNLQCLIIDECDRILEIGFEEDLKQIISILPKKR---QTLLFSATQSSR 318
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L++ PI + D N T++ V L+Q +IV P + RL+ L +F+
Sbjct: 319 LDELGRLALKSEPIYVGVDD-----NKTEATVT--GLEQGYIVCPSEKRLLVLFTFL--- 368
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ +H EL + + ++ +HG Q++RT VF F +
Sbjct: 369 ----KKNRKKKVMVFFSSCLSVKFHHELFNYI---DLPVQSIHGKQKQAKRTSVFFQFCN 421
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLLFLIP 766
+SG+L+CTDVAARGLD+P VDWIVQY P+ + +Y+HRVGRTAR G G +LL L P
Sbjct: 422 AESGILLCTDVAARGLDIPAVDWIVQYDPPNDTKEYIHRVGRTAR-GENLCGHALLILRP 480
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ ++ L+ ++ + E E S++AD +Q+ E+ +
Sbjct: 481 EELGFLKYLKQAKVPLNE--------------FEFSWSKIAD---------IQLQLENLL 517
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+ L+ S + S+VR Y + ++ +FN + L AK+F P V G
Sbjct: 518 SKNYFLNQSGKLAFKSYVRSYEGHH--MKDVFNIANMDLVQVAKNFGFTQPPYVDFG 572
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 112/176 (63%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q SI P+L+G D++ ++TGSGKTLA+ IP ++ + ++R K ++G A
Sbjct: 145 MGFTKMTEIQAKSIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIHKLRFK--PRNGAGA 202
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA+Q + +L L GG +E ++ KG++I+VATPGRLL
Sbjct: 203 IIISPTRELAMQIFGVLKELMAHHHQTY-GLLMGGASRHTENEKLGKGLNIIVATPGRLL 261
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH K T + ++ L++DE DRIL+ G+E D+ + + IL K++ Q++L SAT
Sbjct: 262 DHLKSTPNFLYKNLQCLIIDECDRILEIGFEEDLKQIISILPKKR---QTLLFSAT 314
>gi|195453216|ref|XP_002073690.1| GK14240 [Drosophila willistoni]
gi|194169775|gb|EDW84676.1| GK14240 [Drosophila willistoni]
Length = 663
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 274/511 (53%), Gaps = 60/511 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q SI P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 190 MGFTEMTEIQSKSITPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 247
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 248 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 306
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L ++ Q++L SAT T
Sbjct: 307 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPTRR---QTMLFSATQTAR 363
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L+ + L+ PI + D N ++ V + L+Q +IV P + RL+ L +F+
Sbjct: 364 IDALSKLALKKEPIYVGVHD-----NEANATV--EGLEQGYIVCPSEKRLLVLFTFL--- 413
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 414 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 466
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 467 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGQSGHALLLMRPE 526
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++ D +Q+ E +
Sbjct: 527 ELGFLRYLKAAKVPLNEF--------------EFSWQKIVD---------IQLQLEKLIA 563
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 564 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAA 621
Query: 888 KNKEELKN---------KKMA-INKEKSFKQ 908
K + K K+M NK++ FKQ
Sbjct: 622 KRQRPEKRMGGGGFGYYKQMNDTNKQRHFKQ 652
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q SI P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 190 MGFTEMTEIQSKSITPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 247
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 248 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 306
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L ++ Q++L SAT T
Sbjct: 307 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPTRR---QTMLFSATQT 361
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 77/140 (55%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L ++ Q++L SAT T + L+ + L+
Sbjct: 317 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPTRR---QTMLFSATQTARIDALSKLALK 373
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
PI + D N ++ V + L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 374 KEPIYVGVHD-----NEANATV--EGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 419
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 420 KVMVFFSSCMSVKYHHELFN 439
>gi|429329903|gb|AFZ81662.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 501
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 273/491 (55%), Gaps = 56/491 (11%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K LNE + T +Q I P+L G DVL +++TGSGKTLA+ IP+ + L ++ K
Sbjct: 50 KALNE-QEFVKTTEIQAKCIPPLLKGKDVLGKAKTGSGKTLAFLIPLAEILFQV--KFMP 106
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTREL+LQ E+ +CK + + GG K E ++ +G++IL+A
Sbjct: 107 RNGTGGIIISPTRELSLQIYEVAKDICKYLPQTL-GLVMGGANRKQEAEKLVRGVNILIA 165
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F + ++DEADRIL+ G+E ++ + +++L +++ Q+ L S
Sbjct: 166 TPGRLLDHMQNTKGFVFKNLLLFIIDEADRILEIGFEEELNQIIKLLPEKR---QTCLFS 222
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT V+ LA ++L++PI ++A+ S D+ L+Q ++V P+ R + L +
Sbjct: 223 ATHGSNVEDLARLSLKSPIFLEASIS-DVATVV-------GLEQGYVVCEPENRFLLLFT 274
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ ++ + K++VF ++ + +H ELL+ + +I +HG QS R +
Sbjct: 275 FL-------KKNMDKKVMVFFSSCNSVKFHDELLNYI---DIPAKSIHGKKKQSARMATY 324
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLL 762
+F SG L+CTDVAARGLD+P VDWIVQY P DY+HRVGRTAR V +G +++
Sbjct: 325 YSFCKATSGHLLCTDVAARGLDIPKVDWIVQYDPPDDPRDYIHRVGRTARGVDGKGKAIM 384
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL+P EV ++ L++ ++ + K + L ++ + +Q+
Sbjct: 385 FLMPEEVGFLQYLKSMKVSLS--------------KYDFTLKKIVN---------VQLQL 421
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-- 880
E + + L+ S+ Y S++ Y S+S L+ IFN + + L AK+F P V
Sbjct: 422 EKLIEKNFYLNRSSRDAYRSYLHAYMSHS--LKDIFNVQSLDLKRIAKAFGFSVPPKVDL 479
Query: 881 ---ISGIGKPK 888
IS GK +
Sbjct: 480 NAKISNRGKKR 490
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 110/174 (63%), Gaps = 6/174 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
+ T +Q I P+L G DVL +++TGSGKTLA+ IP+ + L ++ K ++G +I
Sbjct: 57 FVKTTEIQAKCIPPLLKGKDVLGKAKTGSGKTLAFLIPLAEILFQV--KFMPRNGTGGII 114
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTREL+LQ E+ +CK + + GG K E ++ +G++IL+ATPGRLLDH
Sbjct: 115 ISPTRELSLQIYEVAKDICKYLPQTL-GLVMGGANRKQEAEKLVRGVNILIATPGRLLDH 173
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
++T+ F + ++DEADRIL+ G+E ++ + +++L +++ Q+ L SAT
Sbjct: 174 MQNTKGFVFKNLLLFIIDEADRILEIGFEEELNQIIKLLPEKR---QTCLFSAT 224
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 84/146 (57%), Gaps = 18/146 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T+ F + ++DEADRIL+ G+E ++ + +++L +++ Q+ L SAT V+
Sbjct: 175 QNTKGFVFKNLLLFIIDEADRILEIGFEEELNQIIKLLPEKR---QTCLFSATHGSNVED 231
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
LA ++L++PI ++A+ S D+ L+Q ++V P+ R + L +F+
Sbjct: 232 LARLSLKSPIFLEASIS-DVATVV-------GLEQGYVVCEPENRFLLLFTFL------- 276
Query: 305 NEDEESKMLVFMATQDMADYHTELLS 330
++ + K++VF ++ + +H ELL+
Sbjct: 277 KKNMDKKVMVFFSSCNSVKFHDELLN 302
>gi|195053518|ref|XP_001993673.1| GH20986 [Drosophila grimshawi]
gi|193895543|gb|EDV94409.1| GH20986 [Drosophila grimshawi]
Length = 689
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 276/509 (54%), Gaps = 52/509 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++ ++G
Sbjct: 215 MGFSEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLH--FMPRNGTGV 272
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ +GI+ILVATPGRLL
Sbjct: 273 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGRGINILVATPGRLL 331
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 332 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTDR 388
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L+ + L+ PI + +H++ ++ + D L+Q +IV P + RL+ L +F+
Sbjct: 389 IDALSKLALKKEPIYVG------VHDSQETATV-DGLEQGYIVCPSEKRLLVLFTFL--- 438
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 439 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 491
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 492 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLMLRPE 551
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 552 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 588
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L +KSF P V +G
Sbjct: 589 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVSKSFGFLVPPVVDLKVGAA 646
Query: 888 KNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
K E K++ +KQ + S KQ
Sbjct: 647 --KRERPEKRVGGGGFGYYKQMNDNSSKQ 673
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++ ++G
Sbjct: 215 MGFSEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLH--FMPRNGTGV 272
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ +GI+ILVATPGRLL
Sbjct: 273 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGRGINILVATPGRLL 331
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 332 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT 386
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 80/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T + L+ + L+
Sbjct: 342 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTDRIDALSKLALK 398
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
PI + +H++ ++ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 399 KEPIYV------GVHDSQETATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 444
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 445 KVMVFFSSCMSVKYHHELFN 464
>gi|428178300|gb|EKX47176.1| hypothetical protein GUITHDRAFT_157674 [Guillardia theta CCMP2712]
Length = 560
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 271/480 (56%), Gaps = 61/480 (12%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +T +Q +I P+L G DVL +++TGSGKTLA+ +P I+ L + ++++G A++
Sbjct: 93 FTCMTEIQAKTIAPLLSGRDVLAQAKTGSGKTLAFLLPCIELLH--KGHFAQRNGTGAIV 150
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTRELALQT + + K + GG ++E ++ KG+++L+ATPGRLLDH
Sbjct: 151 LAPTRELALQTYAVARETMKYHNH-THGVVMGGANRRAEAEKLVKGVNLLIATPGRLLDH 209
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
++T+ + ++ L++DEADRIL+QG+E ++ E L++L + QS+L SAT T V+
Sbjct: 210 LQNTKGFIYKNLQVLIIDEADRILEQGFEDEMREILKLLPSNR---QSMLFSATQTSKVE 266
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA ++L+ + S +Q ++V +LR L +F+ +N
Sbjct: 267 DLARLSLRGK------------------PVLSSTQQGYVVVSSELRFRLLYTFL---KKN 305
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
+N+ K+LVF ++ + ++ ELL+ V +I LHG Q +RT F F + +
Sbjct: 306 LNK----KVLVFFSSCNAVKFYAELLNFV---DIPVLDLHGKQKQQKRTTTFFEFCNAEK 358
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVK 770
G+L+CTDVAARGLD+P VDW++Q+ P +Y+HRVGRTAR + +G +LL L+P E++
Sbjct: 359 GILLCTDVAARGLDIPTVDWVIQFDPPDEPKEYIHRVGRTARGINTQGRALLMLLPQELQ 418
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
++ L++ +++ E + ++A+ +Q ES + +
Sbjct: 419 FLKYLRHANVQLTEFEFPP--------------HKIAN---------IQQQLESLIAKNY 455
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG-KPKN 889
L+ SA Y S++ YAS+ L++I++ K + + AKSF + P+V+ G KP +
Sbjct: 456 YLNRSAKDAYRSYILAYASHG--LKNIYDVKSLDMLAVAKSFGFSNPPNVMLNFGVKPSD 513
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 115/176 (65%), Gaps = 6/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T +T +Q +I P+L G DVL +++TGSGKTLA+ +P I+ L + ++++G A++
Sbjct: 93 FTCMTEIQAKTIAPLLSGRDVLAQAKTGSGKTLAFLLPCIELLH--KGHFAQRNGTGAIV 150
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
+ PTRELALQT + + K + GG ++E ++ KG+++L+ATPGRLLDH
Sbjct: 151 LAPTRELALQTYAVARETMKYHNH-THGVVMGGANRRAEAEKLVKGVNLLIATPGRLLDH 209
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++T+ + ++ L++DEADRIL+QG+E ++ E L++L + QS+L SAT T
Sbjct: 210 LQNTKGFIYKNLQVLIIDEADRILEQGFEDEMREILKLLPSNR---QSMLFSATQT 262
>gi|336365891|gb|EGN94240.1| hypothetical protein SERLA73DRAFT_163228 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378572|gb|EGO19730.1| hypothetical protein SERLADRAFT_364022 [Serpula lacrymans var.
lacrymans S7.9]
Length = 561
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 268/492 (54%), Gaps = 55/492 (11%)
Query: 397 GIHPFMKKNLNE-------GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
G PF +L+E M + +T VQ SI P+L G DVL ++TGSGKTLA+ +P
Sbjct: 20 GREPFSNLDLSEPTNKALEDMGFSTMTPVQAKSIPPLLAGKDVLGAARTGSGKTLAFLLP 79
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
++ L + K ++G +I+ PTRELALQ + L + + GG +++
Sbjct: 80 AVELLHRL--KFKPRNGTGIIIVSPTRELALQIFGVAKDLMAHHSQTF-GIVIGGANIRA 136
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
E+ ++ KG+++LVATPGRLLDH ++T F ++ LV+DEADRIL+ G+E ++ + + I
Sbjct: 137 EREKLVKGVNLLVATPGRLLDHLQNTPGFVFRNLKALVIDEADRILEIGFEEEMKKIMTI 196
Query: 570 LKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L QS+L SAT T VQ LA ++L+ P+ ID D T ++ +L Q
Sbjct: 197 LPND--NRQSMLFSATQTTKVQDLARISLRPGPLHID----VDKEEETSTV---STLSQG 247
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
++V P R + L +F+ ++ K++VF ++ + YH ELL+ + ++
Sbjct: 248 YVVCPSDRRFLLLFTFL-------RKNLSKKVIVFFSSCNSVKYHAELLNYI---DVPVL 297
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
LHG Q +RT F F + KSG+L+CTDVAARGLD+P VDWI+Q+ P DY+HRV
Sbjct: 298 DLHGKQKQQKRTNTFFEFINAKSGILLCTDVAARGLDIPRVDWIIQFDPPDDPRDYIHRV 357
Query: 749 GRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD 808
GRTAR G G SLLFL+ SE+ + L+ ++ + E R+A+
Sbjct: 358 GRTARAGKVGKSLLFLLESELGFLRYLKEAKVPLNEFTFPS--------------DRIAN 403
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
+Q E + + LH SA + S+++ YASYS L++I++ + L
Sbjct: 404 ---------VQSQLEKLLQKNYFLHQSARDAFRSYLQSYASYS--LKNIYDINALDLAKV 452
Query: 869 AKSFALRDAPSV 880
+K+F L P V
Sbjct: 453 SKAFGLSVPPRV 464
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + +T VQ SI P+L G DVL ++TGSGKTLA+ +P ++ L + K ++G
Sbjct: 40 MGFSTMTPVQAKSIPPLLAGKDVLGAARTGSGKTLAFLLPAVELLHRL--KFKPRNGTGI 97
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + L + + GG +++E+ ++ KG+++LVATPGRLL
Sbjct: 98 IIVSPTRELALQIFGVAKDLMAHHSQTF-GIVIGGANIRAEREKLVKGVNLLVATPGRLL 156
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + + IL QS+L SAT T
Sbjct: 157 DHLQNTPGFVFRNLKALVIDEADRILEIGFEEEMKKIMTILPND--NRQSMLFSATQT 212
>gi|322712774|gb|EFZ04347.1| ATP-dependent RNA helicase HAS1 [Metarhizium anisopliae ARSEF 23]
Length = 581
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 276/491 (56%), Gaps = 50/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 122 MGFTKMTAIQRTAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSALRFK--PRNGTGV 179
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + + GG K+E ++ KG+++L+ATPGRLL
Sbjct: 180 IVVSPTRELALQIFGVARELMQHHSQTY-GIVIGGANRKAEAEKLSKGVNLLIATPGRLL 238
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +T + F ++ LV+DEADRIL+ G+E +I + +++L Q++L SAT T
Sbjct: 239 DHLLNTPFV-FKNLKSLVIDEADRILEVGFEDEIRQIVKVLSND--DRQTMLFSATQTTK 295
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ + D L+Q +++ R + L SF++
Sbjct: 296 VEDLARISLRPGPLYINVDEEKQFSTV-------DGLEQGYVLCDADKRFILLFSFLMRM 348
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++++ K++VF ++ + Y++ELL+ + + LHG Q +RT F F +
Sbjct: 349 -----KEKKKKVIVFFSSCNSVKYYSELLNYI---DCPVLDLHGKQKQQKRTNTFFEFSN 400
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
+ G+LICTDVAARGLD+P VD+IVQ+ P ++ DY+HRVGRTAR + +G SLLFL P+
Sbjct: 401 AEHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGANTKGRSLLFLQPN 460
Query: 768 EVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
EV + L+ R+ + E + ++N +Q + E +
Sbjct: 461 EVGFLSHLKTARVPVVEFEFPAKHIKN------------------------VQSNLEKLI 496
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
+ L SA + + S++ Y S+S LR +++ +++ L AKSF P V +G+
Sbjct: 497 GKNYYLQQSAKEAFKSYLHAYGSHS--LRSVYDVQKLDLVRVAKSFGFATPPRVDINLGQ 554
Query: 887 PKNKEELKNKK 897
++ +++ ++
Sbjct: 555 SMSRNKVQGRR 565
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 129/221 (58%), Gaps = 22/221 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 122 MGFTKMTAIQRTAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSALRFK--PRNGTGV 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG K+E ++ KG+++L+ATPGRLL
Sbjct: 180 IVVSPTRELALQIFGVARELMQHHSQTY-GIVIGGANRKAEAEKLSKGVNLLIATPGRLL 238
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH +T + F ++ LV+DEADRIL+ G+E +I + +++L Q++L SAT
Sbjct: 239 DHLLNTPFV-FKNLKSLVIDEADRILEVGFEDEIRQIVKVLSND--DRQTMLFSATQTTK 295
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E +FS V+ L VL +AD+
Sbjct: 296 VEDLARISLRPGPLYINVDEEKQFSTVDGLEQGYVLCDADK 336
>gi|399218638|emb|CCF75525.1| unnamed protein product [Babesia microti strain RI]
Length = 522
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 263/506 (51%), Gaps = 55/506 (10%)
Query: 381 PVSEA---LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQ 437
P S+A F+ + P MK + G TQ+T +Q SI +L G DVL ++
Sbjct: 36 PFSDAQKSYFSDLKFTSLDISEPLMKSISDAGF--TQMTPIQAESIPLLLAGKDVLGSAK 93
Query: 438 TGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYA-VIILPTRELALQTLEIFTKLCKSFTW 495
TGSGKTLA+ IP+I L ++ + R I+ VII PTREL+LQ + +LC+
Sbjct: 94 TGSGKTLAFLIPMIDILYKKWYWRSGRFWHIFTLVIISPTRELSLQIFNVGKQLCELLPQ 153
Query: 496 IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRIL 555
+ + GG K E R+ KGI+ILVATPGRLLDH ++T+ F + L +DEADRIL
Sbjct: 154 TI-GLVIGGANRKMEVDRLNKGINILVATPGRLLDHMQNTKGFVFKNLLLLTIDEADRIL 212
Query: 556 DQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT 615
+ G+E D+ +++L K++ Q+ L SAT T VQ LA ++L P+ + D+
Sbjct: 213 EIGFEEDMNNIIKMLPKKR---QTCLFSATNTNKVQDLARLSLNKPVSVKITDT------ 263
Query: 616 TDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 675
L+Q +++ + R + L SF+ ++ K +VF +T + +H E
Sbjct: 264 --PTATVSGLEQGYVICDAEKRFLLLFSFL-------KKNSNKKCMVFFSTCNSVKFHDE 314
Query: 676 LLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
L++ + ++ +HG QS R F +F +SG+L+CTDVAARGLD+P VDWI+QY
Sbjct: 315 LMNYI---DLKTTCIHGKKKQSNRENTFYSFCKSESGILLCTDVAARGLDIPNVDWIIQY 371
Query: 736 TAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL 794
P +Y+HRVGRTAR G +G ++LFL+P E+ ++ L+ + + E
Sbjct: 372 DPPDDPREYIHRVGRTARGAGGKGRAILFLMPEEIDFLQYLKLANVTLNEYSFN------ 425
Query: 795 LSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDL 854
T +Q E + LH S+ + Y S++ Y S+S L
Sbjct: 426 -----------------TTKIANIQTQLERLIETNFYLHKSSREAYKSYLHAYLSHS--L 466
Query: 855 RHIFNFKQIHLGHFAKSFALRDAPSV 880
+ IFN + L A++F P+V
Sbjct: 467 KDIFNVHSLDLQRVARAFGFSVPPTV 492
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYA- 60
TQ+T +Q SI +L G DVL ++TGSGKTLA+ IP+I L ++ + R I+
Sbjct: 68 FTQMTPIQAESIPLLLAGKDVLGSAKTGSGKTLAFLIPMIDILYKKWYWRSGRFWHIFTL 127
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VII PTREL+LQ + +LC+ + + GG K E R+ KGI+ILVATPGRLL
Sbjct: 128 VIISPTRELSLQIFNVGKQLCELLPQTI-GLVIGGANRKMEVDRLNKGINILVATPGRLL 186
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F + L +DEADRIL+ G+E D+ +++L K++ Q+ L SAT T
Sbjct: 187 DHMQNTKGFVFKNLLLLTIDEADRILEIGFEEDMNNIIKMLPKKR---QTCLFSATNT 241
>gi|195390289|ref|XP_002053801.1| GJ23143 [Drosophila virilis]
gi|194151887|gb|EDW67321.1| GJ23143 [Drosophila virilis]
Length = 670
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 275/509 (54%), Gaps = 52/509 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 196 MGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 253
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 254 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 312
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 313 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTER 369
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L+ + L+ PI + +H+ ++ + + L+Q +IV P + RL+ L +F+
Sbjct: 370 IDALSKLALKKEPIYVG------VHDNQETATV-EGLEQGYIVCPSEKRLLVLFTFL--- 419
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 420 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTSTFFQFCN 472
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 473 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLMLRPE 532
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 533 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 569
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L +KSF P V +G
Sbjct: 570 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVSKSFGFLVPPVVDLKVGAA 627
Query: 888 KNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
K E K++ +KQ + KQ
Sbjct: 628 KR--ERPEKRVGGGGFGYYKQMNDSGAKQ 654
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 196 MGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 253
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 254 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 312
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 313 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT 367
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 79/140 (56%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTL- 250
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T + L+ + L
Sbjct: 323 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTERIDALSKLALK 379
Query: 251 QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ ++ + + L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 380 KEPIYV------GVHDNQETATV-EGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 425
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 426 KVMVFFSSCMSVKYHHELFN 445
>gi|328867087|gb|EGG15470.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 637
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 261/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q SI P+L G D+L ++TGSGKTLA+ IP I+ L ++ ++G
Sbjct: 165 MGFKTMTPIQAKSIVPLLQGRDMLGAARTGSGKTLAFLIPAIEVL--VKSNFYPRNGTGV 222
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELALQ + +L + + GG K+E R+ KG+++LVATPGRLL
Sbjct: 223 IIMSPTRELALQIYGVAAELMAHHSQ-THGIIMGGADKKAEAERLVKGVNLLVATPGRLL 281
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T ++ LV+DEADR+L+ G+E ++ + +++L K++ Q++L SAT +
Sbjct: 282 DHLQNTRGFVVKNLKCLVIDEADRMLEVGFEEEMHQIVKLLPKER---QTMLFSATQSNK 338
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V +A ++ + +P+ + D + + L+Q ++V P + R + L +F+
Sbjct: 339 VDAIARVSFRSDPVYVGVDDDRQVSTV-------EGLEQGYVVCPSEKRFLLLYTFL--- 388
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+N+ K++VF ++ + +H ELL+ + +I HG Q+ RT F F +
Sbjct: 389 KKNLNK----KVIVFFSSCNSVKFHAELLNYI---DIPVLAFHGKQKQTLRTNTFYEFVN 441
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CTDVAARG+D+P VDWI+QY P +Y+HRVGRTAR G +G +L+FL+P
Sbjct: 442 AQKGILLCTDVAARGVDIPSVDWIIQYDPPDDPKEYIHRVGRTARGTGKKGRALMFLLPQ 501
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ ++ L+ ++ + E + + + +Q E +
Sbjct: 502 ELGFLKYLKLAKVPLNEYEFP-----------------------QKKVSNVQEQLEKLIS 538
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
LH SA Y S++ YAS+S L+ IF+ + LGH + +F ++ P +
Sbjct: 539 HNFYLHNSARDAYRSYILSYASHS--LKDIFDVNSLQLGHVSIAFGFQNPPKI 589
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 110/176 (62%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI P+L G D+L ++TGSGKTLA+ IP I+ L ++ ++G
Sbjct: 165 MGFKTMTPIQAKSIVPLLQGRDMLGAARTGSGKTLAFLIPAIEVL--VKSNFYPRNGTGV 222
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + + GG K+E R+ KG+++LVATPGRLL
Sbjct: 223 IIMSPTRELALQIYGVAAELMAHHSQ-THGIIMGGADKKAEAERLVKGVNLLVATPGRLL 281
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T ++ LV+DEADR+L+ G+E ++ + +++L K++ Q++L SAT
Sbjct: 282 DHLQNTRGFVVKNLKCLVIDEADRMLEVGFEEEMHQIVKLLPKER---QTMLFSAT 334
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 87/160 (54%), Gaps = 18/160 (11%)
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LL AT ++T ++ LV+DEADR+L+ G+E ++ + +++L K++ Q+
Sbjct: 272 LLVATPGRLLDHLQNTRGFVVKNLKCLVIDEADRMLEVGFEEEMHQIVKLLPKER---QT 328
Query: 232 VLLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 290
+L SAT + V +A ++ + +P+ + D + + L+Q ++V P + R
Sbjct: 329 MLFSATQSNKVDAIARVSFRSDPVYVGVDDDRQVSTV-------EGLEQGYVVCPSEKRF 381
Query: 291 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ L +F+ +N+N+ K++VF ++ + +H ELL+
Sbjct: 382 LLLYTFL---KKNLNK----KVIVFFSSCNSVKFHAELLN 414
>gi|170050080|ref|XP_001859201.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167871660|gb|EDS35043.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 600
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 265/476 (55%), Gaps = 50/476 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q +I P+L G D++ ++TGSGKTLA+ IP ++ + +++ K ++G
Sbjct: 125 MGFTKMTEIQAKAIPPLLAGRDLIGSAKTGSGKTLAFLIPAVELIYKLQFK--PRNGTGV 182
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+Q + +L + L GG +E ++ KG++I+VATPGRLL
Sbjct: 183 LVISPTRELAMQIFGVLKELSAHHHYTY-GLLMGGASRHTENEKLSKGLNIIVATPGRLL 241
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K T F ++ L++DE DRIL+ G+E D+ + + IL K++ Q++L SAT T
Sbjct: 242 DHLKGTPNFLFKNLQCLIIDECDRILEIGFEEDMKQIISILPKKR---QTMLFSATQTSR 298
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ L + L++ PI + D N T++ V L+Q +IV P + RL+ L +F+
Sbjct: 299 TEELGKLALKSEPIYVGVDD-----NKTEATV--SGLEQGYIVCPSEKRLLVLFTFL--- 348
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ +H EL + + ++ +HG Q++RT VF F +
Sbjct: 349 ----KKNRKKKVMVFFSSCLSVKFHHELFNYI---DLPVNSIHGKQKQAKRTSVFFQFCN 401
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P+ + +Y+HRVGRTAR + G +LL L P
Sbjct: 402 AESGILLCTDVAARGLDIPAVDWIVQYDPPNDTKEYIHRVGRTARGDNLCGHALLLLRPE 461
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L+ ++ + E E +++AD +Q+ E+ +
Sbjct: 462 EVAFLKYLKQAKVPLNE--------------FEFSWNKIAD---------IQLQLETLLA 498
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+ L+ S + S+VR Y + ++ +FN + L A++F P V G
Sbjct: 499 KNYFLNQSGKLAFKSYVRAYEGHH--MKDVFNVGNLDLLQVARNFGFTQPPHVDFG 552
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 113/181 (62%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q +I P+L G D++ ++TGSGKTLA+ IP ++ + +++ K ++G
Sbjct: 125 MGFTKMTEIQAKAIPPLLAGRDLIGSAKTGSGKTLAFLIPAVELIYKLQFK--PRNGTGV 182
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+Q + +L + L GG +E ++ KG++I+VATPGRLL
Sbjct: 183 LVISPTRELAMQIFGVLKELSAHHHYTY-GLLMGGASRHTENEKLSKGLNIIVATPGRLL 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T F ++ L++DE DRIL+ G+E D+ + + IL K++ Q++L SAT T
Sbjct: 242 DHLKGTPNFLFKNLQCLIIDECDRILEIGFEEDMKQIISILPKKR---QTMLFSATQTSR 298
Query: 181 T 181
T
Sbjct: 299 T 299
>gi|324508397|gb|ADY43545.1| ATP-dependent RNA helicase pitchoune [Ascaris suum]
Length = 574
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 275/506 (54%), Gaps = 52/506 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M TQ+T +Q I+P+L+G D+L ++TGSGKTLA+ IP ++ L ++ K+ ++G
Sbjct: 111 MGFTQMTKIQAKCIRPLLEGRDILGAAKTGSGKTLAFLIPAVELLVKLEWKV--RNGTGV 168
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTREL++QT + ++L + I + GG ++E ++ KG++ LVATPGRLL
Sbjct: 169 IVISPTRELSMQTYGVLSELLEKHPAITHGLVMGGANRQAEVQKLVKGVNFLVATPGRLL 228
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ ++ L++DEADRILD G+E ++ L IL K++ Q++L SAT T
Sbjct: 229 DHLQNTDDFVVRNLKCLIVDEADRILDIGFEIEMQHILRILPKKR---QTMLFSATQTAK 285
Query: 590 VQRLAGMTLQNP---IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V L L + I ID D+ D D L+Q ++V P + RL+ L +
Sbjct: 286 VNELIKAALHSDPLRIGIDPKDAPD----EDGSATVSGLQQGYVVCPSEKRLLLLFT--- 338
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ ++ K++VF ++ + +H EL + + +I+ +HG Q +RT F +F
Sbjct: 339 ----FLKKNRNKKVMVFFSSCNSVKFHHELFNYI---DISVQCIHGKQKQQKRTCTFFSF 391
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLFL 764
K+G+L CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G EG+ +LL L
Sbjct: 392 CQAKTGILFCTDVAARGLDIPQVDWIVQYDPPDEPREYIHRVGRTAR-GAEGTGHALLLL 450
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
P E+ + L+ R+ + E E +++A+ +Q E
Sbjct: 451 RPEELGFLRYLKQARVVLNE--------------FEFSWNKVAN---------IQPQLEK 487
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI 884
+ Q L+ SA + Y +VR Y S+S L+ IF+ + L AKSFA P V I
Sbjct: 488 LIEQNYYLNKSAKEAYKCYVRAYDSHS--LKSIFDVSTLDLVAVAKSFAFSTPPFVDLPI 545
Query: 885 -GKPKNKEELKNKKMAINKE-KSFKQ 908
KPK K K+ K+FKQ
Sbjct: 546 SNKPKVVMRSKLSGAGYRKKPKAFKQ 571
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 117/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M TQ+T +Q I+P+L+G D+L ++TGSGKTLA+ IP ++ L ++ K+ ++G
Sbjct: 111 MGFTQMTKIQAKCIRPLLEGRDILGAAKTGSGKTLAFLIPAVELLVKLEWKV--RNGTGV 168
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTREL++QT + ++L + I + GG ++E ++ KG++ LVATPGRLL
Sbjct: 169 IVISPTRELSMQTYGVLSELLEKHPAITHGLVMGGANRQAEVQKLVKGVNFLVATPGRLL 228
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ ++ L++DEADRILD G+E ++ L IL K++ Q++L SAT T
Sbjct: 229 DHLQNTDDFVVRNLKCLIVDEADRILDIGFEIEMQHILRILPKKR---QTMLFSATQT 283
>gi|116205599|ref|XP_001228610.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|118572553|sp|Q2GMX1.1|HAS1_CHAGB RecName: Full=ATP-dependent RNA helicase HAS1
gi|88176811|gb|EAQ84279.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 586
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 274/509 (53%), Gaps = 53/509 (10%)
Query: 405 NLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
++NE M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K +
Sbjct: 126 SINE-MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLNSLRFKP--R 182
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
+G +++ PTRELALQ + +L K+ + + GG +++E+ ++ KG+++L+AT
Sbjct: 183 NGTGVIVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANIRAEEDKLGKGVNLLIAT 241
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 584
PGRLLDH + + F ++ L++DEADRIL+ G+E ++ ++IL K+ Q++L SA
Sbjct: 242 PGRLLDHLRRG-SFVFKNLKSLIIDEADRILEVGFEDEMRHIVKILPKE--NRQTMLFSA 298
Query: 585 TLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
T T V+ LA ++L+ P+ I+ + + L Q +++ R + L S
Sbjct: 299 TQTTKVEDLARISLRPGPLYINVDEEKQFSTV-------EGLDQGYVIVDADKRFLLLFS 351
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ + + K++VF+++ + Y++ELL + ++ LHG Q +RT F
Sbjct: 352 FL-------KKMAKKKIIVFLSSCNSVKYYSELLQYI---DLQVLDLHGKQKQQKRTNTF 401
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLL 762
F + K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLL
Sbjct: 402 FEFCNAKQGTLICTDVAARGLDIPQVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLL 461
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL P E+ + L+ ++ + E +L+V Q
Sbjct: 462 FLQPCELGFLAHLKAAKVPVVEYDFPK--NKILNV---------------------QSQL 498
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-- 880
E + L+ SA GY S++ YAS+S LR +F+ +++ + AK F P V
Sbjct: 499 EKLIGSNYYLNQSAKDGYRSYLHAYASHS--LRSVFDVQKLDMVKVAKGFGFSTPPRVDI 556
Query: 881 ISGIGKPKNKEELKNKKMAINKEKSFKQR 909
G G ++K+ + +S QR
Sbjct: 557 TLGAGMSRDKKPQARRAYGSQPRQSGHQR 585
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 130 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLNSLRFKP--RNGTGV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K+ + + GG +++E+ ++ KG+++L+ATPGRLL
Sbjct: 188 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANIRAEEDKLGKGVNLLIATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH + + F ++ L++DEADRIL+ G+E ++ ++IL K+ Q++L SAT
Sbjct: 247 DHLRRG-SFVFKNLKSLIIDEADRILEVGFEDEMRHIVKILPKE--NRQTMLFSATQTTK 303
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E +FS VE LDQGY
Sbjct: 304 VEDLARISLRPGPLYINVDEEKQFSTVEG---------LDQGY 337
>gi|356567698|ref|XP_003552054.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 542
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/491 (34%), Positives = 262/491 (53%), Gaps = 50/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T +Q +I P+L DVL ++TG+GKTLA+ +P ++ L + + + ++G
Sbjct: 95 MGFHRMTQIQAKAIPPLLTRKDVLGAARTGAGKTLAFLVPAVELLYSI--QFTPRNGTGV 152
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V+I PTRELA+QT + +L K + + + GG K E RI KG+++LVATPGRLL
Sbjct: 153 VVICPTRELAIQTHAVAKELLKYHSQTL-GLVIGGSGRKGEAERIVKGVNLLVATPGRLL 211
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + ++ L++DEADRIL+ +E ++ + + IL K++ Q+ L SAT T
Sbjct: 212 DHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIINILPKKR---QTALFSATQTKK 268
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++ Q PI ID D V + L+Q ++V P R V L SF+
Sbjct: 269 VEDLARLSFQATPIYIDVDDGR-------KKVTNEGLQQGYVVVPCAKRFVVLYSFL--- 318
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ + +H +LL + +HG Q RT F F
Sbjct: 319 ----RRYQSKKVMVFFSSCNSVKFHADLLKCT---GLDCLNIHGKQKQHARTTTFFNFCK 371
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 372 AEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPE 431
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E D +LA+ +Q E V
Sbjct: 432 ELQFLHYLKAAKVPVKEYAF--------------DHKKLAN---------VQSQLEKLVA 468
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ A Y S++ Y S+S ++ IFN ++ L A SF + P V I
Sbjct: 469 GIYHLNVMAKDAYRSYILAYNSHS--MKDIFNVHRLDLQAVAASFCFSNPPKVNLNIDSS 526
Query: 888 KNKEELKNKKM 898
+K K +K+
Sbjct: 527 ASKHRKKIRKV 537
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I P+L DVL ++TG+GKTLA+ +P ++ L + + + ++G
Sbjct: 95 MGFHRMTQIQAKAIPPLLTRKDVLGAARTGAGKTLAFLVPAVELLYSI--QFTPRNGTGV 152
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELA+QT + +L K + + + GG K E RI KG+++LVATPGRLL
Sbjct: 153 VVICPTRELAIQTHAVAKELLKYHSQTL-GLVIGGSGRKGEAERIVKGVNLLVATPGRLL 211
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEADRIL+ +E ++ + + IL K++ Q+ L SAT T
Sbjct: 212 DHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIINILPKKR---QTALFSATQT 266
>gi|353227469|emb|CCA77977.1| probable HAS1-helicase associated with Set1p [Piriformospora indica
DSM 11827]
Length = 559
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 270/496 (54%), Gaps = 51/496 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T +Q+ +I +L G DVL ++TGSGKTLA+ IP ++ L R K ++G
Sbjct: 43 EAMGFTTMTEIQEKTIPHLLAGKDVLGAAKTGSGKTLAFLIPSVELL--CRLKFKPRNGT 100
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + +L + + + + GG K+E ++ KG+++L+ATPGR
Sbjct: 101 GIIVVSPTRELALQIFGVAKELMEHHSQTL-GIVMGGANRKAEVDKLVKGVNLLIATPGR 159
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T F + LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 160 LLDHLENTPGFVFKNLRALVIDEADRILEVGFEEEMKKIIKILPNENRQ--SMLFSATQT 217
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V LA ++L+ P I+ + D T +L Q ++V P R + L +F+
Sbjct: 218 TKVADLARISLRPGPTYINVDSAKDTSTVT-------TLSQGYVVCPSDRRFLLLFTFL- 269
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ + YH+ELL+ + ++ LHG Q +RT F F
Sbjct: 270 ------RKNLKKKVVVFFSSCNSVKYHSELLNYI---DVPVMDLHGKQKQQKRTNTFFEF 320
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
+ K G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR G G SLLFL+
Sbjct: 321 CNAKQGILLCTDVAARGLDIPEVDWIVQFDPPDDPRDYIHRVGRTARAGKTGKSLLFLLE 380
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
SE+ + L+ ++ + E N S K+ NV+T E +
Sbjct: 381 SELGFLRYLKEAKVPLNEY-------NFPSEKI---------ANVQT-------QLEKLL 417
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---ISG 883
+ LH SA GY S+++ YASYS L+ IF+ ++ L KSF P V +
Sbjct: 418 QKNYYLHRSATDGYRSYLQAYASYS--LKSIFDVNKLDLVKVGKSFGFTVPPRVNVTVGS 475
Query: 884 IGKPKNKEELKNKKMA 899
G N K ++ A
Sbjct: 476 AGGESNAAHSKKRRRA 491
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q+ +I +L G DVL ++TGSGKTLA+ IP ++ L R K ++G
Sbjct: 45 MGFTTMTEIQEKTIPHLLAGKDVLGAAKTGSGKTLAFLIPSVELL--CRLKFKPRNGTGI 102
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + + GG K+E ++ KG+++L+ATPGRLL
Sbjct: 103 IVVSPTRELALQIFGVAKELMEHHSQTL-GIVMGGANRKAEVDKLVKGVNLLIATPGRLL 161
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F + LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 162 DHLENTPGFVFKNLRALVIDEADRILEVGFEEEMKKIIKILPNENR--QSMLFSATQT 217
>gi|357477695|ref|XP_003609133.1| ATP-dependent RNA helicase has1 [Medicago truncatula]
gi|355510188|gb|AES91330.1| ATP-dependent RNA helicase has1 [Medicago truncatula]
Length = 624
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 273/517 (52%), Gaps = 55/517 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L ++ K +++ G
Sbjct: 114 MGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKL--KFNQRSGTGV 171
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRL 528
VII PTRELA+QT E+ KL K L GG ++E + KGI+I+VATPGRL
Sbjct: 172 VIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPGRL 231
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH ++T+ ++ ++ L++DEADRIL+ +E ++ + +++L K + Q+ L SAT T
Sbjct: 232 LDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNR---QTALFSATQTK 288
Query: 589 AVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++ Q PI ID D V + L Q ++V P R + L SF+
Sbjct: 289 KVEDLARLSFQTTPIYIDVDDGR-------KKVTNEGLLQGYVVVPCAKRFMVLYSFL-- 339
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+ K++VF ++ + +H ++ + + ++ ++G Q RT F F
Sbjct: 340 -----KRHKSKKVMVFFSSCNSVKFHADIFNHI---HLHCSSIYGKQKQQTRTTTFVDFC 391
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLLFLI 765
+ G+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G + G++LLFLI
Sbjct: 392 QAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTAR-GEDGKGNALLFLI 450
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E++ + L+ ++ ++E E +Q E+
Sbjct: 451 PEELQFLRYLKEAKVPVKEYAYD-----------------------EKKVANIQSHLENL 487
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
V + L+ A + Y S++ Y S+S + IF+ +++ + A SF + P+V I
Sbjct: 488 VAENYFLNKMAKEAYKSYILAYNSHSS--KDIFSVQRLDMQAVAASFCFSNPPNVSLNIN 545
Query: 886 KPKNKEELK---NKKMAINKEKSFKQRGNFSKKQMLS 919
K +++ + + N + +R K+Q +S
Sbjct: 546 MSKQRKKTRRVDGSRHGFNPNNPYGKRNADDKRQFVS 582
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 114/179 (63%), Gaps = 6/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I P+L G DVL ++TGSGKTLA+ IP ++ L ++ K +++ G
Sbjct: 114 MGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKL--KFNQRSGTGV 171
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRL 119
VII PTRELA+QT E+ KL K L GG ++E + KGI+I+VATPGRL
Sbjct: 172 VIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPGRL 231
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LDH ++T+ ++ ++ L++DEADRIL+ +E ++ + +++L K + Q+ L SAT T
Sbjct: 232 LDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKNR---QTALFSATQT 287
>gi|392354891|ref|XP_003751882.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Rattus
norvegicus]
Length = 628
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 264/475 (55%), Gaps = 52/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M +T +Q SI+P+L+G D+L ++TGSGKTL + IP+I+ + ++ K ++G
Sbjct: 155 EEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLTFLIPVIELIVKL--KFMPRNGT 212
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L ++ + GG +E ++ GI+I++ATPGR
Sbjct: 213 GVLILSPTRELAMQTFGVLKEL-RTHHVHTYGLIMGGSNRSAEVQKLLNGINIVLATPGR 271
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 272 LLDHMQNTPGFTYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 328
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D+ ++ D L+Q ++V P + R + L +F+
Sbjct: 329 RKVEDLARISLKKEPLYMGVDDNKEVATV-------DGLEQGYVVYPSEKRFLLLFTFL- 380
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ E K++VF + + YH ELL+ + ++ +HG Q++RT F F
Sbjct: 381 -------KNREKKVMVFSSCM-LVKYHYELLNYI---DLPVLAIHGQQKQNKRTTTFFQF 429
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P +DWIVQY P +Y+HRVGRTA+ + G SLL L
Sbjct: 430 CNADSGILLCTDVAARGLDIPEMDWIVQYDPPDDPKEYIHRVGRTAQGLNGRGHSLLILG 489
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ + + + S+++D +Q E
Sbjct: 490 PEELGFLRYLKQSKFPLSQFDF--------------SWSKVSD---------IQSPLEKL 526
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 527 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 579
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI+P+L+G D+L ++TGSGKTL + IP+I+ + ++ K ++G
Sbjct: 157 MGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLTFLIPVIELIVKL--KFMPRNGTGV 214
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L ++ + GG +E ++ GI+I++ATPGRLL
Sbjct: 215 LILSPTRELAMQTFGVLKEL-RTHHVHTYGLIMGGSNRSAEVQKLLNGINIVLATPGRLL 273
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 274 DHMQNTPGFTYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 328
>gi|341904278|gb|EGT60111.1| hypothetical protein CAEBREN_13632 [Caenorhabditis brenneri]
Length = 547
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 264/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ T +T +Q SI P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K GI
Sbjct: 89 LGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGI-- 146
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL++QT + ++L + + + + GG +EK ++ KG+SILVATPGRLL
Sbjct: 147 IIVSPTRELSMQTYGVLSELLEG-SNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLL 205
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P
Sbjct: 206 DHLQNTDNFLVRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSPK 262
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V L + L NP+++ + + ++ V + L+Q +IV P RL+ L +
Sbjct: 263 VDELVKLALHSNPVRVSVNEKAE-----EATV--EGLQQGYIVAPSDKRLLLLFT----- 310
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ +++ K++VF ++ + +H ELL+ + +I +HG Q +RT F F
Sbjct: 311 --FLKKNKTKKVMVFFSSCNSVKFHHELLNYI---DIPCMSIHGKQKQQKRTTTFFQFCQ 365
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +LL L P
Sbjct: 366 AESGILLCTDVAARGLDIPAVDWIVQYDPPDEPREYIHRVGRTARGTNGSGKALLVLRPE 425
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S++A+ +Q E+ +
Sbjct: 426 ELGFLRYLKAAKVTLNE--------------FEFSWSKVAN---------IQSQLENLIS 462
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ SA + Y ++R Y S+S L+ IF+ + L +KSF P V
Sbjct: 463 KNYYLNKSAKEAYKCYLRAYDSHS--LKEIFDVTNMDLTAVSKSFGFSVPPFV 513
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T +Q SI P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K GI
Sbjct: 89 LGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGI-- 146
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL++QT + ++L + + + + GG +EK ++ KG+SILVATPGRLL
Sbjct: 147 IIVSPTRELSMQTYGVLSELLEG-SNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLL 205
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
DH ++T+ ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P
Sbjct: 206 DHLQNTDNFLVRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSP 261
>gi|339251806|ref|XP_003372925.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316968668|gb|EFV52921.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 755
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/485 (34%), Positives = 269/485 (55%), Gaps = 54/485 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I +L+G DV+ ++TGSGKTLA+ +P ++ L ++R ++G
Sbjct: 310 MGFETMTEIQAQTIPSLLEGRDVMGAAKTGSGKTLAFLVPAVELLYKLR--FLPRNGTGC 367
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTREL++QT + +L K + I + GG K E A++ GI ILVATPGRLL
Sbjct: 368 IVISPTRELSMQTYGVLIELLK-YHSITHGLVIGGANRKIEAAKLSTGICILVATPGRLL 426
Query: 530 DHCK----HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
DH + +T + ++ L++DEADRIL+ G+E ++ + + +L KQ+ Q++L SAT
Sbjct: 427 DHLRVSGLNTTEFTYKNLQCLIIDEADRILEIGFELEMQQIIRLLPKQR---QTMLFSAT 483
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T ++ LA + L+ P+ + A +++ T + L+Q + V P + R L +F
Sbjct: 484 QTAKIEDLAKLALKKEPLFVGIA--SNVEQAT-----VEGLRQGYAVCPIENRFSLLYTF 536
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++++ K++VF ++ YH++LL+ + + +HG Q +RT F
Sbjct: 537 L-------RKNKKKKVMVFFSSCASVKYHSDLLNYI---EVPVASIHGKQKQQKRTSTFF 586
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLF 763
+F ++G L+CTDVAARGLD+P VDWIVQY P TDY+HRVGRTAR G +G++LL
Sbjct: 587 SFIKAQAGTLLCTDVAARGLDIPKVDWIVQYDPPDDPTDYIHRVGRTARGEGGQGNALLI 646
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L PSE+K + L+ +I + E +C + ++ ++ L +L NV
Sbjct: 647 LQPSELKFLYYLKQAKIPVLEY---ECSWDKVA-NVQKQLEKLLKSNV------------ 690
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
L SA + + +VR Y S+ L+ IFN + L AKSF AP V G
Sbjct: 691 -------YLFKSAIEAFKGYVRAYDSHQ--LKDIFNVATLDLQAVAKSFGFESAPFVDLG 741
Query: 884 IGKPK 888
IG K
Sbjct: 742 IGGLK 746
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 113/182 (62%), Gaps = 10/182 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I +L+G DV+ ++TGSGKTLA+ +P ++ L ++R ++G
Sbjct: 310 MGFETMTEIQAQTIPSLLEGRDVMGAAKTGSGKTLAFLVPAVELLYKLR--FLPRNGTGC 367
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTREL++QT + +L K + I + GG K E A++ GI ILVATPGRLL
Sbjct: 368 IVISPTRELSMQTYGVLIELLK-YHSITHGLVIGGANRKIEAAKLSTGICILVATPGRLL 426
Query: 121 DHCK----HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH + +T + ++ L++DEADRIL+ G+E ++ + + +L KQ+ Q++L SAT
Sbjct: 427 DHLRVSGLNTTEFTYKNLQCLIIDEADRILEIGFELEMQQIIRLLPKQR---QTMLFSAT 483
Query: 177 LT 178
T
Sbjct: 484 QT 485
>gi|325191253|emb|CCA26039.1| DEAD box helicase putative [Albugo laibachii Nc14]
Length = 563
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 276/500 (55%), Gaps = 53/500 (10%)
Query: 383 SEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
E F+ S+ P P ++ L+E M ++T +Q SI P+L G D++ ++TGSGK
Sbjct: 64 GERYFSSESFHSLPLSEP-TQRALSE-MGFEKMTKIQAKSIAPLLSGHDLIAAAKTGSGK 121
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
TL++ IP I+ L ++ + + G +II PTRELALQ + LC+ + +
Sbjct: 122 TLSFLIPTIELLHKV--NFNPRRGAGCIIISPTRELALQIYGVVRDLCRYHSQ-THGIIM 178
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GG +E R+ KG++ILV+TPGRLLDH ++T+ ++ LV+DEADRIL G+E +
Sbjct: 179 GGANRGAEAERLSKGVNILVSTPGRLLDHLQNTKGFLVHNLQILVIDEADRILSIGFEEE 238
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVI 621
+ + ++ + K++ Q++L SAT T VQ LA +++ + PI + D N T S
Sbjct: 239 MRQIIKCIPKER---QTMLFSATQTKKVQDLARLSIREKPIYVGIEDEV---NATVS--- 289
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
SL+Q ++VTP R + L +F+ ++ K++VF + ++ ELL+ +
Sbjct: 290 --SLEQGYVVTPSDKRFLLLFTFL-------KKNLSKKVMVFFSACATVKFYGELLNYI- 339
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
+I +HG Q++RT F F + K+G+L+CTDVAARGLD+P VDWI+Q+ P
Sbjct: 340 --DIPVMDIHGKQKQTKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDP 397
Query: 742 TDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKME 800
+Y+HRVGRTAR H G +LL L+P E+ ++ L+ ++ + E E
Sbjct: 398 KEYIHRVGRTARGAHGSGKALLLLLPDELGFLKYLRASKVTLNE--------------YE 443
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
+ +LA NV++ L + + LH SA Y ++ YAS+S L++IF+
Sbjct: 444 FPVKKLA--NVQSQLMKL-------IEKTYYLHKSAKDAYRGYLLAYASHS--LKNIFDV 492
Query: 861 KQIHLGHFAKSFALRDAPSV 880
Q+ L AKSF L P V
Sbjct: 493 SQLDLQALAKSFGLEIPPKV 512
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI P+L G D++ ++TGSGKTL++ IP I+ L ++ + + G
Sbjct: 89 MGFEKMTKIQAKSIAPLLSGHDLIAAAKTGSGKTLSFLIPTIELLHKV--NFNPRRGAGC 146
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + LC+ + + GG +E R+ KG++ILV+TPGRLL
Sbjct: 147 IIISPTRELALQIYGVVRDLCRYHSQ-THGIIMGGANRGAEAERLSKGVNILVSTPGRLL 205
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ ++ LV+DEADRIL G+E ++ + ++ + K++ Q++L SAT T
Sbjct: 206 DHLQNTKGFLVHNLQILVIDEADRILSIGFEEEMRQIIKCIPKER---QTMLFSATQT 260
>gi|17505370|ref|NP_492779.1| Protein B0511.6 [Caenorhabditis elegans]
gi|351018204|emb|CCD62102.1| Protein B0511.6 [Caenorhabditis elegans]
Length = 544
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 265/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+G+ T +T +Q SI P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K + +G
Sbjct: 84 QGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWK--QHNGT 141
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTREL++QT + ++L + + + + GG +EK ++ KG+SILVATPGR
Sbjct: 142 GVIIVSPTRELSMQTYGVLSELLEG-SNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGR 200
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +
Sbjct: 201 LLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHS 257
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
P V L + L NP+++ +H + + + L+Q +IV P RL+ L +
Sbjct: 258 PKVDELVKLALHSNPVRVS------VHEKAEEATV-EGLQQGYIVAPSDKRLLLLFT--- 307
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ +++ K++VF ++ + +H ELL+ + +I +HG Q +RT F F
Sbjct: 308 ----FLKKNKTKKVMVFFSSCNSVKFHHELLNYI---DIPCMSIHGKQKQQKRTTTFFQF 360
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
++G+L+CTDVAARGLD+P VDWIVQY +Y+HRVGRTAR G +LL L
Sbjct: 361 CQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLR 420
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E E S++A+ +Q E+
Sbjct: 421 PEELGFLRYLKAAKVTLNE--------------FEFSWSKVAN---------IQSQLENL 457
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + L+ SA + Y ++R Y S+S L+ IF+ + L +KSF P V
Sbjct: 458 ISKNYYLNKSAKEAYKCYLRAYDSHS--LKDIFDVTNMDLTAVSKSFGFSVPPFV 510
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 118/179 (65%), Gaps = 6/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T +Q SI P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K + +G
Sbjct: 86 LGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWK--QHNGTGV 143
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL++QT + ++L + + + + GG +EK ++ KG+SILVATPGRLL
Sbjct: 144 IIVSPTRELSMQTYGVLSELLEG-SNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLL 202
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
DH ++T+ ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P
Sbjct: 203 DHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSP 258
>gi|340519177|gb|EGR49416.1| predicted protein [Trichoderma reesei QM6a]
Length = 558
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 278/490 (56%), Gaps = 48/490 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 97 MGFTKMTNIQRSAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGV 154
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 155 IVVSPTRELALQIFGVARELMKYHSQTY-GIVIGGANRRAEVEKLTKGVNLLIATPGRLL 213
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +T+ + F ++ L++DEADRIL+ G+E ++ + +++L + Q ++L SAT T
Sbjct: 214 DHLLNTQFV-FKNLKSLIIDEADRILEVGFEDEMRQIVKVLSNEDRQ--TMLFSATQTTK 270
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T D L +Q +++ R + L SF L K
Sbjct: 271 VEDLARISLRPGPLYINV-DQEQQHSTVDGL------EQGYVLCEGDERFLLLFSF-LRK 322
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q ++ K++VF ++ + Y+ ELL+ + + LHG Q +RT F F +
Sbjct: 323 MQA----KKKKVIVFFSSCNSVKYYAELLNYI---DCPVLDLHGKQKQQKRTNTFFEFSN 375
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
G+LICTDVAARGLD+P VD+IVQ+ P ++ DY+HRVGRTAR + +G SLLFL P+
Sbjct: 376 APHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGANGKGRSLLFLQPN 435
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ R+ + E + + +++V Q E +
Sbjct: 436 EVGFLSYLKAARVPVVEFEFPR--KKIINV---------------------QSQLEKLIG 472
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L SA + + S++ YAS+S LR +++ +++ L AKSF P V +G
Sbjct: 473 KNYYLQQSAKEAFKSYLHAYASHS--LRSVYDVQKLDLAKIAKSFGFPTPPRVDITLGAS 530
Query: 888 KNKEELKNKK 897
+++++ ++
Sbjct: 531 MGRDKVQGRR 540
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 142/246 (57%), Gaps = 22/246 (8%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 97 MGFTKMTNIQRSAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGV 154
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 155 IVVSPTRELALQIFGVARELMKYHSQTY-GIVIGGANRRAEVEKLTKGVNLLIATPGRLL 213
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH +T+ + F ++ L++DEADRIL+ G+E ++ + +++L + Q++L SAT
Sbjct: 214 DHLLNTQFV-FKNLKSLIIDEADRILEVGFEDEMRQIVKVLSNEDR--QTMLFSATQTTK 270
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
L P + + + S V+ L E +L +G ER + F L+K + +
Sbjct: 271 VEDLARISLRPGPLYINVDQEQQHSTVDGL---EQGYVLCEGDERFLLLF-SFLRKMQAK 326
Query: 229 FQSVLL 234
+ V++
Sbjct: 327 KKKVIV 332
>gi|341038385|gb|EGS23377.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 556
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 282/511 (55%), Gaps = 62/511 (12%)
Query: 366 QNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMK--KNLNEGMNITQVTTVQQLSI 423
+N D+ +VP L PT+ +EF ++ K K + E M T++T +Q+ +I
Sbjct: 89 ENGTDLEDVPKN-----DNLLPPPTNAQEFSELNLSEKTTKAIAE-MGFTKMTEIQRRAI 142
Query: 424 QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTL 483
P L G DVL ++TGSGKTLA+ IP ++ L +R ++G A+++ PTRELALQ
Sbjct: 143 PPALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLR--FKPRNGTGAIVVTPTRELALQIF 200
Query: 484 EIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ +L K S T+ V + GG ++E ++ KG+++L+ATPGRLLDH ++T + F
Sbjct: 201 GVARELMKYHSQTYGV---VIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQNTPFV-FK 256
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-N 600
++ L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T V+ LA ++L+
Sbjct: 257 NLKSLIIDEADRILEIGFEDEMRQIVKILPKE--DRQTMLFSATQTTKVEDLARISLRPG 314
Query: 601 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKM 660
P+ I+ D ++T + L +Q ++V R + L SF+ + K+
Sbjct: 315 PLYINV-DEEKKYSTVEGL------EQGYVVVEADKRFLLLFSFLKKMAKK-------KI 360
Query: 661 LVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVA 720
+VF ++ + Y++ELL + ++ LHG Q +RT F F + KSG LICTDVA
Sbjct: 361 IVFFSSCNSVKYYSELLQYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKSGTLICTDVA 417
Query: 721 ARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRR 779
ARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL P E+ + L+ +
Sbjct: 418 ARGLDIPQVDWIVQFDPPDDPRDYIHRVGRTARGNNGKGRSLLFLQPCELGFLAHLKAAK 477
Query: 780 IRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKG 839
+ + E +L+V Q E + L+ SA +G
Sbjct: 478 VPVVEYDFPK--NKILNV---------------------QSQLEKLISTNYYLNQSAKEG 514
Query: 840 YTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
Y S++ YAS+S LR +F+ ++ L AK
Sbjct: 515 YRSYIHAYASHS--LRSVFDVHKLDLVKVAK 543
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 134/223 (60%), Gaps = 26/223 (11%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ +I P L G DVL ++TGSGKTLA+ IP ++ L +R ++G A
Sbjct: 129 MGFTKMTEIQRRAIPPALAGKDVLGAAKTGSGKTLAFLIPAVEMLSSLR--FKPRNGTGA 186
Query: 61 VIILPTRELALQTLEIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+++ PTRELALQ + +L K S T+ V + GG ++E ++ KG+++L+ATPGR
Sbjct: 187 IVVTPTRELALQIFGVARELMKYHSQTYGV---VIGGANRRAEAEKLGKGVNLLIATPGR 243
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT-- 176
LLDH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 244 LLDHLQNTPFV-FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKE--DRQTMLFSATQT 300
Query: 177 ----------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E K+S VE L V+ EAD+
Sbjct: 301 TKVEDLARISLRPGPLYINVDEEKKYSTVEGLEQGYVVVEADK 343
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
F ++ L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT T V+ LA ++L+
Sbjct: 255 FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKE--DRQTMLFSATQTTKVEDLARISLR 312
Query: 252 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
P+ I+ D ++T + L+Q ++V R + L SF+ +
Sbjct: 313 PGPLYIN-VDEEKKYSTV------EGLEQGYVVVEADKRFLLLFSFLKKMAK-------K 358
Query: 311 KMLVFMATQDMADYHTELL 329
K++VF ++ + Y++ELL
Sbjct: 359 KIIVFFSSCNSVKYYSELL 377
>gi|198452859|ref|XP_002137552.1| GA26479 [Drosophila pseudoobscura pseudoobscura]
gi|198132109|gb|EDY68110.1| GA26479 [Drosophila pseudoobscura pseudoobscura]
Length = 716
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 267/483 (55%), Gaps = 50/483 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 241 MGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 298
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 299 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 357
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 358 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 414
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ + + D L+Q +IV P + RL+ L +F+
Sbjct: 415 IEALSKLALKSEPIYVG------VHDDEVTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 464
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 465 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 517
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
++G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 518 AETGILLCTDVAARGLDIPQVDWIVQYDPPDDPKEYIHRVGRTARGSGTSGHALLLMRPE 577
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 578 ELGFLRYLKAAKVPLNE--------------FEFSWQKIAD---------IQLQLEKLIA 614
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L +KSF P V +G
Sbjct: 615 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVSKSFGFLVPPVVDLKVGAA 672
Query: 888 KNK 890
K +
Sbjct: 673 KRQ 675
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 241 MGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 298
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 299 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 357
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 358 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT 412
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 80/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 368 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 424
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ + + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 425 SEPIYV------GVHDDEVTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 470
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 471 KVMVFFSSCMSVKYHHELFN 490
>gi|340059746|emb|CCC54141.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma vivax Y486]
Length = 719
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 297/595 (49%), Gaps = 95/595 (15%)
Query: 371 IPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGG 430
+ NV TR S A+ AP + GI+ ++ L E ++T +Q+ SI L G
Sbjct: 151 VSNVCTR-----SAAVRAPFCHP-LIGINTYVVNGLKE-EGFDRMTIIQERSIPYALQGY 203
Query: 431 DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC 490
D+L ++QTGSGKTLA+ +P++ E+ K R + Y++I+ PT+EL +QT + +C
Sbjct: 204 DLLGQAQTGSGKTLAFCVPVLHGSIELVGK--RPNFTYSLILAPTKELCVQTHTVLKGIC 261
Query: 491 KSFTWIVPSW----LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+ V S+ +TGG K+ E+ R+ G+SI+V TPGR+ DH +H S++ +L
Sbjct: 262 QHIPSNVASFSVHLITGGTKITEERQRLSAGVSIVVGTPGRVHDHVQHCAKWDLSRLRYL 321
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQID 605
VLDEADR+L G++R + + L + + Q+ L SAT + +V LA ++L + P+ I
Sbjct: 322 VLDEADRMLADGFQRSLDAIVRHLPRSR---QTFLFSATNSKSVGELARLSLSRTPLFIS 378
Query: 606 A-------------ADSTDIHNTT------------------------------DSLVIP 622
A ST I +TT D+ IP
Sbjct: 379 TNGNAPTTVPLDGEAVSTAISSTTLPPYCSYDDPDSDEGEDTSNKSGSSMDDKSDNEPIP 438
Query: 623 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG 682
+L+Q +TP RL+ L +F+ + SK +VF +T +H +++ +V G
Sbjct: 439 STLRQFCHITPVDQRLICLYTFVKRVART------SKAMVFCSTVASTIFHCQMMGSV-G 491
Query: 683 ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSST 742
+ LHG M +R F+ F K+GVL+CTDVAARGLD+P V+WI+QY P T
Sbjct: 492 FHNEVMMLHGQMKHRQRVSAFQVFNEWKTGVLMCTDVAARGLDIPNVEWILQYDPPLDPT 551
Query: 743 DYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD 802
+Y+HR+GRTAR G+ G++LLFLIP EV V L I++E+ + L
Sbjct: 552 EYIHRIGRTARAGNIGNALLFLIPEEVTFVRYLAKFGIKLEKYPMPPKL----------- 600
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+QM E + I+ SA + + V Y S+ L+ F+ +
Sbjct: 601 -------------PPIQMKLEHVLQLDPIVAKSAVSAFRAHVGAYQSHL--LQQTFSIHR 645
Query: 863 IHLGHFAKSFALRDAPSV--ISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKK 915
+ LG A+ FAL P+V S + K + +K K ++N+ + +R S+K
Sbjct: 646 LDLGGLARGFALSTVPNVSLASASTEAKRQAYIKGKLKSLNRRRLEAKRYYESQK 700
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 165/336 (49%), Gaps = 42/336 (12%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G D+L ++QTGSGKTLA+ +P++ E+ K R + Y++I+
Sbjct: 187 RMTIIQERSIPYALQGYDLLGQAQTGSGKTLAFCVPVLHGSIELVGK--RPNFTYSLILA 244
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSW----LTGGEKMKSEKARIRKGISILVATPGRLL 120
PT+EL +QT + +C+ V S+ +TGG K+ E+ R+ G+SI+V TPGR+
Sbjct: 245 PTKELCVQTHTVLKGICQHIPSNVASFSVHLITGGTKITEERQRLSAGVSIVVGTPGRVH 304
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +H S++ +LVLDEADR+L G++R + + L + + Q+ L SA
Sbjct: 305 DHVQHCAKWDLSRLRYLVLDEADRMLADGFQRSLDAIVRHLPRSR---QTFLFSA----- 356
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T + ++ L L + L+ + + S TL P
Sbjct: 357 ------TNSKSVGELARLSLSRTPLFISTNGNAPTTVPLD-----GEAVSTAISSTTLPP 405
Query: 241 AVQRLAGMTLQNPIQIDAADSTD-----IHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
+ +P + D+++ + + +D+ IP +L+Q +TP RL+ L +
Sbjct: 406 YC------SYDDPDSDEGEDTSNKSGSSMDDKSDNEPIPSTLRQFCHITPVDQRLICLYT 459
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
F+ + SK +VF +T +H +++ +
Sbjct: 460 FVKRVART------SKAMVFCSTVASTIFHCQMMGS 489
>gi|226478852|emb|CAX72921.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Schistosoma japonicum]
Length = 527
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 270/506 (53%), Gaps = 52/506 (10%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+E+ P P K + M T +T +Q I +L+ D++ ++TGSGKTLA+ IP++
Sbjct: 52 FEDLPISEPV--KRAIKVMGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPVV 109
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ + + + ++G A+II PTREL+LQT + T+L + FT + + GG ++E
Sbjct: 110 ELMLSL--GLQPRNGTGAIIISPTRELSLQTYGVLTELIQ-FTNLRIGLIMGGSNRQTEA 166
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+ KG++ILVATPGRLLDH +T+ ++ LV+DEADR+LD G+E ++ + +++L
Sbjct: 167 QNLEKGVTILVATPGRLLDHLTNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLP 226
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ Q++L SATL + LA L+ A + + D+ + L+Q ++V
Sbjct: 227 TVR---QTMLFSATLNEKTKNLANAALK-------ASCVMVGSVPDNEATVEGLEQGYVV 276
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P R L +FI +++ K++VFMA+ ++ ELL+ V + +H
Sbjct: 277 CSPSKRFCLLYTFI-------RKNKSKKIMVFMASCMEVKFYYELLNFV---DTPVLAIH 326
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q++RT F F ++ VL+CTDV ARGLD+P VDWI+QY P + +Y+HRVGRT
Sbjct: 327 GRQKQAKRTSTFLQFIKAEAAVLLCTDVGARGLDIPKVDWILQYDPPDDAKEYIHRVGRT 386
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR G G++LL L P E++ + L+ R+++ E ++ + S++AD
Sbjct: 387 ARAGSTGNALLVLRPHELEFLSILRKARVKVVEYEIAN--------------SKMAD--- 429
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+Q + E V L SA + + VR YAS FN ++ L A++
Sbjct: 430 ------VQPALEKLVTNNYFLSLSAHEAFKGIVRAYAS---SCLSCFNVNELDLAATART 480
Query: 872 FALRDAPSVISGIGKPKNKEELKNKK 897
L P V + KPK E+ +K
Sbjct: 481 CGLSTTPKVDLNV-KPKRTREIPGQK 505
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 115/181 (63%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q I +L+ D++ ++TGSGKTLA+ IP+++ + + + ++G A
Sbjct: 68 MGFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPVVELMLSL--GLQPRNGTGA 125
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+LQT + T+L + FT + + GG ++E + KG++ILVATPGRLL
Sbjct: 126 IIISPTRELSLQTYGVLTELIQ-FTNLRIGLIMGGSNRQTEAQNLEKGVTILVATPGRLL 184
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +T+ ++ LV+DEADR+LD G+E ++ + +++L + Q++L SATL
Sbjct: 185 DHLTNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVR---QTMLFSATLNEK 241
Query: 181 T 181
T
Sbjct: 242 T 242
>gi|393218838|gb|EJD04326.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 540
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 267/491 (54%), Gaps = 50/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T VQ +I P+L G DVL ++TGSGKTLA+ +P ++ L + K ++G
Sbjct: 37 MGFTTMTPVQAKAIPPLLAGKDVLGAARTGSGKTLAFLVPAVELLHRL--KFKPRNGTGI 94
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTRELALQ + +L + + GG K+E ++ KG++++VATPGRLL
Sbjct: 95 IILSPTRELALQIFGVAKELMAYHSQTF-GIVIGGANRKAEAEKLVKGVNLVVATPGRLL 153
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + + IL + QS+L SAT T
Sbjct: 154 DHLENTKGFVFRNLKALVIDEADRILEIGFEEEMKKIISILPNE--NRQSMLFSATQTTK 211
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
VQ LA ++L+ P+ ID D T ++ +L Q ++V P R + L +F+
Sbjct: 212 VQDLARISLRPGPLHID----VDKEEETSTV---STLSQGYVVCPSDRRFLLLFTFL--- 261
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 262 ----KKNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLDLHGKQKQQKRTNTFFEFCN 314
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
SG+L+CTDV ARGLD+P VDWI+Q+ P DY+HRVGRTAR G G SLLFL+ SE
Sbjct: 315 ATSGILLCTDVGARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKAGKSLLFLLESE 374
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L+ ++ + E R+A+ +Q E + +
Sbjct: 375 LGFLRYLKEAKVPLNEFTF--------------PAERIAN---------VQSQLEKLLQK 411
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP--SVISGIGK 886
LH SA GY S+++ YAS+S L+ IF+ + L ++F P ++ G GK
Sbjct: 412 NYFLHQSARDGYRSYLQSYASHS--LKKIFDVNALDLVKVGRAFGFSVPPRVNITVGGGK 469
Query: 887 PKNKEELKNKK 897
NK K +
Sbjct: 470 SGNKSSRKRSR 480
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I P+L G DVL ++TGSGKTLA+ +P ++ L + K ++G
Sbjct: 37 MGFTTMTPVQAKAIPPLLAGKDVLGAARTGSGKTLAFLVPAVELLHRL--KFKPRNGTGI 94
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELALQ + +L + + GG K+E ++ KG++++VATPGRLL
Sbjct: 95 IILSPTRELALQIFGVAKELMAYHSQTF-GIVIGGANRKAEAEKLVKGVNLVVATPGRLL 153
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + + IL + QS+L SAT T
Sbjct: 154 DHLENTKGFVFRNLKALVIDEADRILEIGFEEEMKKIISILPNE--NRQSMLFSATQT 209
>gi|400596806|gb|EJP64562.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 576
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 269/490 (54%), Gaps = 48/490 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T++Q+ +I P++ G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 118 MGFTKMTSIQKSAIPPLMAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGV 175
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K + + GG K+E ++ KG+++++ATPGRLL
Sbjct: 176 IVVSPTRELALQIFGVARELMKHHSQTY-GIVMGGANRKAEAEKLSKGVNLIIATPGRLL 234
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH T + F ++ L++DEADRIL+ G+E +I + +++L Q++L SAT T
Sbjct: 235 DHLLSTPFV-FKNLKSLIIDEADRILEVGFEDEIRQIVKVLAND--DRQTMLFSATQTTK 291
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ + + D L+Q +++ R + L SF+
Sbjct: 292 VEDLARISLRPGPLYINVDEEKEFSTV-------DGLEQGYVLCDADKRFILLFSFLRQM 344
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q ++ K++VF ++ + Y+ ELL+ + + LHG Q +RT F F +
Sbjct: 345 HQ-----KKKKVIVFFSSCNSVKYYAELLNYI---DCPVLDLHGKQKQQKRTNTFFEFSN 396
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
G+LICTDVAARGLD+P VD+IVQ+ P ++ DY+HRVGRTAR G G SLLFL P+
Sbjct: 397 APCGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGAGKTGRSLLFLQPN 456
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ R+ + E + + +++V Q E +
Sbjct: 457 EVGFLSHLKAARVPVVEFEFP--AKKIINV---------------------QSQLEKLIG 493
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L SA + + S++ YAS+S LR +++ ++ L K F P V +G
Sbjct: 494 KNFYLQQSAKEAFKSYLHAYASHS--LRSVYDVNKLDLAKVGKGFGFPTPPRVDITLGGS 551
Query: 888 KNKEELKNKK 897
++E ++ ++
Sbjct: 552 MSRERVQGRR 561
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 129/221 (58%), Gaps = 22/221 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T++Q+ +I P++ G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 118 MGFTKMTSIQKSAIPPLMAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGV 175
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K + + GG K+E ++ KG+++++ATPGRLL
Sbjct: 176 IVVSPTRELALQIFGVARELMKHHSQTY-GIVMGGANRKAEAEKLSKGVNLIIATPGRLL 234
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH T + F ++ L++DEADRIL+ G+E +I + +++L Q++L SAT
Sbjct: 235 DHLLSTPFV-FKNLKSLIIDEADRILEVGFEDEIRQIVKVLAND--DRQTMLFSATQTTK 291
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E +FS V+ L VL +AD+
Sbjct: 292 VEDLARISLRPGPLYINVDEEKEFSTVDGLEQGYVLCDADK 332
>gi|412992605|emb|CCO18585.1| predicted protein [Bathycoccus prasinos]
Length = 594
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 250/468 (53%), Gaps = 49/468 (10%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T VQ I P+L G DVL ++TGSGKTLA+ IP + L K ++G +++
Sbjct: 121 KMTEVQARCIPPLLAGRDVLGAARTGSGKTLAFLIPCCELL--YHAKFMPRNGCGVMVLS 178
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA+Q + +L + + L GG ++E ++ KG+++LVATPGRLLDH +
Sbjct: 179 PTRELAMQIYSVAQQLMQKHSQ-THGLLMGGANRRAEGEKLIKGVNLLVATPGRLLDHMQ 237
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
+T ++S ++ V+DEADR+LD G+E ++ +++L K + QS+L SAT T V+ L
Sbjct: 238 NTRGFQYSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKDR---QSMLFSATQTTKVEDL 294
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
A ++L+ P+ I DS + + ++Q + V P + R + L +F+
Sbjct: 295 ARLSLKTPLYIGVDDSRAVSTAS-------GVEQGYCVVPSEKRFLLLFTFL-------K 340
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
++ + K++VF ++ + YH ELL+ + +I +HG Q RT F F G+
Sbjct: 341 KNLKKKVMVFFSSCNSVKYHAELLNYI---DIPVSDIHGKQKQQRRTTTFFEFCKADRGI 397
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLV 772
L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G +LLFLIP E+ +
Sbjct: 398 LLCTDVAARGLDIPDVDWIIQYDPPDDPKEYIHRVGRTARGTDGRGRALLFLIPGELGFL 457
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
+ L+N ++ + E + + +Q E V + L
Sbjct: 458 KYLKNAKVPLNEYEFP-----------------------QKKIANVQSQLEKLVEKNYYL 494
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
HTSA Y +++ Y S++ L+ ++N + L SF P V
Sbjct: 495 HTSAKDAYRAYILAYNSHT--LKDVYNVHALDLAAVGLSFGFSRPPKV 540
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 109/174 (62%), Gaps = 6/174 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T VQ I P+L G DVL ++TGSGKTLA+ IP + L K ++G +++
Sbjct: 121 KMTEVQARCIPPLLAGRDVLGAARTGSGKTLAFLIPCCELL--YHAKFMPRNGCGVMVLS 178
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q + +L + + L GG ++E ++ KG+++LVATPGRLLDH +
Sbjct: 179 PTRELAMQIYSVAQQLMQKHSQ-THGLLMGGANRRAEGEKLIKGVNLLVATPGRLLDHMQ 237
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+T ++S ++ V+DEADR+LD G+E ++ +++L K + QS+L SAT T
Sbjct: 238 NTRGFQYSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKDR---QSMLFSATQT 288
>gi|255711788|ref|XP_002552177.1| KLTH0B08998p [Lachancea thermotolerans]
gi|238933555|emb|CAR21739.1| KLTH0B08998p [Lachancea thermotolerans CBS 6340]
Length = 492
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 269/494 (54%), Gaps = 49/494 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 46 MGFTTMTQVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSL--KFKPRNGTGV 103
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + K F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 104 IVITPTRELALQIFGV-AKTLMEFHSQTFGIVIGGANRRQEADKLAKGVNLLIATPGRLL 162
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 163 DHLQNTKDFVFKNLKALVIDEADRILEIGFEDEMRQIVKILPSE--ERQTMLFSATQTTK 220
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ DS +T D L +Q ++V R + L SF+
Sbjct: 221 VEDLARISLRPGPLFINV-DSEKQTSTADGL------EQGYVVCDSDKRFLLLFSFL--- 270
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F +
Sbjct: 271 ----KRNQKKKIIVFLSSCNSVRYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCN 323
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
+ G L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL P+
Sbjct: 324 AERGTLVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSKGKGKSLMFLTPN 383
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E + +++A+ +Q E +
Sbjct: 384 ELGFLRYLKAAKVPLNEYEFPS--------------NKIAN---------VQSQLEKLIK 420
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH A GY S+++ Y+S+S L+ ++ ++ L AKS+ P V IG
Sbjct: 421 SNYHLHQIAKDGYRSYLQAYSSHS--LKTVYQIDKLDLAKVAKSYGFPIPPKVNITIGAS 478
Query: 888 KNKEELKNKKMAIN 901
K +K + N
Sbjct: 479 GKTPPSKKRKPSRN 492
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I P+L G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 46 MGFTTMTQVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSL--KFKPRNGTGV 103
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + K F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 104 IVITPTRELALQIFGV-AKTLMEFHSQTFGIVIGGANRRQEADKLAKGVNLLIATPGRLL 162
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 163 DHLQNTKDFVFKNLKALVIDEADRILEIGFEDEMRQIVKILPSE--ERQTMLFSATQT 218
>gi|336269457|ref|XP_003349489.1| hypothetical protein SMAC_03077 [Sordaria macrospora k-hell]
Length = 791
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 292/578 (50%), Gaps = 94/578 (16%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKL- 454
G+ + ++L + + T +Q+ +I Q I + D ++++TGSGKTLAY +PI+ ++
Sbjct: 146 GLSRRVSQHLATKLEMKAPTAIQKNTIPQLIKEDTDAFLQAETGSGKTLAYLLPIVHRIL 205
Query: 455 -----QEMRPK---ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
++ PK + R G++A+I+ PTREL Q + K+ + W+V + + GGE
Sbjct: 206 ALSHNEDGTPKATKVHRNSGLFAIILAPTRELCKQISVVLEKVLRCAPWLVCTTVIGGES 265
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
KSEKARIRKG++IL+ATPGRL DH +T+ L+ V LVLDE DR+++ G+E DI
Sbjct: 266 KKSEKARIRKGVNILIATPGRLTDHLDNTKVLEVGTVRWLVLDEGDRMMEMGFEDDIKTI 325
Query: 567 LEILKK---QKPQFQSILL-------------SATLTPAVQRLAGMTLQNPIQIDAADST 610
+ ++ QK + ++L SAT+ VQ+L ++L++ + I A+ S
Sbjct: 326 VGKIRAGTLQKKNAEGVVLDGVLPSRRVTVLCSATMKMNVQKLGEISLEDAVHITASKS- 384
Query: 611 DIHNTTDSLVI------PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
D+ ++ + P LKQ I+TP KLRLV L + + K + K ++F+
Sbjct: 385 DMEKDAETGAVETAFSAPAQLKQAAIITPAKLRLVTLIALL--KSTFARKGSVMKAIIFI 442
Query: 665 ATQDMADYHTELLSTVL----------GE-----NIAF-FKLHGSMSQSERTEVFKTFRS 708
+ D DYH ELL + GE NI LHGS++Q RT K F
Sbjct: 443 SCADSVDYHFELLKSTAPRAEPEPKPEGEAPTKPNIHIETTLHGSLAQPVRTATLKAFSE 502
Query: 709 VKS-GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
K VLI TD+++RGLD+P V+ +++Y + D++HR+GRTAR G G ++LFL+P
Sbjct: 503 CKDPAVLITTDISSRGLDVPAVELVIEYDPAFAVPDHMHRIGRTARAGRAGKAVLFLLPG 562
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLS--VKMEGDLSRLADGNVETAAT---ALQMSF 822
+ + + I LQ + + + G S + + + ++ A+ ALQ+ F
Sbjct: 563 SEEGYISILPKSTPIAPQLYDSVLQKGFATTINVPGTESGILETDRQSWASRAEALQLHF 622
Query: 823 ESAVLQ-------------------------------------QKILHTSACKGYTSWVR 845
E +L L SA + + S +R
Sbjct: 623 EQRLLAPLPGATPAFESKSEKFAASKQGKKGKKDAKKDENKTPDNPLLVSARQAFRSHIR 682
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
YA++ ++ R F+ +HLGH AK+F LR+AP I G
Sbjct: 683 AYATHVREERVYFDMTALHLGHMAKAFGLREAPGGIGG 720
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 168/340 (49%), Gaps = 62/340 (18%)
Query: 7 TTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKL------QEMRPK---ISRKD 56
T +Q+ +I Q I + D ++++TGSGKTLAY +PI+ ++ ++ PK + R
Sbjct: 165 TAIQKNTIPQLIKEDTDAFLQAETGSGKTLAYLLPIVHRILALSHNEDGTPKATKVHRNS 224
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G++A+I+ PTREL Q + K+ + W+V + + GGE KSEKARIRKG++IL+ATP
Sbjct: 225 GLFAIILAPTRELCKQISVVLEKVLRCAPWLVCTTVIGGESKKSEKARIRKGVNILIATP 284
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK---QKPQFQSILL 173
GRL DH +T+ L+ V LVLDE DR+++ G+E DI + ++ QK + ++L
Sbjct: 285 GRLTDHLDNTKVLEVGTVRWLVLDEGDRMMEMGFEDDIKTIVGKIRAGTLQKKNAEGVVL 344
Query: 174 SATLTP--ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
L T C T + K+ + L++A I + D+ + E
Sbjct: 345 DGVLPSRRVTVLCSATMKMNVQKLGEISLEDAVHI--TASKSDMEKDAE----------- 391
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
T AV+ P Q+ KQ I+TP KLRLV
Sbjct: 392 -------TGAVE----TAFSAPAQL---------------------KQAAIITPAKLRLV 419
Query: 292 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
L + + K + K ++F++ D DYH ELL +
Sbjct: 420 TLIALL--KSTFARKGSVMKAIIFISCADSVDYHFELLKS 457
>gi|223998424|ref|XP_002288885.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975993|gb|EED94321.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 518
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 259/481 (53%), Gaps = 47/481 (9%)
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
+ +N M T++T +Q +SI +L G D++ ++TGSGKTLA+ +P+++ L K
Sbjct: 30 LTQNALSAMGFTRMTQIQAMSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHN--AKF 87
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI-VPSWLTGGEKMKSEKARIRKGISI 520
++G A++I PTRELA+Q + LC S + GG ++E R+ KG++I
Sbjct: 88 GSRNGTGAIVISPTRELAMQIYGVCKDLCTSGKHHQTYGLIIGGANRRTEAERLAKGVNI 147
Query: 521 LVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSI 580
++ATPGRLLDH ++T+ F + V+DEADRIL+QG+E D+ ++ L KQ+ Q++
Sbjct: 148 VIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRSIIKALPKQR---QTM 204
Query: 581 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 640
L SAT T V+ LA + I +A ++ N T+ L L+Q ++ P R +
Sbjct: 205 LFSATQTKKVEDLA----RTAIDPKSAVYVEVPNETN-LATAAGLEQGYVTVPSDQRFLL 259
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERT 700
L +F+ +++ K++VF ++ + +H+ELL+ + +I +HG Q +RT
Sbjct: 260 LFTFL-------KKNKNKKIMVFFSSCNSVKFHSELLNYI---DIPVMDIHGRQKQQKRT 309
Query: 701 EVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGS 759
F F +G L+CTDVAARGLD+P VDWI+Q+ P +Y+HRVGRTAR +G
Sbjct: 310 TTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGEKGKGR 369
Query: 760 SLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQ 819
+LLFL P E + L+ ++ + E E +++LA+ +Q
Sbjct: 370 ALLFLTPEETGFLRYLKAAKVTLNE--------------YEFPMTKLAN---------VQ 406
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
+ + + L+ +A Y S++ Y S+S LR IF+ + L ++F P
Sbjct: 407 SQLQRLIEKNYYLNCAARDAYRSYLLAYTSHS--LRDIFDVHSLDLAAVGRAFGFTAPPR 464
Query: 880 V 880
V
Sbjct: 465 V 465
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 113/179 (63%), Gaps = 6/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q +SI +L G D++ ++TGSGKTLA+ +P+++ L K ++G A
Sbjct: 38 MGFTRMTQIQAMSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHN--AKFGSRNGTGA 95
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWI-VPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
++I PTRELA+Q + LC S + GG ++E R+ KG++I++ATPGRL
Sbjct: 96 IVISPTRELAMQIYGVCKDLCTSGKHHQTYGLIIGGANRRTEAERLAKGVNIVIATPGRL 155
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LDH ++T+ F + V+DEADRIL+QG+E D+ ++ L KQ+ Q++L SAT T
Sbjct: 156 LDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRSIIKALPKQR---QTMLFSATQT 211
>gi|328709089|ref|XP_003243867.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Acyrthosiphon pisum]
Length = 511
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 259/473 (54%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 41 MGFTVMTEIQAKTIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGC 98
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L K + GG ++E ++ KGI+I+VATPGRLL
Sbjct: 99 IIISPTRELSMQTYGVLKELMKHHHHTY-GLMMGGANRQTEATKLSKGINIVVATPGRLL 157
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DEADRILD G+E +I + + +L K++ Q+++ SAT T
Sbjct: 158 DHLQNSPDFLYKNLQCLIIDEADRILDIGFEEEIKQIINLLPKRR---QTMMFSATKTHK 214
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
L L+ PI I D + + T D L +Q +++ P + R + L +F+
Sbjct: 215 TDALTTFALKKEPIYI-GVDDSKVEATVDGL------EQGYVICPSEKRFLLLFTFL--- 264
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ Y ELL+ + ++ +HG Q RT F F +
Sbjct: 265 ----KKNRKKKVMVFFSSCLAVKYFHELLNYI---DLPVMCIHGKQKQERRTTTFFQFCN 317
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
++G+L+CTDVAARGLD+PLVDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 318 AETGILLCTDVAARGLDIPLVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 377
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ ++ L+ ++ + E ++++D +Q+ E V
Sbjct: 378 ELGFLQYLKKAKVPLNEFDF--------------SWNKISD---------IQLQLEKLVA 414
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + + S+VR Y S+ L+ IF+ + + A SF P+V
Sbjct: 415 KNYFLHISAKEAFKSYVRAYDSHH--LKQIFDVGTLDITKVAASFGFTTPPAV 465
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 116/181 (64%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I P+L+G D++ ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 41 MGFTVMTEIQAKTIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL--KFMPRNGTGC 98
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L K + GG ++E ++ KGI+I+VATPGRLL
Sbjct: 99 IIISPTRELSMQTYGVLKELMKHHHHTY-GLMMGGANRQTEATKLSKGINIVVATPGRLL 157
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DEADRILD G+E +I + + +L K++ Q+++ SAT T
Sbjct: 158 DHLQNSPDFLYKNLQCLIIDEADRILDIGFEEEIKQIINLLPKRR---QTMMFSATKTHK 214
Query: 181 T 181
T
Sbjct: 215 T 215
>gi|146104248|ref|XP_001469774.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|398024292|ref|XP_003865307.1| DEAD box RNA helicase, putative [Leishmania donovani]
gi|134074144|emb|CAM72886.1| putative DEAD box RNA helicase [Leishmania infantum JPCM5]
gi|322503544|emb|CBZ38630.1| DEAD box RNA helicase, putative [Leishmania donovani]
Length = 658
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 267/508 (52%), Gaps = 50/508 (9%)
Query: 376 TRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVR 435
T+R K +++++ A T Y+ ++P + L + ++T +Q I L G D+L
Sbjct: 149 TQRSKELAKSIPAVTDYKSLQ-LNPHIVSALEQEFKFKELTPIQSRCIPAALQGRDLLAE 207
Query: 436 SQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTW 495
++TG+GKTLA+ IPI++ + R +G A+II PTREL LQ + KL K F
Sbjct: 208 AKTGAGKTLAFLIPIVEIV--CRSGFRPSNGTAAIIIGPTRELCLQIEGVLLKLLKHFNG 265
Query: 496 IVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRI 554
+ GG+ E ++ G+ I+VA+PGRLLDH K T + L +DEADR+
Sbjct: 266 SLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLLDHLKLTTDWHTKNLLLLAVDEADRV 325
Query: 555 LDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQIDAADSTDIH 613
LD G+E D+ E + +L K + Q+ L SAT T V++LA ++ + PI I D
Sbjct: 326 LDNGFEEDMREIVALLPKNR---QTFLFSATQTTRVEQLARISFHKTPIFISMKSKKDKA 382
Query: 614 NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYH 673
D+L+Q ++V + RL+ L F V ++ + K++VF ++++ +H
Sbjct: 383 TV-------DTLEQGYVVCASEQRLLVLYHF-------VKKNLKKKVIVFFSSRNSVSFH 428
Query: 674 TELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIV 733
EL + + IAF HG Q +R+ + F + SGVL TDVAARGLD+P VDWIV
Sbjct: 429 CELFNYIDVPCIAF---HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPEVDWIV 485
Query: 734 QYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL-QNRRIRIEEIKLKDCLQ 792
Q+ P YVHRVGRTAR G G++L+FL+P E ++ L + ++++ E
Sbjct: 486 QFDPPDDPVKYVHRVGRTARAGRCGNALMFLLPQEELFLKYLYDDAKVKVNEYTF----- 540
Query: 793 NLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSK 852
DL+RL GNV Q E V L TSA + Y ++ Y+S
Sbjct: 541 ---------DLTRL-KGNV-------QGQLEQLVSSNYYLRTSARQAYEGYLLSYSSC-- 581
Query: 853 DLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+++FN + + L A+ FAL + P +
Sbjct: 582 QLKNVFNIQNLDLAAVARGFALSEPPPI 609
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q I L G D+L ++TG+GKTLA+ IPI++ + R +G A+II
Sbjct: 186 ELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIV--CRSGFRPSNGTAAIIIG 243
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + KL K F + GG+ E ++ G+ I+VA+PGRLLDH
Sbjct: 244 PTRELCLQIEGVLLKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLLDHL 303
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L K + Q+ L SAT T
Sbjct: 304 KLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNR---QTFLFSATQT 355
>gi|313231028|emb|CBY19026.1| unnamed protein product [Oikopleura dioica]
Length = 588
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 274/509 (53%), Gaps = 53/509 (10%)
Query: 406 LNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 465
+ +GM + + +Q SI +L G DVL ++TGSGKTLA+ +PI++ + ++ K ++
Sbjct: 128 ITKGMGYSNMMPIQARSIPHLLTGKDVLAAAKTGSGKTLAFLVPIVELITKL--KFMNRN 185
Query: 466 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
G A+I+ PTRELA+QT + +L ++ + + GG K+E +++ GI+ILVATP
Sbjct: 186 GTGAIILSPTRELAMQTFGVLKELMENHSQTF-GLIMGGSDRKAEAKKLQNGINILVATP 244
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++T + +DEADRIL+ G+E ++ ++++ K++ Q++L SAT
Sbjct: 245 GRLLDHLQNTANFMVKNLMCFCIDEADRILEVGFEEEMKSIVKLIPKKR---QTMLFSAT 301
Query: 586 LTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T ++ LA ++L+ P+ I D S D L+Q ++++ R+ L +F
Sbjct: 302 QTKKIEDLARISLKKVPVYIGVDDDK-------STATSDMLEQGYVMSEGDARIRILYTF 354
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++++ K++VF ++ +H EL + + +I +HG QS+RT +
Sbjct: 355 L-------KKNKKKKIMVFFSSCMSVKFHYELFNYI---DIPVLSIHGKQKQSKRTSTYF 404
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR--VGHEGSSLL 762
F + ++G++ CTDVAARGLD+P VDWIVQY P +Y+HRVGR R +G +LL
Sbjct: 405 QFCNAETGIMFCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRACRGDSTDKGHALL 464
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL P+E+ + L+ ++ + E ++ E+ +Q
Sbjct: 465 FLRPAEIGFLLYLKKAKVPLSEFTIQ-----------------------ESKVANIQNQL 501
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E + L+ SA +GY S VR YAS+S LR++F + + L A+SF P V
Sbjct: 502 EKLLKTNYYLNQSAKEGYKSCVRAYASHS--LRNVFEVQTLDLKKVARSFGFDTPPWVDI 559
Query: 883 GIGKPKNKEELKNKK--MAINKEKSFKQR 909
G+ K K E +K M K++ K R
Sbjct: 560 GVAGVKRKGEKDGRKERMISKKKRGGKTR 588
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + + +Q SI +L G DVL ++TGSGKTLA+ +PI++ + ++ K ++G A
Sbjct: 132 MGYSNMMPIQARSIPHLLTGKDVLAAAKTGSGKTLAFLVPIVELITKL--KFMNRNGTGA 189
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L ++ + + GG K+E +++ GI+ILVATPGRLL
Sbjct: 190 IILSPTRELAMQTFGVLKELMENHSQTF-GLIMGGSDRKAEAKKLQNGINILVATPGRLL 248
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + +DEADRIL+ G+E ++ ++++ K++ Q++L SAT T
Sbjct: 249 DHLQNTANFMVKNLMCFCIDEADRILEVGFEEEMKSIVKLIPKKR---QTMLFSATQT 303
>gi|115492529|ref|XP_001210892.1| ATP-dependent RNA helicase DDX18 [Aspergillus terreus NIH2624]
gi|121742586|sp|Q0CZS8.1|HAS1_ASPTN RecName: Full=ATP-dependent RNA helicase has1
gi|114197752|gb|EAU39452.1| ATP-dependent RNA helicase DDX18 [Aspergillus terreus NIH2624]
Length = 576
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 284/530 (53%), Gaps = 56/530 (10%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
AP ++E P MK M +T +QQ +I P L G D+L ++TGSGKTLA+
Sbjct: 96 APQKFDELNLSEPTMKAIRQ--MGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFL 153
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
IP ++ L +R K ++G +II PTRELALQ + +LC+ F + GG
Sbjct: 154 IPAVEMLSALRFK--PRNGTGVIIITPTRELALQIFGVAKELCE-FHSQTYGIVIGGANR 210
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
++E ++ KG+++L+ATPGRLLDH ++T+ + + LVLDEADR LD G+E ++ + +
Sbjct: 211 RAEAEKLNKGVNLLIATPGRLLDHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIV 270
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLK 626
+IL + + Q++L SAT T V+ LA ++L+ P+ I+ D H T D +
Sbjct: 271 KILPSE--ERQTLLFSATQTTKVEDLARISLKPGPLYINV-DHRKEHATVDGV------D 321
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q +I+ R + L +F + ++ + K+++F ++ + Y+ +LL+ + ++
Sbjct: 322 QGYIICEADKRFLLLFTF-------LKKNLKKKIIIFFSSCNAVKYYADLLNYI---DLP 371
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG + Q RT+ F F + G LICTDVAARGLD+P VD+I+Q+ P Y+H
Sbjct: 372 VLALHGKLKQQTRTQRFFEFCNATQGTLICTDVAARGLDIPAVDYIIQFDPPDEPKAYIH 431
Query: 747 RVGRTARV--GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
RVGRTAR G G S++ L PSEV + L+ R+ + V+ E
Sbjct: 432 RVGRTARGTKGKIGRSIMLLQPSEVGFLNVLREARVPV--------------VEFEFPQK 477
Query: 805 RLADGNVETAATALQMSFESAVLQQKILH--TSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
++ D +Q E + Q L+ SA GY +++ YAS+S LR +FN +
Sbjct: 478 KIID---------IQSQLEKLIGQNYYLNQIQSAKDGYRAYLHAYASHS--LRSVFNINK 526
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK--MAINKEKSFKQRG 910
+ L AKSF P V +G +K++++ ++ + NK FK+R
Sbjct: 527 LDLVKVAKSFGFTTPPRVDITLGASMSKDKVQARRPYGSQNKSARFKRRA 576
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P L G D+L ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 116 MGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEMLSALRFK--PRNGTGV 173
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +LC+ F + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 174 IIITPTRELALQIFGVAKELCE-FHSQTYGIVIGGANRRAEAEKLNKGVNLLIATPGRLL 232
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + LVLDEADR LD G+E ++ + ++IL + + Q++L SAT T
Sbjct: 233 DHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIVKILPSE--ERQTLLFSATQT 288
>gi|156089263|ref|XP_001612038.1| DEAD/DEAH box domain containing protein [Babesia bovis]
gi|154799292|gb|EDO08470.1| DEAD/DEAH box domain containing protein [Babesia bovis]
Length = 509
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 287/533 (53%), Gaps = 54/533 (10%)
Query: 349 EIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNE 408
++ K TEV S ++PD N + L P F +++ P + L E
Sbjct: 3 KVDKDTEVVEEEPESKATSSPDTTN--STHLTPKKRDYFTDIYFKDLDLSEPLIN-GLTE 59
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
+N + T +Q I +L G DVL ++ TGSGKTLA+ +P+ + L ++ K ++G
Sbjct: 60 -LNFERTTEIQAKCIPHLLQGKDVLGKAHTGSGKTLAFLVPLAEVLFQV--KFMPRNGTG 116
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
+II PTREL+ QT + + K + + GG + E R+ +GI+IL+ATPGRL
Sbjct: 117 GLIISPTRELSEQTFAVAKDVLKYLPQTI-GLVMGGTNRRGEAERLSRGINILIATPGRL 175
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH ++T+ + + L++DEADRIL+ G+E ++ + +++L K++ Q+ L SAT T
Sbjct: 176 LDHMQNTKGFLYKNLLVLIIDEADRILEIGFEEEMNQIIKLLPKKR---QTCLFSATHTS 232
Query: 589 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ + +++ NP+ + A S D+ +L+Q ++V + R + L SF+
Sbjct: 233 KVEDMVRLSMTNPVFVQAC-SKDVATVA-------TLEQGYVVCEAENRFMLLFSFL--- 281
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ + +H LL+ + +IA ++G Q++R+ + +F +
Sbjct: 282 ----KRHLDKKIMVFFSSGNSVKFHDALLNYI---DIAVKSIYGKKQQNKRSSAYYSFCN 334
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K+G+L+CTDVAARG D+P VDWIVQY PS DY+HRVGRTAR EG +++FL+P
Sbjct: 335 AKTGILLCTDVAARGWDIPKVDWIVQYDPPSDPRDYIHRVGRTARGADGEGRAIMFLMPE 394
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + K E +L+++A +Q+ E V
Sbjct: 395 ELGFLHYLKELKVPLS--------------KYEFELNKIA---------KVQVQLEKLVE 431
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ ++ + Y S+++ Y S+S L+ IFN + L AKSF + P V
Sbjct: 432 KNFYLNRASREAYRSYLQAYLSHS--LKDIFNVHSLDLIRVAKSFGFSNPPKV 482
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 125/217 (57%), Gaps = 21/217 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N + T +Q I +L G DVL ++ TGSGKTLA+ +P+ + L ++ K ++G
Sbjct: 60 LNFERTTEIQAKCIPHLLQGKDVLGKAHTGSGKTLAFLVPLAEVLFQV--KFMPRNGTGG 117
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+ QT + + K + + GG + E R+ +GI+IL+ATPGRLL
Sbjct: 118 LIISPTRELSEQTFAVAKDVLKYLPQTI-GLVMGGTNRRGEAERLSRGINILIATPGRLL 176
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + + L++DEADRIL+ G+E ++ + +++L K++ Q+ L SAT
Sbjct: 177 DHMQNTKGFLYKNLLVLIIDEADRILEIGFEEEMNQIIKLLPKKR---QTCLFSAT---- 229
Query: 181 TCWCKHTETLKFSKVEHLV-LDEADRILDQGYERDIA 216
HT SKVE +V L + + Q +D+A
Sbjct: 230 -----HT-----SKVEDMVRLSMTNPVFVQACSKDVA 256
>gi|219119904|ref|XP_002180703.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408176|gb|EEC48111.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 589
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 274/514 (53%), Gaps = 61/514 (11%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
++E P + K LN+ + T++T +Q +I P+L G D++ ++TGSGKTLA+ IP
Sbjct: 99 TFENLP-LSEKTKYGLND-LGFTRMTQIQSKAIPPLLTGKDLIGAAKTGSGKTLAFLIPC 156
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEK 506
I+ L + K + K+G ++I PTRELA+Q + +LC S T+ + GG
Sbjct: 157 IELLH--KAKFTSKNGTGVIVISPTRELAMQIYGVLQELCTHGKHSQTY---GLIMGGAN 211
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
++E R+ KG++++V TPGRLLDH ++T+ F + LV+DEADRIL+QG+E D+
Sbjct: 212 RRTESERLAKGVNVIVCTPGRLLDHLQNTKAFVFRNLLALVMDEADRILEQGFEDDLRSI 271
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTL--QNPIQIDAADSTDIHNTTDSLVIPDS 624
L++L K++ Q++L SAT T V+ LA +++ +N + +D T+ L
Sbjct: 272 LKLLPKER---QTMLFSATQTKKVEDLARLSINPKNSVFVDIPSDTN-------LATAAG 321
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGEN 684
L+Q ++ P R + L +F+ ++++ K++VF ++ + YH ELL+ + +
Sbjct: 322 LEQGYVTCPSDKRFLLLFTFLK-------KNKKKKIMVFFSSCNSVKYHAELLNYI---D 371
Query: 685 IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDY 744
+ +HG Q +RT F F G ++CTDVAARGLD+P VDWI+Q+ P +Y
Sbjct: 372 VPVMDIHGRQKQVKRTTTFFQFCKSDIGTMLCTDVAARGLDIPRVDWIIQFDPPDDPKEY 431
Query: 745 VHRVGRTARVGHEGS--SLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD 802
+HRVGRTAR G +GS +LLFL P E + L+ ++ + E ++
Sbjct: 432 IHRVGRTAR-GAKGSGRALLFLTPEETGFLRYLKAAKVTLNEYDFP----TTKVANVQSQ 486
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
L RL + N L+ ++ Y S++ YAS+S R IFN +
Sbjct: 487 LYRLIESNY-------------------YLNRASRDAYRSYLLAYASHSH--RDIFNVHE 525
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNK 896
+ L +F P V GK K K+++ K
Sbjct: 526 LDLQAVGVAFGFTTPPRVDLAFGKEKRKKKVDGK 559
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 117/182 (64%), Gaps = 12/182 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T++T +Q +I P+L G D++ ++TGSGKTLA+ IP I+ L + K + K+G
Sbjct: 116 LGFTRMTQIQSKAIPPLLTGKDLIGAAKTGSGKTLAFLIPCIELLH--KAKFTSKNGTGV 173
Query: 61 VIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
++I PTRELA+Q + +LC S T+ + GG ++E R+ KG++++V TP
Sbjct: 174 IVISPTRELAMQIYGVLQELCTHGKHSQTY---GLIMGGANRRTESERLAKGVNVIVCTP 230
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ F + LV+DEADRIL+QG+E D+ L++L K++ Q++L SAT
Sbjct: 231 GRLLDHLQNTKAFVFRNLLALVMDEADRILEQGFEDDLRSILKLLPKER---QTMLFSAT 287
Query: 177 LT 178
T
Sbjct: 288 QT 289
>gi|256053074|ref|XP_002570034.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353229436|emb|CCD75607.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 527
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 271/506 (53%), Gaps = 51/506 (10%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+E+ P P +K+ + E M T +T +Q I +L+ D++ ++TGSGKTLA+ IP++
Sbjct: 52 FEDLPISEP-IKRAVKE-MGFTHMTDIQGKCIPQLLEHRDLMACAKTGSGKTLAFLIPVV 109
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ + + + ++G A+II PTREL+LQT + +L + FT + + GG ++E
Sbjct: 110 ELMLNL--GLQPRNGTGAIIISPTRELSLQTYGVLGELIQ-FTNLRIGLIMGGSNRQTEA 166
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+ KG++ILVATPGRLLDH +T+ ++ LV+DEADR+LD G+E ++ + +++L
Sbjct: 167 QNLEKGVTILVATPGRLLDHLSNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLP 226
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ Q++L SATL + LA L+ A + + D+ + L+Q ++V
Sbjct: 227 TVR---QTMLFSATLNEKTKNLANAALK-------ASCVMVGSAPDTEATVEGLEQGYVV 276
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
PP R L +F+ +++ K++VFMA+ ++ ELL+ V + +H
Sbjct: 277 CPPDRRFCLLYTFL-------KKNKSKKIMVFMASCMEVKFYYELLNFV---DTPVLAIH 326
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q++RT F F +S VL+CTDV ARGLD+P VDWI+QY P + +Y+HRVGRT
Sbjct: 327 GRQKQAKRTSTFLQFVKAESAVLLCTDVGARGLDIPKVDWILQYDPPDDAKEYIHRVGRT 386
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR G G++LL L P E++ + L+ R+++ E ++ + S++AD
Sbjct: 387 ARAGSTGNALLVLRPHELEFLSILRKARVKVVEYEIAN--------------SKMAD--- 429
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+Q + E + L SA + + VR YAS FN ++ L AK+
Sbjct: 430 ------VQPALEKLIKNNYFLALSAQEAFKGIVRAYASSGLS---CFNVDELDLAATAKT 480
Query: 872 FALRDAPSVISGIGKPKNKEELKNKK 897
L P V + + +E K+
Sbjct: 481 CGLTITPKVDLNVKSKRTRENPGQKR 506
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 114/181 (62%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q I +L+ D++ ++TGSGKTLA+ IP+++ + + + ++G A
Sbjct: 68 MGFTHMTDIQGKCIPQLLEHRDLMACAKTGSGKTLAFLIPVVELMLNL--GLQPRNGTGA 125
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+LQT + +L + FT + + GG ++E + KG++ILVATPGRLL
Sbjct: 126 IIISPTRELSLQTYGVLGELIQ-FTNLRIGLIMGGSNRQTEAQNLEKGVTILVATPGRLL 184
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +T+ ++ LV+DEADR+LD G+E ++ + +++L + Q++L SATL
Sbjct: 185 DHLSNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVR---QTMLFSATLNEK 241
Query: 181 T 181
T
Sbjct: 242 T 242
>gi|356519202|ref|XP_003528262.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 690
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 264/497 (53%), Gaps = 52/497 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M+ ++T +Q +I +L G DVL ++TG+GKTLA+ +P ++ L + + + ++G
Sbjct: 239 MSFHRMTQIQAKAIPTLLTGNDVLGAARTGAGKTLAFLVPAVELLYNV--QFTPRNGTGV 296
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V+I PTRELA+QT + +L K + + + GG K E RI KG+++LVATPGRLL
Sbjct: 297 VVICPTRELAIQTHAVAKELLK-YHSLTLGLVIGGSGRKGEAERIMKGVNLLVATPGRLL 355
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + ++ L++DEADRIL+ +E ++ + + IL K++ Q+ L SAT T
Sbjct: 356 DHLQNTNGFVYKNLKCLMIDEADRILEANFEEEMKQIINILPKKR---QTALFSATQTKK 412
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++ Q PI ID D V + L+Q ++V R V L SF+
Sbjct: 413 VKDLARLSFQTTPIYIDVDDGR-------KKVTNEGLQQGYVVVHCAKRFVVLYSFL--- 462
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF ++ + +H +LL + +HG Q RT F F
Sbjct: 463 ----RRYQSKKVMVFFSSCNSVKFHADLLKCT---GLDCLNIHGKQKQHARTTTFFNFCK 515
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR G +G++LLFLIP
Sbjct: 516 AEKGILLCTDVAARGLDIPDVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPE 575
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E++ + L+ ++ ++E D +LA+ +Q E V
Sbjct: 576 ELQFLHYLKAAKVPVKEYAF--------------DHKKLAN---------VQSQLEKLVA 612
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
L+ A Y S++ Y S+S ++ IFN ++ L A SF + P V I
Sbjct: 613 GIYHLNVMAKDAYRSYILAYNSHS--MKDIFNVHRLDLQAVAASFCFSNPPKVNLNIDSS 670
Query: 888 KNKEELKNKKMA--INK 902
+K K +K+ INK
Sbjct: 671 ASKHRKKIRKVEGKINK 687
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+ ++T +Q +I +L G DVL ++TG+GKTLA+ +P ++ L + + + ++G
Sbjct: 239 MSFHRMTQIQAKAIPTLLTGNDVLGAARTGAGKTLAFLVPAVELLYNV--QFTPRNGTGV 296
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELA+QT + +L K + + + GG K E RI KG+++LVATPGRLL
Sbjct: 297 VVICPTRELAIQTHAVAKELLK-YHSLTLGLVIGGSGRKGEAERIMKGVNLLVATPGRLL 355
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ L++DEADRIL+ +E ++ + + IL K++ Q+ L SAT T
Sbjct: 356 DHLQNTNGFVYKNLKCLMIDEADRILEANFEEEMKQIINILPKKR---QTALFSATQT 410
>gi|322698059|gb|EFY89832.1| ATP-dependent RNA helicase HAS1 [Metarhizium acridum CQMa 102]
Length = 581
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 276/497 (55%), Gaps = 51/497 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K +NE M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K
Sbjct: 117 KAINE-MGFTKMTAIQRTAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSALRFK--P 173
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +++ PTRELALQ + +L + + + GG K+E ++ KG+++L+A
Sbjct: 174 RNGTGVIVVSPTRELALQIFGVARELMQHHSQTY-GIVIGGANRKAEAEKLSKGVNLLIA 232
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH +T + F ++ LV+DEADRIL+ G+E +I + +++L Q++L S
Sbjct: 233 TPGRLLDHLLNTPFV-FKNLKSLVIDEADRILEVGFEDEIRQIVKVLSND--DRQTMLFS 289
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++L+ P+ I+ + D L+Q +++ R + L
Sbjct: 290 ATQTTKVEDLARISLRPGPLYINVDEEKQFSTV-------DGLEQGYVLCDADKRFILLF 342
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SF+ ++++ K++VF ++ + Y+ ELL+ + + LHG Q +RT
Sbjct: 343 SFLK-----RMKEKKKKVIVFFSSCNSVKYYAELLNYI---DCPVLDLHGKQKQQKRTNT 394
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSL 761
F F + + G+LICTDVAARGLD+P VD+IVQ+ P ++ DY+HRVGRTAR + +G SL
Sbjct: 395 FFEFSNAEHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGANTKGRSL 454
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
LFL P+EV + L+ R+ + E + ++N +Q
Sbjct: 455 LFLQPNEVGFLSHLKAARVPVVEFEFPTKHIKN------------------------VQS 490
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
S E + + L SA + + S++ YAS+ LR +++ ++ L AKSF P V
Sbjct: 491 SLEGLIGKNYYLQQSAKEAFKSYLHAYASHG--LRSVYDVHKLDLVRVAKSFGFATPPRV 548
Query: 881 ISGIGKPKNKEELKNKK 897
+G+ ++ ++ ++
Sbjct: 549 DINLGQSMSRNRVQGRR 565
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 129/221 (58%), Gaps = 22/221 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 122 MGFTKMTAIQRTAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSALRFK--PRNGTGV 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG K+E ++ KG+++L+ATPGRLL
Sbjct: 180 IVVSPTRELALQIFGVARELMQHHSQTY-GIVIGGANRKAEAEKLSKGVNLLIATPGRLL 238
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH +T + F ++ LV+DEADRIL+ G+E +I + +++L Q++L SAT
Sbjct: 239 DHLLNTPFV-FKNLKSLVIDEADRILEVGFEDEIRQIVKVLSND--DRQTMLFSATQTTK 295
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR 205
L P + E +FS V+ L VL +AD+
Sbjct: 296 VEDLARISLRPGPLYINVDEEKQFSTVDGLEQGYVLCDADK 336
>gi|326503202|dbj|BAJ99226.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 591
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 258/479 (53%), Gaps = 56/479 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T + +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L + S ++G
Sbjct: 115 MNYTHLAQIQARSIPHLLEGRDVMGAAKTGSGKTLAFLIPAIELLYNLH--FSPRNGTGV 172
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L K + + ++ GG ++E ++ KG+++LVATPGRLL
Sbjct: 173 IVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGNGRRTEADQLAKGVNLLVATPGRLL 231
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT T
Sbjct: 232 DHLQNTKGFIYKRLKCLIIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQTKE 288
Query: 590 VQRLAGMTLQN-------PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
V+ A ++ + P+ I D S + L+Q + V P R + L
Sbjct: 289 VEDFAKLSFEKNEERKEKPVYISVDDGK-------SNATVEGLQQGYCVIPSDKRFLVLY 341
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ K + K++VF ++ +H ELL+ + I +HG Q +RT
Sbjct: 342 AFLKKK-------QSKKVMVFFSSCSSVKFHAELLNFL---QIECEDIHGKQKQQKRTTT 391
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F G+L+CT+VAARGLD+P VD+IVQY P DY+HRVGRTAR +GS+L
Sbjct: 392 FFNFCKADKGILLCTNVAARGLDIPDVDYIVQYDPPDEPKDYIHRVGRTARGEKGKGSAL 451
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL+P E+K + L+ +I + E + + NV LQ
Sbjct: 452 LFLLPQELKFLIYLKAAKISLTEYEFN-------------------NKNVPN----LQSH 488
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E+ V + L+ SA + Y S++ Y S++ ++ IFN + + A SF ++ P V
Sbjct: 489 LENIVGENYFLNQSAKEAYRSYILAYNSHA--MKDIFNVHDLDMKAVAASFCFKNPPKV 545
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 164/330 (49%), Gaps = 74/330 (22%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T + +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L + S ++G
Sbjct: 115 MNYTHLAQIQARSIPHLLEGRDVMGAAKTGSGKTLAFLIPAIELLYNLH--FSPRNGTGV 172
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L K + + ++ GG ++E ++ KG+++LVATPGRLL
Sbjct: 173 IVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGNGRRTEADQLAKGVNLLVATPGRLL 231
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT T
Sbjct: 232 DHLQNTKGFIYKRLKCLIIDEADRILEQNFEEDMKQIFKRLPQNR---QTVLFSATQT-- 286
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
E F+K+ ++ ER K+KP +
Sbjct: 287 ------KEVEDFAKLS----------FEKNEER----------KEKPVY----------- 309
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
I +D S N T + L+Q + V P R + L +F+ K
Sbjct: 310 -------------ISVDDGKS----NAT-----VEGLQQGYCVIPSDKRFLVLYAFLKKK 347
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ K++VF ++ +H ELL+
Sbjct: 348 -------QSKKVMVFFSSCSSVKFHAELLN 370
>gi|52353634|gb|AAU44200.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|215765668|dbj|BAG87365.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 434
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 228/416 (54%), Gaps = 57/416 (13%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
E LFA S+ + G+HP + +L + M T +Q +I + G +LV++ TG+GKT
Sbjct: 17 EGLFASCSFTDL-GLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKT 75
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LAY PI+ LQ P++ R DG +A++++PTREL LQ I +L F W+VP ++ G
Sbjct: 76 LAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMG 135
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
GE EKAR+RKGISIL+ATPGRLLDH +HT + + + +V DEAD IL+ G+ + +
Sbjct: 136 GENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKAL 195
Query: 564 AEFLEIL-----------KKQKP-QFQSILLSATLTPAVQRLAGMTLQNPIQI------- 604
+ LE L K +P + Q++LLSATL V RLA ++L+NP+ I
Sbjct: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
Query: 605 -------------DAADSTDIHNTT-----DSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
D + + HN T D +P L Q ++ RL L + +
Sbjct: 256 SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTIL- 314
Query: 647 GKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE--------------NIAFFKLH 691
+++ E + S K++VF++T D D+H +LS + + F+LH
Sbjct: 315 ---KSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLH 371
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
G+M Q +R + F F S KS +L+ TDVAARGLD P V I+QY +P +++YVHR
Sbjct: 372 GNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHR 427
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +Q +I + G +LV++ TG+GKTLAY PI+ LQ P++ R DG +A
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFA 101
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ I +L F W+VP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 102 LVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLL 161
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-----------KKQKP-QF 168
DH +HT + + + +V DEAD IL+ G+ + + + LE L K +P +
Sbjct: 162 DHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKR 221
Query: 169 QSILLSATLT 178
Q++LLSATL
Sbjct: 222 QNLLLSATLN 231
>gi|413916201|gb|AFW56133.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 603
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 257/478 (53%), Gaps = 50/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN + +T +Q SI ++ G DVL ++TGSGKTLA+ IP I+ L + ++G
Sbjct: 124 MNYSHLTEIQARSIPHLMLGNDVLGSAKTGSGKTLAFLIPAIELLH--KASFMPRNGTGV 181
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L K + + ++ GG M+++ ++ KGI++LVATPGRLL
Sbjct: 182 IVVCPTRELAMQTHNVAKELMKYHSQTL-GYVIGGTNMRNDANQLLKGINLLVATPGRLL 240
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + + +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT
Sbjct: 241 DHLRNTRSFNYKRLQCLIIDEADRILEQNFEEDMKQIFKRLPQDR---QTVLFSATQNQK 297
Query: 590 VQRLAGMTL------QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
V A T Q + D + + T + L +Q + V P + R + L +
Sbjct: 298 VVEFANFTFGQNEERQKKLVYVGVDDSKLKPTVEGL------QQGYCVIPSEKRFLVLYA 351
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F L + Q ED K++VF ++ +H E L+ LG I + +HG Q +RT F
Sbjct: 352 F-LRRMQLRKED--LKVMVFFSSCSSVKFHAEFLN-FLG--IGCYDIHGQQKQQKRTSTF 405
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLL 762
F K+G+L+CT+VAARGLD+P VD+IVQ+ P DY+HRVGRTAR +GS+LL
Sbjct: 406 FQFLKEKNGILLCTNVAARGLDIPDVDYIVQFDPPDDPKDYIHRVGRTARGDKGKGSALL 465
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL+P E+KL+ LQ +I + E E Q
Sbjct: 466 FLLPEELKLLIYLQAAKISLTEYVFS-----------------------EKHVPKSQSQL 502
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E V L+ SA + Y S++ Y S+S ++ IF+ Q+ L A SF ++ P V
Sbjct: 503 EDVVGGNYFLNQSAKEAYRSYLLSYNSHS--MKDIFDVHQLDLKKVAASFCFKNPPKV 558
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 115/176 (65%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN + +T +Q SI ++ G DVL ++TGSGKTLA+ IP I+ L + ++G
Sbjct: 124 MNYSHLTEIQARSIPHLMLGNDVLGSAKTGSGKTLAFLIPAIELLH--KASFMPRNGTGV 181
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L K + + ++ GG M+++ ++ KGI++LVATPGRLL
Sbjct: 182 IVVCPTRELAMQTHNVAKELMKYHSQTL-GYVIGGTNMRNDANQLLKGINLLVATPGRLL 240
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T + + +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT
Sbjct: 241 DHLRNTRSFNYKRLQCLIIDEADRILEQNFEEDMKQIFKRLPQDR---QTVLFSAT 293
>gi|303288912|ref|XP_003063744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454812|gb|EEH52117.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 577
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 260/476 (54%), Gaps = 57/476 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T VQ +I P+L G DVL ++TGSGKTLA+ +P ++ L K ++G
Sbjct: 91 MGYETMTEVQARTIPPLLAGRDVLGAARTGSGKTLAFLVPSVELL--YHAKFMPRNGAGV 148
Query: 470 VIILPTRELALQ----TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+I+ PTRELALQ T ++ TK ++ I+ GG ++E ++ KG+++LVATP
Sbjct: 149 MILTPTRELALQIYNVTQQLMTKHSQTHGLII-----GGANRRAEAEKLVKGVNLLVATP 203
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++T+ FS ++ +DEADR+LD G+E ++ ++++ K + Q++L SAT
Sbjct: 204 GRLLDHMQNTKGFTFSSLKIFCMDEADRMLDIGFEEEMRTIVKMIPKDR---QTMLFSAT 260
Query: 586 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
T V+ LA ++L++P I D+ + T ++Q + V P + R + L +F+
Sbjct: 261 QTTKVEDLARLSLKSPTYIGVDDARAVSTAT-------GVEQGYCVVPSEKRFLLLFTFL 313
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKT 705
++ + K++VF ++ + YH ELL+ + +I +HG Q RT F
Sbjct: 314 -------KKNLKKKVMVFFSSCNSVKYHAELLNYI---DIPVSDIHGKQKQQRRTTTFFE 363
Query: 706 FRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFL 764
F + GVL+CTDVAARGLD+P VDWI+Q+ P +Y+HRVGRTAR G +LLFL
Sbjct: 364 FCKAERGVLLCTDVAARGLDIPDVDWIIQFDPPDDPKEYIHRVGRTARGTDGRGRALLFL 423
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
IP E+ ++ L+ ++ + E + + ++A+ +Q E
Sbjct: 424 IPEELAFLKYLKAAKVPLNEYEFPN--------------KKIAN---------VQSQLEK 460
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
V + LH SA Y +++ Y S++ L+ ++N +++L A SF P V
Sbjct: 461 LVEKNYYLHQSARDAYRAYILAYNSHT--LKDVYNVHELNLAQVATSFGFHRPPKV 514
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 113/182 (62%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKTLA+ +P ++ L K ++G
Sbjct: 91 MGYETMTEVQARTIPPLLAGRDVLGAARTGSGKTLAFLVPSVELL--YHAKFMPRNGAGV 148
Query: 61 VIILPTRELALQ----TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+I+ PTRELALQ T ++ TK ++ I+ GG ++E ++ KG+++LVATP
Sbjct: 149 MILTPTRELALQIYNVTQQLMTKHSQTHGLII-----GGANRRAEAEKLVKGVNLLVATP 203
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ FS ++ +DEADR+LD G+E ++ ++++ K + Q++L SAT
Sbjct: 204 GRLLDHMQNTKGFTFSSLKIFCMDEADRMLDIGFEEEMRTIVKMIPKDR---QTMLFSAT 260
Query: 177 LT 178
T
Sbjct: 261 QT 262
>gi|302309551|ref|NP_986999.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|442570164|sp|Q74Z73.2|HAS1_ASHGO RecName: Full=ATP-dependent RNA helicase HAS1
gi|299788412|gb|AAS54823.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|374110250|gb|AEY99155.1| FAGR333Cp [Ashbya gossypii FDAG1]
Length = 504
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 267/479 (55%), Gaps = 51/479 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P++ G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 57 MGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSL--KFKPRNGTGV 114
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 115 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLAKGVNLLIATPGRLL 173
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 174 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNEDRQ--SMLFSATQTTK 231
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ DS +T D L +Q ++V R + L +F L K
Sbjct: 232 VEDLARISLRPGPLFINV-DSEKETSTADGL------EQGYVVCDSDKRFLLLFTF-LKK 283
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
QN K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F +
Sbjct: 284 FQN------KKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCN 334
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL P
Sbjct: 335 AERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPH 394
Query: 768 EVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ ++ + E + + + N+ S L +L N E
Sbjct: 395 ELGFLRYLKAAKVPLNEYEFPANKIANVQS-----QLEKLLKTNYE-------------- 435
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
L+ A GY S+++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 436 -----LNKIAKDGYRSYLQAYASHS--LKTVYQIDKLDLVKVAKSYGFPVPPKVNITIG 487
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P++ G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 57 MGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSL--KFKPRNGTGV 114
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 115 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLAKGVNLLIATPGRLL 173
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 174 DHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNEDR--QSMLFSATQT 229
>gi|71665086|ref|XP_819517.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
Brener]
gi|70884821|gb|EAN97666.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
Length = 608
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 291/597 (48%), Gaps = 78/597 (13%)
Query: 349 EIPKKTEVKSGPISSLFQNNPDIPNVPT---------RRLKPVSEALFAPTSYEEFPGIH 399
E+P + G + + P++P+ R + P +A AP E P +
Sbjct: 55 EVPAAATKEEGAGRRVKKARPELPSQQEENAEEEKQERSVNP-DDATRAPKQRERAPCVS 113
Query: 400 PFMKKNLN--------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+ NLN ++T +Q + L G D+L ++TGSGKTLA+ IPI+
Sbjct: 114 DYKALNLNPHIVTALENDFKFGELTGIQGRCVPAALSGRDLLAEAKTGSGKTLAFLIPIV 173
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTW-IVPSWLTGGEKMKSE 510
+ + R K+G AVII PTREL LQ + KL K F I GG+ E
Sbjct: 174 EIIS--RAGFRAKNGTAAVIIGPTRELCLQIEGVLLKLLKHFNGSITFLCCIGGQSRNQE 231
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
++ G+ I++A+PGRLLDH K T + L +DEADR+LD G+E D+ E + +L
Sbjct: 232 AFKLVNGMMIVIASPGRLLDHLKLTTDWLTKNLLVLAVDEADRVLDNGFEEDMREIVSLL 291
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
K++ Q+ L SAT T V++LA ++ P + + + T D+L +Q ++
Sbjct: 292 PKKR---QTFLFSATQTTRVEQLARISFYRPPLLISMKRREEKATVDTL------EQGYV 342
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ P + RL+ L F V + + KM+VF ++++ +H EL + + +AF
Sbjct: 343 MCPSEQRLLVLYHF-------VKRNLKKKMIVFFSSRNAVSFHCELFNYIDVPCVAF--- 392
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG Q +R+ + F + SGVL TDVAARGLD+P VDWIVQ+ P YVHRVGR
Sbjct: 393 HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPHVDWIVQFDPPDDPVKYVHRVGR 452
Query: 751 TARVGHEGSSLLFLIPSEVKLVEEL-QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
TAR G G++L+FL+P E ++ L + + + E DLS++ G
Sbjct: 453 TARAGRCGNALMFLLPQEKLFLKYLYDDAHVTVSEYTF--------------DLSKVKQG 498
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
E E V L TSA + Y ++ Y+ S L+++F+ + L A
Sbjct: 499 VCE--------QLEQLVSTNYYLRTSARQAYEGYLLSYS--SSQLKNVFDIHNLDLAAVA 548
Query: 870 KSFALRDAPSVISGIGKP------KNKEELKN-------KKMAINKEKSFKQRGNFS 913
K FAL + P + + + K++ E ++ ++ A+N+E K++ N S
Sbjct: 549 KGFALSEPPPLKLDLSQSAAHMSKKSRREFRHMKETKDKRRRAVNEETLKKRKSNIS 605
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q + L G D+L ++TGSGKTLA+ IPI++ + R K+G AVII
Sbjct: 136 ELTGIQGRCVPAALSGRDLLAEAKTGSGKTLAFLIPIVEIIS--RAGFRAKNGTAAVIIG 193
Query: 65 PTRELALQTLEIFTKLCKSFTW-IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + KL K F I GG+ E ++ G+ I++A+PGRLLDH
Sbjct: 194 PTRELCLQIEGVLLKLLKHFNGSITFLCCIGGQSRNQEAFKLVNGMMIVIASPGRLLDHL 253
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L K++ Q+ L SAT T
Sbjct: 254 KLTTDWLTKNLLVLAVDEADRVLDNGFEEDMREIVSLLPKKR---QTFLFSATQT 305
>gi|358392732|gb|EHK42136.1| hypothetical protein TRIATDRAFT_251604 [Trichoderma atroviride IMI
206040]
Length = 468
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 277/490 (56%), Gaps = 48/490 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T++Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 7 MGFTKMTSIQRSAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGV 64
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 65 IVVSPTRELALQIFGVARELMKHHSQTY-GIVIGGANRRAEVEKLTKGVNLLIATPGRLL 123
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +T+ + F ++ L++DEADRIL+ G+E ++ + +++L Q ++L SAT T
Sbjct: 124 DHLLNTQFV-FKNLKSLIIDEADRILEVGFEDEMRQIVKVLSNDDRQ--TMLFSATQTTK 180
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T D L +Q +++ R + L SF L K
Sbjct: 181 VEDLARISLRPGPLYINV-DEEKQHSTVDGL------EQGYVLCEGDERFLLLFSF-LRK 232
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q ++ K++VF ++ + Y++ELL+ + + LHG Q +RT F F +
Sbjct: 233 MQA----KKKKVIVFFSSCNSVKYYSELLNYI---DCPVLDLHGKQKQQKRTNTFFEFSN 285
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
G+LICTDVAARGLD+P VD+IVQ+ P ++ DY+HRVGRTAR +G SLLFL P+
Sbjct: 286 APHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGSDAKGRSLLFLQPN 345
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ R+ + E + + +++V Q E +
Sbjct: 346 EVGFLSHLKAARVPVVEFEFPR--KKIINV---------------------QSQLEKLIG 382
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L SA + +++ YAS+S LR +++ +++ L AKSF P V +G
Sbjct: 383 KNYYLQQSAKDAFKAYLHAYASHS--LRSVYDVQKLDLVKIAKSFGFSTPPRVDIQLGAS 440
Query: 888 KNKEELKNKK 897
K++++ ++
Sbjct: 441 MGKDKVQARR 450
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 142/246 (57%), Gaps = 22/246 (8%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T++Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 7 MGFTKMTSIQRSAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGV 64
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 65 IVVSPTRELALQIFGVARELMKHHSQTY-GIVIGGANRRAEVEKLTKGVNLLIATPGRLL 123
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH +T+ + F ++ L++DEADRIL+ G+E ++ + +++L Q++L SAT
Sbjct: 124 DHLLNTQFV-FKNLKSLIIDEADRILEVGFEDEMRQIVKVLSNDDR--QTMLFSATQTTK 180
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
L P + E + S V+ L E +L +G ER + F L+K + +
Sbjct: 181 VEDLARISLRPGPLYINVDEEKQHSTVDGL---EQGYVLCEGDERFLLLF-SFLRKMQAK 236
Query: 229 FQSVLL 234
+ V++
Sbjct: 237 KKKVIV 242
>gi|358382399|gb|EHK20071.1| hypothetical protein TRIVIDRAFT_171594 [Trichoderma virens Gv29-8]
Length = 584
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 275/490 (56%), Gaps = 48/490 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 123 MGFTKMTNIQRSAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFKP--RNGTGV 180
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARELMKHHSQTY-GIVIGGANRRAEVDKLTKGVNLLIATPGRLL 239
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +T+ + F ++ L++DEADRIL+ G+E ++ + +++L + Q++L SAT T
Sbjct: 240 DHLLNTQFV-FKNLKSLIIDEADRILEVGFEDEMRQIVKVLSNE--DRQTMLFSATQTTK 296
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T D L +Q +++ R + L SF L K
Sbjct: 297 VEDLARISLRPGPLYINV-DEEKQHSTVDGL------EQGYVLCEGDERFLLLFSF-LRK 348
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q ++ K++VF ++ Y+ ELL+ + + LHG Q +RT F F +
Sbjct: 349 MQA----KKKKVIVFFSSCASVKYYAELLNYI---DCPVLDLHGKQKQQKRTNTFFEFSN 401
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
G+LICTDVAARGLD+P VD+IVQ+ P ++ DY+HRVGRTAR +G SLLFL P+
Sbjct: 402 APHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGADAKGRSLLFLQPN 461
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ R+ + E + + +++V Q E +
Sbjct: 462 EVGFLSYLKAARVPVVEFEFP--RKKIINV---------------------QSQLEKLIG 498
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L SA + S++ YAS+S LR +++ +++ L AKSF P V +G
Sbjct: 499 KNYYLQQSAKDAFKSYLHAYASHS--LRSVYDVQKLDLTKIAKSFGFPTPPRVDITLGAS 556
Query: 888 KNKEELKNKK 897
+++++ ++
Sbjct: 557 MGRDKVQARR 566
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 147/258 (56%), Gaps = 22/258 (8%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 123 MGFTKMTNIQRSAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGV 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARELMKHHSQTY-GIVIGGANRRAEVDKLTKGVNLLIATPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH +T+ + F ++ L++DEADRIL+ G+E ++ + +++L + Q++L SAT
Sbjct: 240 DHLLNTQFV-FKNLKSLIIDEADRILEVGFEDEMRQIVKVLSNE--DRQTMLFSATQTTK 296
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 228
L P + E + S V+ L E +L +G ER + F L+K + +
Sbjct: 297 VEDLARISLRPGPLYINVDEEKQHSTVDGL---EQGYVLCEGDERFLLLF-SFLRKMQAK 352
Query: 229 FQSVLLSATLTPAVQRLA 246
+ V++ + +V+ A
Sbjct: 353 KKKVIVFFSSCASVKYYA 370
>gi|363752775|ref|XP_003646604.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890239|gb|AET39787.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
Length = 500
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 272/491 (55%), Gaps = 55/491 (11%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T VQ +I P++ G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 52 EKMGFTTMTQVQAKTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGT 109
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++++ATPGR
Sbjct: 110 GVIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLSKGVNLIIATPGR 168
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 169 LLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIKILPNEDRQ--SMLFSATQT 226
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ D T ++ D L+Q ++V R + L +F L
Sbjct: 227 TKVEDLARISLRPGPLFINV----DSEKETSTV---DGLEQGYVVCESDKRFLLLFTF-L 278
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
K Q K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 279 KKFQT------KKIIVFLSSCNSVRYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 329
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL
Sbjct: 330 CNAQRGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 389
Query: 766 PSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
P+E+ + L+ ++ + E + + + N+ S L +L N E
Sbjct: 390 PNELGFLRYLKAAKVPLNEYEFPANKIANVQS-----QLEKLLKTNYE------------ 432
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---I 881
L+ A GY S+++ YAS+S L+ ++ ++ L AKS+ P V I
Sbjct: 433 -------LNRIAKDGYRSYLQAYASHS--LKTVYQIDKLDLVKVAKSYGFSVPPKVNITI 483
Query: 882 SGIGK-PKNKE 891
GK P NK+
Sbjct: 484 GASGKTPTNKK 494
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I P++ G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 54 MGFTTMTQVQAKTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGTGV 111
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++++ATPGRLL
Sbjct: 112 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLSKGVNLIIATPGRLL 170
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 171 DHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIKILPNEDR--QSMLFSATQT 226
>gi|401411581|ref|XP_003885238.1| ATP-dependent RNA helicase DDX55,related [Neospora caninum
Liverpool]
gi|325119657|emb|CBZ55210.1| ATP-dependent RNA helicase DDX55,related [Neospora caninum
Liverpool]
Length = 569
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 272/501 (54%), Gaps = 53/501 (10%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
P ++ F+ ++E P +KK L E M + ++T +Q +I +L+G DVL ++TGS
Sbjct: 76 PGKDSFFSDVAFESLDICEP-VKKALAE-MKMERLTEIQAKAIPRLLEGRDVLGAAKTGS 133
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLA+ +P ++ L ++ K ++G ++I PTREL+LQ ++ +L K F
Sbjct: 134 GKTLAFLVPAVELLYQV--KFLPRNGTGVIVISPTRELSLQIFDVAAELSK-FLPQTLGL 190
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
+ GG K E +++KG++ILVATPGRLLDH ++T+ ++S + LV+DEADRIL G+E
Sbjct: 191 VIGGANRKHEVEKLQKGVNILVATPGRLLDHLQNTKGFQYSNLLSLVIDEADRILQIGFE 250
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV 620
++ L++L + + Q+ L SAT + V LA ++L+ P+ ++ D++
Sbjct: 251 EEMNAILQMLPQTR---QTCLFSATQSAKVADLARLSLKKPVFVE---------VKDTVA 298
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
++Q ++V P + R + L +F+ ++ E K++VF ++ +H EL + +
Sbjct: 299 TVRGIQQGYVVCPAEERFLLLFTFL-------KKNREKKIMVFFSSCMSVRFHDELFNYI 351
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
++ +HG Q+ R + F + + G+L+CTDVAARGLD+P VDWIVQY P
Sbjct: 352 ---DLPTTCIHGKKKQNARMSTYYDFCNAEKGILLCTDVAARGLDIPKVDWIVQYDPPDD 408
Query: 741 STDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKM 799
+Y+HRVGRTAR G G +LLFL+ E+ + L+ + + E
Sbjct: 409 PKEYIHRVGRTARGAGGTGKALLFLMAEEIGFLRYLKQAGVPLNEYTFPS---------- 458
Query: 800 EGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
+++A+ +Q E + + LH ++ Y S++ YAS++ L+ IFN
Sbjct: 459 ----NKIAN---------VQSQLERLIEKNYYLHKASQDAYRSYLHAYASHT--LKDIFN 503
Query: 860 FKQIHLGHFAKSFALRDAPSV 880
+ L A++F P V
Sbjct: 504 VHALDLQRVARAFGFSVPPRV 524
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + ++T +Q +I +L+G DVL ++TGSGKTLA+ +P ++ L ++ K ++G
Sbjct: 103 MKMERLTEIQAKAIPRLLEGRDVLGAAKTGSGKTLAFLVPAVELLYQV--KFLPRNGTGV 160
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTREL+LQ ++ +L K F + GG K E +++KG++ILVATPGRLL
Sbjct: 161 IVISPTRELSLQIFDVAAELSK-FLPQTLGLVIGGANRKHEVEKLQKGVNILVATPGRLL 219
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T+ ++S + LV+DEADRIL G+E ++ L++L + + Q+ L SAT
Sbjct: 220 DHLQNTKGFQYSNLLSLVIDEADRILQIGFEEEMNAILQMLPQTR---QTCLFSAT 272
>gi|268566495|ref|XP_002639737.1| Hypothetical protein CBG12465 [Caenorhabditis briggsae]
Length = 542
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 261/473 (55%), Gaps = 51/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ T +T +Q +I P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K + +G
Sbjct: 85 LGFTTLTEIQAKTIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWK--QHNGTGV 142
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL++QT + T+L + + + + GG +EK ++ KG+SILVATPGRLL
Sbjct: 143 IIVSPTRELSMQTYGVLTELLEG-SNLTFGLVMGGSNRSAEKDKLAKGVSILVATPGRLL 201
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++ L ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P
Sbjct: 202 DHLQNDNFL-VRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSPK 257
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V L + L NP+++ N + L+Q +IV P RL+ L +
Sbjct: 258 VDELVKLALHSNPVRVSV-------NEKAEEATVEGLQQGYIVAPSDKRLLLLFT----- 305
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ +++ K++VF ++ + +H ELL+ + ++ +HG Q +RT F TF
Sbjct: 306 --FLKKNKTKKVMVFFSSCNSVKFHHELLNYI---DVPCMSIHGKQKQQKRTSTFFTFCQ 360
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +LL L P
Sbjct: 361 AESGILLCTDVAARGLDIPAVDWIVQYDPPDEPREYIHRVGRTARGTNGSGKALLVLRPE 420
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A+ +Q ES +
Sbjct: 421 ELGFLRYLKAAKVTLNE--------------FEFSWNKVAN---------IQTQLESLIS 457
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ SA + Y ++R Y S+S L+ IF+ + L +KSF P V
Sbjct: 458 KNYYLNKSAKEAYKCYLRAYDSHS--LKDIFDVTTMDLTAVSKSFGFSVPPFV 508
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 117/179 (65%), Gaps = 7/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T +Q +I P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K + +G
Sbjct: 85 LGFTTLTEIQAKTIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWK--QHNGTGV 142
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL++QT + T+L + + + + GG +EK ++ KG+SILVATPGRLL
Sbjct: 143 IIVSPTRELSMQTYGVLTELLEG-SNLTFGLVMGGSNRSAEKDKLAKGVSILVATPGRLL 201
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
DH ++ L ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P
Sbjct: 202 DHLQNDNFL-VRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSP 256
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 18/134 (13%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ-NPIQI 256
L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P V L + L NP+++
Sbjct: 217 LIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSPKVDELVKLALHSNPVRV 273
Query: 257 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 316
N + L+Q +IV P RL+ L + + +++ K++VF
Sbjct: 274 SV-------NEKAEEATVEGLQQGYIVAPSDKRLLLLFT-------FLKKNKTKKVMVFF 319
Query: 317 ATQDMADYHTELLS 330
++ + +H ELL+
Sbjct: 320 SSCNSVKFHHELLN 333
>gi|145547076|ref|XP_001459220.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427044|emb|CAK91823.1| unnamed protein product [Paramecium tetraurelia]
Length = 556
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 285/538 (52%), Gaps = 55/538 (10%)
Query: 380 KPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTG 439
K V+ A+ + + +F P KK L E MN T++T +Q +I +L G DVL ++TG
Sbjct: 64 KNVNTAILSDKKFTDFALCEP-SKKAL-EKMNFTKMTHIQARAIPHLLKGRDVLGAAKTG 121
Query: 440 SGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPS 499
SGKTLA+ +P ++ L + + +K+G +++ PTRELA Q ++ L +
Sbjct: 122 SGKTLAFLVPALELL--YKNQFQQKNGTGIIVLTPTRELAQQIFDVAKDLL-FYHQKTLG 178
Query: 500 WLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGY 559
L GG K E R++KG++IL+ATPGRLLDH ++T+ + ++ L++DEAD++L GY
Sbjct: 179 LLIGGANRKEEAIRLQKGVNILIATPGRLLDHLQNTKGFIYHNLQCLIIDEADQLLKIGY 238
Query: 560 ERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSL 619
E ++ E L +L ++ Q++L SAT T V LA ++L PI I D +
Sbjct: 239 EEEMNEILNLLPSER---QTVLFSATQTKKVDDLARLSLNQPIYIGVDDIAQEATVS--- 292
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 679
L+Q +++ + + L + + + + K++VFM++ + +H ELL+
Sbjct: 293 ----GLEQGYVIVEADKKFLLLFT-------FLQLNSDKKIMVFMSSCNSVKFHAELLNF 341
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPS 739
V ++ +HG QS+RT + F + K GVL+CTDVAARGLD+P V WI+QY P
Sbjct: 342 V---DMPVLDIHGKQKQSKRTNTYYEFCNAKKGVLVCTDVAARGLDIPEVHWIIQYDPPD 398
Query: 740 SSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
+ +Y+HRVGRT R + G +L+FL+P E + L+ ++ + E +
Sbjct: 399 DTKEYIHRVGRTCRGLNSSGKALIFLLPEEKGYLGHLKLAKVVMNEFEFPS--------- 449
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
+LA+ +Q FE + + L+ SA + Y S++ Y S+S L+ ++
Sbjct: 450 -----EKLAN---------IQEQFEKLIEKNYFLNKSAFEAYRSYLHSYQSHS--LKDVY 493
Query: 859 NFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
+ + L +KSF + P V I + + + + +NK+K G ++KKQ
Sbjct: 494 DVNNLDLVKVSKSFGFKCPPRVSLNIKIASSTKRKQKVQSFMNKKKP----GQWNKKQ 547
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T++T +Q +I +L G DVL ++TGSGKTLA+ +P ++ L + + +K+G
Sbjct: 92 MNFTKMTHIQARAIPHLLKGRDVLGAAKTGSGKTLAFLVPALELL--YKNQFQQKNGTGI 149
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA Q ++ L + L GG K E R++KG++IL+ATPGRLL
Sbjct: 150 IVLTPTRELAQQIFDVAKDLL-FYHQKTLGLLIGGANRKEEAIRLQKGVNILIATPGRLL 208
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ L++DEAD++L GYE ++ E L +L ++ Q++L SAT T
Sbjct: 209 DHLQNTKGFIYHNLQCLIIDEADQLLKIGYEEEMNEILNLLPSER---QTVLFSATQT 263
>gi|426201882|gb|EKV51805.1| hypothetical protein AGABI2DRAFT_190015 [Agaricus bisporus var.
bisporus H97]
Length = 513
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 262/484 (54%), Gaps = 48/484 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q SI +L G DVL ++TGSGKTLA+ IP + L ++ K GI +II P
Sbjct: 1 MTPIQSKSIPLLLAGKDVLGAARTGSGKTLAFLIPAAELLHRLKFKPMNGTGI--IIISP 58
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELALQ + L + + GG ++E ++ KG+++LVATPGRLLDH ++
Sbjct: 59 TRELALQIFGVAKDLMAHHSQTF-GIIMGGANRRAEADKLVKGVNLLVATPGRLLDHLEN 117
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T+ F ++ LV+DEADRIL+ G+E ++ + + IL + Q S+L SAT T VQ LA
Sbjct: 118 TKGFIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDRQ--SMLFSATQTTKVQDLA 175
Query: 595 GMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
M+L+ P+ +D D T ++ +L Q ++V P R + L +F+
Sbjct: 176 RMSLRPGPVYVD----VDKEEATSTV---STLSQGYVVCPSDRRFLLLFTFL-------K 221
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
++ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F + +SG+
Sbjct: 222 KNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLDLHGKQKQQKRTNTFFEFCNAESGI 278
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR G G SLLFL+ SE+ +
Sbjct: 279 LLCTDVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRTARAGKVGKSLLFLLESELGFLR 338
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++ + E ++A+ +Q E + + LH
Sbjct: 339 YLKEAKVPLNEFSFP--------------TEKIAN---------VQSQLEKLLQKNYFLH 375
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
SA G+ ++++ YASYS L+ IF+ Q+ L K+F P V +G +
Sbjct: 376 KSAKDGFRAYLQSYASYS--LKKIFDVNQLDLAKVGKAFGFAVPPRVNVNVGPGRGTSNA 433
Query: 894 KNKK 897
KK
Sbjct: 434 TQKK 437
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 106/173 (61%), Gaps = 5/173 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI +L G DVL ++TGSGKTLA+ IP + L ++ K GI +II P
Sbjct: 1 MTPIQSKSIPLLLAGKDVLGAARTGSGKTLAFLIPAAELLHRLKFKPMNGTGI--IIISP 58
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELALQ + L + + GG ++E ++ KG+++LVATPGRLLDH ++
Sbjct: 59 TRELALQIFGVAKDLMAHHSQTF-GIIMGGANRRAEADKLVKGVNLLVATPGRLLDHLEN 117
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T+ F ++ LV+DEADRIL+ G+E ++ + + IL + QS+L SAT T
Sbjct: 118 TKGFIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDR--QSMLFSATQT 168
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 17/160 (10%)
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LL AT ++T+ F ++ LV+DEADRIL+ G+E ++ + + IL + QS
Sbjct: 103 LLVATPGRLLDHLENTKGFIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDR--QS 160
Query: 232 VLLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 290
+L SAT T VQ LA M+L+ P+ +D D T ++ +L Q ++V P R
Sbjct: 161 MLFSATQTTKVQDLARMSLRPGPVYVD----VDKEEATSTV---STLSQGYVVCPSDRRF 213
Query: 291 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ L +F+ ++ + K++VF ++ + YH ELL+
Sbjct: 214 LLLFTFL-------KKNLKKKVIVFFSSCNSVKYHAELLN 246
>gi|237830427|ref|XP_002364511.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211962175|gb|EEA97370.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221487590|gb|EEE25822.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221507384|gb|EEE32988.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 569
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 271/498 (54%), Gaps = 53/498 (10%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
++ F+ ++E P +KK L E M + ++T +Q SI +L+G DVL ++TGSGKT
Sbjct: 79 DSFFSDVTFESLDICDP-VKKALAE-MKMERLTEIQAKSIPRLLEGRDVLGAAKTGSGKT 136
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+ +P ++ L ++ K ++G ++I PTREL+LQ ++ +L K F + G
Sbjct: 137 LAFLVPAVELLYQV--KFLPRNGTGVIVISPTRELSLQIFDVAAELAK-FLPQTLGLVIG 193
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G K E +++KG++ILVATPGRLLDH ++T+ ++S + LV+DEADRIL G+E ++
Sbjct: 194 GANRKHEVEKLQKGVNILVATPGRLLDHLQNTKGFQYSNLLSLVIDEADRILQIGFEEEM 253
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
L++L + + Q+ L SAT + V LA ++L+ P+ ++ D++
Sbjct: 254 NAILQMLPQTR---QTCLFSATQSAKVADLARLSLKKPVFVE---------VKDTVATVR 301
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
++Q ++V P + R + L +F+ ++ E K++VF ++ +H EL + +
Sbjct: 302 GIQQGYVVCPAEERFLLLFTFL-------KKNREKKIMVFFSSCMSVRFHDELFNYI--- 351
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
++ +HG Q+ R + F + + G+L+CTDVAARGLD+P VDWIVQY P +
Sbjct: 352 DLPTTCIHGKKKQNARMSTYYDFCNAEKGILLCTDVAARGLDIPKVDWIVQYDPPDDPKE 411
Query: 744 YVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD 802
Y+HRVGRTAR G G +LLFL+ E+ + L+ + + E
Sbjct: 412 YIHRVGRTARGAGGTGKALLFLMAEEIGFLRYLKQAGVPLNEYTFPS------------- 458
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++A+ +Q E + + LH ++ Y S++ YAS++ L+ IFN
Sbjct: 459 -NKIAN---------VQSQLERLIEKNYYLHKASQDAYRSYLHAYASHT--LKDIFNVHA 506
Query: 863 IHLGHFAKSFALRDAPSV 880
+ L A++F P V
Sbjct: 507 LDLQRVARAFGFSVPPRV 524
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 114/176 (64%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + ++T +Q SI +L+G DVL ++TGSGKTLA+ +P ++ L ++ K ++G
Sbjct: 103 MKMERLTEIQAKSIPRLLEGRDVLGAAKTGSGKTLAFLVPAVELLYQV--KFLPRNGTGV 160
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTREL+LQ ++ +L K F + GG K E +++KG++ILVATPGRLL
Sbjct: 161 IVISPTRELSLQIFDVAAELAK-FLPQTLGLVIGGANRKHEVEKLQKGVNILVATPGRLL 219
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T+ ++S + LV+DEADRIL G+E ++ L++L + + Q+ L SAT
Sbjct: 220 DHLQNTKGFQYSNLLSLVIDEADRILQIGFEEEMNAILQMLPQTR---QTCLFSAT 272
>gi|242096058|ref|XP_002438519.1| hypothetical protein SORBIDRAFT_10g021310 [Sorghum bicolor]
gi|241916742|gb|EER89886.1| hypothetical protein SORBIDRAFT_10g021310 [Sorghum bicolor]
Length = 567
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 260/491 (52%), Gaps = 53/491 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
I F K + E MN T +T +Q SI ++ G DVL ++TGSGKTLA+ IP I+ L
Sbjct: 109 ISEFTAKAITE-MNYTHLTEIQARSIPHLMLGSDVLGSAKTGSGKTLAFLIPAIELLH-- 165
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
+ + ++G +++ PTRELA+QT + +L K + + ++ GG +++E +I KG
Sbjct: 166 KACFTPRNGTGVIVVCPTRELAIQTHNVAKELMKYHSQTI-GYVIGGTNIRNEANQIVKG 224
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
I++LVATPGRLLDH + T + +++ L++DEADRIL+Q +E D+ + I K+
Sbjct: 225 INLLVATPGRLLDHLRSTSGFHYKRLQCLIIDEADRILEQNFEEDMKQ---IFKRLPSDR 281
Query: 578 QSILLSATLTPAVQRLAGMTL------QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
Q++L SA T V A T Q + D + + T + L +Q + V
Sbjct: 282 QTVLFSAPQTQKVVDFANFTFGQNEERQRKLVYVGVDDSKLKPTVEGL------QQGYCV 335
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P + R + L +F+ + + E + K++VF ++ +H ELL+ I + +H
Sbjct: 336 IPSEKRFLVLYAFL--RRMQLRE-QGVKIMVFFSSCSSVKFHAELLNFF---GIECYDIH 389
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G + Q +RT F F K G+L+CT+VAARGLD+P VD+IVQY P DY+HRVGRT
Sbjct: 390 GQLKQQKRTSTFFRFLKEKRGILLCTNVAARGLDIPDVDYIVQYDPPDDPKDYIHRVGRT 449
Query: 752 ARVGHE--GSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
AR G E GS+LLFL+P E+KL+ LQ I + +
Sbjct: 450 AR-GDEGKGSALLFLLPEELKLLIYLQAANISLTQYVFS--------------------- 487
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
E Q E+ V L+ SA + Y S++ Y S+S ++ IF+ Q+ L A
Sbjct: 488 --EKHVPKSQSQLENIVGGNYFLNQSAKEAYRSYLLAYNSHS--MKDIFDVHQLDLTKVA 543
Query: 870 KSFALRDAPSV 880
SF ++ P V
Sbjct: 544 ASFCFKNPPKV 554
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI ++ G DVL ++TGSGKTLA+ IP I+ L + + ++G
Sbjct: 120 MNYTHLTEIQARSIPHLMLGSDVLGSAKTGSGKTLAFLIPAIELLH--KACFTPRNGTGV 177
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L K + + ++ GG +++E +I KGI++LVATPGRLL
Sbjct: 178 IVVCPTRELAIQTHNVAKELMKYHSQTI-GYVIGGTNIRNEANQIVKGINLLVATPGRLL 236
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T + +++ L++DEADRIL+Q +E D+ +I K+ Q++L SA T
Sbjct: 237 DHLRSTSGFHYKRLQCLIIDEADRILEQNFEEDMK---QIFKRLPSDRQTVLFSAPQT 291
>gi|255087406|ref|XP_002505626.1| predicted protein [Micromonas sp. RCC299]
gi|226520896|gb|ACO66884.1| predicted protein [Micromonas sp. RCC299]
Length = 620
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 257/473 (54%), Gaps = 51/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ T++T VQ +I P+L G DVL ++TGSGKTLA+ IP ++ L K ++G
Sbjct: 137 LGYTRMTEVQARTIPPLLAGRDVLGAARTGSGKTLAFLIPSVELL--YHAKFMPRNGTGV 194
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 195 MVLSPTRELALQIYNVAQQLMKKHSQ-THGLIIGGANRRAEAEKLVKGVNLLVATPGRLL 253
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ +DEADR+LD G+E ++ + ++ K + Q++L SAT T
Sbjct: 254 DHMQNTKGFAFGSLKVFCMDEADRMLDIGFEEEMRTIVRMIPKDR---QTMLFSATQTTK 310
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
V+ LA ++L++P I D+ + T ++Q + V P + R + L +F+
Sbjct: 311 VEDLARLSLKSPTYIGVDDARAVSTAT-------GVEQGYCVVPSEKRFLLLFTFL---- 359
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
++ + K++VF ++ + YH ELL+ + +I +HG Q RT F F
Sbjct: 360 ---KKNLKKKVMVFFSSCNSVKYHAELLNYI---DIPVSDIHGKQKQQRRTTTFFEFCKA 413
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLFLIPS 767
G+L+CTDVAARGLD+P VDWI+Q+ P +Y+HRVGRTAR G EG +LLFLIP
Sbjct: 414 DRGILLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTAR-GTEGKGRALLFLIPE 472
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ ++ L+ ++ + E + ++A+ +Q E V
Sbjct: 473 ELGFLKYLKAAKVPLNEYEFPQ--------------KKIAN---------VQSQLEKLVE 509
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA Y S++ Y S++ L+ ++N +++L A SF P V
Sbjct: 510 KNYYLHQSARDAYRSYILAYNSHT--LKDVYNVHELNLMSVALSFGFHRPPKV 560
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T++T VQ +I P+L G DVL ++TGSGKTLA+ IP ++ L K ++G
Sbjct: 137 LGYTRMTEVQARTIPPLLAGRDVLGAARTGSGKTLAFLIPSVELL--YHAKFMPRNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 195 MVLSPTRELALQIYNVAQQLMKKHSQ-THGLIIGGANRRAEAEKLVKGVNLLVATPGRLL 253
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ +DEADR+LD G+E ++ + ++ K + Q++L SAT T
Sbjct: 254 DHMQNTKGFAFGSLKVFCMDEADRMLDIGFEEEMRTIVRMIPKDR---QTMLFSATQT 308
>gi|403415489|emb|CCM02189.1| predicted protein [Fibroporia radiculosa]
Length = 547
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/511 (34%), Positives = 261/511 (51%), Gaps = 76/511 (14%)
Query: 382 VSEALFAPT---SYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGD 431
+E + AP+ + + PG F + L+E M T +T VQ+ SI P+L G D
Sbjct: 2 AAEGVSAPSPVPNADTAPGRKHFSELELSEPTSKALAEMGFTTMTPVQEKSIPPLLAGKD 61
Query: 432 VLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCK 491
VL ++TGSGKTLA+ IP ++ L M K ++G +II PTRELALQ + +L
Sbjct: 62 VLGAARTGSGKTLAFLIPAVELLHRM--KFKPRNGTGIIIISPTRELALQIFGVAKELMA 119
Query: 492 SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEA 551
+ + GG ++E +++KG +T+ F + LV+DEA
Sbjct: 120 HHSQTF-GIVMGGANRRAEADKLQKG----------------NTKGFVFRNLRGLVIDEA 162
Query: 552 DRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADST 610
DRIL+ G+E ++ + + IL + QS+L SAT T V LA M+L+ P+ ID D T
Sbjct: 163 DRILEVGFEEEMKKIIAILPNE--NRQSMLFSATQTTKVTDLARMSLRPGPLYIDV-DKT 219
Query: 611 DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 670
+ +T +L Q ++V P R + L +F+ + + K++VF ++ +
Sbjct: 220 ERTSTVSTL------SQGYVVCPSDRRFLLLFTFL-------KRNMKKKIVVFFSSCNSV 266
Query: 671 DYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVD 730
YH ELL+ + ++ LHG Q +RT F F + + G L+CTDVAARGLD+P VD
Sbjct: 267 KYHAELLNYI---DVPVLDLHGKQKQQKRTTTFFEFCNAEVGTLLCTDVAARGLDIPRVD 323
Query: 731 WIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL-KD 789
WI+QY P DY+HRVGRTAR G G SL+FL+PSE+ + L++ ++ + E D
Sbjct: 324 WIIQYDPPDDPRDYIHRVGRTARAGKVGKSLMFLLPSELGFLRYLKDAKVPLNEFSFPAD 383
Query: 790 CLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYAS 849
+ N +Q E + + LH SA GY S+++ YAS
Sbjct: 384 QIAN------------------------VQSQLEKLLQKNYFLHQSARDGYRSYLQAYAS 419
Query: 850 YSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
YS L+ IF+ Q+ L KSF P V
Sbjct: 420 YS--LKKIFDVNQLDLAKVGKSFGFSVPPRV 448
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 21/178 (11%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ+ SI P+L G DVL ++TGSGKTLA+ IP ++ L M K ++G
Sbjct: 40 MGFTTMTPVQEKSIPPLLAGKDVLGAARTGSGKTLAFLIPAVELLHRM--KFKPRNGTGI 97
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + GG ++E +++KG
Sbjct: 98 IIISPTRELALQIFGVAKELMAHHSQTF-GIVMGGANRRAEADKLQKG------------ 144
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+T+ F + LV+DEADRIL+ G+E ++ + + IL + QS+L SAT T
Sbjct: 145 ----NTKGFVFRNLRGLVIDEADRILEVGFEEEMKKIIAILPNE--NRQSMLFSATQT 196
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 17/146 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
+T+ F + LV+DEADRIL+ G+E ++ + + IL + QS+L SAT T V L
Sbjct: 145 NTKGFVFRNLRGLVIDEADRILEVGFEEEMKKIIAILPNE--NRQSMLFSATQTTKVTDL 202
Query: 246 AGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
A M+L+ P+ ID D T+ +T +L Q ++V P R + L +F+
Sbjct: 203 ARMSLRPGPLYID-VDKTERTSTV------STLSQGYVVCPSDRRFLLLFTFL------- 248
Query: 305 NEDEESKMLVFMATQDMADYHTELLS 330
+ + K++VF ++ + YH ELL+
Sbjct: 249 KRNMKKKIVVFFSSCNSVKYHAELLN 274
>gi|357115009|ref|XP_003559286.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
27-like [Brachypodium distachyon]
Length = 521
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 255/472 (54%), Gaps = 42/472 (8%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI P+++G DV+ ++TGSGKTLA+ +P ++ L +R S ++G
Sbjct: 66 MNYTHLTHIQARSIPPLMEGRDVMGAAKTGSGKTLAFLVPAVELLYSLR--FSPRNGTGV 123
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELA+ T ++ KL K + + ++ GG + E + KG+++LVATPGRLL
Sbjct: 124 VLVCPTRELAIXTHDVAKKLMKYHSQTL-GYVIGGNSRRGEADQFAKGVNLLVATPGRLL 182
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + + LV+DEADRIL+Q +E D+ + + L + Q++L SAT T
Sbjct: 183 DHLQNTKGFIYKSLRCLVIDEADRILEQNFEEDMKQIFKHLPWNR---QTVLFSATQTVE 239
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
V + ++ + + A + N + L+Q + V P + L +F+ K
Sbjct: 240 VVNFSKLSFEKNEERKGAPVYILANDAKLNATVEGLQQGYCVIPSSDKFSVLYAFLEKK- 298
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
+ K++VF ++ +H ELL+ + I +HG Q +RT F FR
Sbjct: 299 ------QPRKIMVFFSSCSSVKFHAELLNFL---QIECSDIHGKQKQQKRTTTFFNFREA 349
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSE 768
K+G+L+CT+VAARGLD+P VD+IVQY P +Y+HRVGRTA +G++LLFL+P E
Sbjct: 350 KTGILLCTNVAARGLDIPDVDYIVQYDPPDEPKEYIHRVGRTASGEKGKGNALLFLLPHE 409
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+K L+ I + + LK R+ + Q FE+ V +
Sbjct: 410 LKFRIYLKEANISVTQYVLKK--------------ERVPN---------RQPYFENIVCE 446
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L SA + + S++ Y S+S ++ IFN ++ L A SF LR+ P +
Sbjct: 447 NYFLKHSAQEAFRSYILAYNSHS--MKDIFNVHRLDLKDVAASFCLRNPPKL 496
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 120/195 (61%), Gaps = 14/195 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI P+++G DV+ ++TGSGKTLA+ +P ++ L +R S ++G
Sbjct: 66 MNYTHLTHIQARSIPPLMEGRDVMGAAKTGSGKTLAFLVPAVELLYSLR--FSPRNGTGV 123
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELA+ T ++ KL K + + ++ GG + E + KG+++LVATPGRLL
Sbjct: 124 VLVCPTRELAIXTHDVAKKLMKYHSQTL-GYVIGGNSRRGEADQFAKGVNLLVATPGRLL 182
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + + LV+DEADRIL+Q +E D+ + + L + Q++L SAT T
Sbjct: 183 DHLQNTKGFIYKSLRCLVIDEADRILEQNFEEDMKQIFKHLPWNR---QTVLFSATQT-- 237
Query: 181 TCWCKHTETLKFSKV 195
E + FSK+
Sbjct: 238 ------VEVVNFSKL 246
>gi|403352245|gb|EJY75628.1| ATP-dependent RNA helicase Has1 [Oxytricha trifallax]
Length = 650
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 264/474 (55%), Gaps = 49/474 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + T +Q SI L+G DVL ++TGSGKTLA+ IP ++ L + + ++K G
Sbjct: 183 EQFGYKKSTEIQARSIPHALNGRDVLGAAKTGSGKTLAFMIPAVELL--YKAQFTQKKGT 240
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTRELA+Q + L + + + GG K SE ++KG+++LVATPGR
Sbjct: 241 GVIIIAPTRELAMQNYKWARDLLQ-YHSKTHGVVIGGAKRSSEANMLKKGVNLLVATPGR 299
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T F ++ L++DEAD IL G+E ++ + +++L K++ + L SAT+T
Sbjct: 300 LLDHLQNTPGFLFHNLQMLIIDEADAILKVGFEEEMNQIIKLLPKERV---TCLFSATMT 356
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ L ++L+NP+ I+ S D + +T S +L+Q ++V P + L +F+
Sbjct: 357 KKVEDLCRLSLKNPVLIEV--SKDSNTSTVS-----NLEQGYVVIDPAKKFQLLFTFL-- 407
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VFM++ + ++++LL+ V +I +HG Q +RT + F
Sbjct: 408 -----KKNLKKKVMVFMSSCNAVKFYSDLLNYV---DIPVKDIHGKQKQQKRTSTYFEFC 459
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIP 766
++G+L+CTDVA RGLD P VDWI+QY P DY+HRVGRTAR +G +LLFL+
Sbjct: 460 QAETGILLCTDVAQRGLDFPSVDWIIQYDPPDDPEDYIHRVGRTARGASGKGRALLFLLE 519
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ +I+ E + + S+LA ++Q F +
Sbjct: 520 HEIGFLRYLRLSKIKPNEYEFPE--------------SKLA---------SIQEQFMKLI 556
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ SA GY S+++ YAS+ + R +F+ Q+ L A+SF L P V
Sbjct: 557 ERNYYLNCSAKDGYRSFLQAYASHKQ--RELFDVNQLDLQKLAQSFGLASPPRV 608
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 107/172 (62%), Gaps = 6/172 (3%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q SI L+G DVL ++TGSGKTLA+ IP ++ L + + ++K G +II PT
Sbjct: 191 TEIQARSIPHALNGRDVLGAAKTGSGKTLAFMIPAVELL--YKAQFTQKKGTGVIIIAPT 248
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA+Q + L + + + GG K SE ++KG+++LVATPGRLLDH ++T
Sbjct: 249 RELAMQNYKWARDLLQ-YHSKTHGVVIGGAKRSSEANMLKKGVNLLVATPGRLLDHLQNT 307
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
F ++ L++DEAD IL G+E ++ + +++L K++ + L SAT+T
Sbjct: 308 PGFLFHNLQMLIIDEADAILKVGFEEEMNQIIKLLPKERV---TCLFSATMT 356
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 89/159 (55%), Gaps = 17/159 (10%)
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LL AT ++T F ++ L++DEAD IL G+E ++ + +++L K++ +
Sbjct: 292 LLVATPGRLLDHLQNTPGFLFHNLQMLIIDEADAILKVGFEEEMNQIIKLLPKERV---T 348
Query: 232 VLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
L SAT+T V+ L ++L+NP+ I+ S D + +T S +L+Q ++V P +
Sbjct: 349 CLFSATMTKKVEDLCRLSLKNPVLIEV--SKDSNTSTVS-----NLEQGYVVIDPAKKFQ 401
Query: 292 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
L +F+ ++ + K++VFM++ + ++++LL+
Sbjct: 402 LLFTFL-------KKNLKKKVMVFMSSCNAVKFYSDLLN 433
>gi|294932648|ref|XP_002780372.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
gi|239890305|gb|EER12167.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
Length = 566
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 297/569 (52%), Gaps = 64/569 (11%)
Query: 352 KKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMN 411
++ E K IS++ Q+ D N P+ + + F+ + + P +K+ L +
Sbjct: 37 QRKEEKEAKISAIRQSAADADNAPSGK-----KGFFSDKKFTDLQICDP-LKEALT-ACS 89
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +T +Q +I +L G DVL ++TGSGKTLA+ +P ++ L R K+G +I
Sbjct: 90 FTTMTDIQAKAIPLMLKGKDVLGAAKTGSGKTLAFLVPALELLVATR--FQPKNGTGVMI 147
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGRLL 529
I PTRELA+Q ++ +L S T + ++ + GG K+E ++ +GI+ILVATPGRLL
Sbjct: 148 ISPTRELAMQIFDVCKRLVDS-TKLSQTYGIVMGGVNRKNEADKLSRGINILVATPGRLL 206
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T ++ + LV+DEADRIL G+E D+ + L+IL K++ Q+ L SAT T
Sbjct: 207 DHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKR---QTSLFSATQTQK 263
Query: 590 VQRLAGMTLQNPI--QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V LA ++L+ PI Q AD +T LV Q ++V RL L +F+
Sbjct: 264 VNDLARLSLKKPIFVQSKGADDDAAISTASGLV------QGYVVVGGDDRLRLLFTFL-- 315
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++++ K++VF ++ + +H ELL+ + +I +HG QS R F F
Sbjct: 316 -----KKNQKKKVMVFFSSCNSVKFHDELLNYI---DIPVISIHGQKKQSARMTNFYRFC 367
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLFLI 765
++SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G EG+ +LLFL+
Sbjct: 368 QMESGILLCTDVAARGLDIPKVDWIVQYDPPDDPKEYIHRVGRTAR-GAEGTGKALLFLM 426
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATA-LQMSFES 824
P E+ + L+ + ++ L + A A +Q E
Sbjct: 427 PEELGFLRYLR-----------------------KSGVTTLNEYVFPPAKVANIQHQLEK 463
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI 884
V LH ++ Y S++ YA+++ + F+ + L AK F P V +
Sbjct: 464 LVESNYHLHRASRDAYRSYLHAYAAHAS--KDCFDVHSLDLQKLAKCFGFAVPPKVDLNL 521
Query: 885 GKPKNKEELKNKKMAINKEKSFKQRGNFS 913
K K + +KM + + K +G+FS
Sbjct: 522 -KDTKKSDRGGRKM-VKSGRFNKGQGDFS 548
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 114/179 (63%), Gaps = 8/179 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q +I +L G DVL ++TGSGKTLA+ +P ++ L R K+G +
Sbjct: 89 SFTTMTDIQAKAIPLMLKGKDVLGAAKTGSGKTLAFLVPALELLVATR--FQPKNGTGVM 146
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGRL 119
II PTRELA+Q ++ +L S T + ++ + GG K+E ++ +GI+ILVATPGRL
Sbjct: 147 IISPTRELAMQIFDVCKRLVDS-TKLSQTYGIVMGGVNRKNEADKLSRGINILVATPGRL 205
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LDH ++T ++ + LV+DEADRIL G+E D+ + L+IL K++ Q+ L SAT T
Sbjct: 206 LDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKR---QTSLFSATQT 261
>gi|407409722|gb|EKF32442.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 612
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 279/560 (49%), Gaps = 69/560 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLN--------EGMNITQVTTVQQLSIQPILD 428
R +KPV +A AP E + + NLN ++T +Q + L
Sbjct: 96 RSVKPV-DATRAPKQRERTTCVSDYKALNLNPHIVTALENDFKFGELTGIQGRCVPAALS 154
Query: 429 GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTK 488
G D+L ++TGSGKTLA+ IPI++ + R K+G AVII PTREL LQ + K
Sbjct: 155 GRDLLAEAKTGSGKTLAFLIPIVEIIS--RAGFRPKNGTAAVIIGPTRELCLQIEGVLLK 212
Query: 489 LCKSFTW-IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLV 547
L K F I GG+ E ++ G+ I++A+PGRLLDH K T + L
Sbjct: 213 LLKHFNGSITFLCCIGGQSRNQEAFKLVNGMMIVIASPGRLLDHLKLTTDWLTKNLLVLA 272
Query: 548 LDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAA 607
+DEADR+LD G+E D+ E + +L K++ Q+ L SAT T V++LA ++ P + +
Sbjct: 273 VDEADRVLDNGFEEDMREIVSLLPKKR---QTFLFSATQTTRVEQLARISFYRPPLLISM 329
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQ 667
+ T D+L +Q +++ P + RL+ L F V + + KM+VF +++
Sbjct: 330 KRREEKATVDTL------EQGYVMCPSEQRLLVLYHF-------VKRNLKKKMIVFFSSR 376
Query: 668 DMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLP 727
+ +H EL + + +AF HG Q +R+ + F + SGVL TDVAARGLD+P
Sbjct: 377 NAVSFHCELFNYIDVPCVAF---HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIP 433
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL-QNRRIRIEEIK 786
VDWIVQ+ P YVHRVGRTAR G G++L+FL+P E ++ L + + + E
Sbjct: 434 HVDWIVQFDPPDDPVKYVHRVGRTARAGRCGNALMFLLPQEKLFLKYLYDDAHVTVSEYT 493
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
DLS++ G E E V L TSA + Y ++
Sbjct: 494 F--------------DLSKVKQGVCE--------QLEQLVSTNYYLRTSARQAYEGYLLS 531
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP------KNKEELKN----- 895
Y+ S L+++F+ + L AK FAL + P + + + K + E ++
Sbjct: 532 YS--SSQLKNVFDIHNLDLAAVAKGFALSEPPPLKLDLSQSAAHMSKKTRREFRHMKEAK 589
Query: 896 --KKMAINKEKSFKQRGNFS 913
++ A+N+E K++ N S
Sbjct: 590 DKRRRAVNEETLKKRKSNIS 609
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q + L G D+L ++TGSGKTLA+ IPI++ + R K+G AVII
Sbjct: 140 ELTGIQGRCVPAALSGRDLLAEAKTGSGKTLAFLIPIVEIIS--RAGFRPKNGTAAVIIG 197
Query: 65 PTRELALQTLEIFTKLCKSFTW-IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + KL K F I GG+ E ++ G+ I++A+PGRLLDH
Sbjct: 198 PTRELCLQIEGVLLKLLKHFNGSITFLCCIGGQSRNQEAFKLVNGMMIVIASPGRLLDHL 257
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L K++ Q+ L SAT T
Sbjct: 258 KLTTDWLTKNLLVLAVDEADRVLDNGFEEDMREIVSLLPKKR---QTFLFSATQT 309
>gi|75328082|sp|Q84T03.1|RH27_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 27
gi|29150366|gb|AAO72375.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|108711610|gb|ABF99405.1| ATP-dependent RNA helicase C1F7.02c, putative, expressed [Oryza
sativa Japonica Group]
gi|125588287|gb|EAZ28951.1| hypothetical protein OsJ_12997 [Oryza sativa Japonica Group]
Length = 590
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 275/522 (52%), Gaps = 62/522 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L ++G
Sbjct: 114 MNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAH--FMPRNGTGV 171
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELA+QT + +L K + + ++ GG + E ++ KG+++LVATPGRLL
Sbjct: 172 VVVCPTRELAIQTHNVAKELMKYHSQTL-GYIIGGNGRRGEADQLAKGVNLLVATPGRLL 230
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + +++ L++DEADR+L+Q +E D+ + I K+ Q++L SAT T
Sbjct: 231 DHLQNTKGFIYRRLKCLIIDEADRLLEQNFEEDMKQ---IFKRLPLNRQTVLFSATQTEQ 287
Query: 590 VQRLAGMTLQN-------PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
V+ A ++ + P+ + D+ T++ V + L+Q + V R + L
Sbjct: 288 VKEFAKLSFEKNEESTSKPVYVGVDDAE-----TNATV--EGLQQGYCVIDSARRFLVLY 340
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F L K QN K++VF ++ + +H ELL+ + I +HG Q +RT
Sbjct: 341 AF-LKKKQN------KKVMVFFSSCNSVKFHAELLNFL---QIECSDIHGKQKQQKRTTT 390
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
F F + G+L+CT+VAARGLD+P VD+IVQY P DY+HRVGRTAR +G +L
Sbjct: 391 FFNFCKAEKGILLCTNVAARGLDIPDVDFIVQYDPPDEPKDYIHRVGRTARGEKGKGEAL 450
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL+P E+K + L+ +I + E+ E LQ
Sbjct: 451 LFLLPQELKFLIYLKAAKISLTELVFN-----------------------ENKVPNLQSH 487
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E+ V + L+ SA + Y S++ Y S+S ++ IF+ ++L A SF ++ P V
Sbjct: 488 LENIVGENYFLNQSAKEAYRSYILAYDSHS--MKDIFDVHNLNLKDVAASFCFKNPPKVN 545
Query: 882 SGIGKPKNKEELKNKKM------AINKEKSFKQRGNFSKKQM 917
+ +K K +K+ I+ + ++G K+Q
Sbjct: 546 IDLESSASKHRRKMRKVDGGRRHGISAANPYGRKGGDDKRQF 587
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 148/277 (53%), Gaps = 30/277 (10%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L ++G
Sbjct: 114 MNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAH--FMPRNGTGV 171
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELA+QT + +L K + + ++ GG + E ++ KG+++LVATPGRLL
Sbjct: 172 VVVCPTRELAIQTHNVAKELMKYHSQTL-GYIIGGNGRRGEADQLAKGVNLLVATPGRLL 230
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + +++ L++DEADR+L+Q +E D+ +I K+ Q++L SAT T
Sbjct: 231 DHLQNTKGFIYRRLKCLIIDEADRLLEQNFEEDMK---QIFKRLPLNRQTVLFSATQTE- 286
Query: 181 TCWCKHTETLKFSKVE-------HLVLDEAD-----RILDQGY-----ERDIAEFLEILK 223
K L F K E ++ +D+A+ L QGY R LK
Sbjct: 287 --QVKEFAKLSFEKNEESTSKPVYVGVDDAETNATVEGLQQGYCVIDSARRFLVLYAFLK 344
Query: 224 KQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAAD 260
K++ + V S+ + L N +QI+ +D
Sbjct: 345 KKQNKKVMVFFSSCNSVKFH----AELLNFLQIECSD 377
>gi|125546083|gb|EAY92222.1| hypothetical protein OsI_13943 [Oryza sativa Indica Group]
Length = 591
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 275/522 (52%), Gaps = 62/522 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L ++G
Sbjct: 115 MNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAH--FMPRNGTGV 172
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELA+QT + +L K + + ++ GG + E ++ KG+++LVATPGRLL
Sbjct: 173 VVVCPTRELAIQTHNVAKELMKYHSQTL-GYIIGGNGRRGEADQLAKGVNLLVATPGRLL 231
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + +++ L++DEADR+L+Q +E D+ + I K+ Q++L SAT T
Sbjct: 232 DHLQNTKGFIYRRLKCLIIDEADRLLEQNFEEDMKQ---IFKRLPLNRQTVLFSATQTEQ 288
Query: 590 VQRLAGMTLQN-------PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
V+ A ++ + P+ + D+ T++ V + L+Q + V R + L
Sbjct: 289 VKEFAKLSFEKNEESTSKPVYVGVDDAE-----TNATV--EGLQQGYCVIDSARRFLVLY 341
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F L K QN K++VF ++ + +H ELL+ + I +HG Q +RT
Sbjct: 342 AF-LKKKQN------KKVMVFFSSCNSVKFHAELLNFL---QIECSDIHGKQKQQKRTTT 391
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
F F + G+L+CT+VAARGLD+P VD+IVQY P DY+HRVGRTAR +G +L
Sbjct: 392 FFNFCKAEKGILLCTNVAARGLDIPDVDFIVQYDPPDEPKDYIHRVGRTARGEKGKGEAL 451
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL+P E+K + L+ +I + E+ E LQ
Sbjct: 452 LFLLPQELKFLIYLKAAKISLTELVFN-----------------------ENKVPNLQSH 488
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E+ V + L+ SA + Y S++ Y S+S ++ IF+ ++L A SF ++ P V
Sbjct: 489 LENIVGENYFLNQSAKEAYRSYILAYDSHS--MKDIFDVHNLNLKDVAASFCFKNPPKVN 546
Query: 882 SGIGKPKNKEELKNKKM------AINKEKSFKQRGNFSKKQM 917
+ +K K +K+ I+ + ++G K+Q
Sbjct: 547 IDLESSASKHRRKMRKVDGGRRHGISAANPYGRKGGDDKRQF 588
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 148/277 (53%), Gaps = 30/277 (10%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI +L+G DV+ ++TGSGKTLA+ IP I+ L ++G
Sbjct: 115 MNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAH--FMPRNGTGV 172
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELA+QT + +L K + + ++ GG + E ++ KG+++LVATPGRLL
Sbjct: 173 VVVCPTRELAIQTHNVAKELMKYHSQTL-GYIIGGNGRRGEADQLAKGVNLLVATPGRLL 231
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + +++ L++DEADR+L+Q +E D+ +I K+ Q++L SAT T
Sbjct: 232 DHLQNTKGFIYRRLKCLIIDEADRLLEQNFEEDMK---QIFKRLPLNRQTVLFSATQTE- 287
Query: 181 TCWCKHTETLKFSKVE-------HLVLDEAD-----RILDQGY-----ERDIAEFLEILK 223
K L F K E ++ +D+A+ L QGY R LK
Sbjct: 288 --QVKEFAKLSFEKNEESTSKPVYVGVDDAETNATVEGLQQGYCVIDSARRFLVLYAFLK 345
Query: 224 KQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAAD 260
K++ + V S+ + L N +QI+ +D
Sbjct: 346 KKQNKKVMVFFSSCNSVKFH----AELLNFLQIECSD 378
>gi|320586265|gb|EFW98944.1| dead box ATP-dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 623
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 264/478 (55%), Gaps = 58/478 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ ++ P+L G DVL ++TGSGKTLA+ IP ++ L + K ++G+
Sbjct: 152 MGFETMTAIQRRALPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLFAL--KFKPRNGVGV 209
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELALQ + +L T + GG ++E ++ +G+++LVATPGRLL
Sbjct: 210 VVVTPTRELALQIWGVAQELMAHHTQTT-GIVMGGANRRAEAEKLGRGVNLLVATPGRLL 268
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + + L++DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T
Sbjct: 269 DHLQNTPNFLYKHLRSLIIDEADRILEVGFEDELRQIIKILPKER---QTMLFSATQTQK 325
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI--- 645
+ LA ++L+ NP+ ++ ++ D L+Q ++V + R + L SF+
Sbjct: 326 IDDLAKVSLRANPLYLNVDEAQQFSTV-------DGLEQGYVVCGSQDRFLLLWSFLKRM 378
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV-LGENIAFFKLHGSMSQSERTEVFK 704
GK K++VF ++ + YH +LL + LG LHG Q++RT F
Sbjct: 379 AGK---------KKVIVFFSSCNSVKYHADLLRYIDLG---GVLDLHGKQKQAKRTSTFF 426
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLL 762
F + + G+L+CTDVAARGLD+P VDWIVQ+ P YVHRVGRTAR G E G SLL
Sbjct: 427 EFCNAEQGILLCTDVAARGLDIPAVDWIVQFDPPDDGRAYVHRVGRTAR-GTEGRGKSLL 485
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL+PSEV + L+ R+ + V+ E S++ + +Q
Sbjct: 486 FLLPSEVGFLAYLREARVPV--------------VEYEFPTSKVRN---------VQAQL 522
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E + Q LH SA G+ +++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 523 EKLLAQNYYLHQSAKDGFRAYLHAYASHS--LRSVFDVHKLDLTAVAKSFGFSKPPRV 578
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ ++ P+L G DVL ++TGSGKTLA+ IP ++ L + K ++G+
Sbjct: 152 MGFETMTAIQRRALPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLFAL--KFKPRNGVGV 209
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELALQ + +L T + GG ++E ++ +G+++LVATPGRLL
Sbjct: 210 VVVTPTRELALQIWGVAQELMAHHTQTT-GIVMGGANRRAEAEKLGRGVNLLVATPGRLL 268
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + + L++DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T
Sbjct: 269 DHLQNTPNFLYKHLRSLIIDEADRILEVGFEDELRQIIKILPKER---QTMLFSATQT 323
>gi|409083067|gb|EKM83424.1| hypothetical protein AGABI1DRAFT_110091 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 513
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 262/484 (54%), Gaps = 48/484 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q SI +L G DVL ++TGSGKTLA+ IP + L ++ K GI +II P
Sbjct: 1 MTPIQSKSIPLLLAGKDVLGAARTGSGKTLAFLIPAAELLHRLKFKPMNGTGI--IIISP 58
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELALQ + L + + GG ++E ++ KG+++LVATPGRLLDH ++
Sbjct: 59 TRELALQIFGVAKDLMAHHSQTF-GIIMGGANRRAEADKLVKGVNLLVATPGRLLDHLEN 117
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T+ F ++ LV+DEADRIL+ G+E ++ + + IL + Q S+L SAT T VQ LA
Sbjct: 118 TKGFIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDRQ--SMLFSATQTTKVQDLA 175
Query: 595 GMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
++L+ P+ +D D T ++ +L Q ++V P R + L +F+
Sbjct: 176 RVSLRPGPVYVD----VDKEEATSTV---STLSQGYVVCPSDRRFLLLFTFL-------K 221
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
++ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F + +SG+
Sbjct: 222 KNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLDLHGKQKQQKRTNTFFEFCNAESGI 278
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR G G SLLFL+ SE+ +
Sbjct: 279 LLCTDVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRTARAGKVGKSLLFLLESELGFLR 338
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++ + E ++A+ +Q E + + LH
Sbjct: 339 YLKEAKVPLNEFSFP--------------TEKIAN---------VQSQLEKLLQKNYFLH 375
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
SA G+ ++++ YASYS L+ IF+ Q+ L K+F P V IG +
Sbjct: 376 KSAKDGFRAYLQSYASYS--LKKIFDVNQLDLAKVGKAFGFAVPPRVNVNIGPGRGTSNA 433
Query: 894 KNKK 897
KK
Sbjct: 434 TQKK 437
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 106/173 (61%), Gaps = 5/173 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI +L G DVL ++TGSGKTLA+ IP + L ++ K GI +II P
Sbjct: 1 MTPIQSKSIPLLLAGKDVLGAARTGSGKTLAFLIPAAELLHRLKFKPMNGTGI--IIISP 58
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELALQ + L + + GG ++E ++ KG+++LVATPGRLLDH ++
Sbjct: 59 TRELALQIFGVAKDLMAHHSQTF-GIIMGGANRRAEADKLVKGVNLLVATPGRLLDHLEN 117
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T+ F ++ LV+DEADRIL+ G+E ++ + + IL + QS+L SAT T
Sbjct: 118 TKGFIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDR--QSMLFSATQT 168
>gi|157876832|ref|XP_001686758.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
gi|68129833|emb|CAJ09139.1| putative DEAD box RNA helicase [Leishmania major strain Friedlin]
Length = 657
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 266/508 (52%), Gaps = 50/508 (9%)
Query: 376 TRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVR 435
T+R K +++++ A T Y+ ++P + L + ++T +Q I L G D+L
Sbjct: 148 TQRNKELAKSIPAVTDYKSLQ-LNPHIVSALEQEFKFKELTPIQSRCIPAALQGRDLLAE 206
Query: 436 SQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTW 495
++TG+GKTLA+ IPI++ + R +G A+II PTREL LQ + KL K F
Sbjct: 207 AKTGAGKTLAFLIPIVEIV--CRSGFRPSNGTAAIIIGPTRELCLQIEGVLLKLLKHFNG 264
Query: 496 IVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRI 554
+ GG+ E ++ GI I+VA+PGRLLDH K T + L +DEADR+
Sbjct: 265 SLTFLCCIGGQSRNQEGFKLANGIMIVVASPGRLLDHLKLTTDWHTKNLLLLAVDEADRV 324
Query: 555 LDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQIDAADSTDIH 613
LD G+E D+ E + +L K + Q+ L SAT T V++LA ++ + PI I D
Sbjct: 325 LDNGFEEDMREIVALLPKNR---QTFLFSATQTTRVEQLARISFHKTPIFISMKSKKDKA 381
Query: 614 NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYH 673
D+L+Q ++V + RL+ L F V ++ + K++VF ++++ +H
Sbjct: 382 TV-------DTLEQGYVVCTSEQRLLVLYHF-------VKKNLKKKVIVFFSSRNSVSFH 427
Query: 674 TELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIV 733
EL + + IAF HG Q +R+ + F + SGVL TDVAARGLD+P VDWIV
Sbjct: 428 CELFNYIDVPCIAF---HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPEVDWIV 484
Query: 734 QYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL-QNRRIRIEEIKLKDCLQ 792
Q+ P YVHRVGRTAR G G++L+FL+P E ++ L + ++++ E
Sbjct: 485 QFDPPDDPVKYVHRVGRTARAGRCGNALMFLLPQEELFLKYLYDDAKVKVNEYIF----- 539
Query: 793 NLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSK 852
DL++L + +Q E V L TSA + Y ++ Y+S
Sbjct: 540 ---------DLTKLKEN--------VQGQLEQLVSSNYYLRTSARQAYEGYLLSYSSC-- 580
Query: 853 DLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+++FN + + L A+ FAL + P +
Sbjct: 581 QLKNVFNIQHLDLAAVARGFALSEPPPI 608
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q I L G D+L ++TG+GKTLA+ IPI++ + R +G A+II
Sbjct: 185 ELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIV--CRSGFRPSNGTAAIIIG 242
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + KL K F + GG+ E ++ GI I+VA+PGRLLDH
Sbjct: 243 PTRELCLQIEGVLLKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGIMIVVASPGRLLDHL 302
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L K + Q+ L SAT T
Sbjct: 303 KLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNR---QTFLFSATQT 354
>gi|401420082|ref|XP_003874530.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490766|emb|CBZ26030.1| putative DEAD box RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 658
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/517 (33%), Positives = 270/517 (52%), Gaps = 52/517 (10%)
Query: 369 PDIPNVPT--RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
PD P + +R K +++++ A T Y+ ++P + L + ++T +Q I
Sbjct: 140 PDGPTAVSMMQRSKELAKSIPAVTDYKSLQ-LNPHIVSALEQEFKFRELTPIQSRCIPAA 198
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G D+L ++TG+GKTLA+ IPI++ + R +G A+II PTREL LQ +
Sbjct: 199 LQGRDLLAEAKTGAGKTLAFLIPIVEIV--CRSGFRPSNGTAAIIIGPTRELCLQIEGVL 256
Query: 487 TKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
KL K F + GG+ E ++ G+ I+VA+PGRLLDH K T +
Sbjct: 257 LKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLLDHLKLTTDWHTKNLLL 316
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQI 604
L +DEADR+LD G+E D+ E + +L K + Q+ L SAT T V++LA ++ + PI I
Sbjct: 317 LAVDEADRVLDNGFEEDMREIVALLPKNR---QTFLFSATQTTRVEQLARISFHKTPIFI 373
Query: 605 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
D D+L+Q ++V + RL+ L F V ++ + K++VF
Sbjct: 374 SMKSKKDKATV-------DTLEQGYVVCASEQRLLVLYHF-------VKKNLKKKVIVFF 419
Query: 665 ATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
++++ +H EL + + IAF HG Q +R+ + F + SGVL TDVAARGL
Sbjct: 420 SSRNSVSFHCELFNYIDVPCIAF---HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGL 476
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL-QNRRIRIE 783
D+P VDWIVQ+ P YVHRVGRTAR G G++L+FL+P E ++ L + ++++
Sbjct: 477 DIPEVDWIVQFDPPDDPVKYVHRVGRTARAGRCGNALMFLLPQEELFLKYLYDDAKVKVN 536
Query: 784 EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSW 843
E D++++ GNV Q E V L TSA + Y +
Sbjct: 537 EYTF--------------DMTKI-KGNV-------QGQLEQLVGTNYYLRTSARQAYEGY 574
Query: 844 VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ Y+S L+++FN + + L A+ FAL + P +
Sbjct: 575 LLSYSSC--QLKNVFNIQNLDLAAVARGFALSEPPPI 609
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q I L G D+L ++TG+GKTLA+ IPI++ + R +G A+II
Sbjct: 186 ELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIV--CRSGFRPSNGTAAIIIG 243
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + KL K F + GG+ E ++ G+ I+VA+PGRLLDH
Sbjct: 244 PTRELCLQIEGVLLKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLLDHL 303
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L K + Q+ L SAT T
Sbjct: 304 KLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNR---QTFLFSATQT 355
>gi|169852452|ref|XP_001832910.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130]
gi|116506045|gb|EAU88940.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130]
Length = 640
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 267/495 (53%), Gaps = 58/495 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T++Q SI +L G DVL ++TGSGKTLA+ IP ++ L ++ K GI
Sbjct: 123 MGFETMTSIQAKSIPVLLAGKDVLGAARTGSGKTLAFLIPAVELLHRLKFKPVNGTGI-- 180
Query: 470 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+I+ PTRELALQ + L ++F ++ GG K+E ++ KG+++LVATP
Sbjct: 181 IILTPTRELALQIFGVAKDLMAYHSQTFGVVI-----GGANPKAEVDKLSKGVNLLVATP 235
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++ + + + LV+DEADRIL+ G+E ++ + IL + QS+L SAT
Sbjct: 236 GRLLDHLQNAKGFVYRNLRALVIDEADRILEIGFEEEMKRIISILPNE--NRQSMLFSAT 293
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V LA ++L+ P+ +D D T ++ +L Q ++V +R L +F
Sbjct: 294 QTTKVTDLARISLRPGPVHVD----VDKEEATSTV---STLSQGYVVCSSDMRFRLLYTF 346
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F
Sbjct: 347 L-------KKNLKKKVIVFFSSCNSVKYHAELLNYI---DVPVLDLHGKQKQMKRTNTFF 396
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
F + +SG+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR G G SLLFL
Sbjct: 397 EFINAESGILLCTDVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRTARAGKVGKSLLFL 456
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
+ SE+ + L++ ++ + E R+A+ +Q E
Sbjct: 457 LESELGFLRYLKDAKVPLNEYSFP--------------AERIAN---------IQTQLEK 493
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV--IS 882
+ + LH SA G+ S+++ YASYS L+ I++ ++ L KSF P V +
Sbjct: 494 LLQKNYFLHKSAKDGFRSYLQSYASYS--LKKIYDVNKLDLAKVGKSFGFATPPRVNLVV 551
Query: 883 GIGKPKNKEELKNKK 897
G G K + K K+
Sbjct: 552 GPGGGKGNQAKKRKR 566
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 109/182 (59%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T++Q SI +L G DVL ++TGSGKTLA+ IP ++ L ++ K GI
Sbjct: 123 MGFETMTSIQAKSIPVLLAGKDVLGAARTGSGKTLAFLIPAVELLHRLKFKPVNGTGI-- 180
Query: 61 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+I+ PTRELALQ + L ++F ++ GG K+E ++ KG+++LVATP
Sbjct: 181 IILTPTRELALQIFGVAKDLMAYHSQTFGVVI-----GGANPKAEVDKLSKGVNLLVATP 235
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++ + + + LV+DEADRIL+ G+E ++ + IL + QS+L SAT
Sbjct: 236 GRLLDHLQNAKGFVYRNLRALVIDEADRILEIGFEEEMKRIISILPNE--NRQSMLFSAT 293
Query: 177 LT 178
T
Sbjct: 294 QT 295
>gi|254573064|ref|XP_002493641.1| Putative nucleolar DEAD box RNA helicase [Komagataella pastoris
GS115]
gi|238033440|emb|CAY71462.1| Putative nucleolar DEAD box RNA helicase [Komagataella pastoris
GS115]
gi|328354532|emb|CCA40929.1| RNA Helicase [Komagataella pastoris CBS 7435]
Length = 766
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 251/472 (53%), Gaps = 45/472 (9%)
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
G + ++T +Q+ +I P L G D+L ++TGSGKTLA+ IP+I+ L +R + DG+
Sbjct: 59 GAHFIEMTGIQKEAIPPALQGQDILGAAKTGSGKTLAFLIPLIEML--LREDWNEFDGVG 116
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+II PTRELA+Q E+ + K ++ + GG+ K E RI K I++L+ TPGRL
Sbjct: 117 ALIISPTRELAMQIYEVLLNIGKHSSFSC-GLVIGGKDFKYESERIGK-INVLIGTPGRL 174
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
L H + L + ++ L+LDEADRILD G+++ + I+ PQ Q++L SAT T
Sbjct: 175 LQHMDQSANLNINNLQMLILDEADRILDMGFKKTLDS---IISSIPPQRQTLLFSATQTK 231
Query: 589 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+VQ LA ++L NP I+++ D L PDSL+Q +IV P ++ L SFI
Sbjct: 232 SVQDLARLSLTNPKYINSSSDLD-------LATPDSLEQSYIVVPLNEKINTLWSFIKTH 284
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ SK+LVF+++ + E L I+ KLHG Q+ R E F
Sbjct: 285 LK-------SKILVFLSSSKQVHFLYEAFRK-LQPGISLMKLHGRQKQTARIETTVKFSH 336
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+ L TDV ARGLD P +DW+VQ P ++ Y+HRVGR AR G EG SLL L PSE
Sbjct: 337 AQHCCLFATDVVARGLDFPAIDWVVQLDCPEDASTYIHRVGRCARAGKEGKSLLILTPSE 396
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
EE RR+ + IK N+ + + G + +E AL F+S L
Sbjct: 397 ----EEAFVRRLEAKNIK------NISKLNVRGAKKK----TIEPQMQAL--CFKSPEL- 439
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K L A Y F + + + + +F +++ + +AKS L AP +
Sbjct: 440 -KYLGQKAFIAY-----FKSVFIQKDKEVFQVQKLPVEEYAKSLGLPGAPKI 485
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 109/174 (62%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ +I P L G D+L ++TGSGKTLA+ IP+I+ L +R + DG+ A+II
Sbjct: 64 EMTGIQKEAIPPALQGQDILGAAKTGSGKTLAFLIPLIEML--LREDWNEFDGVGALIIS 121
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ + K ++ + GG+ K E RI K I++L+ TPGRLL H
Sbjct: 122 PTRELAMQIYEVLLNIGKHSSFSC-GLVIGGKDFKYESERIGK-INVLIGTPGRLLQHMD 179
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ L + ++ L+LDEADRILD G+++ + I+ PQ Q++L SAT T
Sbjct: 180 QSANLNINNLQMLILDEADRILDMGFKKTLD---SIISSIPPQRQTLLFSATQT 230
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
+ L + ++ L+LDEADRILD G+++ + I+ PQ Q++L SAT T +VQ L
Sbjct: 180 QSANLNINNLQMLILDEADRILDMGFKKTLDS---IISSIPPQRQTLLFSATQTKSVQDL 236
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L NP I+++ D L PDSL+Q +IV P ++ L SFI +
Sbjct: 237 ARLSLTNPKYINSSSDLD-------LATPDSLEQSYIVVPLNEKINTLWSFIKTHLK--- 286
Query: 306 EDEESKMLVFMAT 318
SK+LVF+++
Sbjct: 287 ----SKILVFLSS 295
>gi|358340252|dbj|GAA48186.1| ATP-dependent RNA helicase DDX18/HAS1 [Clonorchis sinensis]
Length = 817
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 288/535 (53%), Gaps = 56/535 (10%)
Query: 366 QNNPDIPNVPTR-RLK--PVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLS 422
Q P P+V +R R++ P SE L + + + P P + N M ++T +Q+L
Sbjct: 314 QVKPSTPDVSSRERIEQLPGSELLLSGL-FADLPVSEPIKRAVAN--MGFKEMTEIQKLC 370
Query: 423 IQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQT 482
+ +L+ DV+ ++TGSGKTLA+ IP+++ + ++ + ++G A+II PTREL+LQT
Sbjct: 371 LPQLLEHRDVMACAKTGSGKTLAFVIPVVELMLQL--GLQPRNGTGAIIISPTRELSLQT 428
Query: 483 LEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSK 542
+ ++ + FT + + GG +E + KG++ILVATPGRLLDH +T+
Sbjct: 429 YSVLREVTQ-FTSLRIGLIMGGSNRHTEVQNLEKGVTILVATPGRLLDHLTNTKNFLRHN 487
Query: 543 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPI 602
++ LV+DEADR+LD G+E ++ + + +L + Q++L SATL + LA + +
Sbjct: 488 LKVLVIDEADRMLDIGFEVEMRQIIRLLPSVR---QTMLFSATLNEKTRHLA----KEAL 540
Query: 603 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 662
+ D A + D+ V + L+Q ++V P+ R L +FI +++ K++V
Sbjct: 541 KTDCA-MIGLQPEGDATV--EGLEQGYVVCAPEKRFCLLYTFI-------KKNKNKKVMV 590
Query: 663 FMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAAR 722
FM++ ++ ELL+ V + +HG Q++RT F F +S VL+CTDV AR
Sbjct: 591 FMSSCMEVKFYYELLNFV---DTPVMAIHGRQKQAKRTSTFLNFIKAESAVLLCTDVGAR 647
Query: 723 GLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRI 782
GLD+P VDWI+QY P + +Y+HRVGRTAR G EG++LL L P E++ + L+ R+++
Sbjct: 648 GLDIPKVDWILQYDPPDEAKEYIHRVGRTARAGSEGNALLVLRPHELEFLAILRQARVKV 707
Query: 783 EEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTS 842
E ++ S+LAD +Q + E V L SA + +
Sbjct: 708 VEYEMAQ--------------SKLAD---------VQPALEKLVSTNYFLALSAQEAFKG 744
Query: 843 WVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
VR YAS S FN Q+ L A++ L+ P V + KP+ + L K
Sbjct: 745 IVRAYASSSLP---CFNVDQLDLAALARTCGLQVVPKVDLMV-KPRKSKGLSGSK 795
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 115/181 (63%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q+L + +L+ DV+ ++TGSGKTLA+ IP+++ + ++ + ++G A
Sbjct: 358 MGFKEMTEIQKLCLPQLLEHRDVMACAKTGSGKTLAFVIPVVELMLQL--GLQPRNGTGA 415
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+LQT + ++ + FT + + GG +E + KG++ILVATPGRLL
Sbjct: 416 IIISPTRELSLQTYSVLREVTQ-FTSLRIGLIMGGSNRHTEVQNLEKGVTILVATPGRLL 474
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +T+ ++ LV+DEADR+LD G+E ++ + + +L + Q++L SATL
Sbjct: 475 DHLTNTKNFLRHNLKVLVIDEADRMLDIGFEVEMRQIIRLLPSVR---QTMLFSATLNEK 531
Query: 181 T 181
T
Sbjct: 532 T 532
>gi|171677075|ref|XP_001903489.1| hypothetical protein [Podospora anserina S mat+]
gi|170936605|emb|CAP61264.1| unnamed protein product [Podospora anserina S mat+]
Length = 580
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 259/471 (54%), Gaps = 50/471 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 112 EEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSLRFK--PRNGT 169
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + +L K + GG ++E ++ KG+++L+ATPGR
Sbjct: 170 GVIVVTPTRELALQIFGVARELMKHHSQTY-GVCIGGANRRAEADKLGKGVNLLIATPGR 228
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL K + Q++L SAT T
Sbjct: 229 LLDHLQNTPFV-FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKD--ERQTMLFSATQT 285
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ D ++T + + Q +++ R + L SF+
Sbjct: 286 TKVEDLARISLRPGPLYINV-DEEKQYSTVEGV------DQGYVIVDADKRFLLLFSFL- 337
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ + K++VF ++ + Y++ELL + ++ LHG Q +RT F F
Sbjct: 338 ------KKMSKKKVIVFFSSCNSVKYYSELLQYI---DLPVLDLHGKQKQQKRTNTFFEF 388
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLI 765
+ G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL
Sbjct: 389 CNATQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQ 448
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E +L+V Q E
Sbjct: 449 PCELGFLAHLKAAKVPVVEYDFPK--NKILNV---------------------QSQLEKL 485
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+ L+ SA GY S++ YAS+S LR +F+ ++ L AK + RD
Sbjct: 486 IGSNYYLNQSAKDGYRSYLHAYASHS--LRSVFDIHKLDLVKVAKVSSCRD 534
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 128/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 114 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSLRFK--PRNGTGV 171
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 172 IVVTPTRELALQIFGVARELMKHHSQTY-GVCIGGANRRAEADKLGKGVNLLIATPGRLL 230
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL K + Q++L SAT
Sbjct: 231 DHLQNTPFV-FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKD--ERQTMLFSATQTTK 287
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E ++S VE +DQGY
Sbjct: 288 VEDLARISLRPGPLYINVDEEKQYSTVEG---------VDQGY 321
>gi|253741685|gb|EES98549.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 625
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 284/560 (50%), Gaps = 58/560 (10%)
Query: 377 RRLKPVSE---ALF-APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDV 432
R + P+ E LF + S+ E GIH + + L I T +QQ +I IL G D+
Sbjct: 50 RSVAPIREQDGVLFESGKSFSEL-GIHEQICEILKSKFQIRNPTFIQQQAIPRILKGEDI 108
Query: 433 LVRSQTGSGKTLAYAIPIIQKL----QEMRPKISRKD--GIYAVIILPTRELALQTLEIF 486
++++QTGSGKTLA+ +PI+ KL Q+ P ++D +I+ PT+ELA+Q+ E+
Sbjct: 109 IIKAQTGSGKTLAFLLPILTKLFTDYQQRGPSSFKRDEWASKVLIVSPTKELAMQS-EMV 167
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
S T +V LTG EKA +RKGI+++ TPGR+ DH T K + ++ +
Sbjct: 168 AASLLSRTVMVSGSLTGAISRDKEKASLRKGITVISGTPGRIHDHLNQTACFKLTHIQAI 227
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA 606
VLDE D+++ G+ + L ++ P+ Q +L SAT V +++ I +
Sbjct: 228 VLDECDQLISHGFSSALQTILSHAREANPKVQVVLASATADRRVLDFIRSSVREAIPVG- 286
Query: 607 ADSTDIHNTTDSLVIPD----------SLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 656
D+ +T + + P+ SL Q F + P K+RL L S + + E +
Sbjct: 287 ----DLFSTNQAAIQPEAGLTKAVTPVSLDQRFCIVPSKMRLALLISTLAFETAKAAESK 342
Query: 657 ES-KMLVFMATQDMADYHTELLSTVLGENIA--------FFKLHGSMSQSERTEVFKTFR 707
+ ++LVF T+D+ E+L + ++ F LHGS+S +R V+ F
Sbjct: 343 TNIRVLVFAETKDVCTLLNEILMRLSEAEMSEDHFILAKVFHLHGSLSVEDRQVVWHRFL 402
Query: 708 SVKSGVLICTDVAARGLDLPL---------VDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
GVL+ TDVAARGL+L VD ++Q+ APSS YVHRVGR R+G G
Sbjct: 403 E-SGGVLVATDVAARGLNLGSGTASSGLFGVDLVIQFEAPSSCEQYVHRVGRAGRMGQRG 461
Query: 759 SSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATAL 818
S+LFL+ SE LV L + I + + + +L + RL + +
Sbjct: 462 RSILFLLESEADLVPLLGSYGIGLTATPVDALAERVLEYRKP---IRLME--------RV 510
Query: 819 QMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
Q E + K L A + ++ ++R Y+ S D+RH+FN K +HLGH AK F L +AP
Sbjct: 511 QTKVEELIANDKELRRMAVQAFSMYIRGYSMKSSDVRHVFNLKSLHLGHIAKGFGLSEAP 570
Query: 879 SVISGIGKPKNKEELKNKKM 898
S + +P +K ++K +M
Sbjct: 571 SKVLEEFRP-SKRQIKQARM 589
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 163/359 (45%), Gaps = 70/359 (19%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL----QEMRPKISRKD 56
I T +QQ +I IL G D+++++QTGSGKTLA+ +PI+ KL Q+ P ++D
Sbjct: 86 FQIRNPTFIQQQAIPRILKGEDIIIKAQTGSGKTLAFLLPILTKLFTDYQQRGPSSFKRD 145
Query: 57 --GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
+I+ PT+ELA+Q+ E+ S T +V LTG EKA +RKGI+++
Sbjct: 146 EWASKVLIVSPTKELAMQS-EMVAASLLSRTVMVSGSLTGAISRDKEKASLRKGITVISG 204
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGR+ DH T K + ++ +VLDE D+++ G+ + L ++ P+ Q +L S
Sbjct: 205 TPGRIHDHLNQTACFKLTHIQAIVLDECDQLISHGFSSALQTILSHAREANPKVQVVLAS 264
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
AT ADR + + E + + L
Sbjct: 265 AT--------------------------ADRRVLDFIRSSVREAIPVGD----------L 288
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
+T A+Q AG+T V P SL Q F + P K+RL L
Sbjct: 289 FSTNQAAIQPEAGLT--------------------KAVTPVSLDQRFCIVPSKMRLALLI 328
Query: 295 SFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEIPK 352
S + + E + + ++LVF T+D+ E+L +L E + D++ + K
Sbjct: 329 STLAFETAKAAESKTNIRVLVFAETKDVCTLLNEIL------MRLSEAEMSEDHFILAK 381
>gi|405969333|gb|EKC34309.1| ATP-dependent RNA helicase DDX18 [Crassostrea gigas]
Length = 578
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 265/483 (54%), Gaps = 58/483 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q +I +L+G D++ ++TGSGKTLA+ +P ++ L ++ K ++G
Sbjct: 76 MGFIHMTEIQANTIPHLLEGRDLMGAAKTGSGKTLAFLLPAVELLNKL--KFMPRNGTGC 133
Query: 470 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+II PTREL++QT + +L C ++ I+ GG E ++ KGI+ILVATP
Sbjct: 134 IIISPTRELSMQTFGVLKELLKYHCHTYGLIM-----GGTSRVEEAKKLGKGINILVATP 188
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++T + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT
Sbjct: 189 GRLLDHLQNTPNFMYKNLQCLIIDEADRILEIGFEEEMKQIMKLLPKRR---QTMLFSAT 245
Query: 586 LTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V+ L+ ++L+ P+ I D D + L+Q ++V P R + L +F
Sbjct: 246 QTRKVEDLSRISLKKEPLYIGVDDRKDSATV-------EGLEQGYVVCPSDKRFLLLFTF 298
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++ + K++VF ++ ++ ELL+ + +I +HG Q++RT+ F
Sbjct: 299 L-------KKNRKKKVMVFFSSCMAVKFYHELLNYI---DIPVMCIHGKQKQTKRTQTFF 348
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLF 763
F + K +L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL
Sbjct: 349 QFCNSKESILLCTDVAARGLDIPRVDWIVQYDPPDDPKEYIHRVGRTARGEGGVGHALLI 408
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L P E+ + L++ ++ + E D S N+ Q E
Sbjct: 409 LRPEELGFLRYLKHAKVPLNEF----------------DFSWSKISNI-------QAQLE 445
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+ + LH SA + Y S++R +AS+S L++I++ + L A SF + P V G
Sbjct: 446 KLIEKNYFLHKSAQEAYKSYIRAFASHS--LKNIYDVNTLDLQKVALSFGFHNPPYVDLG 503
Query: 884 IGK 886
+ +
Sbjct: 504 MSQ 506
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 115/182 (63%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q +I +L+G D++ ++TGSGKTLA+ +P ++ L ++ K ++G
Sbjct: 76 MGFIHMTEIQANTIPHLLEGRDLMGAAKTGSGKTLAFLLPAVELLNKL--KFMPRNGTGC 133
Query: 61 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+II PTREL++QT + +L C ++ I+ GG E ++ KGI+ILVATP
Sbjct: 134 IIISPTRELSMQTFGVLKELLKYHCHTYGLIM-----GGTSRVEEAKKLGKGINILVATP 188
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T + ++ L++DEADRIL+ G+E ++ + +++L K++ Q++L SAT
Sbjct: 189 GRLLDHLQNTPNFMYKNLQCLIIDEADRILEIGFEEEMKQIMKLLPKRR---QTMLFSAT 245
Query: 177 LT 178
T
Sbjct: 246 QT 247
>gi|170086121|ref|XP_001874284.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651836|gb|EDR16076.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 517
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 265/485 (54%), Gaps = 49/485 (10%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
G+ P + L++ M + +T+VQQ SI +L G D+L ++TGSGKTLA+ IP ++ L
Sbjct: 7 GLSPQTLQGLSD-MGFSTMTSVQQKSIPVLLAGKDLLGAARTGSGKTLAFLIPAVELLHR 65
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
++ K GI +II PTRELALQ + L + + GG +++E+ R+ K
Sbjct: 66 LKFKPMNGTGI--IIITPTRELALQIFGVAKDLMAHHSQTF-GIVIGGTSVRAERERLIK 122
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
G+++LVATPGRLLDH + + F ++ LV+DEADRIL+ G+E ++ + IL K+ Q
Sbjct: 123 GVNLLVATPGRLLDHLREAKGFVFRNLKGLVIDEADRILEVGFEEEMKSIISILPKEDRQ 182
Query: 577 FQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPK 635
++L SAT T V LA ++L+ PI ID D T ++ +L Q ++V P
Sbjct: 183 --TMLFSATQTTKVTDLARISLRPGPIHID----VDKEEATSTV---STLSQGYVVCPSD 233
Query: 636 LRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMS 695
R + L +F+ ++ + K++VF ++ + YH EL++ + ++ LHG
Sbjct: 234 RRFLLLYTFL-------KKNLKKKVIVFFSSCNSVKYHAELMNYI---DVPVLDLHGKQK 283
Query: 696 QSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVG 755
Q +RT F F + ++G+L T+VAARGLD+P VDWIVQ+ P DY+HRVGRTAR G
Sbjct: 284 QQKRTNTFFEFINAETGILFSTNVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRTARAG 343
Query: 756 HEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G SLLFL+ SE+ + L+ ++ + E R+A+
Sbjct: 344 KVGKSLLFLLESELGFLRYLKEAKVPLNEFSFP--------------ADRIAN------- 382
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q E + + LH SA G+ S+++ YASYS L+ IF+ + L K+F
Sbjct: 383 --VQSQLEKLLQKNYFLHQSAKDGFRSYLQAYASYS--LKKIFDVNALDLTKVGKAFGFS 438
Query: 876 DAPSV 880
P V
Sbjct: 439 VPPRV 443
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + +T+VQQ SI +L G D+L ++TGSGKTLA+ IP ++ L ++ K GI
Sbjct: 19 MGFSTMTSVQQKSIPVLLAGKDLLGAARTGSGKTLAFLIPAVELLHRLKFKPMNGTGI-- 76
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + L + + GG +++E+ R+ KG+++LVATPGRLL
Sbjct: 77 IIITPTRELALQIFGVAKDLMAHHSQTF-GIVIGGTSVRAERERLIKGVNLLVATPGRLL 135
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + + F ++ LV+DEADRIL+ G+E ++ + IL K+ Q++L SAT T
Sbjct: 136 DHLREAKGFVFRNLKGLVIDEADRILEVGFEEEMKSIISILPKEDR--QTMLFSATQT 191
>gi|168021219|ref|XP_001763139.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685622|gb|EDQ72016.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 265/493 (53%), Gaps = 52/493 (10%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
TS+E P P KN + + +T +Q SI +L G DVL ++TGSGKTL++ +P
Sbjct: 4 TSFESLPVSEP--TKNALKDTGFSHMTEIQARSIPQLLTGRDVLGAARTGSGKTLSFVVP 61
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
++ L ++G +II PTRELA+Q + + K + + GG ++
Sbjct: 62 AVELL--FHAHFMPRNGAGVIIISPTRELAMQIYGVARDILK-YHKQTHGIVMGGANRRT 118
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
E ++ KG++ LVATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++
Sbjct: 119 EAEKLAKGVNFLVATPGRLLDHLQNTKGFIFKNLKCLVIDEADRILEIGFEEEMKQIIKL 178
Query: 570 LKKQKPQFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L K++ Q++L SAT T V+ LA ++ + P+ I D S + L+Q
Sbjct: 179 LPKER---QTVLFSATQTTKVEDLARVSFKKAPLYIGVDDGR-------SKATVEGLEQG 228
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
+ V R + L +F+ ++ + K++VF ++ + +H+ELL+ + +I
Sbjct: 229 YCVVSSAERFLLLFTFL-------KKNLKKKIMVFFSSCNSVKFHSELLNYI---DIPCL 278
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
+HG Q +RT + F + + G+L+CTDVAARGLD+P VDWI+QY P +Y+HRV
Sbjct: 279 DIHGKQKQQKRTSTYFEFCNAEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRV 338
Query: 749 GRTARV-GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
GRTAR G +G +LLFLIP E+ ++ L+ ++ + E + +++A
Sbjct: 339 GRTARGEGSQGRALLFLIPEELGFLKYLKGAKVPLNEYEFPS--------------NKIA 384
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
+ +Q E V + LH SA Y S++ Y S++ ++ IFN ++ L
Sbjct: 385 N---------VQSQLEKLVEKNYYLHQSARDAYRSYLLAYNSHA--MKDIFNVHRLDLQA 433
Query: 868 FAKSFALRDAPSV 880
A SF P V
Sbjct: 434 VASSFGFSCPPKV 446
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ +T +Q SI +L G DVL ++TGSGKTL++ +P ++ L ++G +
Sbjct: 23 GFSHMTEIQARSIPQLLTGRDVLGAARTGSGKTLSFVVPAVELL--FHAHFMPRNGAGVI 80
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q + + K + + GG ++E ++ KG++ LVATPGRLLD
Sbjct: 81 IISPTRELAMQIYGVARDILK-YHKQTHGIVMGGANRRTEAEKLAKGVNFLVATPGRLLD 139
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L K++ Q++L SAT T
Sbjct: 140 HLQNTKGFIFKNLKCLVIDEADRILEIGFEEEMKQIIKLLPKER---QTVLFSATQT 193
>gi|407849137|gb|EKG03974.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 608
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 290/597 (48%), Gaps = 78/597 (13%)
Query: 349 EIPKKTEVKSGPISSLFQNNPDIPNVPT---------RRLKPVSEALFAPTSYEEFPGIH 399
E+P + G + + P++P+ R +KP +A AP E P +
Sbjct: 55 EVPAAATKEEGAGRRVKKARPELPSQQEENAEEGKQERPVKP-DDATRAPKLRERAPCVS 113
Query: 400 PFMKKNLN--------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+ NLN ++T +Q + L G D+L ++TGSGKTLA+ IPI+
Sbjct: 114 DYKALNLNPHIVTALENDFKFGELTGIQGRCVPAALSGRDLLAEAKTGSGKTLAFLIPIV 173
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTW-IVPSWLTGGEKMKSE 510
+ + R K+G AVII PTREL LQ + KL K F I GG+ E
Sbjct: 174 EIIS--RAGFRPKNGTAAVIIGPTRELCLQIEGVLLKLLKHFNGSITFLCCIGGQSRNQE 231
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
++ G+ I++A+PGRLLDH K T + L +DEADR+LD G+E D+ E + +L
Sbjct: 232 AFKLVNGMMIVIASPGRLLDHLKLTADWLTKNLLVLAVDEADRVLDNGFEEDMREIVSLL 291
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
K++ Q+ L SAT T V++LA ++ P + + + T D+L +Q ++
Sbjct: 292 PKKR---QTFLFSATQTTRVEQLARISFYRPPLLISMKRREEKATVDTL------EQGYV 342
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ P + RL+ L F V + + KM+VF ++++ +H EL + + +AF
Sbjct: 343 MCPSEQRLLVLYHF-------VKRNLKKKMIVFFSSRNAVSFHCELFNYIDVPCVAF--- 392
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG Q +R+ + F + SGVL TDVAARGLD+P VDWIVQ+ P YVHRVGR
Sbjct: 393 HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPHVDWIVQFDPPDDPVKYVHRVGR 452
Query: 751 TARVGHEGSSLLFLIPSEVKLVEEL-QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
TAR G G++L+FL+P E ++ L + + + E DLS++ G
Sbjct: 453 TARAGRCGNALMFLLPQEKLFLKYLYDDAHVTVSEYTF--------------DLSKVKQG 498
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
E E V L TSA + Y ++ Y+ S L+++F+ + L A
Sbjct: 499 VCE--------QLEQLVSTNYYLRTSARQAYEGYLLSYS--SSQLKNVFDVHNLDLAAVA 548
Query: 870 KSFALR-------DAPSVISGIGKPKNKE-----ELKNK-KMAINKEKSFKQRGNFS 913
K FAL D + + K +E E K+K + A+N+E K++ N S
Sbjct: 549 KGFALSEPSPLKLDLSQSAAHMSKKLRREFRHMKETKDKRRRAVNEETLKKRKSNIS 605
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q + L G D+L ++TGSGKTLA+ IPI++ + R K+G AVII
Sbjct: 136 ELTGIQGRCVPAALSGRDLLAEAKTGSGKTLAFLIPIVEIIS--RAGFRPKNGTAAVIIG 193
Query: 65 PTRELALQTLEIFTKLCKSFTW-IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + KL K F I GG+ E ++ G+ I++A+PGRLLDH
Sbjct: 194 PTRELCLQIEGVLLKLLKHFNGSITFLCCIGGQSRNQEAFKLVNGMMIVIASPGRLLDHL 253
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L K++ Q+ L SAT T
Sbjct: 254 KLTADWLTKNLLVLAVDEADRVLDNGFEEDMREIVSLLPKKR---QTFLFSATQT 305
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 16/133 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
L +DEADR+LD G+E D+ E + +L K++ Q+ L SAT T V++LA ++ P +
Sbjct: 267 LAVDEADRVLDNGFEEDMREIVSLLPKKR---QTFLFSATQTTRVEQLARISFYRPPLLI 323
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ + T D+L+Q +++ P + RL+ L F V + + KM+VF +
Sbjct: 324 SMKRREEKATV------DTLEQGYVMCPSEQRLLVLYHF-------VKRNLKKKMIVFFS 370
Query: 318 TQDMADYHTELLS 330
+++ +H EL +
Sbjct: 371 SRNAVSFHCELFN 383
>gi|402221225|gb|EJU01294.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 813
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 282/540 (52%), Gaps = 52/540 (9%)
Query: 387 FAPTSYEEFPGIH-PFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
F P++ E F G+ + + T TT+Q ++Q L G DVL ++TGSGKTLA
Sbjct: 50 FDPSTAELFAGLPLSLPTQRALRAASYTTPTTIQARTLQHTLRGRDVLGAARTGSGKTLA 109
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
+ +P+++ L R K +DG+ A+II PTRELA+Q E+ + + ++ + GG+
Sbjct: 110 FLLPVLELL--WRSKWGPQDGLGALIISPTRELAMQIFEVLRSVGQYHSFSA-GLVIGGK 166
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
++ E+ R+ + ++ILVATPGRLL H T ++ LVLDEADRILD G+ I
Sbjct: 167 NVRDEQERLTR-MNILVATPGRLLQHMDQTAGFATDNLQILVLDEADRILDMGFSHTINA 225
Query: 566 FLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSL 625
+ L K + Q++L SAT T +V+ LA ++L++P + + L P +L
Sbjct: 226 IIANLPKTR---QTLLFSATQTQSVKDLARLSLKDP------EFVSVREAGQELATPKNL 276
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENI 685
+QH++V +L L SFI + SK LVF+++ + E L I
Sbjct: 277 EQHYLVCELDKKLDVLYSFIKAHLK-------SKALVFLSSGKQVRFVFEAFRK-LQPGI 328
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
L G ++R ++F+ F S + VL TD+AARGLD P VDW+VQ AP + Y+
Sbjct: 329 PLLHLLGKQKLAKRMDIFQRFTSSTNAVLFATDIAARGLDFPAVDWVVQLDAPEDADTYI 388
Query: 746 HRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
HRVGRTAR G +LLFL+P+E + +++EL+ + +R+E+IK+K
Sbjct: 389 HRVGRTARYDSAGKALLFLLPNEEEGMLKELERKEVRVEKIKVK---------------- 432
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
E+ ++ S +S + + + + S++R + + + + +FN +++
Sbjct: 433 -------ESKTQSVAQSLQSFCFKDPEMKYLGQRAFVSYLR--SVWLQKNKEVFNLEEMP 483
Query: 865 LGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSG 924
+ FA S L AP + G+ ++ +E KNK + E + RG KK E DSG
Sbjct: 484 IKKFAASLGLPGAPRIRFRRGQGEDGKEKKNKSRTLAAEGNI--RGG--KKGSEDEDDSG 539
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T TT+Q ++Q L G DVL ++TGSGKTLA+ +P+++ L R K +DG+ A+
Sbjct: 75 SYTTPTTIQARTLQHTLRGRDVLGAARTGSGKTLAFLLPVLELL--WRSKWGPQDGLGAL 132
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ + + ++ + GG+ ++ E+ R+ + ++ILVATPGRLL
Sbjct: 133 IISPTRELAMQIFEVLRSVGQYHSFSA-GLVIGGKNVRDEQERLTR-MNILVATPGRLLQ 190
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T ++ LVLDEADRILD G+ I + L K + Q++L SAT T
Sbjct: 191 HMDQTAGFATDNLQILVLDEADRILDMGFSHTINAIIANLPKTR---QTLLFSATQT 244
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F+ ++ LVLDEADRILD G+ I + L K + Q++L S
Sbjct: 184 TPGRLLQHMDQTAGFATDNLQILVLDEADRILDMGFSHTINAIIANLPKTR---QTLLFS 240
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + + L P +L+QH++V +L L S
Sbjct: 241 ATQTQSVKDLARLSLKDP------EFVSVREAGQELATPKNLEQHYLVCELDKKLDVLYS 294
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK LVF+++
Sbjct: 295 FIKAHLK-------SKALVFLSS 310
>gi|320586620|gb|EFW99290.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 872
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 191/635 (30%), Positives = 294/635 (46%), Gaps = 125/635 (19%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
G+ + ++L+ + + T +Q ++ Q + D ++++TGSGKTLAY +P++Q++
Sbjct: 163 GLSRRIAQHLSTKLGLKAPTAIQHSAVPQLVTQDNDAFLQAETGSGKTLAYLLPLMQRIL 222
Query: 456 EMRP--------------KISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
+ KI R G++A+I+ PTREL Q + KL + WIV + +
Sbjct: 223 ALSENEDGSKRKDGRAPLKIHRDSGLFAIILAPTRELCKQISVVLEKLLRCAPWIVSTTV 282
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
GGE KSEKARIRKG++IL+ATPGRL DH +TE L V LVLDE DR+++ G+E
Sbjct: 283 IGGESKKSEKARIRKGVNILIATPGRLTDHLDNTEVLDVGTVRWLVLDEGDRLMEMGFEE 342
Query: 562 DIAEFLEILKKQKPQFQS-----------------ILLSATLTPAVQRLAGMTLQNPIQI 604
DI + ++K + S +L SAT+ VQ+L ++L++ I +
Sbjct: 343 DIRTIVGKIRKHGLKDTSKDGLVLPKGVLPSRRVTVLCSATMKMNVQKLGEISLEDAIHV 402
Query: 605 DAADSTD------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
A + D + T + P LKQ +IV P KLRLV L + +
Sbjct: 403 QAGTAADDAAAAASSGGAIVAATESAFSAPAQLKQMYIVVPAKLRLVTLIGLL--RSTFA 460
Query: 653 NEDEESKMLVFMATQDM-----ADYHT-------ELLSTVLGENIAFFKLHGSMSQSERT 700
+ K ++F++ A HT +++ + KLHGS++Q RT
Sbjct: 461 RKGSVMKAIIFISKAPAMVAPKASPHTVNTVGPAAYITSPANRTVVLHKLHGSLAQPVRT 520
Query: 701 EVFKTFRSVKS-GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS 759
F K+ VL+ TD+A+RGLD+P VD +++Y + D++HR+GRTAR G G
Sbjct: 521 ATLAAFSQEKNPAVLVTTDIASRGLDVPAVDLVIEYDPAFAVDDHLHRIGRTARAGRPGK 580
Query: 760 SLLFLIP-------------SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
++LFL P S LV +L + ++ D + LL+ G R
Sbjct: 581 AVLFLQPGGEEGYVSLLQSSSASTLVPQLYDTVLQAGFATTVDVPKALLAA---GGDERT 637
Query: 807 ADGNV----------ETAATALQMSFESAVLQ---------------------------- 828
+DG A +LQ+ E +LQ
Sbjct: 638 SDGTYFHDPSKSQSWSKRAESLQLHIEQRLLQTTGDEQDGLSPSSSSSPWKHSKMGGKGK 697
Query: 829 ---------QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
KIL A + + S +R YA++ +D R F+ Q+HLGH AKSF LR+AP
Sbjct: 698 SKFKEMSKDSKILE-EARQAFRSHIRAYATHVRDERVYFDITQLHLGHTAKSFGLREAPG 756
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSK 914
I G + + K A K K+ RG S+
Sbjct: 757 GIGGGVQRRTKRPSSGPAYA--KNKTLSSRGTASR 789
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 157/324 (48%), Gaps = 71/324 (21%)
Query: 1 MNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRP--------- 50
+ + T +Q ++ Q + D ++++TGSGKTLAY +P++Q++ +
Sbjct: 176 LGLKAPTAIQHSAVPQLVTQDNDAFLQAETGSGKTLAYLLPLMQRILALSENEDGSKRKD 235
Query: 51 -----KISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARI 105
KI R G++A+I+ PTREL Q + KL + WIV + + GGE KSEKARI
Sbjct: 236 GRAPLKIHRDSGLFAIILAPTRELCKQISVVLEKLLRCAPWIVSTTVIGGESKKSEKARI 295
Query: 106 RKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK 165
RKG++IL+ATPGRL DH +TE L V LVLDE DR+++ G+E DI + ++K
Sbjct: 296 RKGVNILIATPGRLTDHLDNTEVLDVGTVRWLVLDEGDRLMEMGFEEDIRTIVGKIRKH- 354
Query: 166 PQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 225
LK + + LVL + +L +
Sbjct: 355 -----------------------GLKDTSKDGLVLPKG-----------------VLPSR 374
Query: 226 KPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTD------------IHNTTDSLVI 273
+ +VL SAT+ VQ+L ++L++ I + A + D + T +
Sbjct: 375 R---VTVLCSATMKMNVQKLGEISLEDAIHVQAGTAADDAAAAASSGGAIVAATESAFSA 431
Query: 274 PDSLKQHFIVTPPKLRLVALASFI 297
P LKQ +IV P KLRLV L +
Sbjct: 432 PAQLKQMYIVVPAKLRLVTLIGLL 455
>gi|391340364|ref|XP_003744512.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX18-like [Metaseiulus occidentalis]
Length = 557
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 265/492 (53%), Gaps = 50/492 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T +Q +I +L+G D++ ++TGSGKTLA+ IP I+ + + K ++G
Sbjct: 95 MGFEKMTEIQLKAIPHLLEGRDMIANAKTGSGKTLAFLIPAIELMFNL--KFMPRNGTGV 152
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT + +L + F + GG SE ++ KG++IL+ATPGRLL
Sbjct: 153 LVITPTRELAMQTFGVLKELLQ-FHQQTFGLIMGGTNRNSEAEKLNKGVNILIATPGRLL 211
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ ++ L++DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 212 DHLQNTKNFVIKNLQCLIIDEADRILDIGFEEEMKQIIHLLPKRR---QTMLFSATQTKK 268
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ LA + L+ PI + + + H T L +Q +++ P R + L +
Sbjct: 269 TEELARVALKTEPITVGIEEKEE-HATVAGL------EQGYVICPSDKRFLLLFT----- 316
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ +H ELL+ + ++ +HG Q++RT F F +
Sbjct: 317 --FLKXNRTKKVMVFFSSCLSVKFHHELLNYI---DLPVMSIHGKQKQAKRTTTFFQFSN 371
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
SG+L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR G G +LL L P
Sbjct: 372 ADSGILLCTDVAARGLDIPKVDWIVQFDPPDDPKEYIHRVGRTARGEGGSGHALLILRPE 431
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ ++ ++E E S++A+ +Q E +
Sbjct: 432 EVGFLRYLKVAKVPMQE--------------FEFSWSKIAN---------IQPQLEKLIE 468
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ LH SA + Y +++R Y S+S L+ IF+ + I L KSF P V +G
Sbjct: 469 KNYFLHCSAREAYKAYIRAYESHS--LKSIFDVQTIDLVAVGKSFGFVVPPKVDINVGVS 526
Query: 888 KNKEELKNKKMA 899
K K++ + K
Sbjct: 527 KKKKDSRFKHFG 538
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 114/181 (62%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I +L+G D++ ++TGSGKTLA+ IP I+ + + K ++G
Sbjct: 95 MGFEKMTEIQLKAIPHLLEGRDMIANAKTGSGKTLAFLIPAIELMFNL--KFMPRNGTGV 152
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L + F + GG SE ++ KG++IL+ATPGRLL
Sbjct: 153 LVITPTRELAMQTFGVLKELLQ-FHQQTFGLIMGGTNRNSEAEKLNKGVNILIATPGRLL 211
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ ++ L++DEADRILD G+E ++ + + +L K++ Q++L SAT T
Sbjct: 212 DHLQNTKNFVIKNLQCLIIDEADRILDIGFEEEMKQIIHLLPKRR---QTMLFSATQTKK 268
Query: 181 T 181
T
Sbjct: 269 T 269
>gi|169605485|ref|XP_001796163.1| hypothetical protein SNOG_05766 [Phaeosphaeria nodorum SN15]
gi|160706772|gb|EAT86830.2| hypothetical protein SNOG_05766 [Phaeosphaeria nodorum SN15]
Length = 589
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 257/457 (56%), Gaps = 60/457 (13%)
Query: 436 SQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTL----EIFTKLCK 491
++TGSGKTLA+ IP I+ L MR K ++G +++ PTRELALQ E+ K +
Sbjct: 154 AKTGSGKTLAFLIPAIEMLSSMRFKP--RNGTGVIVVSPTRELALQIFGVARELMEKHSQ 211
Query: 492 SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEA 551
+F ++ GG ++E ++ KG+++L+ATPGRLLDH +T+ F ++ L++DEA
Sbjct: 212 TFGIVI-----GGANRRAEAEKLAKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEA 266
Query: 552 DRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADST 610
DRIL+ G+E ++ ++IL + Q++L SAT T V+ LA ++L+ P+ I+ D
Sbjct: 267 DRILEVGFEDEMRSIIKILPTDR---QTMLFSATQTTKVEDLARISLKAGPLYINV-DYR 322
Query: 611 DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 670
H+T + L +Q +++ R L SF+ + ++ K++VF ++ +
Sbjct: 323 KEHSTVEGL------EQGYVICDSDTRFRLLFSFL-------KKHQKKKVIVFFSSCNSV 369
Query: 671 DYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVD 730
++ ELL+ + ++ +LHG + Q RT F F + +SG LICTDVAARGLD+P VD
Sbjct: 370 KFYAELLNYI---DLPVLELHGKLKQQARTNRFFEFCNAQSGTLICTDVAARGLDIPEVD 426
Query: 731 WIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLFLIPSEVKLVEELQNRRIRIEEIKLK 788
W++Q+ P DY+HRVGRTAR G EG SL+FL+PSE+ ++ L+ R+ + E +L
Sbjct: 427 WVIQFDPPDDPRDYIHRVGRTAR-GSEGKGRSLMFLLPSEIGFLKLLKEARVPLVEFELP 485
Query: 789 DCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYA 848
+L++ Q E+ + + L+ SA GY S+++ YA
Sbjct: 486 --ANKILNI---------------------QSQLEALITKNYYLNKSAKDGYRSYLQAYA 522
Query: 849 SYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
S+S LR +F+ ++ L AKSF P + +G
Sbjct: 523 SHS--LRSVFDVHKLDLVKVAKSFGFSTPPRIDISLG 557
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 99/156 (63%), Gaps = 14/156 (8%)
Query: 27 SQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTL----EIFTKLCK 82
++TGSGKTLA+ IP I+ L MR K ++G +++ PTRELALQ E+ K +
Sbjct: 154 AKTGSGKTLAFLIPAIEMLSSMRFKP--RNGTGVIVVSPTRELALQIFGVARELMEKHSQ 211
Query: 83 SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEA 142
+F ++ GG ++E ++ KG+++L+ATPGRLLDH +T+ F ++ L++DEA
Sbjct: 212 TFGIVI-----GGANRRAEAEKLAKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEA 266
Query: 143 DRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DRIL+ G+E ++ ++IL + Q++L SAT T
Sbjct: 267 DRILEVGFEDEMRSIIKILPTDR---QTMLFSATQT 299
>gi|341884230|gb|EGT40165.1| hypothetical protein CAEBREN_22590 [Caenorhabditis brenneri]
Length = 513
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 251/444 (56%), Gaps = 48/444 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ T +T +Q SI P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K GI
Sbjct: 89 LGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGI-- 146
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+I+ PTREL++QT + ++L + + + + GG +EK ++ KG+SILVATPGRLL
Sbjct: 147 IIVSPTRELSMQTYGVLSELLEG-SNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLL 205
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P
Sbjct: 206 DHLQNTDNFLVRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSPK 262
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V L + L NP+++ + + ++ V + L+Q +IV P RL+ L +
Sbjct: 263 VDELVKLALHSNPVRVSVNEKAE-----EATV--EGLQQGYIVAPSDKRLLLLFT----- 310
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ +++ K++VF ++ + +H ELL+ + +I +HG Q +RT F F
Sbjct: 311 --FLKKNKTKKVMVFFSSCNSVKFHHELLNYI---DIPCMSIHGKQKQQKRTTTFFQFCQ 365
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +LL L P
Sbjct: 366 AESGILLCTDVAARGLDIPAVDWIVQYDPPDEPREYIHRVGRTARGTNGSGKALLVLRPE 425
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E S++A+ +Q E+ +
Sbjct: 426 ELGFLRYLKAAKVTLNE--------------FEFSWSKVAN---------IQSQLENLIS 462
Query: 828 QQKILHTSACKGYTSWVRFYASYS 851
+ L+ SA + Y ++R Y S+S
Sbjct: 463 KNYYLNKSAKEAYKCYLRAYDSHS 486
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T +Q SI P+L+G DVL ++TGSGKTLA+ +P I+ L ++ K GI
Sbjct: 89 LGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGI-- 146
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTREL++QT + ++L + + + + GG +EK ++ KG+SILVATPGRLL
Sbjct: 147 IIVSPTRELSMQTYGVLSELLEG-SNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLL 205
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
DH ++T+ ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P
Sbjct: 206 DHLQNTDNFLVRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSP 261
>gi|346318279|gb|EGX87883.1| ATP-dependent RNA helicase DDX18 [Cordyceps militaris CM01]
Length = 597
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 264/478 (55%), Gaps = 48/478 (10%)
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
+I P++ G DVL ++TGSGKTLA+ IP I+ L +R K ++G +I+ PTRELALQ
Sbjct: 151 AIPPLMAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGVIIVSPTRELALQ 208
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ +L K + + GG +E+ ++ KG+++LVATPGRLLDH T + +
Sbjct: 209 IFGVARELMKHHSQTY-GIVMGGANRNAEREKLTKGVNLLVATPGRLLDHLTSTPFV-YK 266
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-N 600
++ L++DEADRIL+ G+E +I + ++IL Q ++L SAT T V+ LA ++L+
Sbjct: 267 NLKSLIIDEADRILEVGFEDEIRKIVQILSNDNRQ--TMLFSATQTTKVEDLARISLRPG 324
Query: 601 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKM 660
P+ I+ D + +T D L +Q +++ R + L SF+ + +N+ ++ K+
Sbjct: 325 PLYINV-DEEERFSTVDGL------EQGYVLCDADRRFILLFSFL----RQMNQ-KKKKV 372
Query: 661 LVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVA 720
+VF ++ + Y+ ELL+ + + LHG Q +RT F F + +G+LICTDVA
Sbjct: 373 IVFFSSCNSVKYYAELLNYI---DCPVLDLHGKQKQQKRTNTFFEFSNAPNGILICTDVA 429
Query: 721 ARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRR 779
ARGLD+P VD+IVQ+ P ++ DY+HRVGRTAR G G SLLFL PSEV + L+ R
Sbjct: 430 ARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGAGKTGRSLLFLQPSEVGFLSHLKAAR 489
Query: 780 IRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKG 839
+ + E + + +++V Q E + + L SA
Sbjct: 490 VPVVEFEFP--TRKIVNV---------------------QSQLEKLIGKNFYLQQSAKDA 526
Query: 840 YTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
+ S++ YAS+S LR +++ ++ L K F P V +G +++ + ++
Sbjct: 527 FKSYLHAYASHS--LRSVYDVNKLDLAKVGKGFGFPTPPRVDITLGGSMSRDRTQGRR 582
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 120/209 (57%), Gaps = 22/209 (10%)
Query: 13 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 72
+I P++ G DVL ++TGSGKTLA+ IP I+ L +R K ++G +I+ PTRELALQ
Sbjct: 151 AIPPLMAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFK--PRNGTGVIIVSPTRELALQ 208
Query: 73 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 132
+ +L K + + GG +E+ ++ KG+++LVATPGRLLDH T + +
Sbjct: 209 IFGVARELMKHHSQTY-GIVMGGANRNAEREKLTKGVNLLVATPGRLLDHLTSTPFV-YK 266
Query: 133 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT------------LTPA 180
++ L++DEADRIL+ G+E +I + ++IL Q++L SAT L P
Sbjct: 267 NLKSLIIDEADRILEVGFEDEIRKIVQILSND--NRQTMLFSATQTTKVEDLARISLRPG 324
Query: 181 TCWCKHTETLKFSKVEHL----VLDEADR 205
+ E +FS V+ L VL +ADR
Sbjct: 325 PLYINVDEEERFSTVDGLEQGYVLCDADR 353
>gi|357153209|ref|XP_003576375.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
27-like [Brachypodium distachyon]
Length = 544
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 259/483 (53%), Gaps = 60/483 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q S+ ++ G DVL ++TGSGKTLA+ IP I+ L + ++G
Sbjct: 65 MNYTHLTQIQARSMPNLMLGNDVLGSAKTGSGKTLAFLIPAIELLH--KACFMPRNGTGV 122
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L K + + +++ GG M++E ++ KGI++LVATPGRLL
Sbjct: 123 IVVCPTRELAIQTHNVAKELMKYHSQTL-AYVIGGTNMRNEANQLVKGINLLVATPGRLL 181
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + + +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT T
Sbjct: 182 DHLRNTTSFNYKRLKCLIIDEADRILEQNFEEDMKQIFKRLPRDR---QTVLFSATQTQK 238
Query: 590 VQRLAGMTL-QNP--------IQIDAADSTDIHNTTDSLVIP--DSLKQHFIVTPPKLRL 638
V A T QN +++D DS + P + L+Q + V P + R
Sbjct: 239 VVEFANFTFGQNEERQRKLVYVRVD-----------DSKLKPTVEGLQQGYCVIPSEKRF 287
Query: 639 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSE 698
+ L +F + E+ K+ VF ++ +H E L+ LG I + +HG Q +
Sbjct: 288 LVLYAFHRDAAXDTPRKEDVKVKVFFSSCSSVKFHAEFLN-FLG--IWCYDIHG---QQK 341
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-E 757
RT F F K+G+L+CT+VAARGLD+P VD+I+Q+ P DY+HRVGRTAR +
Sbjct: 342 RTSTFFQFLKEKNGILLCTNVAARGLDIPDVDYILQFDPPDDPKDYIHRVGRTARGDKGK 401
Query: 758 GSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATA 817
GS+LLFL+P E+KL+ LQ I + E E
Sbjct: 402 GSALLFLLPEELKLLIYLQAANISLTEYVFG-----------------------EKHVPK 438
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
Q E+ V L+ SA + Y S++ Y S+S ++ IF Q+ L A SF ++
Sbjct: 439 SQSQLENIVGGNYFLNQSAKEAYRSYLLAYNSHS--MKDIFYVHQLDLKKVAASFCFKNP 496
Query: 878 PSV 880
P V
Sbjct: 497 PKV 499
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 117/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q S+ ++ G DVL ++TGSGKTLA+ IP I+ L + ++G
Sbjct: 65 MNYTHLTQIQARSMPNLMLGNDVLGSAKTGSGKTLAFLIPAIELLH--KACFMPRNGTGV 122
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L K + + +++ GG M++E ++ KGI++LVATPGRLL
Sbjct: 123 IVVCPTRELAIQTHNVAKELMKYHSQTL-AYVIGGTNMRNEANQLVKGINLLVATPGRLL 181
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + + +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT T
Sbjct: 182 DHLRNTTSFNYKRLKCLIIDEADRILEQNFEEDMKQIFKRLPRDR---QTVLFSATQT 236
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 172 LLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 231
LL AT ++T + + +++ L++DEADRIL+Q +E D+ + + L + + Q+
Sbjct: 172 LLVATPGRLLDHLRNTTSFNYKRLKCLIIDEADRILEQNFEEDMKQIFKRLPRDR---QT 228
Query: 232 VLLSATLTPAVQRLAGMTL-QNP--------IQIDAADSTDIHNTTDSLVIP--DSLKQH 280
VL SAT T V A T QN +++D DS + P + L+Q
Sbjct: 229 VLFSATQTQKVVEFANFTFGQNEERQRKLVYVRVD-----------DSKLKPTVEGLQQG 277
Query: 281 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ V P + R + L +F + E+ K+ VF ++ +H E L+
Sbjct: 278 YCVIPSEKRFLVLYAFHRDAAXDTPRKEDVKVKVFFSSCSSVKFHAEFLN 327
>gi|154345772|ref|XP_001568823.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066165|emb|CAM43955.1| putative DEAD box RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 654
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 265/517 (51%), Gaps = 52/517 (10%)
Query: 406 LNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 465
L + T++T +Q I L G D+L ++TG+GKTLA+ IPI++ + R +
Sbjct: 174 LEQEFKFTELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIV--CRSGFRPSN 231
Query: 466 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVAT 524
G A+II PTREL LQ + KL K F V GG+ E ++ G+ I+VA+
Sbjct: 232 GTAAIIIGPTRELCLQIEGVLLKLLKHFNGSVTFLCCIGGQSRNQEGFKLANGVMIVVAS 291
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 584
PGRLLDH K T + L +DEADR+LD G+E D+ E + +L K + Q+ L SA
Sbjct: 292 PGRLLDHLKLTADWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNR---QTFLFSA 348
Query: 585 TLTPAVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
T T V++LA ++ + P+ I D D+L+Q ++V + RL+ L
Sbjct: 349 TQTTRVEQLARISFHKTPVFISMKSKKDKATV-------DTLEQGYVVCASEQRLLVLYH 401
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F V ++ + K++VF ++++ +H EL + + IAF HG Q +R+ +
Sbjct: 402 F-------VRKNLKKKIIVFFSSRNSVSFHCELFNYIDVPCIAF---HGKQKQHQRSATY 451
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + SGVL TDVAARGLD+P VDWIVQ+ P YVHRVGRTAR G G++L+F
Sbjct: 452 MQFCNAPSGVLFTTDVAARGLDIPEVDWIVQFDPPDDPVKYVHRVGRTARAGRCGNALMF 511
Query: 764 LIPSEVKLVEEL-QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L+P E + L + +R+ E D++++ GNV Q
Sbjct: 512 LLPQEELFLRYLYDDANVRVNEYTF--------------DVAKI-KGNV-------QDQL 549
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E V L TSA + Y ++ Y+S L+++FN + + L A+ FAL + P +
Sbjct: 550 EQLVSSNYYLRTSARQAYEGYLLSYSSCQ--LKNVFNIQSLDLAAVARGFALCEPPPIKM 607
Query: 883 GIGKPKNKEELKNKK--MAINKEKSFKQRGNFSKKQM 917
+ + K++ A+ K K+R N ++K M
Sbjct: 608 DLSQSAAHMSKKSRHEFRAMRHAKDIKRR-NVNEKSM 643
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 6/177 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T++T +Q I L G D+L ++TG+GKTLA+ IPI++ + R +G A+I
Sbjct: 180 FTELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIV--CRSGFRPSNGTAAII 237
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLD 121
I PTREL LQ + KL K F V GG+ E ++ G+ I+VA+PGRLLD
Sbjct: 238 IGPTRELCLQIEGVLLKLLKHFNGSVTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLLD 297
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H K T + L +DEADR+LD G+E D+ E + +L K + Q+ L SAT T
Sbjct: 298 HLKLTADWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNR---QTFLFSATQT 351
>gi|159114582|ref|XP_001707515.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157435621|gb|EDO79841.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 632
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 274/537 (51%), Gaps = 44/537 (8%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
S+ E GIH + + L + + T +QQ +I I+ G DV++++QTGSGKTLA+ +P+
Sbjct: 68 SFSEL-GIHEQICEILKSKLQVHNPTFIQQQAIPRIMSGEDVIIKAQTGSGKTLAFLLPV 126
Query: 451 IQKL----QEMRPKISRKD--GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
+ KL Q+ P +++ +I+ PT+ELA+Q+ E+ S T +V L G
Sbjct: 127 LTKLFTDYQQRGPSSFKREEWASKVLIVSPTKELAMQS-ELVVASLLSRTVMVSGSLIGA 185
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
EKA +RKGI+++ TPGR+ DH T K + ++ +VLDE D+++ G+ +
Sbjct: 186 VPRDKEKASLRKGITVISGTPGRIQDHLNQTACFKLTNIQVVVLDECDQLISHGFSSALQ 245
Query: 565 EFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHN-----TTDSL 619
L +K P+ Q IL SAT V +++ I I S + N
Sbjct: 246 AILSHARKANPKLQVILASATADRRVLDFVRSSVREAIPIGDLFSAEPVNPQPEAGLAKA 305
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 678
V P SL+Q F + P K+RL L S + + +E + + ++LVF T+D+ E+L
Sbjct: 306 VTPASLEQRFCIVPSKMRLALLISTLAFETVKASESKTAVRILVFAETKDVCSLLNEILM 365
Query: 679 TVLGENIA--------FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL-- 728
+ + F LHGS+ +R V+ F G+L+ TDVAARGL+L
Sbjct: 366 RLSEAETSEDHFILAKIFHLHGSLGVEDRQIVWHKFLE-SGGILVATDVAARGLNLGSGA 424
Query: 729 -------VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIR 781
VD ++Q+ APSS YVHRVGR R+G G S+LFL+ +E LV L + I
Sbjct: 425 LSSGLHGVDLVIQFEAPSSCEQYVHRVGRAGRMGQRGRSILFLLENEAGLVPLLGSYGIA 484
Query: 782 IEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYT 841
+ + + +L + RL + +Q E + K L A + ++
Sbjct: 485 LAATPVDALAERVLEYRKP---IRLME--------RVQAKVEELIAGDKELRHMAVQAFS 533
Query: 842 SWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKM 898
++R Y+ S D+RHIFN K +HLGH AK F L + PS + G +P +K+++K +M
Sbjct: 534 MYIRGYSMKSSDVRHIFNLKSLHLGHIAKGFGLSEPPSKVLGEFRP-SKKQIKEARM 589
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL----QEMRPKISRKD 56
+ + T +QQ +I I+ G DV++++QTGSGKTLA+ +P++ KL Q+ P +++
Sbjct: 86 LQVHNPTFIQQQAIPRIMSGEDVIIKAQTGSGKTLAFLLPVLTKLFTDYQQRGPSSFKRE 145
Query: 57 --GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
+I+ PT+ELA+Q+ E+ S T +V L G EKA +RKGI+++
Sbjct: 146 EWASKVLIVSPTKELAMQS-ELVVASLLSRTVMVSGSLIGAVPRDKEKASLRKGITVISG 204
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGR+ DH T K + ++ +VLDE D+++ G+ + L +K P+ Q IL S
Sbjct: 205 TPGRIQDHLNQTACFKLTNIQVVVLDECDQLISHGFSSALQAILSHARKANPKLQVILAS 264
Query: 175 AT 176
AT
Sbjct: 265 AT 266
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T K + ++ +VLDE D+++ G+ + L +K P+ Q +L SAT V
Sbjct: 215 QTACFKLTNIQVVVLDECDQLISHGFSSALQAILSHARKANPKLQVILASATADRRVLDF 274
Query: 246 AGMTLQNPIQIDAADSTDIHN-----TTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+++ I I S + N V P SL+Q F + P K+RL L S + +
Sbjct: 275 VRSSVREAIPIGDLFSAEPVNPQPEAGLAKAVTPASLEQRFCIVPSKMRLALLISTLAFE 334
Query: 301 CQNVNEDEES-KMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEIPK 352
+E + + ++LVF T+D+ E+L +L E D++ + K
Sbjct: 335 TVKASESKTAVRILVFAETKDVCSLLNEIL------MRLSEAETSEDHFILAK 381
>gi|443720780|gb|ELU10378.1| hypothetical protein CAPTEDRAFT_149475 [Capitella teleta]
Length = 474
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 259/473 (54%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI +L+G D++ ++TGSGKTLA+ IP+I+ + ++ K ++G A
Sbjct: 1 MGFTHMTEIQAKSIPHLLEGRDLMGGAKTGSGKTLAFLIPVIELVYKL--KFLPRNGTGA 58
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
II PTRELA+Q + +L K + GG E ++ G++ILVATPGRLL
Sbjct: 59 FIISPTRELAMQIFGVLKELLKYHKHTF-GLIMGGTNRGEEAKKLANGVNILVATPGRLL 117
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 118 DHLQNTRDFMFKNCCCLVIDEADRILDIGFEEEMKQIIKLLPAKR---QTMLFSATQTRK 174
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
+ LA ++L+ P+ + D + + LKQ ++V P + R + L +F+
Sbjct: 175 TEDLAKLSLKKEPLYVGVDDEKEQATV-------EGLKQGYVVCPSEKRFLLLFTFL--- 224
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+++ KM+VF ++ ELL+ + ++ +HG Q++RT+ F F +
Sbjct: 225 ----KKNKNKKMMVFFNACHTVKFYNELLNYI---DLPVKCIHGKQKQTKRTQTFFQFCN 277
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +G +LL L P
Sbjct: 278 AKDGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGGQGHALLILRPE 337
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ +I + E +E +++++ +Q E+ +
Sbjct: 338 ELGFLRYLRQAKIALAE--------------LEFSWAKISN---------IQPQLENLIE 374
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ L+ SA +GY +VR Y S+ L+ +F+ K + L A SF L+ P V
Sbjct: 375 KNYFLNKSAAEGYKGYVRAYGSHH--LKSVFDIKTLDLRKTALSFGLKVPPYV 425
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 6/181 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI +L+G D++ ++TGSGKTLA+ IP+I+ + ++ K ++G A
Sbjct: 1 MGFTHMTEIQAKSIPHLLEGRDLMGGAKTGSGKTLAFLIPVIELVYKL--KFLPRNGTGA 58
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
II PTRELA+Q + +L K + GG E ++ G++ILVATPGRLL
Sbjct: 59 FIISPTRELAMQIFGVLKELLKYHKHTF-GLIMGGTNRGEEAKKLANGVNILVATPGRLL 117
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T F LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 118 DHLQNTRDFMFKNCCCLVIDEADRILDIGFEEEMKQIIKLLPAKR---QTMLFSATQTRK 174
Query: 181 T 181
T
Sbjct: 175 T 175
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T F LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T +
Sbjct: 121 QNTRDFMFKNCCCLVIDEADRILDIGFEEEMKQIIKLLPAKR---QTMLFSATQTRKTED 177
Query: 245 LAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
LA ++L+ P+ + D + + LKQ ++V P + R + L +F+
Sbjct: 178 LAKLSLKKEPLYVGVDDEKEQATV-------EGLKQGYVVCPSEKRFLLLFTFL 224
>gi|294886929|ref|XP_002771924.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
gi|239875724|gb|EER03740.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
Length = 582
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 274/511 (53%), Gaps = 59/511 (11%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N T +T +Q +I +L G DVL ++TGSGKTLA+ +P ++ L R K+G +
Sbjct: 105 NFTTMTDIQAKAIPLMLKGKDVLGAAKTGSGKTLAFLVPALELLVATR--FQPKNGTGVM 162
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGRL 528
+I PTRELA+Q ++ +L S T + ++ + GG K+E ++ +GI+I+VATPGRL
Sbjct: 163 VISPTRELAMQIYDVCKRLVDS-TKLSQTYGIVMGGVNRKNEADKLSRGINIIVATPGRL 221
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH ++T ++ + LV+DEADRIL G+E D+ + L+IL K++ Q+ L SAT T
Sbjct: 222 LDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKR---QTSLFSATQTQ 278
Query: 589 AVQRLAGMTLQNPI--QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V LA ++L+ PI Q AD +T LV Q ++V RL L +F+
Sbjct: 279 KVNDLARLSLKKPIFVQSKGADDDAAISTASGLV------QGYVVVGGDDRLRLLFTFL- 331
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++++ K++VF ++ + +H ELL+ + +I +HG QS R F F
Sbjct: 332 ------KKNQKKKVMVFFSSCNSVKFHDELLNYI---DIPVISIHGQKKQSARMTNFYRF 382
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLFL 764
++SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G EG+ +LLFL
Sbjct: 383 CQMESGILLCTDVAARGLDIPKVDWIVQYDPPDDPKEYIHRVGRTAR-GAEGTGKALLFL 441
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATA-LQMSFE 823
+P E+ + L+ + ++ L + A A +Q E
Sbjct: 442 MPEELGFLRYLR-----------------------KSGVTTLNEYVFPPAKVANIQHQLE 478
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASY-SKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
V LH ++ Y S++ YA++ SKD F+ + L AKSF P V
Sbjct: 479 KLVETNYHLHRASRDAYRSYLHAYAAHASKD---CFDVHSLDLQKLAKSFGFAVPPKVDL 535
Query: 883 GIGKPKNKEELKNKKMAINKEKSFKQRGNFS 913
+ K K + +KM + + K +G+FS
Sbjct: 536 NL-KDTKKSDRGGRKM-VKSGRFNKGQGDFS 564
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 114/179 (63%), Gaps = 8/179 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N T +T +Q +I +L G DVL ++TGSGKTLA+ +P ++ L R K+G +
Sbjct: 105 NFTTMTDIQAKAIPLMLKGKDVLGAAKTGSGKTLAFLVPALELLVATR--FQPKNGTGVM 162
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGRL 119
+I PTRELA+Q ++ +L S T + ++ + GG K+E ++ +GI+I+VATPGRL
Sbjct: 163 VISPTRELAMQIYDVCKRLVDS-TKLSQTYGIVMGGVNRKNEADKLSRGINIIVATPGRL 221
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LDH ++T ++ + LV+DEADRIL G+E D+ + L+IL K++ Q+ L SAT T
Sbjct: 222 LDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKR---QTSLFSATQT 277
>gi|308499547|ref|XP_003111959.1| hypothetical protein CRE_29809 [Caenorhabditis remanei]
gi|308268440|gb|EFP12393.1| hypothetical protein CRE_29809 [Caenorhabditis remanei]
Length = 578
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 266/498 (53%), Gaps = 61/498 (12%)
Query: 408 EGMNITQVTTVQQLSIQPILD-----------------------GGDVLVRSQTGSGKTL 444
+G+ T +T +Q SI P+L+ G DVL ++TGSGKTL
Sbjct: 83 QGLGFTTMTEIQAKSIDPLLEVSHFPSLSINFICFSSSFDNFFQGKDVLASAKTGSGKTL 142
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
A+ IP I+ L ++ K GI +I+ PTREL++QT + +L + + + + GG
Sbjct: 143 AFLIPAIELLHKLNWKQHNGTGI--IIVSPTRELSMQTYGVLAELLEG-SNLTYGLVMGG 199
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
+EK ++ KG+SILVATPGRLLDH ++T+ ++ L++DEADRILD G+E ++
Sbjct: 200 SNRSAEKDKLGKGVSILVATPGRLLDHLQNTDNFLVRNLKCLIIDEADRILDIGFEIEMQ 259
Query: 565 EFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPD 623
+ L L KQ+ QS+L SAT +P V L + L NP+++ + + ++ V +
Sbjct: 260 QVLRHLPKQR---QSMLFSATHSPKVDELVKLALHSNPVRVSVNEKAE-----EATV--E 309
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+Q +IV P RL+ L + + +++ K++VF ++ + +H ELL+ +
Sbjct: 310 GLQQGYIVAPSDKRLLLLFT-------FLKKNKTKKVMVFFSSCNSVKFHHELLNYI--- 359
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+I +HG Q +RT F F +SG+L+CTDVAARGLD+P VDWIVQY P +
Sbjct: 360 DIPCMSIHGKQKQQKRTTTFFQFCQAESGILLCTDVAARGLDIPAVDWIVQYDPPDEPRE 419
Query: 744 YVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD 802
Y+HRVGRTAR G +LL L P E+ + L+ ++ + E +
Sbjct: 420 YIHRVGRTARGTNGSGKALLVLRPEELGFLRYLKAAKVTLNEFEF----------SWNKV 469
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+ +LA + A +Q E+ + + L+ SA + Y ++R Y S+S L+ IF+
Sbjct: 470 IFKLAKTDPYFVAN-IQSQLENLISKNYYLNKSAKEAYKCYLRAYDSHS--LKDIFDVTN 526
Query: 863 IHLGHFAKSFALRDAPSV 880
+ L +KSF P V
Sbjct: 527 MDLTAVSKSFGFSVPPFV 544
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 29/202 (14%)
Query: 1 MNITQVTTVQQLSIQPILD-----------------------GGDVLVRSQTGSGKTLAY 37
+ T +T +Q SI P+L+ G DVL ++TGSGKTLA+
Sbjct: 85 LGFTTMTEIQAKSIDPLLEVSHFPSLSINFICFSSSFDNFFQGKDVLASAKTGSGKTLAF 144
Query: 38 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 97
IP I+ L ++ K GI +I+ PTREL++QT + +L + + + + GG
Sbjct: 145 LIPAIELLHKLNWKQHNGTGI--IIVSPTRELSMQTYGVLAELLEG-SNLTYGLVMGGSN 201
Query: 98 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 157
+EK ++ KG+SILVATPGRLLDH ++T+ ++ L++DEADRILD G+E ++ +
Sbjct: 202 RSAEKDKLGKGVSILVATPGRLLDHLQNTDNFLVRNLKCLIIDEADRILDIGFEIEMQQV 261
Query: 158 LEILKKQKPQFQSILLSATLTP 179
L L KQ+ QS+L SAT +P
Sbjct: 262 LRHLPKQR---QSMLFSATHSP 280
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 82/147 (55%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T+ ++ L++DEADRILD G+E ++ + L L KQ+ QS+L SAT +P V
Sbjct: 228 QNTDNFLVRNLKCLIIDEADRILDIGFEIEMQQVLRHLPKQR---QSMLFSATHSPKVDE 284
Query: 245 LAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
L + L NP+++ + + ++ V + L+Q +IV P RL+ L +
Sbjct: 285 LVKLALHSNPVRVSVNEKAE-----EATV--EGLQQGYIVAPSDKRLLLLFT-------F 330
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
+ +++ K++VF ++ + +H ELL+
Sbjct: 331 LKKNKTKKVMVFFSSCNSVKFHHELLN 357
>gi|397613953|gb|EJK62514.1| hypothetical protein THAOC_16870, partial [Thalassiosira oceanica]
Length = 870
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 248/502 (49%), Gaps = 104/502 (20%)
Query: 484 EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS-- 541
E LC ++ WIVP L+GGEK KSEKAR+RKGISILVATPGRLLDH TE L S
Sbjct: 372 EAAMDLCSAYPWIVPGCLSGGEKRKSEKARLRKGISILVATPGRLLDHLGKTECLLLSLK 431
Query: 542 -KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ---------FQSILLSATLTPAVQ 591
K+E LVLDEADR+LD G I + ++ L+ +P+ ++S+L+SAT++ ++
Sbjct: 432 GKLEWLVLDEADRLLDAGLGHQIGQIVQHLRSNQPRAGPGRDGVTWRSVLVSATISREME 491
Query: 592 RLAGMTLQN--------------------PIQIDAADSTDIHNTTDSLV-------IPDS 624
LA L P D D D+ ++ S P
Sbjct: 492 GLAETMLGGGDGWVWARGRSKGGKSKVPKPGGGDEGDDDDVKPSSSSGGGSGLDHSAPRQ 551
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST----- 679
L Q ++V KLRL +L +F+ + ++ + +VF++T D DYH L ++
Sbjct: 552 LAQLYMVVSAKLRLASLVAFLAARAA-----QKERTVVFISTCDGVDYHHALFNSAECVL 606
Query: 680 ----------------VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARG 723
+LG+ +KLHG + +R ++F +S VL+ TDVAARG
Sbjct: 607 GESDDKDDSAEGRSEGMLGKKCPIYKLHGDVPHDKRMSTLESFGRSESAVLLATDVAARG 666
Query: 724 LDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIR-I 782
L+ P +DWIVQY P + DYVHR GR+AR G G +LLFL+PSE + VE L+ R + +
Sbjct: 667 LNFPDLDWIVQYDPPCETKDYVHRAGRSARAGRAGHALLFLLPSERRYVEVLRLRGLEDV 726
Query: 783 EEIKLKDCLQNLL----SVKMEGDL----SRLADGNVETAATALQMSFESAVL------- 827
+ L L V EG + +DG+ E TA+Q E +L
Sbjct: 727 SPLSLSATLTKAAELCPGVAQEGSAKAAGNTFSDGSGEAFTTAVQTRLEQTILDDDARYK 786
Query: 828 -------------QQKILH----------TSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
Q++ L A K ++++VR Y + + +R IFN + +H
Sbjct: 787 TDMDKKFKGMDQKQRRKLQRKEKPVGPLLEGARKAFSAFVRAYPAKERAVRPIFNARALH 846
Query: 865 LGHFAKSFALRDAPSVISGIGK 886
LGH A+S AL+DAP + GK
Sbjct: 847 LGHVARSLALKDAPRMGRRGGK 868
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 78/116 (67%), Gaps = 12/116 (10%)
Query: 75 EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS-- 132
E LC ++ WIVP L+GGEK KSEKAR+RKGISILVATPGRLLDH TE L S
Sbjct: 372 EAAMDLCSAYPWIVPGCLSGGEKRKSEKARLRKGISILVATPGRLLDHLGKTECLLLSLK 431
Query: 133 -KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ---------FQSILLSATLT 178
K+E LVLDEADR+LD G I + ++ L+ +P+ ++S+L+SAT++
Sbjct: 432 GKLEWLVLDEADRLLDAGLGHQIGQIVQHLRSNQPRAGPGRDGVTWRSVLVSATIS 487
>gi|384484503|gb|EIE76683.1| hypothetical protein RO3G_01387 [Rhizopus delemar RA 99-880]
Length = 686
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 253/467 (54%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ I L DVL ++TGSGKTL++ IP+++ L R + + DG+ A+II P
Sbjct: 2 MTEIQRKGIPLALAKKDVLGAAKTGSGKTLSFLIPVLEIL--FRQQWNSADGLGALIISP 59
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ K T+ + GG++ K E+ RI + ++ILV+TPGRLL H
Sbjct: 60 TRELAVQIFEVLKKIGKYHTF-SAGLIIGGKEFKVEQERISR-MNILVSTPGRLLQHMDQ 117
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
+ +++ LVLDEADRI+D G++ + +E L + Q+++ SAT T +V+ LA
Sbjct: 118 SVGFVCDQLQCLVLDEADRIMDMGFQNTMNAIIENLPNHR---QTLMFSATQTRSVKDLA 174
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + + + H+T P +L QHF+ +L L SFI +
Sbjct: 175 RLSLKDPEYVAVHERAE-HST------PKTLSQHFVTAELHQKLDILYSFIKTHLK---- 223
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+KM+VFM++ + E L I LHG Q++R E+F+ F + + VL
Sbjct: 224 ---TKMIVFMSSCKQTRFVYESFCK-LQPGIPIMHLHGKQKQTKRVEIFRKFTATQHAVL 279
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
+CTD+AARGLD P VDW+VQ P + Y+HRVGRTAR EG +L+ L+PSEV+ + E
Sbjct: 280 LCTDIAARGLDFPAVDWVVQLDCPEDADTYIHRVGRTARFDAEGHALMILVPSEVEGMTE 339
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
EL+ +R+ IEEIK++ Q +Q +S Q +
Sbjct: 340 ELKKKRVPIEEIKIRTSKQQ-----------------------TIQKQLQSFCFQDPEIK 376
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A + + +++R + Y + + IF+ + FA S L AP +
Sbjct: 377 YLAQRAFVAYMR--SIYLQKNKTIFDVNALPAEEFAHSLGLAGAPKI 421
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ I L DVL ++TGSGKTL++ IP+++ L R + + DG+ A+II P
Sbjct: 2 MTEIQRKGIPLALAKKDVLGAAKTGSGKTLSFLIPVLEIL--FRQQWNSADGLGALIISP 59
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ K T+ + GG++ K E+ RI + ++ILV+TPGRLL H
Sbjct: 60 TRELAVQIFEVLKKIGKYHTF-SAGLIIGGKEFKVEQERISR-MNILVSTPGRLLQHMDQ 117
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ +++ LVLDEADRI+D G++ + +E L + Q+++ SAT T
Sbjct: 118 SVGFVCDQLQCLVLDEADRIMDMGFQNTMNAIIENLPNHR---QTLMFSATQT 167
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 22/151 (14%)
Query: 170 SILLSATLTPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 227
+IL+S TP +++ F +++ LVLDEADRI+D G++ + +E L +
Sbjct: 102 NILVS---TPGRLLQHMDQSVGFVCDQLQCLVLDEADRIMDMGFQNTMNAIIENLPNHR- 157
Query: 228 QFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPK 287
Q+++ SAT T +V+ LA ++L++P + + + H+T P +L QHF+
Sbjct: 158 --QTLMFSATQTRSVKDLARLSLKDPEYVAVHERAE-HST------PKTLSQHFVTAELH 208
Query: 288 LRLVALASFILGKCQNVNEDEESKMLVFMAT 318
+L L SFI + +KM+VFM++
Sbjct: 209 QKLDILYSFIKTHLK-------TKMIVFMSS 232
>gi|358366429|dbj|GAA83050.1| ATP-dependent RNA helicase Dbp4 [Aspergillus kawachii IFO 4308]
Length = 803
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 248/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ IPI++ L R + S DG+ A+++ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENL--YRKQWSEHDGLGALVLSP 127
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 186 TSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQTKKVSDLA 242
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H T S P L+QH++VTP +L L SFI +
Sbjct: 243 RLSLQDP------EYVAVHETASS-ATPSKLQQHYVVTPLPQKLDVLWSFIRSNLK---- 291
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E + I LHG Q R ++ F S + VL
Sbjct: 292 ---SKTIVFLSSGKQVRFVYESFRH-MQPGIPLMHLHGRQKQGGRLDITTKFSSAQHAVL 347
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE K +++
Sbjct: 348 FATDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEKGMLK 407
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++++E I +K Q + +++ M F+ L K L
Sbjct: 408 RLEQKKVQVERINIKANKQQSIKDQLQ------------------NMCFKDPEL--KYLG 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A Y V Y + + IFN K++ L FA S L AP +
Sbjct: 448 QKAFISYAKSV-----YVQKDKEIFNIKELKLDEFAGSMGLPGAPRI 489
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ IPI++ L R + S DG+ A+++ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENL--YRKQWSEHDGLGALVLSP 127
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 186 TSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQT 235
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 197 LVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQTKKVSDLARLSLQDP---- 249
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +H T S P L+QH++VTP +L L SFI + SK +VF++
Sbjct: 250 --EYVAVHETASS-ATPSKLQQHYVVTPLPQKLDVLWSFIRSNLK-------SKTIVFLS 299
Query: 318 T 318
+
Sbjct: 300 S 300
>gi|440898317|gb|ELR49842.1| ATP-dependent RNA helicase DDX55, partial [Bos grunniens mutus]
Length = 613
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 271/526 (51%), Gaps = 55/526 (10%)
Query: 369 PDIPNVPTRRLKPVSEALFAPTSYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPIL 427
P +V R ++ V+E S+E P +HP + L E + +T VQ +I +
Sbjct: 3 PGSSSVAERTMEHVTEG-----SWESLPVPLHPQVLSVLRE-LGFPYMTPVQSATIPLFM 56
Query: 428 DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFT 487
DV + TGSGKTLA+ IPI++ L K+ +K + A+II PTRELA+Q E+ +
Sbjct: 57 KNKDVAAEAVTGSGKTLAFVIPIVEILLRREEKL-KKSQVGAIIITPTRELAVQIEEVLS 115
Query: 488 KLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH-TETLKFSK--- 542
K F GG + AR ++ G +I+VATPGRL D + E L +
Sbjct: 116 HFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRLEDMFRRKAEGLDLASCVR 175
Query: 543 -VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
+E LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+ L L+NP
Sbjct: 176 SLEVLVLDEADRLLDMGFETSINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNP 232
Query: 602 IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKML 661
++I + ++T P L+ H++V + L F+ + Q K L
Sbjct: 233 VRISVKEKGVAASSTQK--TPSRLENHYMVCKADEKFNQLVHFLRNRKQ-------EKHL 283
Query: 662 VFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAA 721
VF +T +Y+ + L T++ + + +HG M + +R ++F FR ++SG+L+CTDV A
Sbjct: 284 VFFSTCACVEYYGKALETLV-KGVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMA 341
Query: 722 RGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRI 780
RG+D+P V+W++QY PS+++ +VHR GRTAR+GH GS+L+FL+P E + L N++
Sbjct: 342 RGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYISFLAINQKC 401
Query: 781 RIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGY 840
++E+KL+ +LL ++ L + + K +
Sbjct: 402 PLQEMKLQKNTADLLP------------------------KLKAMALGDRAVFEKGMKAF 437
Query: 841 TSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
S+V+ YA + +L IF K + A+ FAL P + GK
Sbjct: 438 VSYVQAYAKHECNL--IFRLKDLDFASLARGFALLRMPKMPELRGK 481
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 143/327 (43%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 44 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIVEILLRREEKL-KKSQVGAIIITP 102
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + AR ++ G +I+VATPGRL D +
Sbjct: 103 TRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRLEDMFR 162
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L A+C
Sbjct: 163 R-------KAEGLDL----------------------------------------ASC-- 173
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+E LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 174 -------VRSLEVLVLDEADRLLDMGFETSINTILEFLPKQR---RTGLFSATQTQEVEN 223
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP++I + ++T P L+ H++V + L F+ + Q
Sbjct: 224 LVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMVCKADEKFNQLVHFLRNRKQ-- 279
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
K LVF +T +Y+ + L T
Sbjct: 280 -----EKHLVFFSTCACVEYYGKALET 301
>gi|340057232|emb|CCC51574.1| putative DEAD box RNA helicase [Trypanosoma vivax Y486]
Length = 601
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 248/483 (51%), Gaps = 47/483 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
++P + L ++T +Q + L G D+L ++TGSGKTLA+ IPI++ +
Sbjct: 113 LNPHVVSALENEFKFEKLTGIQGRCVPAALSGRDLLAEAKTGSGKTLAFLIPIVEIV--T 170
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRK 516
R K+G A+II PTREL LQ + +L K F+ V GG E ++
Sbjct: 171 RSGFRPKNGTAAIIIGPTRELCLQIEGVLLRLLKYFSGSVTFLCCIGGLSRSQEAFKLVS 230
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
G+ I++ATPGRLLDH K T + L +DEADR+LD G+E D+ E + L KQ+
Sbjct: 231 GMMIVMATPGRLLDHLKLTTDWLTKHLLVLAVDEADRVLDNGFEEDMREIVSSLPKQR-- 288
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q+ L SAT T V++LA ++ P + + T D+L +Q ++V P +
Sbjct: 289 -QTFLFSATQTTRVEQLARVSFYRPPLFISMKRKEDKATVDTL------EQGYVVCPSEQ 341
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
RL+ L F V + + KM+VF ++++ +H EL + + +AF HG Q
Sbjct: 342 RLLVLYHF-------VKRNVKKKMIVFFSSRNAVSFHCELFNYIDVPCVAF---HGKQKQ 391
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R+ + F + SGVL TDVAARGLD+P VDWIVQ+ P YVHRVGRTAR G
Sbjct: 392 HQRSATYMQFCNAPSGVLFTTDVAARGLDIPEVDWIVQFDPPDDPVKYVHRVGRTARAGR 451
Query: 757 EGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G++L+FL+P E ++ L + + + E + +SVK+ L +L + N
Sbjct: 452 TGNALMFLLPQEKLFLKYLHDDANVTVSEFVFD---PSKISVKVSEQLEQLVNANY---- 504
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
L TSA Y ++ Y+ S L+++FN + L AK FAL
Sbjct: 505 ---------------YLRTSARLAYEGYLLSYS--SSQLKNVFNIHNLDLAAVAKGFALS 547
Query: 876 DAP 878
+ P
Sbjct: 548 EPP 550
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 100/175 (57%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q + L G D+L ++TGSGKTLA+ IPI++ + R K+G A+II
Sbjct: 129 KLTGIQGRCVPAALSGRDLLAEAKTGSGKTLAFLIPIVEIV--TRSGFRPKNGTAAIIIG 186
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLT-GGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + +L K F+ V GG E ++ G+ I++ATPGRLLDH
Sbjct: 187 PTRELCLQIEGVLLRLLKYFSGSVTFLCCIGGLSRSQEAFKLVSGMMIVMATPGRLLDHL 246
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + L KQ+ Q+ L SAT T
Sbjct: 247 KLTTDWLTKHLLVLAVDEADRVLDNGFEEDMREIVSSLPKQR---QTFLFSATQT 298
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
L +DEADR+LD G+E D+ E + L KQ+ Q+ L SAT T V++LA ++ P
Sbjct: 260 LAVDEADRVLDNGFEEDMREIVSSLPKQR---QTFLFSATQTTRVEQLARVSFYRPPLFI 316
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ + T D+L+Q ++V P + RL+ L F V + + KM+VF +
Sbjct: 317 SMKRKEDKATV------DTLEQGYVVCPSEQRLLVLYHF-------VKRNVKKKMIVFFS 363
Query: 318 TQDMADYHTELLS 330
+++ +H EL +
Sbjct: 364 SRNAVSFHCELFN 376
>gi|340505359|gb|EGR31696.1| hypothetical protein IMG5_104100 [Ichthyophthirius multifiliis]
Length = 573
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 261/471 (55%), Gaps = 48/471 (10%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +T +Q SI +L G D+L ++TGSGKTLA+ IP I+ L+ + +++ G +I
Sbjct: 114 FTYMTPIQHKSIPFLLKGRDILGAAKTGSGKTLAFLIPAIENLK--KNDFTQQKGSGIII 171
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
I PTRELA Q ++ ++ + + L GG K+E ++R GI+++++TPGRLLDH
Sbjct: 172 ITPTRELATQIFDVAKEIIFNHDLTL-GLLIGGTNRKAEATKLRLGINLIISTPGRLLDH 230
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
++T FS ++ L++DEAD I+ G+E ++ E L+IL K+ Q + L SAT+T ++
Sbjct: 231 LQNTSNFIFSNLKTLIIDEADAIMKIGFEEELNEILKILPKENRQ--TALFSATITKQIE 288
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA ++L+ P+ I ++++I + L+Q +I+ +L L +F+ Q
Sbjct: 289 NLAKLSLKQPLYIGLDENSEISTV-------EGLEQGYIILDTDKKLRFLYTFL----QK 337
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
+D +K++VF ++ D +H+E L+ V +I ++HG + Q+ R F F + +
Sbjct: 338 YKKD--NKIMVFFSSCDSVKFHSEFLNFV---DIPNLQIHGKLKQNNRLNTFYQFINEEK 392
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH--EGSSLLFLIPSEV 769
+L+CTDV ARGLD P V+WIVQY P + +Y+HRVGRT R + G L+FL +E
Sbjct: 393 CILLCTDVVARGLDFPKVNWIVQYDPPEDTKEYIHRVGRTCRGANNQNGKGLIFLQKNET 452
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
+ + L+N +++++E+ + ++AD +Q V +
Sbjct: 453 EYLSLLENAKVKMKELVFPE--------------EKIAD---------IQKQIFMVVQKN 489
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K A G+ S V Y +S L++IFN ++++L A + L +AP +
Sbjct: 490 KQFQKLAYDGFKSCVFAYQHHS--LKNIFNIRKLNLQKLAFGYGLENAPQI 538
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 126/214 (58%), Gaps = 13/214 (6%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T +T +Q SI +L G D+L ++TGSGKTLA+ IP I+ L+ + +++ G +I
Sbjct: 114 FTYMTPIQHKSIPFLLKGRDILGAAKTGSGKTLAFLIPAIENLK--KNDFTQQKGSGIII 171
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA Q ++ ++ + + L GG K+E ++R GI+++++TPGRLLDH
Sbjct: 172 ITPTRELATQIFDVAKEIIFNHDLTL-GLLIGGTNRKAEATKLRLGINLIISTPGRLLDH 230
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
++T FS ++ L++DEAD I+ G+E ++ E L+IL K+ Q+ L SAT+T
Sbjct: 231 LQNTSNFIFSNLKTLIIDEADAIMKIGFEEELNEILKILPKENR--QTALFSATITKQ-- 286
Query: 183 WCKHTETLKFSKVEHLVLDEADRI-----LDQGY 211
++ L + ++ LDE I L+QGY
Sbjct: 287 -IENLAKLSLKQPLYIGLDENSEISTVEGLEQGY 319
>gi|260791488|ref|XP_002590761.1| hypothetical protein BRAFLDRAFT_218590 [Branchiostoma floridae]
gi|229275957|gb|EEN46772.1| hypothetical protein BRAFLDRAFT_218590 [Branchiostoma floridae]
Length = 372
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 224/372 (60%), Gaps = 32/372 (8%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M+ T +T +Q SI P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 28 MSFTCMTEIQAKSIPPLLEGRDILAAAKTGSGKTLAFLIPAVELMYKL--KFMPRNGTGV 85
Query: 470 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+++ PTRELA+QT + +L C ++ I+ GG SE ++ KGI+I+VATP
Sbjct: 86 IVLSPTRELAMQTYGVLKELLKYHCHTYGLIM-----GGTSRSSEADKLAKGINIVVATP 140
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++T F ++ LV+DEADRIL+ G+E ++ + + +L K++ Q++L SAT
Sbjct: 141 GRLLDHMQNTPQFMFKNLQCLVIDEADRILEVGFEEELKQIVRLLPKRR---QTMLFSAT 197
Query: 586 LTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T ++ LA ++L+ P+ + D+ D + L+Q ++V P + R + L +F
Sbjct: 198 QTRKIEDLARVSLKREPLYVGVDDNKDQATV-------EGLEQGYVVCPSEKRFLLLFTF 250
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ ++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F
Sbjct: 251 L-------KKNRKKKIMVFFSSCMSVKYHYELLNYI---DLPVMAIHGRQKQTKRTTTFF 300
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
F + +G L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR G G +LL L
Sbjct: 301 QFCNSDTGTLLCTDVAARGLDIPAVDWIVQFDPPDDPKEYIHRVGRTARAGGRGHALLIL 360
Query: 765 IPSEVKLVEELQ 776
P E+ + L+
Sbjct: 361 RPEELGFLRYLK 372
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 118/182 (64%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+ T +T +Q SI P+L+G D+L ++TGSGKTLA+ IP ++ + ++ K ++G
Sbjct: 28 MSFTCMTEIQAKSIPPLLEGRDILAAAKTGSGKTLAFLIPAVELMYKL--KFMPRNGTGV 85
Query: 61 VIILPTRELALQTLEIFTKL----CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+++ PTRELA+QT + +L C ++ I+ GG SE ++ KGI+I+VATP
Sbjct: 86 IVLSPTRELAMQTYGVLKELLKYHCHTYGLIM-----GGTSRSSEADKLAKGINIVVATP 140
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T F ++ LV+DEADRIL+ G+E ++ + + +L K++ Q++L SAT
Sbjct: 141 GRLLDHMQNTPQFMFKNLQCLVIDEADRILEVGFEEELKQIVRLLPKRR---QTMLFSAT 197
Query: 177 LT 178
T
Sbjct: 198 QT 199
>gi|301093251|ref|XP_002997474.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262110730|gb|EEY68782.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 489
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 240/405 (59%), Gaps = 27/405 (6%)
Query: 382 VSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSG 441
V E F+ + P P K ++ M T++T +Q SI+P+L G D+L ++TGSG
Sbjct: 97 VDERYFSSEEFASLPLSEPTRKALVD--MGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSG 154
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
KTL++ IP ++ L ++R + + G ++I PTRELALQ + +CK + +
Sbjct: 155 KTLSFLIPAVELLHKVR--FTARKGTGCIVISPTRELALQIYGVVRDICKYHSQ-THGIV 211
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
GG ++E R+ KG++IL++TPGRLLDH ++T+ + ++ LV+DEADRIL G+E
Sbjct: 212 MGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEE 271
Query: 562 DIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLV 620
++ + ++ + K++ Q++L SAT T V+ LA +++ + P+ + + D+
Sbjct: 272 EMRQIIKCIPKER---QTMLFSATQTKKVEDLARLSIKEKPVYVGVEEE-------DTKA 321
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
+L+Q ++VTP R + L +F+ ++ + K++VF ++ ++ ELL+ +
Sbjct: 322 TVATLEQGYVVTPSDKRFLLLFTFL-------KKNLKKKVMVFFSSCSAVKFYGELLNYI 374
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
+I +HG Q++RT F F + K+G+L+CTDVAARGLD+P VDWI+Q+ P
Sbjct: 375 ---DIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDD 431
Query: 741 STDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+Y+HRVGRTAR +G +LL L+P E+ ++ L+ ++ + E
Sbjct: 432 PREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNE 476
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q SI+P+L G D+L ++TGSGKTL++ IP ++ L ++R + + G
Sbjct: 123 MGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVR--FTARKGTGC 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +CK + + GG ++E R+ KG++IL++TPGRLL
Sbjct: 181 IVISPTRELALQIYGVVRDICKYHSQ-THGIVMGGANRRAEAERLVKGVNILISTPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + ++ LV+DEADRIL G+E ++ + ++ + K++ Q++L SAT T
Sbjct: 240 DHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKER---QTMLFSATQT 294
>gi|150951242|ref|XP_001387532.2| ATP-dependent RNA helicase DBP4 (Helicase CA4) (Helicase UF1)
[Scheffersomyces stipitis CBS 6054]
gi|284018077|sp|A3GGE9.2|DBP4_PICST RecName: Full=ATP-dependent RNA helicase DBP4
gi|149388432|gb|EAZ63509.2| ATP-dependent RNA helicase DBP4 (Helicase CA4) (Helicase UF1)
[Scheffersomyces stipitis CBS 6054]
Length = 765
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 267/501 (53%), Gaps = 49/501 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
+ LNE + +T +Q+ +I L G D++ ++TGSGKTLA+ IP+++ L +R KI+
Sbjct: 60 RGLNES-SFMSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVVESL--IRNKITE 116
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+I+ PTRELA+QT E+ TK+ K T+ +TGG+ ++ EK R+ + ++ILV
Sbjct: 117 HDGLAALIVSPTRELAVQTFEVLTKIGKYNTFSA-GLVTGGKDVQYEKERVSR-MNILVG 174
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+ H ++ S ++ LVLDEADR LD G+++ I + L P Q++L S
Sbjct: 175 TPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIVGHLP---PTRQTLLFS 231
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT++ +V+ LA ++L NP +I + D+ T P+SL Q++I P +L L S
Sbjct: 232 ATVSDSVKDLARLSLTNPKRIGVSSDQDVSAT------PESLDQYYIRIPLDEKLDVLWS 285
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SK+LVF ++ Y E T L I+ KL+G Q+ R E
Sbjct: 286 FIKSHLK-------SKILVFFSSSKQVQYAYETFRT-LQPGISLLKLYGRHKQTSRLETT 337
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TD+ ARGLD P +DW+VQ P + YVHRVGR AR G +G SLL
Sbjct: 338 VKFTQAQYACLFATDIVARGLDFPAIDWVVQVDCPEDAVTYVHRVGRAARFGRQGKSLLM 397
Query: 764 LIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L+PSE + +++ L+N +I + + +K + + +++
Sbjct: 398 LLPSEEEGMLKRLENNKIEPKFMNIK-----------------------QKSKKSIRPQL 434
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-I 881
+S + ++ + + S+ + + Y + + +F +++ +A S L AP + I
Sbjct: 435 QSLCFKDPMIKNLGQRAFISY--YKSVYIQKDKDVFKVEELPSEKYAASLGLPGAPKIKI 492
Query: 882 SGIGKPKNKEELKNKKMAINK 902
G K K+ + +A++K
Sbjct: 493 KGGSSSKEKKNASRQLVALSK 513
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 113/173 (65%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+++ L +R KI+ DG+ A+I+ P
Sbjct: 70 LTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVVESL--IRNKITEHDGLAALIVSP 127
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+QT E+ TK+ K T+ +TGG+ ++ EK R+ + ++ILV TPGR+ H
Sbjct: 128 TRELAVQTFEVLTKIGKYNTFSA-GLVTGGKDVQYEKERVSR-MNILVGTPGRISQHLNE 185
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ S ++ LVLDEADR LD G+++ I + L P Q++L SAT++
Sbjct: 186 AVGMETSNLQVLVLDEADRCLDMGFKKQIDNIVGHL---PPTRQTLLFSATVS 235
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I + L P Q++L SAT++ +V+ LA ++
Sbjct: 189 METSNLQVLVLDEADRCLDMGFKKQIDNIVGHLP---PTRQTLLFSATVSDSVKDLARLS 245
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + D+ T P+SL Q++I P +L L SFI +
Sbjct: 246 LTNPKRIGVSSDQDVSAT------PESLDQYYIRIPLDEKLDVLWSFIKSHLK------- 292
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 293 SKILVFFSSSKQVQYAYETFRT 314
>gi|323450950|gb|EGB06829.1| hypothetical protein AURANDRAFT_10453, partial [Aureococcus
anophagefferens]
Length = 511
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 263/483 (54%), Gaps = 57/483 (11%)
Query: 383 SEALFAPTSYEEFP---GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTG 439
+ ++F+ T ++ P G +K M + +++ +Q +I P+L+G D+L ++TG
Sbjct: 10 ATSMFSETRFDSLPLTDGTQAALK-----AMGLERLSKIQDKAIPPLLEGRDLLGNAKTG 64
Query: 440 SGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCK-SFTWIVP 498
SGKTLA+ IP+++ L + R ++ G+ ++I PTREL+LQ + +L +
Sbjct: 65 SGKTLAFLIPLVELLTKAR--FQQRSGLGGLVISPTRELSLQIYGVLRELLSVAKHGHTH 122
Query: 499 SWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQG 558
+ GG + E R+ KG+ ILVATPGRLLDH ++T F + V DEADRIL+QG
Sbjct: 123 GLVIGGANRRGEAERLGKGVCILVATPGRLLDHLQNTSGFVFKNLLMFVCDEADRILEQG 182
Query: 559 YERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTD 617
+E D+ + L + Q+ L SAT T V+ LA + +++ P+ + D+ TT
Sbjct: 183 FEDDLRGIVRCLPGTR---QTALFSATQTRKVEDLARLAIKSEPVYVGVHDA----ETTS 235
Query: 618 SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 677
++ L+Q ++V P R L SF+ ++ K++VF ++ + ++ +LL
Sbjct: 236 TVA---GLEQGYVVVEPGDRFRLLFSFL------KRHAKKHKVMVFFSSCNAVKFYADLL 286
Query: 678 STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
+ V ++ +HG Q++RT F F SGVL+CTDVAARGLD+P V WIVQY
Sbjct: 287 NYV---DVPVLDIHGRQKQAKRTATFFEFCRATSGVLLCTDVAARGLDIPKVHWIVQYDP 343
Query: 738 PSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P +Y+HRVGRTAR G +G +LLFLIPSE+ ++ L+ ++ + E +
Sbjct: 344 PDDPREYIHRVGRTARGGDGDGKALLFLIPSELGFLKFLRAAKVALHEYEFA-------- 395
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ ++A NV++A T L V + LH +A Y S++ YAS+ +
Sbjct: 396 ------VGKVA--NVQSALTKL-------VEKNYYLHKAAKDAYRSYLLAYASHGH--KD 438
Query: 857 IFN 859
+FN
Sbjct: 439 VFN 441
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + +++ +Q +I P+L+G D+L ++TGSGKTLA+ IP+++ L + R ++ G+
Sbjct: 35 MGLERLSKIQDKAIPPLLEGRDLLGNAKTGSGKTLAFLIPLVELLTKAR--FQQRSGLGG 92
Query: 61 VIILPTRELALQTLEIFTKLCK-SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
++I PTREL+LQ + +L + + GG + E R+ KG+ ILVATPGRL
Sbjct: 93 LVISPTRELSLQIYGVLRELLSVAKHGHTHGLVIGGANRRGEAERLGKGVCILVATPGRL 152
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LDH ++T F + V DEADRIL+QG+E D+ + L + Q+ L SAT T
Sbjct: 153 LDHLQNTSGFVFKNLLMFVCDEADRILEQGFEDDLRGIVRCLPGTR---QTALFSATQT 208
>gi|342184287|emb|CCC93768.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 610
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 246/483 (50%), Gaps = 47/483 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
++P + L Q+T +Q + L G D+L ++TGSGKTLA+ IPI++ +
Sbjct: 122 LNPHIVTALQNDFKFDQLTGIQGRCLPAALAGRDLLAEAKTGSGKTLAFLIPIVEII--T 179
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTW-IVPSWLTGGEKMKSEKARIRK 516
R ++ G A++I PTREL LQ + KL K F I GG E ++
Sbjct: 180 RAGFRQRSGTAAIVIGPTRELCLQIEGVLLKLLKHFNGSITFLCCIGGISRSQEAFKLVS 239
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
G+ +++ATPGRLLDH K T + L +DEADR+LD G+E D+ E + +L KQ+
Sbjct: 240 GMMVVIATPGRLLDHLKLTTDWHTKNLLVLAVDEADRVLDNGFEEDMREIVSLLPKQR-- 297
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q+ L SAT T V++LA ++ P + + T D+L +Q +++ P +
Sbjct: 298 -QTFLFSATQTTRVEQLARVSFYRPPLFISMKRKEDKATVDTL------EQGYVMCPSEQ 350
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
RL+ L F V + + K++VF ++++ +H EL + + +AF HG Q
Sbjct: 351 RLLVLYHF-------VRRNLKKKVIVFFSSRNAVSFHCELFNYIDVPCVAF---HGKQKQ 400
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R+ + F + SGVL TDVAARGLD+P VDWIVQ+ P YVHRVGRTAR G
Sbjct: 401 HQRSATYMQFCNAPSGVLFTTDVAARGLDIPQVDWIVQFDPPDDPVKYVHRVGRTARAGR 460
Query: 757 EGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G++L+FL+P E ++ L + + + E DLS++ VE
Sbjct: 461 SGNALMFLLPQEKLFLKYLHDDAHVTVSEYTF--------------DLSKVKGNVVE--- 503
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
E V L SA Y ++ Y+ S L+++FN + L AK FAL+
Sbjct: 504 -----QLEELVNANYYLRASARLAYEGYLLSYS--SSQLKNVFNIHNLDLAAVAKGFALK 556
Query: 876 DAP 878
+ P
Sbjct: 557 EPP 559
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 6/175 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q+T +Q + L G D+L ++TGSGKTLA+ IPI++ + R ++ G A++I
Sbjct: 138 QLTGIQGRCLPAALAGRDLLAEAKTGSGKTLAFLIPIVEII--TRAGFRQRSGTAAIVIG 195
Query: 65 PTRELALQTLEIFTKLCKSFTW-IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + KL K F I GG E ++ G+ +++ATPGRLLDH
Sbjct: 196 PTRELCLQIEGVLLKLLKHFNGSITFLCCIGGISRSQEAFKLVSGMMVVIATPGRLLDHL 255
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L KQ+ Q+ L SAT T
Sbjct: 256 KLTTDWHTKNLLVLAVDEADRVLDNGFEEDMREIVSLLPKQR---QTFLFSATQT 307
>gi|240281972|gb|EER45475.1| ATP-dependent RNA helicase HAS1 [Ajellomyces capsulatus H143]
Length = 542
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 267/490 (54%), Gaps = 42/490 (8%)
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELLST---KKKIKKLKEYNIDPDNYEIPKKT 354
LGK NE+E L T D A+ EL + +K KE +D D K T
Sbjct: 78 LGKIAKANEEEPDPEL---ETTDEAE-QVELPQSSAGEKDGDTDKEQEVDSDEEGEEKPT 133
Query: 355 EVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQ 414
KS ++ ++P+V L P +EA P + E MK + M
Sbjct: 134 NGKSN------EDQLELPSVNAVSL-PQTEA--EPQKFSELNLSDKTMKAIAD--MKFET 182
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G +++ P
Sbjct: 183 MTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGVIVVSP 240
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLLDH ++
Sbjct: 241 TRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAGKLTKGVNLLIATPGRLLDHLQN 299
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T V+ LA
Sbjct: 300 TQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE--DRQTMLFSATQTTKVEDLA 357
Query: 595 GMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
++L Q P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 358 RISLRQGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL-------K 403
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
+ + K++VF ++ + YH ELL+ + ++ L+G Q +RT F F + G
Sbjct: 404 RNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLYGKQKQQKRTNTFFEFCNATQGT 460
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLV 772
LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL PSEV +
Sbjct: 461 LICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPSEVGFL 520
Query: 773 EELQNRRIRI 782
+ L+ R+ +
Sbjct: 521 KHLKEARVPV 530
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 178 MKFETMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 235
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 236 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAGKLTKGVNLLIATPGRLL 294
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 295 DHLQNTQGFVFKNLKALVIDEADRILEVGFEDEMRQIIKILPAE--DRQTMLFSATQT 350
>gi|294948517|ref|XP_002785780.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
gi|239899848|gb|EER17576.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
Length = 579
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 270/512 (52%), Gaps = 63/512 (12%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N T +T +Q +I +L G DVL ++TGSGKTLA+ +P ++ L R K+G +
Sbjct: 104 NFTTMTDIQAKAIPLMLKGKDVLGAAKTGSGKTLAFLVPALELLVATR--FQPKNGTGVM 161
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVP---SWLTGGEKMKSEKARIRKGISILVATPGR 527
+I PTRELA+Q ++ CK ++ + GG K+E ++ +GI+I+VATPGR
Sbjct: 162 VISPTRELAMQIYDV----CKRVVVVLSQTYGIVMGGVNRKNEADKLSRGINIIVATPGR 217
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T ++ + LV+DEADRIL G+E D+ + L+IL K++ Q+ L SAT T
Sbjct: 218 LLDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKR---QTSLFSATQT 274
Query: 588 PAVQRLAGMTLQNPI--QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
V LA ++L+ PI Q AD +T LV Q ++V RL L +F+
Sbjct: 275 QKVNDLARLSLKKPIFVQSKGADDDAAISTASGLV------QGYVVVGGDDRLRLLFTFL 328
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKT 705
++++ K++VF ++ + +H ELL+ + +I +HG QS R F
Sbjct: 329 -------KKNQKKKVMVFFSSCNSVKFHDELLNYI---DIPVISIHGQKKQSARMTNFYR 378
Query: 706 FRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLLF 763
F ++SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G EG+ +LLF
Sbjct: 379 FCQMESGILLCTDVAARGLDIPKVDWIVQYDPPDDPKEYIHRVGRTAR-GAEGTGKALLF 437
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATA-LQMSF 822
L+P E+ + L+ + ++ L + A A +Q
Sbjct: 438 LMPEELGFLRYLR-----------------------KSGVTTLNEYVFPPAKVANIQHQL 474
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASY-SKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
E V LH ++ Y S++ YA++ SKD F+ + L AK F P V
Sbjct: 475 EKLVETNYHLHRASRDAYRSYLHAYAAHASKD---CFDVHSLDLQKLAKCFGFAVPPKVD 531
Query: 882 SGIGKPKNKEELKNKKMAINKEKSFKQRGNFS 913
+ K K + +KM + + K +G+FS
Sbjct: 532 LNL-KDTKKSDRGGRKM-VKSGRFNKGQGDFS 561
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 111/180 (61%), Gaps = 12/180 (6%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N T +T +Q +I +L G DVL ++TGSGKTLA+ +P ++ L R K+G +
Sbjct: 104 NFTTMTDIQAKAIPLMLKGKDVLGAAKTGSGKTLAFLVPALELLVATR--FQPKNGTGVM 161
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVP---SWLTGGEKMKSEKARIRKGISILVATPGR 118
+I PTRELA+Q ++ CK ++ + GG K+E ++ +GI+I+VATPGR
Sbjct: 162 VISPTRELAMQIYDV----CKRVVVVLSQTYGIVMGGVNRKNEADKLSRGINIIVATPGR 217
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T ++ + LV+DEADRIL G+E D+ + L+IL K++ Q+ L SAT T
Sbjct: 218 LLDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKR---QTSLFSATQT 274
>gi|344304870|gb|EGW35102.1| hypothetical protein SPAPADRAFT_69435 [Spathaspora passalidarum
NRRL Y-27907]
Length = 755
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/493 (33%), Positives = 257/493 (52%), Gaps = 46/493 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N +T +Q+ +I L G DV+ ++TGSGKTLA+ +P I+ L +R KI+ DG+ A+
Sbjct: 65 NFVSLTDIQRKTIPIALKGEDVMGTARTGSGKTLAFLVPTIESL--IRNKITEFDGLAAL 122
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I+ PTRELA+Q E+ TK+ K + +TGG+ +K EK R+ + ++ILV TPGR+
Sbjct: 123 IVSPTRELAVQIFEVLTKIGK-YNQFSAGLVTGGKDVKYEKERVSR-MNILVGTPGRISQ 180
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H ++ S ++ LVLDEADR LD G+++ I L L P Q++L SAT + V
Sbjct: 181 HLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLP---PTRQTLLFSATQSDNV 237
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L NP +I + +I T P+SL+Q+++ P +L L SFI +
Sbjct: 238 KDLARLSLTNPQRIGVSSDQEISAT------PESLEQYYVKVPLDEKLDVLWSFIKSHLK 291
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK+LVF ++ Y E T L I+ KL+G Q+ R E F +
Sbjct: 292 -------SKILVFFSSSKQVQYTYETFRT-LQPGISLLKLYGRHKQTSRLETTMKFSQAQ 343
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
L TD+ ARGLD P +DW+VQ P + YVHRVGR+AR G +G SL+ L+PSE
Sbjct: 344 YACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRQGKSLMMLLPSE-- 401
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
EE +R++I +I K +++K + + +++ +S +
Sbjct: 402 --EEGMLKRLKIHKIDPK-----FMNIK-------------QKSKKSIRPQLQSLCFKDP 441
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKN 889
+ + + S+ R KD + IF ++ FA S L AP + I G K
Sbjct: 442 TIKNLGQRAFISYFR-SVHIQKD-KDIFKIDELPAEKFAASLGLPGAPKIKIKGGADNKE 499
Query: 890 KEELKNKKMAINK 902
K+ K +A+ K
Sbjct: 500 KKNASRKLLALAK 512
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +T +Q+ +I L G DV+ ++TGSGKTLA+ +P I+ L +R KI+ DG+ A+
Sbjct: 65 NFVSLTDIQRKTIPIALKGEDVMGTARTGSGKTLAFLVPTIESL--IRNKITEFDGLAAL 122
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA+Q E+ TK+ K + +TGG+ +K EK R+ + ++ILV TPGR+
Sbjct: 123 IVSPTRELAVQIFEVLTKIGK-YNQFSAGLVTGGKDVKYEKERVSR-MNILVGTPGRISQ 180
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H ++ S ++ LVLDEADR LD G+++ I L L P Q++L SAT
Sbjct: 181 HLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHL---PPTRQTLLFSAT 232
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I L L P Q++L SAT + V+ LA ++
Sbjct: 188 METSNLQVLVLDEADRCLDMGFKKQIDNILGHLP---PTRQTLLFSATQSDNVKDLARLS 244
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + +I T P+SL+Q+++ P +L L SFI +
Sbjct: 245 LTNPQRIGVSSDQEISAT------PESLEQYYVKVPLDEKLDVLWSFIKSHLK------- 291
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 292 SKILVFFSSSKQVQYTYETFRT 313
>gi|340503456|gb|EGR30044.1| hypothetical protein IMG5_143800 [Ichthyophthirius multifiliis]
Length = 489
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 265/507 (52%), Gaps = 64/507 (12%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I +L G DVL ++TGSGKTLA+ IP I+ L + R ++ G +II P
Sbjct: 1 MTHIQSRTIPNLLKGRDVLGAAKTGSGKTLAFLIPAIELLYKAR--FMQQQGTGIIIITP 58
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA Q ++ +K F L GG K E +++ G++I+VATPGRLLDH ++
Sbjct: 59 TRELAQQIFDV-SKQVLQFHQKTVGLLIGGTNRKQEAIKLKVGLNIIVATPGRLLDHLQN 117
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T+ + + LV+DEAD IL G+E ++ + L+I+ K + Q+IL SAT T + LA
Sbjct: 118 TQGFVYHNLLGLVIDEADAILKIGFEEELTQILKIIPKDR---QTILFSATQTKKIDELA 174
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L +PI I D + + L+Q F+ R L +F+ +
Sbjct: 175 RLSLNSPIYIGVDDIAETATV-------EGLEQGFVFVESDKRFRLLFTFL-------QK 220
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+ K++VF ++ + +H +LL+ V ++ ++HG Q +R F F +V VL
Sbjct: 221 QKNKKIMVFFSSCNSVKFHADLLNYV---DVPVLEIHGKQKQQKRLNTFYEFCNVDKAVL 277
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVE 773
+CTDVAARGLD+P VDWIVQ+ P + +Y+HRVGRT R + G +LLFL+P E + ++
Sbjct: 278 LCTDVAARGLDIPKVDWIVQFDPPDDTKEYIHRVGRTCRGANANGKALLFLLPEENQYLK 337
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++ + E + + S+LAD +Q F+ + + L+
Sbjct: 338 YLKAAKVNLNEYEFPE--------------SKLAD---------IQDQFDRLIERNYFLN 374
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
A + + S++ YAS+ +L+ IF+ + L ++F + P V
Sbjct: 375 KCANEAFKSYLHAYASH--NLKDIFDVANLDLQKVGRAFGFKIPPRV------------- 419
Query: 894 KNKKMAINKEK-SFKQRGNFSKKQMLS 919
N + IN + +KQ NF+K LS
Sbjct: 420 -NLSIFINLQHFYYKQYFNFTKDVKLS 445
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 106/173 (61%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I +L G DVL ++TGSGKTLA+ IP I+ L + R ++ G +II P
Sbjct: 1 MTHIQSRTIPNLLKGRDVLGAAKTGSGKTLAFLIPAIELLYKAR--FMQQQGTGIIIITP 58
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q ++ +K F L GG K E +++ G++I+VATPGRLLDH ++
Sbjct: 59 TRELAQQIFDV-SKQVLQFHQKTVGLLIGGTNRKQEAIKLKVGLNIIVATPGRLLDHLQN 117
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T+ + + LV+DEAD IL G+E ++ + L+I+ K + Q+IL SAT T
Sbjct: 118 TQGFVYHNLLGLVIDEADAILKIGFEEELTQILKIIPKDR---QTILFSATQT 167
>gi|308159014|gb|EFO61568.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 625
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 283/555 (50%), Gaps = 48/555 (8%)
Query: 377 RRLKPVSE---ALF-APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDV 432
R ++P+ + ALF + S+ E GIH + + L + + I T +QQ +I I+ G DV
Sbjct: 50 RSVEPIRKQDGALFESGKSFSEL-GIHEQICEILKDKLQICNPTFIQQQAIPRIMSGEDV 108
Query: 433 LVRSQTGSGKTLAYAIPIIQKL----QEMRPKISRKD--GIYAVIILPTRELALQTLEIF 486
++++QTGSGKTLA+ +PI+ KL Q+ P +++ +II PT+ELA+Q+ E+
Sbjct: 109 ILKAQTGSGKTLAFLLPILTKLLIDYQQRGPSTFKREEWASKVLIISPTKELAMQS-ELV 167
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
S T +V L G EKA +RKGI+++ TPGR+ DH T K + ++ +
Sbjct: 168 VASLLSRTMMVSGSLIGAVPRDKEKASLRKGITVISGTPGRIQDHLNQTACFKLTNIQVV 227
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA 606
VLDE D+++ G+ + L + P+ Q IL SAT V +++ I I
Sbjct: 228 VLDECDQLISHGFSSALQTILSHAHEANPKLQVILASATADRRVLDFVRSSVREAIPIGD 287
Query: 607 ADSTDI-----HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES-KM 660
ST+ V P SL Q F + P K+RL L S + + ++ + + ++
Sbjct: 288 LFSTESVKAQPETGLAKAVTPASLVQKFCIVPSKMRLALLISTLAFETAKASDFKTAVRI 347
Query: 661 LVFMATQDMADYHTELLSTVLGENIA--------FFKLHGSMSQSERTEVFKTFRSVKSG 712
LVF T+D+ E+L + + F LHGS+ +R V+ F G
Sbjct: 348 LVFAETKDVCSLLNEILMRLSEAETSEDHFILAKIFHLHGSLGVEDRQIVWHKFLE-SGG 406
Query: 713 VLICTDVAARGLDLPL---------VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
+L+ TDVAARGL+L VD ++Q+ APSS YVHRVGR R+G G S+LF
Sbjct: 407 ILVATDVAARGLNLGSGTLSSGLHGVDLVIQFEAPSSCEQYVHRVGRAGRMGQRGRSILF 466
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+ +E LV L + I + + + +L + RL + +Q E
Sbjct: 467 LLENEAGLVPLLGSYGIALAATPVDALAERVLEYRKP---IRLME--------RVQTKVE 515
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+ K L A + ++ +++ Y+ S ++RHIFN K +HLGH AK F L + PS + G
Sbjct: 516 ELITSDKELRRMAVQAFSMYIKGYSMKSSNVRHIFNLKSLHLGHIAKGFGLSEPPSKVLG 575
Query: 884 IGKPKNKEELKNKKM 898
+P +K+++K +M
Sbjct: 576 EFRP-SKKQIKEARM 589
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 104/182 (57%), Gaps = 7/182 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL----QEMRPKISRKD 56
+ I T +QQ +I I+ G DV++++QTGSGKTLA+ +PI+ KL Q+ P +++
Sbjct: 86 LQICNPTFIQQQAIPRIMSGEDVILKAQTGSGKTLAFLLPILTKLLIDYQQRGPSTFKRE 145
Query: 57 --GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
+II PT+ELA+Q+ E+ S T +V L G EKA +RKGI+++
Sbjct: 146 EWASKVLIISPTKELAMQS-ELVVASLLSRTMMVSGSLIGAVPRDKEKASLRKGITVISG 204
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGR+ DH T K + ++ +VLDE D+++ G+ + L + P+ Q IL S
Sbjct: 205 TPGRIQDHLNQTACFKLTNIQVVVLDECDQLISHGFSSALQTILSHAHEANPKLQVILAS 264
Query: 175 AT 176
AT
Sbjct: 265 AT 266
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T K + ++ +VLDE D+++ G+ + L + P+ Q +L SAT V
Sbjct: 215 QTACFKLTNIQVVVLDECDQLISHGFSSALQTILSHAHEANPKLQVILASATADRRVLDF 274
Query: 246 AGMTLQNPIQIDAADSTDI-----HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+++ I I ST+ V P SL Q F + P K+RL L S + +
Sbjct: 275 VRSSVREAIPIGDLFSTESVKAQPETGLAKAVTPASLVQKFCIVPSKMRLALLISTLAFE 334
Query: 301 CQNVNEDEES-KMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDPDNYEIPK 352
++ + + ++LVF T+D+ E+L +L E D++ + K
Sbjct: 335 TAKASDFKTAVRILVFAETKDVCSLLNEIL------MRLSEAETSEDHFILAK 381
>gi|302811016|ref|XP_002987198.1| hypothetical protein SELMODRAFT_158505 [Selaginella moellendorffii]
gi|300145095|gb|EFJ11774.1| hypothetical protein SELMODRAFT_158505 [Selaginella moellendorffii]
Length = 493
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 264/522 (50%), Gaps = 56/522 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
KN + T +T +Q SI +L G DVL ++TGSGKTLA+ +P ++ L R
Sbjct: 17 KNAIAEIGFTNMTEIQSRSIPELLKGRDVLGAARTGSGKTLAFLVPAVELLYHAR--FMP 74
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTRELA+Q + KL K + + GG K E ++KG+++LV+
Sbjct: 75 RNGTGVLIISPTRELAMQIYGVARKLMKHHSQ-THGIVMGGVKRNVEAEALKKGVNLLVS 133
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E D+ + +++L K++ Q++L S
Sbjct: 134 TPGRLLDHLQNTKGFLFKNLQCLVIDEADRILEIGFEEDMKQIIKLLPKER---QTVLFS 190
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++ + PI I D S + L+Q + V R + L
Sbjct: 191 ATQTTKVEDLAKLSFKKAPIYIGVDDER-------SKATVEGLEQGYCVVKTDKRFLLLF 243
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ + +H ELL+ + +I +HG Q +RT
Sbjct: 244 TFL-------KKNLKKKVMVFFSSCNSVKFHGELLNFI---DIPCLDIHGKQKQQKRTNT 293
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
+ F + + G+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G +L
Sbjct: 294 YFEFCNAEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGESGRGRAL 353
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL P E+ L ++ + E E +Q
Sbjct: 354 LFLTPEELGFKRYLTMAKVPLNEYMFP-----------------------ENKIANVQSQ 390
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP--- 878
E+ + + LH SA Y S++ Y S++ ++ FN ++ L A SF P
Sbjct: 391 LENLIGKNYNLHRSARDAYRSYIMAYNSHA--MKDAFNVHRLDLQAVAASFGFSCPPKIN 448
Query: 879 --SVISGIGK-PKNKEELKNKKMAINKEKSFKQRGNFSKKQM 917
S+ S K K +E K+ + +RG K+Q
Sbjct: 449 NLSIDSSAAKFRKQGKERKSSGHKFGASNPYGKRGEDDKRQF 490
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T +Q SI +L G DVL ++TGSGKTLA+ +P ++ L R ++G
Sbjct: 23 IGFTNMTEIQSRSIPELLKGRDVLGAARTGSGKTLAFLVPAVELLYHAR--FMPRNGTGV 80
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA+Q + KL K + + GG K E ++KG+++LV+TPGRLL
Sbjct: 81 LIISPTRELAMQIYGVARKLMKHHSQ-THGIVMGGVKRNVEAEALKKGVNLLVSTPGRLL 139
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E D+ + +++L K++ Q++L SAT T
Sbjct: 140 DHLQNTKGFLFKNLQCLVIDEADRILEIGFEEDMKQIIKLLPKER---QTVLFSATQT 194
>gi|350629917|gb|EHA18290.1| hypothetical protein ASPNIDRAFT_38107 [Aspergillus niger ATCC 1015]
Length = 802
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 247/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ IPI++ L R + S DG+ A+++ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENL--YRKQWSEHDGLGALVLSP 127
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 186 TSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQTKKVSDLA 242
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H S P L+QH++VTP +L L SFI +
Sbjct: 243 RLSLQDP------EYVAVHEAASS-ATPSKLQQHYVVTPLPQKLDVLWSFIRSNLK---- 291
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E + + LHG Q R ++ F S + VL
Sbjct: 292 ---SKTIVFLSSGKQVRFVYESFRH-MQPGVPLMHLHGRQKQGGRLDITTKFSSAQHAVL 347
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE K +++
Sbjct: 348 FATDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEKGMLK 407
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++++E I +K Q + +++ M F+ L K L
Sbjct: 408 RLEQKKVQVERINVKANKQQSIKDQLQ------------------NMCFKDPEL--KYLG 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A Y V Y + + IFN K++ L FA S L AP +
Sbjct: 448 QKAFISYAKSV-----YVQKDKEIFNIKELKLDEFAGSLGLPGAPRI 489
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ IPI++ L R + S DG+ A+++ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENL--YRKQWSEHDGLGALVLSP 127
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 186 TSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQT 235
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 197 LVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQTKKVSDLARLSLQDP---- 249
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +H S P L+QH++VTP +L L SFI + SK +VF++
Sbjct: 250 --EYVAVHEAASS-ATPSKLQQHYVVTPLPQKLDVLWSFIRSNLK-------SKTIVFLS 299
Query: 318 T 318
+
Sbjct: 300 S 300
>gi|145240499|ref|XP_001392896.1| ATP-dependent RNA helicase dbp4 [Aspergillus niger CBS 513.88]
gi|134034071|sp|A2QS00.1|DBP4_ASPNC RecName: Full=ATP-dependent RNA helicase dbp4
gi|134077418|emb|CAK45672.1| unnamed protein product [Aspergillus niger]
Length = 802
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 247/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ IPI++ L R + S DG+ A+++ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENL--YRKQWSEHDGLGALVLSP 127
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 186 TSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQTKKVSDLA 242
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H S P L+QH++VTP +L L SFI +
Sbjct: 243 RLSLQDP------EYVAVHEAASS-ATPSKLQQHYVVTPLPQKLDVLWSFIRSNLK---- 291
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E + + LHG Q R ++ F S + VL
Sbjct: 292 ---SKTIVFLSSGKQVRFVYESFRH-MQPGVPLMHLHGRQKQGGRLDITTKFSSAQHAVL 347
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE K +++
Sbjct: 348 FATDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEKGMLK 407
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++++E I +K Q + +++ M F+ L K L
Sbjct: 408 RLEQKKVQVERINVKANKQQSIKDQLQ------------------NMCFKDPEL--KYLG 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A Y V Y + + IFN K++ L FA S L AP +
Sbjct: 448 QKAFISYAKSV-----YVQKDKEIFNIKELKLDEFAGSLGLPGAPRI 489
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ IPI++ L R + S DG+ A+++ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENL--YRKQWSEHDGLGALVLSP 127
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 186 TSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQT 235
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 197 LVLDEADRILDMGFQKTVDAIIGHLPKER---QTLLFSATQTKKVSDLARLSLQDP---- 249
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +H S P L+QH++VTP +L L SFI + SK +VF++
Sbjct: 250 --EYVAVHEAASS-ATPSKLQQHYVVTPLPQKLDVLWSFIRSNLK-------SKTIVFLS 299
Query: 318 T 318
+
Sbjct: 300 S 300
>gi|384251134|gb|EIE24612.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 502
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 255/473 (53%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T VQ +I +L G DVL ++TGSGKTLA+ +P ++ L + K ++G A
Sbjct: 22 MGFTHMTEVQARTIPHLLTGRDVLGAAKTGSGKTLAFLVPCLELLH--KAKFMPRNGTGA 79
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELA+Q + L + + + GG ++E ++ KG++++VATPGRLL
Sbjct: 80 LIISPTRELAMQIYSVARDLLQHHSQ-THGLIMGGANRRTEAEKLVKGVNLIVATPGRLL 138
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ +S + LV+DEADRIL+ G+E ++ + + IL K + Q++L SAT T
Sbjct: 139 DHLQNTKGFVYSNLACLVIDEADRILEIGFEEEMRQIVRILPKDR---QTMLFSATQTTK 195
Query: 590 VQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++ + P+ + D + + L+Q + + P + RL+ L +
Sbjct: 196 VEDLARLSFKRQPLYVGVDDKQEA-------ATREGLEQGYCIVPSEQRLLLLFT----- 243
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ ++++ K++VF ++ + YH ELL+ + ++ +HG Q RT F F
Sbjct: 244 --FLKKNKDKKVMVFFSSCNSVKYHGELLNYI---DVPVKDIHGKQKQQRRTTTFLEFCK 298
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G +LL L+P
Sbjct: 299 AEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGRSGRGRALLMLLPQ 358
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ ++ L+ ++ + E + S+LA+ +Q E V
Sbjct: 359 EIGFLKYLKEAKVPLNEYEFPQ--------------SKLAN---------VQSQLEKLVE 395
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LHTSA Y S++ Y S+ L+ FN + L AKSF P V
Sbjct: 396 KNFYLHTSARDAYRSYLLAYNSHQ--LKSTFNVHTLDLLSVAKSFGFAQPPRV 446
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I +L G DVL ++TGSGKTLA+ +P ++ L + K ++G A
Sbjct: 22 MGFTHMTEVQARTIPHLLTGRDVLGAAKTGSGKTLAFLVPCLELLH--KAKFMPRNGTGA 79
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA+Q + L + + + GG ++E ++ KG++++VATPGRLL
Sbjct: 80 LIISPTRELAMQIYSVARDLLQHHSQ-THGLIMGGANRRTEAEKLVKGVNLIVATPGRLL 138
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ +S + LV+DEADRIL+ G+E ++ + + IL K + Q++L SAT T
Sbjct: 139 DHLQNTKGFVYSNLACLVIDEADRILEIGFEEEMRQIVRILPKDR---QTMLFSATQT 193
>gi|302789171|ref|XP_002976354.1| hypothetical protein SELMODRAFT_104808 [Selaginella moellendorffii]
gi|300155984|gb|EFJ22614.1| hypothetical protein SELMODRAFT_104808 [Selaginella moellendorffii]
Length = 489
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 249/479 (51%), Gaps = 50/479 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
KN + T +T +Q SI +L G DVL ++TGSGKTLA+ +P ++ L R
Sbjct: 13 KNAIAEIGFTNMTEIQSRSIPELLKGRDVLGAARTGSGKTLAFLVPAVELLYHAR--FMP 70
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTRELA+Q + KL K + + GG K E ++KG+++LV+
Sbjct: 71 RNGTGVLIISPTRELAMQIYGVARKLMKHHSQ-THGIVMGGVKRNVEAEALKKGVNLLVS 129
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E D+ + +++L K++ Q++L S
Sbjct: 130 TPGRLLDHLQNTKGFLFKNLQCLVIDEADRILEIGFEEDMKQIIKLLPKER---QTVLFS 186
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V+ LA ++ + PI I D S + L+Q + V R + L
Sbjct: 187 ATQTTKVEDLAKLSFKKAPIYIGVDDER-------SKATVEGLEQGYCVVKTDKRFLLLF 239
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ + +H ELL+ + +I +HG Q +RT
Sbjct: 240 TFL-------KKNLKKKVMVFFSSCNSVKFHGELLNFI---DIPCLDIHGKQKQQKRTNT 289
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSL 761
+ F + + G+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G +L
Sbjct: 290 YFEFCNAEKGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTARGESGRGRAL 349
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
LFL P E+ L ++ + E E +Q
Sbjct: 350 LFLTPEELGFKRYLTMAKVPLNEYMFP-----------------------ENKIANVQSQ 386
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E+ + + LH SA Y S++ Y S++ ++ FN ++ L A SF P +
Sbjct: 387 LENLIGKNYNLHRSARDAYRSYIMAYNSHA--MKDAFNVHRLDLQAVAASFGFSCPPKI 443
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T +Q SI +L G DVL ++TGSGKTLA+ +P ++ L R ++G
Sbjct: 19 IGFTNMTEIQSRSIPELLKGRDVLGAARTGSGKTLAFLVPAVELLYHAR--FMPRNGTGV 76
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA+Q + KL K + + GG K E ++KG+++LV+TPGRLL
Sbjct: 77 LIISPTRELAMQIYGVARKLMKHHSQ-THGIVMGGVKRNVEAEALKKGVNLLVSTPGRLL 135
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E D+ + +++L K++ Q++L SAT T
Sbjct: 136 DHLQNTKGFLFKNLQCLVIDEADRILEIGFEEDMKQIIKLLPKER---QTVLFSATQT 190
>gi|196006533|ref|XP_002113133.1| hypothetical protein TRIADDRAFT_56998 [Trichoplax adhaerens]
gi|190585174|gb|EDV25243.1| hypothetical protein TRIADDRAFT_56998 [Trichoplax adhaerens]
Length = 533
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 225/380 (59%), Gaps = 25/380 (6%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M+ T +T +Q +I +L G DVL ++TGSGKTLA+ IP ++ L ++ + G
Sbjct: 115 MSFTNMTQIQHKTIPHLLMGRDVLGAARTGSGKTLAFLIPAVELLHKL--NFMPRTGTGI 172
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL+LQT + L K + + GG K+E +++KG+++L+ATPGRLL
Sbjct: 173 IIISPTRELSLQTYGVARDLLKYHRYTF-GLIMGGANRKTEAEKLQKGVNLLIATPGRLL 231
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T ++ L++DEADRIL G+E ++ + + +L ++ Q+++ SAT T
Sbjct: 232 DHLQNTNGFVSKNLQCLIIDEADRILQIGFEDEMKQIVRLLPSRR---QTVMFSATQTRN 288
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ +P+ I D D+ D L+Q ++V P R + L +F+
Sbjct: 289 VEDLARISLKKSPLYIGVDDDRDVATV-------DGLEQGYVVCPSDRRFLLLFTFL--- 338
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ K++VF ++ + +H+ELL+ V ++A +HG Q +RT F F +
Sbjct: 339 ----KKNRNKKVMVFFSSCNSVKFHSELLNYV---DLAVTDIHGRQKQQKRTATFFDFCN 391
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G +LLFL+P
Sbjct: 392 AKEGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGENSRGHALLFLMPE 451
Query: 768 EVKLVEELQNRRIRIEEIKL 787
E+ + L++ ++ + E +
Sbjct: 452 ELAFLRYLKHAKVPLSEYEF 471
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 80/330 (24%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M+ T +T +Q +I +L G DVL ++TGSGKTLA+ IP ++ L ++ + G
Sbjct: 115 MSFTNMTQIQHKTIPHLLMGRDVLGAARTGSGKTLAFLIPAVELLHKL--NFMPRTGTGI 172
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL+LQT + L K + + GG K+E +++KG+++L+ATPGRLL
Sbjct: 173 IIISPTRELSLQTYGVARDLLKYHRYTF-GLIMGGANRKTEAEKLQKGVNLLIATPGRLL 231
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T ++ L++DEADRIL G+E ++ + + +L ++ Q+++ SAT T
Sbjct: 232 DHLQNTNGFVSKNLQCLIIDEADRILQIGFEDEMKQIVRLLPSRR---QTVMFSATQT-- 286
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
R++ + I K+ P +
Sbjct: 287 --------------------------------RNVEDLARISLKKSPLY----------- 303
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
I D D+ T D L +Q ++V P R + L +F+
Sbjct: 304 ---------------IGVDDDRDVA-TVDGL------EQGYVVCPSDRRFLLLFTFL--- 338
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
++ K++VF ++ + +H+ELL+
Sbjct: 339 ----KKNRNKKVMVFFSSCNSVKFHSELLN 364
>gi|340504344|gb|EGR30794.1| hypothetical protein IMG5_123370 [Ichthyophthirius multifiliis]
Length = 814
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 256/475 (53%), Gaps = 48/475 (10%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDGIYAVI 471
++T +Q+ +I +L G D++ S+TGSGKTL+Y IPI+++L Q+ P DG+ A+I
Sbjct: 98 KMTEIQRCTIPHLLAGRDLVGASKTGSGKTLSYIIPILERLYLQKWNPY----DGLGAII 153
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
ILPTRELA Q E++ + ++ V + GG+ +K EK I KG+++L+ TPGRLL H
Sbjct: 154 ILPTRELATQVFEVYNSISENHILSV-GLIIGGKNLKYEKDNI-KGMNVLICTPGRLLQH 211
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
T S V+ LV+DEAD IL+ G++ + + L L+ K + Q+IL SATL+ ++
Sbjct: 212 MDETADFDCSNVQILVIDEADMILELGFQESLNQILFNLQNSKNK-QTILFSATLSKSIH 270
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTT----DSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
++ +LQNP + D N D P L Q ++ P + ++ L SF+
Sbjct: 271 EISKFSLQNPEHVFLHDVRAAQNQNTDLKDIFEAPIKLNQFYMECPAEQKINILFSFLKS 330
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTV-LGENIAFFKLHGSMSQSERTEVFKTF 706
+N K+ +FM+T + E + + LG + F+LHG QS+R +F TF
Sbjct: 331 HKKN-------KICIFMSTCKQVRFIYESMRKMHLGPPV--FELHGRQKQSKRMAIFFTF 381
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
K VL T++AARGLD P VDWI+Q+ P Y+HRVGRTAR G+SLL +P
Sbjct: 382 AEKKYAVLFTTNIAARGLDFPCVDWIIQFDCPEDQVTYMHRVGRTARYKSGGNSLLLALP 441
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
SE+K VE L+ + +I++ LSV + +S + +S +
Sbjct: 442 SEMKFVERLKEKGQQIKK----------LSVNPDKQIS-------------FTNTLQSYL 478
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
++ L A + + S++R + Y + +F+ +I A+SF L AP +I
Sbjct: 479 VENIQLKYLAQRAFVSYMR--SVYLAQDKKVFDISKIDGKLLAESFGLIQAPVII 531
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 130/218 (59%), Gaps = 17/218 (7%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDGIYAVI 62
++T +Q+ +I +L G D++ S+TGSGKTL+Y IPI+++L Q+ P DG+ A+I
Sbjct: 98 KMTEIQRCTIPHLLAGRDLVGASKTGSGKTLSYIIPILERLYLQKWNPY----DGLGAII 153
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
ILPTRELA Q E++ + ++ V + GG+ +K EK I KG+++L+ TPGRLL H
Sbjct: 154 ILPTRELATQVFEVYNSISENHILSV-GLIIGGKNLKYEKDNI-KGMNVLICTPGRLLQH 211
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
T S V+ LV+DEAD IL+ G++ + + L L+ K + Q+IL SATL+ +
Sbjct: 212 MDETADFDCSNVQILVIDEADMILELGFQESLNQILFNLQNSKNK-QTILFSATLSKSI- 269
Query: 183 WCKHTETLKFS--KVEHLVLDEADRILDQGYE-RDIAE 217
E KFS EH+ L + +Q + +DI E
Sbjct: 270 ----HEISKFSLQNPEHVFLHDVRAAQNQNTDLKDIFE 303
>gi|73994422|ref|XP_543371.2| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 1 [Canis lupus
familiaris]
Length = 599
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 266/498 (53%), Gaps = 50/498 (10%)
Query: 391 SYEEFPG-IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L + + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPTQLHPQVLGALGQ-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K+ + A+II PTRELA+Q E+ KSF GG
Sbjct: 67 ILEILLRREEKL-KKNQVGAIIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPAD 125
Query: 510 EKARIR-KGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ +R + +G +I+VATPGRL D + E L + +E LVLDEADR+LD G+E I
Sbjct: 126 DVSRFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K L+F +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLIFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
++ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PSS++
Sbjct: 293 SVKIMCIHGKM-KHKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E V L+ N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYVTFLEINQKCPLQEMKLQKNTGDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSV 880
+ A+ FAL P +
Sbjct: 446 LDFASLARGFALLRMPKM 463
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ KSF GG + +R + +G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKEQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + KVE L L
Sbjct: 146 EDMFRR-------KVEGLDL---------------------------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C +E LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLEVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ +++V + L F+
Sbjct: 207 QEVESLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K L+F +T +Y+ + L
Sbjct: 263 -----RNHKQEKHLIFFSTCACVEYYGKAL 287
>gi|149236686|ref|XP_001524220.1| hypothetical protein LELG_04190 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013482|sp|A5E3K3.1|DBP4_LODEL RecName: Full=ATP-dependent RNA helicase DBP4
gi|146451755|gb|EDK46011.1| hypothetical protein LELG_04190 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 775
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 258/495 (52%), Gaps = 58/495 (11%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ SI L G D++ ++TGSGKTLA+ IP+I+ L +R I+ DG+ A+I+ P
Sbjct: 71 LTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIPVIEIL--LRNDITEYDGLAALIVSP 128
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ K + +TGG+ ++ EK RI + ++ILV TPGR+ H
Sbjct: 129 TRELAVQIFEVLAKIGK-YNSFSAGLVTGGKDVQYEKERISR-MNILVGTPGRISQHLNE 186
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
+ ++ S ++ LVLDEADR LD G+ + I L L + + Q++L SAT T +VQ LA
Sbjct: 187 SVGMETSNLQVLVLDEADRCLDMGFRKQIDNILNHLPRTR---QTLLFSATHTDSVQDLA 243
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L NP +I + DI IP+SL Q+++ P +L L SFI +
Sbjct: 244 RLSLTNPKRIGTSSDQDIS------AIPESLDQYYVKVPLNEKLDVLWSFIKSHLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK+LVF ++ Y E T L I KL+G Q+ R E F + L
Sbjct: 294 ---SKILVFFSSSKQVQYAYETFRT-LQPGIPLMKLYGRHKQTSRLETTVKFSQAQHACL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
TD+ ARGLD P +DW++Q P YVHRVGR+AR G +G SLL L+P+E E+
Sbjct: 350 FATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQGKSLLMLLPTE----ED 405
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
+R+++ +I+ K ++++K E + +++ +S + ++
Sbjct: 406 GMLKRMKVHKIEPK-----MMNIK-------------EKSKKSIRPQLQSLCFKDPVIKN 447
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK 894
+ + ++ F + Y + + IF ++ + +A S L AP + K
Sbjct: 448 LGQRAFIAY--FRSVYIQKDKDIFKVDELPVEEYAASLGLPGAPKI-------------K 492
Query: 895 NKKMAINKEKSFKQR 909
K INKEK + R
Sbjct: 493 IKGGEINKEKKNQSR 507
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ SI L G D++ ++TGSGKTLA+ IP+I+ L +R I+ DG+ A+I+ P
Sbjct: 71 LTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIPVIEIL--LRNDITEYDGLAALIVSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ K + +TGG+ ++ EK RI + ++ILV TPGR+ H
Sbjct: 129 TRELAVQIFEVLAKIGK-YNSFSAGLVTGGKDVQYEKERISR-MNILVGTPGRISQHLNE 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ ++ S ++ LVLDEADR LD G+ + I L L + + Q++L SAT T
Sbjct: 187 SVGMETSNLQVLVLDEADRCLDMGFRKQIDNILNHLPRTR---QTLLFSATHT 236
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+ + I L L + + Q++L SAT T +VQ LA ++
Sbjct: 190 METSNLQVLVLDEADRCLDMGFRKQIDNILNHLPRTR---QTLLFSATHTDSVQDLARLS 246
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + DI IP+SL Q+++ P +L L SFI +
Sbjct: 247 LTNPKRIGTSSDQDIS------AIPESLDQYYVKVPLNEKLDVLWSFIKSHLK------- 293
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 294 SKILVFFSSSKQVQYAYETFRT 315
>gi|407918962|gb|EKG12222.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 523
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 220/379 (58%), Gaps = 22/379 (5%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T VQ+ +I P+L G DVL ++TGSGKTLA+ IP+++ L +R K ++G A
Sbjct: 127 MGFTTMTEVQKKAIPPLLAGRDVLGAAKTGSGKTLAFLIPVVEMLHSLRFK--PRNGTGA 184
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + T + GG K+E+ ++ KG+++L+ATPGRLL
Sbjct: 185 IVISPTRELALQIFGVARELMEHHTQTF-GIVMGGANRKAEQIKLEKGVNLLIATPGRLL 243
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F + LVLDEADRIL+ G+E ++ ++IL Q Q+ L SAT T
Sbjct: 244 DHLQNTPGFVFKNLRTLVLDEADRILEVGFEDELKAIVKILGNPD-QRQTALFSATQTTK 302
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I + D H+T DSL + ++V LR L +F+
Sbjct: 303 VEDLARISLKPGPLFI-SVDHYKEHSTADSLEL------GYVVCESDLRFRLLFTFL--- 352
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ ++ K++VF ++ +Y T LL+ + ++ L G M Q +RT F F +
Sbjct: 353 ----KKHQKKKIIVFTSSCASVEYLTSLLNYI---DLPVLGLSGKMKQQKRTATFFEFAN 405
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+ GVLI TDVAARGLD+P VDW++Q P + ++HR GRT R G G LL L PSE
Sbjct: 406 SQHGVLIATDVAARGLDIPAVDWVIQLDPPDDARSFIHRAGRTGRAGKSGRCLLVLQPSE 465
Query: 769 VKLVEELQNRRIRIEEIKL 787
V LQ R+ I E +
Sbjct: 466 VAFTRHLQEARVPIVEFEF 484
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 4/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ+ +I P+L G DVL ++TGSGKTLA+ IP+++ L +R K ++G A
Sbjct: 127 MGFTTMTEVQKKAIPPLLAGRDVLGAAKTGSGKTLAFLIPVVEMLHSLRFK--PRNGTGA 184
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + T + GG K+E+ ++ KG+++L+ATPGRLL
Sbjct: 185 IVISPTRELALQIFGVARELMEHHTQTF-GIVMGGANRKAEQIKLEKGVNLLIATPGRLL 243
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F + LVLDEADRIL+ G+E ++ ++IL Q Q+ L SAT T
Sbjct: 244 DHLQNTPGFVFKNLRTLVLDEADRILEVGFEDELKAIVKILGNPD-QRQTALFSATQT 300
>gi|385304329|gb|EIF48351.1| atp-dependent rna helicase [Dekkera bruxellensis AWRI1499]
Length = 442
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 254/473 (53%), Gaps = 48/473 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ +I +L G DVL ++TGSGKTLA+ IP I+ L + K ++G A++I P
Sbjct: 1 MTEVQAKTIPVLLTGKDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGAIVITP 58
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELALQ + +L + + + GG + E ++ KG+++L+ATPGRLLDH ++
Sbjct: 59 TRELALQIFGVARELMAHHSQTL-GIVIGGANRRQEAEKLAKGVNLLIATPGRLLDHLQN 117
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T F + L+ DEADRIL+ G+E +I + ++IL + Q ++L SAT T V+ LA
Sbjct: 118 TRGFVFKNLRTLIFDEADRILEIGFEDEIRQIVKILPNEDRQ--TMLFSATQTTKVEDLA 175
Query: 595 GMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
L+ P+ I+ ++ + + L+Q ++V R + L SF+ +N+
Sbjct: 176 RAALKKAPVYINVSERKEAATVS-------GLEQGYVVCESDQRFLLLFSFL---KRNM- 224
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
+ K++VF ++ + Y ELL+ + +I LHG Q +RT F F + K G+
Sbjct: 225 --RKKKIIVFFSSCNCVKYFAELLNYI---DIPALSLHGKQKQQKRTNTFFEFCNAKRGI 279
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLV 772
L+ TDVAARGLD+P VDWI+QY P DY+HRVGRTAR +G SL+FLIP E+ +
Sbjct: 280 LLSTDVAARGLDIPDVDWIIQYDPPDDPRDYIHRVGRTARGTKGKGKSLMFLIPQELGFL 339
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
L+ ++ + E + S++A+ +Q E + L
Sbjct: 340 RYLKAAKVPLNEYEFPP--------------SKIAN---------IQSQLEKLIKNNYWL 376
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
H +A GY ++++ YAS+ L+ ++ ++ L +SF P V IG
Sbjct: 377 HQAAKDGYRAYLQAYASHH--LKTVYKVDKLDLVKVGRSFGFSVPPKVNITIG 427
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 107/173 (61%), Gaps = 5/173 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I +L G DVL ++TGSGKTLA+ IP I+ L + K ++G A++I P
Sbjct: 1 MTEVQAKTIPVLLTGKDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGAIVITP 58
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELALQ + +L + + + GG + E ++ KG+++L+ATPGRLLDH ++
Sbjct: 59 TRELALQIFGVARELMAHHSQTL-GIVIGGANRRQEAEKLAKGVNLLIATPGRLLDHLQN 117
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T F + L+ DEADRIL+ G+E +I + ++IL + Q++L SAT T
Sbjct: 118 TRGFVFKNLRTLIFDEADRILEIGFEDEIRQIVKILPNEDR--QTMLFSATQT 168
>gi|296478480|tpg|DAA20595.1| TPA: ATP-dependent RNA helicase DDX55 [Bos taurus]
Length = 601
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 261/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLSVLRE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 IVEILLRREEKF-KKSQVGAIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ AR ++ G +I+VATPGRL D + E L + +E LVLDEADR+LD G+E I
Sbjct: 126 DVARFKELGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ H++V + L F+ ++ K LVF +T +Y+ + L T++ +
Sbjct: 241 RLENHYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALETLV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYISFLAINQKCPLQEMKLQKNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
++ L + + K + S+V+ YA + +L IF K
Sbjct: 406 ------------------KLKAMALGDRAVFEKGMKAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 142/327 (43%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K +K + A+II P
Sbjct: 32 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIVEILLRREEKF-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + AR ++ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L A+C
Sbjct: 151 R-------KAEGLDL----------------------------------------ASC-- 161
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+E LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 162 -------VRSLEVLVLDEADRLLDMGFETSINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP++I + ++T P L+ H++V + L F+
Sbjct: 212 LVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
++ K LVF +T +Y+ + L T
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKALET 289
>gi|67516615|ref|XP_658193.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
gi|74627495|sp|Q5BFU1.1|DBP4_EMENI RecName: Full=ATP-dependent RNA helicase dbp4
gi|40747532|gb|EAA66688.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
gi|259489143|tpe|CBF89171.1| TPA: ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFU1] [Aspergillus
nidulans FGSC A4]
Length = 812
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 246/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G DVL ++TGSGKTLA+ +PI++ L R + S DG+ A+II P
Sbjct: 71 LTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENL--YRKQWSDHDGLGALIISP 128
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 186
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G+++ + + L P+ Q++L SAT T V LA
Sbjct: 187 TAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLP---PERQTLLFSATQTKKVSDLA 243
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H S P L+QH++VTP +L L SFI +
Sbjct: 244 RLSLQDP------EYVAVHEAASS-ATPSKLQQHYVVTPLPQKLDTLWSFIRSNLK---- 292
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VFM++ + E + I LHG Q R ++ F + VL
Sbjct: 293 ---SKTIVFMSSGKQVRFVYESFRH-MQPGIPLLHLHGRQKQGGRLDITTRFSQAQHAVL 348
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE K ++
Sbjct: 349 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEKGMLR 408
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +R+ +E I ++ Q + +++ M F+ L K L
Sbjct: 409 RLEQKRVTVERINVRANKQQSIKNQLQ------------------NMCFKDPEL--KYL- 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + Y + + FN K++ L FA S L AP +
Sbjct: 448 --GQKAFISYVK--SVYIQKDKETFNLKELKLDDFAASLGLPGAPRI 490
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G DVL ++TGSGKTLA+ +PI++ L R + S DG+ A+II P
Sbjct: 71 LTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENL--YRKQWSDHDGLGALIISP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRI+D G+++ + + L P+ Q++L SAT T
Sbjct: 187 TAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHL---PPERQTLLFSATQT 236
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRI+D G+++ + + L P+ Q++L SAT T V LA ++LQ+P
Sbjct: 198 LVLDEADRIMDMGFQKTVDAIIGHL---PPERQTLLFSATQTKKVSDLARLSLQDP---- 250
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +H S P L+QH++VTP +L L SFI + SK +VFM+
Sbjct: 251 --EYVAVHEAASS-ATPSKLQQHYVVTPLPQKLDTLWSFIRSNLK-------SKTIVFMS 300
Query: 318 T 318
+
Sbjct: 301 S 301
>gi|315045866|ref|XP_003172308.1| ATP-dependent RNA helicase DBP4 [Arthroderma gypseum CBS 118893]
gi|311342694|gb|EFR01897.1| ATP-dependent RNA helicase DBP4 [Arthroderma gypseum CBS 118893]
Length = 818
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 251/471 (53%), Gaps = 48/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGAM 126
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRHHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKV 241
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++LQ+P I +H S P +L+QH++VTP +L L SFI +
Sbjct: 242 SDLARLSLQDPEYIS------VHEAASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSVK 294
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF ++ + E + I LHG Q R ++ F + K
Sbjct: 295 -------SKIIVFFSSSKEVRFVYEAFRQ-MQPGIPLLHLHGRQKQGARLDITHKFSASK 346
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EV 769
+ L TDV ARGLD P VDW++Q P S Y+HRVGRTAR +G ++LFL PS E+
Sbjct: 347 NSCLFATDVVARGLDFPAVDWVIQLDCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEI 406
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++ L+ ++I IE+I ++ Q + +++ M F+ L
Sbjct: 407 GMLSRLEQKKIPIEKINIRANKQQSIKHQLQ------------------NMCFKDPQL-- 446
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K L K +TS+V+ + Y + + +F+ K + L FA S L AP +
Sbjct: 447 KYL---GQKAFTSYVK--SIYIQKDKEVFDVKALPLEEFAASLGLPGAPRI 492
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 151/317 (47%), Gaps = 82/317 (25%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGAM 126
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRHHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSA------ 235
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
T+T K S + L L Q P++ SV +A
Sbjct: 236 -----TQTKKVSDLARLSL------------------------QDPEYISVHEAA----- 261
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
S P +L+QH++VTP +L L SFI
Sbjct: 262 ----------------------------SSATPSTLQQHYVVTPLPDKLDTLWSFIRSSV 293
Query: 302 QNVNEDEESKMLVFMAT 318
+ SK++VF ++
Sbjct: 294 K-------SKIIVFFSS 303
>gi|320581342|gb|EFW95563.1| Putative nucleolar DEAD box RNA helicase [Ogataea parapolymorpha
DL-1]
Length = 742
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 270/511 (52%), Gaps = 51/511 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ SI L G D+L ++TGSGKTLA+ IP+I+KL + + DG+ A+II P
Sbjct: 66 MTDIQRDSIPLALKGHDILGAAKTGSGKTLAFLIPVIEKL--VHENWNEFDGVGALIISP 123
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ K ++ + GG+ + EK RI K ++IL+ TPGRLL H
Sbjct: 124 TRELAMQIYEVLLKIGKHHSFSA-GLVIGGKDYEFEKERIGK-MNILIGTPGRLLQHMDQ 181
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
+ TL + ++ LVLDEADRILD G+++ + + + L P+ QS+L SAT T +VQ LA
Sbjct: 182 SATLNLTNLQILVLDEADRILDLGFKKTLDDIISNLP---PERQSLLFSATQTKSVQDLA 238
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L NP ++A ++D+ P+SL+Q ++V + +L L SFI
Sbjct: 239 RLSLVNPEYVNA--------SSDTSSTPESLEQSYVVIRLQDKLDILWSFIKSHL----- 285
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+SK+LVF+++ + E L I+ KLHG Q R E F + L
Sbjct: 286 --DSKILVFVSSSKQVHFIYEAFRK-LQPGISLMKLHGRQKQKARMETTFKFTESRHCCL 342
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARGLD P +DW+VQ P Y+HRVGR+AR G G SLL L PSE + V+
Sbjct: 343 FATDVVARGLDFPAIDWVVQLDCPEDVATYIHRVGRSARAGRAGKSLLMLTPSEEEPFVK 402
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L++++I +++ +++ + +++ +S + L
Sbjct: 403 RLESKKIAPKKLNIRN-----------------------SKKKSIRDQIQSLCFKSPDLK 439
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV--ISGIGKPKNKE 891
K + S+V+ + Y + + +F+ KQ+ L FAKS L P + ++G + ++
Sbjct: 440 YLGQKAFISYVK--SVYIQKDKEVFDVKQLPLDEFAKSLGLPGTPKIKMVAGDEELAKQK 497
Query: 892 ELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ KN ++ + G K+ +++D
Sbjct: 498 QKKNASRQLSLLAKADENGEVEAKKTRTKYD 528
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ SI L G D+L ++TGSGKTLA+ IP+I+KL + + DG+ A+II P
Sbjct: 66 MTDIQRDSIPLALKGHDILGAAKTGSGKTLAFLIPVIEKL--VHENWNEFDGVGALIISP 123
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ K ++ + GG+ + EK RI K ++IL+ TPGRLL H
Sbjct: 124 TRELAMQIYEVLLKIGKHHSFSA-GLVIGGKDYEFEKERIGK-MNILIGTPGRLLQHMDQ 181
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ TL + ++ LVLDEADRILD G+++ + + + L P+ QS+L SAT T
Sbjct: 182 SATLNLTNLQILVLDEADRILDLGFKKTLDDIISNL---PPERQSLLFSATQT 231
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 18/130 (13%)
Query: 189 TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGM 248
TL + ++ LVLDEADRILD G+++ + + + L P+ QS+L SAT T +VQ LA +
Sbjct: 184 TLNLTNLQILVLDEADRILDLGFKKTLDDIISNLP---PERQSLLFSATQTKSVQDLARL 240
Query: 249 TLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 308
+L NP ++A ++D+ P+SL+Q ++V + +L L SFI
Sbjct: 241 SLVNPEYVNA--------SSDTSSTPESLEQSYVVIRLQDKLDILWSFIKSHL------- 285
Query: 309 ESKMLVFMAT 318
+SK+LVF+++
Sbjct: 286 DSKILVFVSS 295
>gi|323308222|gb|EGA61471.1| Dbp7p [Saccharomyces cerevisiae FostersO]
Length = 658
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 245/471 (52%), Gaps = 70/471 (14%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVXSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGE 571
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>gi|261332680|emb|CBH15675.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 604
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 254/495 (51%), Gaps = 49/495 (9%)
Query: 387 FAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
+ P S ++P + L ++T +Q I L G D+L ++TGSGKTLA+
Sbjct: 105 YPPVSDYRSLKLNPHIVTALENDFKFQELTGIQGRCIPAALAGRDLLAEAKTGSGKTLAF 164
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT--GG 504
IPI++ + R ++ G A+II PTREL LQ + KL K F V ++L GG
Sbjct: 165 LIPIVEII--TRVGFRQRSGTAAIIIGPTRELCLQIEGVLLKLLKHFNGSV-TFLCCIGG 221
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
K E ++ G+ +++ATPGRLLDH K T + L +DEADR+LD G+E D+
Sbjct: 222 ISRKQEAFKLVSGMMVVMATPGRLLDHLKLTTDWLTKNLLVLAVDEADRVLDNGFEDDMR 281
Query: 565 EFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDS 624
E + +L +Q+ Q+ L SAT T V++LA ++ P + + T D+L
Sbjct: 282 EIVSLLPRQR---QTFLFSATQTTRVEQLARVSFYRPPLFISMKRKEDKATVDTL----- 333
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGEN 684
+Q +++ P + RL+ L F V + + K++VF ++++ +H EL + +
Sbjct: 334 -EQGYVICPSQQRLLVLYHF-------VRRNLKKKVIVFFSSRNAVSFHCELFNYIDVPC 385
Query: 685 IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDY 744
+AF HG Q +R+ + F + SGVL TDVAARGLD+P VDWIVQ+ P Y
Sbjct: 386 VAF---HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPQVDWIVQFDPPDDPVKY 442
Query: 745 VHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDL 803
VHRVGRTAR G G++L+FL+P E ++ L + + + E DL
Sbjct: 443 VHRVGRTARAGRRGNALMFLLPQEKLFLKYLHDDAHVSVSEYTF--------------DL 488
Query: 804 SRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQI 863
+++ GNV E V L +SA Y ++ Y+ S L+++F+ +
Sbjct: 489 NKVK-GNVAE-------QLEQLVSANYYLRSSARLAYEGYLLSYS--SSQLKNVFDIHNL 538
Query: 864 HLGHFAKSFALRDAP 878
L AK FAL + P
Sbjct: 539 DLAAVAKGFALSEPP 553
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q I L G D+L ++TGSGKTLA+ IPI++ + R ++ G A+II
Sbjct: 132 ELTGIQGRCIPAALAGRDLLAEAKTGSGKTLAFLIPIVEII--TRVGFRQRSGTAAIIIG 189
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLT--GGEKMKSEKARIRKGISILVATPGRLLDH 122
PTREL LQ + KL K F V ++L GG K E ++ G+ +++ATPGRLLDH
Sbjct: 190 PTRELCLQIEGVLLKLLKHFNGSV-TFLCCIGGISRKQEAFKLVSGMMVVMATPGRLLDH 248
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L +Q+ Q+ L SAT T
Sbjct: 249 LKLTTDWLTKNLLVLAVDEADRVLDNGFEDDMREIVSLLPRQR---QTFLFSATQT 301
>gi|294655023|ref|XP_457109.2| DEHA2B03322p [Debaryomyces hansenii CBS767]
gi|218512020|sp|Q6BXG0.2|DBP4_DEBHA RecName: Full=ATP-dependent RNA helicase DBP4
gi|199429633|emb|CAG85100.2| DEHA2B03322p [Debaryomyces hansenii CBS767]
Length = 766
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/490 (33%), Positives = 257/490 (52%), Gaps = 48/490 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ +I L G DV+ ++TGSGKTLA+ IP I+ L +R KI+ DG+ A+II P
Sbjct: 69 LTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPTIESL--IRNKITEYDGLAALIISP 126
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ K + +TGG+ +K EK R+ K ++ILV TPGR+ H
Sbjct: 127 TRELAVQIFEVLVKIGKHNNFSA-GLVTGGKDVKYEKERVSK-MNILVGTPGRISQHLNE 184
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
+ ++ S ++ LVLDEADR LD G+++ I L L P Q++L SAT + +V+ LA
Sbjct: 185 SVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLP---PTRQTLLFSATQSDSVKDLA 241
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L NP ++ + ++ T P+SL+Q++I P +L L SFI +
Sbjct: 242 RLSLANPKRVGISSDQELSAT------PESLEQYYIKIPLDEKLDVLWSFIKSHLK---- 291
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK+LVF ++ Y E T L I+ KL+G Q+ R E F + L
Sbjct: 292 ---SKILVFFSSSKQVQYAYETFRT-LQPGISLLKLYGRHKQTSRMETTMKFSQAQHACL 347
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TD+ ARGLD P +DW+VQ P + YVHRVGR AR G G SL+ L+PSE +++
Sbjct: 348 FATDIVARGLDFPAIDWVVQIDCPEDAATYVHRVGRAARFGRAGKSLMMLLPSEENGMLK 407
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L N +I ++ +++K + N +T LQ S Q ++
Sbjct: 408 RLNNNKIELK----------FMNIKQK---------NKKTIRPQLQ----SLCFQDPMIK 444
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKEE 892
+ + S+ F + Y + + IF ++ FA+S L AP + G K K+
Sbjct: 445 NLGQRAFISY--FRSVYVQKDKDIFKIDELPSDKFARSLGLPGAPKIKFKGGSDNKEKKN 502
Query: 893 LKNKKMAINK 902
+ + A++K
Sbjct: 503 MSRQLAALSK 512
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G DV+ ++TGSGKTLA+ IP I+ L +R KI+ DG+ A+II P
Sbjct: 69 LTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPTIESL--IRNKITEYDGLAALIISP 126
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ K + +TGG+ +K EK R+ K ++ILV TPGR+ H
Sbjct: 127 TRELAVQIFEVLVKIGKHNNFSA-GLVTGGKDVKYEKERVSK-MNILVGTPGRISQHLNE 184
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
+ ++ S ++ LVLDEADR LD G+++ I L L P Q++L SAT
Sbjct: 185 SVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHL---PPTRQTLLFSAT 232
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I L L P Q++L SAT + +V+ LA ++
Sbjct: 188 METSNLQVLVLDEADRCLDMGFKKQIDNILGHL---PPTRQTLLFSATQSDSVKDLARLS 244
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP ++ + ++ T P+SL+Q++I P +L L SFI +
Sbjct: 245 LANPKRVGISSDQELSAT------PESLEQYYIKIPLDEKLDVLWSFIKSHLK------- 291
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 292 SKILVFFSSSKQVQYAYETFRT 313
>gi|426247188|ref|XP_004017368.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Ovis aries]
Length = 601
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 264/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLSVLRE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 IVEILLRREEKL-KKSQVGAIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ AR ++ G +I+VATPGRL D + E L + +E LVLDEADR+LD G+E I
Sbjct: 126 DVARFKELGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ H++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENHYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQKNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKAMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 142/325 (43%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIVEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + AR ++ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L A+C
Sbjct: 151 R-------KAEGLDL----------------------------------------ASC-- 161
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+E LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 162 -------VRSLEVLVLDEADRLLDMGFETSINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP++I + ++T P L+ H++V + L F+
Sbjct: 212 LVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|71747626|ref|XP_822868.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832536|gb|EAN78040.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 604
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 254/495 (51%), Gaps = 49/495 (9%)
Query: 387 FAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
+ P S ++P + L ++T +Q I L G D+L ++TGSGKTLA+
Sbjct: 105 YPPVSDYRSLKLNPHIVTALENDFKFQELTGIQGRCIPAALAGRDLLAEAKTGSGKTLAF 164
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT--GG 504
IPI++ + R ++ G A+II PTREL LQ + KL K F V ++L GG
Sbjct: 165 LIPIVEII--TRVGFRQRSGTAAIIIGPTRELCLQIEGVLLKLLKHFNGSV-TFLCCIGG 221
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
K E ++ G+ +++ATPGRLLDH K T + L +DEADR+LD G+E D+
Sbjct: 222 ISRKQEAFKLVSGMMVVMATPGRLLDHLKLTTDWLTKNLLVLAVDEADRVLDNGFEDDMR 281
Query: 565 EFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDS 624
E + +L +Q+ Q+ L SAT T V++LA ++ P + + T D+L
Sbjct: 282 EIVSLLPRQR---QTFLFSATQTTRVEQLARVSFYRPPLFISMKRKEDKATVDTL----- 333
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGEN 684
+Q +++ P + RL+ L F V + + K++VF ++++ +H EL + +
Sbjct: 334 -EQGYVICPSQQRLLVLYHF-------VRRNLKKKVIVFFSSRNAVSFHCELFNYIDVPC 385
Query: 685 IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDY 744
+AF HG Q +R+ + F + SGVL TDVAARGLD+P VDWIVQ+ P Y
Sbjct: 386 VAF---HGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPQVDWIVQFDPPDDPVKY 442
Query: 745 VHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDL 803
VHRVGRTAR G G++L+FL+P E ++ L + + + E DL
Sbjct: 443 VHRVGRTARAGRTGNALMFLLPQEKLFLKYLHDDAHVSVSEYTF--------------DL 488
Query: 804 SRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQI 863
+++ GNV E V L +SA Y ++ Y+ S L+++F+ +
Sbjct: 489 NKVK-GNVAE-------QLEQLVSANYYLRSSARLAYEGYLLSYS--SSQLKNVFDIHNL 538
Query: 864 HLGHFAKSFALRDAP 878
L AK FAL + P
Sbjct: 539 DLAAVAKGFALSEPP 553
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q I L G D+L ++TGSGKTLA+ IPI++ + R ++ G A+II
Sbjct: 132 ELTGIQGRCIPAALAGRDLLAEAKTGSGKTLAFLIPIVEII--TRVGFRQRSGTAAIIIG 189
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLT--GGEKMKSEKARIRKGISILVATPGRLLDH 122
PTREL LQ + KL K F V ++L GG K E ++ G+ +++ATPGRLLDH
Sbjct: 190 PTRELCLQIEGVLLKLLKHFNGSV-TFLCCIGGISRKQEAFKLVSGMMVVMATPGRLLDH 248
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
K T + L +DEADR+LD G+E D+ E + +L +Q+ Q+ L SAT T
Sbjct: 249 LKLTTDWLTKNLLVLAVDEADRVLDNGFEDDMREIVSLLPRQR---QTFLFSATQT 301
>gi|448122884|ref|XP_004204553.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|448125154|ref|XP_004205111.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|358249744|emb|CCE72810.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|358350092|emb|CCE73371.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
Length = 777
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 260/493 (52%), Gaps = 48/493 (9%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
+T +Q+ +I L G DV+ ++TGSGKTLA+ +P I+ L +R ++S DG+ A+I
Sbjct: 81 FVNLTGIQKKAIPAALKGSDVMATAKTGSGKTLAFLVPTIESL--IRNEVSEYDGLVALI 138
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTREL++Q E+ T + K + +TGG+ +K EK RI + ++ILV TPGRL H
Sbjct: 139 VSPTRELSIQIFEVLTSIGK-YNSFSAGLVTGGKDVKFEKERISR-MNILVGTPGRLSQH 196
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
+ L+ S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V+
Sbjct: 197 FNESVGLETSNLKVLVLDEADRCLDMGFKKQVDNIIGHLP---PTRQTLLYSATFSQSVR 253
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA ++L +P++I S DI + T P+SL Q++ + P +L L SFI +
Sbjct: 254 DLARLSLADPMKI-GVSSDDIISET-----PESLDQYYAIIPLHEKLDMLWSFIKSHLK- 306
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
SK+LVF ++ + E T L I KL+G Q+ R E F +
Sbjct: 307 ------SKILVFFSSSKQVQFTYETFRT-LQPGIPLMKLYGRHKQTSRLETTYKFSKAQH 359
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK- 770
L TD+ ARGLD P +DW++Q P + YVHRVGR AR G +G SLL L+PSE +
Sbjct: 360 ACLFATDIVARGLDFPAIDWVIQVDCPEDAATYVHRVGRAARFGRQGKSLLMLLPSEEEG 419
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
+++ L + +I I+++ +K E + ++ +S ++
Sbjct: 420 MLKRLDSSKIGIKQMNIK-----------------------EKSKKTIRPQLQSLCFKEP 456
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKN 889
+ + + S+ F + + + + IF ++ +A S L AP++ I G G K
Sbjct: 457 QIKNLGQRAFISY--FKSVHIQKDKEIFKVNELSAEKYAHSLGLPGAPNIKIKGEGSNKE 514
Query: 890 KEELKNKKMAINK 902
K+ K +A++K
Sbjct: 515 KKNASRKLLALSK 527
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 109/176 (61%), Gaps = 7/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
+T +Q+ +I L G DV+ ++TGSGKTLA+ +P I+ L +R ++S DG+ A+I
Sbjct: 81 FVNLTGIQKKAIPAALKGSDVMATAKTGSGKTLAFLVPTIESL--IRNEVSEYDGLVALI 138
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
+ PTREL++Q E+ T + K + +TGG+ +K EK RI + ++ILV TPGRL H
Sbjct: 139 VSPTRELSIQIFEVLTSIGK-YNSFSAGLVTGGKDVKFEKERISR-MNILVGTPGRLSQH 196
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ L+ S ++ LVLDEADR LD G+++ + + L P Q++L SAT +
Sbjct: 197 FNESVGLETSNLKVLVLDEADRCLDMGFKKQVDNIIGHL---PPTRQTLLYSATFS 249
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L+ S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V+ LA ++
Sbjct: 203 LETSNLKVLVLDEADRCLDMGFKKQVDNIIGHL---PPTRQTLLYSATFSQSVRDLARLS 259
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L +P++I S DI + T P+SL Q++ + P +L L SFI +
Sbjct: 260 LADPMKI-GVSSDDIISET-----PESLDQYYAIIPLHEKLDMLWSFIKSHLK------- 306
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ + E T
Sbjct: 307 SKILVFFSSSKQVQFTYETFRT 328
>gi|426194090|gb|EKV44022.1| hypothetical protein AGABI2DRAFT_153325 [Agaricus bisporus var.
bisporus H97]
Length = 828
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 263/515 (51%), Gaps = 54/515 (10%)
Query: 389 PTSYEEFPG--IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
P + F G I K+ L +G ++T +Q SI L G DVL ++TGSGKTLA+
Sbjct: 50 PADLKLFAGLPISENTKRGLKKGF-FVEMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAF 108
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
IP+++ L R K DG+ A+II PTRELA+Q E+ + T+ + GG+
Sbjct: 109 LIPVLEAL--YRRKWGAVDGLGALIISPTRELAVQIFEVLRSIGGYHTFSA-GLVIGGKN 165
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K EK R+ + ++ILVATPGRLL H T ++ LVLDEADRILD G++R ++
Sbjct: 166 LKDEKDRLSR-MNILVATPGRLLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSAL 224
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
L L K + Q++L SAT T +V LA ++L+ P+ I + + T IP +L+
Sbjct: 225 LSHLPKSR---QTLLFSATQTQSVNDLARLSLKEPVSIGISSPGE---ATGDTYIPATLE 278
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
QH++V+ +L L SFI Q K LVFM+ + E + I
Sbjct: 279 QHYVVSDLDKKLDILWSFIKTHLQ-------CKTLVFMSACKQVRFVYETFCR-MHPGIP 330
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG QS R +F F + K VL TD+AARGLD P VDW+VQ AP Y+H
Sbjct: 331 LIHLHGKQKQSARLTMFNKFATTKHAVLFATDIAARGLDFPSVDWVVQLDAPEDVETYIH 390
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDC-LQNLLSVKMEGDLS 804
RVGRTAR +G LL L PSE + + L+ + + + +IK++ QN+ E L
Sbjct: 391 RVGRTARYESKGKGLLMLCPSEEEGMTAVLEKKGLEVNKIKIRPSKTQNI-----ENQLQ 445
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
+LA Q + A + + S++R + Y + + +F ++
Sbjct: 446 KLA-------------------FQDPEIKYLAQRAFVSYLR--SIYLQKHKSVFKIDELP 484
Query: 865 LGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMA 899
+ FA+S L AP + K +KE +K +K A
Sbjct: 485 VERFAESLGLPGAPKI-----KFLSKEAVKRRKNA 514
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
++T +Q SI L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A+I
Sbjct: 74 FVEMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAFLIPVLEAL--YRRKWGAVDGLGALI 131
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ + T+ + GG+ +K EK R+ + ++ILVATPGRLL H
Sbjct: 132 ISPTRELAVQIFEVLRSIGGYHTFSA-GLVIGGKNLKDEKDRLSR-MNILVATPGRLLQH 189
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T
Sbjct: 190 MDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFSATQT 242
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++ LVLDEADRILD G++R ++ L L K + Q++L S
Sbjct: 182 TPGRLLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFS 238
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L+ P+ I + + T IP +L+QH++V+ +L L S
Sbjct: 239 ATQTQSVNDLARLSLKEPVSIGISSPGE---ATGDTYIPATLEQHYVVSDLDKKLDILWS 295
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q K LVFM+
Sbjct: 296 FIKTHLQ-------CKTLVFMSA 311
>gi|409078086|gb|EKM78450.1| hypothetical protein AGABI1DRAFT_121530 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 832
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 259/499 (51%), Gaps = 52/499 (10%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
K+ L +G ++T +Q SI L G DVL ++TGSGKTLA+ IP+++ L R K
Sbjct: 70 KRGLKKGF-FVEMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAFLIPVLEAL--YRRKWG 126
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
DG+ A+II PTRELA+Q E+ + T+ + GG+ +K EK R+ + ++ILV
Sbjct: 127 AVDGLGALIISPTRELAVQIFEVLRSIGGYHTFSA-GLVIGGKNLKDEKDRLSR-MNILV 184
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
ATPGRLL H T ++ LVLDEADRILD G++R ++ L L K + Q++L
Sbjct: 185 ATPGRLLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLF 241
Query: 583 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
SAT T +V LA ++L+ P+ I + + T IP +L+QH++V+ +L L
Sbjct: 242 SATQTQSVNDLARLSLKEPVSIGISSPGE---ATGDTYIPATLEQHYVVSDLDKKLDILW 298
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SFI Q K LVFM+ + E + I LHG QS R +
Sbjct: 299 SFIKTHLQ-------CKTLVFMSACKQVRFVYETFCR-MHPGIPLIHLHGKQKQSARLTM 350
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F F + K VL TD+AARGLD P VDW+VQ AP Y+HRVGRTAR +G LL
Sbjct: 351 FNKFATTKHAVLFATDIAARGLDFPSVDWVVQLDAPEDVETYIHRVGRTARYESKGKGLL 410
Query: 763 FLIPSEVK-LVEELQNRRIRIEEIKLKDC-LQNLLSVKMEGDLSRLADGNVETAATALQM 820
L PSE + + L+ + +++ +IK++ QN+ E L +LA
Sbjct: 411 VLCPSEEEGMTMALETKGLQVNKIKIRPSKTQNI-----ENQLQKLA------------- 452
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q + A + + S++R + Y + + +F ++ + FA+S L AP +
Sbjct: 453 ------FQDPEIKYLAQRAFVSYLR--SIYLQKHKSVFKIDELPVERFAESLGLPGAPKI 504
Query: 881 ISGIGKPKNKEELKNKKMA 899
K +KE +K +K A
Sbjct: 505 -----KFLSKEAVKRRKNA 518
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
++T +Q SI L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A+I
Sbjct: 78 FVEMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAFLIPVLEAL--YRRKWGAVDGLGALI 135
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ + T+ + GG+ +K EK R+ + ++ILVATPGRLL H
Sbjct: 136 ISPTRELAVQIFEVLRSIGGYHTFSA-GLVIGGKNLKDEKDRLSR-MNILVATPGRLLQH 193
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T
Sbjct: 194 MDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFSATQT 246
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++ LVLDEADRILD G++R ++ L L K + Q++L S
Sbjct: 186 TPGRLLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFS 242
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L+ P+ I + + T IP +L+QH++V+ +L L S
Sbjct: 243 ATQTQSVNDLARLSLKEPVSIGISSPGE---ATGDTYIPATLEQHYVVSDLDKKLDILWS 299
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q K LVFM+
Sbjct: 300 FIKTHLQ-------CKTLVFMSA 315
>gi|195572770|ref|XP_002104368.1| pit [Drosophila simulans]
gi|194200295|gb|EDX13871.1| pit [Drosophila simulans]
Length = 918
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 225/374 (60%), Gaps = 25/374 (6%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 378
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 379 IEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 428
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 429 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 481
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTA+ G G +LL + P
Sbjct: 482 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTAKGSGTSGHALLLMRPE 541
Query: 768 EVKLVEELQNRRIR 781
E+ + + + R R
Sbjct: 542 ELGFLCQSRPPRCR 555
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 377
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 378 RIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 437
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 438 VFFSSCMS 445
>gi|242803584|ref|XP_002484204.1| DEAD box RNA helicase (Hca4), putative [Talaromyces stipitatus
ATCC 10500]
gi|218717549|gb|EED16970.1| DEAD box RNA helicase (Hca4), putative [Talaromyces stipitatus ATCC
10500]
Length = 817
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 249/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q SI L G D+L ++TGSGKTLA+ +P+++ L R K + DG+ A+++ P
Sbjct: 72 LTDIQSRSIPYALKGRDILGAAKTGSGKTLAFLVPVLENL--YRKKWTEYDGLGAIVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T L ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT T V LA
Sbjct: 188 TAELDVYNLQMLVLDEADRIMDMGFQQTVDAIIEHLPKTR---QTMLFSATQTKKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H T S P +L+QH+I+TP +L L SFI +
Sbjct: 245 RLSLQDP------EYVAVHETAAS-ATPSTLQQHYIITPLPEKLDTLYSFIRSNLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VFM++ + E L L I LHG Q R ++ F K VL
Sbjct: 294 ---SKTIVFMSSGKQVRFVYESLRH-LQPGIPLLHLHGRQKQGGRLDITTRFAQSKHAVL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR G ++LFL PSE + +++
Sbjct: 350 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERNGRAVLFLDPSEEEGMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ IE I +K Q + +++ M F+ L K L
Sbjct: 410 RLEQKKVPIERINVKAKKQQSIKDQLQ------------------NMCFKDPEL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + + + + +F K + L FA S L AP +
Sbjct: 449 --GQKAFISYVK--SIHVQKDKEVFKVKDLALDAFASSLGLPGAPRI 491
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 84/314 (26%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI L G D+L ++TGSGKTLA+ +P+++ L R K + DG+ A+++ P
Sbjct: 72 LTDIQSRSIPYALKGRDILGAAKTGSGKTLAFLVPVLENL--YRKKWTEYDGLGAIVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T L ++ LVLDEADRI+D G+++ + +E L K + Q++L SA
Sbjct: 188 TAELDVYNLQMLVLDEADRIMDMGFQQTVDAIIEHLPKTR---QTMLFSA---------- 234
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVL-LSATLTPAVQR 244
T+T K S + L L Q P++ +V +A+ TP+
Sbjct: 235 -TQTKKVSDLARLSL------------------------QDPEYVAVHETAASATPS--- 266
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
+L+QH+I+TP +L L SFI +
Sbjct: 267 -------------------------------TLQQHYIITPLPEKLDTLYSFIRSNLK-- 293
Query: 305 NEDEESKMLVFMAT 318
SK +VFM++
Sbjct: 294 -----SKTIVFMSS 302
>gi|68470912|ref|XP_720463.1| hypothetical protein CaO19.2712 [Candida albicans SC5314]
gi|68471370|ref|XP_720233.1| hypothetical protein CaO19.10227 [Candida albicans SC5314]
gi|74627403|sp|Q5AF95.1|DBP4_CANAL RecName: Full=ATP-dependent RNA helicase DBP4
gi|46442091|gb|EAL01383.1| hypothetical protein CaO19.10227 [Candida albicans SC5314]
gi|46442332|gb|EAL01622.1| hypothetical protein CaO19.2712 [Candida albicans SC5314]
Length = 765
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 268/500 (53%), Gaps = 47/500 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E ++ +T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L +R KI+
Sbjct: 61 KGLKEATFVS-LTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVIESL--IRNKITE 117
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+I+ PTRELA+Q E+ TK+ K T+ +TGG+ ++ EK R+ + ++ILV
Sbjct: 118 YDGLAALIVSPTRELAVQIFEVLTKIGKYNTFSA-GLVTGGKDVQFEKERVSR-MNILVG 175
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+ H ++ S ++ LVLDEADR LD G+++ I L L + Q++L S
Sbjct: 176 TPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFS 232
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + +V LA ++L NP +I + ++ T P+SL+Q+++ P +L L S
Sbjct: 233 ATQSESVNDLARLSLTNPNKIGVSSDQEVSAT------PESLEQYYVKVPLDEKLDVLWS 286
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SK+LVF ++ Y E T L I+ KL+G Q+ R E
Sbjct: 287 FIKSHLK-------SKILVFFSSSKQVQYTYETFRT-LQPGISLMKLYGRHKQTSRLETT 338
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TD+ ARGLD P +DW+VQ P + YVHRVGR+AR G +G SLL
Sbjct: 339 MKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRKGKSLLM 398
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+PSE EE +R++I +I+ K L+++K + + +++ +
Sbjct: 399 LLPSE----EEGMLKRLKIHKIEPK-----LMNIK-------------QKSKKSIRPQLQ 436
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + ++ + + ++ F + + + + +F +++ +A S L AP + I
Sbjct: 437 SLCFKDPVMKNLGQRAFIAY--FKSVHIQKDKDVFKVEELPAESYAASLGLPGAPKIKIK 494
Query: 883 GIGKPKNKEELKNKKMAINK 902
G K K+ K +A+ K
Sbjct: 495 GGESNKEKKNASRKLIALAK 514
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L +R KI+ DG+ A+I+ P
Sbjct: 71 LTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVIESL--IRNKITEYDGLAALIVSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ TK+ K T+ +TGG+ ++ EK R+ + ++ILV TPGR+ H
Sbjct: 129 TRELAVQIFEVLTKIGKYNTFSA-GLVTGGKDVQFEKERVSR-MNILVGTPGRISQHLNE 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
++ S ++ LVLDEADR LD G+++ I L L + Q++L SAT
Sbjct: 187 AVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFSAT 234
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I L L + Q++L SAT + +V LA ++
Sbjct: 190 METSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFSATQSESVNDLARLS 246
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + ++ T P+SL+Q+++ P +L L SFI +
Sbjct: 247 LTNPNKIGVSSDQEVSAT------PESLEQYYVKVPLDEKLDVLWSFIKSHLK------- 293
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 294 SKILVFFSSSKQVQYTYETFRT 315
>gi|167537882|ref|XP_001750608.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770904|gb|EDQ84581.1| predicted protein [Monosiga brevicollis MX1]
Length = 395
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 242/439 (55%), Gaps = 50/439 (11%)
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
+A+ +P ++ +Q + K + ++G +II PTREL+LQT + L + + + G
Sbjct: 1 MAFLLPAVELMQTL--KFTPRNGTGIIIISPTRELSLQTYGVVQDLLR-YHPQTHGLVMG 57
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G ++E R+ KG+++LVATPGRLLDH ++T+ + ++ L++DEADRIL G+E ++
Sbjct: 58 GANRRAEADRLVKGVNVLVATPGRLLDHLQNTQGFLYKNLQCLIIDEADRILQVGFEEEM 117
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIP 622
+ +++L K++ Q++L SAT T V+ LA ++L+ P+ + D D
Sbjct: 118 RQIIKLLPKKR---QTLLFSATQTRKVEDLARISLKGEPLYVGVNDQ-------DEEATA 167
Query: 623 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG 682
D+++Q +I+ P R + L +F+ + + K++VF+++ + +H ELL+ +
Sbjct: 168 DNIEQGYIICPADKRFLLLFTFL-------KRNLKKKVMVFLSSCNSVKFHAELLNYI-- 218
Query: 683 ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSST 742
+I +HG Q +RT F F + + G+L+CTDVAARGLD+ VDWIVQY P
Sbjct: 219 -DIPVLDIHGKQKQGKRTTTFFEFCNAEHGILLCTDVAARGLDISNVDWIVQYDPPDDPR 277
Query: 743 DYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
DY+HRVGRTAR G +LLFL+P EV ++ L+ ++R +E +
Sbjct: 278 DYIHRVGRTARGTDKSGKALLFLLPEEVAFLKYLKQAKVRPKEYEFP------------- 324
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
+ +QM E + + LH SA +GY S+++ YAS+S L+ IF+
Sbjct: 325 ----------AAKISNVQMQLEKLIQENYYLHKSAKEGYRSYLQAYASHS--LKQIFDVN 372
Query: 862 QIHLGHFAKSFALRDAPSV 880
+ L K+F P+V
Sbjct: 373 TLDLSRVGKAFGFSVPPNV 391
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 93/144 (64%), Gaps = 6/144 (4%)
Query: 35 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 94
+A+ +P ++ +Q + K + ++G +II PTREL+LQT + L + + + G
Sbjct: 1 MAFLLPAVELMQTL--KFTPRNGTGIIIISPTRELSLQTYGVVQDLLR-YHPQTHGLVMG 57
Query: 95 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 154
G ++E R+ KG+++LVATPGRLLDH ++T+ + ++ L++DEADRIL G+E ++
Sbjct: 58 GANRRAEADRLVKGVNVLVATPGRLLDHLQNTQGFLYKNLQCLIIDEADRILQVGFEEEM 117
Query: 155 AEFLEILKKQKPQFQSILLSATLT 178
+ +++L K++ Q++L SAT T
Sbjct: 118 RQIIKLLPKKR---QTLLFSATQT 138
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 83/147 (56%), Gaps = 18/147 (12%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++T+ + ++ L++DEADRIL G+E ++ + +++L K++ Q++L SAT T V+
Sbjct: 87 QNTQGFLYKNLQCLIIDEADRILQVGFEEEMRQIIKLLPKKR---QTLLFSATQTRKVED 143
Query: 245 LAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
LA ++L+ P+ + D D D+++Q +I+ P R + L +F+
Sbjct: 144 LARISLKGEPLYVGVNDQ-------DEEATADNIEQGYIICPADKRFLLLFTFL------ 190
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
+ + K++VF+++ + +H ELL+
Sbjct: 191 -KRNLKKKVMVFLSSCNSVKFHAELLN 216
>gi|118389642|ref|XP_001027904.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89309674|gb|EAS07662.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 642
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 283/535 (52%), Gaps = 59/535 (11%)
Query: 381 PVSEA-LFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTG 439
P S A F+ +++ P K+ + M T +T +Q +I +L G DVL ++TG
Sbjct: 141 PTSRAGFFSNDLFDDLEVCKP--TKDALKQMKFTNMTHIQSRTIPHLLKGRDVLGAAKTG 198
Query: 440 SGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPS 499
SGKTLA+ IP I+ L + S GI ++I PTRELA Q ++ +L F
Sbjct: 199 SGKTLAFLIPAIEMLYKTNFVQSMGTGI--IVITPTRELATQIYDVAKQLM-FFHSKTLG 255
Query: 500 WLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGY 559
L GG K+E +++ G+++++ATPGRLLDH ++T + + L++DEAD IL G+
Sbjct: 256 LLIGGANRKAEAIKLKTGVNMIIATPGRLLDHLQNTAGFAYHNLLGLIIDEADAILRIGF 315
Query: 560 ERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQI---DAADSTDIHNTT 616
+ ++ E L++L + Q++L SAT + LA ++L+ PI I D A+++ +
Sbjct: 316 QEELTEILKLLPIDR---QTVLFSATQNKKIDDLARLSLKQPIYIGVDDVAETSTVEGLE 372
Query: 617 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 676
VI D+ K K RL L +F+ + ++ K++VF ++ + +H++L
Sbjct: 373 QGYVIIDADK--------KFRL--LFTFLQKQ-------KKKKVMVFFSSCNSVKFHSDL 415
Query: 677 LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
L+ V +I +HG Q +R F F + SGVL+CTDVAARGLD+P VDWIVQY
Sbjct: 416 LNYV---DIPVLDIHGKQKQQKRLNTFYEFSNATSGVLLCTDVAARGLDIPNVDWIVQYD 472
Query: 737 APSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
P + +Y+HRVGRT R + G +LLFL+P E ++ L+ ++ + E + +
Sbjct: 473 PPDDTKEYIHRVGRTCRGANTTGKALLFLLPEEKDYLKYLKAAKVNLNEYEFPE------ 526
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
++LA+ +Q F+ V + L+ A + + S++ Y+++S L+
Sbjct: 527 --------NKLAN---------IQDQFDKLVERNYFLNRCAFEAFRSYLHSYSAHS--LK 567
Query: 856 HIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRG 910
IF+ + L +SF + P V + K +K + KNK I+ K+ K+ G
Sbjct: 568 DIFDVANLDLQKIGRSFGFKIPPRVNLNV-KVSSKTQRKNKVKQISDSKTGKKSG 621
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 105/176 (59%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q +I +L G DVL ++TGSGKTLA+ IP I+ L + S GI
Sbjct: 169 MKFTNMTHIQSRTIPHLLKGRDVLGAAKTGSGKTLAFLIPAIEMLYKTNFVQSMGTGI-- 226
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA Q ++ +L F L GG K+E +++ G+++++ATPGRLL
Sbjct: 227 IVITPTRELATQIYDVAKQLM-FFHSKTLGLLIGGANRKAEAIKLKTGVNMIIATPGRLL 285
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T + + L++DEAD IL G++ ++ E L++L + Q++L SAT
Sbjct: 286 DHLQNTAGFAYHNLLGLIIDEADAILRIGFQEELTEILKLLPIDR---QTVLFSAT 338
>gi|238881563|gb|EEQ45201.1| hypothetical protein CAWG_03515 [Candida albicans WO-1]
Length = 765
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 268/500 (53%), Gaps = 47/500 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E ++ +T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L +R KI+
Sbjct: 61 KGLKEATFVS-LTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVIESL--IRNKITE 117
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+I+ PTRELA+Q E+ TK+ K T+ +TGG+ ++ EK R+ + ++ILV
Sbjct: 118 YDGLAALIVSPTRELAVQIFEVLTKIGKYNTFSA-GLVTGGKDVQFEKERVSR-MNILVG 175
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+ H ++ S ++ LVLDEADR LD G+++ I L L + Q++L S
Sbjct: 176 TPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFS 232
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + +V LA ++L NP +I + ++ T P+SL+Q+++ P +L L S
Sbjct: 233 ATQSESVNDLARLSLTNPNKIGVSSDQEVSAT------PESLEQYYVKVPLDEKLDVLWS 286
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SK+LVF ++ Y E T L I+ KL+G Q+ R E
Sbjct: 287 FIKSHLK-------SKILVFFSSSKQVQYTYETFRT-LQPGISLMKLYGRHKQTSRLETT 338
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TD+ ARGLD P +DW+VQ P + YVHRVGR+AR G +G SLL
Sbjct: 339 MKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRKGKSLLM 398
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+PSE EE +R++I +I+ K L+++K + + +++ +
Sbjct: 399 LLPSE----EEGMLKRLKIHKIEPK-----LMNIK-------------QKSKKSIRPQLQ 436
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + ++ + + ++ F + + + + +F +++ +A S L AP + I
Sbjct: 437 SLCFKDPVMKNLGQRAFIAY--FKSVHIQKDKDVFKVEELPAESYAASLGLPGAPKIKIK 494
Query: 883 GIGKPKNKEELKNKKMAINK 902
G K K+ K +A+ K
Sbjct: 495 GGESNKEKKNASRKLIALAK 514
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L +R KI+ DG+ A+I+ P
Sbjct: 71 LTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVIESL--IRNKITEYDGLAALIVSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ TK+ K T+ +TGG+ ++ EK R+ + ++ILV TPGR+ H
Sbjct: 129 TRELAVQIFEVLTKIGKYNTFSA-GLVTGGKDVQFEKERVSR-MNILVGTPGRISQHLNE 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
++ S ++ LVLDEADR LD G+++ I L L + Q++L SAT
Sbjct: 187 AVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFSAT 234
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I L L + Q++L SAT + +V LA ++
Sbjct: 190 METSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFSATQSESVNDLARLS 246
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + ++ T P+SL+Q+++ P +L L SFI +
Sbjct: 247 LTNPNKIGVSSDQEVSAT------PESLEQYYVKVPLDEKLDVLWSFIKSHLK------- 293
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 294 SKILVFFSSSKQVQYTYETFRT 315
>gi|241954424|ref|XP_002419933.1| ATP-dependent RNA helicase, putative; atp-dependent rna helicase
dbp4 (ec 3.6.1.-) (dead box protein 4 (helicase ca4)
(helicase uf1) [Candida dubliniensis CD36]
gi|223643274|emb|CAX42148.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 765
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 267/500 (53%), Gaps = 47/500 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E ++ +T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L +R KI+
Sbjct: 61 KGLKEATFVS-LTDIQKKTIPVALKGEDLMGTARTGSGKTLAFLIPVIESL--IRNKITE 117
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+I+ PTRELA+Q E+ TK+ K + +TGG+ ++ EK R+ + ++ILV
Sbjct: 118 YDGLAALIVSPTRELAVQIFEVLTKIGK-YNSFSAGLVTGGKDVQFEKERVSR-MNILVG 175
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+ H ++ S ++ LVLDEADR LD G+++ I L L + Q++L S
Sbjct: 176 TPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFS 232
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + +V LA ++L NP +I + ++ T P+SL+Q+++ P +L L S
Sbjct: 233 ATQSESVNDLARLSLTNPNKIGVSSDQEVSAT------PESLEQYYVKVPLDEKLDVLWS 286
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SK+LVF ++ Y E T L I+ KL+G Q+ R E
Sbjct: 287 FIKSHLK-------SKILVFFSSSKQVQYTYETFRT-LQPGISLMKLYGRHKQTSRLETT 338
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TD+ ARGLD P +DW+VQ P + YVHRVGR+AR G +G SLL
Sbjct: 339 MKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRKGKSLLM 398
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+PSE EE +R++I +I+ K L+++K + + +++ +
Sbjct: 399 LLPSE----EEGMLKRLKIHKIEPK-----LMNIK-------------QKSKKSIRPQLQ 436
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + ++ + + ++ F + + + + +F +++ +A S L AP + I
Sbjct: 437 SLCFKDPVMKNLGQRAFIAY--FKSVHIQKDKDVFKVEELPAESYAASLGLPGAPRIKIK 494
Query: 883 GIGKPKNKEELKNKKMAINK 902
G K K+ K +A+ K
Sbjct: 495 GGESNKEKKNASRKLIALAK 514
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L +R KI+ DG+ A+I+ P
Sbjct: 71 LTDIQKKTIPVALKGEDLMGTARTGSGKTLAFLIPVIESL--IRNKITEYDGLAALIVSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ TK+ K + +TGG+ ++ EK R+ + ++ILV TPGR+ H
Sbjct: 129 TRELAVQIFEVLTKIGK-YNSFSAGLVTGGKDVQFEKERVSR-MNILVGTPGRISQHLNE 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
++ S ++ LVLDEADR LD G+++ I L L + Q++L SAT
Sbjct: 187 AVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFSAT 234
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I L L + Q++L SAT + +V LA ++
Sbjct: 190 METSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR---QTLLFSATQSESVNDLARLS 246
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + ++ T P+SL+Q+++ P +L L SFI +
Sbjct: 247 LTNPNKIGVSSDQEVSAT------PESLEQYYVKVPLDEKLDVLWSFIKSHLK------- 293
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 294 SKILVFFSSSKQVQYTYETFRT 315
>gi|443900245|dbj|GAC77571.1| RNA Helicase [Pseudozyma antarctica T-34]
Length = 909
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 261/501 (52%), Gaps = 58/501 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNE----GM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
TS+ E P F + L++ G+ T +T +Q S+ L G DVL ++TGSGK
Sbjct: 52 TSFVEPPNFKQFAQLPLSDRTRRGLKKAGYTDMTDIQAKSLPLSLKGKDVLGAARTGSGK 111
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
TLA+ IP+++ L R K DG+ A++I PTRELA+Q E+ K+ T+ +
Sbjct: 112 TLAFLIPVLEIL--FRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGPYHTFSA-GLVI 168
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GG+ +K EK R+ + I+ILVATPGRLL H T S ++ LVLDEADRILD G+ R
Sbjct: 169 GGKDVKQEKDRLSR-INILVATPGRLLQHMDQTLGFDTSNLQILVLDEADRILDMGFSRT 227
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIP 622
+ +E L + + Q++L SAT T V+ LA ++LQNP + + + +T P
Sbjct: 228 LNAIVENLPRDR---QTMLFSATQTKRVKDLARLSLQNPEYVAVREPENEGST------P 278
Query: 623 DSLKQHFIVTPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
L+QH+++ + +L L SFI KC K LVFM++ + E
Sbjct: 279 KGLEQHYMLVELEKKLDLLFSFIRTHTKC---------KALVFMSSCRQVQFVHETFCK- 328
Query: 681 LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
L I+ LHG Q++R ++F F + +L TD+AARGLD P VDW++Q P
Sbjct: 329 LRPGISLMALHGKQKQAKRLQIFTQFTKTQHAMLFATDIAARGLDFPAVDWVIQLDVPED 388
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKM 799
Y+HRVGRTAR +G+SLLF++PSE K ++E L + I I IK K
Sbjct: 389 VDTYIHRVGRTARYTAKGNSLLFVLPSEEKGMLEALATKNIPIGRIKPK----------- 437
Query: 800 EGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
E+ ++Q ++ Q+ + A K + S+VR + + + + IF+
Sbjct: 438 ------------ESKTQSIQNQLQAFAFQEPQIKHLAQKAFVSYVR--SIHLQKNKEIFD 483
Query: 860 FKQIHLGHFAKSFALRDAPSV 880
+ L FA + L AP V
Sbjct: 484 VTALPLEPFAAALGLPGAPKV 504
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T +T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A++I
Sbjct: 82 TDMTDIQAKSLPLSLKGKDVLGAARTGSGKTLAFLIPVLEIL--FRRKWGPSDGLGALVI 139
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+Q E+ K+ T+ + GG+ +K EK R+ + I+ILVATPGRLL H
Sbjct: 140 SPTRELAIQIFEVLRKIGPYHTFSA-GLVIGGKDVKQEKDRLSR-INILVATPGRLLQHM 197
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ R + +E L + + Q++L SAT T
Sbjct: 198 DQTLGFDTSNLQILVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLFSATQT 249
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 22/145 (15%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +TL F S ++ LVLDEADRILD G+ R + +E L + + Q++L S
Sbjct: 189 TPGRLLQHMDQTLGFDTSNLQILVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLFS 245
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V+ LA ++LQNP + + + +T P L+QH+++ + +L L S
Sbjct: 246 ATQTKRVKDLARLSLQNPEYVAVREPENEGST------PKGLEQHYMLVELEKKLDLLFS 299
Query: 296 FIL--GKCQNVNEDEESKMLVFMAT 318
FI KC K LVFM++
Sbjct: 300 FIRTHTKC---------KALVFMSS 315
>gi|338727802|ref|XP_001915471.2| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Equus caballus]
Length = 628
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 266/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E ++ +T VQ +I L DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPXVLGVLRE-LSFPYMTPVQSATIPLFLKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIR-KGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ AR + +G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVARFKEQGGNIIVATPGRLEDMFRRKAEGLALASCVRALDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGLAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
++ +HG M + +R ++F FR + SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 SVKIMCIHGKM-KYKRNKIFMEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQKNTMDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLQSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFARLARGFALLRMPKMPELRGK 469
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 142/330 (43%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++ +T VQ +I L DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LSFPYMTPVQSATIPLFLKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ + K F GG + AR + +G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLALASCVRALDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGLAASSTQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 -----RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|302506493|ref|XP_003015203.1| hypothetical protein ARB_06326 [Arthroderma benhamiae CBS 112371]
gi|291178775|gb|EFE34563.1| hypothetical protein ARB_06326 [Arthroderma benhamiae CBS 112371]
Length = 816
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 252/471 (53%), Gaps = 48/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGAL 126
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKV 241
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++LQ+P I +H T S P +L+QH++VTP +L L SFI +
Sbjct: 242 SDLARLSLQDPEYIS------VHQTASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSLK 294
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF ++ + E + I LHG Q R ++ F + K
Sbjct: 295 -------SKIIVFFSSSKEVRFVYEAFRQ-MQPGIPLLHLHGRQKQGARLDITHKFSASK 346
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EV 769
+ L TDV ARGLD P VDW++Q P S Y+HRVGRTAR +G ++LFL PS E+
Sbjct: 347 NSCLFATDVVARGLDFPAVDWVIQLDCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEI 406
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++ L+ ++I IE+I ++ Q + +++ M F+ L
Sbjct: 407 GMLSRLEQKKIPIEKINIRANKQQSIKHQLQ------------------NMCFKDPQL-- 446
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K L K +TS+V+ + + + + +F+ K + L +A S L AP +
Sbjct: 447 KYL---GQKAFTSYVK--SIHIQKDKEVFDVKALPLEEYAASLGLPGAPRI 492
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 82/317 (25%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGAL 126
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSA------ 235
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
T+T K S + L L Q P++ SV
Sbjct: 236 -----TQTKKVSDLARLSL------------------------QDPEYISV--------- 257
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
H T S P +L+QH++VTP +L L SFI
Sbjct: 258 -----------------------HQTASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSL 293
Query: 302 QNVNEDEESKMLVFMAT 318
+ SK++VF ++
Sbjct: 294 K-------SKIIVFFSS 303
>gi|114050983|ref|NP_001039472.1| ATP-dependent RNA helicase DDX55 [Bos taurus]
gi|115502143|sp|Q2NL08.1|DDX55_BOVIN RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|84708796|gb|AAI11256.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Bos taurus]
Length = 601
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 260/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPKVLSVLRE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I + L K +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 IEEILLRREEKF-KKSQVGAIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ AR ++ G +I+VATPGRL D + E L + +E LVLDEADR+LD G+E I
Sbjct: 126 DVARFKELGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ H++V + L F+ ++ K LVF +T +Y+ + L T++ +
Sbjct: 241 RLENHYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALETLV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYISFLAINQKCPLQEMKLQKNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
++ L + + K + S+V+ YA + +L IF K
Sbjct: 406 ------------------KLKAMALGDRAVFEKGMKAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 141/327 (43%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI + L K +K + A+II P
Sbjct: 32 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIEEILLRREEKF-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + AR ++ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L A+C
Sbjct: 151 R-------KAEGLDL----------------------------------------ASC-- 161
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+E LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 162 -------VRSLEVLVLDEADRLLDMGFETSINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP++I + ++T P L+ H++V + L F+
Sbjct: 212 LVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
++ K LVF +T +Y+ + L T
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKALET 289
>gi|212539820|ref|XP_002150065.1| DEAD box RNA helicase (Hca4), putative [Talaromyces marneffei ATCC
18224]
gi|210067364|gb|EEA21456.1| DEAD box RNA helicase (Hca4), putative [Talaromyces marneffei ATCC
18224]
Length = 819
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 249/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q SI L G D+L ++TGSGKTLA+ IP+++ L R K + DG+ A+++ P
Sbjct: 72 LTDIQSRSIPYALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKKWTEYDGLGAIVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T L ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT T V LA
Sbjct: 188 TAELDVYNLQMLVLDEADRIMDMGFQKTVDAIVEHLPKTR---QTLLFSATQTKKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H S P +L+QH+I+TP +L L SFI +
Sbjct: 245 RLSLQDP------EYVAVHEAAAS-ATPSTLQQHYIITPLPEKLDTLFSFIRSNLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VFM++ + E L L I LHG Q R ++ F + K VL
Sbjct: 294 ---SKTIVFMSSGKQVRFVYESLRH-LQPGIPLLHLHGRQKQGGRLDITTRFANSKHAVL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR G ++LFL PSE + +++
Sbjct: 350 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERNGRAVLFLDPSEEEGMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ IE I +K Q + +++ M F+ L K L
Sbjct: 410 RLEQKKVPIERINVKAKKQQSVKDQLQ------------------NMCFKDPEL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + + + + +F K + L FA S L AP +
Sbjct: 449 --GQKAFISYVK--SIHVQKDKEVFKVKDLALDAFAASLGLPGAPRI 491
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 152/314 (48%), Gaps = 84/314 (26%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI L G D+L ++TGSGKTLA+ IP+++ L R K + DG+ A+++ P
Sbjct: 72 LTDIQSRSIPYALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKKWTEYDGLGAIVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKVGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T L ++ LVLDEADRI+D G+++ + +E L K + Q++L SA
Sbjct: 188 TAELDVYNLQMLVLDEADRIMDMGFQKTVDAIVEHLPKTR---QTLLFSA---------- 234
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVL-LSATLTPAVQR 244
T+T K S + L L Q P++ +V +A+ TP+
Sbjct: 235 -TQTKKVSDLARLSL------------------------QDPEYVAVHEAAASATPS--- 266
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
+L+QH+I+TP +L L SFI +
Sbjct: 267 -------------------------------TLQQHYIITPLPEKLDTLFSFIRSNLK-- 293
Query: 305 NEDEESKMLVFMAT 318
SK +VFM++
Sbjct: 294 -----SKTIVFMSS 302
>gi|255721553|ref|XP_002545711.1| hypothetical protein CTRG_00492 [Candida tropicalis MYA-3404]
gi|240136200|gb|EER35753.1| hypothetical protein CTRG_00492 [Candida tropicalis MYA-3404]
Length = 770
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 267/500 (53%), Gaps = 47/500 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E ++ +T +Q+ +I L G D++ ++TGSGKTLA+ +P I+ L +R KI+
Sbjct: 61 KGLKESTFVS-LTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLVPTIESL--IRNKITE 117
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+II PTRELA+Q E+ TK+ ++ ++ +TGG+ ++ EK R+ + ++ILV
Sbjct: 118 YDGLAALIISPTRELAVQIFEVLTKIGRNNSFSA-GLVTGGKDVQYEKERVSR-MNILVG 175
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+ H ++ S ++ LVLDEADR LD G+ + I L L + Q++L S
Sbjct: 176 TPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPTTR---QTLLFS 232
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + +V+ LA ++L NP +I + +I T P+SL Q+++ P +L L S
Sbjct: 233 ATQSESVKDLARLSLTNPKKIGVSSDQEISAT------PESLDQYYVKVPLDEKLDVLWS 286
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SK+LVF ++ + E T L I+ KL+G Q+ R E
Sbjct: 287 FIKSHLK-------SKILVFFSSSKQVQFAYETFRT-LQPGISLMKLYGRHKQTARLETT 338
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
K F + L TD+ ARGLD P +DW+VQ P S YVHRVGR+AR G +G SLL
Sbjct: 339 KKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDSATYVHRVGRSARFGRQGKSLLM 398
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+PSE EE +R++I +I+ K +++K + + +++ +
Sbjct: 399 LLPSE----EEGMLKRLKIHKIEPK-----FMNIK-------------QKSKKSIRPQLQ 436
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + ++ + + ++ F + Y + + +F +++ +A S L AP + I
Sbjct: 437 SLCFKDPVMKNLGQRAFIAY--FKSIYIQKDKDVFKVEELPAEAYAASLGLPGAPKIKIK 494
Query: 883 GIGKPKNKEELKNKKMAINK 902
G K K+ + +A+ K
Sbjct: 495 GGESNKEKKNASRQLLALAK 514
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ +P I+ L +R KI+ DG+ A+II P
Sbjct: 71 LTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLVPTIESL--IRNKITEYDGLAALIISP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ TK+ ++ ++ +TGG+ ++ EK R+ + ++ILV TPGR+ H
Sbjct: 129 TRELAVQIFEVLTKIGRNNSFSA-GLVTGGKDVQYEKERVSR-MNILVGTPGRISQHLNE 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT
Sbjct: 187 AVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPTTR---QTLLFSAT 234
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT + +V+ LA ++
Sbjct: 190 METSNLQVLVLDEADRCLDMGFRKQIDNILGHLPTTR---QTLLFSATQSESVKDLARLS 246
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + +I T P+SL Q+++ P +L L SFI +
Sbjct: 247 LTNPKKIGVSSDQEISAT------PESLDQYYVKVPLDEKLDVLWSFIKSHLK------- 293
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ + E T
Sbjct: 294 SKILVFFSSSKQVQFAYETFRT 315
>gi|118381921|ref|XP_001024120.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89305887|gb|EAS03875.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 767
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 280/531 (52%), Gaps = 65/531 (12%)
Query: 385 ALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
++F + E IHP + + L E N +T +Q+ I IL ++ ++S+TGSGKTL
Sbjct: 203 SVFTAEKFGEIEQIHPKVVQALQES-NYETMTKIQKEGIPQILKKENIALKSETGSGKTL 261
Query: 445 AYAIPIIQKLQEM--RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
Y +PII L M KI+R+DG Y +I PTREL +Q E+ + K +++ L
Sbjct: 262 TYLVPIISNLVHMGTDQKITREDGSYVFVICPTRELCIQCEEVAQLVTKKSKYLITGCLM 321
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GGE K EKAR+RKG++IL ATPGRLL H K+T + FSK++++V +E+DR LD G+++D
Sbjct: 322 GGENPKKEKARLRKGVTILFATPGRLLYHLKNTNSFLFSKLKYIVFEESDRTLDMGFKKD 381
Query: 563 IAEFLEILKKQKPQF---QSILLSATLTPAVQRL-----------AGMTLQNPIQIDA-- 606
+ E +E L QK F Q IL+SA +V+ L G Q + D
Sbjct: 382 LEEIVEQL-TQKVSFEEVQKILISANFNDSVESLYLKMSTQTIKYVGFAKQKRNKADGPI 440
Query: 607 -ADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
+ H D + +PD+L Q++ + + R+ L S+ L Q ++K ++F+
Sbjct: 441 NYEEEKKHIKGDDMFKVPDTLIQYYSLINEEHRVPFLVSY-LSMLQ------DTKSIIFV 493
Query: 665 ATQDMADYHTELLST---------------VLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
+T D DY L VL + I FKLHG++ Q R+E + +F+
Sbjct: 494 STCDEVDYFAFLFDAMRYKDANGEVQQDDQVLKQKI--FKLHGNIEQRTRSETYFSFKRY 551
Query: 710 KSG-VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+ G +LI TDVA+RGLD V + + P+S ++Y +R+GRTAR+ +G SLL L E
Sbjct: 552 QGGAILISTDVASRGLDFYEVTHTILFDVPTSISEYCNRIGRTARIDQKGISLLILNNVE 611
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
V++++ I++ + + L K++ ++ + D ++T M + ++++
Sbjct: 612 RPYVDKMKKYGIKLNKFDDEPVLD-----KVQREIKQKYDVGMDT------MHYVESLIR 660
Query: 829 QKIL-----HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
Q I + A + Y S +R YA KD + IF K+++L AK F L
Sbjct: 661 QSIRDDKTKYILARRAYVSSLRAYARL-KD-KDIFRVKKLNLHLIAKGFGL 709
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 126/199 (63%), Gaps = 9/199 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIY 59
N +T +Q+ I IL ++ ++S+TGSGKTL Y +PII L M KI+R+DG Y
Sbjct: 228 NYETMTKIQKEGIPQILKKENIALKSETGSGKTLTYLVPIISNLVHMGTDQKITREDGSY 287
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
+I PTREL +Q E+ + K +++ L GGE K EKAR+RKG++IL ATPGRL
Sbjct: 288 VFVICPTRELCIQCEEVAQLVTKKSKYLITGCLMGGENPKKEKARLRKGVTILFATPGRL 347
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF---QSILLSAT 176
L H K+T + FSK++++V +E+DR LD G+++D+ E +E L QK F Q IL+SA
Sbjct: 348 LYHLKNTNSFLFSKLKYIVFEESDRTLDMGFKKDLEEIVEQL-TQKVSFEEVQKILISAN 406
Query: 177 LTPA--TCWCK-HTETLKF 192
+ + + K T+T+K+
Sbjct: 407 FNDSVESLYLKMSTQTIKY 425
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 52/314 (16%)
Query: 41 IIQKLQEMRPKIS---RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 97
++Q LQE + +K+GI IL +AL++ T K+ T++VP ++
Sbjct: 220 VVQALQESNYETMTKIQKEGIPQ--ILKKENIALKSE---TGSGKTLTYLVP-IISNLVH 273
Query: 98 MKSEKARIRK-GISILVATPGR-LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 155
M +++ R+ G + V P R L C+ L K ++L+ L G
Sbjct: 274 MGTDQKITREDGSYVFVICPTRELCIQCEEVAQLVTKKSKYLITG----CLMGG------ 323
Query: 156 EFLEILKKQKPQFQS--ILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYER 213
E KK+K + + +L AT K+T + FSK++++V +E+DR LD G+++
Sbjct: 324 ---ENPKKEKARLRKGVTILFATPGRLLYHLKNTNSFLFSKLKYIVFEESDRTLDMGFKK 380
Query: 214 DIAEFLEILKKQKPQF---QSVLLSATLTPAVQRL-----------AGMTLQNPIQIDA- 258
D+ E +E L QK F Q +L+SA +V+ L G Q + D
Sbjct: 381 DLEEIVEQL-TQKVSFEEVQKILISANFNDSVESLYLKMSTQTIKYVGFAKQKRNKADGP 439
Query: 259 --ADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVF 315
+ H D + +PD+L Q++ + + R+ L S+ L Q ++K ++F
Sbjct: 440 INYEEEKKHIKGDDMFKVPDTLIQYYSLINEEHRVPFLVSY-LSMLQ------DTKSIIF 492
Query: 316 MATQDMADYHTELL 329
++T D DY L
Sbjct: 493 VSTCDEVDYFAFLF 506
>gi|119471850|ref|XP_001258227.1| DEAD box RNA helicase (Hca4), putative [Neosartorya fischeri NRRL
181]
gi|134034072|sp|A1DNF9.1|DBP4_NEOFI RecName: Full=ATP-dependent RNA helicase dbp4
gi|119406379|gb|EAW16330.1| DEAD box RNA helicase (Hca4), putative [Neosartorya fischeri NRRL
181]
Length = 810
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 249/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 70 LTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENL--YRKQWAEHDGLGALILSP 127
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 186 TALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQTKKVSDLA 242
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H T S P L+QH+++TP +L L SFI +
Sbjct: 243 RLSLQDP------EYVAVHETASS-ATPSKLQQHYVITPLPQKLDILWSFIRSNLK---- 291
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E L I LHG Q R ++ F K VL
Sbjct: 292 ---SKTMVFLSSGKQVRFVYESFRH-LQPGIPLMHLHGRQKQGGRLDIVTRFSQSKHCVL 347
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR EG ++LFL PSE + +++
Sbjct: 348 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYEREGRAVLFLDPSEEEGMLK 407
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ IE+I +K Q + +++ M F+ L K L
Sbjct: 408 RLEQKKVPIEKINIKANKQQSIKDQLQ------------------NMCFKDPEL--KYL- 446
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + Y + + IF K++ L FA S L AP +
Sbjct: 447 --GQKAFISYVK--SVYIQKDKEIFKLKELKLDEFAASLGLPGAPRI 489
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 70 LTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENL--YRKQWAEHDGLGALILSP 127
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 186 TALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQT 235
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 17/124 (13%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 194 LQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQTKKVSDLARLSLQDP- 249
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +H T S P L+QH+++TP +L L SFI + SK +V
Sbjct: 250 -----EYVAVHETASS-ATPSKLQQHYVITPLPQKLDILWSFIRSNLK-------SKTMV 296
Query: 315 FMAT 318
F+++
Sbjct: 297 FLSS 300
>gi|119191710|ref|XP_001246461.1| hypothetical protein CIMG_00232 [Coccidioides immitis RS]
gi|118575177|sp|Q1EB31.1|DBP4_COCIM RecName: Full=ATP-dependent RNA helicase DBP4
gi|392864308|gb|EAS34862.2| ATP-dependent RNA helicase DBP4 [Coccidioides immitis RS]
Length = 806
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 249/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q ++ + G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 71 LTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGALILSP 128
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 186
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V LA
Sbjct: 187 TAAFDTAHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKVSDLA 243
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P I +H S P SL+QH++VTP +L L SFI +
Sbjct: 244 RLSLRDPEYIS------VHEAASS-ATPASLQQHYVVTPLPEKLDTLWSFIRNTLK---- 292
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK+LVF ++ + E + I LHG QS R ++ F K L
Sbjct: 293 ---SKILVFFSSSKQVRFVYEAFRH-MQPGIPLLHLHGRQKQSARIDITSKFSRAKYSCL 348
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + +++
Sbjct: 349 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEEGMLK 408
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE I +K Q + +++ M F+ L K L
Sbjct: 409 RLEQKKIPIERINIKAKKQQSIMNQLQ------------------NMCFKDPAL--KYL- 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K +TS+V+ KD + +FN K + L FA S L AP +
Sbjct: 448 --GQKAFTSYVK-SVHIQKD-KDVFNVKSLPLEEFASSLGLPGAPRI 490
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 84/314 (26%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q ++ + G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 71 LTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGALILSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T + ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 187 TAAFDTAHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSA---------- 233
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA-TLTPAVQR 244
T+T K S + L L RD P++ SV +A + TPA
Sbjct: 234 -TQTKKVSDLARLSL------------RD------------PEYISVHEAASSATPA--- 265
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
SL+QH++VTP +L L SFI +
Sbjct: 266 -------------------------------SLQQHYVVTPLPEKLDTLWSFIRNTLK-- 292
Query: 305 NEDEESKMLVFMAT 318
SK+LVF ++
Sbjct: 293 -----SKILVFFSS 301
>gi|344233534|gb|EGV65406.1| hypothetical protein CANTEDRAFT_129665 [Candida tenuis ATCC 10573]
Length = 763
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 264/513 (51%), Gaps = 53/513 (10%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T +Q+ SI L G D++ ++TGSGKTLA+ IP ++ L +R I+ DG+ A+I+
Sbjct: 67 KLTDIQKRSIPYALKGEDIMATAKTGSGKTLAFLIPTMEIL--LRNNITEFDGLAALILS 124
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA+Q E+ K+ + +TGG+ +K EK R+ + ++ILV TPGR+ H
Sbjct: 125 PTRELAVQIFEVLKKIG-AHNQFSAGLVTGGKDVKYEKDRVSR-MNILVGTPGRVAQHLN 182
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
+ ++ S ++ LVLDEADR LD G++ I + L K + Q++L SAT T +V+ L
Sbjct: 183 ESVGMETSNLQVLVLDEADRCLDMGFKSQIDNIVGHLPKTR---QTLLFSATTTDSVKDL 239
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
A ++L NP +I + +DI T PDSL Q++I P + +L L SFI
Sbjct: 240 ARLSLTNPRRIGVSSDSDISAT------PDSLDQYYIKIPLEEKLDVLWSFIKSHLN--- 290
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
SK+LVF ++ + E L I+ KL+G Q+ R E F +
Sbjct: 291 ----SKILVFFSSSKQVQFTYETFRK-LQPGISLLKLYGRHKQTARLETTTKFSQAQHAC 345
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LV 772
L TD+ ARGLD P +DW+VQ P + YVHRVGR AR G EG SLL L+PSE + +
Sbjct: 346 LFATDIVARGLDFPAIDWVVQIDCPEDAATYVHRVGRAARFGREGKSLLMLLPSEEEGFL 405
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
+ L+N +I I+ + +K + + ++ +S Q +
Sbjct: 406 KRLENMKIDIKMMNIK-----------------------QKSKKTIRPQLQSLCFQDPTI 442
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISG--IGKPKN 889
+ + S+ R + Y + + +F +++ +A S L AP + I G K K
Sbjct: 443 KNLGQRAFISYYR--SVYIQKDKDVFKVEELPTETYAASLGLPGAPKIKIKGGASSKEKK 500
Query: 890 KEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
E K + +A E ++ GN K++ + +D
Sbjct: 501 NESRKLQMLAKTDENGDEKEGN---KKVRTRYD 530
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G D++ ++TGSGKTLA+ IP ++ L +R I+ DG+ A+I+
Sbjct: 67 KLTDIQKRSIPYALKGEDIMATAKTGSGKTLAFLIPTMEIL--LRNNITEFDGLAALILS 124
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ + +TGG+ +K EK R+ + ++ILV TPGR+ H
Sbjct: 125 PTRELAVQIFEVLKKIG-AHNQFSAGLVTGGKDVKYEKDRVSR-MNILVGTPGRVAQHLN 182
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ ++ S ++ LVLDEADR LD G++ I + L K + Q++L SAT T
Sbjct: 183 ESVGMETSNLQVLVLDEADRCLDMGFKSQIDNIVGHLPKTR---QTLLFSATTT 233
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 16/138 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G++ I + L K + Q++L SAT T +V+ LA ++
Sbjct: 187 METSNLQVLVLDEADRCLDMGFKSQIDNIVGHLPKTR---QTLLFSATTTDSVKDLARLS 243
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + +DI T PDSL Q++I P + +L L SFI
Sbjct: 244 LTNPRRIGVSSDSDISAT------PDSLDQYYIKIPLEEKLDVLWSFIKSHLN------- 290
Query: 310 SKMLVFMATQDMADYHTE 327
SK+LVF ++ + E
Sbjct: 291 SKILVFFSSSKQVQFTYE 308
>gi|146179425|ref|XP_001020590.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146144568|gb|EAS00345.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 926
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 276/517 (53%), Gaps = 69/517 (13%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
P SY G+ E ++T +Q+ +I IL G DVL S+TGSGKTL+Y +
Sbjct: 89 PISYNTIFGL---------EKRKFIKMTEIQRCTIPHILAGRDVLAASKTGSGKTLSYLV 139
Query: 449 PIIQKL--QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
P++++L Q+ P DG+ A+IILPTRELA Q E+F ++ V + GG+
Sbjct: 140 PLVERLYVQKWNPL----DGLGAIIILPTRELATQVFEVFNSFTQNHDLSV-GLIIGGKN 194
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K EK + KG+++L+ TPGRLL H T + ++ LV+DEAD ILD G++ +
Sbjct: 195 VKYEKEHM-KGMNVLICTPGRLLQHMDETPDFDCTNLQMLVIDEADLILDLGFKEHLNAI 253
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQI--------DAADSTDIHNTT-- 616
L L K + Q+IL SATL+ ++ L+ ++L+N I DS ++ NT+
Sbjct: 254 LLNLPKSR---QTILFSATLSKSIHELSKLSLKNAEHIFLHEVRSTQDQDSQNVINTSIK 310
Query: 617 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 676
D P L Q+++ + +L L SF+ +N K+LVF++T + E
Sbjct: 311 DIYEAPIKLTQYYMEINIEDKLNMLFSFLRSHKKN-------KVLVFLSTCKQVRFVYEA 363
Query: 677 LSTV-LGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQY 735
+ LG + F+LHG Q++R +F TF K GVL T++AARGLD P V+WIVQ
Sbjct: 364 FRRLKLGPPV--FELHGRQKQAKRLAIFFTFAEKKFGVLFTTNLAARGLDFPGVEWIVQV 421
Query: 736 TAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLL 795
P YVHRVGRTAR ++G+SLL ++PSE+K++++L+ +++ I+ KLK ++ L
Sbjct: 422 DCPDDVVTYVHRVGRTARFKNDGNSLLMVLPSEIKMIDKLKEKKMNIQ--KLKANPEHQL 479
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
S+ S +S +++ L A + + S+VR ++ D +
Sbjct: 480 SI---------------------TNSLQSYLVESVDLKYLAQRAFISYVR-SIHFAAD-K 516
Query: 856 HIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKE 891
+FN + L ++S L P + I G+ KN+E
Sbjct: 517 EVFNVNSLDLNGLSESLGLIQTPVINIKGL---KNEE 550
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 119/207 (57%), Gaps = 14/207 (6%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDGIYAVI 62
++T +Q+ +I IL G DVL S+TGSGKTL+Y +P++++L Q+ P DG+ A+I
Sbjct: 105 KMTEIQRCTIPHILAGRDVLAASKTGSGKTLSYLVPLVERLYVQKWNPL----DGLGAII 160
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
ILPTRELA Q E+F ++ V + GG+ +K EK + KG+++L+ TPGRLL H
Sbjct: 161 ILPTRELATQVFEVFNSFTQNHDLSV-GLIIGGKNVKYEKEHM-KGMNVLICTPGRLLQH 218
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
T + ++ LV+DEAD ILD G++ + L L K + Q+IL SATL+ +
Sbjct: 219 MDETPDFDCTNLQMLVIDEADLILDLGFKEHLNAILLNLPKSR---QTILFSATLSKS-- 273
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQ 209
L EH+ L E DQ
Sbjct: 274 -IHELSKLSLKNAEHIFLHEVRSTQDQ 299
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F + ++ LV+DEAD ILD G++ + L L K + Q++L S
Sbjct: 211 TPGRLLQHMDETPDFDCTNLQMLVIDEADLILDLGFKEHLNAILLNLPKSR---QTILFS 267
Query: 236 ATLTPAVQRLAGMTLQNPIQI--------DAADSTDIHNTT--DSLVIPDSLKQHFIVTP 285
ATL+ ++ L+ ++L+N I DS ++ NT+ D P L Q+++
Sbjct: 268 ATLSKSIHELSKLSLKNAEHIFLHEVRSTQDQDSQNVINTSIKDIYEAPIKLTQYYMEIN 327
Query: 286 PKLRLVALASFILGKCQNVNEDEESKMLVFMAT 318
+ +L L SF+ +N K+LVF++T
Sbjct: 328 IEDKLNMLFSFLRSHKKN-------KVLVFLST 353
>gi|380026327|ref|XP_003696903.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Apis florea]
Length = 587
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 262/484 (54%), Gaps = 47/484 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + T +T VQ SI +L G DV + TGSGKT+A+ +P+++ LQ+ + K + I
Sbjct: 20 EELKFTYMTPVQAASIPLLLKGKDVAAEAVTGSGKTIAFLVPLLEILQKRKEKWKPTE-I 78
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+II PTRELA+Q E+ K + + L GG + + R++ G +I+VATPGR
Sbjct: 79 GGIIISPTRELAVQINEVLQKFLNNIPNLKQILLVGGTTIAEDADRLKAGANIIVATPGR 138
Query: 528 L---LDHCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
L L +CK + K +E L+LDEADR+LD G+ + L + + ++ L S
Sbjct: 139 LEDILSNCKIINLAAYIKSLEILILDEADRLLDLGFSTALDTIXSYLPRLR---RTGLFS 195
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T +Q+L L+NP I + +I P +LK +FI+ + + +
Sbjct: 196 ATQTKELQQLIRAGLRNPSLITVKEKPNIST-------PSNLKNNFIIVNTEYKFSTMID 248
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI K N+ K ++F++T DY ++ +L ++ F +HG M +++R ++F
Sbjct: 249 FIQHKGTNL------KYMIFLSTCACVDYFNHIVQAML-PSVQVFAIHGKM-KNKRYKIF 300
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
FR++K+G+LICTDV ARG+D+ VDW++QY P S+++++HR GRTAR+G+EG++LLF
Sbjct: 301 NEFRNIKTGILICTDVMARGIDILEVDWVLQYDPPCSASNFIHRCGRTARIGNEGNALLF 360
Query: 764 LIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L+ +E V+ ++ N+++ I++I L+ + + E L + D LQ
Sbjct: 361 LLETEDAYVDFIKRNQKVEIQQIVLESSI-----ISYEKCLKCMRD---------LQK-- 404
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
Q + L A + + S+++ Y + +L I K I LG A SF L P +
Sbjct: 405 -----QDRFLFDKANRAFVSYIQAYNKHECNL--ILRLKDIDLGKLAMSFGLLRMPRMPE 457
Query: 883 GIGK 886
GK
Sbjct: 458 LXGK 461
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 5/154 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ SI +L G DV + TGSGKT+A+ +P+++ LQ+ + K + I
Sbjct: 22 LKFTYMTPVQAASIPLLLKGKDVAAEAVTGSGKTIAFLVPLLEILQKRKEKWKPTE-IGG 80
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL- 119
+II PTRELA+Q E+ K + + L GG + + R++ G +I+VATPGRL
Sbjct: 81 IIISPTRELAVQINEVLQKFLNNIPNLKQILLVGGTTIAEDADRLKAGANIIVATPGRLE 140
Query: 120 --LDHCKHTETLKFSK-VEHLVLDEADRILDQGY 150
L +CK + K +E L+LDEADR+LD G+
Sbjct: 141 DILSNCKIINLAAYIKSLEILILDEADRLLDLGF 174
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 184 CKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
CK + K +E L+LDEADR+LD G+ + L + + ++ L SAT T +
Sbjct: 146 CKIINLAAYIKSLEILILDEADRLLDLGFSTALDTIXSYLPRLR---RTGLFSATQTKEL 202
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
Q+L L+NP I + +I P +LK +FI+ + + + FI K
Sbjct: 203 QQLIRAGLRNPSLITVKEKPNIST-------PSNLKNNFIIVNTEYKFSTMIDFIQHKGT 255
Query: 303 NVNEDEESKMLVFMATQDMADYHTELL 329
N+ K ++F++T DY ++
Sbjct: 256 NL------KYMIFLSTCACVDYFNHIV 276
>gi|403262859|ref|XP_003923784.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Saimiri boliviensis boliviensis]
Length = 869
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 257/484 (53%), Gaps = 51/484 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F K+ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
+G +LL L+PSE +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKLID-------- 449
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+Q ES + Q + L A + + S++R + Y + +F+ ++ + +A S L
Sbjct: 450 -VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKNKEVFDVSKLPIPEYALSLGLAV 506
Query: 877 APSV 880
AP V
Sbjct: 507 APRV 510
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|70992287|ref|XP_750992.1| DEAD box RNA helicase (Hca4) [Aspergillus fumigatus Af293]
gi|74670609|sp|Q4WM60.1|DBP4_ASPFU RecName: Full=ATP-dependent RNA helicase dbp4
gi|66848625|gb|EAL88954.1| DEAD box RNA helicase (Hca4), putative [Aspergillus fumigatus
Af293]
gi|159124561|gb|EDP49679.1| DEAD box RNA helicase (Hca4), putative [Aspergillus fumigatus
A1163]
Length = 787
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 249/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWAEHDGLGALILSP 127
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 186 TALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQTKKVSDLA 242
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H T S P L+QH+++TP +L L SFI +
Sbjct: 243 RLSLQDP------EYVAVHETASS-ATPSKLQQHYVITPLPQKLDILWSFIRSNLK---- 291
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E L I LHG Q R ++ F K VL
Sbjct: 292 ---SKTMVFLSSGKQVRFVYESFRH-LQPGIPLMHLHGRQKQGGRLDIVTRFSQSKHCVL 347
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR EG ++LFL PSE + +++
Sbjct: 348 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYEREGRAVLFLDPSEEEGMLK 407
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ IE+I +K Q + +++ M F+ L K L
Sbjct: 408 RLEQKKVPIEKINIKANKQQSIKDQLQN------------------MCFKDPEL--KYL- 446
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + Y + + IF K++ L FA S L AP +
Sbjct: 447 --GQKAFISYVK--SVYIQKDKEIFKLKELKLDEFAASLGLPGAPRI 489
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWAEHDGLGALILSP 127
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 186 TALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQT 235
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 17/124 (13%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 194 LQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQTKKVSDLARLSLQDP- 249
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +H T S P L+QH+++TP +L L SFI + SK +V
Sbjct: 250 -----EYVAVHETASS-ATPSKLQQHYVITPLPQKLDILWSFIRSNLK-------SKTMV 296
Query: 315 FMAT 318
F+++
Sbjct: 297 FLSS 300
>gi|392560272|gb|EIW53455.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 791
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 256/497 (51%), Gaps = 55/497 (11%)
Query: 407 NEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
N G+ + ++T +Q SI L G DVL ++TGSGKTLA+ IP ++ L R K
Sbjct: 65 NRGLKRAHFVKMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAFLIPALEIL--YRRKWGP 122
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
+DG+ A+II PTRELA+Q ++ + + + GG+ +K E R+ + ++ILVA
Sbjct: 123 QDGLGALIISPTRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNLKDESERLAR-MNILVA 180
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLL H T + ++ LVLDEADRILD G++R + L L K + Q++L S
Sbjct: 181 TPGRLLQHMDQTIGFECDNLQVLVLDEADRILDMGFQRTLTALLSHLPKSR---QTLLFS 237
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T +V LA ++L++P+ + D T+ T P +L+QH+++ +L L S
Sbjct: 238 ATQTQSVADLARLSLKDPVSV-GIDQTNTEGAT-----PKALEQHYVLCELDKKLDVLWS 291
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI Q +K LVFM++ + E + I LHG Q R E+F
Sbjct: 292 FIKSHLQ-------TKTLVFMSSCKQVRFAFETFCK-MHPGIPLLHLHGKQKQMARLEMF 343
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
K F S+K VL TD+AARGLD P VDW+VQ AP + Y+HRVGRTAR G LL
Sbjct: 344 KRFTSMKHAVLFATDIAARGLDFPSVDWVVQLDAPEDADTYIHRVGRTARYESAGKGLLL 403
Query: 764 LIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
++PSE + +V L+ + I I++IK+K ++ A LQ
Sbjct: 404 MLPSEEEGMVAALKKKNIEIQKIKIKGS-------------------KTQSIANQLQ--- 441
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
Q+ + + + S++R + Y + IF ++ + FA+S L P +
Sbjct: 442 -KLAFQEPEIKYLGQRAFVSYLR--SVYLHKDKSIFKVDELPVKQFAESLGLPGVPKI-- 496
Query: 883 GIGKPKNKEELKNKKMA 899
K +KE K KK A
Sbjct: 497 ---KFLSKELAKKKKNA 510
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 120/223 (53%), Gaps = 23/223 (10%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q SI L G DVL ++TGSGKTLA+ IP ++ L R K +DG+ A+
Sbjct: 72 HFVKMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAFLIPALEIL--YRRKWGPQDGLGAL 129
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q ++ + + + GG+ +K E R+ + ++ILVATPGRLL
Sbjct: 130 IISPTRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNLKDESERLAR-MNILVATPGRLLQ 187
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT--- 178
H T + ++ LVLDEADRILD G++R + L L K + Q++L SAT T
Sbjct: 188 HMDQTIGFECDNLQVLVLDEADRILDMGFQRTLTALLSHLPKSR---QTLLFSATQTQSV 244
Query: 179 ----------PATCWCKHTETLKFSKV---EHLVLDEADRILD 208
P + T T + +H VL E D+ LD
Sbjct: 245 ADLARLSLKDPVSVGIDQTNTEGATPKALEQHYVLCELDKKLD 287
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G++R + L L K + Q++L S
Sbjct: 181 TPGRLLQHMDQTIGFECDNLQVLVLDEADRILDMGFQRTLTALLSHLPKSR---QTLLFS 237
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L++P+ + D T+ T P +L+QH+++ +L L S
Sbjct: 238 ATQTQSVADLARLSLKDPVSV-GIDQTNTEGAT-----PKALEQHYVLCELDKKLDVLWS 291
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q +K LVFM++
Sbjct: 292 FIKSHLQ-------TKTLVFMSS 307
>gi|330803992|ref|XP_003289984.1| hypothetical protein DICPUDRAFT_154460 [Dictyostelium purpureum]
gi|325079932|gb|EGC33510.1| hypothetical protein DICPUDRAFT_154460 [Dictyostelium purpureum]
Length = 915
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 182/288 (63%), Gaps = 20/288 (6%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
+NL M + + T +Q+ SI IL G D LV++QTGSGKTLAY IP++QKL E R +SR
Sbjct: 235 RNLQGHMKLVKPTHIQEASIPTILKGSDALVKAQTGSGKTLAYLIPVVQKLTEQR--VSR 292
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG Y V+I PTRELALQ + KL K F WIVP + GGE +EKARIRKGI+ILVA
Sbjct: 293 ADGCYCVVISPTRELALQIFDELQKLLKPFYWIVPGLIMGGENRSAEKARIRKGINILVA 352
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF----QS 579
TPGRLLDH ++T+T ++ +LDEAD++LD G+E+DI + IL ++K Q+
Sbjct: 353 TPGRLLDHLQNTKTFPTHNIKWCILDEADKLLDLGFEKDITTIINILDEKKKSNGVPRQN 412
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQI-------DAADSTDIHNTTDSLVIPDSLKQHFIVT 632
+L+SATL+ + RLA ++L+NP+ I ++ ++ + L+ P L Q+F+
Sbjct: 413 VLVSATLSDGISRLASISLKNPVYIGLDQRALESGENPFDAAMKEELLAPKQLDQYFVEV 472
Query: 633 PPKLRLVALASFILGKCQNVNED-------EESKMLVFMATQDMADYH 673
K RL +L SFI K N+N D E+ KM+VF ++ D D+H
Sbjct: 473 ESKERLTSLVSFIRWKTSNINTDGSKSVNNEQQKMIVFFSSCDSVDFH 520
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 180/336 (53%), Gaps = 67/336 (19%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M + + T +Q+ SI IL G D LV++QTGSGKTLAY IP++QKL E R +SR DG Y
Sbjct: 241 MKLVKPTHIQEASIPTILKGSDALVKAQTGSGKTLAYLIPVVQKLTEQR--VSRADGCYC 298
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+I PTRELALQ + KL K F WIVP + GGE +EKARIRKGI+ILVATPGRLL
Sbjct: 299 VVISPTRELALQIFDELQKLLKPFYWIVPGLIMGGENRSAEKARIRKGINILVATPGRLL 358
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF----QSILLSAT 176
DH ++T+T ++ +LDEAD++LD G+E+DI + IL ++K Q++L+SAT
Sbjct: 359 DHLQNTKTFPTHNIKWCILDEADKLLDLGFEKDITTIINILDEKKKSNGVPRQNVLVSAT 418
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
L+ ++ ++ LD+ R L+ G
Sbjct: 419 LSDGIS---RLASISLKNPVYIGLDQ--RALESG-------------------------- 447
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
+NP DAA + L+ P L Q+F+ K RL +L SF
Sbjct: 448 --------------ENP--FDAA-------MKEELLAPKQLDQYFVEVESKERLTSLVSF 484
Query: 297 ILGKCQNVNED-------EESKMLVFMATQDMADYH 325
I K N+N D E+ KM+VF ++ D D+H
Sbjct: 485 IRWKTSNINTDGSKSVNNEQQKMIVFFSSCDSVDFH 520
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 144/238 (60%), Gaps = 10/238 (4%)
Query: 685 IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDY 744
+ FKLHG + Q RT+ F F++ +G+L+ TDV+ARGLDLP V WIVQY S + DY
Sbjct: 611 VPVFKLHGELDQQTRTKTFFDFKNSSNGILLTTDVSARGLDLPSVSWIVQYDPCSDTKDY 670
Query: 745 VHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
+HR+GRTAR+G+ GSSLLFL+PSE K ++ L+N +++I E+K+ LQ+L EG L
Sbjct: 671 IHRIGRTARLGNAGSSLLFLLPSEKKYIQHLENYKLQIREMKVTSILQSLFYTS-EGQLK 729
Query: 805 RLADGN-VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQI 863
+ + + +E+ LQ+ FE ++ A Y S +R YA++ D++ IF+ +
Sbjct: 730 KNSKASQLESIVHDLQLLFERFLIYDSKAKELARCAYQSSLRAYATHKGDVKSIFHISHL 789
Query: 864 HLGHFAKSFALRDAPSV-------ISGIGKPKNKEELKNKKMAIN-KEKSFKQRGNFS 913
HLGH +KSFALR+ P+ I G K +E +K I+ K KS+K FS
Sbjct: 790 HLGHVSKSFALRETPTELNKMSAGIKGAKAAKKGDESTLQKQTIDFKMKSYKSVNEFS 847
>gi|320036344|gb|EFW18283.1| ATP-dependent RNA helicase dbp4 [Coccidioides posadasii str.
Silveira]
Length = 805
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 248/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q ++ + G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 71 LTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGALILSP 128
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 186
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V LA
Sbjct: 187 TAAFDTDHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKVSDLA 243
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P I +H S P SL+QH++VTP +L L SFI +
Sbjct: 244 RLSLRDPEYIS------VHEAASS-ATPASLQQHYVVTPLPEKLDTLWSFIRNTLK---- 292
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK+LVF ++ + E + I LHG QS R ++ F K L
Sbjct: 293 ---SKILVFFSSSKQVRFVYEAFRH-MQPGIPLLHLHGRQKQSARIDITSKFSRAKYSCL 348
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + +++
Sbjct: 349 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEEGMLK 408
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE I +K Q + +++ M F+ L K L
Sbjct: 409 RLEQKKIPIERINIKAKKQQSIVNQLQ------------------NMCFKDPAL--KYL- 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K +TS+V+ KD + +FN K + L FA S L AP +
Sbjct: 448 --GQKAFTSYVK-SVHIQKD-KDVFNVKSLPLEEFASSLGLPGAPRI 490
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 84/314 (26%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q ++ + G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 71 LTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGALILSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 187 TAAFDTDHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSA---------- 233
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA-TLTPAVQR 244
T+T K S + L L RD P++ SV +A + TPA
Sbjct: 234 -TQTKKVSDLARLSL------------RD------------PEYISVHEAASSATPA--- 265
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
SL+QH++VTP +L L SFI +
Sbjct: 266 -------------------------------SLQQHYVVTPLPEKLDTLWSFIRNTLK-- 292
Query: 305 NEDEESKMLVFMAT 318
SK+LVF ++
Sbjct: 293 -----SKILVFFSS 301
>gi|21627812|emb|CAD37144.1| probable ATP-dependent RNA helicase [Aspergillus fumigatus]
Length = 750
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 249/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWAEHDGLGALILSP 127
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 186 TALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQTKKVSDLA 242
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H T S P L+QH+++TP +L L SFI +
Sbjct: 243 RLSLQDP------EYVAVHETASS-ATPSKLQQHYVITPLPQKLDILWSFIRSNLK---- 291
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E L I LHG Q R ++ F K VL
Sbjct: 292 ---SKTMVFLSSGKQVRFVYESFRH-LQPGIPLMHLHGRQKQGGRLDIVTRFSQSKHCVL 347
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR EG ++LFL PSE + +++
Sbjct: 348 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYEREGRAVLFLDPSEEEGMLK 407
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ IE+I +K Q + +++ M F+ L K L
Sbjct: 408 RLEQKKVPIEKINIKANKQQSIKDQLQN------------------MCFKDPEL--KYL- 446
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + Y + + IF K++ L FA S L AP +
Sbjct: 447 --GQKAFISYVK--SVYIQKDKEIFKLKELKLDEFAASLGLPGAPRI 489
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 70 LTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWAEHDGLGALILSP 127
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 128 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 185
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 186 TALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQT 235
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 17/124 (13%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 194 LQMLVLDEADRILDLGFQQTVDAIIGHLPKER---QTLLFSATQTKKVSDLARLSLQDP- 249
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +H T S P L+QH+++TP +L L SFI + SK +V
Sbjct: 250 -----EYVAVHETASS-ATPSKLQQHYVITPLPQKLDILWSFIRSNLK-------SKTMV 296
Query: 315 FMAT 318
F+++
Sbjct: 297 FLSS 300
>gi|303313405|ref|XP_003066714.1| ATP-dependent RNA helicase DBP4, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106376|gb|EER24569.1| ATP-dependent RNA helicase DBP4, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 805
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 248/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q ++ + G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 71 LTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGALILSP 128
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 186
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V LA
Sbjct: 187 TAAFDTDHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKVSDLA 243
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P I +H S P SL+QH++VTP +L L SFI +
Sbjct: 244 RLSLRDPEYIS------VHEAASS-ATPASLQQHYVVTPLPEKLDTLWSFIRNTLK---- 292
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK+LVF ++ + E + I LHG QS R ++ F K L
Sbjct: 293 ---SKILVFFSSSKQVRFVYEAFRH-MQPGIPLLHLHGRQKQSARIDITSKFSRAKYSCL 348
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + +++
Sbjct: 349 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEEGMLK 408
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE I +K Q + +++ M F+ L K L
Sbjct: 409 RLEQKKIPIERINIKAKKQQSIVNQLQ------------------NMCFKDPAL--KYL- 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K +TS+V+ KD + +FN K + L FA S L AP +
Sbjct: 448 --GQKAFTSYVK-SVHIQKD-KDVFNVKSLPLEEFASSLGLPGAPRI 490
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 152/314 (48%), Gaps = 84/314 (26%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q ++ + G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 71 LTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGALILSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 129 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 187 TAAFDTDHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSA---------- 233
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA-TLTPAVQR 244
T+T K S + L L RD P++ SV +A + TPA
Sbjct: 234 -TQTKKVSDLARLSL------------RD------------PEYISVHEAASSATPA--- 265
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
SL+QH++VTP +L L SFI +
Sbjct: 266 -------------------------------SLQQHYVVTPLPEKLDTLWSFIRNTLK-- 292
Query: 305 NEDEESKMLVFMAT 318
SK+LVF ++
Sbjct: 293 -----SKILVFFSS 301
>gi|302665680|ref|XP_003024449.1| hypothetical protein TRV_01412 [Trichophyton verrucosum HKI 0517]
gi|291188502|gb|EFE43838.1| hypothetical protein TRV_01412 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 251/471 (53%), Gaps = 48/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGAL 126
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V
Sbjct: 185 HMDQTAAFDTGNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKV 241
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++LQ+P I +H T S P +L+QH++VTP +L L SFI +
Sbjct: 242 SDLARLSLQDPEYIS------VHQTASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSLK 294
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF ++ + E + I LHG Q R ++ F + K
Sbjct: 295 -------SKIIVFFSSSKEVRFVYEAFRQ-MQPGIPLLHLHGRQKQGARLDITHKFSASK 346
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EV 769
+ L TDV ARGLD P VDW++Q P S Y+HRVGRTAR G ++LFL PS E+
Sbjct: 347 NSCLFATDVVARGLDFPAVDWVIQLDCPEDSDTYIHRVGRTARYERNGRAVLFLDPSEEI 406
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++ L+ ++I IE+I ++ Q + +++ M F+ L
Sbjct: 407 GMLSRLEQKKIPIEKINIRANKQQSIKHQLQ------------------NMCFKDPQL-- 446
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K L K +TS+V+ + + + + +F+ K + L +A S L AP +
Sbjct: 447 KYL---GQKAFTSYVK--SIHIQKDKEVFDVKALPLEEYAASLGLPGAPRI 492
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 151/317 (47%), Gaps = 82/317 (25%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--YRKQWTEYDGLGAL 126
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 185 HMDQTAAFDTGNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSA------ 235
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
T+T K S + L L Q P++ SV
Sbjct: 236 -----TQTKKVSDLARLSL------------------------QDPEYISV--------- 257
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
H T S P +L+QH++VTP +L L SFI
Sbjct: 258 -----------------------HQTASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSL 293
Query: 302 QNVNEDEESKMLVFMAT 318
+ SK++VF ++
Sbjct: 294 K-------SKIIVFFSS 303
>gi|406607754|emb|CCH40859.1| DEAD box RNA helicase (Hca4), putative [Wickerhamomyces ciferrii]
Length = 746
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 258/483 (53%), Gaps = 51/483 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ SI L G D+L ++TGSGKTLA+ IP+I+KL R K + DG+ A+II P
Sbjct: 64 LTDIQKESIPSALKGDDILGAARTGSGKTLAFLIPVIEKL--YRAKWTELDGLGALIISP 121
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + ++ + GG+ +K E R+ K I+IL+ TPGR+L H
Sbjct: 122 TRELAIQIYEVLVKIGRHNSFSA-GLVIGGKDVKFEMERLSK-INILIGTPGRILQHLDQ 179
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + + ++ LVLDEADRILD G+++ + + + L P Q++L SAT + ++ LA
Sbjct: 180 TVGMDTNNLQMLVLDEADRILDMGFKKTLDDIVSNLP---PTRQTLLFSATQSKSISDLA 236
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L NP I + T D + P+SL+Q +I + +L L SFI +
Sbjct: 237 RLSLTNPKYIG------VKETDDQIATPESLQQSYITVNLEEKLDTLFSFIKTHLK---- 286
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+K+LVF++T Y E T + ++ +LHG Q+ RTE F + L
Sbjct: 287 ---AKILVFLSTSKQVHYVYETFRT-MQPGVSLMQLHGRQKQTARTETVYKFSKAQHVCL 342
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P +DW++Q AP + Y+HRVGR AR G G SLL + PSE + +++
Sbjct: 343 FATDVVARGIDFPSIDWVIQVDAPEDADTYIHRVGRAARFGKTGKSLLMVTPSEEEGMLK 402
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L++++I + N L++K + +++ ++ + L
Sbjct: 403 RLESKKI----------IPNKLNIK-------------QAKKRSIRSQMQALCFKDPELK 439
Query: 834 TSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEE 892
K + S+V+ Y KD +F +++ + +AKS L AP I G KNK E
Sbjct: 440 YLGQKAFISYVKSIYIQKDKD---VFKPEELPVEEYAKSLGLPGAPK-IKIKGGTKNK-E 494
Query: 893 LKN 895
LKN
Sbjct: 495 LKN 497
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ SI L G D+L ++TGSGKTLA+ IP+I+KL R K + DG+ A+II P
Sbjct: 64 LTDIQKESIPSALKGDDILGAARTGSGKTLAFLIPVIEKL--YRAKWTELDGLGALIISP 121
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + ++ + GG+ +K E R+ K I+IL+ TPGR+L H
Sbjct: 122 TRELAIQIYEVLVKIGRHNSFSA-GLVIGGKDVKFEMERLSK-INILIGTPGRILQHLDQ 179
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + + ++ LVLDEADRILD G+++ + + + L P Q++L SAT
Sbjct: 180 TVGMDTNNLQMLVLDEADRILDMGFKKTLDDIVSNL---PPTRQTLLFSAT 227
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 16/139 (11%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
+ ++ LVLDEADRILD G+++ + + + L P Q++L SAT + ++ LA ++L N
Sbjct: 186 NNLQMLVLDEADRILDMGFKKTLDDIVSNL---PPTRQTLLFSATQSKSISDLARLSLTN 242
Query: 253 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKM 312
P I + T D + P+SL+Q +I + +L L SFI + +K+
Sbjct: 243 PKYI------GVKETDDQIATPESLQQSYITVNLEEKLDTLFSFIKTHLK-------AKI 289
Query: 313 LVFMATQDMADYHTELLST 331
LVF++T Y E T
Sbjct: 290 LVFLSTSKQVHYVYETFRT 308
>gi|426370364|ref|XP_004052135.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Gorilla
gorilla gorilla]
Length = 846
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 261/494 (52%), Gaps = 55/494 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 43 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 97
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 98 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 154
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ +
Sbjct: 155 LKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAV 213
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 214 IENLPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 263
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV K ++ L SF+ + K +VF ++ Y + L ++
Sbjct: 264 QNYIVCELKQKISVLYSFLRSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGVS 315
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 316 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 375
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR +G +LL L+PSE +V++L +++ ++EIK+ + +L
Sbjct: 376 RAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKL 421
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
D +Q ES + Q + L A + + S+VR + Y + +F+ ++ +
Sbjct: 422 ID---------VQKKLESILAQDQDLKERAQRCFVSYVR--SVYLMKDKEVFDVSKLPIP 470
Query: 867 HFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 471 EYALSLGLAVAPRI 484
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 66 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 123
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 124 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 181
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 182 TVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQTKS 233
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 171 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 227
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV K ++ L S
Sbjct: 228 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELKQKISVLYS 280
Query: 296 FI 297
F+
Sbjct: 281 FL 282
>gi|169773163|ref|XP_001821050.1| ATP-dependent RNA helicase dbp4 [Aspergillus oryzae RIB40]
gi|238491114|ref|XP_002376794.1| DEAD box RNA helicase (Hca4), putative [Aspergillus flavus
NRRL3357]
gi|91206545|sp|Q2UHB7.1|DBP4_ASPOR RecName: Full=ATP-dependent RNA helicase dbp4
gi|83768911|dbj|BAE59048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697207|gb|EED53548.1| DEAD box RNA helicase (Hca4), putative [Aspergillus flavus
NRRL3357]
Length = 796
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 270/522 (51%), Gaps = 57/522 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ IP+++ L R + S DG+ A+I+ P
Sbjct: 68 LTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKQWSEHDGLGALILSP 125
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 126 TRELAIQIFEVLRKIGRYHTFSA-GLIIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 183
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 184 TAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKER---QTLLFSATQTKKVSDLA 240
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H T S P +L+QH++VTP +L L SFI +
Sbjct: 241 RLSLQDP------EYVAVHETASS-ATPSTLQQHYVVTPLSQKLDVLWSFIRSNLK---- 289
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+K +VF+++ + E L I LHG Q R ++ F K VL
Sbjct: 290 ---AKTIVFLSSGKQVRFVYESFRH-LQPGIPLMHLHGRQKQGGRLDITAKFSQAKHAVL 345
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+ ARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PS E +++
Sbjct: 346 FSTDITARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEESGMLK 405
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ IE I +K Q + +++ M F+ L K L
Sbjct: 406 RLEQKKVPIERINIKANKQQSIRDQLQ------------------NMCFKDPEL--KYL- 444
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S+V+ + Y + + +F K++ L FA S L AP + K + +E
Sbjct: 445 --GQKAFISYVK--SVYVQKDKEVFKLKELKLEDFASSLGLPGAPRI--KFIKGDDTKER 498
Query: 894 KNKKMAI-------NKEKSFKQRGNFSKKQMLSEFDSGLPQR 928
KN A + ++ +++ +KQ+ +++D +R
Sbjct: 499 KNASRATAYLSSDDDSDEGGEKKSKKDEKQVRTKYDRMFERR 540
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ IP+++ L R + S DG+ A+I+ P
Sbjct: 68 LTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKQWSEHDGLGALILSP 125
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 126 TRELAIQIFEVLRKIGRYHTFSA-GLIIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 183
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 184 TAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKER---QTLLFSATQT 233
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 17/124 (13%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 192 LQMLVLDEADRILDMGFQKTVDAIVGHLPKER---QTLLFSATQTKKVSDLARLSLQDP- 247
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +H T S P +L+QH++VTP +L L SFI + +K +V
Sbjct: 248 -----EYVAVHETASS-ATPSTLQQHYVVTPLSQKLDVLWSFIRSNLK-------AKTIV 294
Query: 315 FMAT 318
F+++
Sbjct: 295 FLSS 298
>gi|391865882|gb|EIT75161.1| RNA Helicase [Aspergillus oryzae 3.042]
Length = 796
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 270/522 (51%), Gaps = 57/522 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ IP+++ L R + S DG+ A+I+ P
Sbjct: 68 LTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKQWSEHDGLGALILSP 125
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 126 TRELAIQIFEVLRKIGRYHTFSA-GLIIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 183
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA
Sbjct: 184 TAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKER---QTLLFSATQTKKVSDLA 240
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H T S P +L+QH++VTP +L L SFI +
Sbjct: 241 RLSLQDP------EYVAVHETASS-ATPSTLQQHYVVTPLSQKLDVLWSFIRSNLK---- 289
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+K +VF+++ + E L I LHG Q R ++ F K VL
Sbjct: 290 ---AKTIVFLSSGKQVRFVYESFRH-LQPGIPLMHLHGRQKQGGRLDITAKFSQAKHAVL 345
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+ ARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PS E +++
Sbjct: 346 FSTDITARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEESGMLK 405
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ IE I +K Q + +++ M F+ L K L
Sbjct: 406 RLEQKKVPIERINIKANKQQSIKDQLQ------------------NMCFKDPEL--KYL- 444
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S+V+ + Y + + +F K++ L FA S L AP + K + +E
Sbjct: 445 --GQKAFISYVK--SVYVQKDKEVFKLKELKLEDFASSLGLPGAPRI--KFIKGDDTKER 498
Query: 894 KNKKMAI-------NKEKSFKQRGNFSKKQMLSEFDSGLPQR 928
KN A + ++ +++ +KQ+ +++D +R
Sbjct: 499 KNASRATAYLSSDDDSDEGGEKKSKKDEKQVRTKYDRMFERR 540
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ IP+++ L R + S DG+ A+I+ P
Sbjct: 68 LTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKQWSEHDGLGALILSP 125
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ +K E+ R+ + ++ILV TPGR+L H
Sbjct: 126 TRELAIQIFEVLRKIGRYHTFSA-GLIIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQ 183
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 184 TAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKER---QTLLFSATQT 233
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 17/124 (13%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 192 LQMLVLDEADRILDMGFQKTVDAIVGHLPKER---QTLLFSATQTKKVSDLARLSLQDP- 247
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +H T S P +L+QH++VTP +L L SFI + +K +V
Sbjct: 248 -----EYVAVHETASS-ATPSTLQQHYVVTPLSQKLDVLWSFIRSNLK-------AKTIV 294
Query: 315 FMAT 318
F+++
Sbjct: 295 FLSS 298
>gi|393244370|gb|EJD51882.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 775
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 256/498 (51%), Gaps = 52/498 (10%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
KK L + T+ T +Q SI P L G DVL ++TGSGKTLA+ IP+++ L R K
Sbjct: 62 KKGLKKAF-FTKPTDIQAKSIPPALKGRDVLGAARTGSGKTLAFLIPLLELL--YRRKWG 118
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
+DG+ A++I PTRELA+Q E+ + + + GG+ +K E+ R+ + ++ILV
Sbjct: 119 PQDGLGALVISPTRELAMQIFEVL-RAIGGYHSFSAGLVIGGKNLKDERDRLAR-MNILV 176
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
ATPGRLL H T + ++ LVLDEADRILD G+ + + + L K + Q++L
Sbjct: 177 ATPGRLLQHMDQTVGFEGDNLQMLVLDEADRILDMGFTKSLNAIVAHLPKSR---QTLLF 233
Query: 583 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
SAT T +V+ LA ++L++P + ++ D T P +L+QH+IV +L L
Sbjct: 234 SATQTTSVKDLARLSLKDPEYVGVQEA-DFDGAT-----PRNLEQHYIVVDLDRKLDVLY 287
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SFI KMLVFM+ + E L I LHG Q +R E+
Sbjct: 288 SFIRTHLT-------CKMLVFMSCCKQVRFVFETFCK-LHPGIPLLHLHGKQKQIKRLEI 339
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F+ F S K+ VL TD+AARGLD P VDW+VQ AP + Y+HRVGRTAR G +LL
Sbjct: 340 FQKFTSSKNSVLFATDIAARGLDFPAVDWVVQVDAPEDAETYIHRVGRTARYQSAGHALL 399
Query: 763 FLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L PSE ++ L+ + I +E IK+K E+ ++
Sbjct: 400 MLCPSEEDGMLAALKKKSITVESIKIK-----------------------ESKIQSITNQ 436
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
+S Q + + + S++R + Y + + IF ++ FA S L AP
Sbjct: 437 LQSFAFQDPEIKYLGQRAFVSYMR--SVYLQKDKDIFMVAELPAEKFAASLGLPGAPK-- 492
Query: 882 SGIGKPKNKEELKNKKMA 899
I K+ +E KN ++A
Sbjct: 493 --IKFLKSAKEKKNAQLA 508
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 16/215 (7%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T+ T +Q SI P L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A++
Sbjct: 70 FTKPTDIQAKSIPPALKGRDVLGAARTGSGKTLAFLIPLLELL--YRRKWGPQDGLGALV 127
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ + + + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 128 ISPTRELAMQIFEVL-RAIGGYHSFSAGLVIGGKNLKDERDRLAR-MNILVATPGRLLQH 185
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
T + ++ LVLDEADRILD G+ + + + L K + Q++L SAT T
Sbjct: 186 MDQTVGFEGDNLQMLVLDEADRILDMGFTKSLNAIVAHLPKSR---QTLLFSAT---QTT 239
Query: 183 WCKHTETLKFSKVEHLVLDEAD------RILDQGY 211
K L E++ + EAD R L+Q Y
Sbjct: 240 SVKDLARLSLKDPEYVGVQEADFDGATPRNLEQHY 274
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G+ + + + L K + Q++L S
Sbjct: 178 TPGRLLQHMDQTVGFEGDNLQMLVLDEADRILDMGFTKSLNAIVAHLPKSR---QTLLFS 234
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + D T P +L+QH+IV +L L S
Sbjct: 235 ATQTTSVKDLARLSLKDPEYV-GVQEADFDGAT-----PRNLEQHYIVVDLDRKLDVLYS 288
Query: 296 FILGKCQNVNEDEESKMLVFMA 317
FI KMLVFM+
Sbjct: 289 FIRTHLT-------CKMLVFMS 303
>gi|242033287|ref|XP_002464038.1| hypothetical protein SORBIDRAFT_01g011090 [Sorghum bicolor]
gi|241917892|gb|EER91036.1| hypothetical protein SORBIDRAFT_01g011090 [Sorghum bicolor]
Length = 572
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/488 (33%), Positives = 260/488 (53%), Gaps = 70/488 (14%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI +++G DV+ ++TGSGKTLA+ IP I+ L R ++G
Sbjct: 93 MNYTHLTKIQARSIPHLMEGSDVMGSAKTGSGKTLAFLIPAIELLH--RSHFLPRNGTGV 150
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELA+QT + +L K + + ++ GG M+SE ++ +GI++LVATPG LL
Sbjct: 151 VVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGTNMRSEANQLAEGINVLVATPGMLL 209
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH + T + K+ +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT T
Sbjct: 210 DHLRSTSSFKYKELKCLIIDEADRILEQNFEEDMKQIFKRLPRDR---QTVLFSATQTQK 266
Query: 590 VQRLAGMTL------QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
VQ A T Q + D +++ T + L+Q + V P + R + L +
Sbjct: 267 VQDFANFTFGKNEERQRKLVYVGVDDSELKPTV------EGLQQAYCVIPSEKRFLVLYT 320
Query: 644 FILGKCQ----------NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGS 693
F+ K V E+++ K++VF ++ +H ELL+ LG I +++HG
Sbjct: 321 FLRLKVHKEQMVEVLRGEVGEEQKVKIMVFFSSCSSVKFHAELLN-FLG--IECYEIHGQ 377
Query: 694 MSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR 753
+ Q +RT F F + G+L+C +VAARGLD+P V DY+HRVGRTAR
Sbjct: 378 LKQQKRTSTFFRFLKEEKGILLCPNVAARGLDIPDV-------------DYIHRVGRTAR 424
Query: 754 VGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVE 812
+G +LLFL+P E+KL+ LQ I + E ++ + LS+L
Sbjct: 425 GDKGKGKALLFLLPEELKLLIHLQAANICLTEYVFRE-------KHVPKSLSQL------ 471
Query: 813 TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSF 872
E+ V L+ SA + Y S++ Y S+S ++ IF+ Q+ L A SF
Sbjct: 472 ----------ENIVTGNYFLNKSAKEAYRSYLLAYNSHS--MKDIFDIHQLDLKKVAASF 519
Query: 873 ALRDAPSV 880
++ P V
Sbjct: 520 CFKEPPKV 527
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 163/340 (47%), Gaps = 77/340 (22%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI +++G DV+ ++TGSGKTLA+ IP I+ L R ++G
Sbjct: 93 MNYTHLTKIQARSIPHLMEGSDVMGSAKTGSGKTLAFLIPAIELLH--RSHFLPRNGTGV 150
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELA+QT + +L K + + ++ GG M+SE ++ +GI++LVATPG LL
Sbjct: 151 VVVCPTRELAIQTHNVAKELMKYHSQTL-GYVIGGTNMRSEANQLAEGINVLVATPGMLL 209
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH + T + K+ +++ L++DEADRIL+Q +E D+ + + L + + Q++L SAT T
Sbjct: 210 DHLRSTSSFKYKELKCLIIDEADRILEQNFEEDMKQIFKRLPRDR---QTVLFSATQTQK 266
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
V D A+ + ER
Sbjct: 267 ------------------VQDFANFTFGKNEER--------------------------- 281
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
Q + D +++ T + L +Q + V P + R + L +F+ K
Sbjct: 282 ----------QRKLVYVGVDDSELKPTVEGL------QQAYCVIPSEKRFLVLYTFLRLK 325
Query: 301 CQ----------NVNEDEESKMLVFMATQDMADYHTELLS 330
V E+++ K++VF ++ +H ELL+
Sbjct: 326 VHKEQMVEVLRGEVGEEQKVKIMVFFSSCSSVKFHAELLN 365
>gi|407926604|gb|EKG19571.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 833
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 261/488 (53%), Gaps = 52/488 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD-GIYA 469
+ +T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + D G+ A
Sbjct: 67 HFAAMTDIQTRAIPLALKGADILGAAKTGSGKTLAFVVPVLENL--YRSQCVGPDAGLGA 124
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK-ARIRKGISILVATPGRL 528
+II PTRELA+Q E+ + K + GG+ ++ E+ A +R ++I+V TPGR+
Sbjct: 125 MIISPTRELAIQIFEVLYNIGKKGHLFSAGLVIGGKSLQEERDALVR--MNIVVCTPGRM 182
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
L H T ++ LVLDEADRILD G++RD+ ++ L KQ+ Q++L SAT T
Sbjct: 183 LQHLSQTVGFFVDNLQMLVLDEADRILDMGFQRDLDAIIDYLPKQR---QTLLFSATQTK 239
Query: 589 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V LA ++LQ+P + +H + ++ P SL+Q++++TP +L L SFI
Sbjct: 240 KVSDLARLSLQDP------EYVSVHESAET-ATPKSLQQNYVITPLSEKLDTLWSFI--- 289
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++SK++VF+++ + E + I LHG Q+ R ++ K F +
Sbjct: 290 ----QASKKSKIIVFLSSGKQVRFVYESFRH-MQPGIPLLHLHGRQKQTARLDITKKFSA 344
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
K L TDVAARGLD P VDW+VQ P + Y+HRVGRTAR +G ++LFL PSE
Sbjct: 345 AKQSCLFATDVAARGLDFPAVDWVVQVDCPEDADTYIHRVGRTARYERDGRAVLFLDPSE 404
Query: 769 VK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
+ +++ L+ R+I IE I ++ Q + +++ M F+ A L
Sbjct: 405 EEGMLKRLEARKIPIERINVRTKKQQSIKNQLQ------------------NMCFKDAQL 446
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
K L K + S+V+ + + + + IF +++ L FA S L AP + K
Sbjct: 447 --KYL---GQKAFISYVK--SIHVQKDKEIFQLQKLPLEEFAASLGLPGAPRI--KFMKG 497
Query: 888 KNKEELKN 895
N +ELKN
Sbjct: 498 DNAKELKN 505
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD-GIYA 60
+ +T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + D G+ A
Sbjct: 67 HFAAMTDIQTRAIPLALKGADILGAAKTGSGKTLAFVVPVLENL--YRSQCVGPDAGLGA 124
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK-ARIRKGISILVATPGRL 119
+II PTRELA+Q E+ + K + GG+ ++ E+ A +R ++I+V TPGR+
Sbjct: 125 MIISPTRELAIQIFEVLYNIGKKGHLFSAGLVIGGKSLQEERDALVR--MNIVVCTPGRM 182
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L H T ++ LVLDEADRILD G++RD+ ++ L KQ+ Q++L SAT T
Sbjct: 183 LQHLSQTVGFFVDNLQMLVLDEADRILDMGFQRDLDAIIDYLPKQR---QTLLFSATQT 238
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 83/143 (58%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T+ F ++ LVLDEADRILD G++RD+ ++ L KQ+ Q++L S
Sbjct: 178 TPGRMLQHLSQTVGFFVDNLQMLVLDEADRILDMGFQRDLDAIIDYLPKQR---QTLLFS 234
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++LQ+P + +H + ++ P SL+Q++++TP +L L S
Sbjct: 235 ATQTKKVSDLARLSLQDP------EYVSVHESAET-ATPKSLQQNYVITPLSEKLDTLWS 287
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI ++SK++VF+++
Sbjct: 288 FI-------QASKKSKIIVFLSS 303
>gi|327276052|ref|XP_003222785.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Anolis carolinensis]
Length = 597
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 259/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+ P +++ L E M +T VQ +I + DV + TGSGKTLA+ IPII+ L
Sbjct: 16 LSPGVRRALRE-MGFPHMTPVQSATIPLFMANKDVAAEAVTGSGKTLAFVIPIIEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKLKKKQ-VGAIVITPTRELAIQIDEVISHFTKHFPQFSQCLFIGGNNPMEDVERFKEH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +ILVATPGRL D + +E L + ++ LVLDEADR+LD G+E + L+IL
Sbjct: 134 GGNILVATPGRLEDMFRRKSEGLDLASSVRSLDILVLDEADRLLDMGFEASLNTILDILP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + + T P L+ +++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKDMAASNTQK--TPTRLQNFYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + + K LVF +T +Y+ + L +++ N+ +H
Sbjct: 249 CKADEKFNQLVHFL-------RQHKPEKHLVFFSTCACVEYYGKALESLI-RNVQIMCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR + SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KHKRNKIFMEFRKLSSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+KL+ + ++L
Sbjct: 360 ARIGHLGSALVFLLPMEEAYINFLAINQKCPMQEMKLQSNVMDVLP-------------- 405
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+S L + ++ K + S+V+ YA + +L IF K + A+
Sbjct: 406 ----------KLKSLSLADRAVYEKGMKAFVSYVQAYAKHECNL--IFRLKDLDFSSLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLKMPRMPELKGK 469
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 141/332 (42%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I + DV + TGSGKTLA+ IPII+ L K+ +K + A
Sbjct: 27 MGFPHMTPVQSATIPLFMANKDVAAEAVTGSGKTLAFVIPIIEILLRREEKLKKKQ-VGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +ILVATPGRL
Sbjct: 86 IVITPTRELAIQIDEVISHFTKHFPQFSQCLFIGGNNPMEDVERFKEHGGNILVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L + R LD
Sbjct: 146 EDMFRR-------KSEGLDLASSVRSLDI------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E + L+IL KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASLNTILDILPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + + T P L+ +++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKDMAASNTQK--TPTRLQNFYMICKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+ + K LVF +T +Y+ + L +
Sbjct: 263 -----RQHKPEKHLVFFSTCACVEYYGKALES 289
>gi|389746269|gb|EIM87449.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 817
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 251/473 (53%), Gaps = 47/473 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A+II P
Sbjct: 76 MTDIQAKSLPVSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPQDGLGALIISP 133
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ + ++ + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 134 TRELAVQIFEVLRSIGGYHSFSA-GLVIGGKNLKDERDRLSR-MNILVATPGRLLQHMDQ 191
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRILD G+ R + L L K + Q++L SAT T +V LA
Sbjct: 192 TVGFESDNLQLLVLDEADRILDMGFSRTLTALLSHLPKSR---QTLLFSATQTKSVADLA 248
Query: 595 GMTLQNPIQIDA----ADS--TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++L++P+ + A +DS TD L IP L+QH+I++P +L L SFI
Sbjct: 249 RLSLKDPVFVSAHSQPSDSPETDAATNDKHLAIPKGLEQHYIISPLPKKLSILWSFIKTH 308
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q SK+LVFM++ + E + + L+G Q R + F F +
Sbjct: 309 LQ-------SKILVFMSSSKQVRFVFETFKR-MHPGVPLLHLYGKQKQMTRLQTFNRFTT 360
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
++ VL TD+AARGLD P V+W+VQ AP + YVHRVGRTAR G ++L L PSE
Sbjct: 361 MQHAVLFATDIAARGLDFPSVNWVVQVDAPEDAETYVHRVGRTARYESNGKAMLMLCPSE 420
Query: 769 VK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
+ +++ L+ + + + +IK++ E+ +++ ++
Sbjct: 421 EEGMMKSLKEKGVEVAKIKIR-----------------------ESKTQSIENMLQNLAF 457
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q+ + A + + S++R KD + +F ++ FA S L AP +
Sbjct: 458 QEPEIKYLAQRAFVSYLR-SVHLQKD-KEVFKVTELPAEEFAASLGLPGAPKI 508
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 153/313 (48%), Gaps = 69/313 (22%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A+II P
Sbjct: 76 MTDIQAKSLPVSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPQDGLGALIISP 133
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ + ++ + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 134 TRELAVQIFEVLRSIGGYHSFSA-GLVIGGKNLKDERDRLSR-MNILVATPGRLLQHMDQ 191
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T + ++ LVLDEADRILD G+ R + L L K + Q++L SAT T +
Sbjct: 192 TVGFESDNLQLLVLDEADRILDMGFSRTLTALLSHLPKSR---QTLLFSATQTKSVA--- 245
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
D+A L + P F S + +P
Sbjct: 246 ----------------------------DLAR----LSLKDPVFVSAHSQPSDSP----- 268
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
+ DAA + D H L IP L+QH+I++P +L L SFI Q
Sbjct: 269 ---------ETDAA-TNDKH-----LAIPKGLEQHYIISPLPKKLSILWSFIKTHLQ--- 310
Query: 306 EDEESKMLVFMAT 318
SK+LVFM++
Sbjct: 311 ----SKILVFMSS 319
>gi|301754659|ref|XP_002913145.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Ailuropoda
melanoleuca]
gi|281343809|gb|EFB19393.1| hypothetical protein PANDA_000939 [Ailuropoda melanoleuca]
Length = 600
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 265/498 (53%), Gaps = 50/498 (10%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPMRLHPRVLGALRE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K+ + A+II PTRELA+Q E+ K F GG
Sbjct: 67 ILEILLRREEKL-KKNQVGAIIITPTRELAIQIDEVLAHFMKPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIR-KGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ AR + +G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVARFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ QN ++ K L+F +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL----QN---HKQEKHLIFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR +SG+L+CTDV ARG+D+P V+W++QY PSS++
Sbjct: 293 GVEVMCIHGKM-KYKRGKIFMEFRRSQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L+ N++ ++E+KL+ + + L
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLEINQKCPLQEMKLQKNVGDFLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+++ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYIQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSV 880
+ A+ FAL P +
Sbjct: 446 LDFASLARGFALLRMPKM 463
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 143/332 (43%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ K F GG + AR + +G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLAHFMKPFPQFSQILWIGGRNPGEDVARFKEQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVRSLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ +++V + L F+
Sbjct: 207 QEVESLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
QN ++ K L+F +T +Y+ + L
Sbjct: 263 --QN---HKQEKHLIFFSTCACVEYYGKALEA 289
>gi|397516334|ref|XP_003828385.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Pan paniscus]
Length = 904
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 261/494 (52%), Gaps = 55/494 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 97 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 151
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 152 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 208
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ +
Sbjct: 209 LKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAV 267
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 268 IENLPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 317
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV K ++ L SF+ + K +VF ++ Y + L ++
Sbjct: 318 QNYIVCELKQKISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVS 369
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 370 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 429
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR +G +LL L+PSE +V++L +++ ++EIK+ + +L
Sbjct: 430 RAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKL 475
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
D +Q ES + Q + L A + + S+VR + Y + +F+ ++ +
Sbjct: 476 ID---------VQKKLESILAQDQDLKERAQRCFVSYVR--SVYLMKDKEVFDVSKLPIP 524
Query: 867 HFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 525 EYALSLGLAVAPRI 538
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 120 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 177
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 178 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 235
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 236 TVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQT 285
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 225 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 281
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV K ++ L S
Sbjct: 282 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELKQKISVLYS 334
Query: 296 FI 297
F+
Sbjct: 335 FL 336
>gi|114640235|ref|XP_001141618.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Pan
troglodytes]
gi|410221128|gb|JAA07783.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410260526|gb|JAA18229.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410287964|gb|JAA22582.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410335061|gb|JAA36477.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
Length = 875
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 257/484 (53%), Gaps = 51/484 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV K
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELKQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
+G +LL L+PSE +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKLID-------- 449
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+Q ES + Q + L A + + S+VR + Y + +F+ ++ + +A S L
Sbjct: 450 -VQKKLESILAQDQDLKERAQRCFVSYVR--SVYLMKDKEVFDVSKLPIPEYALSLGLAV 506
Query: 877 APSV 880
AP +
Sbjct: 507 APRI 510
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQT 257
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV K ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELKQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|343425408|emb|CBQ68943.1| probable HCA4-can suppress the U14 snoRNA rRNA processing function
[Sporisorium reilianum SRZ2]
Length = 893
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 254/482 (52%), Gaps = 54/482 (11%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
++ LN+ T +T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K
Sbjct: 70 RRGLNKA-GYTDMTDIQAKSLPLSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWG 126
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
DG+ A+II PTRELA+Q E+ K+ T+ + GG+ +K EK R+ + +++LV
Sbjct: 127 PSDGLGALIISPTRELAIQIFEVLRKIGPYHTFSA-GLVIGGKDVKQEKDRLSR-MNVLV 184
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
ATPGRLL H T S ++ LVLDEADRILD G+ R + +E L + + Q++L
Sbjct: 185 ATPGRLLQHMDQTLGFDTSNLQVLVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLF 241
Query: 583 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
SAT T V+ LA ++LQ+P + + + +T P L+QH+++ + +L L
Sbjct: 242 SATQTKRVKDLARLSLQDPEYVAVREPENEGST------PRGLEQHYMLVELEKKLDLLF 295
Query: 643 SFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERT 700
SFI KC K LVFM++ + E L ++ LHG Q++R
Sbjct: 296 SFIRTHTKC---------KALVFMSSCRQVQFVHETFCK-LRPGVSLMALHGKQKQAKRL 345
Query: 701 EVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSS 760
++F F + +L TD+AARGLD P VDW++Q P Y+HRVGRTAR +G+S
Sbjct: 346 QIFTQFTKTQHALLFATDIAARGLDFPAVDWVIQLDVPEDVDTYIHRVGRTARYTAKGNS 405
Query: 761 LLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQ 819
LLF++PSE K ++E L + I I IK K E+ ++Q
Sbjct: 406 LLFVLPSEEKGILEALATKNIPIGRIKPK-----------------------ESKTQSIQ 442
Query: 820 MSFESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
++ Q+ + A K + S+VR + +KD IF+ + L FA + L AP
Sbjct: 443 NQLQAFAFQEPQIKHLAQKAFVSYVRSVHLQKNKD---IFDVTALPLEPFAAALGLPGAP 499
Query: 879 SV 880
V
Sbjct: 500 KV 501
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T +T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A+II
Sbjct: 79 TDMTDIQAKSLPLSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPSDGLGALII 136
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+Q E+ K+ T+ + GG+ +K EK R+ + +++LVATPGRLL H
Sbjct: 137 SPTRELAIQIFEVLRKIGPYHTFSA-GLVIGGKDVKQEKDRLSR-MNVLVATPGRLLQHM 194
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ R + +E L + + Q++L SAT T
Sbjct: 195 DQTLGFDTSNLQVLVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLFSATQT 246
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 22/145 (15%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +TL F S ++ LVLDEADRILD G+ R + +E L + + Q++L S
Sbjct: 186 TPGRLLQHMDQTLGFDTSNLQVLVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLFS 242
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V+ LA ++LQ+P + + + +T P L+QH+++ + +L L S
Sbjct: 243 ATQTKRVKDLARLSLQDPEYVAVREPENEGST------PRGLEQHYMLVELEKKLDLLFS 296
Query: 296 FIL--GKCQNVNEDEESKMLVFMAT 318
FI KC K LVFM++
Sbjct: 297 FIRTHTKC---------KALVFMSS 312
>gi|213405451|ref|XP_002173497.1| ATP-dependent RNA helicase dbp4 [Schizosaccharomyces japonicus
yFS275]
gi|212001544|gb|EEB07204.1| ATP-dependent RNA helicase dbp4 [Schizosaccharomyces japonicus
yFS275]
Length = 767
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 250/489 (51%), Gaps = 50/489 (10%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+E+ P P K+ + + + T +Q+ +I L G D+L ++TGSGKTLA+ IP+I
Sbjct: 41 FEDLPLSQP--TKSALKNAHFVKCTDIQKKAIYVALKGRDILGAAKTGSGKTLAFLIPVI 98
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L R K + DG+ A+II PTRELA+QT E K+ + ++ + GG K E+
Sbjct: 99 ENL--YRRKWTPYDGLGALIISPTRELAMQTFETLVKIGRLHSFSA-GLIIGGNDYKQER 155
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
R+ + ++ILV TPGRLL H S ++ LVLDEADRILD G+ + + + L
Sbjct: 156 DRLSR-MNILVCTPGRLLQHMDQAINFDTSSLQMLVLDEADRILDMGFRKTLDAIITSLP 214
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
K++ Q++L SAT T +V LA ++L +P D +H D V PD+L Q ++V
Sbjct: 215 KKR---QTMLFSATQT-SVSDLARLSLHDP------DYISVHEHADH-VTPDNLNQFYLV 263
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P +L L FI + K++VF ++ + E L + LH
Sbjct: 264 APLPEKLDILFGFIKTHLK-------LKIIVFFSSCKQVRFAFECFKR-LRPGVPLMHLH 315
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q+ RTE+ F S K+ VL+CTD+ ARGLD P VDW+VQ AP Y+HRVGRT
Sbjct: 316 GKQKQASRTEIAAKFTSTKNAVLLCTDIVARGLDFPAVDWVVQVDAPEDVQTYIHRVGRT 375
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR G++LL L+PSE ++ L ++++ IE I +K
Sbjct: 376 ARFERGGNALLMLLPSEEAFLKRLDSKKVPIERINIK----------------------- 412
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
E T+++ + ++ + L K + S+VR + + + +F ++ FA +
Sbjct: 413 EGKKTSIRNNLQALCFKDPDLKYLGQKAFISYVR--SVFLLKDKEVFKVDELPTAEFADA 470
Query: 872 FALRDAPSV 880
L P +
Sbjct: 471 LGLPGTPRI 479
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 108/180 (60%), Gaps = 7/180 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ + T +Q+ +I L G D+L ++TGSGKTLA+ IP+I+ L R K + DG+ A+
Sbjct: 58 HFVKCTDIQKKAIYVALKGRDILGAAKTGSGKTLAFLIPVIENL--YRRKWTPYDGLGAL 115
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+QT E K+ + ++ + GG K E+ R+ + ++ILV TPGRLL
Sbjct: 116 IISPTRELAMQTFETLVKIGRLHSFSA-GLIIGGNDYKQERDRLSR-MNILVCTPGRLLQ 173
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H S ++ LVLDEADRILD G+ + + + L K++ Q++L SAT T +
Sbjct: 174 HMDQAINFDTSSLQMLVLDEADRILDMGFRKTLDAIITSLPKKR---QTMLFSATQTSVS 230
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP + + F S ++ LVLDEADRILD G+ + + + L K++ Q++L S
Sbjct: 167 TPGRLLQHMDQAINFDTSSLQMLVLDEADRILDMGFRKTLDAIITSLPKKR---QTMLFS 223
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L +P D +H D V PD+L Q ++V P +L L
Sbjct: 224 ATQT-SVSDLARLSLHDP------DYISVHEHADH-VTPDNLNQFYLVAPLPEKLDILFG 275
Query: 296 FI 297
FI
Sbjct: 276 FI 277
>gi|395324246|gb|EJF56690.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 227/413 (54%), Gaps = 32/413 (7%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
++ + P I K+ L + +T +Q SI L G DVL ++TGSGKTLA+ IP+
Sbjct: 55 AFADLP-ISDLTKRGLKRA-HFVDMTDIQSKSIPTSLKGKDVLGAARTGSGKTLAFLIPV 112
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
++ L R K +DG+ A+II PTRELA Q E+ + + + GG+ +K E
Sbjct: 113 LEIL--YRRKWGPQDGLGALIITPTRELAAQIFEVLRSIG-GYHSFSAGLIIGGKNLKDE 169
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+ R+ + ++ILVATPGRLL H T + ++ LVLDEADRILD G++R +A L L
Sbjct: 170 RERLSR-MNILVATPGRLLQHMDQTIGFECDNLQLLVLDEADRILDMGFQRTLAALLSHL 228
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
K + Q++L SAT T +V LA ++L++P+ + I T P +L+QH++
Sbjct: 229 PKSR---QTLLFSATQTQSVADLARLSLKDPVPVG------IEETLTEGATPKALEQHYV 279
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
V +L L SFI Q +K LVF+++ + E + + +L
Sbjct: 280 VCELDKKLDVLWSFIKSHLQ-------TKTLVFLSSCKQVRFVFETFCK-MHPGVPLLQL 331
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG Q R E FK F S+K VL TD+AARGLD P VDW++Q AP + Y+HRVGR
Sbjct: 332 HGKQKQMTRLETFKRFTSMKHAVLFATDIAARGLDFPSVDWVLQVDAPEDADTYIHRVGR 391
Query: 751 TARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLK--------DCLQNL 794
TAR G LL L PSE + ++ L+ + I +++IK+K + LQNL
Sbjct: 392 TARYESAGKGLLLLAPSEEEGMLAALKKKNIEVQKIKIKASKTQSIANSLQNL 444
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ +T +Q SI L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A+
Sbjct: 73 HFVDMTDIQSKSIPTSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPQDGLGAL 130
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA Q E+ + + + GG+ +K E+ R+ + ++ILVATPGRLL
Sbjct: 131 IITPTRELAAQIFEVLRSIG-GYHSFSAGLIIGGKNLKDERERLSR-MNILVATPGRLLQ 188
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T + ++ LVLDEADRILD G++R +A L L K + Q++L SAT T
Sbjct: 189 HMDQTIGFECDNLQLLVLDEADRILDMGFQRTLAALLSHLPKSR---QTLLFSATQT 242
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G++R +A L L K + Q++L S
Sbjct: 182 TPGRLLQHMDQTIGFECDNLQLLVLDEADRILDMGFQRTLAALLSHLPKSR---QTLLFS 238
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L++P+ + I T P +L+QH++V +L L S
Sbjct: 239 ATQTQSVADLARLSLKDPVPV------GIEETLTEGATPKALEQHYVVCELDKKLDVLWS 292
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q +K LVF+++
Sbjct: 293 FIKSHLQ-------TKTLVFLSS 308
>gi|344297284|ref|XP_003420329.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Loxodonta africana]
Length = 599
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 266/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP++ L + + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPWVLGALRD-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F + GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPQLSQILWIGGRNPGE 125
Query: 510 EKARIR-KGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R + +G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKAQGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
++A +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 SVAILCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E V L N++ ++E++L+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYVSFLAINQKCPLQEMRLQKNTVDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
++ A A + FE + K + S+V+ YA + L IF K
Sbjct: 406 -------KLKAMALADRAVFEKGM-----------KAFVSYVQAYAKHECSL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLKMPKMPELRGK 469
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ + K F + GG + R + +G +I+VATPGR
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPQLSQILWIGGRNPGEDVERFKAQGGNIIVATPGR- 144
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
L+ + R AE L++
Sbjct: 145 --------------------------LEDMFRRK-AEGLDL------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 -----RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|62089354|dbj|BAD93121.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 variant [Homo sapiens]
Length = 845
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 257/484 (53%), Gaps = 51/484 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 85 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 141
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 142 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 199
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 200 NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR-- 257
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 258 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 309
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 310 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSILALHGRQQQ 361
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 362 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 421
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
+G +LL L+PSE +V++L +++ ++EIK+ + +L D
Sbjct: 422 DGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKLID-------- 459
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+Q ES + Q + L A + + S+VR + Y + +F+ ++ + +A S L
Sbjct: 460 -VQKKLESILAQDQDLKERAQRCFVSYVR--SVYLMKDKEVFDVSKLPIPEYALSLGLAV 516
Query: 877 APSV 880
AP V
Sbjct: 517 APRV 520
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 102 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 159
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 160 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 217
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 218 TVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQTKS 269
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 207 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 263
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 264 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 316
Query: 296 FI 297
F+
Sbjct: 317 FL 318
>gi|326473030|gb|EGD97039.1| ATP-dependent RNA helicase DBP4 [Trichophyton tonsurans CBS 112818]
Length = 703
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 251/471 (53%), Gaps = 48/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGAL 126
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSATQTKKV 241
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++LQ+P I +H S P +L+QH++VTP +L L SFI +
Sbjct: 242 SDLARLSLQDPEYIS------VHQAASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSLK 294
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF ++ + E + I LHG Q R ++ F + K
Sbjct: 295 -------SKVIVFFSSSKEVRFVYEAFRQ-MQPGIPLLHLHGRQKQGARLDITHKFSASK 346
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EV 769
+ L TDV ARGLD P VDW++Q P S Y+HRVGRTAR +G ++LFL PS E+
Sbjct: 347 NSCLFATDVVARGLDFPAVDWVIQLDCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEI 406
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++ L+ ++I IE+I ++ Q + +++ M F+ L
Sbjct: 407 GMLSRLEQKKIPIEKINIRANKQQSIKHQLQ------------------NMCFKDPQL-- 446
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K L K +TS+V+ + + + + +F+ K + L +A S L AP +
Sbjct: 447 KYL---GQKAFTSYVK--SIHIQKDKEVFDVKALPLEEYAASLGLPGAPRI 492
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 151/317 (47%), Gaps = 82/317 (25%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGAL 126
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSA------ 235
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
T+T K S + L L Q P++ SV +A
Sbjct: 236 -----TQTKKVSDLARLSL------------------------QDPEYISVHQAA----- 261
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
S P +L+QH++VTP +L L SFI
Sbjct: 262 ----------------------------SSATPSTLQQHYVVTPLPDKLDTLWSFIRSSL 293
Query: 302 QNVNEDEESKMLVFMAT 318
+ SK++VF ++
Sbjct: 294 K-------SKVIVFFSS 303
>gi|354547499|emb|CCE44233.1| hypothetical protein CPAR2_400340 [Candida parapsilosis]
Length = 758
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 258/489 (52%), Gaps = 46/489 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L ++ I+ DG+ A+I+ P
Sbjct: 72 LTDIQKKTIPIALKGHDLMGTARTGSGKTLAFLIPVIEIL--IKNDITEYDGLAALIVSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ K + +TGG+ ++ EK RI + ++ILV TPGR+ H
Sbjct: 130 TRELAVQIFEVLAKIGK-YNSFSAGLVTGGKDVQYEKERISR-MNILVGTPGRISQHLNE 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
++ S ++ LVLDEADR LD G+++ I I+K P Q++L SAT T +VQ LA
Sbjct: 188 AVGMETSNLQVLVLDEADRCLDMGFKKQIDN---IVKHLPPTRQTLLFSATTTDSVQDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L NP +I + D+ IP+SL Q+++ P +L L SFI +
Sbjct: 245 RLSLTNPKRIGTSSDKDVS------TIPESLDQYYVRVPLDEKLDVLWSFIKSHLK---- 294
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK+LVF ++ Y E T L I+ KL+G Q+ R E F + L
Sbjct: 295 ---SKILVFFSSSKQVQYTYETFRT-LQPGISLLKLYGRNKQTSRLETTMKFAQAQHVCL 350
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
TD+ ARGLD P +DW++Q P YVHRVGR+AR G +G SLL L PSE E+
Sbjct: 351 FATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQGKSLLMLTPSE----ED 406
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
+R++I I+ K L+++K + + +++ +S + ++
Sbjct: 407 AFLQRLKIHNIEPK-----LMNIK-------------QKSKKSIRPQLQSLCFKDPVMKN 448
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKEEL 893
+ + ++ F + Y + + +F+ + + +A S L AP + I G K K+
Sbjct: 449 LGQRAFIAY--FKSVYIQKDKEVFDVESLPAEAYAASLGLPGAPKIKIKGGSASKEKKNE 506
Query: 894 KNKKMAINK 902
+A++K
Sbjct: 507 SRMLLALSK 515
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L ++ I+ DG+ A+I+ P
Sbjct: 72 LTDIQKKTIPIALKGHDLMGTARTGSGKTLAFLIPVIEIL--IKNDITEYDGLAALIVSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ K + +TGG+ ++ EK RI + ++ILV TPGR+ H
Sbjct: 130 TRELAVQIFEVLAKIGK-YNSFSAGLVTGGKDVQYEKERISR-MNILVGTPGRISQHLNE 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ S ++ LVLDEADR LD G+++ I I+K P Q++L SAT T
Sbjct: 188 AVGMETSNLQVLVLDEADRCLDMGFKKQID---NIVKHLPPTRQTLLFSATTT 237
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I I+K P Q++L SAT T +VQ LA ++
Sbjct: 191 METSNLQVLVLDEADRCLDMGFKKQIDN---IVKHLPPTRQTLLFSATTTDSVQDLARLS 247
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + D+ IP+SL Q+++ P +L L SFI +
Sbjct: 248 LTNPKRIGTSSDKDVS------TIPESLDQYYVRVPLDEKLDVLWSFIKSHLK------- 294
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 295 SKILVFFSSSKQVQYTYETFRT 316
>gi|335301136|ref|XP_001927747.2| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 1 [Sus scrofa]
Length = 600
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 264/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPRVLDVLQE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ AR ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVARFKEHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGAAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-R 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
++ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PSS++
Sbjct: 293 SVKIMCIHGKM-KYKRNKIFMEFRQLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E V L N++ ++ +KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYVNFLAINQKCPLQAMKLQKNTVDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASIARGFALLRMPKMPELRGK 469
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 142/325 (43%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + AR ++ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L A+C
Sbjct: 151 R-------KAEGLDL----------------------------------------ASC-- 161
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 162 -------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP++I + ++T P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRISVKEKGAAASSTQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|330794200|ref|XP_003285168.1| hypothetical protein DICPUDRAFT_76134 [Dictyostelium purpureum]
gi|325084889|gb|EGC38307.1| hypothetical protein DICPUDRAFT_76134 [Dictyostelium purpureum]
Length = 815
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 262/496 (52%), Gaps = 48/496 (9%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
+ T +++ P + +K L E ++T +Q+ S+ L G D+L ++TGSGKTLA+
Sbjct: 107 SATIFKDLP-LSQLTQKGLTES-KFYKLTDIQRASLPHTLCGRDILGAARTGSGKTLAFI 164
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
IP+++ L R + SR DGI A+++ PTRELA+Q ++ + K T+ L GG +
Sbjct: 165 IPVLETL--WRNRWSRNDGIGAIVLSPTRELAIQIFDVLKSVGKHHTFSA-GLLIGGRNV 221
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
EK ++ ++IL+ATPGRLL H T S ++ LVLDEADRILD G+ + + L
Sbjct: 222 TQEKEKVN-AMNILIATPGRLLQHMDETYGFDCSNLKMLVLDEADRILDLGFSKSLNSIL 280
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
E L KQ+ Q++L SAT T +V+ L ++L P I + D + P +L Q
Sbjct: 281 ENLPKQR---QTLLFSATQTKSVRDLVRLSLNEPEYISVYEK-------DIITAPQNLTQ 330
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
+ P +++L L SF+ SK++VF A+ + E +L +
Sbjct: 331 TICIIPLEMKLNMLYSFVKTHLT-------SKVIVFFASCKQIRFVYETFR-LLNPGTSL 382
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
F+LHG M Q R EVF+ F K+GVL TD+AARGLD P V+W++Q P Y+HR
Sbjct: 383 FQLHGKMKQWTRLEVFEDFCKKKAGVLFATDIAARGLDFPEVEWVIQVDCPDDIETYIHR 442
Query: 748 VGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
+GRTAR G ++ L+PSE + + L ++ E+ L+ + L+S+ S+L+
Sbjct: 443 IGRTARNNATGQAITILLPSEKEAMTALLEKQKMKYEV-LEPNPEKLVSID-----SQLS 496
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
F S + K L A K + S++R + Y + + IFN +++++
Sbjct: 497 -------------GFLSEKTELKYL---AQKSFVSYLR--SVYRQSNKEIFNIEKLNIED 538
Query: 868 FAKSFALRDAPSVISG 883
F+KS L P + G
Sbjct: 539 FSKSLGLLGKPQISFG 554
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ S+ L G D+L ++TGSGKTLA+ IP+++ L R + SR DGI A+++
Sbjct: 131 KLTDIQRASLPHTLCGRDILGAARTGSGKTLAFIIPVLETL--WRNRWSRNDGIGAIVLS 188
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q ++ + K T+ L GG + EK ++ ++IL+ATPGRLL H
Sbjct: 189 PTRELAIQIFDVLKSVGKHHTFSA-GLLIGGRNVTQEKEKVN-AMNILIATPGRLLQHMD 246
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T S ++ LVLDEADRILD G+ + + LE L KQ+ Q++L SAT T +
Sbjct: 247 ETYGFDCSNLKMLVLDEADRILDLGFSKSLNSILENLPKQR---QTLLFSATQTKS 299
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 162 KKQKPQFQSILLSATLTPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFL 219
+K+K +IL++ TP ET F S ++ LVLDEADRILD G+ + + L
Sbjct: 224 EKEKVNAMNILIA---TPGRLLQHMDETYGFDCSNLKMLVLDEADRILDLGFSKSLNSIL 280
Query: 220 EILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 279
E L KQ+ Q++L SAT T +V+ L ++L P I + D + P +L Q
Sbjct: 281 ENLPKQR---QTLLFSATQTKSVRDLVRLSLNEPEYISVYEK-------DIITAPQNLTQ 330
Query: 280 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMAT 318
+ P +++L L SF+ SK++VF A+
Sbjct: 331 TICIIPLEMKLNMLYSFVKTHLT-------SKVIVFFAS 362
>gi|390605167|gb|EIN14558.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 808
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 266/509 (52%), Gaps = 56/509 (11%)
Query: 385 ALFAP----TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
A F P ++ E P I K+ L + T +T +Q S+ L G DVL ++TGS
Sbjct: 46 AQFVPHDGLKAFAELP-ISEITKRGLKKAW-FTDMTDIQSKSLPLSLKGKDVLGAARTGS 103
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLA+ +P+++ L R K +DG+ A+II PTRELA+Q E+ + +
Sbjct: 104 GKTLAFLVPVLELL--YRRKWGPQDGLGALIISPTRELAVQIFEVLRSIG-GYHNFSAGL 160
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
+ GG+ +K E+ R+ + ++ILVATPGRLL H T ++ LVLDEADRILD G+
Sbjct: 161 VIGGKNLKDERDRLGR-MNILVATPGRLLQHMDQTIGFDCDNLQILVLDEADRILDMGFS 219
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIH------- 613
R ++ L L K + Q++L SAT T +VQ LA ++LQNP+ + +++I+
Sbjct: 220 RTLSALLSHLPKGR---QTLLFSATQTQSVQDLARLSLQNPVFVSTQHASEINTKDPSKI 276
Query: 614 NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYH 673
+ T + IP +L+QH++V +L L SFI SK LVF+++ +
Sbjct: 277 SLTSTDFIPKTLEQHYVVCELDQKLNLLFSFIKSHLT-------SKTLVFLSSCKQVRFV 329
Query: 674 TELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIV 733
E L + LHG Q R ++++ F + K VL TD+A+RGLD P VDW+V
Sbjct: 330 FETFCK-LHPGVPLMHLHGKQKQQTRIDIYQKFIASKHSVLFATDIASRGLDFPGVDWVV 388
Query: 734 QYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQ 792
Q AP + YVHRVGRTAR EG +LL L PSE + ++ L+++ +++ +IK+K Q
Sbjct: 389 QVDAPEDADTYVHRVGRTARYESEGKALLVLCPSEEEGMLRLLESKGLQVAKIKVKGSKQ 448
Query: 793 NLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR-FYASYS 851
K++ L LA + E + + + S++R + +
Sbjct: 449 Q----KIDNQLQNLAFKDPE-------------------IKYLGQRAFVSYLRSIHLQKN 485
Query: 852 KDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
KD +F ++ + FA S L AP +
Sbjct: 486 KD---VFKLSELPIQAFAASLGLPGAPKI 511
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 68/316 (21%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T +T +Q S+ L G DVL ++TGSGKTLA+ +P+++ L R K +DG+ A+I
Sbjct: 75 FTDMTDIQSKSLPLSLKGKDVLGAARTGSGKTLAFLVPVLELL--YRRKWGPQDGLGALI 132
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ + + + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 133 ISPTRELAVQIFEVLRSIG-GYHNFSAGLVIGGKNLKDERDRLGR-MNILVATPGRLLQH 190
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
T ++ LVLDEADRILD G+ R ++ L L K + Q++L SAT T +
Sbjct: 191 MDQTIGFDCDNLQILVLDEADRILDMGFSRTLSALLSHLPKGR---QTLLFSATQTQSV- 246
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
+D+A L Q P F
Sbjct: 247 ------------------------------QDLAR----LSLQNPVF------------- 259
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
++ Q+ +I+ D + I + T + IP +L+QH++V +L L SFI
Sbjct: 260 -----VSTQHASEINTKDPSKI-SLTSTDFIPKTLEQHYVVCELDQKLNLLFSFIKSHLT 313
Query: 303 NVNEDEESKMLVFMAT 318
SK LVF+++
Sbjct: 314 -------SKTLVFLSS 322
>gi|307195496|gb|EFN77382.1| Probable ATP-dependent RNA helicase DDX55-like protein
[Harpegnathos saltator]
Length = 588
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 159/487 (32%), Positives = 266/487 (54%), Gaps = 65/487 (13%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
+T VQ I +L+G D+ + TGSGKTLA+ +P+++ LQ+ + K + I A+II
Sbjct: 27 NMTPVQAACIPLLLNGKDIAAEAVTGSGKTLAFLVPLLEILQKRQEKWKIME-IGAIIIS 85
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA Q EI K K + L GG ++ + +++KG++I+VATPGRL D
Sbjct: 86 PTRELATQISEILEKFLKRIPLLKQVLLVGGVTLQEDAEKLKKGVNIIVATPGRLEDILS 145
Query: 534 HTETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
+ +++ S +E L+LDEADR+LD G+ + L L + + ++ L SAT T
Sbjct: 146 NCTSIRLSSCVKSLELLILDEADRLLDLGFSTSLDSILSYLPRLR---RTGLFSATQTKE 202
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
+Q+L L+NP I + ++I P +L ++I+ P+ +L + FI K
Sbjct: 203 LQQLIRAGLRNPALIVVKEKSNIST-------PVNLSNNYIIVQPEHKLSVMIDFIHSKG 255
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
++ K ++F++T DY ++++ T+L +I LHG M +S+R ++F FR+
Sbjct: 256 FDM------KYMIFLSTCACVDYFSQIIRTLL-PSINVSALHGKM-KSKRYKIFDQFRNA 307
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV 769
+SG+LICTDV ARG+D+ V+W++QY PS+++ +VHR GRTAR+G+EG++LLFL+ +E
Sbjct: 308 QSGILICTDVMARGIDISEVNWVLQYDPPSTASSFVHRCGRTARIGNEGNALLFLLETED 367
Query: 770 KLVEEL-QNRRIRIEEIK-------LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
V+ + +N+++ + +I+ +K+CL+ +
Sbjct: 368 AYVDFIKRNQKVELHKIERETSEDTVKECLKCMRD------------------------- 402
Query: 822 FESAVLQQK--ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
LQQK ++ A + + S+V+ Y+ + +L I K I LG A F L P
Sbjct: 403 -----LQQKDRLIFDKANRAFVSYVQAYSKHECNL--ILRLKDIDLGKLAMGFGLLRMPR 455
Query: 880 VISGIGK 886
+ GK
Sbjct: 456 MPELKGK 462
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 104/178 (58%), Gaps = 8/178 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
+T VQ I +L+G D+ + TGSGKTLA+ +P+++ LQ+ + K + I A+II
Sbjct: 27 NMTPVQAACIPLLLNGKDIAAEAVTGSGKTLAFLVPLLEILQKRQEKWKIME-IGAIIIS 85
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q EI K K + L GG ++ + +++KG++I+VATPGRL D
Sbjct: 86 PTRELATQISEILEKFLKRIPLLKQVLLVGGVTLQEDAEKLKKGVNIIVATPGRLEDILS 145
Query: 125 HTETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ +++ S +E L+LDEADR+LD G+ + L L + + ++ L SAT T
Sbjct: 146 NCTSIRLSSCVKSLELLILDEADRLLDLGFSTSLDSILSYLPRLR---RTGLFSATQT 200
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 16/137 (11%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
+E L+LDEADR+LD G+ + L L + + ++ L SAT T +Q+L L+NP
Sbjct: 159 LELLILDEADRLLDLGFSTSLDSILSYLPRLR---RTGLFSATQTKELQQLIRAGLRNPA 215
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
I + ++I P +L ++I+ P+ +L + FI K ++ K ++
Sbjct: 216 LIVVKEKSNIST-------PVNLSNNYIIVQPEHKLSVMIDFIHSKGFDM------KYMI 262
Query: 315 FMATQDMADYHTELLST 331
F++T DY ++++ T
Sbjct: 263 FLSTCACVDYFSQIIRT 279
>gi|260949783|ref|XP_002619188.1| hypothetical protein CLUG_00347 [Clavispora lusitaniae ATCC 42720]
gi|238846760|gb|EEQ36224.1| hypothetical protein CLUG_00347 [Clavispora lusitaniae ATCC 42720]
Length = 764
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 270/515 (52%), Gaps = 48/515 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N +T +Q+ I L G D++ ++TGSGKTLA+ +P+I++L + I+ DG+ A+
Sbjct: 63 NFVSMTDIQRKCIPLALKGEDIMGTARTGSGKTLAFLVPVIERL--VHSNITGLDGLAAL 120
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ TK+ K ++ +TGG+ ++ EK R+ + ++ILV TPGR+
Sbjct: 121 IISPTRELAVQIFEVLTKIGKHNSFSA-GLVTGGKDVQYEKERVAR-MNILVGTPGRVSQ 178
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T + S ++ LVLDEADR LD G+++ I + L P+ Q++L SAT + ++
Sbjct: 179 HLNETFGMDTSNLQVLVLDEADRCLDMGFKKQIDSIVSHLS---PERQTLLFSATQSDSI 235
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L NPI++ + + T P++L Q+++ P + +L L SFI +
Sbjct: 236 KDLARLSLTNPIKVGVSSDATLSAT------PETLDQYYVRIPLEEKLDVLWSFIKSHLK 289
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK+LVF ++ Y E T L I+ KL+G Q+ R E F +
Sbjct: 290 -------SKILVFFSSSKQVQYTYESFRT-LQPGISLLKLYGRHKQTSRLETTTKFSHAQ 341
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
L TD+ ARGLD P +DW+VQ P + YVHRVGR AR G G SLL L PSE
Sbjct: 342 YACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRCARFGRPGKSLLMLTPSE-- 399
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
EE +R++ + I +K ++++K + + +++ +S +
Sbjct: 400 --EEGMLKRLKNQNIDIK-----IMNIK-------------QKSKKSIRPQLQSLCFKDP 439
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKN 889
+ + + S+ R + Y + + +F + I +A+S L AP + I G K
Sbjct: 440 QMKNLGQRAFISYYR--SVYIQKDKDVFKIEDIPAEKYAESLGLPGAPKIKIKGGEGNKE 497
Query: 890 KEELKNKKMAINK--EKSFKQRGNFSKKQMLSEFD 922
K+ + + M ++K + + KK++ +++D
Sbjct: 498 KKNMSRQLMQLSKANDNGENEEDEDGKKKVRTKYD 532
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 11/225 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +T +Q+ I L G D++ ++TGSGKTLA+ +P+I++L + I+ DG+ A+
Sbjct: 63 NFVSMTDIQRKCIPLALKGEDIMGTARTGSGKTLAFLVPVIERL--VHSNITGLDGLAAL 120
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ TK+ K ++ +TGG+ ++ EK R+ + ++ILV TPGR+
Sbjct: 121 IISPTRELAVQIFEVLTKIGKHNSFSA-GLVTGGKDVQYEKERVAR-MNILVGTPGRVSQ 178
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H T + S ++ LVLDEADR LD G+++ I + L P+ Q++L SAT + +
Sbjct: 179 HLNETFGMDTSNLQVLVLDEADRCLDMGFKKQIDSIVSHL---SPERQTLLFSATQSDSI 235
Query: 182 ---CWCKHTETLKFSKVEHLVLDEADRILDQGYER-DIAEFLEIL 222
T +K L LDQ Y R + E L++L
Sbjct: 236 KDLARLSLTNPIKVGVSSDATLSATPETLDQYYVRIPLEEKLDVL 280
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 16/139 (11%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
S ++ LVLDEADR LD G+++ I + L P+ Q++L SAT + +++ LA ++L N
Sbjct: 189 SNLQVLVLDEADRCLDMGFKKQIDSIVSHLS---PERQTLLFSATQSDSIKDLARLSLTN 245
Query: 253 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKM 312
PI++ + + T P++L Q+++ P + +L L SFI + SK+
Sbjct: 246 PIKVGVSSDATLSAT------PETLDQYYVRIPLEEKLDVLWSFIKSHLK-------SKI 292
Query: 313 LVFMATQDMADYHTELLST 331
LVF ++ Y E T
Sbjct: 293 LVFFSSSKQVQYTYESFRT 311
>gi|403292244|ref|XP_003937163.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Saimiri boliviensis
boliviensis]
Length = 600
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 260/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R R+ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFRQQGGNIIVATPGRLEDMFRRKAEGLDLASSVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE+L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILELLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PSS++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHRGSALVFLLPMEESYINFLAINQKCPLQEMKLQKNTMDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+S L + + K + S+V+ YA + +L IF K
Sbjct: 406 ------------------KLKSMALADRAVFEKGMKAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFAGLARGFALLRMPKMPELRGK 469
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 140/325 (43%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R R+ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFRQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L + R LD
Sbjct: 151 R-------KAEGLDLASSVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE+L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILELLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|19115564|ref|NP_594652.1| ATP-dependent RNA helicase Hca4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74625979|sp|Q9UTP9.1|DBP4_SCHPO RecName: Full=ATP-dependent RNA helicase dbp4
gi|6318264|emb|CAB60250.1| ATP-dependent RNA helicase Hca4 (predicted) [Schizosaccharomyces
pombe]
Length = 735
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 249/499 (49%), Gaps = 53/499 (10%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+ E P P K L IT +T +Q+ I L G D+L ++TGSGKTLA+ +P+I
Sbjct: 41 FAELPLTQP-TKSALKNAHFIT-LTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLI 98
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L R K + DG+ A++I PTRELA+QT E K+ + ++ + GG K EK
Sbjct: 99 ENL--YRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSA-GLIIGGNNYKEEK 155
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
R+ + ++ILV TPGRLL H S ++ L+LDEADRILD G+ + + L
Sbjct: 156 ERLSR-MNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLP 214
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ Q++L SAT T +V+ LA ++LQNP D +H D+ P +L Q ++
Sbjct: 215 VHR---QTMLFSATQTKSVKDLARLSLQNP------DFISVHEN-DTSSTPSNLNQFYLT 264
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P +L L FI + K +VF+++ + E + I+ LH
Sbjct: 265 VPLTEKLDILFGFIRTHLK-------FKTIVFLSSCKQVRFVYETFRR-MRPGISLLHLH 316
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q+ RTEV F S + VL CTD+ ARGLD P VDW++Q AP Y+HRVGRT
Sbjct: 317 GKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRT 376
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR G++LL L+PSE ++ L++++I +E I +KD
Sbjct: 377 ARYNRSGNALLLLLPSEEAFLKRLESKKIAVERINVKDG--------------------- 415
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAK 870
T+++ ++ + + K + S++R Y KD +F ++ + FA
Sbjct: 416 --KKTSIRNQLQNLCFKDNDIKYIGQKAFISYLRSIYLQKDKD---VFQLDKLPVEAFAD 470
Query: 871 SFALRDAPSVISGIGKPKN 889
S L P + GK KN
Sbjct: 471 SLGLPGTPKIT--FGKLKN 487
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ I L G D+L ++TGSGKTLA+ +P+I+ L R K + DG+ A++I P
Sbjct: 62 LTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIENL--YRKKWTSLDGLGALVISP 119
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+QT E K+ + ++ + GG K EK R+ + ++ILV TPGRLL H
Sbjct: 120 TRELAIQTFETLVKIGRLHSFSA-GLIIGGNNYKEEKERLSR-MNILVCTPGRLLQHIDQ 177
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
S ++ L+LDEADRILD G+ + + L + Q++L SAT T +
Sbjct: 178 AVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHR---QTMLFSATQTKS 229
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
S ++ L+LDEADRILD G+ + + L + Q++L SAT T +V+ LA ++LQN
Sbjct: 184 SGLQMLILDEADRILDMGFRTTLDAIVSSLPVHR---QTMLFSATQTKSVKDLARLSLQN 240
Query: 253 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
P D +H D+ P +L Q ++ P +L L FI
Sbjct: 241 P------DFISVHE-NDTSSTPSNLNQFYLTVPLTEKLDILFGFI 278
>gi|29351661|gb|AAH49217.1| DDX10 protein, partial [Homo sapiens]
Length = 745
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 261/494 (52%), Gaps = 55/494 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAV 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 240 IENLPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + ++ L SF+ + K +VF ++ Y + L ++
Sbjct: 290 QNYIVCELQQKISVLYSFLRSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGVS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR +G +LL L+PSE +V++L +++ ++EIK+ + +L
Sbjct: 402 RAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKL 447
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
D +Q ES + Q + L A + + S+VR + Y + +F+ ++ +
Sbjct: 448 ID---------VQKKLESILAQDQDLKERAQRCFVSYVR--SVYLMKDKEVFDVSKLPIP 496
Query: 867 HFAKSFALRDAPSV 880
+A S L AP V
Sbjct: 497 EYALSLGLAVAPRV 510
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQT 257
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|390468336|ref|XP_002807202.2| PREDICTED: ATP-dependent RNA helicase DDX55 [Callithrix jacchus]
Length = 600
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 264/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPRVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + + F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTRHFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R R+ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFRQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE+L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEVLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSVQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PSS++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHRGSALVFLLPMEESYINFLAINQKCPLQEMKLQKNTVDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 139/325 (42%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + + F GG + R R+ G +I+VATPGRL D +
Sbjct: 91 TRELAIQIDEVLSHFTRHFPQFSQILWIGGRNPGEDVERFRQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE+L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEVLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSVQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|327304765|ref|XP_003237074.1| ATP-dependent RNA helicase DBP4 [Trichophyton rubrum CBS 118892]
gi|326460072|gb|EGD85525.1| ATP-dependent RNA helicase DBP4 [Trichophyton rubrum CBS 118892]
Length = 815
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 250/471 (53%), Gaps = 48/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGAL 126
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLIIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKV 241
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++LQ+P I +H S P +L+QH++VTP +L L SFI +
Sbjct: 242 SDLARLSLQDPEYIS------VHQAASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSLK 294
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF ++ + E + I LHG Q R ++ F + K
Sbjct: 295 -------SKIIVFFSSSKEVRFVYEAFRQ-MQPGIPLLHLHGRQKQGARLDITHKFSASK 346
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EV 769
+ L TDV ARGLD P VDW++Q P S Y+HRVGRTAR +G ++LFL PS EV
Sbjct: 347 NSCLFATDVVARGLDFPAVDWVIQLDCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEV 406
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++ L+ ++I IE+I ++ Q + +++ M F+ L
Sbjct: 407 GMLSRLEQKKIPIEKINIRANKQQSIKHQLQN------------------MCFKDPQL-- 446
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K L K +TS+V+ + + + + +F+ K + L + S L AP +
Sbjct: 447 KYL---GQKAFTSYVK--SIHIQKDKEVFDVKALPLEEYTASLGLPGAPRI 492
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 151/317 (47%), Gaps = 82/317 (25%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+
Sbjct: 69 HFKELTDIQSRAIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGAL 126
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L
Sbjct: 127 IISPTRELAIQIFEVLRKIGRYHTFSA-GLIIGGKSLQEEQERLGR-MNILVCTPGRMLQ 184
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H T ++ LVLDEADRI+D G++ + +E L K++ Q++L SA
Sbjct: 185 HMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSA------ 235
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
T+T K S + L L Q P++ SV +A
Sbjct: 236 -----TQTKKVSDLARLSL------------------------QDPEYISVHQAA----- 261
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
S P +L+QH++VTP +L L SFI
Sbjct: 262 ----------------------------SSATPSTLQQHYVVTPLPDKLDTLWSFIRSSL 293
Query: 302 QNVNEDEESKMLVFMAT 318
+ SK++VF ++
Sbjct: 294 K-------SKIIVFFSS 303
>gi|350424364|ref|XP_003493771.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Bombus
impatiens]
Length = 784
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 258/491 (52%), Gaps = 49/491 (9%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
T + + P + P K L E N +T +Q+ SI L G D+L ++TGSGKTLA+ IP
Sbjct: 39 TKFTDLP-LSPKTLKGLTEN-NYIAMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIP 96
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
+++ L + +R DG+ A++I PTRELA Q E K+ + I + GG+ +K
Sbjct: 97 VLEIL--YCKQWTRLDGLGALVITPTRELAYQIYETLRKVGRHHD-ISAGLIIGGKDLKF 153
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
EK R+ + +I++ TPGRLL H ++ LVLDEADR LD G+E+ + +E
Sbjct: 154 EKRRMDQ-CNIVICTPGRLLQHMDENPLFDCINMQVLVLDEADRCLDMGFEQTMNSIIEN 212
Query: 570 LKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHF 629
L P+ Q++L SAT T +V+ LA ++L++P+ + + H T P++L+Q +
Sbjct: 213 LP---PKRQTLLFSATQTKSVRDLARLSLKDPMYVSVHEHA-THTT------PEALEQSY 262
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
+V + ++ L SFI + K++VF ++ Y E+L L I+
Sbjct: 263 VVCALEDKVSMLWSFIRNHLK-------QKIIVFFSSCKQVKYIFEVLCR-LRPGISLLA 314
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
L+G++ Q R E+++TF +S VL TD+AARGLD P VDW+VQ P Y+HR G
Sbjct: 315 LYGTLHQLRRMEIYETFCKKQSAVLFATDIAARGLDFPAVDWVVQMDCPEDVNAYIHRAG 374
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
RTAR G LL L+PSE K++E+L+ R+I I I++
Sbjct: 375 RTARFQRNGECLLVLLPSEEKMIEKLKERKIPISMIQIN--------------------- 413
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
+ Q E+ + + +L SA +G+ S+++ + + + +FN + ++ FA
Sbjct: 414 --PNKLQSPQRKIEALLARDVLLKESAQRGFVSYIK--SVFLMKDKEVFNVRALNTDLFA 469
Query: 870 KSFALRDAPSV 880
+S L P +
Sbjct: 470 RSLGLAIPPRI 480
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L + +R DG+ A+
Sbjct: 58 NYIAMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVLEIL--YCKQWTRLDGLGAL 115
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
+I PTRELA Q E K+ + I + GG+ +K EK R+ + +I++ TPGRLL
Sbjct: 116 VITPTRELAYQIYETLRKVGRHHD-ISAGLIIGGKDLKFEKRRMDQ-CNIVICTPGRLLQ 173
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
H ++ LVLDEADR LD G+E+ + +E L P+ Q++L SAT T +
Sbjct: 174 HMDENPLFDCINMQVLVLDEADRCLDMGFEQTMNSIIENL---PPKRQTLLFSATQTKS 229
>gi|13514831|ref|NP_004389.2| probable ATP-dependent RNA helicase DDX10 [Homo sapiens]
gi|76803554|sp|Q13206.2|DDX10_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
gi|11414894|dbj|BAB18536.1| RNA helicase [Homo sapiens]
gi|60552874|gb|AAH91521.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|62739421|gb|AAH93654.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|62739423|gb|AAH93656.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|119587526|gb|EAW67122.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, isoform CRA_a [Homo
sapiens]
gi|189054819|dbj|BAG37650.1| unnamed protein product [Homo sapiens]
Length = 875
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 257/484 (53%), Gaps = 51/484 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
+G +LL L+PSE +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKLID-------- 449
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+Q ES + Q + L A + + S+VR + Y + +F+ ++ + +A S L
Sbjct: 450 -VQKKLESILAQDQDLKERAQRCFVSYVR--SVYLMKDKEVFDVSKLPIPEYALSLGLAV 506
Query: 877 APSV 880
AP V
Sbjct: 507 APRV 510
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQT 257
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|1142710|gb|AAC50823.1| similar to DEAD box RNA helicases [Homo sapiens]
gi|1589113|prf||2210303A RNA helicase
Length = 875
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 261/494 (52%), Gaps = 55/494 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAV 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 240 IENLPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + ++ L SF+ + K +VF ++ Y + L ++
Sbjct: 290 QNYIVCELQQKISVLYSFLRSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGVS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR +G +LL L+PSE +V++L +++ ++EIK+ + +L
Sbjct: 402 RAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKL 447
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
D +Q ES + Q + L A + + S+VR + Y + +F+ ++ +
Sbjct: 448 ID---------VQKKLESILAQDQDLKERAQRCFVSYVR--SVYLMKDKEVFDVSKLPIP 496
Query: 867 HFAKSFALRDAPSV 880
+A S L AP V
Sbjct: 497 EYALSLGLAVAPRV 510
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQT 257
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|432106970|gb|ELK32488.1| Putative ATP-dependent RNA helicase DDX10 [Myotis davidii]
Length = 836
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 267/508 (52%), Gaps = 58/508 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 33 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 87
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 88 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 144
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 145 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 203
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 204 IENLPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 253
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 254 QNYIVCQLQQKISVLYSFLKSHLK-------KKSIVFFSSCKEVQYLFRVFCR-LRPGIS 305
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 306 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 365
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR +G +LL L+PSE K +V++L R++ ++EIK+ + +
Sbjct: 366 RAGRTARYKEDGEALLILLPSEEKGMVQQLLQRKVPVKEIKI--------------NPEK 411
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
L D +Q ES + Q + L A + + S++R + Y + IF+ ++ +
Sbjct: 412 LID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVSKLPI 460
Query: 866 GHFAKSFALRDAPSV--ISGIGKPKNKE 891
+A S L AP V + + K NKE
Sbjct: 461 PEYALSLGLAVAPRVRFLQKMQKQPNKE 488
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 56 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 113
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 114 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 171
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 172 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 221
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 161 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 217
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 218 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCQLQQKISVLYS 270
Query: 296 FI 297
F+
Sbjct: 271 FL 272
>gi|121699880|ref|XP_001268205.1| DEAD box RNA helicase (Hca4), putative [Aspergillus clavatus NRRL
1]
gi|134034070|sp|A1CTZ2.1|DBP4_ASPCL RecName: Full=ATP-dependent RNA helicase dbp4
gi|119396347|gb|EAW06779.1| DEAD box RNA helicase (Hca4), putative [Aspergillus clavatus NRRL
1]
Length = 823
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 259/500 (51%), Gaps = 51/500 (10%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLN--EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSG 441
E L S+E F + P + L+ + +T +Q +I L G DVL ++TGSG
Sbjct: 40 EGLDLKESFESFSDL-PLSEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSG 98
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
KTLA+ +P+++ L R + + DG+ A+I+ PTRELA+Q E+ K+ + T+ +
Sbjct: 99 KTLAFLVPVLENL--YRRQWAEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSA-GLV 155
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
GG+ ++ E+ R+ + ++ILV TPGR+L H T ++ LVLDEADRILD G+++
Sbjct: 156 IGGKSLREEQERLGR-MNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQ 214
Query: 562 DIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVI 621
+ + L K++ Q++L SAT T V LA ++L++P + +H T S
Sbjct: 215 TVDAIVGHLPKER---QTLLFSATQTKKVSDLARLSLRDP------EYVAVHETA-STAT 264
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
P L+QH+++ P +L L SFI + SK +VF ++ + E +
Sbjct: 265 PAKLQQHYVIAPLPQKLDILWSFIRSNLK-------SKTMVFFSSGKQVRFVYESFRH-M 316
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
I LHG Q R ++ F K VL TDVAARGLD P VDW++Q P +
Sbjct: 317 QPGIPLMHLHGRQKQGGRLDIMTNFSQAKHCVLFSTDVAARGLDFPAVDWVIQMDCPEDA 376
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKME 800
Y+HRVGRTAR G +G ++LFL PSE + +++ L+ +++ IE+I +K Q + +++
Sbjct: 377 DTYIHRVGRTARYGRDGRAVLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQLQ 436
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
M F+ L+ K + S+V+ + Y + + IF
Sbjct: 437 ------------------NMCFKDPELK-----YIGQKAFISYVK--SVYIQKDKEIFKL 471
Query: 861 KQIHLGHFAKSFALRDAPSV 880
K++ L FA S L AP +
Sbjct: 472 KELKLDEFASSLGLPGAPRI 491
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 72 LTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENL--YRRQWAEHDGLGALILSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+++ + + L K++ Q++L SAT T
Sbjct: 188 TALFDTYNLQMLVLDEADRILDLGFQQTVDAIVGHLPKER---QTLLFSATQT 237
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 17/124 (13%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
++ LVLDEADRILD G+++ + + L K++ Q++L SAT T V LA ++L++P
Sbjct: 196 LQMLVLDEADRILDLGFQQTVDAIVGHLPKER---QTLLFSATQTKKVSDLARLSLRDP- 251
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +H T S P L+QH+++ P +L L SFI + SK +V
Sbjct: 252 -----EYVAVHETA-STATPAKLQQHYVIAPLPQKLDILWSFIRSNLK-------SKTMV 298
Query: 315 FMAT 318
F ++
Sbjct: 299 FFSS 302
>gi|296806541|ref|XP_002844080.1| ATP-dependent RNA helicase DBP4 [Arthroderma otae CBS 113480]
gi|238845382|gb|EEQ35044.1| ATP-dependent RNA helicase DBP4 [Arthroderma otae CBS 113480]
Length = 803
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 248/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+II P
Sbjct: 73 LTDIQARGIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGALIISP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 188
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V LA
Sbjct: 189 TAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQTKKVSDLA 245
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P I +H S P +L+QH++VTP +L L SFI +
Sbjct: 246 RLSLRDPEYIS------VHEAASS-ATPSTLQQHYVVTPLPDKLDTLWSFIRSSLK---- 294
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I LHG Q R ++ F + K+ L
Sbjct: 295 ---SKIIVFFSSSKEVRFVYEAFRQ-MQPGIPLLHLHGRQKQGARVDITHKFSTSKNSCL 350
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TDV ARGLD P VDW++Q P S Y+HRVGRTAR +G ++LFL PS E+ ++
Sbjct: 351 FATDVVARGLDFPAVDWVIQLDCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEIGMLS 410
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE+I ++ Q + +++ M F+ L K L
Sbjct: 411 RLEQKKIPIEKINIRANKQQSIKHQLQ------------------NMCFKDPQL--KYL- 449
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K +TS+V+ + + + + +F+ K + L FA S L AP +
Sbjct: 450 --GQKAFTSYVK--SIHIQKDKEVFDVKALPLEEFAASLGLPGAPRI 492
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+II P
Sbjct: 73 LTDIQARGIPHALQGRDILGAAKTGSGKTLAFLVPVLENL--FRKQWTEYDGLGALIISP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAIQIFEVLRKIGRYHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 188
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T
Sbjct: 189 TAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFSATQT 238
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++ LVLDEADRI+D G++ + +E L K++ Q++L S
Sbjct: 178 TPGRMLQHMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKER---QTMLFS 234
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L++P I +H S P +L+QH++VTP +L L S
Sbjct: 235 ATQTKKVSDLARLSLRDPEYI------SVHEAASS-ATPSTLQQHYVVTPLPDKLDTLWS 287
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 288 FIRSSLK-------SKIIVFFSS 303
>gi|291383932|ref|XP_002708524.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Oryctolagus
cuniculus]
Length = 872
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLYSFLRSHLK-------KKSIVFFSSCKEVQYLFRVFCR-LRPGISILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F K+ VL TD+AARGLD P V+W++QY P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQYDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLMD------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + +F+ ++ + +A S L
Sbjct: 451 --VQKRLESFLAQDRDLKERAQRCFVSYIR--SVYLMKDKEVFDVSKLPIPEYALSLGLA 506
Query: 876 DAPSV 880
AP V
Sbjct: 507 VAPRV 511
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|126324314|ref|XP_001375375.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Monodelphis domestica]
Length = 599
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 265/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
++E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 AWETLPVPLHPRVLAALRE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I+Q L + K+ +K + A+II PTRELA+Q E+ K F L GG
Sbjct: 67 ILQILLKREEKL-KKMQVGAIIITPTRELAIQINEVLLHFSKHFPQFSQILLIGGRNPGE 125
Query: 510 EKARIR-KGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R + +G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKEQGGNIIVATPGRLEDMFRRKAEGLDLANCVKSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + +T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ QN ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL----QN---HKQEKHLVFFSTCACVEYYGKALEALI-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
N +HG M + +R ++F FR+++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 NAKIMCIHGKM-KYKRNKIFMEFRNLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E V L N++ ++E+K + +LL
Sbjct: 352 FVHRCGRTARIGHTGSALVFLLPMEESYVNFLSINQKCPLQEMKPQKNPADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S V+ YA + +L IF K
Sbjct: 406 -------QLKSMALADRAVFEKGM-----------KAFVSCVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 141/327 (43%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI+Q L + K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILQILLKREEKL-KKMQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRLLDHCK 124
TRELA+Q E+ K F L GG + R + +G +I+VATPGRL
Sbjct: 91 TRELAIQINEVLLHFSKHFPQFSQILLIGGRNPGEDVERFKEQGGNIIVATPGRL----- 145
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
E + K E L L + LD
Sbjct: 146 --EDMFRRKAEGLDLANCVKSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP++I + +T P L+ +++V + L F+ QN
Sbjct: 212 LVRAGLRNPVRISVKEKGVAATSTQK--TPSRLENYYMVCKADEKFNQLVHFL----QN- 264
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
++ K LVF +T +Y+ + L
Sbjct: 265 --HKQEKHLVFFSTCACVEYYGKALEA 289
>gi|302845521|ref|XP_002954299.1| hypothetical protein VOLCADRAFT_76220 [Volvox carteri f.
nagariensis]
gi|300260504|gb|EFJ44723.1| hypothetical protein VOLCADRAFT_76220 [Volvox carteri f.
nagariensis]
Length = 485
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 259/474 (54%), Gaps = 52/474 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T VQ +I +L G DVL ++TGSGKTLA+ +P + L R K ++G A
Sbjct: 1 MGYTHLTEVQARTIPALLTGRDVLGAARTGSGKTLAFLVPCAELL--YRAKFMPRNGTGA 58
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
VII PTRELALQ + L K T + GG ++E ++ KG+++LV+TPGRLL
Sbjct: 59 VIISPTRELALQIYGVARDLFKYHTQ-THGIVMGGANRRTEAEKLVKGVNLLVSTPGRLL 117
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F + LV+DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T
Sbjct: 118 DHLQNTRGFVFRNLACLVIDEADRILEIGFEEEMRQIIKILPKER---QTMLFSATQTTK 174
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++ ++ P+ + D S+ + L+Q + V P + + L +F+
Sbjct: 175 VEDLARISFKHKPLYVGVDDGR-------SVATREGLEQGYCVVPADKKFLLLFTFLK-- 225
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N N+ K++VF ++ + +H+ELL+ + +I +HG Q +RT F F
Sbjct: 226 -KNANK----KVMVFFSSCNSVKFHSELLNYI---DIPVKDIHGKQKQQKRTTTFFEFCQ 277
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE--GSSLLFLIP 766
+ G+L+CTDVAARGLD+P VDWI+Q+ P +Y+HRVGRTAR G E G +LL L+P
Sbjct: 278 AEKGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTAR-GKEGRGRALLLLLP 336
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L++ ++ + E S+LA+ +Q E V
Sbjct: 337 EELGFLRYLKDAKVPLNEYDFP--------------ASKLAN---------VQSQLERLV 373
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA + S + Y S+S L+ IFN ++ L A+SF P V
Sbjct: 374 EKNYYLHQSAKDAFRSTILAYNSHS--LKEIFNVHRLDLQAVARSFGFSVPPRV 425
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T VQ +I +L G DVL ++TGSGKTLA+ +P + L R K ++G A
Sbjct: 1 MGYTHLTEVQARTIPALLTGRDVLGAARTGSGKTLAFLVPCAELL--YRAKFMPRNGTGA 58
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
VII PTRELALQ + L K T + GG ++E ++ KG+++LV+TPGRLL
Sbjct: 59 VIISPTRELALQIYGVARDLFKYHTQ-THGIVMGGANRRTEAEKLVKGVNLLVSTPGRLL 117
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F + LV+DEADRIL+ G+E ++ + ++IL K++ Q++L SAT T
Sbjct: 118 DHLQNTRGFVFRNLACLVIDEADRILEIGFEEEMRQIIKILPKER---QTMLFSATQT 172
>gi|255718187|ref|XP_002555374.1| KLTH0G07766p [Lachancea thermotolerans]
gi|238936758|emb|CAR24937.1| KLTH0G07766p [Lachancea thermotolerans CBS 6340]
Length = 764
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 257/486 (52%), Gaps = 49/486 (10%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T +Q++SI L G D+L ++TGSGKTLA+ IP+I+KL R K + DG+ A+II
Sbjct: 63 KMTEIQKMSIPVSLKGHDLLAAAKTGSGKTLAFLIPVIEKL--YREKWTEFDGLGALIIS 120
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA+QT E+ TK+ + +T + GG+++K E RI K I+ILV TPGR+L H
Sbjct: 121 PTRELAMQTYEVLTKIGR-YTSFSAGLVIGGKEVKFELDRISK-INILVGTPGRILQHMD 178
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + ++ L
Sbjct: 179 QAVGLNTSNLQVLVLDEADRCLDMGFKKTLDAIVMNLP---PVRQTLLFSATQSQSLADL 235
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQN 651
A ++L + + A+ D N++ PD+L+Q +I +L L SFI KC
Sbjct: 236 ARLSLTDYKSVGTAEVKDDSNSS---ATPDTLQQSYISVELPDKLDILFSFIKTHLKC-- 290
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
KM+VF+++ + E L I+ LHG Q+ RTE F +
Sbjct: 291 -------KMIVFLSSSKQVHFVYETFRK-LQPGISLMHLHGRQKQTARTETLDKFSRAQH 342
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK- 770
L TDV ARG+D P VDW+VQ P + Y+HRVGR+AR G +G SL+ L P E +
Sbjct: 343 TCLFATDVVARGIDFPAVDWVVQADCPENVDTYIHRVGRSARYGKQGKSLVMLTPQEEEG 402
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
++ L+ R I N L++K ++ +++ +S + Q
Sbjct: 403 FLKRLKQRHIE----------PNKLTIK-------------QSRKKSIKPQLQSLLFQDP 439
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKN 889
L K + S+VR + + + + +F F+++ FA S L AP + + G+ +
Sbjct: 440 ELKYLGQKAFISYVR--SIFIQKDKEVFKFEELPTEEFANSLGLPGAPKIKMKGMKSVEK 497
Query: 890 KEELKN 895
+ELKN
Sbjct: 498 AKELKN 503
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 111/172 (64%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q++SI L G D+L ++TGSGKTLA+ IP+I+KL R K + DG+ A+II
Sbjct: 63 KMTEIQKMSIPVSLKGHDLLAAAKTGSGKTLAFLIPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+QT E+ TK+ + +T + GG+++K E RI K I+ILV TPGR+L H
Sbjct: 121 PTRELAMQTYEVLTKIGR-YTSFSAGLVIGGKEVKFELDRISK-INILVGTPGRILQHMD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT
Sbjct: 179 QAVGLNTSNLQVLVLDEADRCLDMGFKKTLD---AIVMNLPPVRQTLLFSAT 227
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT + ++ LA ++
Sbjct: 183 LNTSNLQVLVLDEADRCLDMGFKKTLD---AIVMNLPPVRQTLLFSATQSQSLADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + A+ D N++ PD+L+Q +I +L L SFI KC
Sbjct: 240 LTDYKSVGTAEVKDDSNSS---ATPDTLQQSYISVELPDKLDILFSFIKTHLKC------ 290
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 291 ---KMIVFLSS 298
>gi|351698563|gb|EHB01482.1| ATP-dependent RNA helicase DDX55 [Heterocephalus glaber]
Length = 600
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 261/509 (51%), Gaps = 50/509 (9%)
Query: 386 LFAPTSYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
L S+E P +HP + L E + T VQ +I + DV + TGSGKTL
Sbjct: 3 LVTEGSWESLPVPLHPQVLGALRE-LGFRYTTPVQSATIPLFMKNKDVAAEAVTGSGKTL 61
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
A+ IPI++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 62 AFVIPILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGG 120
Query: 505 EKMKSEKARI-RKGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQG 558
+ R R+G +I+VATPGRL D + E L + ++ LVLDEADR+LD G
Sbjct: 121 RNPGEDVERFKRQGGNIIVATPGRLEDMFRREAEGLALASCVRTLDVLVLDEADRLLDMG 180
Query: 559 YERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS 618
+E I LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T
Sbjct: 181 FEASINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK 237
Query: 619 LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 678
P L +++V + L F+ ++ K LVF +T +Y+ + L
Sbjct: 238 --TPSRLHNYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALE 288
Query: 679 TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
T++ + + +HG M + +R ++F FR+++SG+L+CTDV ARG+D+P V+W++QY P
Sbjct: 289 TLV-KGVKIMCIHGKM-KYKRNKIFMDFRTLQSGILVCTDVMARGIDIPEVNWVLQYDPP 346
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSV 797
SS++ +VHR GRTAR GH GS+L+FL+P E V L N++ ++E + + + NLL
Sbjct: 347 SSASAFVHRCGRTARFGHGGSALVFLLPMEEAYVSFLDINQKCPLQETRRQGNVANLLP- 405
Query: 798 KMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
++ A A + FE + + + S V+ YA + +L I
Sbjct: 406 ------------KLQAMALADRAVFEKGM-----------RAFVSHVQAYAKHECNL--I 440
Query: 858 FNFKQIHLGHFAKSFALRDAPSVISGIGK 886
F K + A+ FAL P + GK
Sbjct: 441 FRLKDLDFASLARGFALLRMPRMPELKGK 469
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 139/332 (41%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFRYTTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARI-RKGISILVATPGRL 119
+II PTRELA+Q E+ + K F GG + R R+G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVERFKRQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + + E L L R LD
Sbjct: 146 EDMFRR-------EAEGLALASCVRTLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLHNYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
++ K LVF +T +Y+ + L T
Sbjct: 263 -----RNHKQEKHLVFFSTCACVEYYGKALET 289
>gi|307197823|gb|EFN78934.1| Probable ATP-dependent RNA helicase pitchoune [Harpegnathos
saltator]
Length = 431
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 238/426 (55%), Gaps = 47/426 (11%)
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTREL++QT + +L K + L GG ++E ++ KG++I+VA
Sbjct: 3 RNGTGCIIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLAKGVNIIVA 61
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T + ++ LV+DEADRILD G+E ++ + + +L K++ Q++L S
Sbjct: 62 TPGRLLDHLQNTPDFMYKNLQCLVIDEADRILDIGFEEEMKQIINLLPKRR---QTMLFS 118
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T V L + ++ PI + D + ++L+Q ++V P R + L
Sbjct: 119 ATQTEKVTMLTKLAIKKEPIYVGVDDDKEKATV-------ENLEQGYLVCPSDKRFMLLF 171
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++++ K++VF ++ YH ELL+ + ++ +HG Q +RT
Sbjct: 172 TFLK-------KNKKKKIMVFFSSCMSVKYHHELLNYI---DLPVMSIHGRQKQIKRTNT 221
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F F SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G++G++LL
Sbjct: 222 FYQFCRADSGILLCTDVAARGLDIPNVDWIVQYDPPDDPKEYIHRVGRTARAGNKGNALL 281
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L P E+ ++ L+ R+ + E ++ + ++++D +Q+
Sbjct: 282 LLRPEELGMIYYLKQARVPLREYEISN--------------NKISD---------IQLQL 318
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E + + LHTSA + + ++VR Y S+ L+ IFN + ++L AKSF P+V
Sbjct: 319 EKLISKNYYLHTSAKEAFKAYVRAYDSHH--LKQIFNIETLNLTAVAKSFGFTVPPTVDL 376
Query: 883 GIGKPK 888
+G K
Sbjct: 377 KVGVSK 382
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
++G +II PTREL++QT + +L K + L GG ++E ++ KG++I+VA
Sbjct: 3 RNGTGCIIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLAKGVNIIVA 61
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRLLDH ++T + ++ LV+DEADRILD G+E ++ + + +L K++ Q++L S
Sbjct: 62 TPGRLLDHLQNTPDFMYKNLQCLVIDEADRILDIGFEEEMKQIINLLPKRR---QTMLFS 118
Query: 175 ATLT 178
AT T
Sbjct: 119 ATQT 122
>gi|160380697|sp|Q0CMM5.2|DBP4_ASPTN RecName: Full=ATP-dependent RNA helicase dbp4
Length = 804
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 247/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q ++ L G D+L ++TGSGKTLA+ IP+++ L R + + DG+ A+I+ P
Sbjct: 69 LTDIQSRAVSHALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKQWAEHDGLGALILSP 126
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + + + GG+ +K E+ R+ K ++ILV TPGR+L H
Sbjct: 127 TRELAIQIFEVLRKVGR-YHHFSAGLVIGGKSLKEEQERLGK-MNILVCTPGRMLQHLDQ 184
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G+++ + + L K++ Q++L SAT T V LA
Sbjct: 185 TALFDTYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPKER---QTMLFSATQTKKVSDLA 241
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H S P +L+QH++VTP +L L SFI +
Sbjct: 242 RLSLQDP------EYVAVHEAAAS-ATPSTLQQHYVVTPLPQKLDILWSFIRSNLK---- 290
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E L I LHG Q R ++ + K VL
Sbjct: 291 ---SKTIVFLSSGKQVRFVYEAFRH-LQPGIPLMHLHGRQKQGGRLDITTKYSQAKHAVL 346
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + +++
Sbjct: 347 FSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEQGMLK 406
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ +E+I +K Q + +++ M F+ L K L
Sbjct: 407 RLEQKKVPVEKINVKANKQQSIKNQLQN------------------MCFKDPEL--KYL- 445
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + Y + + IF K + L FA S L AP +
Sbjct: 446 --GQKAFISYVK--SVYVQKDKEIFKLKDLDLEEFASSLGLPGAPRI 488
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q ++ L G D+L ++TGSGKTLA+ IP+++ L R + + DG+ A+I+ P
Sbjct: 69 LTDIQSRAVSHALKGRDILGAAKTGSGKTLAFLIPVLENL--YRKQWAEHDGLGALILSP 126
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + + + GG+ +K E+ R+ K ++ILV TPGR+L H
Sbjct: 127 TRELAIQIFEVLRKVGR-YHHFSAGLVIGGKSLKEEQERLGK-MNILVCTPGRMLQHLDQ 184
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRI+D G+++ + + L K++ Q++L SAT T
Sbjct: 185 TALFDTYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPKER---QTMLFSATQT 234
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 17/124 (13%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
++ LVLDEADRI+D G+++ + + L K++ Q++L SAT T V LA ++LQ+P
Sbjct: 193 LQMLVLDEADRIMDMGFQKTVDAIIGHLPKER---QTMLFSATQTKKVSDLARLSLQDP- 248
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +H S P +L+QH++VTP +L L SFI + SK +V
Sbjct: 249 -----EYVAVHEAAAS-ATPSTLQQHYVVTPLPQKLDILWSFIRSNLK-------SKTIV 295
Query: 315 FMAT 318
F+++
Sbjct: 296 FLSS 299
>gi|354491440|ref|XP_003507863.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Cricetulus griseus]
gi|344248742|gb|EGW04846.1| ATP-dependent RNA helicase DDX55 [Cricetulus griseus]
Length = 600
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 257/496 (51%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPRVLSALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIVEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKSQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + +E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKSEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + N+T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAANSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 249 CKADEKFNQLVHFL-------RNHQQEKHLVFFSTCACVEYYGKALEVLL-KRVKTLCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTVDLLP-------------K 406
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 407 LRAMAMADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFASLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLRMPRMPELRGK 469
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 148/340 (43%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIVEILLRREEKL-KKSQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGR
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR- 144
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
LE + ++K S L
Sbjct: 145 --------------------------------------LEDMFRRK--------SEGLDL 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + N+T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAANSTQK--TPSRLENHYMICKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST-KKKIKKL 338
++ K LVF +T +Y+ + L K++K L
Sbjct: 263 -----RNHQQEKHLVFFSTCACVEYYGKALEVLLKRVKTL 297
>gi|70953337|ref|XP_745776.1| DEAD/DEAH box ATP-dependent RNA helicase [Plasmodium chabaudi
chabaudi]
gi|56526204|emb|CAH78677.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
chabaudi chabaudi]
Length = 579
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/503 (31%), Positives = 263/503 (52%), Gaps = 55/503 (10%)
Query: 380 KPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTG 439
K E+ ++ +E+ I +KK L E +N +T +Q I L G D+L ++TG
Sbjct: 116 KNEKESFYSEQKFEDL-DICDALKKGLKE-LNFITLTEIQSKCIPHFLSGKDILGAAKTG 173
Query: 440 SGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPS 499
SGKTLA+ +P I L + K K+G +II PTREL LQ ++ T LCK +
Sbjct: 174 SGKTLAFLVPSINILYNI--KFLPKNGTGVLIISPTRELCLQIYQVCTDLCK-YIPQTNG 230
Query: 500 WLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGY 559
+ GG EK + GI+IL+ATPGRLLDH ++T+ + + L++DEADR+L G+
Sbjct: 231 IIIGGVSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFNYKNLVCLIIDEADRLLQIGF 290
Query: 560 ERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSL 619
E +I ++ L K++ Q+ L SAT T V+ L ++LQ PI I+ T +
Sbjct: 291 EEEINLIVKRLPKKR---QTALFSATQTTKVESLIRLSLQKPIFIEV---------TTKI 338
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 679
+ L+Q + + R + L +F+ + K++VF ++ +LL+
Sbjct: 339 ATVERLQQGYALVDEDKRFLLLFTFL-------KRNPSKKIMVFFNNCMSVQFYNDLLNY 391
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPS 739
+ +I F +HG Q++R + F F + K+ +L+CT+VAARGLD+P V++I+QY P
Sbjct: 392 I---DIPTFCIHGKKKQNQRLKSFNEFSAAKNAILLCTNVAARGLDIPNVNYIIQYDPPD 448
Query: 740 SSTDYVHRVGRTARVGHE--GSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSV 797
S +Y+HRVGRT R G++ GS+++FL+ E+K + L+ I + +
Sbjct: 449 DSKEYIHRVGRTCR-GNDSAGSAIIFLMKHELKFLNYLKFYNIPVNQFAY---------- 497
Query: 798 KMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
D +L + +Q ES V + LH A + + S++ Y +Y+ L+ +
Sbjct: 498 ----DQKKLIN---------IQSQMESIVTKNFHLHKMAREAFKSYLNGYVTYA--LKDV 542
Query: 858 FNFKQIHLGHFAKSFALRDAPSV 880
F+ ++L +K+F L P V
Sbjct: 543 FDINNLNLMLTSKNFGLDTPPKV 565
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N +T +Q I L G D+L ++TGSGKTLA+ +P I L + K K+G
Sbjct: 144 LNFITLTEIQSKCIPHFLSGKDILGAAKTGSGKTLAFLVPSINILYNI--KFLPKNGTGV 201
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL LQ ++ T LCK + + GG EK + GI+IL+ATPGRLL
Sbjct: 202 LIISPTRELCLQIYQVCTDLCK-YIPQTNGIIIGGVSRNEEKKKFIHGINILIATPGRLL 260
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + L++DEADR+L G+E +I ++ L K++ Q+ L SAT T
Sbjct: 261 DHMQNTKEFNYKNLVCLIIDEADRLLQIGFEEEINLIVKRLPKKR---QTALFSATQT 315
>gi|73955178|ref|XP_536583.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Canis lupus
familiaris]
Length = 871
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 256/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP I +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNPEYIW------VHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F +S VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q K L A + + S++R + Y + IF+ + + +A S L
Sbjct: 451 --VQKKLESFLAQDKDLKERAQRCFVSYIR--SVYLMKNKEIFDVSTLPVPEYALSLGLA 506
Query: 876 DAPSV 880
AP V
Sbjct: 507 VAPRV 511
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP I +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNPEYI------WVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|301122737|ref|XP_002909095.1| ATP-dependent RNA helicase dbp4, putative [Phytophthora infestans
T30-4]
gi|262099857|gb|EEY57909.1| ATP-dependent RNA helicase dbp4, putative [Phytophthora infestans
T30-4]
Length = 524
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 250/471 (53%), Gaps = 46/471 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
T T +Q S+ L G DVL ++TGSGKTLA+ +P+++KL R + S +DG+ A+
Sbjct: 78 GFTAPTKIQVGSLPHALAGRDVLAAAKTGSGKTLAFLLPVLEKL--FRLRWSVEDGLGAL 135
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
+I PTRELALQ E+ + K+ + + GG+ + E+ R+ + +++L+ TPGRLL
Sbjct: 136 VIAPTRELALQIFEVLRNVGKAHAFSA-GLVIGGKNFREEQLRLIR-MNLLICTPGRLLQ 193
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H + T S ++ LVLDEADRILD G+++ + LE L + Q++L SAT T +V
Sbjct: 194 HMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGER-QTMLFSATQTKSV 252
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L+ P + +H + + P L+Q ++VTP + +L L SFI +
Sbjct: 253 KDLAALSLREP------EYVAVHEHSAN-ATPKGLQQSYVVTPLERKLDVLLSFIKSHLK 305
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K +VF++T + + L I LHG Q +R EV+ F +
Sbjct: 306 Q-------KTIVFLSTCRQVRFVHSVFCK-LQPGIPLCALHGKYKQGKRVEVYYEFLNKP 357
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+ VL TD+AARGLD P VDW++Q P + +Y+HRVGRTAR +G +L+ L+PSEV
Sbjct: 358 AAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVD 417
Query: 771 -LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
+++ L++ ++ I E KL T ++ + S V
Sbjct: 418 GMMKRLEDAKVPIRETKLNP-----------------------TKTSSCRQKVASVVAGD 454
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + A K + S+VR + Y + R +F+ + L +A+S L AP +
Sbjct: 455 KEIKALAQKAFMSYVR--SVYLQPDREVFDATALPLDAYAESLGLPGAPRM 503
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 18/244 (7%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
T T +Q S+ L G DVL ++TGSGKTLA+ +P+++KL R + S +DG+ A+
Sbjct: 78 GFTAPTKIQVGSLPHALAGRDVLAAAKTGSGKTLAFLLPVLEKL--FRLRWSVEDGLGAL 135
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
+I PTRELALQ E+ + K+ + + GG+ + E+ R+ + +++L+ TPGRLL
Sbjct: 136 VIAPTRELALQIFEVLRNVGKAHAFSA-GLVIGGKNFREEQLRLIR-MNLLICTPGRLLQ 193
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H + T S ++ LVLDEADRILD G+++ + LE L + Q++L SAT T +
Sbjct: 194 HMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGER-QTMLFSATQTKSV 252
Query: 182 CWCKHTETLKFSKVEHLVLDE-----ADRILDQGY-----ERDIAEFLEILKKQKPQFQS 231
K L + E++ + E + L Q Y ER + L +K Q
Sbjct: 253 ---KDLAALSLREPEYVAVHEHSANATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTI 309
Query: 232 VLLS 235
V LS
Sbjct: 310 VFLS 313
>gi|170095563|ref|XP_001879002.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646306|gb|EDR10552.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 654
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 257/486 (52%), Gaps = 51/486 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q S+ L G DVL +QTGSGKTLA+ +P+++ L R K DG+ A+II P
Sbjct: 24 MTDIQTKSLPISLKGKDVLGAAQTGSGKTLAFLVPVLEIL--YRRKWGAADGLGALIISP 81
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ + + + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 82 TRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNLKDERDRLSR-MNILVATPGRLLQHMDQ 139
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G+++ +A L L K + Q++L SAT T +V LA
Sbjct: 140 TVGFDADNLQVLVLDEADRILDMGFQKTLAALLSHLPKSR---QTLLFSATQTQSVSDLA 196
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P+ + ++ +++ S +P +L+QH+++ +L L SFI Q
Sbjct: 197 RLSLKDPVYV----GINVASSSTS-TMPQNLEQHYVICELDKKLDVLWSFIKTHLQ---- 247
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VFM++ + E + + LHG QS R ++ F S+ VL
Sbjct: 248 ---SKIIVFMSSCKQVRFVFETFCK-MHPGVPLLHLHGKQKQSARLTMYTKFSSISHAVL 303
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE- 773
TD+AARGLD P VDW++Q AP + Y+HRVGRTAR +G +LLFL+PSE + ++
Sbjct: 304 FATDIAARGLDFPSVDWVLQMDAPEDADTYIHRVGRTARYESKGKALLFLMPSEEEGMKV 363
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
LQ R I +++IK++ + ++ ++ Q +
Sbjct: 364 ALQKRAIDVKQIKIR-----------------------ASKTQTIENQLQNLAFQDPEIK 400
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
+ + S++R + Y + IF +++ + FA+S L P + K NKE
Sbjct: 401 YLGQRAFVSYLR--SIYIHKDKSIFKLEELPVDRFAESLGLPGTPKI-----KFLNKEIA 453
Query: 894 KNKKMA 899
K KK A
Sbjct: 454 KKKKNA 459
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q S+ L G DVL +QTGSGKTLA+ +P+++ L R K DG+ A+II P
Sbjct: 24 MTDIQTKSLPISLKGKDVLGAAQTGSGKTLAFLVPVLEIL--YRRKWGAADGLGALIISP 81
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ + + + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 82 TRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNLKDERDRLSR-MNILVATPGRLLQHMDQ 139
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+++ +A L L K + Q++L SAT T
Sbjct: 140 TVGFDADNLQVLVLDEADRILDMGFQKTLAALLSHLPKSR---QTLLFSATQT 189
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 17/143 (11%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G+++ +A L L K + Q++L S
Sbjct: 129 TPGRLLQHMDQTVGFDADNLQVLVLDEADRILDMGFQKTLAALLSHLPKSR---QTLLFS 185
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L++P+ + ++ +++ S +P +L+QH+++ +L L S
Sbjct: 186 ATQTQSVSDLARLSLKDPVYV----GINVASSSTS-TMPQNLEQHYVICELDKKLDVLWS 240
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q SK++VFM++
Sbjct: 241 FIKTHLQ-------SKIIVFMSS 256
>gi|299746292|ref|XP_001837876.2| ATP-dependent RNA helicase dbp-4 [Coprinopsis cinerea okayama7#130]
gi|298406988|gb|EAU83976.2| ATP-dependent RNA helicase dbp-4 [Coprinopsis cinerea okayama7#130]
Length = 816
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 261/496 (52%), Gaps = 54/496 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ ++T +Q SI L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A+
Sbjct: 72 SFVKMTDIQAKSIPLSLKGKDVLGAARTGSGKTLAFLIPVLEVL--YRRKWGPTDGLGAL 129
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ + F + GG+ +K E+ R+ + ++ILVATPGRLL
Sbjct: 130 IISPTRELAVQIFEVL-RAIGPFHSFSAGLVIGGKNLKDERDRLSR-MNILVATPGRLLQ 187
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T +V
Sbjct: 188 HMDQTVGFDTDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFSATQTESV 244
Query: 591 QRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
LA ++L++P + + A S+ + IPDSL+QH+++T +L L SFI
Sbjct: 245 SDLARLSLKDPEYVGVKEAGSSGSY-------IPDSLEQHYVITELDKKLDVLWSFIKTH 297
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q SK+LVF+++ + E + + LHG Q+ R ++ F S
Sbjct: 298 LQ-------SKVLVFLSSCKQVRFVFETFCK-MHPGVPLLHLHGKQKQTARLAMYTKFTS 349
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
V+ TD+AARGLD P VDW+VQ AP + Y+HRVGRTAR +G LLFL PSE
Sbjct: 350 HSHAVMFATDIAARGLDFPAVDWVVQVDAPEDAETYIHRVGRTARYESKGKGLLFLCPSE 409
Query: 769 VK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
+ + L + + +++IK++ + ++++ ++ FE +
Sbjct: 410 EEGMTSALTKKGLTVQKIKIRQSKTQNIQLQLQ------------------KLCFEDPEI 451
Query: 828 ----QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
Q+K + + + + S++R + Y + + IF + + +A+S L P +
Sbjct: 452 KYLGQRKGANGNREQAFVSYLR--SIYLQKNKSIFKLDALPVDRYAESLGLPGTPKI--- 506
Query: 884 IGKPKNKEELKNKKMA 899
K N+E K KK A
Sbjct: 507 --KFLNREIAKAKKNA 520
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q SI L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A+
Sbjct: 72 SFVKMTDIQAKSIPLSLKGKDVLGAARTGSGKTLAFLIPVLEVL--YRRKWGPTDGLGAL 129
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ + F + GG+ +K E+ R+ + ++ILVATPGRLL
Sbjct: 130 IISPTRELAVQIFEVL-RAIGPFHSFSAGLVIGGKNLKDERDRLSR-MNILVATPGRLLQ 187
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T
Sbjct: 188 HMDQTVGFDTDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFSATQT 241
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 21/145 (14%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G++R ++ L L K + Q++L S
Sbjct: 181 TPGRLLQHMDQTVGFDTDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFS 237
Query: 236 ATLTPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 293
AT T +V LA ++L++P + + A S+ + IPDSL+QH+++T +L L
Sbjct: 238 ATQTESVSDLARLSLKDPEYVGVKEAGSSGSY-------IPDSLEQHYVITELDKKLDVL 290
Query: 294 ASFILGKCQNVNEDEESKMLVFMAT 318
SFI Q SK+LVF+++
Sbjct: 291 WSFIKTHLQ-------SKVLVFLSS 308
>gi|145530157|ref|XP_001450856.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418489|emb|CAK83459.1| unnamed protein product [Paramecium tetraurelia]
Length = 696
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 262/472 (55%), Gaps = 51/472 (10%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T +Q+ I L D+L S+TGSGKTL+Y +P+I+ L K + DG+ A+IIL
Sbjct: 78 KMTEIQRCVIPHALAERDILGASKTGSGKTLSYLLPLIENL--YVNKWTPLDGLGALIIL 135
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA+Q E+F L ++ + + L GG+ + E+ RI G+++++ TPGRLL H +
Sbjct: 136 PTRELAMQVFEVFKSL-NTYHILSMALLIGGKNYQYERDRI-TGMNVIICTPGRLLQHFE 193
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
+ + ++ LVLDEAD +L+ G+ + + L K+K Q++L SATL + +L
Sbjct: 194 ESPGFDANNLKVLVLDEADMMLELGFWGPLKAIMNYLPKEK---QTMLFSATLNQTIHQL 250
Query: 594 AGMTLQNP--IQIDAADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
++LQNP I + +TD + TD+++ P+ L+Q +IVTP + ++ L SFI K
Sbjct: 251 CKISLQNPESIFLHEKLATDSNEQTDNVMSTPNKLQQFYIVTPIEEKIDVLFSFI--KSH 308
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTV-LGENIAFFKLHGSMSQSERTEVFKTFRSV 709
N + K+++F++T Y E+ + LG + ++LHG Q +RT +F TF
Sbjct: 309 N-----KQKIVIFVSTCKQVRYLFEVFRKLKLG--MLLYELHGRQKQDKRTAIFFTFSEK 361
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV 769
K+ L T++A+RGLD P VDW++Q+ P + YVHRVGRTAR G S+LFL+PSEV
Sbjct: 362 KAAALFTTNIASRGLDFPKVDWVIQFDCPDDPSTYVHRVGRTARYIAGGFSMLFLLPSEV 421
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
K +++++ + + I++ L Q L++K + L N+E
Sbjct: 422 KFIDKVKQKGVEIKQKFLNSNKQ--LTIKQ--TIQSLVSENIE----------------- 460
Query: 830 KILHTSACKGYTSWVRFYASYSKDL---RHIFNFKQIHLGHFAKSFALRDAP 878
L A + + S+VR S D+ + IF K+I A+S L P
Sbjct: 461 --LKYLAQRAFISYVR-----SVDINADKEIFKLKEIKTDLLAESMGLVQVP 505
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ I L D+L S+TGSGKTL+Y +P+I+ L K + DG+ A+IIL
Sbjct: 78 KMTEIQRCVIPHALAERDILGASKTGSGKTLSYLLPLIENL--YVNKWTPLDGLGALIIL 135
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+F L ++ + + L GG+ + E+ RI G+++++ TPGRLL H +
Sbjct: 136 PTRELAMQVFEVFKSL-NTYHILSMALLIGGKNYQYERDRI-TGMNVIICTPGRLLQHFE 193
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ + ++ LVLDEAD +L+ G+ + + L K+K Q++L SATL
Sbjct: 194 ESPGFDANNLKVLVLDEADMMLELGFWGPLKAIMNYLPKEK---QTMLFSATLN 244
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNP--IQ 255
LVLDEAD +L+ G+ + + L K+K Q++L SATL + +L ++LQNP I
Sbjct: 206 LVLDEADMMLELGFWGPLKAIMNYLPKEK---QTMLFSATLNQTIHQLCKISLQNPESIF 262
Query: 256 IDAADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +TD + TD+++ P+ L+Q +IVTP + ++ L SFI K N + K+++
Sbjct: 263 LHEKLATDSNEQTDNVMSTPNKLQQFYIVTPIEEKIDVLFSFI--KSHN-----KQKIVI 315
Query: 315 FMATQDMADYHTELL 329
F++T Y E+
Sbjct: 316 FVSTCKQVRYLFEVF 330
>gi|149631935|ref|XP_001509692.1| PREDICTED: probable ATP-dependent RNA helicase DDX10
[Ornithorhynchus anatinus]
Length = 859
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 72 PLSKKTL-KGLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLESL-- 128
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI +
Sbjct: 129 YRQQWTSMDGLGVLIISPTRELAYQTFEVLRKVGKNHEFSA-GLIIGGKDLKQESERINQ 187
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+IL+ TPGRLL H T S ++ LVLDEADRILD G+ + +E L +++
Sbjct: 188 -INILICTPGRLLQHMDETTYFHASNLQMLVLDEADRILDMGFADTMNAIIENLPRKR-- 244
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q++IV +
Sbjct: 245 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLEQNYIVCELQQ 296
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 297 KINMLYSFLRSHLKK-------KSIVFFSSCKEVQYLFRVFCR-LRPGLSILALHGKQQQ 348
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F KS VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 349 MKRMEVYNDFVRKKSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 408
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL L+PSE K +V++L +++ + EIK+ + +L D
Sbjct: 409 GGEALLVLLPSEEKGMVQQLTQKKVPVNEIKI--------------NPEKLVD------- 447
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q E+ + Q + L A + + S++R + Y + +FN ++ L +A S L
Sbjct: 448 --IQKRLEAFLAQDQELKERAQRCFVSYLR--SVYLMKNKEVFNVNKLPLAEYALSLGLA 503
Query: 876 DAPSV 880
AP V
Sbjct: 504 VAPRV 508
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 89 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLESL--YRQQWTSMDGLGVLIISP 146
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI + I+IL+ TPGRLL H
Sbjct: 147 TRELAYQTFEVLRKVGKNHEFSA-GLIIGGKDLKQESERINQ-INILICTPGRLLQHMDE 204
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ + +E L +++ Q++L SAT T
Sbjct: 205 TTYFHASNLQMLVLDEADRILDMGFADTMNAIIENLPRKR---QTLLFSATQT 254
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ LVLDEADRILD G+ + +E L +++ Q++L S
Sbjct: 194 TPGRLLQHMDETTYFHASNLQMLVLDEADRILDMGFADTMNAIIENLPRKR---QTLLFS 250
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++IV + ++ L S
Sbjct: 251 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLEQNYIVCELQQKINMLYS 303
Query: 296 FI 297
F+
Sbjct: 304 FL 305
>gi|221057708|ref|XP_002261362.1| DEAD/DEAH box ATP dependent DNA helicase [Plasmodium knowlesi
strain H]
gi|194247367|emb|CAQ40767.1| DEAD/DEAH box ATP dependent DNA helicase,putative [Plasmodium
knowlesi strain H]
Length = 605
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 270/514 (52%), Gaps = 54/514 (10%)
Query: 368 NPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPIL 427
N D+ N P+ E ++ T +++ I +KK L E +N +T +Q I L
Sbjct: 131 NGDV-NPPSSSKVEKKETFYSETKFDDL-DICEALKKGLKE-LNFVTLTEIQAKCIPHFL 187
Query: 428 DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFT 487
+G D+L ++TGSGKTLA+ +P I L + K K+G +II PTREL LQ ++
Sbjct: 188 NGKDILGAAKTGSGKTLAFLVPSINILYNI--KFLPKNGTGVLIISPTRELCLQIYQVCK 245
Query: 488 KLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLV 547
LCK + + GG EK + GI+IL+ATPGRLLDH ++T+ + + L+
Sbjct: 246 DLCK-YIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFIYKNLISLI 304
Query: 548 LDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAA 607
+DEADR+L G+E +I ++ L K++ Q+ L SAT T V+ L ++LQ PI I+
Sbjct: 305 IDEADRLLQIGFEEEINLIVKRLPKKR---QTALFSATQTTKVENLIRLSLQKPIFIEV- 360
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQ 667
T + + L+Q + + R + L +F+ +N+++ K++VF
Sbjct: 361 --------TTKIATVERLQQGYALVDEDKRFLLLFTFLK---RNISK----KIMVFFNNC 405
Query: 668 DMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLP 727
++ +LL+ + +I F +HG Q++R + F F + +S +L+CT+VAARGLD+P
Sbjct: 406 MSVQFYNDLLNYI---DIPTFCIHGKKKQNKRLKSFSEFSAAQSAILLCTNVAARGLDIP 462
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
V++I+QY P S +Y+HRVGRT R GS+++FL+ E+K + L+ I I +
Sbjct: 463 NVNYIIQYDPPDDSKEYIHRVGRTCRGKDSNGSAIIFLMKHELKFLNYLKFYNIPINQFA 522
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
D S+L + +Q ES V + LH A + + S++
Sbjct: 523 Y--------------DPSKLIN---------VQSHIESIVTKNFHLHKMAREAFKSYLNG 559
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Y +Y+ L+ +F+ ++L +K+F L P V
Sbjct: 560 YITYA--LKDVFDVNNLNLLQTSKNFGLEAPPKV 591
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N +T +Q I L+G D+L ++TGSGKTLA+ +P I L + K K+G
Sbjct: 170 LNFVTLTEIQAKCIPHFLNGKDILGAAKTGSGKTLAFLVPSINILYNI--KFLPKNGTGV 227
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL LQ ++ LCK + + GG EK + GI+IL+ATPGRLL
Sbjct: 228 LIISPTRELCLQIYQVCKDLCK-YIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLL 286
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + L++DEADR+L G+E +I ++ L K++ Q+ L SAT T
Sbjct: 287 DHMQNTKEFIYKNLISLIIDEADRLLQIGFEEEINLIVKRLPKKR---QTALFSATQT 341
>gi|410976502|ref|XP_003994659.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Felis catus]
Length = 600
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 264/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPMRLHPRVLGALRE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
+++ L K+ +K + A+II PTRELA+Q E+ + F GG
Sbjct: 67 VLEILLRREEKL-KKHQVGALIITPTRELAIQIDEVLAHFTRPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIR-KGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R + +G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
LK +++V + L F+ ++ K L+F +T +Y+ + L +++ +
Sbjct: 241 RLKNYYMVCKADEKFNQLVHFL-------RNHKQEKHLIFFSTCACVEYYGKALESLV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PSS++
Sbjct: 293 GVKIMCIHGKM-KHKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E V L+ N++ ++E++L+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYVSFLEINQKCPLQEMQLQKNTGDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECGL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 140/332 (42%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IP+++ L K+ +K + A
Sbjct: 27 LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPVLEILLRREEKL-KKHQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ + F GG + R + +G +I+VATPGRL
Sbjct: 86 LIITPTRELAIQIDEVLAHFTRPFPQFSQILWIGGRNPGEDVERFKEQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVRSLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P LK +++V + L F+
Sbjct: 207 QEVESLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLKNYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
++ K L+F +T +Y+ + L +
Sbjct: 263 -----RNHKQEKHLIFFSTCACVEYYGKALES 289
>gi|388857725|emb|CCF48619.1| probable HCA4-can suppress the U14 snoRNA rRNA processing function
[Ustilago hordei]
Length = 910
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 247/471 (52%), Gaps = 51/471 (10%)
Query: 413 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T +T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A++I
Sbjct: 79 TDMTGIQAKSLPLSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPSDGLGALVI 136
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA+Q E+ K+ T+ + GG+ +K EK R+ + ++ILVATPGRLL H
Sbjct: 137 SPTRELAIQIFEVLRKIGPYHTFSA-GLVIGGKDVKQEKDRLSR-VNILVATPGRLLQHM 194
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
T S ++ LVLDEADRILD G+ R + +E L + + Q++L SAT T V+
Sbjct: 195 DQTLGFDTSNLQMLVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLFSATQTKRVKD 251
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQ 650
LA ++LQ+ A+ + + + P L+QH+++ + +L L SFI KC
Sbjct: 252 LARLSLQD------AEYVALGDAEKEVSTPKGLEQHYMLVDLEKKLDLLFSFIRTHTKC- 304
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K LVFM++ + E L ++ LHG Q++R ++F F +
Sbjct: 305 --------KALVFMSSCRQVQFVHETFCK-LRPGVSLMALHGKQKQAKRLQIFTQFTKTQ 355
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+L TD+AARGLD P VDW++Q P Y+HRVGRTAR +G+SLL ++PSE K
Sbjct: 356 HALLFATDIAARGLDFPAVDWVIQLDVPEDVDTYIHRVGRTARYTAKGNSLLLVLPSEEK 415
Query: 771 -LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++E L + I I IK K E+ ++Q ++ Q+
Sbjct: 416 GVLEALATKNIPIGRIKPK-----------------------ESKTQSIQNQLQAFAFQE 452
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ A K + S+VR + Y + + IF+ + L FA + L AP V
Sbjct: 453 AQIKHLAQKAFVSYVR--SIYLQKNKEIFDVTALPLEPFAAALGLPGAPKV 501
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 10/202 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T +T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A++I
Sbjct: 79 TDMTGIQAKSLPLSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPSDGLGALVI 136
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+Q E+ K+ T+ + GG+ +K EK R+ + ++ILVATPGRLL H
Sbjct: 137 SPTRELAIQIFEVLRKIGPYHTFSA-GLVIGGKDVKQEKDRLSR-VNILVATPGRLLQHM 194
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCW 183
T S ++ LVLDEADRILD G+ R + +E L + + Q++L SAT T
Sbjct: 195 DQTLGFDTSNLQMLVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLFSAT---QTKR 248
Query: 184 CKHTETLKFSKVEHLVLDEADR 205
K L E++ L +A++
Sbjct: 249 VKDLARLSLQDAEYVALGDAEK 270
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 22/145 (15%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +TL F S ++ LVLDEADRILD G+ R + +E L + + Q++L S
Sbjct: 186 TPGRLLQHMDQTLGFDTSNLQMLVLDEADRILDMGFSRTLNAIVENLPRDR---QTMLFS 242
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V+ LA ++LQ+ A+ + + + P L+QH+++ + +L L S
Sbjct: 243 ATQTKRVKDLARLSLQD------AEYVALGDAEKEVSTPKGLEQHYMLVDLEKKLDLLFS 296
Query: 296 FIL--GKCQNVNEDEESKMLVFMAT 318
FI KC K LVFM++
Sbjct: 297 FIRTHTKC---------KALVFMSS 312
>gi|320593758|gb|EFX06167.1| dead box RNA helicase [Grosmannia clavigera kw1407]
Length = 857
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/516 (31%), Positives = 262/516 (50%), Gaps = 56/516 (10%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
PT++ + P P K L + + +T +Q +I L G D+L ++TGSGKTLA+ +
Sbjct: 50 PTNFSDVPLSEP-TKMGLRDS-HFETLTDIQSKAIPAALRGCDILGAAKTGSGKTLAFLV 107
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
P+++KL R + + DG+ A+II PTREL++Q E+ K+ + + + GG+ +K
Sbjct: 108 PVLEKL--YRARWTEYDGLGALIISPTRELSVQIFEVLRKVGRHHRFSA-GLVIGGKSLK 164
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E R+ + ++ILV TPGR+L H T +L+ + ++ LVLDEADRI+D G++ + +E
Sbjct: 165 EEAERVGR-MNILVCTPGRMLQHLDQTASLEVNNLQMLVLDEADRIMDMGFQSAVDALVE 223
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L + + Q++L SAT + V LA ++L++P I +H + P L+QH
Sbjct: 224 HLPQGR---QTLLFSATQSKRVSDLARLSLKDPEYIA------VHEAA-AAATPSQLQQH 273
Query: 629 FIVTPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
++VTP +L L FI KC KM+VF ++ + E + L I
Sbjct: 274 YVVTPLAEKLDTLYGFIRANLKC---------KMIVFFSSGKQVRFAYEAIRH-LQPGIQ 323
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R E+ F + K L TDV ARG+D+P+VDW+VQ P + Y+H
Sbjct: 324 LLHLHGRQKQVARLEIISRFSAAKHACLFATDVVARGVDIPMVDWVVQADCPEDADTYIH 383
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR G ++LFL PSE +V LQ + + I ++ ++
Sbjct: 384 RSGRTARYESAGKAILFLDPSEEDGMVRRLQQKNVPIHKVNVR----------------- 426
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
E +++ ++ QQ + A K + S+ R KD + +F+ ++ L
Sbjct: 427 ------EKKKKSIREQLQNMCFQQNDIKYLAQKAFISYTR-SVHLQKD-KEVFDLDKLDL 478
Query: 866 GHFAKSFALRDAPSV--ISGIGKPKNKEELKNKKMA 899
FA+S L AP + G G +E+K K A
Sbjct: 479 DGFAQSMGLAGAPQIRFRKGKGGETAADEIKRLKNA 514
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 74 LTDIQSKAIPAALRGCDILGAAKTGSGKTLAFLVPVLEKL--YRARWTEYDGLGALIISP 131
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TREL++Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 132 TRELSVQIFEVLRKVGRHHRFSA-GLVIGGKSLKEEAERVGR-MNILVCTPGRMLQHLDQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T +L+ + ++ LVLDEADRI+D G++ + +E L + + Q++L SAT
Sbjct: 190 TASLEVNNLQMLVLDEADRIMDMGFQSAVDALVEHLPQGR---QTLLFSAT 237
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 21/135 (15%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T +L+ + ++ LVLDEADRI+D G++ + +E L + + Q++L SAT + V L
Sbjct: 189 QTASLEVNNLQMLVLDEADRIMDMGFQSAVDALVEHLPQGR---QTLLFSATQSKRVSDL 245
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQN 303
A ++L++P I +H + P L+QH++VTP +L L FI KC
Sbjct: 246 ARLSLKDPEYI------AVHEAA-AAATPSQLQQHYVVTPLAEKLDTLYGFIRANLKC-- 296
Query: 304 VNEDEESKMLVFMAT 318
KM+VF ++
Sbjct: 297 -------KMIVFFSS 304
>gi|332208126|ref|XP_003253149.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Nomascus leucogenys]
Length = 872
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 256/484 (52%), Gaps = 51/484 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++I +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIFCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KVSVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
+G +LL L+PSE +V++L +++ ++EIK+ + RL D
Sbjct: 412 DGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPERLID-------- 449
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+Q ES + Q + L A + + S++R + Y + +F+ ++ + +A S L
Sbjct: 450 -VQKKLESFLAQDQDLKERAQRCFISYIR--SVYLMKDKEVFDVSKLPIPEYALSLGLAV 506
Query: 877 APSV 880
AP +
Sbjct: 507 APRI 510
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++I + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIFCELQQKVSVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|291414270|ref|XP_002723386.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Oryctolagus
cuniculus]
Length = 600
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 258/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVQLHPRVLGALQE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A++I PTRELA+Q E+ + + F + GG
Sbjct: 67 ILEILLRREEKL-KKSEVGAIVITPTRELAIQIDEVLSHFTRHFPQLSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R +K G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKKQGGNIVVATPGRLEDMFRRKAEGLDLASCVKALDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP++I + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ ++V + L F+ ++ K LVF +T +Y+ + L ++
Sbjct: 241 RLENSYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-R 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FRS+ SG+L+CTDV ARG+D+P V+W++QY PSS++
Sbjct: 293 GVQILCIHGKM-KHKRNKIFMEFRSLPSGILVCTDVMARGIDIPEVNWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E V L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEEAYVNFLAINQKCPLQEMKLQRNPADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
S L + + + + S+++ YA + +L IF K
Sbjct: 406 ------------------KLRSMALADRAVFEKGMRAFVSYIQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 140/330 (42%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSEVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + + F + GG + R +K G +I+VATPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTRHFPQLSQILWIGGRNPGEDVERFKKQGGNIVVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L + LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVKALDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ ++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENSYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 -----RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|345570677|gb|EGX53498.1| hypothetical protein AOL_s00006g364 [Arthrobotrys oligospora ATCC
24927]
Length = 795
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 243/467 (52%), Gaps = 50/467 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G D+L ++TGSGKTLA+ IP+++KL R K + DG+ A+II PT
Sbjct: 73 TDIQRKAIPLALKGKDILGAAKTGSGKTLAFLIPVLEKLH--RAKWTPDDGLGALIISPT 130
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+ H +
Sbjct: 131 RELAIQIFEVLRKIGQRHSFSA-GLVIGGKNLQDERERLGR-MNILVCTPGRMKQHLEQN 188
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
L ++ LVLDEADRILD G++ I ++ + K + Q++L SAT T V LA
Sbjct: 189 PDLDTYNLQILVLDEADRILDMGFKDSIDAIVQGIPKSR---QTLLFSATQTKNVNDLAR 245
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
++L++P + +H S P L+QH+IVTP +L L SFI +
Sbjct: 246 LSLKDP------EYVAVHEAA-SAATPGKLQQHYIVTPLPEKLDILWSFIRANVK----- 293
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
SK+LVF ++ + E + I L G Q+ R EV F S K+ L
Sbjct: 294 --SKILVFFSSTKQVRFVYETFRQ-MQPGIPLLHLTGKQKQTARLEVSAKFSSSKNACLF 350
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEE 774
TDV ARGLD P VDW++Q P + Y+HRVGRTAR +G +LFL P+E K ++E
Sbjct: 351 ATDVVARGLDFPAVDWVIQADCPEDADTYIHRVGRTARYERDGRGVLFLCPTEEKGMLER 410
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +++ IE+I +K + ++Q + + +
Sbjct: 411 LKTKKVPIEKINVK-----------------------QNKKQSVQNQLQGICFKDPEIKY 447
Query: 835 SACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K +TS+ R Y KD IF+ +++ L FA S L AP +
Sbjct: 448 LGQKAFTSYARSVYVQKDKD---IFDLEKLPLQEFATSLGLPGAPRI 491
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G D+L ++TGSGKTLA+ IP+++KL R K + DG+ A+II PT
Sbjct: 73 TDIQRKAIPLALKGKDILGAAKTGSGKTLAFLIPVLEKLH--RAKWTPDDGLGALIISPT 130
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+ H +
Sbjct: 131 RELAIQIFEVLRKIGQRHSFSA-GLVIGGKNLQDERERLGR-MNILVCTPGRMKQHLEQN 188
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L ++ LVLDEADRILD G++ I ++ + K + Q++L SAT T
Sbjct: 189 PDLDTYNLQILVLDEADRILDMGFKDSIDAIVQGIPKSR---QTLLFSATQT 237
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G++ I ++ + K + Q++L SAT T V LA ++L++P
Sbjct: 199 LVLDEADRILDMGFKDSIDAIVQGIPKSR---QTLLFSATQTKNVNDLARLSLKDP---- 251
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +H S P L+QH+IVTP +L L SFI + SK+LVF +
Sbjct: 252 --EYVAVHEAA-SAATPGKLQQHYIVTPLPEKLDILWSFIRANVK-------SKILVFFS 301
Query: 318 T 318
+
Sbjct: 302 S 302
>gi|417405074|gb|JAA49262.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 877
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 255/484 (52%), Gaps = 51/484 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PISKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLYSFLRSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ L TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAALFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
+G +LL L+PSE +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEGMVQQLLQKKVPVKEIKI--------------NPEKLID-------- 449
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 450 -VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVNKLPIPEYALSLGLAV 506
Query: 877 APSV 880
AP +
Sbjct: 507 APRI 510
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSADGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|344287857|ref|XP_003415668.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Loxodonta
africana]
Length = 873
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 256/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAVIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELHQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLYSFMRSHLK-------KKSIVFFSSCKQVQYLYRVFCR-LRPGVSILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ +EEIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVEEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + +F+ ++ L +A S L
Sbjct: 451 --VQKKMESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFDVSKLPLPEYALSLGLA 506
Query: 876 DAPSV 880
AP V
Sbjct: 507 VAPRV 511
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSADGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFSATQT 257
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAVIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELHQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FM 308
>gi|350415720|ref|XP_003490728.1| PREDICTED: probable ATP-dependent RNA helicase DDX55 homolog
[Bombus impatiens]
Length = 589
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 259/484 (53%), Gaps = 47/484 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E +T VQ SI +L G DV + TGSGKT+A+ +P+++ LQ+ K + I
Sbjct: 22 EKFGFPYMTPVQAASIPLLLKGKDVAAEAVTGSGKTIAFLVPLLEILQKRNEKWKPIE-I 80
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+Q E+ K + + L GG + + R++ G +I+VATPGR
Sbjct: 81 GAIIISPTRELAIQINEVLQKFLDNIPDLKQVLLVGGTTIAEDADRLKAGANIIVATPGR 140
Query: 528 L---LDHCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
L L +CK + K +E L+LDEADR+LD G+ + L L + + ++ L S
Sbjct: 141 LEDMLSNCKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLR---RTGLFS 197
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T +Q+L L+NP I + +I P +L ++++ + +L +
Sbjct: 198 ATQTKELQQLIRAGLRNPAVITVKEKPNIST-------PTNLINNYVIVNAEYKLSIMID 250
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI K N+ K ++F++T DY + + T+L I F +HG M +++R +VF
Sbjct: 251 FIQRKGINL------KYMIFLSTCACVDYFSHVAQTML-PTIQVFAIHGKM-KNKRYKVF 302
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
FRS++SG+LICTDV ARG+D+ VDW++QY P S++ +VHR GRTAR+G+EG++LLF
Sbjct: 303 NDFRSIESGILICTDVMARGIDISEVDWVLQYDPPCSASSFVHRCGRTARIGNEGNALLF 362
Query: 764 LIPSEVKLVEEL-QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L+ +E VE + +N+++ +++I L+ +++S K T LQ
Sbjct: 363 LLKTEDAYVEFIKRNQKVDLQQIVLE---PSIISYK-----------KCLTCMRNLQK-- 406
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
Q + L A + + S+V+ Y + +L I K I LG A F L P +
Sbjct: 407 -----QDRSLFDKANRAFVSYVQAYNKHECNL--ILRLKDIDLGKLAMGFGLLRMPRMPE 459
Query: 883 GIGK 886
GK
Sbjct: 460 LKGK 463
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 101/177 (57%), Gaps = 8/177 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ SI +L G DV + TGSGKT+A+ +P+++ LQ+ K + I A+II P
Sbjct: 29 MTPVQAASIPLLLKGKDVAAEAVTGSGKTIAFLVPLLEILQKRNEKWKPIE-IGAIIISP 87
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL---LDH 122
TRELA+Q E+ K + + L GG + + R++ G +I+VATPGRL L +
Sbjct: 88 TRELAIQINEVLQKFLDNIPDLKQVLLVGGTTIAEDADRLKAGANIIVATPGRLEDMLSN 147
Query: 123 CKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
CK + K +E L+LDEADR+LD G+ + L L + + ++ L SAT T
Sbjct: 148 CKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLR---RTGLFSATQT 201
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 184 CKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
CK + K +E L+LDEADR+LD G+ + L L + + ++ L SAT T +
Sbjct: 148 CKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLR---RTGLFSATQTKEL 204
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
Q+L L+NP I + +I P +L ++++ + +L + FI K
Sbjct: 205 QQLIRAGLRNPAVITVKEKPNIST-------PTNLINNYVIVNAEYKLSIMIDFIQRKGI 257
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLST 331
N+ K ++F++T DY + + T
Sbjct: 258 NL------KYMIFLSTCACVDYFSHVAQT 280
>gi|448528823|ref|XP_003869760.1| Hca4 protein [Candida orthopsilosis Co 90-125]
gi|380354114|emb|CCG23627.1| Hca4 protein [Candida orthopsilosis]
Length = 755
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 264/500 (52%), Gaps = 47/500 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
+ L E I+ +T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L ++ I+
Sbjct: 61 RGLKESAFIS-LTDIQKKTIPIALKGHDLMGTARTGSGKTLAFLIPVIELL--IKNDITE 117
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+I+ PTRELA+Q E+ K+ K + +TGG+ ++ EK RI + ++ILV
Sbjct: 118 YDGLAALIVSPTRELAVQIFEVLAKIGK-YNSFSAGLVTGGKDVQYEKERISR-MNILVG 175
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+ H ++ S ++ LVLDEADR LD G+++ I + L P Q++L S
Sbjct: 176 TPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIISHLP---PTRQTLLFS 232
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T +V+ LA ++L NP +I + D+ IP+SL Q+++ P + +L L S
Sbjct: 233 ATTTDSVRDLARLSLTNPKRIGTSSDQDVS------AIPESLDQYYVRVPLEEKLDVLWS 286
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SK+LVF ++ Y E T L I+ KL+G Q+ R E
Sbjct: 287 FIKSHLK-------SKILVFFSSSKQVQYTYESFRT-LQPGISLLKLYGRNKQTSRLETT 338
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TD+ ARGLD P +DW++Q P YVHRVGR+AR G +G SLL
Sbjct: 339 MKFAQAQHVCLFATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQGKSLLM 398
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L P+E EE +R++ + I+ K L+++K + + +++ +
Sbjct: 399 LTPTE----EEGFLQRLKAQNIEPK-----LMNIK-------------QKSKKSIRPQLQ 436
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + ++ + + ++ F + + + + +FN + + +A S L AP + I
Sbjct: 437 SLCFKDPVMKNLGQRAFIAY--FKSVHIQKDKEVFNVEALPAEAYASSLGLPGAPKIKIK 494
Query: 883 GIGKPKNKEELKNKKMAINK 902
G K K+ K +A++K
Sbjct: 495 GGSASKEKKNESRKLLALSK 514
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ L ++ I+ DG+ A+I+ P
Sbjct: 71 LTDIQKKTIPIALKGHDLMGTARTGSGKTLAFLIPVIELL--IKNDITEYDGLAALIVSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ K + +TGG+ ++ EK RI + ++ILV TPGR+ H
Sbjct: 129 TRELAVQIFEVLAKIGK-YNSFSAGLVTGGKDVQYEKERISR-MNILVGTPGRISQHLNE 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ S ++ LVLDEADR LD G+++ I + L P Q++L SAT T
Sbjct: 187 AVGMETSNLQVLVLDEADRCLDMGFKKQIDNIISHL---PPTRQTLLFSATTT 236
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+++ I + L P Q++L SAT T +V+ LA ++
Sbjct: 190 METSNLQVLVLDEADRCLDMGFKKQIDNIISHLP---PTRQTLLFSATTTDSVRDLARLS 246
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP +I + D+ IP+SL Q+++ P + +L L SFI +
Sbjct: 247 LTNPKRIGTSSDQDVS------AIPESLDQYYVRVPLEEKLDVLWSFIKSHLK------- 293
Query: 310 SKMLVFMATQDMADYHTELLST 331
SK+LVF ++ Y E T
Sbjct: 294 SKILVFFSSSKQVQYTYESFRT 315
>gi|378726604|gb|EHY53063.1| hypothetical protein HMPREF1120_01264 [Exophiala dermatitidis
NIH/UT8656]
Length = 864
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 269/506 (53%), Gaps = 51/506 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+TT+Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 75 MTTIQSRTIPLALQGADILGAAKTGSGKTLAFLVPVLENL--YRKRWTGYDGLGALILSP 132
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ T+ + GG+ ++ E+ R+ + ++ILVATPGR+L H
Sbjct: 133 TRELAIQIFEVLRKVGRNHTFSA-GLVIGGKSLQEERDRLGR-MNILVATPGRMLQHMDQ 190
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T L ++ LVLDEADRI+D G++ + +E L +++ Q+++ SAT T V LA
Sbjct: 191 TAELDIGNLQMLVLDEADRIMDMGFKATLDALIEHLPRER---QTLMFSATQTKRVSDLA 247
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L +P + +H +S P +L+Q++IVTP +L L SFI +
Sbjct: 248 RLSLTDP------EFVSVHEGAES-ATPSTLQQNYIVTPLAEKLDVLWSFIRANVKK--- 297
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
K+LVF+++ + E L I LHG Q+ R ++ F + K L
Sbjct: 298 ----KILVFLSSGKQVRFVYEAFRH-LQPGIPLLHLHGRQKQTARLDITTKFSNSKYACL 352
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VDW+VQ P + Y+HRVGRTAR +G +++F+ PSE + +++
Sbjct: 353 FSTDVAARGLDFPSVDWVVQVDCPEDAETYIHRVGRTARYERDGRAVMFVDPSEEEGMLK 412
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQ-MSFESAVLQQKIL 832
L+ +++ +E+I N+ KM+ +T T LQ M F+ L K L
Sbjct: 413 ALERKKVTVEKI-------NVRQKKMQ-----------QTIKTQLQNMCFKDPEL--KYL 452
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV--ISGIGKPKNK 890
K + S+VR + + + + F+ K++ L FA S L P V + G K
Sbjct: 453 ---GQKAFVSYVR--SVHVQKDKETFDLKKLDLEAFAASLGLPGTPRVKFVKGEDAKARK 507
Query: 891 EELKNKKMAINKEKSFKQRGNFSKKQ 916
+ A+ E S + G +K+
Sbjct: 508 NAPRQLLAALESEGSEDENGERKQKK 533
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 112/173 (64%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+TT+Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+I+ P
Sbjct: 75 MTTIQSRTIPLALQGADILGAAKTGSGKTLAFLVPVLENL--YRKRWTGYDGLGALILSP 132
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ T+ + GG+ ++ E+ R+ + ++ILVATPGR+L H
Sbjct: 133 TRELAIQIFEVLRKVGRNHTFSA-GLVIGGKSLQEERDRLGR-MNILVATPGRMLQHMDQ 190
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T L ++ LVLDEADRI+D G++ + +E L +++ Q+++ SAT T
Sbjct: 191 TAELDIGNLQMLVLDEADRIMDMGFKATLDALIEHLPRER---QTLMFSATQT 240
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T L ++ LVLDEADRI+D G++ + +E L +++ Q+++ SAT T V L
Sbjct: 190 QTAELDIGNLQMLVLDEADRIMDMGFKATLDALIEHLPRER---QTLMFSATQTKRVSDL 246
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L +P + +H +S P +L+Q++IVTP +L L SFI +
Sbjct: 247 ARLSLTDP------EFVSVHEGAES-ATPSTLQQNYIVTPLAEKLDVLWSFIRANVKK-- 297
Query: 306 EDEESKMLVFMAT 318
K+LVF+++
Sbjct: 298 -----KILVFLSS 305
>gi|348675960|gb|EGZ15778.1| hypothetical protein PHYSODRAFT_509429 [Phytophthora sojae]
Length = 749
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 249/471 (52%), Gaps = 46/471 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
T T +Q ++ L G DVL ++TGSGKTLA+ +P+++KL R + S +DG+ A+
Sbjct: 83 GFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKL--FRLRWSVEDGLGAL 140
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
+I PTRELALQ E+ + K+ + + GG+ + E+ R+ + +++L+ TPGRLL
Sbjct: 141 VISPTRELALQIFEVLRNVGKAHAFSA-GLVIGGKNFREEQIRLIR-MNLLICTPGRLLQ 198
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H + T S ++ LVLDEADRILD G+++ + LE L + Q++L SAT T +V
Sbjct: 199 HMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGER-QTMLFSATQTKSV 257
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L+ P + +H + + P L Q ++VTP + +L L SFI +
Sbjct: 258 KDLAALSLREP------EYVAVHEHSAN-ATPKGLSQSYVVTPLERKLDVLLSFIKSHLK 310
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K +VF++T + + L I LHG Q +R EV+ F +
Sbjct: 311 Q-------KTIVFLSTCRQVRFVHSVFCK-LQPGIPLCALHGKYKQGKRVEVYYEFLNKP 362
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+ VL TD+AARGLD P VDW++Q P S +Y+HRVGRTAR +G +L+ L+PSEV
Sbjct: 363 AAVLFATDIAARGLDFPQVDWVLQLDCPEDSANYIHRVGRTARYNKQGKALMCLVPSEVD 422
Query: 771 -LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
+++ L++ ++ I E KL T+ + S V
Sbjct: 423 GMMKRLEDAKVPIRETKLN-----------------------PAKTTSCRQKVASVVASD 459
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + + A K + S+VR + Y + R +F+ + L +A+S L AP +
Sbjct: 460 KEIKSLAQKAFMSYVR--SVYLQPDREVFDATALPLDAYAESLGLPGAPRM 508
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 132/244 (54%), Gaps = 18/244 (7%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
T T +Q ++ L G DVL ++TGSGKTLA+ +P+++KL R + S +DG+ A+
Sbjct: 83 GFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKL--FRLRWSVEDGLGAL 140
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
+I PTRELALQ E+ + K+ + + GG+ + E+ R+ + +++L+ TPGRLL
Sbjct: 141 VISPTRELALQIFEVLRNVGKAHAFSA-GLVIGGKNFREEQIRLIR-MNLLICTPGRLLQ 198
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
H + T S ++ LVLDEADRILD G+++ + LE L + Q++L SAT T +
Sbjct: 199 HMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGER-QTMLFSATQTKSV 257
Query: 182 CWCKHTETLKFSKVEHLVLDEAD-----RILDQGY-----ERDIAEFLEILKKQKPQFQS 231
K L + E++ + E + L Q Y ER + L +K Q
Sbjct: 258 ---KDLAALSLREPEYVAVHEHSANATPKGLSQSYVVTPLERKLDVLLSFIKSHLKQKTI 314
Query: 232 VLLS 235
V LS
Sbjct: 315 VFLS 318
>gi|384945586|gb|AFI36398.1| putative ATP-dependent RNA helicase DDX10 [Macaca mulatta]
Length = 872
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 261/494 (52%), Gaps = 55/494 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAI 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L++P + +H P +L+
Sbjct: 240 IENLPKKR---QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 290 QNYIVCELQQKISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 ILALHGRQQQMRRMEVYNEFVHKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR +G +LL L+PSE +V++L +++ ++EIK+ + +L
Sbjct: 402 RAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKL 447
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
D +Q ES + Q + L A + + S++R + Y + +F+ ++ +
Sbjct: 448 ID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFDVSKLPIP 496
Query: 867 HFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 497 EYALSLGLAVAPRI 510
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|395846785|ref|XP_003796074.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Otolemur garnettii]
Length = 600
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 265/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L + + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPGVLGALRK-LGFRCMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ K F+ GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLAHFTKHFSQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + T++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVA--ATNTQKTPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + + F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQMVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLKEMKLQKNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+++ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYIQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ L A+ FAL P + GK
Sbjct: 446 LDLASLARGFALLKMPKMPELRGK 469
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 139/325 (42%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ K F+ GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAIQIDEVLAHFTKHFSQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + T++ P L+ +++V + + F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVA--ATNTQKTPSRLENYYMVCKADEKFNQMVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|425777569|gb|EKV15735.1| DEAD box RNA helicase (Hca4), putative [Penicillium digitatum Pd1]
gi|425779636|gb|EKV17678.1| DEAD box RNA helicase (Hca4), putative [Penicillium digitatum
PHI26]
Length = 808
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 248/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I G D+L ++TGSGKTLA+ +PI++ L R K + DG+ A+++ P
Sbjct: 69 LTDIQSRAINHAFKGRDILGAAKTGSGKTLAFLVPILENL--YRKKWTELDGLGALVLSP 126
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + + + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 127 TRELAIQIFEVLRKIGRYHNFSA-GLVIGGKSLREEQDRLGR-MNILVCTPGRMLQHLDQ 184
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + + ++ LVLDEADRI+D G+++ + L+ L KQ+ Q++L SAT T V LA
Sbjct: 185 TAMFETNNLQMLVLDEADRIMDMGFQKTVDAILDHLPKQR---QTMLFSATQTKKVSDLA 241
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ P + +H S P +L+QH+ VTP +L L SFI +
Sbjct: 242 RLSLQEP------EYVSVHEAAAS-ATPSTLQQHYTVTPLPQKLDTLWSFIRSNLK---- 290
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ + E L L I+ LHG Q R ++ F + VL
Sbjct: 291 ---SKTVVFLSSGKQVRFVYESLRQ-LQPGISLLHLHGRQKQGGRLDITTKFSQAQHAVL 346
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARGLD P VDW++Q P + Y+HRVGRTAR G ++LFL PSE K ++
Sbjct: 347 FATDVVARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYERVGRAVLFLDPSEEKGFLK 406
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
+L+++++ IE+I +K Q + +++ M F+ L K L
Sbjct: 407 QLEHKKVPIEKINIKSNKQQSVKNQLQ------------------NMCFKDPEL--KYL- 445
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + Y + + F K++ L +A S L AP +
Sbjct: 446 --GQKAFISYVK--SIYVQKDKETFKIKELPLEEYAASLGLPGAPRI 488
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I G D+L ++TGSGKTLA+ +PI++ L R K + DG+ A+++ P
Sbjct: 69 LTDIQSRAINHAFKGRDILGAAKTGSGKTLAFLVPILENL--YRKKWTELDGLGALVLSP 126
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + + + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 127 TRELAIQIFEVLRKIGRYHNFSA-GLVIGGKSLREEQDRLGR-MNILVCTPGRMLQHLDQ 184
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRI+D G+++ + L+ L KQ+ Q++L SAT T
Sbjct: 185 TAMFETNNLQMLVLDEADRIMDMGFQKTVDAILDHLPKQR---QTMLFSATQT 234
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + + ++ LVLDEADRI+D G+++ + L+ L KQ+ Q++L SAT T V L
Sbjct: 184 QTAMFETNNLQMLVLDEADRIMDMGFQKTVDAILDHLPKQR---QTMLFSATQTKKVSDL 240
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++LQ P + +H S P +L+QH+ VTP +L L SFI +
Sbjct: 241 ARLSLQEP------EYVSVHEAAAS-ATPSTLQQHYTVTPLPQKLDTLWSFIRSNLK--- 290
Query: 306 EDEESKMLVFMAT 318
SK +VF+++
Sbjct: 291 ----SKTVVFLSS 299
>gi|426374586|ref|XP_004054151.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Gorilla gorilla
gorilla]
Length = 600
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 263/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVGRFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L VL +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALE-VLVK 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRNTVDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVGRFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|440894340|gb|ELR46816.1| Putative ATP-dependent RNA helicase DDX10, partial [Bos grunniens
mutus]
Length = 773
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSLLALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 451 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVSKLPISDYALSLGLA 506
Query: 876 DAPSV 880
AP +
Sbjct: 507 VAPRI 511
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSADGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|156049233|ref|XP_001590583.1| hypothetical protein SS1G_08323 [Sclerotinia sclerotiorum 1980]
gi|160380617|sp|A7ESL8.1|DBP4_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp4
gi|154692722|gb|EDN92460.1| hypothetical protein SS1G_08323 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 808
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 243/474 (51%), Gaps = 48/474 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + +T VQ ++ L G D+L ++TGSGKTLA+ +P+++ L R K + DG+
Sbjct: 65 EASHFKTLTDVQSKAVPLALKGKDILGAAKTGSGKTLAFLVPVLENL--YRQKWTELDGL 122
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+Q E+ K+ + T+ + GG ++ E+ R+ + ++ILV TPGR
Sbjct: 123 GALIISPTRELAIQIFEVLRKIGRYHTFSA-GLIIGGRSLQEERERLGR-MNILVCTPGR 180
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
+L H T ++ LVLDEADRI+D G++ + LE L KQ+ Q++L SAT T
Sbjct: 181 MLQHMDQTAAFDVDNLQMLVLDEADRIMDMGFQTSVDAILEHLPKQR---QTMLFSATQT 237
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V LA ++L+ P + +H S P +L+QH+ V P +L L FI
Sbjct: 238 KKVSDLARLSLKEP------EYVAVHEAASS-ATPTTLQQHYCVVPLPEKLNTLFGFIRA 290
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+ +K++VFM++ + E L L I LHG Q+ R ++ F
Sbjct: 291 NLK-------AKIIVFMSSGKQVRFVYESLRH-LQPGIPLLHLHGRQKQTARLDITSKFS 342
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
S K+ + TDV ARGLD P VDW++Q P + Y+HRVGRTAR G G ++LFL PS
Sbjct: 343 SSKNSCIFATDVVARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYGKVGRAVLFLDPS 402
Query: 768 EVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E + +++ L+++++ I++I ++ ++ ++
Sbjct: 403 EEEGMLKRLEHKKVPIQKINIR-----------------------PNKTQDIKNQLQNMC 439
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L K + S+ + + + + + IFN I L +A S L AP +
Sbjct: 440 FQDPELKYLGQKAFVSYAK--SVFLQKDKEIFNINDIDLEGYASSIGLPGAPKI 491
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ ++ L G D+L ++TGSGKTLA+ +P+++ L R K + DG+ A+II P
Sbjct: 72 LTDVQSKAVPLALKGKDILGAAKTGSGKTLAFLVPVLENL--YRQKWTELDGLGALIISP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRYHTFSA-GLIIGGRSLQEERERLGR-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRI+D G++ + LE L KQ+ Q++L SAT T
Sbjct: 188 TAAFDVDNLQMLVLDEADRIMDMGFQTSVDAILEHLPKQR---QTMLFSATQT 237
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T ++ LVLDEADRI+D G++ + LE L KQ+ Q++L SAT T V L
Sbjct: 187 QTAAFDVDNLQMLVLDEADRIMDMGFQTSVDAILEHLPKQR---QTMLFSATQTKKVSDL 243
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P + +H S P +L+QH+ V P +L L FI +
Sbjct: 244 ARLSLKEP------EYVAVHEAASS-ATPTTLQQHYCVVPLPEKLNTLFGFIRANLK--- 293
Query: 306 EDEESKMLVFMAT 318
+K++VFM++
Sbjct: 294 ----AKIIVFMSS 302
>gi|37360468|dbj|BAC98212.1| mKIAA1595 protein [Mus musculus]
Length = 615
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 258/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 31 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 89
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 90 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 148
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 149 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 208
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 209 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 263
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 264 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 315
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 316 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 374
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 375 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 421
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 422 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 468
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 469 GFALLRMPRMPELRGK 484
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 42 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 100
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 101 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 160
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + K E L L
Sbjct: 161 -------EDMFRRKAEGLDL---------------------------------------- 173
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 174 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 221
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 222 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 279
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 280 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 312
>gi|349603726|gb|AEP99487.1| putative ATP-dependent RNA helicase DDX10-like protein, partial
[Equus caballus]
Length = 828
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 29 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 85
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 86 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 143
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 144 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 201
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 202 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 253
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 254 KISVLYSFLRSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGVSILALHGRQQQ 305
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 306 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 365
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 366 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 404
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 405 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVSKLPIPEYALSLGLA 460
Query: 876 DAPSV 880
AP V
Sbjct: 461 VAPRV 465
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 46 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 103
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 104 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 161
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 162 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 213
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 151 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 207
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 208 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 260
Query: 296 FI 297
F+
Sbjct: 261 FL 262
>gi|404501489|ref|NP_001258255.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Rattus norvegicus]
gi|149063251|gb|EDM13574.1| rCG21751, isoform CRA_b [Rattus norvegicus]
Length = 600
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 258/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPLVLGALRE-LGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L ++ + + +H
Sbjct: 249 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALV-QRVKILCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTVDLLP-------------K 406
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 407 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLRMPRMPELKGK 469
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 146/330 (44%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L D+A +++ L
Sbjct: 146 EDMFRR-------KAEGL---------------DLASYVKSL------------------ 165
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 166 ----------------DVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
+ ++ K LVF +T +Y+ + L
Sbjct: 265 R-------QQEKHLVFFSTCACVEYYGKAL 287
>gi|440490575|gb|ELQ70119.1| ATP-dependent RNA helicase HAS1 [Magnaporthe oryzae P131]
Length = 578
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 269/511 (52%), Gaps = 62/511 (12%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 128 EEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGT 185
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGR
Sbjct: 186 GVIVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGR 244
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT T
Sbjct: 245 LLDHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQT 300
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ ++ + + + L+Q ++V R + L SF+
Sbjct: 301 TKVEDLARVSLRPGPLYLNVDEEKEYSTV-------EGLEQGYVVCEADKRFILLFSFL- 352
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ ++ K++VF ++ + Y+ ELL+ + + LHG Q +RT F F
Sbjct: 353 ------QKMKKKKIIVFFSSCNSVKYYAELLNYI---DCQVLDLHGKQKQQKRTNTFFEF 403
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ G LICTDVAARGL + P DY+HRVGRTAR +G SL+FL+
Sbjct: 404 CNADRGTLICTDVAARGL---------DFDPPDDPRDYIHRVGRTARGTNKKGRSLMFLL 454
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV + L+ R+ + E D + NV Q E
Sbjct: 455 PSEVGFLTYLKQARVPVVEF----------------DFPTKSIKNV-------QSQLEKL 491
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + L++SA G+ S++ YAS+S LR +F+ ++ L AKSF P V +G
Sbjct: 492 IGKNYYLNSSAKDGFRSYLHAYASHS--LRSVFDINKLDLAKVAKSFGFATPPRVDIQLG 549
Query: 886 KPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
+K++ + A + +Q G + K++
Sbjct: 550 ASMSKDKKAGGRRAYGSQP--RQGGTYGKRR 578
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 32/244 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 130 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGTGV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 188 IVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT
Sbjct: 247 DHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQTTK 302
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR--ILDQGYERDIAEFLEIL 222
L P + E ++S VE L V+ EAD+ IL + FL+ +
Sbjct: 303 VEDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEADKRFIL-------LFSFLQKM 355
Query: 223 KKQK 226
KK+K
Sbjct: 356 KKKK 359
>gi|12849752|dbj|BAB28466.1| unnamed protein product [Mus musculus]
Length = 528
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 258/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 249 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 406
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 407 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLRMPRMPELRGK 469
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 152/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGR
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR- 144
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
L+ + R AE L++
Sbjct: 145 --------------------------LEDMFRRK-AEGLDL------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 265 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 297
>gi|281345859|gb|EFB21443.1| hypothetical protein PANDA_005663 [Ailuropoda melanoleuca]
Length = 752
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 79 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 135
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 136 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 193
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 194 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 251
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 252 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 303
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 304 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 355
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 356 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 415
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 416 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 454
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 455 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVNKLPIPEYALSLGLA 510
Query: 876 DAPSV 880
AP V
Sbjct: 511 VAPRV 515
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 96 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 153
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 154 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 211
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 212 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 261
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 201 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 257
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 258 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 310
Query: 296 FI 297
F+
Sbjct: 311 FL 312
>gi|340728636|ref|XP_003402625.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Bombus terrestris]
Length = 598
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 260/484 (53%), Gaps = 47/484 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E +N +T VQ SI +L G DV + TGSGKT+A+ +P+++ LQ+ K + I
Sbjct: 22 EELNFPYMTPVQAASIPLLLKGKDVAAEAVTGSGKTIAFLVPLLEILQKRNEKWKPIE-I 80
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+Q E+ K + + + L GG + + +++ G +I++ATPGR
Sbjct: 81 GAIIISPTRELAIQINEVLQKFLDNIPDLKQALLVGGTTIAEDADKLKAGANIIIATPGR 140
Query: 528 L---LDHCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
L L +CK + K +E L+LDEADR+LD G+ + L L + + ++ L S
Sbjct: 141 LEDMLSNCKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLR---RTGLFS 197
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T +Q+L L+NP I + +I P +L ++++ + +L +
Sbjct: 198 ATQTKELQQLIRAGLRNPALITVKEKPNIST-------PSNLINNYVIVNAEYKLSIMID 250
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI K ++ K ++F++T DY + + T+L I F +HG M +++R +VF
Sbjct: 251 FIQHKGTDL------KYMIFLSTCACVDYFSHVTQTML-PTIQVFAIHGKM-KNKRYKVF 302
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
FRS++SG+LICTDV ARG+D+ VDW++QY P S++ +VHR GRTAR+G++G++LLF
Sbjct: 303 NDFRSIESGILICTDVMARGIDISEVDWVLQYDPPCSASSFVHRCGRTARIGNQGNALLF 362
Query: 764 LIPSEVKLVEEL-QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L+ +E VE + +N+++ +++I L+ +++S K M
Sbjct: 363 LLKTEDAYVEFIKRNQKVDLQQIVLE---PSIISYK------------------KCLMCM 401
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
+ Q + A + + S+++ Y + +L I K I LG A F L P +
Sbjct: 402 RNLQKQDRSFFDKANRAFVSYIQAYNKHECNL--ILRLKDIDLGKLAMGFGLLRMPRMPE 459
Query: 883 GIGK 886
GK
Sbjct: 460 LKGK 463
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 104/182 (57%), Gaps = 8/182 (4%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N +T VQ SI +L G DV + TGSGKT+A+ +P+++ LQ+ K + I A
Sbjct: 24 LNFPYMTPVQAASIPLLLKGKDVAAEAVTGSGKTIAFLVPLLEILQKRNEKWKPIE-IGA 82
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL- 119
+II PTRELA+Q E+ K + + + L GG + + +++ G +I++ATPGRL
Sbjct: 83 IIISPTRELAIQINEVLQKFLDNIPDLKQALLVGGTTIAEDADKLKAGANIIIATPGRLE 142
Query: 120 --LDHCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L +CK + K +E L+LDEADR+LD G+ + L L + + ++ L SAT
Sbjct: 143 DMLSNCKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLR---RTGLFSAT 199
Query: 177 LT 178
T
Sbjct: 200 QT 201
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 184 CKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
CK + K +E L+LDEADR+LD G+ + L L + + ++ L SAT T +
Sbjct: 148 CKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLR---RTGLFSATQTKEL 204
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
Q+L L+NP I + +I P +L ++++ + +L + FI K
Sbjct: 205 QQLIRAGLRNPALITVKEKPNIST-------PSNLINNYVIVNAEYKLSIMIDFIQHKGT 257
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLST 331
++ K ++F++T DY + + T
Sbjct: 258 DL------KYMIFLSTCACVDYFSHVTQT 280
>gi|148687630|gb|EDL19577.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_a [Mus
musculus]
Length = 618
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 258/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 34 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 92
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 93 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 151
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 152 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 211
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 212 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 266
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 267 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 318
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 319 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 377
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 378 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 424
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 425 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 471
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 472 GFALLRMPRMPELRGK 487
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 45 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 103
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 104 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 163
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + K E L L
Sbjct: 164 -------EDMFRRKAEGLDL---------------------------------------- 176
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 177 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 224
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 225 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 282
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 283 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 315
>gi|74181724|dbj|BAE32574.1| unnamed protein product [Mus musculus]
Length = 618
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 258/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 34 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 92
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 93 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 151
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 152 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 211
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 212 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 266
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 267 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 318
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 319 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 377
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 378 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 424
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 425 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 471
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 472 GFALLRMPRMPELRGK 487
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 45 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 103
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 104 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 163
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + K E L L
Sbjct: 164 -------EDMFRRKAEGLDL---------------------------------------- 176
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 177 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 224
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 225 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 282
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 283 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 315
>gi|242219333|ref|XP_002475447.1| predicted protein [Postia placenta Mad-698-R]
gi|220725348|gb|EED79339.1| predicted protein [Postia placenta Mad-698-R]
Length = 806
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 149/413 (36%), Positives = 231/413 (55%), Gaps = 32/413 (7%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
S+ + P + K+ L + +T +Q S+ L G DVL ++TGSGKTLA+ +P+
Sbjct: 55 SFADLP-VSGLTKRGLKKAF-FVDMTDIQAKSLPVSLKGKDVLGAARTGSGKTLAFLVPV 112
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
++ L R K +DG+ A+II PTRELA+Q ++ + + + GG+ +K E
Sbjct: 113 LEIL--YRRKWGPQDGLGALIISPTRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNVKDE 169
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+ R+ + ++ILVATPGRLL H T + ++ LVLDEADRILD G++R ++ L L
Sbjct: 170 RERLSR-MNILVATPGRLLQHMDQTIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHL 228
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
K + Q++L SAT T +V LA ++L++P+ I +H++ ++ +P SL+QH++
Sbjct: 229 PKAR---QTLLFSATQTDSVSDLARLSLKDPVYIG------VHDSDNASAMPKSLEQHYV 279
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ +L L SF+ Q SK+LVF+++ + E L + L
Sbjct: 280 LCTLDQKLDLLWSFLKSHLQ-------SKVLVFLSSCKQVRFVFETFRR-LHPGVPLLHL 331
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG Q R F+ F +K VL TD+AARGLD P V+W++Q AP + Y+HRVGR
Sbjct: 332 HGKQKQMTRLATFQRFTGMKHAVLFATDIAARGLDFPAVNWVLQVDAPEDAETYIHRVGR 391
Query: 751 TARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLK--------DCLQNL 794
TAR G LLFL+PSE + + + L + I E+IK++ + LQNL
Sbjct: 392 TARYESAGKGLLFLMPSEEEGMTQALAKKSITAEKIKIRASKTQSIENQLQNL 444
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q S+ L G DVL ++TGSGKTLA+ +P+++ L R K +DG+ A+II P
Sbjct: 77 MTDIQAKSLPVSLKGKDVLGAARTGSGKTLAFLVPVLEIL--YRRKWGPQDGLGALIISP 134
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ + + + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 135 TRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNVKDERERLSR-MNILVATPGRLLQHMDQ 192
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T
Sbjct: 193 TIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHLPKAR---QTLLFSATQT 242
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G++R ++ L L K + Q++L S
Sbjct: 182 TPGRLLQHMDQTIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHLPKAR---QTLLFS 238
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L++P+ I +H++ ++ +P SL+QH+++ +L L S
Sbjct: 239 ATQTDSVSDLARLSLKDPVYI------GVHDSDNASAMPKSLEQHYVLCTLDQKLDLLWS 292
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
F+ Q SK+LVF+++
Sbjct: 293 FLKSHLQ-------SKVLVFLSS 308
>gi|255956657|ref|XP_002569081.1| Pc21g20950 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590792|emb|CAP96992.1| Pc21g20950 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 805
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 248/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I G D+L ++TGSGKTLA+ +PI++ L R K + DG+ A+++ P
Sbjct: 69 LTDIQSRAINHAFKGRDILGAAKTGSGKTLAFLVPILENL--YRKKWTELDGLGALVLSP 126
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + + + GG+ ++ E+ R+ + ++IL+ TPGR+L H
Sbjct: 127 TRELAIQIFEVLRKIGRYHNFSA-GLIIGGKSLREEQDRLGR-MNILICTPGRMLQHLDQ 184
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + + ++ LVLDEADRI+D G+++ + ++ L KQ+ Q++L SAT T V LA
Sbjct: 185 TAMFETNNLQMLVLDEADRIMDMGFQKTVDAIIDHLPKQR---QTMLFSATQTKKVGDLA 241
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ P + +H S P +L+QH+ +TP +L L SFI +
Sbjct: 242 RLSLQEP------EYVSVHEAAAS-ATPSTLQQHYTITPLPQKLDTLWSFIRSNLK---- 290
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK +VF+++ Y E L L I+ LHG Q R ++ F + VL
Sbjct: 291 ---SKTVVFLSSGKQVRYVYESLRQ-LQPGISLLHLHGRQKQGGRLDITTKFSQAQHAVL 346
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARGLD P VDW++Q P + Y+HRVGRTAR G ++LFL PSE K ++
Sbjct: 347 FATDVVARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERVGRAVLFLDPSEEKGFLK 406
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
+L+++++ IE+I +K Q + +++ M F+ L K L
Sbjct: 407 QLEHKKVPIEKINIKSNKQQSVKNQLQ------------------NMCFKDPEL--KYL- 445
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + Y + + F K++ L +A S L AP +
Sbjct: 446 --GQKAFISYVK--SIYVQKDKETFKIKELPLEEYAASLGLPGAPRI 488
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I G D+L ++TGSGKTLA+ +PI++ L R K + DG+ A+++ P
Sbjct: 69 LTDIQSRAINHAFKGRDILGAAKTGSGKTLAFLVPILENL--YRKKWTELDGLGALVLSP 126
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + + + GG+ ++ E+ R+ + ++IL+ TPGR+L H
Sbjct: 127 TRELAIQIFEVLRKIGRYHNFSA-GLIIGGKSLREEQDRLGR-MNILICTPGRMLQHLDQ 184
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRI+D G+++ + ++ L KQ+ Q++L SAT T
Sbjct: 185 TAMFETNNLQMLVLDEADRIMDMGFQKTVDAIIDHLPKQR---QTMLFSATQT 234
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 17/144 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + + ++ LVLDEADRI+D G+++ + ++ L KQ+ Q++L SAT T V L
Sbjct: 184 QTAMFETNNLQMLVLDEADRIMDMGFQKTVDAIIDHLPKQR---QTMLFSATQTKKVGDL 240
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++LQ P + +H S P +L+QH+ +TP +L L SFI +
Sbjct: 241 ARLSLQEP------EYVSVHEAAAS-ATPSTLQQHYTITPLPQKLDTLWSFIRSNLK--- 290
Query: 306 EDEESKMLVFMATQDMADYHTELL 329
SK +VF+++ Y E L
Sbjct: 291 ----SKTVVFLSSGKQVRYVYESL 310
>gi|117647283|ref|NP_080685.2| ATP-dependent RNA helicase DDX55 isoform 1 [Mus musculus]
gi|115502145|sp|Q6ZPL9.2|DDX55_MOUSE RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|26329441|dbj|BAC28459.1| unnamed protein product [Mus musculus]
Length = 600
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 258/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 249 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 406
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 407 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLRMPRMPELRGK 469
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + K E L L
Sbjct: 146 -------EDMFRRKAEGLDL---------------------------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 265 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 297
>gi|116003979|ref|NP_001070349.1| probable ATP-dependent RNA helicase DDX10 [Bos taurus]
gi|115305270|gb|AAI23580.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Bos taurus]
gi|296480316|tpg|DAA22431.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Bos taurus]
Length = 876
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSLLALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 451 --VQKKLESFLAQDQDLKERAQRCFISYIR--SVYLMKDKEIFDVSKLPISDYALSLGLA 506
Query: 876 DAPSV 880
AP +
Sbjct: 507 VAPRI 511
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSADGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|301764042|ref|XP_002917443.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Ailuropoda melanoleuca]
Length = 926
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 261/495 (52%), Gaps = 56/495 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 125 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 179
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 180 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 236
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 237 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 295
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 296 IENLPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 345
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 346 QNYIVCELQQKISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 397
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 398 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 457
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR +G +LL L+PSE K +V++L +++ ++EIK+ + +
Sbjct: 458 RAGRTARYKEDGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEK 503
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
L D +Q ES + Q + L A + + S++R + Y + IF+ ++ +
Sbjct: 504 LID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVNKLPI 552
Query: 866 GHFAKSFALRDAPSV 880
+A S L AP V
Sbjct: 553 PEYALSLGLAVAPRV 567
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 148 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 205
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 206 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 263
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 264 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 313
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 253 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 309
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 310 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 362
Query: 296 FI 297
F+
Sbjct: 363 FL 364
>gi|124001007|ref|XP_001276924.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121918910|gb|EAY23676.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 491
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 253/462 (54%), Gaps = 50/462 (10%)
Query: 418 VQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRE 477
+Q+ +I +L GGD+L ++TGSGKTLA+ IP I L R ++KDG +I+ PTRE
Sbjct: 53 IQEQAIPILLSGGDILAAAKTGSGKTLAFLIPAIDLL--FRKNATKKDGTIVLIVAPTRE 110
Query: 478 LALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTET 537
LA Q ++ T L K T + GG++ K+E ++ GI++LVATPGRL DH T+
Sbjct: 111 LADQIFDVATLLLKD-TEVSFGAAYGGKEKKNETTLLKSGINLLVATPGRLCDHILTTKD 169
Query: 538 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMT 597
++ L++DEADRIL+ GY+ + +E + ++ Q+ L SAT T V ++A ++
Sbjct: 170 WSLENLKMLIIDEADRILEDGYKDQLHAIVEGIPSER---QTALFSATQTKDVSKIAEVS 226
Query: 598 LQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 656
++ P+ + D+ D V +L Q ++ P RL+ L + + ++
Sbjct: 227 FKHTPVYVGVDDNAD-------EVTAANLTQDCMIITPSKRLMLLITIL-------KRND 272
Query: 657 ESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLIC 716
+ K++VF T+ +H + L + NI LHG +Q +R + FR+ KSG+++C
Sbjct: 273 KKKVIVFFNTRAGVKFHHQYLKKM---NINTIALHGDQTQQKRLTSLEEFRNKKSGIMLC 329
Query: 717 TDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ 776
TDVAARGLD+ V W++QY P S +Y+HRVGR AR G G +L+ L+P+E K V+ LQ
Sbjct: 330 TDVAARGLDIEGVHWVIQYDPPQSIKEYIHRVGRCARAGKSGKALIILLPNEKKFVDRLQ 389
Query: 777 NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSA 836
++ I+ K + +++ D L+ + +A+++ K L A
Sbjct: 390 ENKVPIKVCKFPE--------------NKILD---------LRKTL-AALMEDKNLQKRA 425
Query: 837 CKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
+ +++ FY S++ ++ F+ +++ + ++S+ + P
Sbjct: 426 KEALKAFLMFYDSHT--MKDCFDVEKLDIEGVSQSYGFAEIP 465
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 6/170 (3%)
Query: 9 VQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRE 68
+Q+ +I +L GGD+L ++TGSGKTLA+ IP I L R ++KDG +I+ PTRE
Sbjct: 53 IQEQAIPILLSGGDILAAAKTGSGKTLAFLIPAIDLL--FRKNATKKDGTIVLIVAPTRE 110
Query: 69 LALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTET 128
LA Q ++ T L K T + GG++ K+E ++ GI++LVATPGRL DH T+
Sbjct: 111 LADQIFDVATLLLKD-TEVSFGAAYGGKEKKNETTLLKSGINLLVATPGRLCDHILTTKD 169
Query: 129 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ L++DEADRIL+ GY+ + +E + ++ Q+ L SAT T
Sbjct: 170 WSLENLKMLIIDEADRILEDGYKDQLHAIVEGIPSER---QTALFSATQT 216
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 21/150 (14%)
Query: 184 CKHTETLKFSKVEHL---VLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
C H T K +E+L ++DEADRIL+ GY+ + +E + ++ Q+ L SAT T
Sbjct: 161 CDHILTTKDWSLENLKMLIIDEADRILEDGYKDQLHAIVEGIPSER---QTALFSATQTK 217
Query: 241 AVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V ++A ++ ++ P+ + D+ D V +L Q ++ P RL+ L + +
Sbjct: 218 DVSKIAEVSFKHTPVYVGVDDNAD-------EVTAANLTQDCMIITPSKRLMLLITIL-- 268
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
+++ K++VF T+ +H + L
Sbjct: 269 -----KRNDKKKVIVFFNTRAGVKFHHQYL 293
>gi|194212659|ref|XP_001499618.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Equus
caballus]
Length = 874
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 451 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVSKLPIPEYALSLGLA 506
Query: 876 DAPSV 880
AP V
Sbjct: 507 VAPRV 511
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|160331560|ref|XP_001712487.1| has1 [Hemiselmis andersenii]
gi|159765935|gb|ABW98162.1| has1 [Hemiselmis andersenii]
Length = 477
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 261/466 (56%), Gaps = 54/466 (11%)
Query: 413 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T +T VQ + I + G D+L ++TGSGKT+A+ IPII+ ++ + K+GI A+II
Sbjct: 58 THLTKVQSVCIPYQICGFDILGSARTGSGKTIAFLIPIIEFFYTIQWNL--KNGISALII 115
Query: 473 LPTRELALQTLEIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
PTREL+LQ + L K SF+ V + GG K+E ++ K +ILVATPGRLLD
Sbjct: 116 TPTRELSLQNYYVLKDLLKYHSFSHGV---VMGGANKKTEIEKLEKETTILVATPGRLLD 172
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H K T+ LKF ++ L++DEADR L+ G+E +I +++L K++ Q++L SAT T +
Sbjct: 173 HLKTTKNLKFQNLQFLIIDEADRCLEIGFEEEIVAIVKLLPKKR---QTVLFSATQTRNI 229
Query: 591 QRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
Q L+ ++ Q P+ ++ + NT + ++ +++ Q F++ P+ +LV L + I
Sbjct: 230 QSLSRISFQKTPVLLEIKE-----NTREKII--ENIDQGFVICKPEDKLVFLLTLI---- 278
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
++ K++ F + + + + L V+G N+ +LHG+ Q +RT F F
Sbjct: 279 ---KKNRRKKIITFFNSCNEVKFFSALFR-VIGLNV--LELHGAKKQFKRTSTFFKFCKT 332
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSE 768
K +L CTD+AARGLD+P VDWI+Q+ P +Y+HR+GRT R H +G +LLFL PSE
Sbjct: 333 KESILFCTDIAARGLDIPAVDWILQFNPPLEPKEYIHRIGRTGRGIHGKGWALLFLYPSE 392
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ ++ L+ I ++E K ++ +SR + N
Sbjct: 393 IAFLKFLKKNNINVKEFIFKK----KKFSLLKQRISRFIEKN----------------FY 432
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
K L A K S++ Y +Y L++IF+F++I++ ++SF L
Sbjct: 433 LKKLSKLAMK---SFLNSYMNYR--LKNIFDFRKININLVSESFGL 473
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 114/177 (64%), Gaps = 10/177 (5%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T +T VQ + I + G D+L ++TGSGKT+A+ IPII+ ++ + K+GI A+II
Sbjct: 58 THLTKVQSVCIPYQICGFDILGSARTGSGKTIAFLIPIIEFFYTIQWNL--KNGISALII 115
Query: 64 LPTRELALQTLEIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
PTREL+LQ + L K SF+ V + GG K+E ++ K +ILVATPGRLLD
Sbjct: 116 TPTRELSLQNYYVLKDLLKYHSFSHGV---VMGGANKKTEIEKLEKETTILVATPGRLLD 172
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H K T+ LKF ++ L++DEADR L+ G+E +I +++L K++ Q++L SAT T
Sbjct: 173 HLKTTKNLKFQNLQFLIIDEADRCLEIGFEEEIVAIVKLLPKKR---QTVLFSATQT 226
>gi|260790599|ref|XP_002590329.1| hypothetical protein BRAFLDRAFT_279393 [Branchiostoma floridae]
gi|229275521|gb|EEN46340.1| hypothetical protein BRAFLDRAFT_279393 [Branchiostoma floridae]
Length = 689
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 270/513 (52%), Gaps = 53/513 (10%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQV---TTVQQLSIQPILDGGDVLVRSQTGSGKTLA 445
P+S ++F + P +K +G+ T VQ+ SI P L G D+L ++TGSGKTLA
Sbjct: 54 PSSIQKFSDL-PLCRKT-QQGLQAADYKFPTDVQKNSIHPALLGRDILGAAKTGSGKTLA 111
Query: 446 YAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGE 505
+ +P+++ L R + S++DG+ A+II PTRELA Q E+ K+ K + + GG+
Sbjct: 112 FLLPVLEGL--WRLQWSQQDGLGALIITPTRELAYQIFEVLRKVGKKHDFSA-GLVIGGK 168
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
+ E +I + +I++ TPGRLL H T + + ++ LVLDEADRILD G+ A
Sbjct: 169 DVTEESQQIYR-TNIVICTPGRLLQHMDETAYFEATNLQILVLDEADRILDLGF---AAT 224
Query: 566 FLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSL 625
I++ P Q++L SAT T +V+ LA ++L+NP+ I S H+ P L
Sbjct: 225 MNAIIQNLPPTRQTMLFSATQTKSVKDLARLSLKNPVYI----SVHEHH---KFSTPQKL 277
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENI 685
KQ ++V +L L SFI + SK+LVF+++ Y E L +
Sbjct: 278 KQSYLVCELHQKLDLLFSFIKNHLR-------SKVLVFLSSCKQVRYVYEAFCR-LQPGM 329
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
+ LHG M Q +R +V+ +F + L+ TD+AARGLD P V W++Q P + Y+
Sbjct: 330 SVLCLHGKMPQMKRVDVYNSFCRKQHVCLLATDIAARGLDFPAVHWVLQLDCPEDADTYI 389
Query: 746 HRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
HR GRTAR +G SLL L+PSE + ++++L +++I +E+I++
Sbjct: 390 HRAGRTARYESDGESLLVLMPSEERQMLQQLTDKKIPVEKIRVN---------------- 433
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
+ ++QM E Q + SA K + S++R Y Y + + +F+ ++
Sbjct: 434 -------PSKFYSIQMKLEVLCAQDVHMKESAQKCFVSYLRSY--YLQPNKQVFDVNKLP 484
Query: 865 LGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
L ++A S L AP V K KE+ +K+
Sbjct: 485 LENYASSLGLAVAPRVRFLQNAAKGKEKAASKE 517
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ+ SI P L G D+L ++TGSGKTLA+ +P+++ L R + S++DG+ A+II PT
Sbjct: 82 TDVQKNSIHPALLGRDILGAAKTGSGKTLAFLLPVLEGL--WRLQWSQQDGLGALIITPT 139
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA Q E+ K+ K + + GG+ + E +I + +I++ TPGRLL H T
Sbjct: 140 RELAYQIFEVLRKVGKKHDFSA-GLVIGGKDVTEESQQIYR-TNIVICTPGRLLQHMDET 197
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ + ++ LVLDEADRILD G+ A I++ P Q++L SAT T
Sbjct: 198 AYFEATNLQILVLDEADRILDLGF---AATMNAIIQNLPPTRQTMLFSATQT 246
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T + + ++ LVLDEADRILD G+ A I++ P Q++L SAT T +V+ LA
Sbjct: 197 TAYFEATNLQILVLDEADRILDLGF---AATMNAIIQNLPPTRQTMLFSATQTKSVKDLA 253
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 306
++L+NP+ I S H+ P LKQ ++V +L L SFI +
Sbjct: 254 RLSLKNPVYI----SVHEHH---KFSTPQKLKQSYLVCELHQKLDLLFSFIKNHLR---- 302
Query: 307 DEESKMLVFMATQDMADYHTE 327
SK+LVF+++ Y E
Sbjct: 303 ---SKVLVFLSSCKQVRYVYE 320
>gi|109734461|gb|AAI17787.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Mus musculus]
gi|109734859|gb|AAI17788.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Mus musculus]
Length = 600
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 258/496 (52%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 249 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 406
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 407 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLRMPRMPELRGK 469
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + K E L L
Sbjct: 146 -------EDMFRRKAEGLDL---------------------------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 265 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 297
>gi|332254329|ref|XP_003276279.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Nomascus leucogenys]
Length = 599
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 162/504 (32%), Positives = 259/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+S L + + K + S+V+ YA + +L IF K
Sbjct: 406 ------------------KLKSMALADRAVFEKGMKAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 138/327 (42%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKALEA 289
>gi|426244481|ref|XP_004016050.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Ovis aries]
Length = 878
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 257/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGVSLLALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 451 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVSKLPIPDYALSLGLA 506
Query: 876 DAPSV 880
AP +
Sbjct: 507 VAPRI 511
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSADGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|297263808|ref|XP_002798866.1| PREDICTED: ATP-dependent RNA helicase DDX55-like isoform 2 [Macaca
mulatta]
Length = 600
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 262/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVSLHPRVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + + P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASGAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ + Q K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFLRNRKQ-------EKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRNTVDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLAQGFALLRMPKMPELRGK 469
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 137/327 (41%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + + P L+ +++V + L F+ + Q
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASGAQK--TPSRLENYYMVCKADEKFNQLVHFLRNRKQ-- 267
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
K LVF +T +Y+ + L
Sbjct: 268 -----EKHLVFFSTCACVEYYGKALEA 289
>gi|193652513|ref|XP_001948824.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Acyrthosiphon pisum]
Length = 786
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 257/492 (52%), Gaps = 55/492 (11%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQV---TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
+E FP P +K G+ + T +Q+ SI L G D+L ++TGSGKTLA+ I
Sbjct: 42 FEHFPLSAPTLK-----GLKDNKYFVPTEIQRESIGYSLRGEDILGAAKTGSGKTLAFLI 96
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
P+++ L K +R +G+ A+II PTRELA Q E K+ + + GG+ +K
Sbjct: 97 PVLEIL--YCNKWNRTEGLAALIITPTRELAYQIFETLRKIGIHHDFSA-GLIIGGKDLK 153
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E+ R+ + +I++ TPGRLL H S + LVLDEADR LD G+++ + +E
Sbjct: 154 FERKRLDQ-CNIMICTPGRLLQHMDENPLFDCSNMLVLVLDEADRCLDMGFQQTMNSIIE 212
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L P+ Q++L SAT T +V+ L ++L NP I + ++ H+T P L Q
Sbjct: 213 NLP---PERQTLLFSATQTKSVKDLVRLSLSNPHLISVHEDSE-HST------PSGLVQS 262
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
++V ++ L SFI + K+LVFM++ Y E+L L +
Sbjct: 263 YMVCDLHDKMSLLWSFIKNHLHH-------KVLVFMSSCKQVKYFYEILCK-LRPGTSLL 314
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
L+G+M Q++R V+++F + VL TD+AARGLD P V+W+VQ P ++ +Y+HR
Sbjct: 315 ALYGTMHQTKRMAVYESFSRKQRSVLFATDIAARGLDFPAVNWVVQLDCPENANEYIHRA 374
Query: 749 GRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD 808
GRTAR G SLL L+PSE+ ++++L+N++I I EIK+
Sbjct: 375 GRTARFQKSGESLLVLLPSELAILKQLENKKIPISEIKVN-------------------- 414
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
T++Q + E+ + + IL SA + + S+++ + + + +F+ + F
Sbjct: 415 ---PNKLTSIQRTLEATLAKDHILKESAQRAFVSYIK--SVFLMKDKSVFDVSALDTDSF 469
Query: 869 AKSFALRDAPSV 880
A S L P V
Sbjct: 470 ASSLGLAIPPRV 481
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L K +R +G+ A+II PT
Sbjct: 64 TEIQRESIGYSLRGEDILGAAKTGSGKTLAFLIPVLEIL--YCNKWNRTEGLAALIITPT 121
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA Q E K+ + + GG+ +K E+ R+ + +I++ TPGRLL H
Sbjct: 122 RELAYQIFETLRKIGIHHDFSA-GLIIGGKDLKFERKRLDQ-CNIMICTPGRLLQHMDEN 179
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
S + LVLDEADR LD G+++ + +E L P+ Q++L SAT T +
Sbjct: 180 PLFDCSNMLVLVLDEADRCLDMGFQQTMNSIIENL---PPERQTLLFSATQTKS 230
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADR LD G+++ + +E L P+ Q++L SAT T +V+ L ++L NP I
Sbjct: 190 LVLDEADRCLDMGFQQTMNSIIENL---PPERQTLLFSATQTKSVKDLVRLSLSNPHLIS 246
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ ++ H+T P L Q ++V ++ L SFI + K+LVFM+
Sbjct: 247 VHEDSE-HST------PSGLVQSYMVCDLHDKMSLLWSFIKNHLHH-------KVLVFMS 292
Query: 318 TQDMADYHTELL 329
+ Y E+L
Sbjct: 293 SCKQVKYFYEIL 304
>gi|156101247|ref|XP_001616317.1| DEAD/DEAH box ATP-dependent RNA helicase [Plasmodium vivax Sal-1]
gi|148805191|gb|EDL46590.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
vivax]
Length = 599
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 163/514 (31%), Positives = 271/514 (52%), Gaps = 54/514 (10%)
Query: 368 NPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPIL 427
N ++ P +++ E ++ T +E+ I +KK L E +N +T +Q I L
Sbjct: 125 NHNVEGNPPSKVE-TKETFYSQTKFEDLD-ICEALKKGLKE-LNFVTLTEIQAKCIPHFL 181
Query: 428 DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFT 487
+G D+L ++TGSGKTLA+ +P I L + K K+G +II PTREL LQ ++
Sbjct: 182 NGKDILGAAKTGSGKTLAFLVPSINILYNI--KFLPKNGTGVLIISPTRELCLQIYQVCK 239
Query: 488 KLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLV 547
LCK + + GG EK + GI+IL+ATPGRLLDH ++T+ + + L+
Sbjct: 240 DLCK-YIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFIYKNLISLI 298
Query: 548 LDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAA 607
+DEADR+L G+E +I ++ L K++ Q+ L SAT T V+ L ++LQ PI I+
Sbjct: 299 IDEADRLLQIGFEEEINLIVKRLPKKR---QTALFSATQTTKVENLIRLSLQKPIFIEV- 354
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQ 667
T + + L+Q + + R + L +F+ +N+++ K++VF
Sbjct: 355 --------TTKIATVERLQQGYALVDEDKRFLLLFTFLK---RNISK----KIMVFFNNC 399
Query: 668 DMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLP 727
++ +LL+ + +I F +HG Q++R + F F + +S +L+CT+VAARGLD+P
Sbjct: 400 MSVQFYNDLLNYI---DIPTFCIHGKKKQNKRLKSFSEFSAAQSAILLCTNVAARGLDIP 456
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
V++I+QY P S +Y+HRVGRT R GS+++FL+ E+K + L+ I I +
Sbjct: 457 NVNYIIQYDPPDDSKEYIHRVGRTCRGKDSSGSAIIFLMKHELKFLNYLKFYNIPINQFA 516
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
D S+L + +Q ES V + LH A + + S++
Sbjct: 517 Y--------------DPSKLIN---------VQSHIESIVTKNFHLHKMAREAFKSYLNG 553
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Y +Y+ L+ +F+ ++L +K+F L P V
Sbjct: 554 YITYA--LKDVFDVNNLNLLLTSKNFGLEAPPKV 585
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N +T +Q I L+G D+L ++TGSGKTLA+ +P I L + K K+G
Sbjct: 164 LNFVTLTEIQAKCIPHFLNGKDILGAAKTGSGKTLAFLVPSINILYNI--KFLPKNGTGV 221
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL LQ ++ LCK + + GG EK + GI+IL+ATPGRLL
Sbjct: 222 LIISPTRELCLQIYQVCKDLCK-YIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLL 280
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + L++DEADR+L G+E +I ++ L K++ Q+ L SAT T
Sbjct: 281 DHMQNTKEFIYKNLISLIIDEADRLLQIGFEEEINLIVKRLPKKR---QTALFSATQT 335
>gi|410971865|ref|XP_004001580.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX10 [Felis catus]
Length = 881
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 254/485 (52%), Gaps = 45/485 (9%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + + +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYRAMLXXXXXXXTLEQNYIVCELQQ 306
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
+ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 307 KXSVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 358
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F K+ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 359 MRRMEVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 418
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EI++ + +L D
Sbjct: 419 DGEALLILLPSEEKGMVQQLLQKKVPVKEIRI--------------NPEKLID------- 457
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 458 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVSKLPIPEYALSLGLA 513
Query: 876 DAPSV 880
AP V
Sbjct: 514 VAPRV 518
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + + +L+Q++IV + + L S
Sbjct: 254 ATQTKSVKDLARLSLKNPEYVWVHEKAKYRAMLXXXXXXXTLEQNYIVCELQQKXSVLYS 313
Query: 296 FI 297
F+
Sbjct: 314 FL 315
>gi|12856848|dbj|BAB30802.1| unnamed protein product [Mus musculus]
Length = 499
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 257/496 (51%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + +T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 249 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 406
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 407 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLRMPRMPELRGK 469
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 151/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGR
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR- 144
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
L+ + R AE L++
Sbjct: 145 --------------------------LEDMFRRK-AEGLDL------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + +T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAATSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 265 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 297
>gi|403418786|emb|CCM05486.1| predicted protein [Fibroporia radiculosa]
Length = 568
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 267/521 (51%), Gaps = 61/521 (11%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
++T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A+I
Sbjct: 74 FVKMTDIQAKSLSISLKGKDVLGAARTGSGKTLAFLIPVLEML--YRRKWGPQDGLGALI 131
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
I PTRELA+Q ++ + + + GG+ + E+ R+ + ++ILVATPGRLL H
Sbjct: 132 ISPTRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNLNDERERLSR-MNILVATPGRLLQH 189
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
T + ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T +V
Sbjct: 190 MDQTIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFSATQTNSVS 246
Query: 592 RLAGMTLQNPI-----QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
LA ++L++P+ ++D+A +T P SL+QH++V +L L SFI
Sbjct: 247 DLARLSLKDPVYVGVQELDSAGAT-----------PKSLEQHYVVCELDKKLDILWSFIK 295
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
QN K+LVF+++ + E + + +LHG Q R F+ F
Sbjct: 296 AHLQN-------KVLVFLSSCKQVRFVFETFCK-MHPGVPLLQLHGKQKQMTRLSTFQRF 347
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
++K VL TD+AARGLD P VDW++Q AP + Y+HRVGRTAR G LLF++P
Sbjct: 348 TTMKHAVLFATDIAARGLDFPSVDWVLQVDAPEDAETYIHRVGRTARYESSGKGLLFVVP 407
Query: 767 SEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
SE + L+ + I +E+IK+K + +++ ++
Sbjct: 408 SEEDGMRRALEKKNIVVEKIKIK-----------------------ASKTQSIENQLQNL 444
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
Q + + + S++R + + + + IF ++ + FA++ L P I +G
Sbjct: 445 AFQDPEIKYLGQRAFVSYLR--SVFLQKDKSIFKLNELPVERFAEALGLPGMPK-IKFLG 501
Query: 886 KPKNKEELKNKKMAINKEKSF--KQRGNFSKKQMLSEFDSG 924
K K++ KN AI +S Q+ N ++ D G
Sbjct: 502 KEMAKKK-KNASHAIIAPESVLSNQKANLLDSELGESEDEG 541
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
++T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A+I
Sbjct: 74 FVKMTDIQAKSLSISLKGKDVLGAARTGSGKTLAFLIPVLEML--YRRKWGPQDGLGALI 131
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q ++ + + + GG+ + E+ R+ + ++ILVATPGRLL H
Sbjct: 132 ISPTRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNLNDERERLSR-MNILVATPGRLLQH 189
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T
Sbjct: 190 MDQTIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFSATQT 242
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 28/148 (18%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G++R ++ L L K + Q++L S
Sbjct: 182 TPGRLLQHMDQTIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSR---QTLLFS 238
Query: 236 ATLTPAVQRLAGMTLQNPI-----QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 290
AT T +V LA ++L++P+ ++D+A +T P SL+QH++V +L
Sbjct: 239 ATQTNSVSDLARLSLKDPVYVGVQELDSAGAT-----------PKSLEQHYVVCELDKKL 287
Query: 291 VALASFILGKCQNVNEDEESKMLVFMAT 318
L SFI QN K+LVF+++
Sbjct: 288 DILWSFIKAHLQN-------KVLVFLSS 308
>gi|50307015|ref|XP_453485.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606431|sp|Q6CRF4.1|DBP4_KLULA RecName: Full=ATP-dependent RNA helicase DBP4
gi|49642619|emb|CAH00581.1| KLLA0D09504p [Kluyveromyces lactis]
Length = 770
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 256/493 (51%), Gaps = 44/493 (8%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E I ++T +Q+ SI L G DVL ++TGSGKTLA+ IP+I+KL R K +
Sbjct: 54 KGLKEAAFI-KLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEKL--YREKWTD 110
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+II PTRELA+Q E+ +K+ K T+ + GG+ + EK RI + I+IL+
Sbjct: 111 MDGLGALIISPTRELAMQIYEVLSKIGKHTTFSA-GLVIGGKDVTFEKERISR-INILIG 168
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+L H S ++ LVLDEADR LD G++R + + L + Q++L S
Sbjct: 169 TPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFKRTLDAIINNLPASR---QTLLFS 225
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + ++ LA ++L + Q+ + ++ N S P+SL+Q +I P +L L S
Sbjct: 226 ATQSQSLDDLARLSLTDYKQVG---TMEVLNANSSSATPESLQQSYIEVPLPDKLDILFS 282
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SK++VF+++ + E L I+ LHG Q+ RTE
Sbjct: 283 FIKSHLK-------SKLIVFLSSSKQVHFVYETFRK-LQPGISLMHLHGRQKQTARTETL 334
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TDV ARG+D P VDW++Q P Y+HRVGR AR G EG SL+
Sbjct: 335 DKFSRAQHVCLFSTDVVARGIDFPSVDWVIQVDCPEDVDTYIHRVGRAARFGKEGKSLIM 394
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L P E EE +R++ + I + SRL + + Q+ +
Sbjct: 395 LTPEE----EEGFLKRLKTKNI----------------EPSRLNIKQSKKKSIKPQL--Q 432
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + + L K + S+VR + Y + + +F+F +I L FA S L AP + +
Sbjct: 433 SLLFKDPELKYLGQKAFISYVR--SIYIQKDKEVFHFDKIPLEQFANSLGLPGAPKIKMR 490
Query: 883 GIGKPKNKEELKN 895
G+ + +ELKN
Sbjct: 491 GMKSIEKAKELKN 503
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 107/172 (62%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G DVL ++TGSGKTLA+ IP+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEKL--YREKWTDMDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ +K+ K T+ + GG+ + EK RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLSKIGKHTTFSA-GLVIGGKDVTFEKERISR-INILIGTPGRILQHMD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
S ++ LVLDEADR LD G++R + + L + Q++L SAT
Sbjct: 179 QAVGFNTSNLQLLVLDEADRCLDMGFKRTLDAIINNLPASR---QTLLFSAT 227
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP + + F S ++ LVLDEADR LD G++R + + L + Q++L S
Sbjct: 169 TPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFKRTLDAIINNLPASR---QTLLFS 225
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + ++ LA ++L + Q+ + ++ N S P+SL+Q +I P +L L S
Sbjct: 226 ATQSQSLDDLARLSLTDYKQV---GTMEVLNANSSSATPESLQQSYIEVPLPDKLDILFS 282
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 283 FIKSHLK-------SKLIVFLSS 298
>gi|328779882|ref|XP_397167.4| PREDICTED: probable ATP-dependent RNA helicase pitchoune [Apis
mellifera]
Length = 460
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 246/465 (52%), Gaps = 51/465 (10%)
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
+MR K + ++G VII PTREL++QT + +L K + L GG ++E ++
Sbjct: 24 KMREKQT-QNGTGCVIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLS 81
Query: 516 KGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 575
KGI+I+VATPGRLLDH ++T + ++ L++DEADRILD G+E ++ + + IL K++
Sbjct: 82 KGINIVVATPGRLLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKKR- 140
Query: 576 QFQSILLSATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPP 634
Q++L SAT T + L + L+ P+ + D + + L+Q ++V P
Sbjct: 141 --QTMLFSATQTKKTEMLMTLALKKEPVYVGVDDDKEKATV-------EGLEQGYVVCPS 191
Query: 635 KLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSM 694
+ R + L +F+ ++ + K++VF ++ YH ELL+ + ++ +HG
Sbjct: 192 EKRFLLLFTFL-------KKNRKKKIMVFFSSCMSVKYHHELLNYI---DLPVLSIHGKQ 241
Query: 695 SQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR- 753
Q++RT F F + SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR
Sbjct: 242 KQTKRTTTFFQFCNASSGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARG 301
Query: 754 VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVET 813
G G +LL L P E+ + L+ ++ + E +++AD
Sbjct: 302 EGSSGHALLILRPEELGFLRYLKQAKVPVNEFDF--------------SWNKIAD----- 342
Query: 814 AATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFA 873
+Q+ E V + L+ SA + + ++VR Y S+ L+ IFN + + L AKSF
Sbjct: 343 ----IQLQLEKLVSKNYFLNMSAKEAFKAYVRAYDSHH--LKQIFNIETLDLAKVAKSFG 396
Query: 874 LRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML 918
P+V +G KN K++ FK N + ++ L
Sbjct: 397 FVVPPAVDLKVGINKNSRP--RKRLCEGGYGYFKNINNLNSEKQL 439
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 113/202 (55%), Gaps = 15/202 (7%)
Query: 47 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 106
+MR K + ++G VII PTREL++QT + +L K + L GG ++E ++
Sbjct: 24 KMREKQT-QNGTGCVIISPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLS 81
Query: 107 KGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 166
KGI+I+VATPGRLLDH ++T + ++ L++DEADRILD G+E ++ + + IL K++
Sbjct: 82 KGINIVVATPGRLLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKKR- 140
Query: 167 QFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAE 217
Q++L SAT T T T LK V V D+ ++ L+QGY E+
Sbjct: 141 --QTMLFSATQTKKTEML-MTLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLL 197
Query: 218 FLEILKKQKPQFQSVLLSATLT 239
LKK + + V S+ ++
Sbjct: 198 LFTFLKKNRKKKIMVFFSSCMS 219
>gi|162606354|ref|XP_001713207.1| putative RNA-dependent helicase [Guillardia theta]
gi|12580673|emb|CAC26990.1| putative RNA-dependent helicase [Guillardia theta]
Length = 469
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 256/470 (54%), Gaps = 57/470 (12%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +T +Q +SI + G D++ S TGSGKTLA+ IP I+ L + K S I +I
Sbjct: 52 FTHLTKIQSVSIPFQICGFDIIGSSSTGSGKTLAFLIPSIEFLHTTKWKSSLGTAI--II 109
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVP---SWLTGGEKMKSEKARIRKGISILVATPGRL 528
I PTRELA+QT IF K F+ I + GG KSE ++ G+ I + TPGRL
Sbjct: 110 ISPTRELAVQTYYIF----KDFSTIHQYRYGLMIGGSNKKSETEKVSTGLDIAICTPGRL 165
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH + KF ++ L++DEADR L+ G+E +I L ++ K+K Q+I+ SAT T
Sbjct: 166 LDHLNTNKNFKFHNLQILIIDEADRCLEVGFEDEIKNILILIPKKK---QTIMFSATQTK 222
Query: 589 AVQRLAGMT-LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
+++ L +T + PI I + I N+ + Q F++T + ++L +F+
Sbjct: 223 SIKNLTNITFISKPIFI--GEYYKISNSRNQT------NQGFVITNQDNKFLSLITFL-- 272
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+N N+ K +VF ++ + Y+T L+S +L NI +LHG Q +R F F
Sbjct: 273 -KKNFNK----KHIVFFSSCNEVKYYT-LVSKIL--NIEVIELHGKQKQYKRIANFFKFC 324
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIP 766
K+ VL TDV+ARGLD PLVDWI+Q++ P S +Y+HR+GRT+R + ++GSS++F+ P
Sbjct: 325 KAKNSVLFSTDVSARGLDFPLVDWIIQFSPPFDSKEYIHRIGRTSRGIKNQGSSVIFIYP 384
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ ++ L+N+++++ E K+ D+S Q +
Sbjct: 385 FEIGYLKYLENKQVKLFEYKM--------------DMSNFK---------VFQSKISKLI 421
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
++ L+ A + S+++ Y +Y ++ IFN K ++L +K+F + +
Sbjct: 422 IKYPFLNKIAKDAFFSYLKSYKNYP--IKSIFNAKNLNLELISKNFGILN 469
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 105/181 (58%), Gaps = 12/181 (6%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T +T +Q +SI + G D++ S TGSGKTLA+ IP I+ L + K S I +I
Sbjct: 52 FTHLTKIQSVSIPFQICGFDIIGSSSTGSGKTLAFLIPSIEFLHTTKWKSSLGTAI--II 109
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVP---SWLTGGEKMKSEKARIRKGISILVATPGRL 119
I PTRELA+QT IF K F+ I + GG KSE ++ G+ I + TPGRL
Sbjct: 110 ISPTRELAVQTYYIF----KDFSTIHQYRYGLMIGGSNKKSETEKVSTGLDIAICTPGRL 165
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
LDH + KF ++ L++DEADR L+ G+E +I L ++ K+K Q+I+ SAT T
Sbjct: 166 LDHLNTNKNFKFHNLQILIIDEADRCLEVGFEDEIKNILILIPKKK---QTIMFSATQTK 222
Query: 180 A 180
+
Sbjct: 223 S 223
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 19/141 (13%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
+ KF ++ L++DEADR L+ G+E +I L ++ K+K Q+++ SAT T +++ L
Sbjct: 172 NKNFKFHNLQILIIDEADRCLEVGFEDEIKNILILIPKKK---QTIMFSATQTKSIKNLT 228
Query: 247 GMT-LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
+T + PI I + I N+ + Q F++T + ++L +F+ +N N
Sbjct: 229 NITFISKPIFI--GEYYKISNSR------NQTNQGFVITNQDNKFLSLITFL---KKNFN 277
Query: 306 EDEESKMLVFMATQDMADYHT 326
+ K +VF ++ + Y+T
Sbjct: 278 K----KHIVFFSSCNEVKYYT 294
>gi|355564806|gb|EHH21306.1| hypothetical protein EGK_04327 [Macaca mulatta]
gi|383412655|gb|AFH29541.1| ATP-dependent RNA helicase DDX55 [Macaca mulatta]
Length = 600
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 262/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVSLHPRVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + + P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASGAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRNTVDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLAQGFALLRMPKMPELRGK 469
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 137/327 (41%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + + P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASGAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKALEA 289
>gi|348690262|gb|EGZ30076.1| hypothetical protein PHYSODRAFT_538218 [Phytophthora sojae]
Length = 466
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 261/473 (55%), Gaps = 64/473 (13%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q SI+P+L G D+L ++TGSGKTL++ IP ++ L ++R + + G
Sbjct: 1 MGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVR--FTARKGTGC 58
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +CK + + GG ++E R+ KG++IL++TPGRLL
Sbjct: 59 IVISPTRELALQIYGVVRDICKYHSQ-THGIVMGGANRRAEAERLVKGVNILISTPGRLL 117
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + ++ +L+E +I+ + + K++ Q++L SAT T
Sbjct: 118 DHLQNTKAFIYHNLQ--ILEEMRQII------------KCIPKER---QTMLFSATQTKK 160
Query: 590 VQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA +++ + P+ + + D+ +L+Q ++VTP R + L +F+
Sbjct: 161 VEDLARLSIKEKPVYVGVEEE-------DTKATVATLEQGYVVTPSDKRFLLLFTFL--- 210
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ ++ ELL+ + +I +HG Q++RT F F +
Sbjct: 211 ----KKNLKKKVMVFFSSCSAVKFYGELLNYI---DIPVLDIHGKQKQNKRTTTFFQFCN 263
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K+G+L+CTDVAARGLD+P VDWI+Q+ P +Y+HRVGRTAR +G +LL L+P
Sbjct: 264 AKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPD 323
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ ++ L+ ++ + E E +S++A NVE+ L V
Sbjct: 324 ELGFLKYLKASKVALNE--------------YEFPVSKIA--NVESQLMKL-------VE 360
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ LH SA Y ++ YAS+S L+ IF+ ++ L AKSF L+ P V
Sbjct: 361 KTYYLHKSAKDAYRGYLLAYASHS--LKGIFDVGRLDLQGVAKSFGLQVPPKV 411
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q SI+P+L G D+L ++TGSGKTL++ IP ++ L ++R + + G
Sbjct: 1 MGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVR--FTARKGTGC 58
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +CK + + GG ++E R+ KG++IL++TPGRLL
Sbjct: 59 IVISPTRELALQIYGVVRDICKYHSQ-THGIVMGGANRRAEAERLVKGVNILISTPGRLL 117
Query: 121 DHCKHTETLKFSKVEHLVLDEADRIL 146
DH ++T+ + ++ +L+E +I+
Sbjct: 118 DHLQNTKAFIYHNLQ--ILEEMRQII 141
>gi|322780836|gb|EFZ10065.1| hypothetical protein SINV_10370 [Solenopsis invicta]
Length = 582
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 258/481 (53%), Gaps = 55/481 (11%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ I +L+G DV V + TGSGKTLA+ IP+++ LQ+ K + A+I+ P
Sbjct: 29 MTPVQAACIPLLLNGKDVAVEAVTGSGKTLAFLIPLLEILQKRSEKWKIME-TGAIIVSP 87
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA Q EI + K + L GG +K + ++KG +I+VATPGRL D +
Sbjct: 88 TRELATQISEILGEFLKEIPSLKQVLLVGGVTLKKDVETLKKGANIIVATPGRLEDVLSN 147
Query: 535 TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
++ + +E VLDEADR+LD G+ + L L + + ++ L SAT T V
Sbjct: 148 RNSIGLNLCVKSLEFFVLDEADRLLDLGFSVTLDSILSYLPRLR---RTGLFSATQTKQV 204
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI--LGK 648
Q+L L+NP I + ++I P +LK +F + P+ +L + FI +G
Sbjct: 205 QQLIRAGLRNPALIVVKEKSNIST-------PINLKNNFTIVQPEYKLPVMIDFIRSIG- 256
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
E+K ++F+ T DY + ++ VL +I LHG M +S+R +VF FRS
Sbjct: 257 -------FETKYMIFLPTCACVDYFSRVIQAVL-PSINVLALHGKM-KSKRYKVFDKFRS 307
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+SG+LICTDV ARG+D+ +DW++QY P ++ +VHR GRTAR+G+EG++LLFL+ +E
Sbjct: 308 AQSGILICTDVMARGIDISEIDWVLQYDPPCVASSFVHRCGRTARIGNEGNALLFLLETE 367
Query: 769 VKLVEEL-QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
V+ + +N+++ + + ME +L + +T LQ + +
Sbjct: 368 SAYVDFIKRNQKVELHQ--------------MERELDK------DTVDECLQCMRQ---M 404
Query: 828 QQK--ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
QQK ++ A + + S+V+ Y+ + +L I K I LG A F L P + G
Sbjct: 405 QQKDRLVFDKANRAFVSYVQAYSKHECNL--ILQLKDIDLGKLAMGFGLLRMPKMPELKG 462
Query: 886 K 886
K
Sbjct: 463 K 463
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 99/177 (55%), Gaps = 8/177 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ I +L+G DV V + TGSGKTLA+ IP+++ LQ+ K + A+I+ P
Sbjct: 29 MTPVQAACIPLLLNGKDVAVEAVTGSGKTLAFLIPLLEILQKRSEKWKIME-TGAIIVSP 87
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q EI + K + L GG +K + ++KG +I+VATPGRL D +
Sbjct: 88 TRELATQISEILGEFLKEIPSLKQVLLVGGVTLKKDVETLKKGANIIVATPGRLEDVLSN 147
Query: 126 TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ + +E VLDEADR+LD G+ + L L + + ++ L SAT T
Sbjct: 148 RNSIGLNLCVKSLEFFVLDEADRLLDLGFSVTLDSILSYLPRLR---RTGLFSATQT 201
>gi|189533973|ref|XP_001922220.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Danio rerio]
Length = 864
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 167/486 (34%), Positives = 255/486 (52%), Gaps = 54/486 (11%)
Query: 400 PFMKKNLNEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L
Sbjct: 76 PLSKKTL-KGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECL-- 132
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ A+II PTRELA QT E+ K+ K+ + + GG+ +K E +I +
Sbjct: 133 YREQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSA-GLVIGGKDLKDESEKIHR 191
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
+I++ TPGRLL H T T S + LVLDEADRILD G+ + +E L K +
Sbjct: 192 -TNIIICTPGRLLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR-- 248
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q+++V
Sbjct: 249 -QTLLFSATQTRSVKDLARLSLKDP------EYVWVHEQA-KFSTPATLEQNYVVCELHQ 300
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ Q K++VF A Y + L I+ LHG Q
Sbjct: 301 KVNMLYSFLRSHLQK-------KIIVFFACCKEVQYLFRIFCR-LRPGISVLALHGKQQQ 352
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F S VL TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 353 MKRVEVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKE 412
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL L+PSE K ++ +LQ +++ I +I++ + L+SV
Sbjct: 413 GGEALLVLLPSEEKGMISQLQEKKVPINKIQVNP--EKLMSV------------------ 452
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
Q E+ + Q+K A + + S++R Y +KD +F+ Q+ L +A S L
Sbjct: 453 ---QQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNKD---VFDVLQLKLPEYAMSLGL 506
Query: 875 RDAPSV 880
AP V
Sbjct: 507 AVAPRV 512
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L R + + DG+ A+II
Sbjct: 92 QPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECL--YREQWTAMDGLGALIIS 149
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA QT E+ K+ K+ + + GG+ +K E +I + +I++ TPGRLL H
Sbjct: 150 PTRELAYQTFEVLRKVGKNHEFSA-GLVIGGKDLKDESEKIHR-TNIIICTPGRLLQHMD 207
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T T S + LVLDEADRILD G+ + +E L K + Q++L SAT T
Sbjct: 208 ETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR---QTLLFSATQT 258
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T T S + LVLDEADRILD G+ + +E L K + Q++L SAT T +V+ LA
Sbjct: 209 TATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR---QTLLFSATQTRSVKDLA 265
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 306
++L++P + +H P +L+Q+++V ++ L SF+ Q
Sbjct: 266 RLSLKDP------EYVWVHEQA-KFSTPATLEQNYVVCELHQKVNMLYSFLRSHLQK--- 315
Query: 307 DEESKMLVFMA 317
K++VF A
Sbjct: 316 ----KIIVFFA 322
>gi|332018823|gb|EGI59382.1| Putative ATP-dependent RNA helicase DDX55-like protein [Acromyrmex
echinatior]
Length = 589
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 259/474 (54%), Gaps = 43/474 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ I +L+G DV + TGSGKTLA+ IP+++ LQ+ K + + A+I+ P
Sbjct: 29 MTPVQIACIPLLLNGKDVAAEAVTGSGKTLAFLIPLLEILQKRNEKWKTME-VGAIIVSP 87
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q EI + K + L GG ++ + +++KG +I+VATPGRL D +
Sbjct: 88 TRELAIQISEILEEFLKRIPLLKQVLLVGGVTLQKDVEKLKKGANIIVATPGRLKDILSN 147
Query: 535 TETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
L +E LVLDEADR+LD G+ + L L + + ++ L SAT T +++
Sbjct: 148 YINLGLYIKSLEFLVLDEADRLLDLGFSATLDSILSYLPRLR---RTGLFSATQTKELEQ 204
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
L L+NP I + +++ P +LK F + P+ +L + FI ++V
Sbjct: 205 LIRAGLRNPALIVVKEKSNVST-------PVNLKNSFTIVQPEYKLPVIIDFI----RSV 253
Query: 653 NEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSG 712
++K ++F+ T DY T ++ T+L +I LHG M +S+R +VF FR ++G
Sbjct: 254 GF--KTKYMIFLPTCACVDYFTRVIQTLL-PSINVLALHGKM-KSKRYKVFDKFRYAENG 309
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLV 772
+LICTDV ARG+D+ +DW++QY PS+++ +VHR GRTAR+G+EG++LLFL+ +E V
Sbjct: 310 ILICTDVMARGIDISEIDWVLQYDPPSTASSFVHRCGRTARIGNEGNALLFLLETESAYV 369
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
+ ++ R ++++L+ +ME +L N ET LQ + +++
Sbjct: 370 DFIK----RNQKVELR---------QMEREL------NEETIDECLQ-CMRRMQQRDRLM 409
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
A + + S+V+ Y + +L I K I LG A F L P + GK
Sbjct: 410 FDKANRAFVSYVQAYNKHECNL--ILQLKDIDLGKLAMGFGLLRMPKMPELKGK 461
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 6/175 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ I +L+G DV + TGSGKTLA+ IP+++ LQ+ K + + A+I+ P
Sbjct: 29 MTPVQIACIPLLLNGKDVAAEAVTGSGKTLAFLIPLLEILQKRNEKWKTME-VGAIIVSP 87
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q EI + K + L GG ++ + +++KG +I+VATPGRL D +
Sbjct: 88 TRELAIQISEILEEFLKRIPLLKQVLLVGGVTLQKDVEKLKKGANIIVATPGRLKDILSN 147
Query: 126 TETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L +E LVLDEADR+LD G+ + L L + + ++ L SAT T
Sbjct: 148 YINLGLYIKSLEFLVLDEADRLLDLGFSATLDSILSYLPRLR---RTGLFSATQT 199
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L +E LVLDEADR+LD G+ + L L + + ++ L SAT T +++L
Sbjct: 153 LYIKSLEFLVLDEADRLLDLGFSATLDSILSYLPRLR---RTGLFSATQTKELEQLIRAG 209
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L+NP I + +++ P +LK F + P+ +L + FI ++V +
Sbjct: 210 LRNPALIVVKEKSNVST-------PVNLKNSFTIVQPEYKLPVIIDFI----RSVG--FK 256
Query: 310 SKMLVFMATQDMADYHTELLST 331
+K ++F+ T DY T ++ T
Sbjct: 257 TKYMIFLPTCACVDYFTRVIQT 278
>gi|336271030|ref|XP_003350274.1| hypothetical protein SMAC_01168 [Sordaria macrospora k-hell]
gi|380095671|emb|CCC07145.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 825
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 244/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 82 MTDVQKAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKL--YRARWTELDGLGALIISP 139
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 140 TRELAVQIFEVLRKIGRNHSFSA-GLVIGGKSLKEEAERLSR-MNILVCTPGRMLQHLDQ 197
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT + V LA
Sbjct: 198 TAGFDVDNLQILVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSATQSKRVSDLA 254
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H S P +L+QH+IVTP +L L F+ +
Sbjct: 255 RLSLKDP------EYVSVHEAAAS-ATPVNLQQHYIVTPLPEKLDTLWGFLRTNLK---- 303
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF+++ + E + I LHG Q R E+ F S K L
Sbjct: 304 ---SKIIVFLSSGKQVRFVYESFKR-MQPGIPLLHLHGRQKQIARLEITNRFTSAKYSCL 359
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + ++
Sbjct: 360 FATDVVARGVDFPAVDWVIQADCPEDADTYIHRVGRTARYESKGRAVLFLDPSEEEGFIK 419
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ + ++ +K E +++ +S Q L
Sbjct: 420 RLEQKKVHVAKVHVK-----------------------ENKKKSIKHELQSQNFQSPDLK 456
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+VR + Y + + +F F ++ L FA S L P +
Sbjct: 457 YLGQKAFVSYVR--SIYLQKDKEVFKFDKLDLDGFASSLGLPGTPQI 501
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 82 MTDVQKAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKL--YRARWTELDGLGALIISP 139
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 140 TRELAVQIFEVLRKIGRNHSFSA-GLVIGGKSLKEEAERLSR-MNILVCTPGRMLQHLDQ 197
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT
Sbjct: 198 TAGFDVDNLQILVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSAT 245
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRI+D G+++ + +E L K + Q++L SAT + V LA ++L++P
Sbjct: 209 LVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSATQSKRVSDLARLSLKDP---- 261
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +H S P +L+QH+IVTP +L L F+ + SK++VF++
Sbjct: 262 --EYVSVHEAAAS-ATPVNLQQHYIVTPLPEKLDTLWGFLRTNLK-------SKIIVFLS 311
Query: 318 T 318
+
Sbjct: 312 S 312
>gi|449295891|gb|EMC91912.1| hypothetical protein BAUCODRAFT_39058 [Baudoinia compniacensis UAMH
10762]
Length = 842
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 256/539 (47%), Gaps = 70/539 (12%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMN---ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
TS+ + P P EG+ + +T +Q +I L G D+L ++TGSGKTLA+
Sbjct: 49 TSFADLPLSAP-----TQEGLKSAAFSTLTDIQAKAIPLALKGSDILGAAKTGSGKTLAF 103
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
IP+++ L + I G+ A+II PTRELA+Q E+ + + + GG
Sbjct: 104 LIPVLENLYRAQC-IGADAGLGAMIITPTRELAIQIFEVLRTIGRKGHLFAAGLVIGGRG 162
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E+ + + ++I+V TPGR+L H T + LVLDEADRILD G++ D+
Sbjct: 163 LKEERDALSR-MNIVVCTPGRILQHLSQTAAFNVDNLRMLVLDEADRILDMGFQTDLDAI 221
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+ L + + Q++L SAT T + LA ++L P I +S S P +L+
Sbjct: 222 ITYLPRDR---QTLLFSATQTKRISDLARLSLHEPEYIAVHESA-------STATPSTLQ 271
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++++TP +L L SF+ +++K+LVF+++ + E + I
Sbjct: 272 QNYVLTPLPEKLNTLYSFL-------TTTKQAKVLVFLSSGKQVRFVYESFRR-MQPGIP 323
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R E+ + FR K L TDV ARGLD P VDW+VQ P + Y+H
Sbjct: 324 LLHLHGRQKQGARLEITEKFRRAKFSCLFATDVVARGLDFPAVDWVVQVDCPEDAETYIH 383
Query: 747 RVGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
RVGRTAR G ++LFL PS E +++ L+ +R+ IE I ++ Q
Sbjct: 384 RVGRTARFNAAGRAVLFLDPSEEAGMLKRLEAKRVPIERINVRAKKQ------------- 430
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
T++ +S Q L + + S+VR + Y + R +F + L
Sbjct: 431 ----------TSITQQLQSFCFQDPQLKYLGQRAFASYVR--SLYVQKDREVFKLQDYDL 478
Query: 866 GHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFDSG 924
FA S L AP + K E + KQR N S++ M+ E G
Sbjct: 479 EGFAASLGLPGAPRI----------------KFLKADEGAVKQRKNASRQAMVVEGGDG 521
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
+ +T +Q +I L G D+L ++TGSGKTLA+ IP+++ L + I G+ A+I
Sbjct: 69 FSTLTDIQAKAIPLALKGSDILGAAKTGSGKTLAFLIPVLENLYRAQC-IGADAGLGAMI 127
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ + + + GG +K E+ + + ++I+V TPGR+L H
Sbjct: 128 ITPTRELAIQIFEVLRTIGRKGHLFAAGLVIGGRGLKEERDALSR-MNIVVCTPGRILQH 186
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + LVLDEADRILD G++ D+ + L + + Q++L SAT T
Sbjct: 187 LSQTAAFNVDNLRMLVLDEADRILDMGFQTDLDAIITYLPRDR---QTLLFSATQT 239
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T F+ + LVLDEADRILD G++ D+ + L + + Q++L S
Sbjct: 179 TPGRILQHLSQTAAFNVDNLRMLVLDEADRILDMGFQTDLDAIITYLPRDR---QTLLFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T + LA ++L P I +S S P +L+Q++++TP +L L S
Sbjct: 236 ATQTKRISDLARLSLHEPEYIAVHESA-------STATPSTLQQNYVLTPLPEKLNTLYS 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
F+ +++K+LVF+++
Sbjct: 289 FL-------TTTKQAKVLVFLSS 304
>gi|383858854|ref|XP_003704914.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Megachile
rotundata]
Length = 786
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 266/511 (52%), Gaps = 49/511 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N +T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L + +R DG+ A+
Sbjct: 58 NYVDMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVLEIL--YCKQWTRLDGLGAL 115
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA Q E K+ + F + GG+ +K EK R+ + +I++ TPGRLL
Sbjct: 116 IITPTRELAYQIYETLRKIGQ-FHDFSAGLIIGGKDLKFEKKRVDQ-CNIIICTPGRLLQ 173
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H ++ LVLDEADR LD G+++ + +E L ++ Q++L SAT T +V
Sbjct: 174 HMDENPLFDCVNMQVLVLDEADRCLDMGFQQTMNSIIENLPSKR---QTLLFSATQTRSV 230
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L++P+ + + H T P++L+Q +I+ P + +L L SFI +
Sbjct: 231 KDLARLSLKDPMYVSVHEHA-THTT------PEALQQSYIICPLEDKLSMLWSFIRNHLK 283
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K++VF ++ Y E+ L ++ L+G++ Q R E+++TF +
Sbjct: 284 -------QKIIVFFSSCKQVKYMYEVFCR-LRPGVSLLALYGTLHQLRRMEIYETFCKKQ 335
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
VL TD+AARGLD P V+W+VQ P Y+HR GRTAR G SLL L+ SE+K
Sbjct: 336 FAVLFATDIAARGLDFPAVNWVVQMDCPEDVNAYIHRAGRTARFQSGGESLLVLLSSEIK 395
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
+VE+L+ R+I I IK+ + Q E+ + +
Sbjct: 396 MVEKLKERKIPISMIKIN-----------------------PNKLQSPQRKIEALLARDV 432
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNK 890
L SA + + ++V+ + + + IFN + ++ FA+S L P I + + + K
Sbjct: 433 SLKESAQRAFIAYVK--SVFLMKDKEIFNVRALNTDSFARSLGLA-IPPRIRFLQRMEQK 489
Query: 891 EELKNKKMAINKEKSFKQRGNFSKKQMLSEF 921
++ + K I+ + + SKKQ+ S +
Sbjct: 490 QQ-SSTKNTISDQNDENSESDNSKKQVNSNY 519
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L + +R DG+ A+
Sbjct: 58 NYVDMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVLEIL--YCKQWTRLDGLGAL 115
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA Q E K+ + F + GG+ +K EK R+ + +I++ TPGRLL
Sbjct: 116 IITPTRELAYQIYETLRKIGQ-FHDFSAGLIIGGKDLKFEKKRVDQ-CNIIICTPGRLLQ 173
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H ++ LVLDEADR LD G+++ + +E L ++ Q++L SAT T
Sbjct: 174 HMDENPLFDCVNMQVLVLDEADRCLDMGFQQTMNSIIENLPSKR---QTLLFSATQT 227
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADR LD G+++ + +E L ++ Q++L SAT T +V+ LA ++L++P+ +
Sbjct: 189 LVLDEADRCLDMGFQQTMNSIIENLPSKR---QTLLFSATQTRSVKDLARLSLKDPMYVS 245
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ H T P++L+Q +I+ P + +L L SFI + K++VF +
Sbjct: 246 VHEHA-THTT------PEALQQSYIICPLEDKLSMLWSFIRNHLK-------QKIIVFFS 291
Query: 318 TQDMADYHTELL 329
+ Y E+
Sbjct: 292 SCKQVKYMYEVF 303
>gi|367007158|ref|XP_003688309.1| hypothetical protein TPHA_0N00940 [Tetrapisispora phaffii CBS 4417]
gi|357526617|emb|CCE65875.1| hypothetical protein TPHA_0N00940 [Tetrapisispora phaffii CBS 4417]
Length = 771
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 253/494 (51%), Gaps = 44/494 (8%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K LNE + +VT +Q+ SI L G D+L ++TGSGKTLA+ IP+++KL R K S
Sbjct: 54 KGLNEA-SFVKVTEIQRDSIPISLKGHDILGAAKTGSGKTLAFLIPVLEKL--YREKWSE 110
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+II PTRELA+QT E+ TK+ + T + GG+ +K E ARI K I+IL+
Sbjct: 111 FDGLGALIISPTRELAMQTYEVLTKIG-THTSFSAGLVIGGKDVKFESARISK-INILIG 168
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+L H L S ++ LVLDEADR LD G+++ + + L P Q++L S
Sbjct: 169 TPGRILQHMDQAVGLSTSNLQMLVLDEADRCLDMGFQKTLDAIVSNLP---PTRQTLLFS 225
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + ++ LA ++L + + + + N T + P++L+Q +I +L L S
Sbjct: 226 ATQSQSLTDLARLSLTDYKTVGTQEVINEKNGT-AASTPETLQQSYITVELPDKLDILFS 284
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + SKM+VF+++ + E + I+ LHG Q RTE
Sbjct: 285 FIKSHLK-------SKMIVFLSSSKQVHFVYETFRK-MQPGISLMHLHGRQKQRARTETL 336
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TDV ARG+D P VDW+VQ P Y+HRVGR+AR G +G SL+
Sbjct: 337 DKFSRAQQVCLFATDVVARGIDFPSVDWVVQLDCPEDVDTYIHRVGRSARYGKQGKSLIM 396
Query: 764 LIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L P E ++ LQ R+I ++ +K ++ +++
Sbjct: 397 LTPQEQDAFLKRLQMRKIEPSKLNIK-----------------------QSKKRSIKAQL 433
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-I 881
+S + L K + S++R + Y + + +F F +I FA S L AP + +
Sbjct: 434 QSLLFIDPELKYLGQKAFISYIR--SIYIQKDKEVFKFDEIPTEEFAASLGLPGAPKIKM 491
Query: 882 SGIGKPKNKEELKN 895
G+ + + LKN
Sbjct: 492 KGMKSVQQSKLLKN 505
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ +VT +Q+ SI L G D+L ++TGSGKTLA+ IP+++KL R K S DG+ A+
Sbjct: 60 SFVKVTEIQRDSIPISLKGHDILGAAKTGSGKTLAFLIPVLEKL--YREKWSEFDGLGAL 117
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+QT E+ TK+ + T + GG+ +K E ARI K I+IL+ TPGR+L
Sbjct: 118 IISPTRELAMQTYEVLTKIG-THTSFSAGLVIGGKDVKFESARISK-INILIGTPGRILQ 175
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 176 HMDQAVGLSTSNLQMLVLDEADRCLDMGFQKTLDAIVSNL---PPTRQTLLFSAT 227
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + ++ LA ++
Sbjct: 183 LSTSNLQMLVLDEADRCLDMGFQKTLDAIVSNL---PPTRQTLLFSATQSQSLTDLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + + + + N T + P++L+Q +I +L L SFI +
Sbjct: 240 LTDYKTVGTQEVINEKNGT-AASTPETLQQSYITVELPDKLDILFSFIKSHLK------- 291
Query: 310 SKMLVFMAT 318
SKM+VF+++
Sbjct: 292 SKMIVFLSS 300
>gi|302809384|ref|XP_002986385.1| hypothetical protein SELMODRAFT_123861 [Selaginella moellendorffii]
gi|300145921|gb|EFJ12594.1| hypothetical protein SELMODRAFT_123861 [Selaginella moellendorffii]
Length = 593
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 256/508 (50%), Gaps = 63/508 (12%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
P + P + L + + ++ T VQ +I + DV V + TGSGKTLA+ +P+++ L+
Sbjct: 14 PKLSPETLRVLEQQLGFSRATPVQVATIPLLCSFKDVAVDAATGSGKTLAFVVPVVEILR 73
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
+ + R++ + A+II PTRELA Q + K K+ + L GG + ++ R++
Sbjct: 74 RLATPL-RRNEVGAMIISPTRELASQIFGVAQKFVKTLENLTALLLVGGTDVTADLERVK 132
Query: 516 -KGISILVATPGRLLDHCKHTETLKFSKVEH---------------------LVLDEADR 553
+G ++L+ TPGRL D + + L+F +E L+LDEADR
Sbjct: 133 EQGGNVLIGTPGRLHDIMERSTALEFRHLEARTSDLSSLDTITSLFIVSFQILILDEADR 192
Query: 554 ILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIH 613
+LD G++R ++ +E+L KQ+ ++ L SAT T AV+ L+ L+NP++++ +++
Sbjct: 193 LLDMGFQRQVSAIIELLPKQR---RTGLFSATQTQAVEELSKAGLRNPVRVEV--RSEVK 247
Query: 614 NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYH 673
+ + P L ++ + + L +F+ E+ K +V+ T DY
Sbjct: 248 GASTTFKTPAGLNIEYLECEGEEKSSQLVNFL-------RENASRKTIVYFMTCASVDYW 300
Query: 674 TELLSTVLG-ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
+L + +++ LHG M QS R + + F ++ +GVL CTDVAARGLD+P VDWI
Sbjct: 301 GTVLPRLKTLKDVPIVVLHGKMKQSVRVKALEKFTAMPAGVLFCTDVAARGLDIPGVDWI 360
Query: 733 VQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQ 792
VQY P +VHRVGRTAR+G G +L+FL+P E E L+ R + IE+ +
Sbjct: 361 VQYDPPQDPNVFVHRVGRTARMGRAGDALVFLLPKEDAYAEFLRIRNVPIEKRE------ 414
Query: 793 NLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSK 852
+T + +A ++ + + K + S+ R Y +
Sbjct: 415 -------------------KTEVPDIIPKLRAAAMKDRDVMEKGLKAFVSYFRAYKEHH- 454
Query: 853 DLRHIFNFKQIHLGHFAKSFALRDAPSV 880
IF +KQ+ LG A SF L PS+
Sbjct: 455 -CTFIFQWKQLELGKVAMSFGLLQLPSM 481
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 162/337 (48%), Gaps = 54/337 (16%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + + R++ + A
Sbjct: 28 LGFSRATPVQVATIPLLCSFKDVAVDAATGSGKTLAFVVPVVEILRRLATPL-RRNEVGA 86
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA Q + K K+ + L GG + ++ R++ +G ++L+ TPGRL
Sbjct: 87 MIISPTRELASQIFGVAQKFVKTLENLTALLLVGGTDVTADLERVKEQGGNVLIGTPGRL 146
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + + L+F +E D + LD T+T
Sbjct: 147 HDIMERSTALEFRHLEARTSDLSS--LD----------------------------TIT- 175
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+L + L+LDEADR+LD G++R ++ +E+L KQ+ ++ L SAT T
Sbjct: 176 ---------SLFIVSFQILILDEADRLLDMGFQRQVSAIIELLPKQR---RTGLFSATQT 223
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
AV+ L+ L+NP++++ +++ + + P L ++ + + L +F+
Sbjct: 224 QAVEELSKAGLRNPVRVEV--RSEVKGASTTFKTPAGLNIEYLECEGEEKSSQLVNFL-- 279
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIK 336
E+ K +V+ T DY +L K +K
Sbjct: 280 -----RENASRKTIVYFMTCASVDYWGTVLPRLKTLK 311
>gi|146414812|ref|XP_001483376.1| hypothetical protein PGUG_04105 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 258/493 (52%), Gaps = 46/493 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N +T +Q+ +I L DV+ ++TGSGKTLA+ +P+I+KL +R I+ DG+ A+
Sbjct: 65 NFVSLTDIQKKAIPVALKSEDVMGTARTGSGKTLAFLVPVIEKL--IRENITEYDGLAAL 122
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I+ PTRELA+QT E+ TK+ K + +TGG+ +K EK RI + ++IL+ TPGR+
Sbjct: 123 IVSPTRELAVQTFEVLTKIGK-YNSFSAGLVTGGKDVKYEKERISR-MNILIGTPGRISQ 180
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H ++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT + V
Sbjct: 181 HLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTR---QTLLFSATQSDNV 237
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L NP ++ + ++ + IP+SL+Q++I ++ L SF+ +
Sbjct: 238 KDLARLSLVNPKRVGVSSDQEVSS------IPESLEQYYIKISLASKMDVLWSFLKSHLK 291
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK+LVF ++ + E L I+ KL+G Q+ R E F +
Sbjct: 292 -------SKILVFFSSSKQVQFAYEAFRR-LQPGISLLKLYGRHKQTSRLETTMKFSRAQ 343
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
L TD+ ARGLD P +DW+VQ P + YVHRVGR AR G +G SLL L PSE
Sbjct: 344 HACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRAARFGRQGKSLLMLAPSE-- 401
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
EE +R+ +I LK ++++K + N + + LQ S Q
Sbjct: 402 --EEGMVKRLEAHKISLK-----MMNIKQK---------NKKVISPQLQ----SLCFQDP 441
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKN 889
L + + S+++ KD + IF +++ +AK+ L P++ I K+
Sbjct: 442 ELKNLGQRAFISYMK-SVHIQKD-KDIFKVEELPAAEYAKALGLPGTPNINIKNGAGNKD 499
Query: 890 KEELKNKKMAINK 902
K+ + + +A+ K
Sbjct: 500 KKNMSRELLALQK 512
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +T +Q+ +I L DV+ ++TGSGKTLA+ +P+I+KL +R I+ DG+ A+
Sbjct: 65 NFVSLTDIQKKAIPVALKSEDVMGTARTGSGKTLAFLVPVIEKL--IRENITEYDGLAAL 122
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA+QT E+ TK+ K + +TGG+ +K EK RI + ++IL+ TPGR+
Sbjct: 123 IVSPTRELAVQTFEVLTKIGK-YNSFSAGLVTGGKDVKYEKERISR-MNILIGTPGRISQ 180
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H ++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT
Sbjct: 181 HLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTR---QTLLFSAT 232
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT + V+ LA ++
Sbjct: 188 METSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTR---QTLLFSATQSDNVKDLARLS 244
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP ++ + ++ + IP+SL+Q++I ++ L SF+ +
Sbjct: 245 LVNPKRVGVSSDQEVSS------IPESLEQYYIKISLASKMDVLWSFLKSHLK------- 291
Query: 310 SKMLVFMATQDMADYHTE 327
SK+LVF ++ + E
Sbjct: 292 SKILVFFSSSKQVQFAYE 309
>gi|223590191|sp|A5DLF4.2|DBP4_PICGU RecName: Full=ATP-dependent RNA helicase DBP4
gi|190347685|gb|EDK40007.2| hypothetical protein PGUG_04105 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 258/493 (52%), Gaps = 46/493 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N +T +Q+ +I L DV+ ++TGSGKTLA+ +P+I+KL +R I+ DG+ A+
Sbjct: 65 NFVSLTDIQKKAIPVALKSEDVMGTARTGSGKTLAFLVPVIEKL--IRENITEYDGLAAL 122
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I+ PTRELA+QT E+ TK+ K + +TGG+ +K EK RI + ++IL+ TPGR+
Sbjct: 123 IVSPTRELAVQTFEVLTKIGK-YNSFSAGLVTGGKDVKYEKERISR-MNILIGTPGRISQ 180
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H ++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT + V
Sbjct: 181 HLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTR---QTLLFSATQSDNV 237
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L NP ++ + ++ + IP+SL+Q++I ++ L SF+ +
Sbjct: 238 KDLARLSLVNPKRVGVSSDQEVSS------IPESLEQYYIKISLASKMDVLWSFLKSHLK 291
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK+LVF ++ + E L I+ KL+G Q+ R E F +
Sbjct: 292 -------SKILVFFSSSKQVQFAYEAFRR-LQPGISLLKLYGRHKQTSRLETTMKFSRAQ 343
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
L TD+ ARGLD P +DW+VQ P + YVHRVGR AR G +G SLL L PSE
Sbjct: 344 HACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRAARFGRQGKSLLMLAPSE-- 401
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
EE +R+ +I LK ++++K + N + + LQ S Q
Sbjct: 402 --EEGMVKRLEAHKISLK-----MMNIKQK---------NKKVISPQLQ----SLCFQDP 441
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKN 889
L + + S+++ KD + IF +++ +AK+ L P++ I K+
Sbjct: 442 ELKNLGQRAFISYMK-SVHIQKD-KDIFKVEELPAAEYAKALGLPGTPNINIKNGAGNKD 499
Query: 890 KEELKNKKMAINK 902
K+ + + +A+ K
Sbjct: 500 KKNMSRELLALQK 512
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +T +Q+ +I L DV+ ++TGSGKTLA+ +P+I+KL +R I+ DG+ A+
Sbjct: 65 NFVSLTDIQKKAIPVALKSEDVMGTARTGSGKTLAFLVPVIEKL--IRENITEYDGLAAL 122
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA+QT E+ TK+ K + +TGG+ +K EK RI + ++IL+ TPGR+
Sbjct: 123 IVSPTRELAVQTFEVLTKIGK-YNSFSAGLVTGGKDVKYEKERISR-MNILIGTPGRISQ 180
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H ++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT
Sbjct: 181 HLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTR---QTLLFSAT 232
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
++ S ++ LVLDEADR LD G+ + I L L + Q++L SAT + V+ LA ++
Sbjct: 188 METSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTR---QTLLFSATQSDNVKDLARLS 244
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L NP ++ + ++ + IP+SL+Q++I ++ L SF+ +
Sbjct: 245 LVNPKRVGVSSDQEVSS------IPESLEQYYIKISLASKMDVLWSFLKSHLK------- 291
Query: 310 SKMLVFMATQDMADYHTE 327
SK+LVF ++ + E
Sbjct: 292 SKILVFFSSSKQVQFAYE 309
>gi|66810125|ref|XP_638786.1| hypothetical protein DDB_G0284017 [Dictyostelium discoideum AX4]
gi|74897069|sp|Q54Q94.1|DDX10_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx10; AltName:
Full=DEAD box protein 10
gi|60467406|gb|EAL65432.1| hypothetical protein DDB_G0284017 [Dictyostelium discoideum AX4]
Length = 878
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 269/526 (51%), Gaps = 59/526 (11%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
+ T +++ P I K L E ++T +Q+ S+ L G D+L ++TGSGKTL++
Sbjct: 139 SATDFKDLP-ISQLTLKALTES-KFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFI 196
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
+PI++ L R + R DGI A+++ PTRELA+Q ++ + K T+ + GG +
Sbjct: 197 LPILETL--WRNRWGRDDGIGAIVLSPTRELAIQIFDVLKAVGKYHTFSA-GLIIGGRNV 253
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
+ EK +I ++IL+ATPGRLL H T S ++ LVLDEADRILD G+ + + +
Sbjct: 254 QQEKDKIN-AMNILIATPGRLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIV 312
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
E L +++ Q++L SAT T +++ LA ++LQ P I + DI T P +L Q
Sbjct: 313 ENLPRER---QTLLFSATQTKSIRDLARLSLQEPEYISVYEK-DITTT------PQNLTQ 362
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
V P +++L L SFI SK++VF A+ + E +L
Sbjct: 363 TLCVIPLEMKLNMLFSFIKTHLT-------SKIIVFFASCKQVRFAHETFK-LLNPGTTL 414
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
F LHG M Q R EVF+ F K+G L TD+AARGLD P V+W++Q P Y+HR
Sbjct: 415 FPLHGKMKQWTRLEVFEDFCKKKAGTLFATDIAARGLDFPAVEWVIQVDCPDDIETYIHR 474
Query: 748 VGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS---VKMEGDLS 804
VGRTAR G S+ L+PSE KD + NL+ +K E
Sbjct: 475 VGRTARNDAPGQSITILLPSE-------------------KDGMVNLMEKQKMKFE---- 511
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
+ + N E ++ S + ++ L A K + S++R + Y + + IF ++++
Sbjct: 512 -ILEPNPE-KLVSIDSKLSSFLSEKTDLKYLAQKSFVSYLR--SVYRQSNKEIFKIQELN 567
Query: 865 LGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAI-NKEKSFKQR 909
+ F+KS L P++ G K + KNK + N +K K +
Sbjct: 568 INEFSKSLGLLGTPNIQFG----KASADSKNKSFVVSNIQKQLKDK 609
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ S+ L G D+L ++TGSGKTL++ +PI++ L R + R DGI A+++
Sbjct: 163 KLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILETL--WRNRWGRDDGIGAIVLS 220
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q ++ + K T+ + GG ++ EK +I ++IL+ATPGRLL H
Sbjct: 221 PTRELAIQIFDVLKAVGKYHTFSA-GLIIGGRNVQQEKDKIN-AMNILIATPGRLLQHMD 278
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T S ++ LVLDEADRILD G+ + + +E L +++ Q++L SAT T +
Sbjct: 279 ETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENLPRER---QTLLFSATQTKS 331
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ LVLDEADRILD G+ + + +E L +++ Q++L S
Sbjct: 269 TPGRLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENLPRER---QTLLFS 325
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +++ LA ++LQ P I + DI T P +L Q V P +++L L S
Sbjct: 326 ATQTKSIRDLARLSLQEPEYISVYEK-DITTT------PQNLTQTLCVIPLEMKLNMLFS 378
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI SK++VF A+
Sbjct: 379 FIKTHLT-------SKIIVFFAS 394
>gi|354481236|ref|XP_003502808.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Cricetulus
griseus]
gi|344243626|gb|EGV99729.1| putative ATP-dependent RNA helicase DDX10 [Cricetulus griseus]
Length = 877
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 256/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLIPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P I +H P +L+Q++IV
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKDPEYIW------VHEKA-KYSTPATLEQNYIVCELHQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLFSFLRSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFLRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE + +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEQGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + +FN ++ + +A S L
Sbjct: 451 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFNVSKLPITEYALSLGLA 506
Query: 876 DAPSV 880
AP +
Sbjct: 507 VAPRI 511
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLIPVLEAL--YRLQWTSADGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P I +H P +L+Q++IV ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDPEYI------WVHEKA-KYSTPATLEQNYIVCELHQKISVLFS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|406865242|gb|EKD18284.1| ATP-dependent RNA helicase DBP4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1104
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 274/520 (52%), Gaps = 54/520 (10%)
Query: 402 MKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
+ K + G+ ++ +T +Q ++ L G D+L ++TGSGKTLA+ IP+++ L R
Sbjct: 56 LSKPTSSGLEVSHFKTLTDIQSKAVPLALKGKDILGAAKTGSGKTLAFLIPVLENL--YR 113
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGI 518
K + DG+ A+II PTRELA Q ++ K+ ++ ++ + GG ++ E+ R+ + +
Sbjct: 114 QKWTEMDGLGALIISPTRELATQIFQVLRKIGRNHSFSA-GLIIGGRSLQEERERLGR-M 171
Query: 519 SILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ 578
+ILV TPGR+L H T S ++ LVLDEADRI+D G++RD+ +E L K++ Q
Sbjct: 172 NILVCTPGRILQHMDQTADFDVSHLQMLVLDEADRIMDMGFQRDVDAIVEHLPKER---Q 228
Query: 579 SILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 638
++L SAT T V LA ++L++P + +H S P +L+Q+ +VTP +L
Sbjct: 229 TMLFSATQTKKVSDLARLSLRDP------EYVAVHEAATS-ATPTTLQQYVVVTPLAEKL 281
Query: 639 VALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSE 698
L SFI + +K++VFM++ + E + I LHG QS
Sbjct: 282 NTLFSFIRNNLK-------AKIIVFMSSGKQVRFIYESFRH-MQPGIPLLHLHGRQKQSA 333
Query: 699 RTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEG 758
R ++ F S K+ + TDV ARGLD P VDW++Q P + Y+HRVGRTAR G
Sbjct: 334 RLDITSKFSSSKNSCIFATDVVARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERAG 393
Query: 759 SSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATA 817
++LFL PSE + +++ L+++++ I++ K + LQ + +++
Sbjct: 394 KAVLFLDPSEEEGMLKRLEHKKVPIQKTKPRQKLQQSIKNQLQ----------------- 436
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
M F+ + K L K +TS+ + + Y + + F + L FA S L A
Sbjct: 437 -DMCFKYPEI--KYL---GQKAFTSYAK--SIYLQKDKETFKINEYDLEGFADSMGLPGA 488
Query: 878 PSVISGIGKPKNKEELKNK-KMAINKEKSFKQRGNFSKKQ 916
P + K + ++LKN + A++ + ++ G + K+
Sbjct: 489 PKI--KFQKGNDTKDLKNAPRRALSSDDDSEEEGAKAPKK 526
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 110/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q ++ L G D+L ++TGSGKTLA+ IP+++ L R K + DG+ A+II P
Sbjct: 72 LTDIQSKAVPLALKGKDILGAAKTGSGKTLAFLIPVLENL--YRQKWTEMDGLGALIISP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q ++ K+ ++ ++ + GG ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELATQIFQVLRKIGRNHSFSA-GLIIGGRSLQEERERLGR-MNILVCTPGRILQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRI+D G++RD+ +E L K++ Q++L SAT T
Sbjct: 188 TADFDVSHLQMLVLDEADRIMDMGFQRDVDAIVEHLPKER---QTMLFSATQT 237
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T S ++ LVLDEADRI+D G++RD+ +E L K++ Q++L SAT T V L
Sbjct: 187 QTADFDVSHLQMLVLDEADRIMDMGFQRDVDAIVEHLPKER---QTMLFSATQTKKVSDL 243
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + +H S P +L+Q+ +VTP +L L SFI +
Sbjct: 244 ARLSLRDP------EYVAVHEAATS-ATPTTLQQYVVVTPLAEKLNTLFSFIRNNLK--- 293
Query: 306 EDEESKMLVFMAT 318
+K++VFM++
Sbjct: 294 ----AKIIVFMSS 302
>gi|387593307|gb|EIJ88331.1| hypothetical protein NEQG_01775 [Nematocida parisii ERTm3]
gi|387595980|gb|EIJ93602.1| hypothetical protein NEPG_01174 [Nematocida parisii ERTm1]
Length = 445
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 253/485 (52%), Gaps = 61/485 (12%)
Query: 400 PFMKKNLNE---GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL-Q 455
PF+ +++ + M IT++T +QQ +I + G D+L + TGSGKTL++ IP +KL
Sbjct: 10 PFISRSIRKQLKKMEITKLTEIQQQAIPYAIKGRDLLGIANTGSGKTLSFLIPAAEKLIP 69
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
E KI + ++I PTRELA+QT + KL + I GG K E +++
Sbjct: 70 EKEVKIPK-----VLVIAPTRELAMQTSRVSQKLFAEYPGIRTVLFVGGTKKADELEQMK 124
Query: 516 KGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP 575
KG +ILV TPGRLLDH K L K+E VLDE+DRILD G+E+D++E L L K++
Sbjct: 125 KGCAILVCTPGRLLDHLK--SGLSLQKIEMAVLDESDRILDIGFEKDMSEILTYLPKKR- 181
Query: 576 QFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPK 635
Q+++ SAT T V + ++ + + D + + LKQ F+ P
Sbjct: 182 --QTLMFSATNTDNVLCRSWLSKRY---------KKVQVKIDDKITAEGLKQSFVTCPED 230
Query: 636 LRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMS 695
R L SF+ + E K++VF +T +H EL S +LG + LH +
Sbjct: 231 KRFSLLFSFL--------KRTEEKVIVFFSTCASVMFHGELFS-LLGFSAGV--LHSGVK 279
Query: 696 QSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVG 755
Q R +VF F K +L TDVAARGLD+P V WIVQY P+ +Y+HRVGRTAR G
Sbjct: 280 QDRRAKVFDEFCEGKIKILFSTDVAARGLDIPNVRWIVQYDPPTDPKEYIHRVGRTARAG 339
Query: 756 HEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +L+FL+P E ++ L++ + ++E L+ D+S + ++T +
Sbjct: 340 AHGEALMFLLPHERIFIQYLKHLGVEVDE----------LTFNEPKDIS---EHFIKTIS 386
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+ + ++ A KGY ++ YA + L+ +F+ +I L AKSF L
Sbjct: 387 SNYYLERDA---------KDALKGY---LQAYAGHK--LKKVFDASKIELNKIAKSFGLS 432
Query: 876 DAPSV 880
P +
Sbjct: 433 SMPKI 437
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIY 59
M IT++T +QQ +I + G D+L + TGSGKTL++ IP +KL E KI +
Sbjct: 23 MEITKLTEIQQQAIPYAIKGRDLLGIANTGSGKTLSFLIPAAEKLIPEKEVKIPK----- 77
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
++I PTRELA+QT + KL + I GG K E +++KG +ILV TPGRL
Sbjct: 78 VLVIAPTRELAMQTSRVSQKLFAEYPGIRTVLFVGGTKKADELEQMKKGCAILVCTPGRL 137
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
LDH K L K+E VLDE+DRILD G+E+D++E L L K++ Q+++ SAT T
Sbjct: 138 LDHLK--SGLSLQKIEMAVLDESDRILDIGFEKDMSEILTYLPKKR---QTLMFSATNTD 192
Query: 180 ATCWCKHTETLKFSKVE 196
C+ + ++ KV+
Sbjct: 193 -NVLCRSWLSKRYKKVQ 208
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L K+E VLDE+DRILD G+E+D++E L L K++ Q+++ SAT T V + ++
Sbjct: 145 LSLQKIEMAVLDESDRILDIGFEKDMSEILTYLPKKR---QTLMFSATNTDNVLCRSWLS 201
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
+ + D + + LKQ F+ P R L SF+ + E
Sbjct: 202 KRY---------KKVQVKIDDKITAEGLKQSFVTCPEDKRFSLLFSFL--------KRTE 244
Query: 310 SKMLVFMATQDMADYHTELLS 330
K++VF +T +H EL S
Sbjct: 245 EKVIVFFSTCASVMFHGELFS 265
>gi|41327779|ref|NP_065987.1| ATP-dependent RNA helicase DDX55 [Homo sapiens]
gi|296439376|sp|Q8NHQ9.3|DDX55_HUMAN RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|119618827|gb|EAW98421.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_c [Homo
sapiens]
gi|119618828|gb|EAW98422.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_c [Homo
sapiens]
Length = 600
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 262/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L VL +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALE-VLVK 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+K + +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|395745041|ref|XP_002823989.2| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55
[Pongo abelii]
Length = 602
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 263/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLHLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPF 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR +++G+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQTGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLHLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSAQK--TPFRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|302496482|ref|XP_003010242.1| hypothetical protein ARB_03497 [Arthroderma benhamiae CBS 112371]
gi|291173784|gb|EFE29602.1| hypothetical protein ARB_03497 [Arthroderma benhamiae CBS 112371]
Length = 542
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 253/485 (52%), Gaps = 73/485 (15%)
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
GM T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 107 GMGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTG 164
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRL
Sbjct: 165 ALIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRL 223
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K+ Q++L SAT T
Sbjct: 224 LDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKE--DRQTMLFSATQTT 281
Query: 589 AVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V+ LA ++L+ P+ I+ D H+T D ++Q FI+ R + L SF+
Sbjct: 282 KVEDLARISLKPGPLYIN-VDHKKEHSTV------DGVEQGFIICEAHKRFLLLFSFL-- 332
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ + Y++ELL+ + ++ LHG + Q +RT F F
Sbjct: 333 -----KKNAKKKIIVFFSSCNSVKYYSELLNYI---DLPVLSLHGKLKQQKRTNTFFEFC 384
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
+ G LICTDVAARGLD+P VD+IVQ P PS
Sbjct: 385 NSAQGTLICTDVAARGLDIPAVDYIVQLDPPDD-------------------------PS 419
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV + L+ R+ + E + ++++++ Q E +
Sbjct: 420 EVGFINHLREARVPVVEFEFP--TKHIINI---------------------QSQLEKLIS 456
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
Q L+ SA +GY S++ YAS+S LR +F+ ++ L AKS+ P V +G
Sbjct: 457 QNYYLNQSAKEGYRSYLHAYASHS--LRSVFDVNKLDLVKVAKSYGFTTPPRVDITLGAS 514
Query: 888 KNKEE 892
++++
Sbjct: 515 MSRDK 519
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G A
Sbjct: 108 MGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTGA 165
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG ++E ++ KG+++L+ TPGRLL
Sbjct: 166 LIITPTRELALQIFGVARELMEHHSQTY-GVVIGGANRRAEAEKLNKGVNVLIGTPGRLL 224
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K+ Q++L SAT T
Sbjct: 225 DHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKE--DRQTMLFSATQT 280
>gi|334329818|ref|XP_003341271.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 2
[Monodelphis domestica]
Length = 881
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 254/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P +K L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 74 PLSRKTL-KGLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLETL-- 130
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI +
Sbjct: 131 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDF-SAGLIIGGKDLKHESERINQ 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+IL+ TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 -INILICTPGRLLQHMDETTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 246
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L Q++++
Sbjct: 247 -QTLLFSATQTKSVKDLARLSLKDPAYVW------VHEKA-KYSTPATLDQNYVICELHQ 298
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF A+ Y + L I+ LHG Q
Sbjct: 299 KISVLYSFLKSHLK-------KKSIVFFASCKEVQYLFRVFCR-LRPGISILALHGKQQQ 350
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F KS VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 351 MRRMEVYNEFVRKKSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 410
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G SLL L+PSEVK +V +L R++ ++EIK+ + +L D
Sbjct: 411 GGESLLILLPSEVKGMVHQLSQRKVPVKEIKI--------------NPEKLID------- 449
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q E+ + Q + L A + + S++R + Y + +F+ ++ L +A S L
Sbjct: 450 --IQKKLEAFLAQDQDLKERAQRCFVSYLR--SIYLMKNKEVFDVNKLLLPEYALSLGLA 505
Query: 876 DAPSV 880
A V
Sbjct: 506 VAQRV 510
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 91 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLETL--YRLQWTSADGLGVLIISP 148
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI + I+IL+ TPGRLL H
Sbjct: 149 TRELAYQTFEVLRKVGKNHDF-SAGLIIGGKDLKHESERINQ-INILICTPGRLLQHMDE 206
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 207 TTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 258
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 196 TPGRLLQHMDETTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 252
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L Q++++ ++ L S
Sbjct: 253 ATQTKSVKDLARLSLKDPAYV------WVHEKA-KYSTPATLDQNYVICELHQKISVLYS 305
Query: 296 FI 297
F+
Sbjct: 306 FL 307
>gi|126326670|ref|XP_001371368.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Monodelphis domestica]
Length = 879
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 254/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P +K L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 74 PLSRKTL-KGLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLETL-- 130
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI +
Sbjct: 131 YRLQWTSADGLGVLIISPTRELAYQTFEVLRKVGKNHDF-SAGLIIGGKDLKHESERINQ 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+IL+ TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 -INILICTPGRLLQHMDETTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 246
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L Q++++
Sbjct: 247 -QTLLFSATQTKSVKDLARLSLKDPAYVW------VHEKA-KYSTPATLDQNYVICELHQ 298
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF A+ Y + L I+ LHG Q
Sbjct: 299 KISVLYSFLKSHLK-------KKSIVFFASCKEVQYLFRVFCR-LRPGISILALHGKQQQ 350
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F KS VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 351 MRRMEVYNEFVRKKSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 410
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G SLL L+PSEVK +V +L R++ ++EIK+ + +L D
Sbjct: 411 GGESLLILLPSEVKGMVHQLSQRKVPVKEIKI--------------NPEKLID------- 449
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q E+ + Q + L A + + S++R + Y + +F+ ++ L +A S L
Sbjct: 450 --IQKKLEAFLAQDQDLKERAQRCFVSYLR--SIYLMKNKEVFDVNKLLLPEYALSLGLA 505
Query: 876 DAPSV 880
A V
Sbjct: 506 VAQRV 510
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 91 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLETL--YRLQWTSADGLGVLIISP 148
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI + I+IL+ TPGRLL H
Sbjct: 149 TRELAYQTFEVLRKVGKNHDF-SAGLIIGGKDLKHESERINQ-INILICTPGRLLQHMDE 206
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 207 TTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 258
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 196 TPGRLLQHMDETTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 252
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L Q++++ ++ L S
Sbjct: 253 ATQTKSVKDLARLSLKDPAYV------WVHEKA-KYSTPATLDQNYVICELHQKISVLYS 305
Query: 296 FI 297
F+
Sbjct: 306 FL 307
>gi|157871728|ref|XP_001684413.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
gi|68127482|emb|CAJ05381.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
Length = 900
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 261/515 (50%), Gaps = 64/515 (12%)
Query: 377 RRLKPVSEALFAPTSYE-------EFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
R LK ++E+ A TS E E P I + L G + T +T VQ+ ++ L G
Sbjct: 49 RELKDIAESNEANTSTEHEYSKFTELP-ISQRTQMGLERG-HYTILTPVQKGTLHLALAG 106
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL + IP++++L R + S G+ A+++ PTRELALQ ++ +L
Sbjct: 107 LDVLGAAKTGSGKTLCFVIPVLERL--YRERWSSDMGVGALLLSPTRELALQIFKVM-QL 163
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
+ + LTGG ++ E+ R+ ISI+V TPGR+L H + L ++ +D
Sbjct: 164 VGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRVLHHLQDDAELVLDNLQLFCMD 222
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS 609
EADR+LD G+ I L L PQ QS+L SAT T VQ LA M+L+NP +
Sbjct: 223 EADRLLDMGFREAITSILAYLP---PQRQSLLFSATQTTDVQMLAQMSLKNPRYVSTQAI 279
Query: 610 TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDM 669
T + P +L Q+F+V +L AL F+ K++VF++T +
Sbjct: 280 T-------AAPTPMTLCQNFVVVELHKKLDALLMFL-------KRHPNDKIVVFVSTCNQ 325
Query: 670 ADYHTELLSTVLGE-NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
+ S +L + I L M Q R EVF TF KS VL CTDVA+RGLD PL
Sbjct: 326 VKFMHLAFSKILKKMRIPSMCLTSKMKQFRREEVFLTFCRCKSAVLFCTDVASRGLDFPL 385
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK 788
V W+VQY P S+ Y+HR GRTAR G G SLLFL P E ++ L ++ + + EI +K
Sbjct: 386 VHWVVQYDCPESAQTYIHRAGRTARAGARGVSLLFLTPRETPMLSYLHHKHVPLREIAIK 445
Query: 789 -DCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR-- 845
D L T+ Q F + V+Q L A K + +++R
Sbjct: 446 PDFL------------------------TSSQEIFVALVVQG--LKYEAQKAFIAYLRSV 479
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
++AS +++F + + FAKS L P +
Sbjct: 480 YFASN----KNVFEVAAVDVEAFAKSLGLPVVPDM 510
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T VQ+ ++ L G DVL ++TGSGKTL + IP++++L R + S G+ A+
Sbjct: 88 HYTILTPVQKGTLHLALAGLDVLGAAKTGSGKTLCFVIPVLERL--YRERWSSDMGVGAL 145
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
++ PTRELALQ ++ +L + + LTGG ++ E+ R+ ISI+V TPGR+L
Sbjct: 146 LLSPTRELALQIFKVM-QLVGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRVLH 203
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H + L ++ +DEADR+LD G+ I L L PQ QS+L SAT T
Sbjct: 204 HLQDDAELVLDNLQLFCMDEADRLLDMGFREAITSILAYL---PPQRQSLLFSATQT 257
>gi|255559531|ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 592
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/541 (29%), Positives = 272/541 (50%), Gaps = 68/541 (12%)
Query: 395 FPGIHPFMKKNLNEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
F +HP + +++ + T VQ +I + DV V + TGSGKTLA+ +P++
Sbjct: 18 FADLHPPLSESVVHALTQAGFEYCTPVQAATIPLLCRYKDVAVDAATGSGKTLAFVVPLV 77
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L+ + I + + +I+ PTREL+ Q + ++ + + L GG +K++
Sbjct: 78 EILRRLSSPI-KLHQVMGIILSPTRELSSQIYNVAQPFIETLSNVKSMLLVGGVDVKADV 136
Query: 512 ARIRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+I + G +IL+ TPGRL D + + L F +E L+LDEADR+LD G+++ I + L
Sbjct: 137 KKIEEEGANILIGTPGRLFDIMERVDILDFRNLEVLILDEADRLLDMGFQKQITSIISRL 196
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV-----IPDSL 625
K + ++ L SAT T AV+ LA L+NP++++ T N + S P L
Sbjct: 197 PKLR---RTGLFSATQTEAVEELAKAGLRNPVRVEVRAQTKSLNESASSQLSSSKTPSGL 253
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-EN 684
+ ++ ++ L S + N+++ K++V+ T DY +L + ++
Sbjct: 254 QLEYLECEADMKPSHLVSLL-------NKNKSKKIIVYFMTCACVDYWGVVLPRLTALKD 306
Query: 685 IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDY 744
+ LHG M Q+ R + +F S+ SG+L+CTDVAARGLD+P VD IVQY P +
Sbjct: 307 FSLIPLHGKMKQTARDKALASFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVF 366
Query: 745 VHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
+HRVGRTAR+G +GS+++FL+P E VE L+ RR+ ++E+K+ D +++
Sbjct: 367 IHRVGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLQEMKITDDAPDVVP-------- 418
Query: 805 RLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIH 864
SA + + + + + S++R Y + +IF +K++
Sbjct: 419 ----------------QIRSAAKKDRDVMEKGLRAFVSFIRAYKEHH--CSYIFRWKELE 460
Query: 865 LGHFAKSFALRDAPSV-------ISGIG--------------KPKNKEELKNKKMAINKE 903
+G + L PS+ +S +G K K++E+ + K + KE
Sbjct: 461 VGKLGMGYGLLQLPSMPEVKHHSLSTVGFTPAEDIKLEDIKFKDKSREKQRKKNLQAKKE 520
Query: 904 K 904
K
Sbjct: 521 K 521
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + I + + +I+ PT
Sbjct: 42 TPVQAATIPLLCRYKDVAVDAATGSGKTLAFVVPLVEILRRLSSPI-KLHQVMGIILSPT 100
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH 125
REL+ Q + ++ + + L GG +K++ +I + G +IL+ TPGRL D +
Sbjct: 101 RELSSQIYNVAQPFIETLSNVKSMLLVGGVDVKADVKKIEEEGANILIGTPGRLFDIMER 160
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ L F +E L+LDEADR+LD G+++ I + L K + ++ L SAT T A
Sbjct: 161 VDILDFRNLEVLILDEADRLLDMGFQKQITSIISRLPKLR---RTGLFSATQTEA 212
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 18/166 (10%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+ + L F +E L+LDEADR+LD G+++ I + L K + ++ L SAT T AV+
Sbjct: 159 ERVDILDFRNLEVLILDEADRLLDMGFQKQITSIISRLPKLR---RTGLFSATQTEAVEE 215
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLV-----IPDSLKQHFIVTPPKLRLVALASFILG 299
LA L+NP++++ T N + S P L+ ++ ++ L S +
Sbjct: 216 LAKAGLRNPVRVEVRAQTKSLNESASSQLSSSKTPSGLQLEYLECEADMKPSHLVSLL-- 273
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNIDP 345
N+++ K++V+ T DY +L ++ LK++++ P
Sbjct: 274 -----NKNKSKKIIVYFMTCACVDYWGVVLP---RLTALKDFSLIP 311
>gi|431907502|gb|ELK11354.1| Putative ATP-dependent RNA helicase DDX10 [Pteropus alecto]
Length = 715
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 260/495 (52%), Gaps = 56/495 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHEFSA-GLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 240 IENLPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 290 QNYIVCELQQKISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR +G +LL L+PSE K +V++L +++ ++ IK+ + +
Sbjct: 402 RAGRTARYKEDGEALLILLPSEEKGMVQQLLQKKVPVKAIKI--------------NPEK 447
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
L D +Q ES + Q + L A + + S++R + Y + IF+ ++ +
Sbjct: 448 LID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVSKLPI 496
Query: 866 GHFAKSFALRDAPSV 880
+A S L AP V
Sbjct: 497 PEYALSLGLAVAPRV 511
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHEFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|402895161|ref|XP_003910702.1| PREDICTED: probable ATP-dependent RNA helicase DDX10, partial
[Papio anubis]
Length = 778
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 259/494 (52%), Gaps = 55/494 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP + K +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 159 TRFSDFP-----LSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 213
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 214 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 270
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ +
Sbjct: 271 LKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAI 329
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L++P + +H P +L+
Sbjct: 330 IENLPKKR---QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLE 379
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + + L SF+ + K +VF ++ Y + L I+
Sbjct: 380 QNYIVCELQQKTSVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 431
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 432 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 491
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR +G +LL L+PSE +V++L +++ ++EIK+ + +L
Sbjct: 492 RAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKL 537
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
D +Q ES + Q + L A + + S++R + Y + +F+ ++ +
Sbjct: 538 ID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFDVSKLPIP 586
Query: 867 HFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 587 EYALSLGLAVAPRI 600
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 182 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 239
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 240 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 297
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 298 TVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 347
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 287 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 343
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++IV + + L S
Sbjct: 344 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKTSVLYS 396
Query: 296 FI 297
F+
Sbjct: 397 FL 398
>gi|20987604|gb|AAH30020.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens]
Length = 600
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 262/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDLFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L VL +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKTLE-VLVK 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+K + +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFASLARGFALLRMPKMPELRGK 469
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 138/325 (42%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 91 TRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRL----- 145
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
E L K E L L R LD
Sbjct: 146 --EDLFRRKAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKTL 287
>gi|47212209|emb|CAF94976.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1027
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 165/237 (69%), Gaps = 2/237 (0%)
Query: 352 KKTEVKSGP-ISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGM 410
KK KSGP SSLF+NNP+IP V + V E +F ++ + +HP + LN
Sbjct: 40 KKATEKSGPKTSSLFRNNPEIPQVHRATVSQVEEEIFTSDTFTQM-SLHPHLVTTLNNVF 98
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N++ VT+VQ+ +I +L G D LVRSQTGSGKTL+YAIP++Q LQ ++PK+SR DG A+
Sbjct: 99 NVSTVTSVQRQTIPVLLSGRDALVRSQTGSGKTLSYAIPVVQSLQALQPKVSRGDGPLAL 158
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I++PTRELA QT F KL K FTW+VP L GGEK K+EKAR+RKGI+ILV+TPGRL+D
Sbjct: 159 ILVPTRELAQQTFVTFQKLLKPFTWVVPGVLMGGEKRKAEKARLRKGINILVSTPGRLVD 218
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
H ++T ++ FS V LVLDEADR LD G+E+D++ L + Q++LL + L+
Sbjct: 219 HIRNTLSISFSAVRWLVLDEADRTLDLGFEKDLSVILNSVNSAASSRQNVLLVSPLS 275
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 133/178 (74%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
N++ VT+VQ+ +I +L G D LVRSQTGSGKTL+YAIP++Q LQ ++PK+SR DG A
Sbjct: 98 FNVSTVTSVQRQTIPVLLSGRDALVRSQTGSGKTLSYAIPVVQSLQALQPKVSRGDGPLA 157
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I++PTRELA QT F KL K FTW+VP L GGEK K+EKAR+RKGI+ILV+TPGRL+
Sbjct: 158 LILVPTRELAQQTFVTFQKLLKPFTWVVPGVLMGGEKRKAEKARLRKGINILVSTPGRLV 217
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T ++ FS V LVLDEADR LD G+E+D++ L + Q++LL + L+
Sbjct: 218 DHIRNTLSISFSAVRWLVLDEADRTLDLGFEKDLSVILNSVNSAASSRQNVLLVSPLS 275
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 835 SACKGYTSW-----VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKN 889
A G SW +R Y +Y L+HIF+ + +HLGH AKSFALR+AP + P
Sbjct: 914 GAPPGGGSWALQSFLRAYTTYPARLKHIFHIRSLHLGHTAKSFALREAPQALGAARLPPG 973
Query: 890 KEELKNKKMAINKEKS 905
K+ + N+ +S
Sbjct: 974 GGAKSRKRRSQNRPES 989
>gi|340372364|ref|XP_003384714.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Amphimedon queenslandica]
Length = 716
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 166/514 (32%), Positives = 271/514 (52%), Gaps = 57/514 (11%)
Query: 387 FAPTSYEEFPGIHPFMKKNLNEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
AP S E+F I P K L +G+ + +T +Q+ +I L G D+L ++TGSGKT
Sbjct: 40 MAPESMEKFTDI-PLSSKTL-QGLRKNGYSNLTDIQKAAIPSALRGKDILGAAKTGSGKT 97
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+ IP+++ L R + ++ DG+ A+II PTRELA QT ++ K+ + + G
Sbjct: 98 LAFLIPVLELL--WRERWTQMDGLGALIISPTRELAYQTFDVLYKIGGEHDFSA-GLIIG 154
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G+ + E+ARI K +I++ TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 155 GKDLGFERARILK-TNIIICTPGRLLQHMDETPNFECQSLKILVLDEADRILDLGFCETM 213
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
+E L ++ Q++L SAT T +V+ LA ++L P + +H +++ P
Sbjct: 214 RSIVENLPSER---QTLLFSATQTKSVKDLALLSLSEP------EYLSVHEESET-STPQ 263
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+Q ++V + ++ L SFI K ++F+++ + E L
Sbjct: 264 RLQQSYVVCKLEEKISTLFSFIKTHLL-------VKSIIFLSSCKQVRFTYEAFRR-LRP 315
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ L+G +Q +R V+K F K+ VL+CTD+AARGLD P V W+VQ P +
Sbjct: 316 GVPLMCLYGRQNQVKRVAVYKDFCQKKAAVLLCTDIAARGLDFPSVHWVVQLDCPEDTNT 375
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
Y+HRVGRTAR +G +LLF++PSE+++++EL ++I IEEIK+ D
Sbjct: 376 YIHRVGRTARYEKDGHALLFILPSEMEMIKELVEKKIPIEEIKI--------------DP 421
Query: 804 SRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQI 863
+L ++Q E+ Q L A K + ++R + + + + +F+ +++
Sbjct: 422 KKLV---------SIQGKLEAFCAQDTELKQLAQKSFIRYLR--SVHLQSNKKVFDVRKL 470
Query: 864 HLGHFAKSFALRDAPSVI-----SGIGKPKNKEE 892
+A S L AP + + GK +KEE
Sbjct: 471 PTSEYALSLGLSQAPRIRFLKKDTTSGKNWDKEE 504
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 117/199 (58%), Gaps = 10/199 (5%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
+ +T +Q+ +I L G D+L ++TGSGKTLA+ IP+++ L R + ++ DG+ A+II
Sbjct: 67 SNLTDIQKAAIPSALRGKDILGAAKTGSGKTLAFLIPVLELL--WRERWTQMDGLGALII 124
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA QT ++ K+ + + GG+ + E+ARI K +I++ TPGRLL H
Sbjct: 125 SPTRELAYQTFDVLYKIGGEHDFSA-GLIIGGKDLGFERARILK-TNIIICTPGRLLQHM 182
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCW 183
T + ++ LVLDEADRILD G+ + +E L ++ Q++L SAT T +
Sbjct: 183 DETPNFECQSLKILVLDEADRILDLGFCETMRSIVENLPSER---QTLLFSATQTKSV-- 237
Query: 184 CKHTETLKFSKVEHLVLDE 202
K L S+ E+L + E
Sbjct: 238 -KDLALLSLSEPEYLSVHE 255
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G+ + +E L ++ Q++L SAT T +V+ LA ++L P
Sbjct: 196 LVLDEADRILDLGFCETMRSIVENLPSER---QTLLFSATQTKSVKDLALLSLSEP---- 248
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
+ +H +++ P L+Q ++V + ++ L SFI
Sbjct: 249 --EYLSVHEESET-STPQRLQQSYVVCKLEEKISTLFSFI 285
>gi|400594285|gb|EJP62141.1| putative RNA helicase HCA4 [Beauveria bassiana ARSEF 2860]
Length = 815
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 247/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+++ P
Sbjct: 75 LTDVQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEKL--YRARWTEYDGLGALVLSP 132
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ K+ + ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 133 TRELAVQIFDVLHKIGRYHSFSA-GLVIGGKSLKEEADRLPR-MNILVCTPGRMLQHLDQ 190
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T L + ++ LVLDEADRI+D G++ + +E L + + Q+++ SAT + V LA
Sbjct: 191 TAGLDVNNLQMLVLDEADRIMDMGFQAAVDALVEHLPRGR---QTLMFSATQSKKVSDLA 247
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H S P +L+QH+IVTP +L L FI +
Sbjct: 248 RLSLKDP------EYVSVHEAAIS-ATPTNLQQHYIVTPLHEKLDTLYGFIKSSLK---- 296
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF+++ + E L L I LHG Q +R E+ F + K L
Sbjct: 297 ---SKIIVFLSSGKQVRFVYESLRH-LQPGIPLLHLHGRQKQVQRLEITNRFTAAKQACL 352
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P VDW++Q P + Y+HRVGRTAR EG ++LFL PSE +++
Sbjct: 353 FATDVVARGIDFPAVDWVIQVDCPEDTDTYIHRVGRTARFESEGRAVLFLEPSEEDGMIK 412
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
+L+ ++I I++I +K E +++ ++ Q L
Sbjct: 413 KLEQKKIPIQKINIK-----------------------EKKKRSIKNDLQNMCFQNPDLK 449
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+ R + + + + +FN K++ L +A S L P +
Sbjct: 450 YLGQKSFISYTR--SIHLQRDKEVFNLKKLDLDAYAASLGLPGTPQI 494
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+++ P
Sbjct: 75 LTDVQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEKL--YRARWTEYDGLGALVLSP 132
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ + ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 133 TRELAVQIFDVLHKIGRYHSFSA-GLVIGGKSLKEEADRLPR-MNILVCTPGRMLQHLDQ 190
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T L + ++ LVLDEADRI+D G++ + +E L + + Q+++ SAT
Sbjct: 191 TAGLDVNNLQMLVLDEADRIMDMGFQAAVDALVEHLPRGR---QTLMFSAT 238
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T L + ++ LVLDEADRI+D G++ + +E L + + Q+++ SAT + V L
Sbjct: 190 QTAGLDVNNLQMLVLDEADRIMDMGFQAAVDALVEHLPRGR---QTLMFSATQSKKVSDL 246
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + +H S P +L+QH+IVTP +L L FI +
Sbjct: 247 ARLSLKDP------EYVSVHEAAIS-ATPTNLQQHYIVTPLHEKLDTLYGFIKSSLK--- 296
Query: 306 EDEESKMLVFMAT 318
SK++VF+++
Sbjct: 297 ----SKIIVFLSS 305
>gi|340960708|gb|EGS21889.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 812
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 245/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 72 MTDIQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEKL--YRAQWTEYDGLGALIISP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHH-YFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT + V LA
Sbjct: 188 TANFDVNNLQILVLDEADRIMDMGFQQAVDALIEHLPKSR---QTLLFSATQSKRVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H + P +L+QH+IVTP +L L F+ +
Sbjct: 245 RLSLKDP------EYVSVHEAAPT-ATPATLQQHYIVTPLHEKLDTLWGFLRSNLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK+LVF+++ + E + I LHG Q R E+ F + K L
Sbjct: 294 ---SKILVFLSSGKQVRFVYESFRR-MQPGIPLLHLHGRQKQIARMEITNRFAAAKYSCL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P VDW++Q P + Y+HRVGRTAR +G ++LFL+PSE + ++
Sbjct: 350 FATDVVARGIDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAVLFLLPSEEEGFLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+++++ I+ + ++ E +++ +S Q +
Sbjct: 410 RLEHKKVPIQRVHVR-----------------------EKKKKSIKNELQSLCFQFADVK 446
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+VR + Y + + +F F + L FA+S L P +
Sbjct: 447 YLGQKAFISYVR--SVYLQKDKEVFKFDALDLDTFAESLGLPGTPQI 491
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 72 MTDIQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEKL--YRAQWTEYDGLGALIISP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHH-YFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT
Sbjct: 188 TANFDVNNLQILVLDEADRIMDMGFQQAVDALIEHLPKSR---QTLLFSAT 235
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT + V L
Sbjct: 187 QTANFDVNNLQILVLDEADRIMDMGFQQAVDALIEHLPKSR---QTLLFSATQSKRVSDL 243
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + +H + P +L+QH+IVTP +L L F+ +
Sbjct: 244 ARLSLKDP------EYVSVHEAAPT-ATPATLQQHYIVTPLHEKLDTLWGFLRSNLK--- 293
Query: 306 EDEESKMLVFMAT 318
SK+LVF+++
Sbjct: 294 ----SKILVFLSS 302
>gi|171683441|ref|XP_001906663.1| hypothetical protein [Podospora anserina S mat+]
gi|170941680|emb|CAP67334.1| unnamed protein product [Podospora anserina S mat+]
Length = 816
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 243/468 (51%), Gaps = 50/468 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL ++ + + DG+ A+II P
Sbjct: 85 LTDIQKAAIPLALKGHDILGAAKTGSGKTLAFLVPVLEKL--VQAQWTEYDGLGALIISP 142
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 143 TRELAVQIFEVLRKIGRNHVFSA-GLVIGGKSLKEEADRLGR-MNILVCTPGRMLQHLDQ 200
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT + V LA
Sbjct: 201 TAGFDVNNLQMLVLDEADRIMDMGFQSAVDALVEHLPKTR---QTMLFSATQSKRVSDLA 257
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + A + P +L+Q +IVTP +L L FI
Sbjct: 258 RLSLKDPEYVSAHEEA-------PTATPTNLQQSYIVTPLPEKLDTLWGFI-------RT 303
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+ +SKM+VF ++ + E + I+ LHG Q R E+ + F S K L
Sbjct: 304 NLKSKMIVFFSSGKQVRFVYESFKR-MQPGISLLHLHGRQKQVGRMEITRKFTSSKYACL 362
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P VDW+VQ P + Y+HRVGRTAR +G ++LFL PSE K +
Sbjct: 363 FATDVVARGVDFPAVDWVVQVDCPEDADTYIHRVGRTARYESKGRAVLFLDPSEEKGFLS 422
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I I ++ ++ E T+++ +S Q L
Sbjct: 423 RLEQKKIPITKVNVR-----------------------EGKKTSIKGELQSQCFQSADLK 459
Query: 834 TSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + ++VR Y KD +F F ++ L +A S L P V
Sbjct: 460 YLGQKAFITYVRSIYVQKDKD---VFKFSKMDLDGYAASLGLPGTPQV 504
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL ++ + + DG+ A+II P
Sbjct: 85 LTDIQKAAIPLALKGHDILGAAKTGSGKTLAFLVPVLEKL--VQAQWTEYDGLGALIISP 142
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 143 TRELAVQIFEVLRKIGRNHVFSA-GLVIGGKSLKEEADRLGR-MNILVCTPGRMLQHLDQ 200
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT
Sbjct: 201 TAGFDVNNLQMLVLDEADRIMDMGFQSAVDALVEHLPKTR---QTMLFSAT 248
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT + V L
Sbjct: 200 QTAGFDVNNLQMLVLDEADRIMDMGFQSAVDALVEHLPKTR---QTMLFSATQSKRVSDL 256
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + A + P +L+Q +IVTP +L L FI
Sbjct: 257 ARLSLKDPEYVSAHEEA-------PTATPTNLQQSYIVTPLPEKLDTLWGFI-------R 302
Query: 306 EDEESKMLVFMAT 318
+ +SKM+VF ++
Sbjct: 303 TNLKSKMIVFFSS 315
>gi|26346388|dbj|BAC36845.1| unnamed protein product [Mus musculus]
Length = 533
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 257/496 (51%), Gaps = 49/496 (9%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 249 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+ +CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGIQVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR+GH GS+L+FL+P E + L N++ ++E+ L+ +LL
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLP-------------K 406
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 407 LRAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLAR 453
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 454 GFALLRMPRMPELRGK 469
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 148/340 (43%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + K E L L + LD
Sbjct: 146 -------EDMFRRKAEGLDLASCVKSLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 265 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 297
>gi|417411641|gb|JAA52251.1| Putative atp-dependent rna helicase pitchoune, partial [Desmodus
rotundus]
Length = 563
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 242/469 (51%), Gaps = 48/469 (10%)
Query: 419 QQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 478
Q +I L DV + TGSGKTLA+ IPI++ L K+ ++ + A+II PTREL
Sbjct: 1 QSATIPLFLKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKRQ-VGAIIITPTREL 59
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH-TE 536
A+Q E+ + K F GG + AR ++ G +I+VATPGRL D + E
Sbjct: 60 AVQIHEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIVVATPGRLEDMFRRRAE 119
Query: 537 TLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
L + ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 120 GLDLAGCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVES 176
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
L L+NP++I + + S P L+ H++V + L F+
Sbjct: 177 LVRAGLRNPVRISVKEKG--ATASSSQKTPSRLQNHYMVCKADEKFNQLVRFL------- 227
Query: 653 NEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSG 712
++ K LVF +T +Y+ + L ++ + LHG M + +R ++F FR ++SG
Sbjct: 228 RNHKQEKHLVFFSTCACVEYYGKALEALV-RGVEIMCLHGKM-KHKRNKIFMGFRKLQSG 285
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLV 772
VL+CTDV ARG+D+P VDW++QY PSS++ +VHR GRTAR+GH GS+L+FL+P E V
Sbjct: 286 VLVCTDVMARGIDIPEVDWVLQYDPPSSASAFVHRCGRTARIGHGGSALVFLLPMEESYV 345
Query: 773 EELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKI 831
L N++ ++E+ L+ +LL + A A + FE V
Sbjct: 346 SFLAINQKCPLQEMVLQQPTADLLP-------------KLRAMALADRAVFEKGV----- 387
Query: 832 LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + S ++ YA + L IF K + A+ FAL P +
Sbjct: 388 ------RAFVSHIQAYAKHECSL--IFRLKDLDFAALARGFALLRMPRM 428
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 136/321 (42%), Gaps = 70/321 (21%)
Query: 10 QQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 69
Q +I L DV + TGSGKTLA+ IPI++ L K+ ++ + A+II PTREL
Sbjct: 1 QSATIPLFLKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKRQ-VGAIIITPTREL 59
Query: 70 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKHTET 128
A+Q E+ + K F GG + AR ++ G +I+VATPGRL E
Sbjct: 60 AVQIHEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIVVATPGRL-------ED 112
Query: 129 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTE 188
+ + E L L R LD
Sbjct: 113 MFRRRAEGLDLAGCVRSLDV---------------------------------------- 132
Query: 189 TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGM 248
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+ L
Sbjct: 133 ---------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVESLVRA 180
Query: 249 TLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 308
L+NP++I + + S P L+ H++V + L F+ +
Sbjct: 181 GLRNPVRISVKEKG--ATASSSQKTPSRLQNHYMVCKADEKFNQLVRFL-------RNHK 231
Query: 309 ESKMLVFMATQDMADYHTELL 329
+ K LVF +T +Y+ + L
Sbjct: 232 QEKHLVFFSTCACVEYYGKAL 252
>gi|114647685|ref|XP_001170267.1| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 8 [Pan
troglodytes]
gi|410214454|gb|JAA04446.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410214456|gb|JAA04447.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410214458|gb|JAA04448.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410252672|gb|JAA14303.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410252674|gb|JAA14304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410306148|gb|JAA31674.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410330307|gb|JAA34100.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410330309|gb|JAA34101.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
Length = 600
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 270/509 (53%), Gaps = 60/509 (11%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI---FTKLCKSFTWIVPSWLTG--- 503
I++ L K+ +K + A+II PTRELA+Q E+ FTK F+ I+ W+ G
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQIL--WIGGRNP 123
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQG 558
GE ++ K ++G +I+VATPGRL D + E L + ++ LVLDEADR+LD G
Sbjct: 124 GEDVEKFK---QQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG 180
Query: 559 YERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS 618
+E I LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++
Sbjct: 181 FEASINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK 237
Query: 619 LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 678
P L+ +++V + L F+ ++ K LVF +T +Y+ + L
Sbjct: 238 --TPSRLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALE 288
Query: 679 TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
VL + + +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY P
Sbjct: 289 -VLVKGVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPP 346
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSV 797
S+++ +VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+K + +LL
Sbjct: 347 SNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLP- 405
Query: 798 KMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
+++ A A + FE + K + S+V+ YA + +L I
Sbjct: 406 ------------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--I 440
Query: 858 FNFKQIHLGHFAKSFALRDAPSVISGIGK 886
F K + A+ FAL P + GK
Sbjct: 441 FRLKDLDFASLAQGFALLRMPKMPELRGK 469
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 146/330 (44%), Gaps = 80/330 (24%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEI---FTKLCKSFTWIVPSWLTG---GEKMKSEKARIRKGISILVATPGRL 119
TRELA+Q E+ FTK F+ I+ W+ G GE ++ K ++G +I+VATPGRL
Sbjct: 91 TRELAIQIDEVLSHFTKHFPEFSQIL--WIGGRNPGEDVEKFK---QQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVRSLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 -----RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|33416833|gb|AAH55481.1| Ddx10 protein, partial [Mus musculus]
Length = 623
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 260/495 (52%), Gaps = 56/495 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 11 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 65
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 66 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 122
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 123 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 181
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L++P + +H P +L+
Sbjct: 182 IENLPKKR---QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLE 231
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++I+ ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 232 QNYIICELHQKISVLFSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 283
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 284 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 343
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR +G +LL L+PSE + +V++L +++ ++EIK+ + +
Sbjct: 344 RAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKI--------------NPEK 389
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
L D +Q ES + Q + L A + + S++R + Y + +FN ++ +
Sbjct: 390 LID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFNVSKLPI 438
Query: 866 GHFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 439 TEYALSLGLAVAPRI 453
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 34 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 91
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 92 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 149
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 150 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 199
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 139 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 195
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 196 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 248
Query: 296 FI 297
F+
Sbjct: 249 FL 250
>gi|348554377|ref|XP_003463002.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Cavia porcellus]
Length = 596
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 260/502 (51%), Gaps = 62/502 (12%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPRVLDTLRE-LGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI---FTKLCKSFTWIVPSWLTG--- 503
I++ L K+ ++ + A+II PTRELA+Q E+ FTK F+ I+ W+ G
Sbjct: 67 ILEVLLRREEKLKKRQ-VGAIIITPTRELAIQIDEVLSHFTKRFPQFSQIL--WIGGRNP 123
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQG 558
GE ++ K R+G +I+VATPGRL D + E L + ++ LVLDEADR+LD G
Sbjct: 124 GEDVERFK---REGGNIIVATPGRLEDMFRRKAEGLDLASCVRALDVLVLDEADRLLDMG 180
Query: 559 YERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS 618
+E I LE+L KQ+ ++ L SAT T V+ L L+NP++I + ++T
Sbjct: 181 FEASINTILELLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK 237
Query: 619 LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 678
P L+ +++V + L F+ ++ K LVF +T +Y+ + L
Sbjct: 238 --TPSRLQNYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALQ 288
Query: 679 TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
++ + + +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V W++QY P
Sbjct: 289 ALV-KGVTVTCIHGKM-KHKRNKIFTDFRRLQSGILVCTDVMARGIDIPEVHWVLQYDPP 346
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
SS++ +VHR GRTAR+GH GS+L+FL+P E V N L++
Sbjct: 347 SSASAFVHRCGRTARIGHGGSALVFLLPMEEAYV--------------------NFLAIN 386
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
+ + + + A L ++ L + + K + S V+ YA + L IF
Sbjct: 387 QK-------ETRLPSDAVDLLPKLQAMALADRAVFEKGMKAFVSHVQAYAKHECSL--IF 437
Query: 859 NFKQIHLGHFAKSFALRDAPSV 880
K + A+ FAL P +
Sbjct: 438 RLKDLDFASLARGFALLRMPRM 459
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 148/330 (44%), Gaps = 80/330 (24%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ ++ + A+II P
Sbjct: 32 MTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEVLLRREEKLKKRQ-VGAIIITP 90
Query: 66 TRELALQTLEI---FTKLCKSFTWIVPSWLTG---GEKMKSEKARIRKGISILVATPGRL 119
TRELA+Q E+ FTK F+ I+ W+ G GE ++ K R+G +I+VATPGRL
Sbjct: 91 TRELAIQIDEVLSHFTKRFPQFSQIL--WIGGRNPGEDVERFK---REGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVRALDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE+L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILELLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLQNYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 -----RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|170039659|ref|XP_001847645.1| ATP-dependent RNA helicase DBP4 [Culex quinquefasciatus]
gi|167863269|gb|EDS26652.1| ATP-dependent RNA helicase DBP4 [Culex quinquefasciatus]
Length = 735
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 246/466 (52%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ SI P L G D+L ++TGSGKTLA+ IP+ +KL R +R DG+ A+II PT
Sbjct: 89 TAIQRQSILPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNR--WTRLDGLGALIITPT 146
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELALQ E K+ K+ + + GG+ +K EK+R+ + ++I++ TPGRLL H
Sbjct: 147 RELALQIFETVAKIGKNHDFTT-GLIIGGQNLKFEKSRLHQ-LNIIICTPGRLLQHMDTN 204
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
+ ++ LVLDEADR LD G++ + +E L + Q++L SAT T +V+ LA
Sbjct: 205 PLFDCTNLKVLVLDEADRCLDMGFQTAMNAIIENLPTTR---QTLLFSATQTKSVKDLAR 261
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
+ L +P+ I + + P L+Q+++ +L L SF+
Sbjct: 262 LNLTDPVYIAPHEK-------EEYTTPSRLQQNYVTVELSEKLTMLWSFL-------KSH 307
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
+ K++VF AT YH E+ L +I L+G M+Q +R +++ F S + L+
Sbjct: 308 SKQKIIVFFATCKQVRYHYEIFRK-LRPSILLLPLYGGMNQEKRNKIYAEFCSRSNVCLM 366
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEEL 775
TDVA+RGLD P V+W+VQ P +T Y+HR GRTAR+ G SLL L+P E + V +
Sbjct: 367 ATDVASRGLDFPKVNWVVQLDCPEDATQYIHRAGRTARLNTAGESLLVLLPQEEEGVVAM 426
Query: 776 QNR-RIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
R ++ I +I + DL +L V+ +S + Q L
Sbjct: 427 LGRTKVPINKINV--------------DLKQLFSPLVK---------IQSFLAQSPELKD 463
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+A + + ++V+ A KD + +F+ ++ L FAKS L P V
Sbjct: 464 TAKRAFVAYVKSVA-LMKD-KSVFDVSKLDLDAFAKSLGLLVTPRV 507
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ SI P L G D+L ++TGSGKTLA+ IP+ +KL R +R DG+ A+II PT
Sbjct: 89 TAIQRQSILPALQGKDILAAAKTGSGKTLAFLIPVFEKLYTNR--WTRLDGLGALIITPT 146
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELALQ E K+ K+ + + GG+ +K EK+R+ + ++I++ TPGRLL H
Sbjct: 147 RELALQIFETVAKIGKNHDFTT-GLIIGGQNLKFEKSRLHQ-LNIIICTPGRLLQHMDTN 204
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ ++ LVLDEADR LD G++ + +E L + Q++L SAT T
Sbjct: 205 PLFDCTNLKVLVLDEADRCLDMGFQTAMNAIIENLPTTR---QTLLFSATQT 253
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADR LD G++ + +E L + Q++L SAT T +V+ LA + L +P+ I
Sbjct: 215 LVLDEADRCLDMGFQTAMNAIIENLPTTR---QTLLFSATQTKSVKDLARLNLTDPVYIA 271
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ + P L+Q+++ +L L SF+ + K++VF A
Sbjct: 272 PHEK-------EEYTTPSRLQQNYVTVELSEKLTMLWSFL-------KSHSKQKIIVFFA 317
Query: 318 TQDMADYHTELL 329
T YH E+
Sbjct: 318 TCKQVRYHYEIF 329
>gi|332019858|gb|EGI60319.1| Putative ATP-dependent RNA helicase pitchoune [Acromyrmex
echinatior]
Length = 427
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 232/429 (54%), Gaps = 53/429 (12%)
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
+I+ PTRELA+QT + +L K + + L GG ++E ++ KGI+I+VATPGRL
Sbjct: 3 CIIMSPTRELAMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLEKGINIIVATPGRL 61
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH ++T + ++ L++DEADRILD GYE ++ + + IL K++ Q++L SAT T
Sbjct: 62 LDHLQNTPDFLYKNLQCLIIDEADRILDIGYEEELKQIINILPKRR---QTMLFSATQTQ 118
Query: 589 AVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
+ + + L+ PI + D ++ + L+Q ++ P + R + L +F+
Sbjct: 119 KIAMITTLALKKEPIYVGVDDDKEMATV-------EGLQQGYVTCPSEKRFLLLFTFL-- 169
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 170 -----KKNRQKKIMVFFSSCMSVKYHHELLNYI---DLPVMSIHGKQKQTKRTTTFYLFC 221
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIP 766
+ +G L+CTDVAARGLD+P VDWIVQ+ P +Y+HRVGRTAR G G +LL L P
Sbjct: 222 NASTGTLLCTDVAARGLDIPDVDWIVQFDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 281
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ R+ + E E +++AD +Q+ E +
Sbjct: 282 EELGFLRYLKIARVPVNE--------------YEFSWNKIAD---------IQLQLEKLI 318
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-----I 881
+ LH SA + + ++VR Y S+ L+H+F+ + + L AKSF P+V I
Sbjct: 319 SKNYFLHQSAKEAFKNYVRAYDSHH--LKHVFDIETLDLAKVAKSFGFVVPPAVDLKVGI 376
Query: 882 SGIGKPKNK 890
S +P+ +
Sbjct: 377 SKASRPRKR 385
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
+I+ PTRELA+QT + +L K + + L GG ++E ++ KGI+I+VATPGRL
Sbjct: 3 CIIMSPTRELAMQTFGVLKELMK-YHYHTYGLLMGGASRQTEAQKLEKGINIIVATPGRL 61
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LDH ++T + ++ L++DEADRILD GYE ++ + + IL K++ Q++L SAT T
Sbjct: 62 LDHLQNTPDFLYKNLQCLIIDEADRILDIGYEEELKQIINILPKRR---QTMLFSATQT 117
>gi|299890889|ref|NP_001177724.1| ATP-dependent RNA helicase DDX55 isoform 2 [Mus musculus]
Length = 596
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 255/495 (51%), Gaps = 51/495 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 16 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 75 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 134 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 194 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 249 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 301 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR+GH GS+L+FL+P E + L I +E+ L+ +LL +
Sbjct: 360 ARIGHGGSALVFLLPMEEAYINFLA---INQKEMSLQRNTIDLLP-------------KL 403
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 404 RAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLARG 450
Query: 872 FALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 451 FALLRMPRMPELRGK 465
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 27 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L
Sbjct: 146 EDMFRR-------KAEGLDL---------------------------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 265 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 297
>gi|307182249|gb|EFN69580.1| ATP-dependent RNA helicase DDX55 [Camponotus floridanus]
Length = 589
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 256/481 (53%), Gaps = 55/481 (11%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ I +L G DV + TGSGKTLA+ +P+++ LQ+ RP + + A+II P
Sbjct: 29 MTPVQAACIPLLLSGKDVAAEAVTGSGKTLAFLVPLLEILQK-RPDKWKTIEVGAIIISP 87
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL---LDH 531
TRELA Q EI K + + L GG +K + ++KG++I+VATPGRL L +
Sbjct: 88 TRELATQISEILEKFLEKLPSLKQVLLVGGVTLKEDAENLKKGVNIIVATPGRLEDILSN 147
Query: 532 CKHTE-TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
C L +E LVLDEADR+LD G+ + L L + + ++ L SAT T +
Sbjct: 148 CSSINLNLCIKSLEFLVLDEADRLLDLGFSATLDSILSYLPRLR---RTGLFSATQTKEL 204
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI--LGK 648
Q+L L+NP + + ++I P +L + + P+ +L + FI +G
Sbjct: 205 QQLIRAGLRNPALVVVKEKSNIST-------PVNLNNSYTIVQPEHKLSIMIDFIRSIGF 257
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++K ++F++T DY + ++ +L +I LHG M +S+R ++F FR
Sbjct: 258 --------KTKYMIFLSTCACVDYFSRVIQVLL-PSINVLALHGKM-KSKRYKIFDEFRQ 307
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
++G+LICTDV ARG+D+ ++W++QY PS+++ +VHR GRTAR+G+EG++LLFL+ +E
Sbjct: 308 AENGILICTDVMARGIDISEINWVLQYDPPSTASSFVHRCGRTARIGNEGNALLFLLETE 367
Query: 769 VKLVEEL-QNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
V+ + +N+++ +++IK K NV LQ L
Sbjct: 368 DAYVDFVKRNQKVELQQIKTKP--------------------NVNIIEECLQCMRH---L 404
Query: 828 QQK--ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
QQK ++ A + + S+++ Y+ + L I K I +G A F L P + G
Sbjct: 405 QQKDRLMFDKANRAFVSYIQSYSKHECSL--ILRLKDIDMGKLAMGFGLLKMPKMPELKG 462
Query: 886 K 886
K
Sbjct: 463 K 463
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 100/177 (56%), Gaps = 8/177 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ I +L G DV + TGSGKTLA+ +P+++ LQ+ RP + + A+II P
Sbjct: 29 MTPVQAACIPLLLSGKDVAAEAVTGSGKTLAFLVPLLEILQK-RPDKWKTIEVGAIIISP 87
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL---LDH 122
TRELA Q EI K + + L GG +K + ++KG++I+VATPGRL L +
Sbjct: 88 TRELATQISEILEKFLEKLPSLKQVLLVGGVTLKEDAENLKKGVNIIVATPGRLEDILSN 147
Query: 123 CKHTE-TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
C L +E LVLDEADR+LD G+ + L L + + ++ L SAT T
Sbjct: 148 CSSINLNLCIKSLEFLVLDEADRLLDLGFSATLDSILSYLPRLR---RTGLFSATQT 201
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 20/137 (14%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
+E LVLDEADR+LD G+ + L L + + ++ L SAT T +Q+L L+NP
Sbjct: 160 LEFLVLDEADRLLDLGFSATLDSILSYLPRLR---RTGLFSATQTKELQQLIRAGLRNPA 216
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI--LGKCQNVNEDEESKM 312
+ + ++I P +L + + P+ +L + FI +G ++K
Sbjct: 217 LVVVKEKSNIST-------PVNLNNSYTIVQPEHKLSIMIDFIRSIG--------FKTKY 261
Query: 313 LVFMATQDMADYHTELL 329
++F++T DY + ++
Sbjct: 262 MIFLSTCACVDYFSRVI 278
>gi|440476300|gb|ELQ44912.1| ATP-dependent RNA helicase HAS1 [Magnaporthe oryzae Y34]
Length = 864
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 263/498 (52%), Gaps = 60/498 (12%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 128 EEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGT 185
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGR
Sbjct: 186 GVIVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGR 244
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT T
Sbjct: 245 LLDHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQT 300
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ ++ + + + L+Q ++V R + L SF+
Sbjct: 301 TKVEDLARVSLRPGPLYLNVDEEKEYSTV-------EGLEQGYVVCEADKRFILLFSFL- 352
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ ++ K++VF ++ + Y+ ELL+ + + LHG Q +RT F F
Sbjct: 353 ------QKMKKKKIIVFFSSCNSVKYYAELLNYI---DCQVLDLHGKQKQQKRTNTFFEF 403
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ G LICTDVAARGL + P DY+HRVGRTAR +G SL+FL+
Sbjct: 404 CNADRGTLICTDVAARGL---------DFDPPDDPRDYIHRVGRTARGTNKKGRSLMFLL 454
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV + L+ R+ + +E D + NV Q E
Sbjct: 455 PSEVGFLTYLKQARVPV----------------VEFDFPTKSIKNV-------QSQLEKL 491
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + L++SA G+ S++ YAS+S LR +F+ ++ L AKSF P V +G
Sbjct: 492 IGKNYYLNSSAKDGFRSYLHAYASHS--LRSVFDINKLDLAKVAKSFGFATPPRVDIQLG 549
Query: 886 KPKNKEELKNKKMAINKE 903
+K++ + A +
Sbjct: 550 ASMSKDKKAGGRRAYGSQ 567
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 32/244 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 130 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGTGV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 188 IVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT
Sbjct: 247 DHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQTTK 302
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR--ILDQGYERDIAEFLEIL 222
L P + E ++S VE L V+ EAD+ IL + FL+ +
Sbjct: 303 VEDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEADKRFIL-------LFSFLQKM 355
Query: 223 KKQK 226
KK+K
Sbjct: 356 KKKK 359
>gi|407044800|gb|EKE42830.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 694
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 146/396 (36%), Positives = 228/396 (57%), Gaps = 27/396 (6%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++FP I + LN+ IT +T +Q+ +I L G D++ ++TGSGKTLA+ IP+I
Sbjct: 91 FDQFP-ISKATIQLLNKNRFIT-MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLI 148
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSE 510
+ + R + + DG+ A+I+ PTRELA Q ++F + + FT + +TGG+ K E
Sbjct: 149 EFM--YRSRWTELDGLCAIILSPTRELAQQIFDVFASIAGERFT---AALITGGKDTK-E 202
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+A++ + +++L+ TPGRLL H +T + + L+LDEADRILD G+++D+ LE L
Sbjct: 203 EAKVIRLMNVLICTPGRLLYHLDNTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHL 262
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
KQ+ Q++L SAT T +VQ L ++L++P I + D H T P++L Q ++
Sbjct: 263 PKQR---QTMLFSATQTKSVQDLIRLSLRHPEYI-SVDEKAQHAT------PETLNQTYM 312
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ ++ L SFI SKM+VF T + E L + L
Sbjct: 313 LLGDGDKINVLFSFIRTHTN-------SKMIVFFQTTKEVRFFFETFKK-LRVGAVLYLL 364
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
+G SQ+ R E TF K G+L CTD+A+RGLD+ VDWIVQY P + Y+HRVGR
Sbjct: 365 YGRQSQNSRNEQLSTFTKEKRGILFCTDIASRGLDIQGVDWIVQYDCPEDTAQYIHRVGR 424
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
TAR+ H G +LL L +E VE+L+ ++ + ++
Sbjct: 425 TARINHNGQALLLLTHNEEAFVEQLEKAKVPLNRVE 460
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 10/176 (5%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ + R + + DG+ A+I+ P
Sbjct: 112 MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIEFM--YRSRWTELDGLCAIILSP 169
Query: 66 TRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
TRELA Q ++F + + FT + +TGG+ K E+A++ + +++L+ TPGRLL H
Sbjct: 170 TRELAQQIFDVFASIAGERFT---AALITGGKDTK-EEAKVIRLMNVLICTPGRLLYHLD 225
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+T + + L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +
Sbjct: 226 NTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKS 278
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +VQ L ++L++P I
Sbjct: 238 LILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKSVQDLIRLSLRHPEYI- 293
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ D H T P++L Q +++ ++ L SFI SKM+VF
Sbjct: 294 SVDEKAQHAT------PETLNQTYMLLGDGDKINVLFSFIRTHTN-------SKMIVFFQ 340
Query: 318 T 318
T
Sbjct: 341 T 341
>gi|148687631|gb|EDL19578.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_b [Mus
musculus]
Length = 602
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 255/495 (51%), Gaps = 51/495 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 22 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 80
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 81 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 139
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 140 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 199
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 200 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 254
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 255 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 306
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 307 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 365
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR+GH GS+L+FL+P E + L I +E+ L+ +LL +
Sbjct: 366 ARIGHGGSALVFLLPMEEAYINFLA---INQKEMSLQRNTIDLLP-------------KL 409
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 410 RAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLARG 456
Query: 872 FALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 457 FALLRMPRMPELRGK 471
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 33 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 91
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 92 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 151
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + K E L L
Sbjct: 152 -------EDMFRRKAEGLDL---------------------------------------- 164
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 165 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 212
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 213 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 270
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 271 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 303
>gi|351711157|gb|EHB14076.1| Putative ATP-dependent RNA helicase DDX10 [Heterocephalus glaber]
Length = 692
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 260/495 (52%), Gaps = 56/495 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP + K +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP-----LSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSMDGLGVLIISPTRELAYQTFEVLRKVGKNHDF-SAGLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E + K++ Q++L SAT T +V+ LA ++L+NP + +H P +L+
Sbjct: 240 IENIPKKR---QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++IV + +L L SF+ + K +VF ++ Y + L I+
Sbjct: 290 QNYIVCELQQKLSVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R E++ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 ILALHGRQQQMRRMEIYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR +G +LL L+PSE + +V++L +++ +++IK+ + +
Sbjct: 402 RAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKQIKI--------------NPEK 447
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
L D +Q ES + Q + L A + + S++R + Y + +F+ ++ +
Sbjct: 448 LID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFDVSKLPI 496
Query: 866 GHFAKSFALRDAPSV 880
+A S L AP V
Sbjct: 497 TEYALSLGLAVAPRV 511
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSMDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDF-SAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
T + ++ LVLDEADRILD G+ + +E + K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENIPKKR---QTLLFSATQTKSV 260
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E + K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENIPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L+NP + +H P +L+Q++IV + +L L S
Sbjct: 254 ATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKLSVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|401625093|gb|EJS43118.1| hca4p [Saccharomyces arboricola H-6]
Length = 770
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 255/506 (50%), Gaps = 45/506 (8%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ IP+I
Sbjct: 43 FKDLPLSDPTLK-GLRESSFI-KLTEIQTDSIPVSLKGHDVLAAARTGSGKTLAFLIPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI K I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISK-INILIGTPGRILQHLDQAVGLSTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D D P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDLMDASGNKDP-TTPETLQQSYIE 272
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P +L L SFI + SKM+VF+++ + E + I+ LH
Sbjct: 273 VPLADKLDILFSFIKSHLK-------SKMIVFLSSSKQVHFVYETFRK-MQPGISLMHLH 324
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVGR
Sbjct: 325 GRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRC 384
Query: 752 ARVGHEGSSLLFLIPSEVKL-VEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR G +G SL+ L P E ++ ++ LQ RRI + S+L
Sbjct: 385 ARYGKKGKSLIMLTPQEQEMFLKRLQGRRI---------------------EPSKLNIKQ 423
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ + Q+ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 424 SKKKSIKPQL--QSLLFKDPELKYLGQKAFISYVR--SIYVQKDKEVFKFDELPTEEFAY 479
Query: 871 SFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 480 SLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ IP+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQTDSIPVSLKGHDVLAAARTGSGKTLAFLIPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI K I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISK-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLSTSNLQMLVLDEADRCLDMGFKKTLDAIVSNL---SPSRQTLLFSAT 227
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LSTSNLQMLVLDEADRCLDMGFKKTLDAIVSNL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + + D D D P++L+Q +I P +L L SFI +
Sbjct: 240 LTDYKTVGTHDLMDASGNKDP-TTPETLQQSYIEVPLADKLDILFSFIKSHLK------- 291
Query: 310 SKMLVFMAT 318
SKM+VF+++
Sbjct: 292 SKMIVFLSS 300
>gi|189491668|ref|NP_084212.2| probable ATP-dependent RNA helicase DDX10 [Mus musculus]
gi|76364168|sp|Q80Y44.2|DDX10_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
Length = 875
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 256/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q++I+
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLFSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE + +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEQGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + +FN ++ + +A S L
Sbjct: 451 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFNVSKLPITEYALSLGLA 506
Query: 876 DAPSV 880
AP +
Sbjct: 507 VAPRI 511
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|393216315|gb|EJD01805.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 802
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 251/496 (50%), Gaps = 52/496 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
++T +Q SI L G DVL ++TGSGKTLA+ +P+++ L R K +DG+ A+
Sbjct: 81 GFVKMTEIQAKSIPLSLKGKDVLGAARTGSGKTLAFLVPVLEIL--YRKKWGPQDGLGAL 138
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ + T+ + GG+ +K EK R+ + ++ILVATPGRLL
Sbjct: 139 IISPTRELAVQIFEVLRSIGGYHTFSA-GLVIGGKNLKDEKERLNR-MNILVATPGRLLQ 196
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRILD G+ R + LE L + + Q++L SAT T +V
Sbjct: 197 HMDQTFGFDCDNLQMLVLDEADRILDMGFSRTVNALLEHLPRSR---QTLLFSATQTDSV 253
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L++ + + + H T P L+QH++V +L L SFI Q
Sbjct: 254 KDLARLSLKDSVFVSVKEEGS-HAAT-----PKLLEQHYVVCELDRKLDILWSFIKSHLQ 307
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK+LVF A+ + E L LHG Q+ R F S+K
Sbjct: 308 -------SKVLVFFASGKQVRFVFETFCK-LHPGSPLMHLHGKQKQATRLGTCAKFTSMK 359
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
VL TD+AARGLD P VDW++Q AP + Y+HRVGRTAR G LL L PSE +
Sbjct: 360 HAVLFATDLAARGLDFPSVDWVLQVDAPEDAETYIHRVGRTARYESRGKGLLLLCPSEEE 419
Query: 771 -LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++E L+ + I +E+IK+K + +++ ++ Q
Sbjct: 420 GMLEALKKKEIVVEKIKIK-----------------------ASKTQSIEKHLQNLAFQD 456
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKN 889
+ + + S +R + Y + + IF ++ FA S L AP + K +
Sbjct: 457 PEIKYLGQRAFVSHMR--SVYQQKDKSIFKIDELPAERFAASLGLPGAPKI-----KFLS 509
Query: 890 KEELKNKKMAINKEKS 905
KE +K +K A EKS
Sbjct: 510 KEAVKKRKNASYLEKS 525
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
++T +Q SI L G DVL ++TGSGKTLA+ +P+++ L R K +DG+ A+
Sbjct: 81 GFVKMTEIQAKSIPLSLKGKDVLGAARTGSGKTLAFLVPVLEIL--YRKKWGPQDGLGAL 138
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ + T+ + GG+ +K EK R+ + ++ILVATPGRLL
Sbjct: 139 IISPTRELAVQIFEVLRSIGGYHTFSA-GLVIGGKNLKDEKERLNR-MNILVATPGRLLQ 196
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T ++ LVLDEADRILD G+ R + LE L + + Q++L SAT T
Sbjct: 197 HMDQTFGFDCDNLQMLVLDEADRILDMGFSRTVNALLEHLPRSR---QTLLFSATQT 250
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++ LVLDEADRILD G+ R + LE L + + Q++L S
Sbjct: 190 TPGRLLQHMDQTFGFDCDNLQMLVLDEADRILDMGFSRTVNALLEHLPRSR---QTLLFS 246
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++ + + + H T P L+QH++V +L L S
Sbjct: 247 ATQTDSVKDLARLSLKDSVFVSVKEEGS-HAAT-----PKLLEQHYVVCELDRKLDILWS 300
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q SK+LVF A+
Sbjct: 301 FIKSHLQ-------SKVLVFFAS 316
>gi|28175486|gb|AAH43052.1| Ddx55 protein, partial [Mus musculus]
Length = 602
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 255/495 (51%), Gaps = 51/495 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+HP + L E + +T VQ +I + DV + TGSGKTLA+ IPI++ L
Sbjct: 22 LHPRVLGALRE-LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR 80
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK- 516
K+ +K+ + A++I PTRELA+Q E+ + K F GG + R ++
Sbjct: 81 EEKL-KKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQH 139
Query: 517 GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 140 GGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLP 199
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ L L+NP++I + ++T P L+ H+++
Sbjct: 200 KQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMI 254
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ L F+ + ++ K LVF +T +Y+ + L +L + + +H
Sbjct: 255 CKADEKFNQLVHFLRSR-------QQEKHLVFFSTCACVEYYGKALEALL-KKVKILCIH 306
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRT
Sbjct: 307 GKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRT 365
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR+GH GS+L+FL+P E + L I +E+ L+ +LL +
Sbjct: 366 ARIGHGGSALVFLLPMEEAYINFLA---INQKEMSLQRNTIDLLP-------------KL 409
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
A A + FE + K + S+V+ YA + L IF K + A+
Sbjct: 410 RAMALADRAVFEKGM-----------KAFVSFVQAYAKHECSL--IFRLKDLDFAGLARG 456
Query: 872 FALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 457 FALLRMPRMPELRGK 471
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 150/340 (44%), Gaps = 71/340 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K+ + A
Sbjct: 33 LGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKNQVGA 91
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
++I PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 92 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 151
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L
Sbjct: 152 EDMFRR-------KAEGLDL---------------------------------------- 164
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 165 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 212
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ H+++ + L F+
Sbjct: 213 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENHYMICKADEKFNQLVHFLRS 270
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL-STKKKIKKL 338
+ ++ K LVF +T +Y+ + L + KK+K L
Sbjct: 271 R-------QQEKHLVFFSTCACVEYYGKALEALLKKVKIL 303
>gi|444723572|gb|ELW64223.1| putative ATP-dependent RNA helicase DDX10 [Tupaia chinensis]
Length = 663
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 256/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 77 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 133
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 134 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKIGKNHDFSA-GLIIGGKDLKHEAERI-N 191
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV T GRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 192 NINILVCTLGRLLQHMDETVCFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 249
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L+NP + +H P +L+Q++IV +
Sbjct: 250 -QTLLFSATQTKSVKDLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 301
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 302 KISVLYSFLKSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 353
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 354 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 413
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K +V++L +++ ++EIK+ + +L D
Sbjct: 414 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 452
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + IF+ ++ + +A S L
Sbjct: 453 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEIFDVNKLPIPEYALSLGLA 508
Query: 876 DAPSV 880
AP +
Sbjct: 509 VAPRI 513
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 94 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 151
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV T GRLL H
Sbjct: 152 TRELAYQTFEVLRKIGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTLGRLLQHMDE 209
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 210 TVCFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSV 262
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 184 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQ 243
C H L+ LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+
Sbjct: 212 CFHATNLQM-----LVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSVK 263
Query: 244 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
LA ++L+NP + +H P +L+Q++IV + ++ L SF+
Sbjct: 264 DLARLSLKNP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYSFL 310
>gi|156384956|ref|XP_001633398.1| predicted protein [Nematostella vectensis]
gi|156220467|gb|EDO41335.1| predicted protein [Nematostella vectensis]
Length = 583
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 249/477 (52%), Gaps = 46/477 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN + +T VQ +I + DV V + TGSGKTLA+ IPII+ + K+ +K I A
Sbjct: 23 MNFSTMTPVQAAAIPLFMSNKDVAVEAVTGSGKTLAFVIPIIEIILRREDKL-KKHEIGA 81
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE-KARIRKGISILVATPGRL 528
+II PTRELA Q E+ + L + I L GG ++ KA +G +I++ TPGRL
Sbjct: 82 LIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNADLKAFKYEGANIIIGTPGRL 141
Query: 529 LDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
D + +E LVLDEADR+LD G+E I L L KQ+ ++ L S
Sbjct: 142 EDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQR---RTGLFS 198
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T V+ L L+NP+++ + + T + P +L+ +++ + L +
Sbjct: 199 ATQTDEVEALVRAGLRNPVRVTVREK--LTKTKNVQRTPSTLQNFYLICRSHEKFSQLVA 256
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ + ++ K +VF +T +Y ++ L+ L N+ LHG M +S R ++F
Sbjct: 257 FLKAR-------KDKKNMVFFSTCACVNYFSKALTKFL-PNVHIMALHGKM-KSNRHKIF 307
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
+FR ++SG+L+CTDV ARG+D+P V+W++QY PSS+ +VHR GRTAR+G+EG++++F
Sbjct: 308 DSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARIGNEGNAVVF 367
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+P+E D + +S+ + L L + A + +
Sbjct: 368 LLPTE--------------------DSYVDFISINQKVPLQALEP---DKDAPNITAKLK 404
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + L K + S+V+ Y + L IF FK++ LG A+ F L PS+
Sbjct: 405 KLATKDRDLFEKGTKAFVSFVQAYKKHECSL--IFRFKELDLGLLAEGFGLLRLPSM 459
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 100/184 (54%), Gaps = 10/184 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN + +T VQ +I + DV V + TGSGKTLA+ IPII+ + K+ +K I A
Sbjct: 23 MNFSTMTPVQAAAIPLFMSNKDVAVEAVTGSGKTLAFVIPIIEIILRREDKL-KKHEIGA 81
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE-KARIRKGISILVATPGRL 119
+II PTRELA Q E+ + L + I L GG ++ KA +G +I++ TPGRL
Sbjct: 82 LIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNADLKAFKYEGANIIIGTPGRL 141
Query: 120 LDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
D + +E LVLDEADR+LD G+E I L L KQ+ ++ L S
Sbjct: 142 EDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQR---RTGLFS 198
Query: 175 ATLT 178
AT T
Sbjct: 199 ATQT 202
>gi|27371129|gb|AAH23303.1| Ddx10 protein, partial [Mus musculus]
Length = 681
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 260/495 (52%), Gaps = 56/495 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L++P + +H P +L+
Sbjct: 240 IENLPKKR---QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++I+ ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 290 QNYIICELHQKISVLFSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR +G +LL L+PSE + +V++L +++ ++EIK+ + +
Sbjct: 402 RAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKI--------------NPEK 447
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
L D +Q ES + Q + L A + + S++R + Y + +FN ++ +
Sbjct: 448 LID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFNVSKLPI 496
Query: 866 GHFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 497 TEYALSLGLAVAPRI 511
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|398392601|ref|XP_003849760.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339469637|gb|EGP84736.1| hypothetical protein MYCGRDRAFT_101180 [Zymoseptoria tritici
IPO323]
Length = 811
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 250/489 (51%), Gaps = 49/489 (10%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
+ +T +Q +I L G D+L ++TGSGKTLA+ IP+++ L + + G+ A+I
Sbjct: 68 FSTLTDIQAKAIPLALKGKDILGAAKTGSGKTLAFLIPVLENLYRAQC-VGGDAGLGAMI 126
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
I PTRELA+Q E+ K+ + GG+ ++ E+ + + ++I+V TPGRLL H
Sbjct: 127 ITPTRELAIQIFEVLRKVGGKGHLFAAGLVIGGKSLREEQDALAR-MNIVVGTPGRLLQH 185
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
T + LVLDEADRILD G++RD+ ++ L K++ Q++L SAT T V
Sbjct: 186 LSQTAMFNVDNLRMLVLDEADRILDMGFQRDVDAIVDYLPKER---QTMLFSATQTKKVG 242
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA ++L P + +H S P +L+Q++++TP + +L L SFI
Sbjct: 243 DLARLSLNEP------EYVSVHEAAQS-ATPKTLQQNYVITPLQDKLDTLWSFI------ 289
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
++SK+L+F+++ + E + I LHG Q+ R ++ + F + K+
Sbjct: 290 -QSAKKSKLLIFLSSGKQVRFVYESFRH-MQPGIPLLHLHGRQKQTARLDITQKFSAAKN 347
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK- 770
L TDV ARGLD P VDW+VQ P + Y+HRVGRTAR +G ++LFL PSE +
Sbjct: 348 SCLFATDVVARGLDFPAVDWVVQVDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEEG 407
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
++ L+ +++ IE I +K Q T+++ +S +
Sbjct: 408 MLGRLEQKKVPIERINVKAKKQ-----------------------TSIKNQLQSMCFKDP 444
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNK 890
L K + S+VR KD + IF + L FA S L AP + ++
Sbjct: 445 QLKYLGQKCFASYVRSL-HIQKD-KEIFKLDKYPLEEFAASLGLPGAPRIKF---LKADQ 499
Query: 891 EELKNKKMA 899
EE+K KK A
Sbjct: 500 EEVKRKKNA 508
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
+ +T +Q +I L G D+L ++TGSGKTLA+ IP+++ L + + G+ A+I
Sbjct: 68 FSTLTDIQAKAIPLALKGKDILGAAKTGSGKTLAFLIPVLENLYRAQC-VGGDAGLGAMI 126
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ K+ + GG+ ++ E+ + + ++I+V TPGRLL H
Sbjct: 127 ITPTRELAIQIFEVLRKVGGKGHLFAAGLVIGGKSLREEQDALAR-MNIVVGTPGRLLQH 185
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + LVLDEADRILD G++RD+ ++ L K++ Q++L SAT T
Sbjct: 186 LSQTAMFNVDNLRMLVLDEADRILDMGFQRDVDAIVDYLPKER---QTMLFSATQT 238
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T F+ + LVLDEADRILD G++RD+ ++ L K++ Q++L S
Sbjct: 178 TPGRLLQHLSQTAMFNVDNLRMLVLDEADRILDMGFQRDVDAIVDYLPKER---QTMLFS 234
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L P + +H S P +L+Q++++TP + +L L S
Sbjct: 235 ATQTKKVGDLARLSLNEP------EYVSVHEAAQS-ATPKTLQQNYVITPLQDKLDTLWS 287
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI ++SK+L+F+++
Sbjct: 288 FI-------QSAKKSKLLIFLSS 303
>gi|409047652|gb|EKM57131.1| hypothetical protein PHACADRAFT_119388 [Phanerochaete carnosa
HHB-10118-sp]
Length = 780
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 255/503 (50%), Gaps = 53/503 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
I K+ L + + +T +Q S+ L G DVL ++TGSGKTLA+ P+++ L
Sbjct: 59 ISDLTKRGLKKA-SFVDMTDIQVKSLPASLRGKDVLGAARTGSGKTLAFLTPVLEVL--Y 115
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
R K +DG+ A+II PTRELA+Q E+ + T+ + GG+ +K E+ R+ +
Sbjct: 116 RRKWGPQDGLGALIISPTRELAVQIFEVLRSIGGYHTFSA-GLIIGGKNLKDERDRLTR- 173
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
++ILVATPGRLL H T + ++ LVLDEADRILD G+ + + L L K +
Sbjct: 174 MNILVATPGRLLQHMDQTVGFECDNLQMLVLDEADRILDMGFHKTLTALLSHLPKSR--- 230
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLR 637
Q++L SAT T +V LA ++L++P+ I + S V+P SL+QH +V +
Sbjct: 231 QTLLFSATQTKSVTDLARLSLKDPVYISTQEEEA------SGVMPKSLEQHHVVVDLDKK 284
Query: 638 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQS 697
L L SFI Q +K LVFM+ + E + I +LHG Q
Sbjct: 285 LDVLWSFIKTHLQ-------TKTLVFMSCCKQVRFVFETFCK-MHPGIPLLQLHGKQKQM 336
Query: 698 ERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
R F+ F S++ VL+ TD+AARGLD P VDW++Q AP + Y+HRVGRTAR
Sbjct: 337 SRLATFQRFTSIRHAVLLATDIAARGLDFPAVDWVLQVDAPEDAETYIHRVGRTARYESA 396
Query: 758 GSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
G +LLFL PSE + + L + I +IK+K +
Sbjct: 397 GKALLFLAPSEEEGMKAALAKKGIEAAKIKIK-----------------------ASKTH 433
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
++Q F+ + + + + S++R KD + IF +++ + +A++ L
Sbjct: 434 SVQNQFQKLCFEDPDIKYLGQRAFVSYLR-SVHIMKD-KSIFKLEELPVQRYAEALGLPG 491
Query: 877 APSVISGIGKPKNKEELKNKKMA 899
AP + K NKE K KK A
Sbjct: 492 APKI-----KFLNKEIAKAKKNA 509
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ +T +Q S+ L G DVL ++TGSGKTLA+ P+++ L R K +DG+ A+
Sbjct: 71 SFVDMTDIQVKSLPASLRGKDVLGAARTGSGKTLAFLTPVLEVL--YRRKWGPQDGLGAL 128
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ + T+ + GG+ +K E+ R+ + ++ILVATPGRLL
Sbjct: 129 IISPTRELAVQIFEVLRSIGGYHTFSA-GLIIGGKNLKDERDRLTR-MNILVATPGRLLQ 186
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T + ++ LVLDEADRILD G+ + + L L K + Q++L SAT T
Sbjct: 187 HMDQTVGFECDNLQMLVLDEADRILDMGFHKTLTALLSHLPKSR---QTLLFSATQT 240
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 18/142 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G+ + + L L K + Q++L S
Sbjct: 180 TPGRLLQHMDQTVGFECDNLQMLVLDEADRILDMGFHKTLTALLSHLPKSR---QTLLFS 236
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L++P+ I + S V+P SL+QH +V +L L S
Sbjct: 237 ATQTKSVTDLARLSLKDPVYISTQEE------EASGVMPKSLEQHHVVVDLDKKLDVLWS 290
Query: 296 FILGKCQNVNEDEESKMLVFMA 317
FI Q +K LVFM+
Sbjct: 291 FIKTHLQ-------TKTLVFMS 305
>gi|219120803|ref|XP_002185633.1| glycine decarboxylase T-protein, aminomethyl transferase, GDCT,
GCST, GCVT [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582482|gb|ACI65103.1| glycine decarboxylase T-protein, aminomethyl transferase, GDCT,
GCST, GCVT [Phaeodactylum tricornutum CCAP 1055/1]
Length = 476
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 245/498 (49%), Gaps = 44/498 (8%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +T +Q I L G D+L ++TGSGKTLA+ IP+++ L R + S DG AV+
Sbjct: 21 FTTMTDIQNACIPHALAGRDILGAARTGSGKTLAFLIPVLECL--YRNRFSPVDGPGAVV 78
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTRELA+Q ++ K + V L GG++ E+ +I++ATPGRLL H
Sbjct: 79 LSPTRELAVQIFQVLRMAGKYHAFSV-GLLIGGKRDFFEEQNQVGSTNIIIATPGRLLQH 137
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
+ T S + LVLDEADR+LD G+ + LE L + Q Q++L SAT T V
Sbjct: 138 LEQTPNFDTSDLRMLVLDEADRVLDMGFRDQLVRILEYLPTE--QRQTLLFSATQTNDVS 195
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA M+LQ P + D + PD+L+Q ++V P + +L A+ SF+ +N
Sbjct: 196 HLATMSLQKPEYLGVHDK-------EKTSTPDALQQSYVVVPLEHKLDAVYSFVKSHLKN 248
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
K ++F AT Y EL + L I LHG + Q++RTE++ +
Sbjct: 249 -------KSIIFFATCSQVRYAWELFCS-LRPGIPVMALHGKLVQTKRTEIYFDYLQRPH 300
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK- 770
VL TD+AARGLD VDW+VQ AP Y+HR GRTAR G SLL L P E K
Sbjct: 301 AVLFATDIAARGLDFKDVDWVVQADAPEDKAMYIHRAGRTARYRAGGKSLLMLTPPEEKN 360
Query: 771 -LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
+E +Q + + ++ LK N T + S V
Sbjct: 361 GFIELVQGK--KAAKVPLKKLSIN------------------PTKTVVVTERAASLVASN 400
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKN 889
L+ A K Y S++R + + R IF+ K + L FAKS L P++ K+
Sbjct: 401 PNLNRLAKKAYESYIR--SIFLMPNREIFDVKDMSLDGFAKSLGLASTPNLRFLKNSAKD 458
Query: 890 KEELKNKKMAINKEKSFK 907
+EEL++ K K + K
Sbjct: 459 REELRSVKNVNRKLQKLK 476
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 144/329 (43%), Gaps = 80/329 (24%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T +T +Q I L G D+L ++TGSGKTLA+ IP+++ L R + S DG AV+
Sbjct: 21 FTTMTDIQNACIPHALAGRDILGAARTGSGKTLAFLIPVLECL--YRNRFSPVDGPGAVV 78
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
+ PTRELA+Q ++ K + V L GG++ E+ +I++ATPGRLL H
Sbjct: 79 LSPTRELAVQIFQVLRMAGKYHAFSV-GLLIGGKRDFFEEQNQVGSTNIIIATPGRLLQH 137
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
+ Q P F +
Sbjct: 138 LE---------------------------------------QTPNFDT------------ 146
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
S + LVLDEADR+LD G+ + LE L + Q Q++L SAT T V
Sbjct: 147 ----------SDLRMLVLDEADRVLDMGFRDQLVRILEYLPTE--QRQTLLFSATQTNDV 194
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
LA M+LQ P + D + PD+L+Q ++V P + +L A+ SF+ +
Sbjct: 195 SHLATMSLQKPEYLGVHDK-------EKTSTPDALQQSYVVVPLEHKLDAVYSFVKSHLK 247
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLST 331
N K ++F AT Y EL +
Sbjct: 248 N-------KSIIFFATCSQVRYAWELFCS 269
>gi|378754348|gb|EHY64382.1| hypothetical protein NERG_02553 [Nematocida sp. 1 ERTm2]
Length = 445
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 251/489 (51%), Gaps = 65/489 (13%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL- 454
P I ++K L E M IT++T +QQ +I ++G D+L + TGSGKTL++ IP +KL
Sbjct: 10 PFISRHIRKRLKE-MEITKLTEIQQKAIPYAMEGRDLLGIANTGSGKTLSFLIPAAEKLI 68
Query: 455 --QEMR-PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+E++ PK+ ++I PTRELA+QT + +L I GG K E
Sbjct: 69 LEKEVKTPKV--------LVISPTRELAMQTSRVAQRLFADHPDIRTVLFVGGTKKADEN 120
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+++KG +ILV TPGRLLDH K +LK K+E VLDE+DRILD G+E+D+ E L L
Sbjct: 121 EQLKKGCAILVCTPGRLLDHLKSGLSLK--KIEIAVLDESDRILDIGFEKDMCEILTYLP 178
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
K++ Q+++ SAT T V + ++ + + D + LKQ F+V
Sbjct: 179 KKR---QTLMFSATNTDNVLCRSWLSKRY---------KKVQVKIDDKITAAGLKQSFVV 226
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
P R L SF+ + + K++VF +T +H EL S +LG + LH
Sbjct: 227 CPEDKRFSLLFSFL--------KRTDEKVIVFFSTCSSVMFHGELFS-LLGFSAGV--LH 275
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
+ Q R VF F K VL TDVAARGLD+P V WIVQY P+ +Y+HRVGRT
Sbjct: 276 SGVKQDRRARVFDEFCEGKIKVLFSTDVAARGLDIPNVRWIVQYDPPTDPKEYIHRVGRT 335
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR G G +L+FL+P E ++ L++ + ++E+ K+ + D +
Sbjct: 336 ARAGAFGEALMFLLPHEKIFIKYLKHLGVEVDELTFKEP-------------QDITDYYI 382
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+T + L A + +++ YA + L+ +F+ +I L +KS
Sbjct: 383 KTISA------------NYYLEKGAKEALRGYLQAYAGHK--LKKVFDASKIELNKISKS 428
Query: 872 FALRDAPSV 880
F L P +
Sbjct: 429 FGLASMPKI 437
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 121/200 (60%), Gaps = 18/200 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKL---QEMR-PKISRKD 56
M IT++T +QQ +I ++G D+L + TGSGKTL++ IP +KL +E++ PK+
Sbjct: 23 MEITKLTEIQQKAIPYAMEGRDLLGIANTGSGKTLSFLIPAAEKLILEKEVKTPKV---- 78
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
++I PTRELA+QT + +L I GG K E +++KG +ILV TP
Sbjct: 79 ----LVISPTRELAMQTSRVAQRLFADHPDIRTVLFVGGTKKADENEQLKKGCAILVCTP 134
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH K +LK K+E VLDE+DRILD G+E+D+ E L L K++ Q+++ SAT
Sbjct: 135 GRLLDHLKSGLSLK--KIEIAVLDESDRILDIGFEKDMCEILTYLPKKR---QTLMFSAT 189
Query: 177 LTPATCWCKHTETLKFSKVE 196
T C+ + ++ KV+
Sbjct: 190 NTD-NVLCRSWLSKRYKKVQ 208
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 20/141 (14%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L K+E VLDE+DRILD G+E+D+ E L L K++ Q+++ SAT T V + ++
Sbjct: 145 LSLKKIEIAVLDESDRILDIGFEKDMCEILTYLPKKR---QTLMFSATNTDNVLCRSWLS 201
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
+ + D + LKQ F+V P R L SF+ + +
Sbjct: 202 KRY---------KKVQVKIDDKITAAGLKQSFVVCPEDKRFSLLFSFL--------KRTD 244
Query: 310 SKMLVFMATQDMADYHTELLS 330
K++VF +T +H EL S
Sbjct: 245 EKVIVFFSTCSSVMFHGELFS 265
>gi|444724895|gb|ELW65481.1| ATP-dependent RNA helicase DDX55 [Tupaia chinensis]
Length = 877
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 251/484 (51%), Gaps = 48/484 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L + K+ +K+ + A
Sbjct: 304 LGFPHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLKREEKL-KKNQVGA 362
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 528
V+I PTRELA+Q E+ + K F + GG + + ++ G +I+VATPGRL
Sbjct: 363 VVITPTRELAIQIDEVLSHFTKHFPQLSQILWIGGRNPGEDVEKFKQQGGNIIVATPGRL 422
Query: 529 LDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
D + E + + +E LVLDEADR+LD G+E I LE L KQ+ ++ L S
Sbjct: 423 EDMFRRKAEGVDLASCMRSLEVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFS 479
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T V+ L L+NP++I + ++T P L+ ++V + L
Sbjct: 480 ATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENFYMVCKADEKFNQLVH 537
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ ++ K LVF +T +Y+ + L ++ + + +HG M + +R ++F
Sbjct: 538 FL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-KGVTTMCIHGKM-KDKRNKIF 588
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
FR ++SG+L+CTDV ARG+D+P V+W++QY PSS++ +VHR GRTAR+GH GS+L+F
Sbjct: 589 MDFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSALVF 648
Query: 764 LIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L+P E V L N++ ++E+KL+ +LL
Sbjct: 649 LLPMEESYVSFLAINQKCPLQEMKLQKHTVDLLP------------------------KL 684
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
+S L + + + + S+V+ YA + L IF K + A+ FAL P +
Sbjct: 685 KSMALTDRAVFEKGMRAFVSFVQAYAKHECSL--IFRLKDLDFASLARGFALLRMPKMPE 742
Query: 883 GIGK 886
GK
Sbjct: 743 LRGK 746
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 146/330 (44%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L + K+ +K+ + A
Sbjct: 304 LGFPHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLKREEKL-KKNQVGA 362
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
V+I PTRELA+Q E+ + K F + GG + + ++ G +I+VATPGR
Sbjct: 363 VVITPTRELAIQIDEVLSHFTKHFPQLSQILWIGGRNPGEDVEKFKQQGGNIIVATPGR- 421
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
L+ + R AE +++
Sbjct: 422 --------------------------LEDMFRRK-AEGVDL------------------- 435
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C +E LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 436 ASC---------MRSLEVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 483
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + ++T P L+ ++V + L F+
Sbjct: 484 QEVENLVRAGLRNPVRISVKEKGVAASSTQK--TPSRLENFYMVCKADEKFNQLVHFL-- 539
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 540 -----RNHKQEKHLVFFSTCACVEYYGKAL 564
>gi|440637342|gb|ELR07261.1| ATP-dependent RNA helicase dbp4 [Geomyces destructans 20631-21]
Length = 802
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 247/482 (51%), Gaps = 50/482 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L D+L ++TGSGKTLA+ +P+++ L R K + DG+ A+II P
Sbjct: 73 LTDIQSKAIPLALKSKDILGAAKTGSGKTLAFLVPVLENL--YRQKWTELDGLGALIISP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + ++ + GG ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAIQIFEVLRKIGRYHSFSA-GLVIGGRSLQEERERLGR-MNILVCTPGRMLQHMDQ 188
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRILD G++ + L+ L K + Q++L SAT T V LA
Sbjct: 189 TAAFEVDNLQMLVLDEADRILDMGFQTSVDAILDHLPKDR---QTMLFSATQTKKVSDLA 245
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L+ P + +H S P +L+QH+IV P +L L SFI +
Sbjct: 246 RLSLKEP------EYVAVHEAATS-ATPTTLQQHYIVVPLAEKLNTLYSFIRANLK---- 294
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+K++VFM++ + E + I LHG Q+ R ++ F S ++ L
Sbjct: 295 ---AKIVVFMSSGKQVRFVYESFRHIQ-PGIPLLHLHGRQKQTARLDITSKFSSSQNSCL 350
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARGLD P VDW++Q P + Y+HRVGRTAR G ++FL P+E + ++
Sbjct: 351 FATDVVARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYERAGRGVMFLDPTEEEGMLA 410
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+++++ IE+IK++ Q ++Q + Q L
Sbjct: 411 RLKHKKVPIEKIKVRTNKQQ-----------------------SVQKQLQVMCFQDPELK 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S+ R + Y + + IF +I L FA S L AP + K + ++L
Sbjct: 448 YLGQKAFVSYTR--SVYLQKDKEIFKIDEIDLEGFASSMGLPGAPKI--KFQKGNDAKKL 503
Query: 894 KN 895
KN
Sbjct: 504 KN 505
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L D+L ++TGSGKTLA+ +P+++ L R K + DG+ A+II P
Sbjct: 73 LTDIQSKAIPLALKSKDILGAAKTGSGKTLAFLVPVLENL--YRQKWTELDGLGALIISP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + ++ + GG ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAIQIFEVLRKIGRYHSFSA-GLVIGGRSLQEERERLGR-MNILVCTPGRMLQHMDQ 188
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G++ + L+ L K + Q++L SAT T
Sbjct: 189 TAAFEVDNLQMLVLDEADRILDMGFQTSVDAILDHLPKDR---QTMLFSATQT 238
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + ++ LVLDEADRILD G++ + L+ L K + Q++L SAT T V L
Sbjct: 188 QTAAFEVDNLQMLVLDEADRILDMGFQTSVDAILDHLPKDR---QTMLFSATQTKKVSDL 244
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P + +H S P +L+QH+IV P +L L SFI +
Sbjct: 245 ARLSLKEP------EYVAVHEAATS-ATPTTLQQHYIVVPLAEKLNTLYSFIRANLK--- 294
Query: 306 EDEESKMLVFMAT 318
+K++VFM++
Sbjct: 295 ----AKIVVFMSS 303
>gi|302653108|ref|XP_003018385.1| hypothetical protein TRV_07579 [Trichophyton verrucosum HKI 0517]
gi|291182028|gb|EFE37740.1| hypothetical protein TRV_07579 [Trichophyton verrucosum HKI 0517]
Length = 948
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 252/480 (52%), Gaps = 77/480 (16%)
Query: 409 GMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 468
GM T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 172 GMGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTG 229
Query: 469 AVIILPTRELALQTLEIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 526
A+II PTRELALQ + +L + S T+ V + GG ++E ++ KG+++L+ TPG
Sbjct: 230 ALIITPTRELALQIFGVARELMEHHSQTYGV---VIGGANRRAEAEKLNKGVNVLIGTPG 286
Query: 527 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 586
RLLDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K+ Q++L SAT
Sbjct: 287 RLLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKE--DRQTMLFSATQ 344
Query: 587 TPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
T V+ LA ++L+ P+ I+ D H+T D ++Q FI+ R + L SF+
Sbjct: 345 TTKVEDLARISLKPGPLYIN-VDHKKEHSTV------DGVEQGFIICEAHKRFLLLFSFL 397
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKT 705
++ + K++VF ++ + Y++ELL+ + ++ LHG + Q +RT F
Sbjct: 398 -------KKNAKKKIIVFFSSCNSVKYYSELLNYI---DLPVLSLHGKLKQQKRTNTFFE 447
Query: 706 FRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLI 765
F + G LICTDVAARGLD+P VD+IVQ P
Sbjct: 448 FCNSAQGTLICTDVAARGLDIPAVDYIVQLDPPDD------------------------- 482
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV + L+ R+ + E + ++++++ Q E
Sbjct: 483 PSEVGFINHLREARVPVVEFEF--PTKHIINI---------------------QSQLEKL 519
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ Q L+ SA +GY S++ YAS+S LR +F+ ++ L AKS+ P V +G
Sbjct: 520 ISQNYYLNQSAKEGYRSYLHAYASHS--LRSVFDVNKLDLVKVAKSYGFTTPPRVDITLG 577
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 115/180 (63%), Gaps = 9/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +QQ I P L G D+L ++TGSGKTLA+ IP ++ L+ + K ++G A
Sbjct: 173 MGFTTMTEIQQRGIPPSLAGRDILGAAKTGSGKTLAFLIPAVEILRSL--KFKPRNGTGA 230
Query: 61 VIILPTRELALQTLEIFTKLCK--SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+II PTRELALQ + +L + S T+ V + GG ++E ++ KG+++L+ TPGR
Sbjct: 231 LIITPTRELALQIFGVARELMEHHSQTYGV---VIGGANRRAEAEKLNKGVNVLIGTPGR 287
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH + TE F ++ LV+DEADRIL+ G+E ++ + + IL K+ Q++L SAT T
Sbjct: 288 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKE--DRQTMLFSATQT 345
>gi|29351650|gb|AAH49261.1| Ddx10 protein, partial [Mus musculus]
Length = 891
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 256/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 91 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 147
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 148 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 205
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 206 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 263
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q++I+
Sbjct: 264 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQ 315
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 316 KISVLFSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 367
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 368 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 427
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE + +V++L +++ ++EIK+ + +L D
Sbjct: 428 DGEALLILLPSEEQGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 466
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + +FN ++ + +A S L
Sbjct: 467 --VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFNVSKLPITEYALSLGLA 522
Query: 876 DAPSV 880
AP +
Sbjct: 523 VAPRI 527
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 108 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 165
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 166 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 223
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 224 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 273
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 213 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 269
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 270 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 322
Query: 296 FI 297
F+
Sbjct: 323 FL 324
>gi|346319733|gb|EGX89334.1| ATP-dependent RNA helicase DBP4 [Cordyceps militaris CM01]
Length = 812
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 245/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+++ P
Sbjct: 74 LTDVQARAIPLALQGKDILGAAKTGSGKTLAFLVPLLEKLH--RAQWTEYDGLGALVLSP 131
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + ++ + GG+ +K E R+ + ++IL+ TPGR+L H
Sbjct: 132 TRELAVQIYEVLRKIGRYHSFSA-GLVIGGKNLKEEAERLTR-MNILICTPGRMLQHLDQ 189
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ D+ +E L K++ Q+++ SAT + V LA
Sbjct: 190 TAGFDANNLQLLVLDEADRIMDMGFQADVDALVEHLPKER---QTLMFSATQSKKVSDLA 246
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H S P +L+QH+IVTP +L L FI +
Sbjct: 247 RLSLKDP------EYVSVHEAAIS-ATPTNLQQHYIVTPLHEKLDTLFGFIKASLK---- 295
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF+++ + E L I LHG Q +R E+ FR+ K L
Sbjct: 296 ---SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQKQVQRLEITNRFRAAKEACL 351
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TDV ARG+D P V W++Q P + Y+HRVGRTAR G ++LFL S E +++
Sbjct: 352 FATDVVARGIDFPAVHWVIQVDCPEDTDTYIHRVGRTARFERNGRAVLFLETSEEAGMIK 411
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
+L+ ++I I+ I +K+ Q SVK + +S Q L
Sbjct: 412 KLEQKKIPIQMINIKE--QKKRSVKND---------------------LQSMCFQNPDLK 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+ R KD + +FN K++ L +A S L P +
Sbjct: 449 YLGQKSFISYTR-SIHLQKD-KEVFNLKKLDLDAYASSLGLPGTPQI 493
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+++ P
Sbjct: 74 LTDVQARAIPLALQGKDILGAAKTGSGKTLAFLVPLLEKLH--RAQWTEYDGLGALVLSP 131
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + ++ + GG+ +K E R+ + ++IL+ TPGR+L H
Sbjct: 132 TRELAVQIYEVLRKIGRYHSFSA-GLVIGGKNLKEEAERLTR-MNILICTPGRMLQHLDQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ D+ +E L K++ Q+++ SAT
Sbjct: 190 TAGFDANNLQLLVLDEADRIMDMGFQADVDALVEHLPKER---QTLMFSAT 237
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ D+ +E L K++ Q+++ S
Sbjct: 179 TPGRMLQHLDQTAGFDANNLQLLVLDEADRIMDMGFQADVDALVEHLPKER---QTLMFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L++P + +H S P +L+QH+IVTP +L L
Sbjct: 236 ATQSKKVSDLARLSLKDP------EYVSVHEAAIS-ATPTNLQQHYIVTPLHEKLDTLFG 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 289 FIKASLK-------SKIIVFLSS 304
>gi|281204091|gb|EFA78287.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 837
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/478 (33%), Positives = 248/478 (51%), Gaps = 46/478 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E ++T +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + DG+
Sbjct: 112 EWGKFNKMTDIQRAAIPHALCGRDVLGAAKTGSGKTLAFIVPMLELL--WRNNWTENDGV 169
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+I+ PTRELA+Q E+ K+ ++ + GG+ + EK +I ++IL+ATPGR
Sbjct: 170 GAIILAPTRELAIQIFEVLRIAGKTHSFSA-GLIIGGKDVAGEKKKI-GTMNILIATPGR 227
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LL H T+ + S ++ L+LDEADRILD G+ + + + L K + Q++L SAT T
Sbjct: 228 LLQHMDETDGFQCSNLQMLILDEADRILDMGFSKSLNAIISNLPKAR---QTLLFSATQT 284
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
+++ LA ++L++P I D D + P +L+Q VT ++ L SFI
Sbjct: 285 KSIKDLARLSLKDPEYISVYDK-------DQVSTPKNLQQTICVTALDKKIDLLYSFIKT 337
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
SK +VF++T + E+ + F+LHG M Q R EVF+ F
Sbjct: 338 HLT-------SKTIVFLSTCKQVRFMYEMFK-LCNPGCRLFQLHGKMKQWTRLEVFQNFS 389
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
G L TDVAARGLD P VDW+VQ P Y+HRVGRTAR G S L+PS
Sbjct: 390 HFSEGTLFATDVAARGLDFPEVDWVVQMDCPEDIQTYIHRVGRTARYHQGGKSFTVLLPS 449
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E + +L +++ K++ D+ A+ N A F S
Sbjct: 450 EKEEFTKLMDKQ------------------KIKYDIMD-ANPNQLVTIQAQLAGFLSEKP 490
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ K L A K + S+++ + + ++ +++F ++++L F+KS L AP + G G
Sbjct: 491 EHKYL---AQKAFVSYLK--SLHRQENKNMFKLEELNLADFSKSMGLPGAPKIQFGTG 543
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 109/178 (61%), Gaps = 7/178 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
++T +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + DG+ A+I
Sbjct: 116 FNKMTDIQRAAIPHALCGRDVLGAAKTGSGKTLAFIVPMLELL--WRNNWTENDGVGAII 173
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
+ PTRELA+Q E+ K+ ++ + GG+ + EK +I ++IL+ATPGRLL H
Sbjct: 174 LAPTRELAIQIFEVLRIAGKTHSFSA-GLIIGGKDVAGEKKKI-GTMNILIATPGRLLQH 231
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T+ + S ++ L+LDEADRILD G+ + + + L K + Q++L SAT T +
Sbjct: 232 MDETDGFQCSNLQMLILDEADRILDMGFSKSLNAIISNLPKAR---QTLLFSATQTKS 286
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T+ + S ++ L+LDEADRILD G+ + + + L K + Q++L SAT T +++ LA
Sbjct: 235 TDGFQCSNLQMLILDEADRILDMGFSKSLNAIISNLPKAR---QTLLFSATQTKSIKDLA 291
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 306
++L++P I D D + P +L+Q VT ++ L SFI
Sbjct: 292 RLSLKDPEYISVYDK-------DQVSTPKNLQQTICVTALDKKIDLLYSFIKTHLT---- 340
Query: 307 DEESKMLVFMATQDMADYHTELL 329
SK +VF++T + E+
Sbjct: 341 ---SKTIVFLSTCKQVRFMYEMF 360
>gi|397481832|ref|XP_003812141.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Pan paniscus]
Length = 600
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 269/509 (52%), Gaps = 60/509 (11%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 CWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI---FTKLCKSFTWIVPSWLTG--- 503
I++ L K+ +K + A+II PTRELA+Q E+ FTK F+ I+ W+ G
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQIL--WIGGRNP 123
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQG 558
GE ++ K ++G +I+VATPGRL D + E L + ++ LVLDEADR+LD G
Sbjct: 124 GEDVEKFK---QQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG 180
Query: 559 YERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS 618
+E I LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++
Sbjct: 181 FEASINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK 237
Query: 619 LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 678
P L+ +++V + L F+ ++ K LVF +T +Y+ + L
Sbjct: 238 --TPSRLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALE 288
Query: 679 TVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAP 738
VL + + +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY P
Sbjct: 289 -VLVKGVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPP 346
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSV 797
S+++ +VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+K + +LL
Sbjct: 347 SNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLP- 405
Query: 798 KMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
+++ A A + FE + K + S+V+ YA + +L I
Sbjct: 406 ------------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--I 440
Query: 858 FNFKQIHLGHFAKSFALRDAPSVISGIGK 886
F K + A+ FAL P + GK
Sbjct: 441 FRLKDLDFASLARGFALLRMPKMPELRGK 469
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 146/330 (44%), Gaps = 80/330 (24%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEI---FTKLCKSFTWIVPSWLTG---GEKMKSEKARIRKGISILVATPGRL 119
TRELA+Q E+ FTK F+ I+ W+ G GE ++ K ++G +I+VATPGRL
Sbjct: 91 TRELAIQIDEVLSHFTKHFPEFSQIL--WIGGRNPGEDVEKFK---QQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVRSLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 -----RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|365984605|ref|XP_003669135.1| hypothetical protein NDAI_0C02320 [Naumovozyma dairenensis CBS 421]
gi|343767903|emb|CCD23892.1| hypothetical protein NDAI_0C02320 [Naumovozyma dairenensis CBS 421]
Length = 764
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 260/506 (51%), Gaps = 45/506 (8%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P + P K LN G ++T +Q+ SI L G DVL ++TGSGKTLA+ IPI+
Sbjct: 43 FKDLP-LSPPTLKGLN-GAAFLKLTDIQRESIPISLKGYDVLGSAKTGSGKTLAFLIPIL 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A++I PTRELA+Q E+ K+ ++T + + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALVISPTRELAMQIYEVLLKIG-TYTSLSAGLVIGGKDVKFES 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
R+ K I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERLSK-INILIGTPGRILQHLDQAIALNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLP 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ Q++L SAT + ++ LA ++L + + D + T + P +L+Q ++
Sbjct: 217 ASR---QTLLFSATQSQSLGDLARLSLTDYKTVGTMDPSK-DKTDEGAATPKTLEQSYVE 272
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
T +L L SFI ++ KM+VF+++ + E L I+ LH
Sbjct: 273 TELADKLDILYSFIKSHLKH-------KMIVFLSSSKQVHFVYETFRK-LQPGISLMHLH 324
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q RTE F + L TDV ARG+D P VDW++Q P + Y+HRVGR
Sbjct: 325 GRQKQKARTETLDKFSRAQQVCLFATDVVARGIDFPSVDWVIQVDCPEDADTYIHRVGRA 384
Query: 752 ARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
AR G +G SL+ L P E + ++ L +++I++ ++ +K
Sbjct: 385 ARYGKKGKSLIMLTPQECEPFLKRLASKKIKLGKLTIK---------------------- 422
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+ +++ +S + + L K + S+VR + Y + + +FNF+ + FA
Sbjct: 423 -QAKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYIQKDKEVFNFESLATEAFAN 479
Query: 871 SFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + I G+ +ELKN
Sbjct: 480 SLGLPGAPKIKIKGMKAIDRAKELKN 505
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 108/172 (62%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G DVL ++TGSGKTLA+ IPI++KL R K + DG+ A++I
Sbjct: 63 KLTDIQRESIPISLKGYDVLGSAKTGSGKTLAFLIPILEKL--YREKWTEFDGLGALVIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ ++T + + GG+ +K E R+ K I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLLKIG-TYTSLSAGLVIGGKDVKFESERLSK-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L + Q++L SAT
Sbjct: 179 QAIALNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPASR---QTLLFSAT 227
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L + Q++L SAT + ++ LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPASR---QTLLFSATQSQSLGDLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + + D + T + P +L+Q ++ T +L L SFI ++
Sbjct: 240 LTDYKTVGTMDPSK-DKTDEGAATPKTLEQSYVETELADKLDILYSFIKSHLKH------ 292
Query: 310 SKMLVFMAT 318
KM+VF+++
Sbjct: 293 -KMIVFLSS 300
>gi|383851919|ref|XP_003701478.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Megachile
rotundata]
Length = 589
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 253/485 (52%), Gaps = 53/485 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ + +T VQ SI +L+G DV + TGSGKT+A+ +P+++ LQ+ K + I A
Sbjct: 24 LKFSHMTPVQAASIPLLLEGKDVAAEAVTGSGKTIAFLVPLLEILQKREEKWKPME-IGA 82
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL- 528
+II PTRELA+Q E+ + + + L GG + + + G +I+VATPGRL
Sbjct: 83 IIISPTRELAVQINEVLQQFLNNIPNLKEVLLVGGTTITEDIDNFKAGANIIVATPGRLE 142
Query: 529 --LDHCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
L +CK K +E L+LDEADR+LD G+ I L L + + ++ L SAT
Sbjct: 143 DILSNCKSINLAACVKSLEILILDEADRLLDLGFSATIDTILSYLPRLR---RTGLFSAT 199
Query: 586 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
T +Q L L+NP I + ++ P +LK ++ + + +L + FI
Sbjct: 200 QTKELQHLIRAGLRNPALITVKEKANVST-------PSNLKNNYTIVNAEYKLSMMIDFI 252
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKT 705
+ N+ K ++F++T DY ++ +L +I +HG M +++R +VF
Sbjct: 253 QNQGTNL------KYMIFLSTCACVDYFNSVIQAML-PSIKVLAIHGKM-KNKRYKVFNE 304
Query: 706 FRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLI 765
FR VK+G+LICTDV ARG+D+ VDW++QY P S++ +VHR GRTAR+G+EG++LLFL+
Sbjct: 305 FRLVKNGILICTDVMARGIDISEVDWVLQYDPPCSASSFVHRCGRTARIGNEGNALLFLL 364
Query: 766 PSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
+E V+ ++ N+++ +++I N+E + T+ + +
Sbjct: 365 ETEDAYVDFIKRNQKVNLQKI------------------------NLEPSVTSYEKCLKC 400
Query: 825 AVLQQK---ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
QK + A K + S+V+ Y + +L I K I LG A F L P +
Sbjct: 401 MRDLQKEDRLFFDKANKAFVSYVQAYNKHECNL--ILRLKDIDLGKLAMGFGLLRMPRMP 458
Query: 882 SGIGK 886
GK
Sbjct: 459 ELKGK 463
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 101/182 (55%), Gaps = 8/182 (4%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + +T VQ SI +L+G DV + TGSGKT+A+ +P+++ LQ+ K + I A
Sbjct: 24 LKFSHMTPVQAASIPLLLEGKDVAAEAVTGSGKTIAFLVPLLEILQKREEKWKPME-IGA 82
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL- 119
+II PTRELA+Q E+ + + + L GG + + + G +I+VATPGRL
Sbjct: 83 IIISPTRELAVQINEVLQQFLNNIPNLKEVLLVGGTTITEDIDNFKAGANIIVATPGRLE 142
Query: 120 --LDHCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L +CK K +E L+LDEADR+LD G+ I L L + + ++ L SAT
Sbjct: 143 DILSNCKSINLAACVKSLEILILDEADRLLDLGFSATIDTILSYLPRLR---RTGLFSAT 199
Query: 177 LT 178
T
Sbjct: 200 QT 201
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
+E L+LDEADR+LD G+ I L L + + ++ L SAT T +Q L L+NP
Sbjct: 160 LEILILDEADRLLDLGFSATIDTILSYLPRLR---RTGLFSATQTKELQHLIRAGLRNPA 216
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
I + ++ P +LK ++ + + +L + FI + N+ K ++
Sbjct: 217 LITVKEKANVST-------PSNLKNNYTIVNAEYKLSMMIDFIQNQGTNL------KYMI 263
Query: 315 FMATQDMADYHTELL 329
F++T DY ++
Sbjct: 264 FLSTCACVDYFNSVI 278
>gi|156717218|ref|NP_001096151.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Xenopus (Silurana)
tropicalis]
gi|148921499|gb|AAI46616.1| ddx10 protein [Xenopus (Silurana) tropicalis]
Length = 852
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 249/466 (53%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 97 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 154
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 155 RELAYQTFEVLRKVGRNHEFSA-GLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 212
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
T S ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA
Sbjct: 213 STFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKR---QTLLFSATQTKSVKDLAR 269
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
++L++P + +H P +L+Q+++V + ++ L SFI +
Sbjct: 270 LSLKDP------EYVWVHENA-KFSTPATLEQNYVVCELQQKINLLYSFIRNHLK----- 317
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
K +VF ++ Y L I LHG Q +R EV+ F KS VL
Sbjct: 318 --KKSIVFFSSCKEVQYLFRAFCR-LRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLF 374
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEE 774
TD+AARGLD P V+W++Q P + Y+HRVGRTAR G +LL L+PSEVK + ++
Sbjct: 375 ATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQ 434
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +++ I EIK+ + +L D +Q E+ + Q++ L
Sbjct: 435 LEEKKVPINEIKI--------------NPEKLMD---------VQGRLEAFLAQEQDLKE 471
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+A + + S++R + Y + +F+ ++ L +A+S L AP V
Sbjct: 472 TAQRCFVSYLR--SVYLMKNKEVFDVFKLPLTQYAQSLGLAVAPRV 515
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 97 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 154
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 155 RELAYQTFEVLRKVGRNHEFSA-GLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 212
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T S ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 213 STFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKR---QTLLFSATQTKS 263
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T T S ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ L
Sbjct: 211 ETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKR---QTLLFSATQTKSVKDL 267
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
A ++L++P + +H P +L+Q+++V + ++ L SFI
Sbjct: 268 ARLSLKDP------EYVWVHENA-KFSTPATLEQNYVVCELQQKINLLYSFI 312
>gi|157818683|ref|NP_001100290.1| probable ATP-dependent RNA helicase DDX10 [Rattus norvegicus]
gi|149041670|gb|EDL95511.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 (predicted) [Rattus
norvegicus]
Length = 874
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 264/503 (52%), Gaps = 54/503 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q++I+
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLFSFLRSHLT-------KKSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE + +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEQGMVQQLLQKKVPVKEIKI--------------NPEKLID------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + +F+ ++ + +A S L
Sbjct: 451 --VQKRLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFDVNKLPITEYALSLGLA 506
Query: 876 DAPSV--ISGIGKPKNKEELKNK 896
AP + + + K NKE KN+
Sbjct: 507 VAPRIRFLQKMEKQPNKELGKNQ 529
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 259
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|219120805|ref|XP_002185634.1| fructose-bisphosphate aldolase [Phaeodactylum tricornutum CCAP
1055/1]
gi|209582483|gb|ACI65104.1| fructose-bisphosphate aldolase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 627
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 242/488 (49%), Gaps = 44/488 (9%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
T +T +Q I L G D+L ++TGSGKTLA+ IP+++ L R + S DG AV+
Sbjct: 21 FTTMTDIQNACIPHALAGRDILGAARTGSGKTLAFLIPVLECL--YRNRFSPVDGPGAVV 78
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTRELA+Q ++ K + V L GG++ E+ +I++ATPGRLL H
Sbjct: 79 LSPTRELAVQIFQVLRMAGKYHAFSV-GLLIGGKRDFFEEQNQVGSTNIIIATPGRLLQH 137
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
+ T S + LVLDEADR+LD G+ + LE L + Q Q++L SAT T V
Sbjct: 138 LEQTPNFDTSDLRMLVLDEADRVLDMGFRDQLVRILEYLPTE--QRQTLLFSATQTNDVS 195
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA M+LQ P + D + PD+L+Q ++V P + +L A+ SF+ +N
Sbjct: 196 HLATMSLQKPEYLGVHDK-------EKTSTPDALQQSYVVVPLEHKLDAVYSFVKSHLKN 248
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
K ++F AT Y EL + L I LHG + Q++RTE++ +
Sbjct: 249 -------KSIIFFATCSQVRYAWELFCS-LRPGIPVMALHGKLVQTKRTEIYFDYLQRPH 300
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK- 770
VL TD+AARGLD VDW+VQ AP Y+HR GRTAR G SLL L P E K
Sbjct: 301 AVLFATDIAARGLDFKDVDWVVQADAPEDKAMYIHRAGRTARYRAGGKSLLMLTPPEEKN 360
Query: 771 -LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
+E +Q + + ++ LK N T + S V
Sbjct: 361 GFIELVQGK--KAAKVPLKKLSIN------------------PTKTVVVTERAASLVASN 400
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKN 889
L+ A K Y S++R + + R IF+ K + L FAKS L P++ K+
Sbjct: 401 PNLNRLAKKAYESYIR--SIFLMPNREIFDVKDMSLDGFAKSLGLASTPNLRFLKNSAKD 458
Query: 890 KEELKNKK 897
+EEL++ K
Sbjct: 459 REELRSVK 466
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 146/329 (44%), Gaps = 80/329 (24%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
T +T +Q I L G D+L ++TGSGKTLA+ IP+++ L R + S DG AV+
Sbjct: 21 FTTMTDIQNACIPHALAGRDILGAARTGSGKTLAFLIPVLECL--YRNRFSPVDGPGAVV 78
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
+ PTRELA+Q ++ K + V L GG++ E+ +I++ATPGRLL
Sbjct: 79 LSPTRELAVQIFQVLRMAGKYHAFSV-GLLIGGKRDFFEEQNQVGSTNIIIATPGRLL-- 135
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
+HL +Q P F +
Sbjct: 136 ------------QHL-------------------------EQTPNFDT------------ 146
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
S + LVLDEADR+LD G+ + LE L + Q Q++L SAT T V
Sbjct: 147 ----------SDLRMLVLDEADRVLDMGFRDQLVRILEYLPTE--QRQTLLFSATQTNDV 194
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
LA M+LQ P + D + PD+L+Q ++V P + +L A+ SF+ +
Sbjct: 195 SHLATMSLQKPEYLGVHDK-------EKTSTPDALQQSYVVVPLEHKLDAVYSFVKSHLK 247
Query: 303 NVNEDEESKMLVFMATQDMADYHTELLST 331
N K ++F AT Y EL +
Sbjct: 248 N-------KSIIFFATCSQVRYAWELFCS 269
>gi|323455736|gb|EGB11604.1| hypothetical protein AURANDRAFT_1519, partial [Aureococcus
anophagefferens]
Length = 427
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 220/386 (56%), Gaps = 27/386 (6%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ + + T VQ ++ + D L+ + TGSGKTLAYA+P+++ L K R DG
Sbjct: 1 LGLAKPTEVQTRALLALRSKKDALLVAPTGSGKTLAYALPVLEALAAR--KKGRGDGAGC 58
Query: 470 VIILPTRELALQTLEIFTKLCKSF-TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
+++ PTREL LQ ++ + + + IVP +TGGE+ KSEKAR+RKG+S++VATPGRL
Sbjct: 59 LVLAPTRELCLQIADVVEVVARKYDVSIVPGAITGGERRKSEKARLRKGLSLVVATPGRL 118
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH K T LKF ++ +VLDE DR+LD G+ I + + L + + ++L++AT+T
Sbjct: 119 LDHLKSTACLKFDALDWVVLDEVDRLLDMGFGPQIDDIIRRLGAK--TYVTVLVTATITA 176
Query: 589 AVQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
+ LA L ++ ++ A +++ +P++L Q + + KLRL ALA+ +
Sbjct: 177 KLADLAKAHLGRDHALVEVAKRETAPGAVETIAMPETLAQSYAICTLKLRLGALAAML-- 234
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLS----------TVLGENIAFFKLHGSMSQS 697
+ +K LVF++T A++H +LL+ +A +LHG+M +
Sbjct: 235 -----RDHPHAKTLVFVSTCASAEFHADLLNRPECRRLWEGATKAPRVA-GRLHGNMKRD 288
Query: 698 ERTEVFKTFRSVKSGVLICTDVAARGLDLPL--VDWIVQYTAPSSSTDYVHRVGRTARVG 755
ER + F + VL+ TDVAARGLD V+ +VQ AP + YVHR GR R G
Sbjct: 289 ERRGAYVEFCRSGAAVLVATDVAARGLDFDAAKVERVVQLDAPRDAGTYVHRCGRAGRAG 348
Query: 756 HEGSSLLFLIPSEVKLVEELQNRRIR 781
+ GSS L L+PSE ++ L RR+R
Sbjct: 349 NAGSSTLVLLPSERPFLDALA-RRLR 373
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 72/331 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + + T VQ ++ + D L+ + TGSGKTLAYA+P+++ L K R DG
Sbjct: 1 LGLAKPTEVQTRALLALRSKKDALLVAPTGSGKTLAYALPVLEALAAR--KKGRGDGAGC 58
Query: 61 VIILPTRELALQTLEIFTKLCKSF-TWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
+++ PTREL LQ ++ + + + IVP +TGGE+ KSEKAR+RKG+S++VATPGRL
Sbjct: 59 LVLAPTRELCLQIADVVEVVARKYDVSIVPGAITGGERRKSEKARLRKGLSLVVATPGRL 118
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
LDH K T LKF ++ +VLDE DR+LD G+ I + + L + + ++L++AT+T
Sbjct: 119 LDHLKSTACLKFDALDWVVLDEVDRLLDMGFGPQIDDIIRRLGAK--TYVTVLVTATIT- 175
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+ +K HL D A +E+ K++ T
Sbjct: 176 -------AKLADLAKA-HLGRDHA--------------LVEVAKRE-----------TAP 202
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
AV+ +A +P++L Q + + KLRL ALA+ +
Sbjct: 203 GAVETIA--------------------------MPETLAQSYAICTLKLRLGALAAML-- 234
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ +K LVF++T A++H +LL+
Sbjct: 235 -----RDHPHAKTLVFVSTCASAEFHADLLN 260
>gi|254577701|ref|XP_002494837.1| ZYRO0A10802p [Zygosaccharomyces rouxii]
gi|238937726|emb|CAR25904.1| ZYRO0A10802p [Zygosaccharomyces rouxii]
Length = 771
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 287/590 (48%), Gaps = 83/590 (14%)
Query: 330 STKKKIKKLKEYNIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAP 389
S +K+I+K ++ I+ E+ KT+ + P ++ FQ+ P + N R LK S
Sbjct: 10 SQRKQIRKREDQYIE----ELHTKTQEFNNPKATYFQDLP-LSNAVLRGLKDAS------ 58
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
++T +Q+ SI L G DVL ++TGSGKTLA+ IP
Sbjct: 59 ----------------------YVKLTDIQRDSIPVSLKGNDVLGAAKTGSGKTLAFLIP 96
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
+++KL R + + DG+ A+II PTRELA+Q E+ K+ ++ + GG+ +K
Sbjct: 97 VLEKL--YRERWTEYDGVGALIISPTRELAMQIYEVLIKIGTHCSFSA-GLVIGGKDVKF 153
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
E RI K I+IL+ TPGRLL H + L ++ LVLDEADR LD G+++ + +
Sbjct: 154 EAERISK-INILIGTPGRLLQHLDQSVGLNIDNLQMLVLDEADRCLDMGFKKTLDAIVSN 212
Query: 570 LKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHF 629
L P Q++L SAT + ++ LA ++L + + T + + P++L+QH+
Sbjct: 213 LP---PIRQTLLFSATQSQSLNDLARLSLTDYKTV----GTPANVSGSQPETPETLQQHY 265
Query: 630 IVTPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
IV +L L SFI KC KM+VF ++ + E L I+
Sbjct: 266 IVVELADKLDTLFSFIKTHLKC---------KMIVFFSSSKQVHFVYETFRK-LQPGISL 315
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
LHG Q RTE F + LI TDV +RG+D P VDW+VQ P + Y+HR
Sbjct: 316 MHLHGRQKQRARTETLDKFSRAQQVCLIATDVVSRGIDFPAVDWVVQVDCPENVDTYIHR 375
Query: 748 VGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
VGR+AR G +G SL+ L P E + ++ L+ RRI N+L++K
Sbjct: 376 VGRSARYGKQGKSLIMLTPQENEPFLQRLKGRRIE----------PNMLNIKQ------- 418
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
+ +++ +S + + L K + S+VR + Y + +F F Q+
Sbjct: 419 ------SKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYIQKDHEVFKFDQLPTE 470
Query: 867 HFAKSFALRDAPSV-ISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKK 915
FA+S L AP + + G+G + ++LKN + K + G F K
Sbjct: 471 EFAQSLGLPGAPKIKLRGMGAIERSKDLKNAPRQLLKLNKADENGEFEDK 520
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 122/221 (55%), Gaps = 26/221 (11%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G DVL ++TGSGKTLA+ IP+++KL R + + DG+ A+II
Sbjct: 61 KLTDIQRDSIPVSLKGNDVLGAAKTGSGKTLAFLIPVLEKL--YRERWTEYDGVGALIIS 118
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ ++ + GG+ +K E RI K I+IL+ TPGRLL H
Sbjct: 119 PTRELAMQIYEVLIKIGTHCSFSA-GLVIGGKDVKFEAERISK-INILIGTPGRLLQHLD 176
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL------- 177
+ L ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 177 QSVGLNIDNLQMLVLDEADRCLDMGFKKTLDAIVSNL---PPIRQTLLFSATQSQSLNDL 233
Query: 178 ------------TPATCWCKHTETLKFSKVEHLVLDEADRI 206
TPA ET + + ++V++ AD++
Sbjct: 234 ARLSLTDYKTVGTPANVSGSQPETPETLQQHYIVVELADKL 274
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 18/131 (13%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L ++ LVLDEADR LD G+++ + + L P Q++L SAT + ++ LA ++
Sbjct: 181 LNIDNLQMLVLDEADRCLDMGFKKTLDAIVSNL---PPIRQTLLFSATQSQSLNDLARLS 237
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + T + + P++L+QH+IV +L L SFI KC
Sbjct: 238 LTDYKTV----GTPANVSGSQPETPETLQQHYIVVELADKLDTLFSFIKTHLKC------ 287
Query: 308 EESKMLVFMAT 318
KM+VF ++
Sbjct: 288 ---KMIVFFSS 295
>gi|51593782|gb|AAH80729.1| Ddx10 protein [Mus musculus]
Length = 744
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 248/467 (53%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 27 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 84
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 85 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 142
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA
Sbjct: 143 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSVKDLA 199
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H P +L+Q++I+ ++ L SF+ +
Sbjct: 200 RLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFSFLRSHLKK--- 249
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
K +VF ++ Y + L I+ LHG Q R EV+ F ++ VL
Sbjct: 250 ----KSIVFFSSCKEVQYLYRVFCR-LRPGISILALHGRQQQMRRMEVYNEFVRKRAAVL 304
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TD+AARGLD P V+W++Q+ P + Y+HR GRTAR +G +LL L+PSE + +V+
Sbjct: 305 FATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEQGMVQ 364
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
+L +++ ++EIK+ + +L D +Q ES + Q + L
Sbjct: 365 QLLQKKVPVKEIKI--------------NPEKLID---------VQKKLESFLAQDQDLK 401
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A + + S++R + Y + +FN ++ + +A S L AP +
Sbjct: 402 ERAQRCFVSYIR--SVYLMKDKEVFNVSKLPITEYALSLGLAVAPRI 446
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 27 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 84
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 85 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 142
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 143 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 192
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 132 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 188
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 189 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 241
Query: 296 FI 297
F+
Sbjct: 242 FL 243
>gi|449269740|gb|EMC80491.1| putative ATP-dependent RNA helicase DDX10, partial [Columba livia]
Length = 816
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 267/523 (51%), Gaps = 67/523 (12%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G D+L ++TGSGKTLA+ +P ++ L
Sbjct: 14 PLSKKTL-KGLQEAQYRVVTEIQRQTIGLALQGKDILGAAKTGSGKTLAFIVPALELL-- 70
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT ++ K+ K+ + + GG+ +K E RI
Sbjct: 71 YRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSA-GLVIGGKDLKEESERIHH 129
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I++L+ TPGRLL H T S ++ L+LDEADRILD G+ + LE L K++
Sbjct: 130 -INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAILENLPKKR-- 186
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L Q+++V +
Sbjct: 187 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHERA-KFSTPATLDQNYVVCDLQQ 238
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF A+ Y + L + LHG Q
Sbjct: 239 KVNMLYSFLRTHLKK-------KTIVFFASCKEVQYLFRVFCK-LQPGLPVLALHGKQHQ 290
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F K+ VL TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 291 MKRMEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKE 350
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL L+PSE K +VE+L R++ + EIK+ + +L D
Sbjct: 351 GGEALLVLLPSEEKGMVEQLAQRKVPVTEIKI--------------NPEKLTD------- 389
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ++ + Q + L A + + S++R + Y + +F+ ++ L +A S L
Sbjct: 390 --IQKRLQAFLAQDQELKDKAQRCFVSYLR--SVYLMKNKEVFDVFKLPLAEYALSLGLA 445
Query: 876 DAPSV---------------ISGIGKPKNKEELKNKKMAINKE 903
AP V +G+ K E+ KN +I+KE
Sbjct: 446 MAPRVRFLQRVQKQLSAKEAANGMDHLKETEQNKNSVSSIDKE 488
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G D+L ++TGSGKTLA+ +P ++ L R + + DG+ +II P
Sbjct: 31 VTEIQRQTIGLALQGKDILGAAKTGSGKTLAFIVPALELL--YRQQWTSADGLGVLIISP 88
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT ++ K+ K+ + + GG+ +K E RI I++L+ TPGRLL H
Sbjct: 89 TRELAYQTFKVLRKVGKNHEFSA-GLVIGGKDLKEESERIHH-INMLICTPGRLLQHMDE 146
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T S ++ L+LDEADRILD G+ + LE L K++ Q++L SAT T + K
Sbjct: 147 TSYFYASDLQMLILDEADRILDMGFADTMNAILENLPKKR---QTLLFSATQTKSV---K 200
Query: 186 HTETLKFSKVEHLVLDEADRI-----LDQGY 211
L E++ + E + LDQ Y
Sbjct: 201 DLARLSLKDPEYVWVHERAKFSTPATLDQNY 231
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ L+LDEADRILD G+ + LE L K++ Q++L S
Sbjct: 136 TPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAILENLPKKR---QTLLFS 192
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L Q+++V + ++ L S
Sbjct: 193 ATQTKSVKDLARLSLKDP------EYVWVHERA-KFSTPATLDQNYVVCDLQQKVNMLYS 245
Query: 296 FI 297
F+
Sbjct: 246 FL 247
>gi|353240793|emb|CCA72645.1| probable HCA4-can suppress the U14 snoRNA rRNA processing function
[Piriformospora indica DSM 11827]
Length = 769
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 245/479 (51%), Gaps = 48/479 (10%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
K+ L +G I +T +Q S+ L G DVL ++TGSGKTLA+ IPI++ L +R K
Sbjct: 62 KRGLKKGYFIN-MTDIQAKSLPFSLQGKDVLGAARTGSGKTLAFLIPILEVL--LRKKWG 118
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
+DG+ A+II PTRELA+Q ++ K+ T+ + GG+ +K E R+ K ++ILV
Sbjct: 119 PQDGLGALIISPTRELAMQIFDVLRKIGGYHTFSA-GLVIGGKNLKDESDRLAK-MNILV 176
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
ATPGRLL H T ++ LVLDEADRILD G+ + + + L K + Q++L
Sbjct: 177 ATPGRLLQHMDQTVGFDCENLQLLVLDEADRILDMGFAKALNAIVAHLPKSR---QTLLF 233
Query: 583 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
SAT T +V LA ++L++P+ + + H+ P L+Q++ + +L L
Sbjct: 234 SATQTESVSDLARLSLKDPVHVGVKEEN--HDA----ATPKGLEQYYTICELPRKLDVLF 287
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SFI Q K LVF +T + E L + LHG QS+R E+
Sbjct: 288 SFIKTHLQ-------IKALVFFSTCKQVRFAFETFCK-LHPGVPLMHLHGKQKQSKRLEI 339
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F+ F + K L TD+AARGLD P VDW+VQ AP + Y+HRVGRTAR +G LL
Sbjct: 340 FQKFTTAKHAFLFATDIAARGLDFPAVDWVVQLDAPEDADTYIHRVGRTARYQSQGKGLL 399
Query: 763 FLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L+PSE + LQ + I + IK+K S ME ++
Sbjct: 400 VLLPSEEEGFTAALQKKGISPQNIKVKS------SQTME-----------------IKNH 436
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+S Q + + + S++R + Y + + F + + L FA++ L AP V
Sbjct: 437 LQSFAFQDPDIKYLGQRAFISYLR--SIYLQKDKATFKLEGLPLEEFAEALGLPGAPRV 493
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q S+ L G DVL ++TGSGKTLA+ IPI++ L +R K +DG+ A+II P
Sbjct: 73 MTDIQAKSLPFSLQGKDVLGAARTGSGKTLAFLIPILEVL--LRKKWGPQDGLGALIISP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ T+ + GG+ +K E R+ K ++ILVATPGRLL H
Sbjct: 131 TRELAMQIFDVLRKIGGYHTFSA-GLVIGGKNLKDESDRLAK-MNILVATPGRLLQHMDQ 188
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+ + + + L K + Q++L SAT T
Sbjct: 189 TVGFDCENLQLLVLDEADRILDMGFAKALNAIVAHLPKSR---QTLLFSATQT 238
>gi|326914387|ref|XP_003203507.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like, partial
[Meleagris gallopavo]
Length = 658
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 253/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L
Sbjct: 79 PLSKKTL-KGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELL-- 135
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT ++ K+ K+ + + GG+ +K E RI
Sbjct: 136 YRLQWTSADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSA-GLIIGGKDLKEESERIHH 194
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I++L+ TPGRLL H T S ++ L+LDEADRILD G+ + +E L K++
Sbjct: 195 -INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR-- 251
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L Q++IV +
Sbjct: 252 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLDQNYIVCELQH 303
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF A+ Y + L + LHG Q
Sbjct: 304 KINVLYSFLRSHLKK-------KSIVFFASCKEVQYLFRVFCK-LQPGLPVLALHGKQQQ 355
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F K+ VL TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 356 MKRMEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKE 415
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL L+PSE K +VE+L R++ + EIK+ N E
Sbjct: 416 GGEALLVLLPSEEKGMVEQLAQRKVPVNEIKI----------------------NPEK-I 452
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
T +Q ++ + Q + L A + + S++R + Y + +F+ ++ L +A S L
Sbjct: 453 TDIQKRMQAFLAQDQELKEKAQRCFVSYLR--SVYLMKNKEVFDVFKLPLAEYALSLGLA 510
Query: 876 DAPSV 880
AP V
Sbjct: 511 MAPRV 515
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L R + + DG+ +II P
Sbjct: 96 VTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELL--YRLQWTSADGLGVLIISP 153
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT ++ K+ K+ + + GG+ +K E RI I++L+ TPGRLL H
Sbjct: 154 TRELAFQTFKVLRKVGKNHDFSA-GLIIGGKDLKEESERIHH-INMLICTPGRLLQHMDE 211
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T S ++ L+LDEADRILD G+ + +E L K++ Q++L SAT T + K
Sbjct: 212 TSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSV---K 265
Query: 186 HTETLKFSKVEHLVLDEADRI-----LDQGY 211
L E++ + E + LDQ Y
Sbjct: 266 DLARLSLKDPEYVWVHEKAKFSTPATLDQNY 296
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ L+LDEADRILD G+ + +E L K++ Q++L S
Sbjct: 201 TPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 257
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L Q++IV + ++ L S
Sbjct: 258 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLDQNYIVCELQHKINVLYS 310
Query: 296 FI 297
F+
Sbjct: 311 FL 312
>gi|164656665|ref|XP_001729460.1| hypothetical protein MGL_3495 [Malassezia globosa CBS 7966]
gi|159103351|gb|EDP42246.1| hypothetical protein MGL_3495 [Malassezia globosa CBS 7966]
Length = 801
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 245/470 (52%), Gaps = 44/470 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ S+ L G DVL ++TGSGKTLA+ IP++++L R + S DG+ A+++ P
Sbjct: 71 MTPIQKASLPASLRGRDVLGSARTGSGKTLAFLIPVLERL--YRQRWSHTDGLGALVVSP 128
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ + S T+ + GG+ + E+ R+RK ++IL+ATPGRLL H
Sbjct: 129 TRELAMQIFDVLRSIGGSHTFSA-GLVIGGKDLTHEQDRLRK-MNILIATPGRLLQHLDQ 186
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T S ++ LVLDEADRILD G+ + LE L + Q++L SAT T V+ LA
Sbjct: 187 TVGFDASNLQVLVLDEADRILDMGFANTLNAILEHLPSSR---QTLLYSATQTRRVKDLA 243
Query: 595 GMTLQNP--IQIDAADSTD-IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
++L +P I + D+TD +++ S P L+Q +++ +L L SF+ Q
Sbjct: 244 RLSLSDPALITVQDPDATDPTSSSSSSSSTPRHLEQFYMLVDLPRKLDMLFSFLCSHTQ- 302
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
K+LVFM++ + E+ L + LHG Q R ++F FR K
Sbjct: 303 ------CKVLVFMSSCRQVQFAHEVFCK-LRPGLPLLALHGKQKQPRRLKIFDEFRRSKH 355
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK- 770
L TD+AARGLD P VDW+VQ P S+ Y+HRVGRTAR G +LLF++P+E
Sbjct: 356 AALFATDIAARGLDFPAVDWVVQVDVPDSADTYIHRVGRTARYHAHGKALLFVLPTEQNG 415
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
++ L+ + I +IK +D +S +++ L Q
Sbjct: 416 MLAALERVHVPITDIKARDAKLQSISPQLQAFL-----------------------FQDV 452
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L A K + S+VR KD + +F + L FA S L AP +
Sbjct: 453 ELKHLAQKAFVSYVR-SVHLHKD-KTMFQVAALPLNEFASSLGLPGAPKI 500
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ S+ L G DVL ++TGSGKTLA+ IP++++L R + S DG+ A+++ P
Sbjct: 71 MTPIQKASLPASLRGRDVLGSARTGSGKTLAFLIPVLERL--YRQRWSHTDGLGALVVSP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ + S T+ + GG+ + E+ R+RK ++IL+ATPGRLL H
Sbjct: 129 TRELAMQIFDVLRSIGGSHTFSA-GLVIGGKDLTHEQDRLRK-MNILIATPGRLLQHLDQ 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ + LE L + Q++L SAT T
Sbjct: 187 TVGFDASNLQVLVLDEADRILDMGFANTLNAILEHLPSSR---QTLLYSATQT 236
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F S ++ LVLDEADRILD G+ + LE L + Q++L S
Sbjct: 176 TPGRLLQHLDQTVGFDASNLQVLVLDEADRILDMGFANTLNAILEHLPSSR---QTLLYS 232
Query: 236 ATLTPAVQRLAGMTLQNP--IQIDAADSTD-IHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
AT T V+ LA ++L +P I + D+TD +++ S P L+Q +++ +L
Sbjct: 233 ATQTRRVKDLARLSLSDPALITVQDPDATDPTSSSSSSSSTPRHLEQFYMLVDLPRKLDM 292
Query: 293 LASFILGKCQNVNEDEESKMLVFMAT 318
L SF+ Q K+LVFM++
Sbjct: 293 LFSFLCSHTQ-------CKVLVFMSS 311
>gi|326433402|gb|EGD78972.1| hypothetical protein PTSG_01945 [Salpingoeca sp. ATCC 50818]
Length = 845
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 255/496 (51%), Gaps = 58/496 (11%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+ EFP I KK L + + T +Q+ +++ L G DVL ++TGSGKTLA+ IP++
Sbjct: 57 FTEFP-ISNRTKKGLADA-GFIKPTRIQKATLKHALAGRDVLGAAKTGSGKTLAFLIPVL 114
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R + SR GI AV++ PTRELA QT ++ ++ GG +K EK
Sbjct: 115 EKLN--RERFSRDLGIGAVVVSPTRELAQQTYNTLVQVATGHEMSCALFI-GGNNVKIEK 171
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+ +I++ TPGRL+ H T F ++ LVLDEADR+LD G++ ++ I+
Sbjct: 172 T-MAATRNIIICTPGRLVQHMDETPNFGFDNLQVLVLDEADRLLDSGFKEEVDR---IVS 227
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ P Q++L SAT T V LA ++L NP+ I+ +H D P LKQ ++
Sbjct: 228 EMPPHRQTLLFSATQTAEVDELARLSLHNPVFIN------VHK--DQAATPARLKQCYVE 279
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE---NIAFF 688
P ++ L SFI ++ K +VF+A + + LL + ++ F
Sbjct: 280 VPLHEKINLLYSFI-------ESHKKHKTMVFLACRKQVN----LLYKIFCRRKPGVSIF 328
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
+L G S R E + F K+ VL+ TDVAARGLD+P V+W++Q P S Y+HRV
Sbjct: 329 ELVGRRSLHTRQETLRKFSKAKAAVLLTTDVAARGLDIPNVNWVLQVDCPESVDTYIHRV 388
Query: 749 GRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD 808
GRTAR G G+++LFL+PSE+ +V++L+ R++ I ++ +R
Sbjct: 389 GRTARFGKNGNAMLFLLPSELNMVKQLEGRKVPIARKEIS---------------ARAVR 433
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYAS-YSKDLRHIFNFKQIHLGH 867
VET M E A ++ G +VR+ S Y++ + +F + L
Sbjct: 434 SIVET------MRREYATDPDMLML-----GKQYFVRYVRSVYNQANKDVFKVHALPLES 482
Query: 868 FAKSFALRDAPSVISG 883
FA S L AP+V G
Sbjct: 483 FAMSLGLPTAPNVRIG 498
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +++ L G DVL ++TGSGKTLA+ IP+++KL R + SR GI AV++ PT
Sbjct: 79 TRIQKATLKHALAGRDVLGAAKTGSGKTLAFLIPVLEKLN--RERFSRDLGIGAVVVSPT 136
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT ++ ++ GG +K EK + +I++ TPGRL+ H T
Sbjct: 137 RELAQQTYNTLVQVATGHEMSCALFI-GGNNVKIEKT-MAATRNIIICTPGRLVQHMDET 194
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
F ++ LVLDEADR+LD G++ ++ I+ + P Q++L SAT T
Sbjct: 195 PNFGFDNLQVLVLDEADRLLDSGFKEEVD---RIVSEMPPHRQTLLFSATQT 243
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T F ++ LVLDEADR+LD G++ ++ I+ + P Q++L SAT T V LA
Sbjct: 194 TPNFGFDNLQVLVLDEADRLLDSGFKEEVD---RIVSEMPPHRQTLLFSATQTAEVDELA 250
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 306
++L NP+ I ++H D P LKQ ++ P ++ L SFI
Sbjct: 251 RLSLHNPVFI------NVHK--DQAATPARLKQCYVEVPLHEKINLLYSFI-------ES 295
Query: 307 DEESKMLVFMATQ 319
++ K +VF+A +
Sbjct: 296 HKKHKTMVFLACR 308
>gi|307181203|gb|EFN68900.1| Probable ATP-dependent RNA helicase pitchoune [Camponotus
floridanus]
Length = 463
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 230/422 (54%), Gaps = 48/422 (11%)
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
+I+ PTREL++QT + +L K + L GG ++E ++ KGI+I+VATPGRL
Sbjct: 53 CIIMSPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLEKGINIIVATPGRL 111
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
LDH ++T + ++ LV+DEADRILD GYE ++ + + IL K++ ++L SAT TP
Sbjct: 112 LDHLQNTPGFLYKNLQCLVIDEADRILDIGYEEELKQIINILPKRR---LTMLFSATQTP 168
Query: 589 AVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V + + L+ PI + D+ + + D L+Q ++ P + R + L +F+
Sbjct: 169 KVTTITTLALKKEPIYVGVDDNKE-------MATVDGLQQGYVACPSEKRFLLLFTFLK- 220
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++++ K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 221 ------KNKKKKIMVFFSSCMSVKYHHELLNYI---DLPVMSIHGKQKQTKRTTTFYQFC 271
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIP 766
+ +G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL L P
Sbjct: 272 NASTGILLCTDVAARGLDIPDVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 331
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ R+ + E E +++AD +Q+ E +
Sbjct: 332 EELGFLRYLKEARVPVNE--------------YEFSWNKIAD---------IQLQLEKLI 368
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
+ LH SA + + ++VR Y S+ L+ +F+ + + L AKSF P+V IG
Sbjct: 369 SKNYFLHQSAKEAFKNYVRAYDSHH--LKQVFDIETLDLAKVAKSFGFTVPPAVDLKIGY 426
Query: 887 PK 888
K
Sbjct: 427 SK 428
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
+I+ PTREL++QT + +L K + L GG ++E ++ KGI+I+VATPGRL
Sbjct: 53 CIIMSPTRELSMQTFGVLKELMK-YHHHTYGLLMGGANRQTEAQKLEKGINIIVATPGRL 111
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
LDH ++T + ++ LV+DEADRILD GYE ++ + + IL K++ ++L SAT TP
Sbjct: 112 LDHLQNTPGFLYKNLQCLVIDEADRILDIGYEEELKQIINILPKRR---LTMLFSATQTP 168
>gi|26342749|dbj|BAC35031.1| unnamed protein product [Mus musculus]
Length = 681
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 260/495 (52%), Gaps = 56/495 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L++P + +H P +L+
Sbjct: 240 IENLPKKR---QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++I+ ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 290 QNYIICELHQKISVLFSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 TLALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR +G +LL L+PSE + +V++L +++ ++EIK+ + +
Sbjct: 402 RAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKI--------------NPEK 447
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
L D +Q ES + Q + L A + + S++R + Y + +FN ++ +
Sbjct: 448 LID---------VQKKLESFLAQDQDLKERAQRCFVSYIR--SVYLMKDKEVFNVSKLPI 496
Query: 866 GHFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 497 TEYALSLGLAVAPRI 511
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|392590331|gb|EIW79660.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 825
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/498 (32%), Positives = 257/498 (51%), Gaps = 49/498 (9%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
+A + ++ + P I + K+ L + +T +Q SI L G D+L ++TGSGKT
Sbjct: 48 DATSSSRAFADLP-ISNYTKRGLKKAF-FVDMTDIQASSIHLALQGKDILGAARTGSGKT 105
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+ +P+++ L R K +DG+ A+II PTRELA+Q ++ + + + G
Sbjct: 106 LAFLVPVLENL--YRNKWGPQDGLGALIISPTRELAVQIFDVLRSIG-GYHGFSAGLVIG 162
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G+ +K E+ R+ + ++ILVATPGRLL H T + ++ LVLDEADRILD G+ R +
Sbjct: 163 GKNLKDERERLSR-MNILVATPGRLLQHMDQTFGFESDNLQMLVLDEADRILDMGFARTL 221
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
+ L L K + Q++L SAT T +V +LA ++L +PI I D T S +P
Sbjct: 222 SALLSHLPKSR---QTLLFSATQTQSVAQLARLSLNDPIPIGVGD------VTSSSTMPS 272
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
SL QHF + P +L L SF+ + SK++VF+++ + E +
Sbjct: 273 SLSQHFSIVPLDRKLDVLWSFLKTHLK-------SKVIVFLSSGKQVRFVFETFRR-MQP 324
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ LHG Q+ R + F +++ VL TD+AARGLD P +DW+VQ AP +
Sbjct: 325 GVPLLHLHGKQKQTARLNTYARFTGMQNAVLFATDIAARGLDFPSIDWVVQVDAPEDADT 384
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD 802
Y+HRVGRTAR G LL L+PSE + + L + I+IE IK++D
Sbjct: 385 YIHRVGRTARYDSAGKGLLLLLPSEEEGMKAALDKKGIKIENIKIRD------------- 431
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+ ++Q ++ Q+ + + + S+VR KD + IF +
Sbjct: 432 ----------SKTQSIQNQLQNLAFQEPEIKYLGQRAFVSYVR-SVHLQKD-KSIFKLDE 479
Query: 863 IHLGHFAKSFALRDAPSV 880
+ + FA+S L AP +
Sbjct: 480 LPVESFAESLGLPGAPKI 497
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q SI L G D+L ++TGSGKTLA+ +P+++ L R K +DG+ A+II P
Sbjct: 77 MTDIQASSIHLALQGKDILGAARTGSGKTLAFLVPVLENL--YRNKWGPQDGLGALIISP 134
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ + + + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 135 TRELAVQIFDVLRSIG-GYHGFSAGLVIGGKNLKDERERLSR-MNILVATPGRLLQHMDQ 192
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
T + ++ LVLDEADRILD G+ R ++ L L K + Q++L SAT T +
Sbjct: 193 TFGFESDNLQMLVLDEADRILDMGFARTLSALLSHLPKSR---QTLLFSATQTQSVA 246
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++ LVLDEADRILD G+ R ++ L L K + Q++L S
Sbjct: 182 TPGRLLQHMDQTFGFESDNLQMLVLDEADRILDMGFARTLSALLSHLPKSR---QTLLFS 238
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V +LA ++L +PI I D T S +P SL QHF + P +L L S
Sbjct: 239 ATQTQSVAQLARLSLNDPIPIGVGD------VTSSSTMPSSLSQHFSIVPLDRKLDVLWS 292
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
F+ + SK++VF+++
Sbjct: 293 FLKTHLK-------SKVIVFLSS 308
>gi|261205556|ref|XP_002627515.1| ATP-dependent RNA helicase HAS1 [Ajellomyces dermatitidis SLH14081]
gi|239592574|gb|EEQ75155.1| ATP-dependent RNA helicase HAS1 [Ajellomyces dermatitidis SLH14081]
gi|239611275|gb|EEQ88262.1| ATP-dependent RNA helicase HAS1 [Ajellomyces dermatitidis ER-3]
Length = 607
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 239/473 (50%), Gaps = 79/473 (16%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P+L G DVL G
Sbjct: 176 MKFETMTEIQRRGIPPLLAGRDVL--------------------------------GTGV 203
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 204 IVISPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLVKGVNLLIATPGRLL 262
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH + T F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 263 DHLRDTPGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQTTK 320
Query: 590 VQRLAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L Q P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 321 VEDLARISLRQGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL--- 370
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 371 ----KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 423
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 424 ATQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPS 483
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L+ R+ + E + +++V Q E +
Sbjct: 484 EVGFLKHLKEARVPVVEFDFP--AKKIVNV---------------------QSQLEKLIG 520
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 521 QNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVHKLDLVKVAKSFGFPTPPRV 571
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 35/178 (19%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P+L G DVL G
Sbjct: 176 MKFETMTEIQRRGIPPLLAGRDVL--------------------------------GTGV 203
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 204 IVISPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLVKGVNLLIATPGRLL 262
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 263 DHLRDTPGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 318
>gi|449484603|ref|XP_002197738.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Taeniopygia
guttata]
Length = 824
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 272/535 (50%), Gaps = 67/535 (12%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ +Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L
Sbjct: 24 PLSKKTL-KGLQESQYRVVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELL-- 80
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT ++ K+ K+ + + GG+ +K E RI
Sbjct: 81 YRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSA-GLIIGGKDLKEESERIHH 139
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I++L+ TPGRLL H T S ++ L+LDEADRILD G+ + +E L K++
Sbjct: 140 -INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR-- 196
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L Q+++V +
Sbjct: 197 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLDQNYVVCELQQ 248
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L + LHG Q
Sbjct: 249 KVNMLYSFLRTHLKK-------KTIVFFSSCKEVQYLFRVFCK-LQPGLPVLALHGKQQQ 300
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F K+ VL TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 301 MKRMEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKE 360
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL L+PSE K +VE+L R++ I EIK+ + +L D
Sbjct: 361 GGEALLVLLPSEEKGMVEQLAQRKVPISEIKI--------------NPEKLTD------- 399
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ++ + Q + L A + + S++R + Y + +F+ ++ L +A S L
Sbjct: 400 --IQKRLQAFLAQDQELKEKAQRCFVSYLR--SVYLMKNKEVFDVFKLPLAEYALSLGLA 455
Query: 876 DAPSV---------------ISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKK 915
AP V +G + E+ +N +N+E K+ NFS K
Sbjct: 456 MAPRVRFLQRVRKQLCANEAANGEEHLEETEQNENALTLVNEETVEKRGTNFSGK 510
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L R + + DG+ +II P
Sbjct: 41 VTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELL--YRQQWTSADGLGVLIISP 98
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT ++ K+ K+ + + GG+ +K E RI I++L+ TPGRLL H
Sbjct: 99 TRELAYQTFKVLRKVGKNHEFSA-GLIIGGKDLKEESERIHH-INMLICTPGRLLQHMDE 156
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T S ++ L+LDEADRILD G+ + +E L K++ Q++L SAT T + K
Sbjct: 157 TSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSV---K 210
Query: 186 HTETLKFSKVEHLVLDEADRI-----LDQGY 211
L E++ + E + LDQ Y
Sbjct: 211 DLARLSLKDPEYVWVHEKAKFSTPATLDQNY 241
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ L+LDEADRILD G+ + +E L K++ Q++L S
Sbjct: 146 TPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 202
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L Q+++V + ++ L S
Sbjct: 203 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLDQNYVVCELQQKVNMLYS 255
Query: 296 FI 297
F+
Sbjct: 256 FL 257
>gi|239613981|gb|EEQ90968.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis ER-3]
gi|327353332|gb|EGE82189.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis ATCC
18188]
Length = 810
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 258/494 (52%), Gaps = 50/494 (10%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
+P ++ + P P + N + +T +Q +I L G D+L ++TGSGKTLA+
Sbjct: 47 SPEAFSDLPLSEPTL--NGLSASHFKSLTDIQAKAIPHALKGRDILGAAKTGSGKTLAFL 104
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
+P+++ L R + + DG+ A+++ PTRELA+Q E+ K+ + T+ + GG+ +
Sbjct: 105 VPLLELL--YRKQWTEYDGLGALVLSPTRELAIQIFEVLRKIGRHHTFSA-GLVIGGKSL 161
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
+ E+ R+ + ++ILV TPGR+L H T + ++ LVLDEADRI+D G++ + +
Sbjct: 162 QEEQERLGR-MNILVCTPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAII 220
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
+ L K++ Q++L SAT T V LA ++L+NP I +H T S P L+Q
Sbjct: 221 DHLPKER---QTMLFSATQTKKVSDLARLSLRNPEYIS------VHETAAS-ATPAKLQQ 270
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
++IVTP +L L SFI + SK++VF ++ + E + I+
Sbjct: 271 NYIVTPLPEKLDTLWSFIRSSLK-------SKIMVFFSSGKQVRFVYESFRH-MQPGISL 322
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
LHG Q R ++ K F + K L TD+AARGLD P VDW++Q P + Y+HR
Sbjct: 323 LHLHGRQKQGARVDITKKFSAAKHACLFSTDIAARGLDFPAVDWVIQVDCPEDADTYIHR 382
Query: 748 VGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
GRTAR G ++LFL PS E +++ L+ ++I IE+I ++ Q + +++
Sbjct: 383 AGRTARYERNGRAVLFLEPSEEAGMLKRLEQKKIPIEKINIRSKKQQSIKNQLQ------ 436
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
M F+ L K L K + S+V+ + + + + +F K + L
Sbjct: 437 ------------NMCFKDPAL--KYL---GQKAFISYVK--SIHVQKDKEVFVVKGLPLE 477
Query: 867 HFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 478 AYAASLGLPGAPRI 491
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQAKAIPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQT 237
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + ++ L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L+NP I +H T S P L+Q++IVTP +L L S
Sbjct: 234 ATQTKKVSDLARLSLRNPEYI------SVHETAAS-ATPAKLQQNYIVTPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIMVFFSS 302
>gi|258573769|ref|XP_002541066.1| ATP-dependent RNA helicase DDX18 [Uncinocarpus reesii 1704]
gi|237901332|gb|EEP75733.1| ATP-dependent RNA helicase DDX18 [Uncinocarpus reesii 1704]
Length = 568
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 230/422 (54%), Gaps = 47/422 (11%)
Query: 466 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
G +++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATP
Sbjct: 160 GTGVIVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANQRAEAEKLTKGVNLLIATP 218
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH ++T+ F ++ LV+DEADRIL+ G+E + + ++IL + Q++L SAT
Sbjct: 219 GRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDQMRQIVKILPSE--DRQTMLFSAT 276
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V+ LA ++L+ P+ I+ D H+T + L +Q +++ R + L SF
Sbjct: 277 QTTKVEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSF 329
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ + + K++VF ++ + YH ELL+ + ++ LHG Q +RT F
Sbjct: 330 L-------KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFF 379
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLF 763
F + K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR + +G SLLF
Sbjct: 380 EFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANGKGRSLLF 439
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L PSEV ++ L++ R+ + E + + +++V Q E
Sbjct: 440 LQPSEVGFLKHLKDARVPVVEFEFP--AKKIVNV---------------------QSQLE 476
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
+ Q L+ SA GY S+++ YAS+S LR +F+ ++ L AK F P V
Sbjct: 477 KLIGQNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVNKLDLVKVAKGFGFPTPPRVDIT 534
Query: 884 IG 885
+G
Sbjct: 535 LG 536
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 3/122 (2%)
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G +++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATP
Sbjct: 160 GTGVIVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANQRAEAEKLTKGVNLLIATP 218
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ F ++ LV+DEADRIL+ G+E + + ++IL + Q++L SAT
Sbjct: 219 GRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDQMRQIVKILPSE--DRQTMLFSAT 276
Query: 177 LT 178
T
Sbjct: 277 QT 278
>gi|169608057|ref|XP_001797448.1| hypothetical protein SNOG_07095 [Phaeosphaeria nodorum SN15]
gi|118575178|sp|Q0UMB9.1|DBP4_PHANO RecName: Full=ATP-dependent RNA helicase DBP4
gi|111064626|gb|EAT85746.1| hypothetical protein SNOG_07095 [Phaeosphaeria nodorum SN15]
Length = 803
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 243/467 (52%), Gaps = 46/467 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ ++ L G D+L ++TGSGKTL++ IP+++ L ++ + G+ A+I+ P
Sbjct: 72 MTDIQRKAVPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HVGADAGLGALILSP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ K+ K L GG+ ++SE+ + + ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLCKIGKHGHMFAAGLLIGGKSLESERQALPR-MNILVATPGRMLQHLSQ 189
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G++RD+ ++ L K++ Q++L SAT + V LA
Sbjct: 190 TAAFLVDDLKMLVLDEADRILDMGFQRDVDAIIDYLPKER---QTLLFSATQSKKVSDLA 246
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H D P SL+Q++I+ P + +L L SFI
Sbjct: 247 RLSLQDP------EYVSVH-AEDKSATPKSLQQNYIICPLEEKLDTLWSFIQAS------ 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
++SK+LVF ++ + E + I +HG Q R + F S K+ L
Sbjct: 294 -KKSKILVFFSSAKAVRFVYESFRH-MQPGIPLLHIHGRQKQGARLDTTAKFSSAKNSCL 351
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VD+++Q P Y+HRVGRTAR EG +LFL PSE + +++
Sbjct: 352 FATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEEGMLK 411
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ +E I ++ + +++ ++ Q L
Sbjct: 412 RLEAKKVPVEAINVR-----------------------QKKRQSIKEQLQNMCFQDPALK 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + ++V+ + Y + + +F K+ L FA S L P +
Sbjct: 449 YLGQKAFMTYVK--SVYLQKDKEVFQLKEYDLEAFAASLGLPGTPRI 493
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ ++ L G D+L ++TGSGKTL++ IP+++ L ++ + G+ A+I+ P
Sbjct: 72 MTDIQRKAVPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HVGADAGLGALILSP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ K L GG+ ++SE+ + + ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLCKIGKHGHMFAAGLLIGGKSLESERQALPR-MNILVATPGRMLQHLSQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRILD G++RD+ ++ L K++ Q++L SAT
Sbjct: 190 TAAFLVDDLKMLVLDEADRILDMGFQRDVDAIIDYLPKER---QTLLFSAT 237
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T F ++ LVLDEADRILD G++RD+ ++ L K++ Q++L S
Sbjct: 179 TPGRMLQHLSQTAAFLVDDLKMLVLDEADRILDMGFQRDVDAIIDYLPKER---QTLLFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++LQ+P + +H D P SL+Q++I+ P + +L L S
Sbjct: 236 ATQSKKVSDLARLSLQDP------EYVSVH-AEDKSATPKSLQQNYIICPLEEKLDTLWS 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI ++SK+LVF ++
Sbjct: 289 FIQAS-------KKSKILVFFSS 304
>gi|66272268|gb|AAH96386.1| ddx10 protein [Xenopus (Silurana) tropicalis]
Length = 700
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 249/466 (53%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 93 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 150
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 151 RELAYQTFEVLRKVGRNHEF-SAGLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 208
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
T S ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA
Sbjct: 209 STFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKR---QTLLFSATQTKSVKDLAR 265
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
++L++P + +H P +L+Q+++V + ++ L SFI +
Sbjct: 266 LSLKDP------EYVWVHENA-KFSTPATLEQNYVVCELQQKINLLYSFIRNHLK----- 313
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
K +VF ++ Y L I LHG Q +R EV+ F KS VL
Sbjct: 314 --KKSIVFFSSCKEVQYLFRAFCR-LRPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLF 370
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEE 774
TD+AARGLD P V+W++Q P + Y+HRVGRTAR G +LL L+PSEVK + ++
Sbjct: 371 ATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMFKQ 430
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +++ I EIK+ + +L D +Q E+ + Q++ L
Sbjct: 431 LEEKKVPINEIKI--------------NPEKLMD---------VQGRLEAFLAQEQDLKE 467
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+A + + S++R + Y + +F+ ++ L +A+S L AP V
Sbjct: 468 TAQRCFVSYLR--SVYLMKNKEVFDVFKLPLTQYAQSLGLAVAPRV 511
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 93 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 150
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 151 RELAYQTFEVLRKVGRNHEF-SAGLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 208
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T S ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 209 STFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKR---QTLLFSATQTKS 259
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T T S ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA
Sbjct: 208 TSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKR---QTLLFSATQTKSVKDLA 264
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
++L++P + +H P +L+Q+++V + ++ L SFI
Sbjct: 265 RLSLKDP------EYVWVHENA-KFSTPATLEQNYVVCELQQKINLLYSFI 308
>gi|167521868|ref|XP_001745272.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776230|gb|EDQ89850.1| predicted protein [Monosiga brevicollis MX1]
Length = 552
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 242/468 (51%), Gaps = 47/468 (10%)
Query: 413 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T+ T +Q+ ++ L G DVL ++TGSGKTLA+ IP+++ L R + S+ DG+ +II
Sbjct: 58 TRPTEIQRDALIKALKGQDVLAAAKTGSGKTLAFLIPVLEGL--FRQRWSKPDGVGGLII 115
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELALQT E+ TK+ F + + GG ++ EKA I +I++ TPGRLL H
Sbjct: 116 SPTRELALQTYEVLTKI-GCFHDMSAGLVVGGTTLEREKAVI-SNTNIIICTPGRLLQHM 173
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
T ++ LVLDEADRILD G+ + + LE L KQ+ Q++L SAT T +V+
Sbjct: 174 DETFGFSCDNLQMLVLDEADRILDMGFAKTLNAILENLPKQR---QTMLFSATQTKSVKD 230
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
LA ++L+ P + +H D P L Q ++ P +L L SFI +V
Sbjct: 231 LARLSLKMP------EFISVHEQ-DKTATPHKLVQAYMTVPLNQKLDVLFSFIRS---HV 280
Query: 653 NEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSG 712
N KMLVF+++ + E L + + L+G Q++R ++ F
Sbjct: 281 N----VKMLVFVSSCKQVRFIYETLRR-MRPGVPLLALYGKQKQAKRVAIYNDFSKKTHA 335
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLV 772
VL+ TD+AARGLD P VDW+ Q P Y+HRVGRTAR G EG +LL L+PSE +V
Sbjct: 336 VLLATDIAARGLDFPSVDWVFQLDCPEDVATYIHRVGRTARYGKEGKALLTLLPSESAMV 395
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
++L R++ + V E + S++ A + S E L QK
Sbjct: 396 QQLAERKVEV--------------VSTEANASKIKSITPRLKAFCAE-SPELKYLAQKC- 439
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ S+ R + + + + +F ++ L FA S L AP +
Sbjct: 440 -------FISYTR--SVFLQPNKEVFRIDELPLEEFALSLGLPAAPRI 478
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T+ T +Q+ ++ L G DVL ++TGSGKTLA+ IP+++ L R + S+ DG+ +II
Sbjct: 58 TRPTEIQRDALIKALKGQDVLAAAKTGSGKTLAFLIPVLEGL--FRQRWSKPDGVGGLII 115
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELALQT E+ TK+ F + + GG ++ EKA I +I++ TPGRLL H
Sbjct: 116 SPTRELALQTYEVLTKI-GCFHDMSAGLVVGGTTLEREKAVI-SNTNIIICTPGRLLQHM 173
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+ + + LE L KQ+ Q++L SAT T
Sbjct: 174 DETFGFSCDNLQMLVLDEADRILDMGFAKTLNAILENLPKQR---QTMLFSATQT 225
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 19/144 (13%)
Query: 188 ETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
ET FS ++ LVLDEADRILD G+ + + LE L KQ+ Q++L SAT T +V+ L
Sbjct: 175 ETFGFSCDNLQMLVLDEADRILDMGFAKTLNAILENLPKQR---QTMLFSATQTKSVKDL 231
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P + +H D P L Q ++ P +L L SFI +VN
Sbjct: 232 ARLSLKMP------EFISVHE-QDKTATPHKLVQAYMTVPLNQKLDVLFSFIRS---HVN 281
Query: 306 EDEESKMLVFMATQDMADYHTELL 329
KMLVF+++ + E L
Sbjct: 282 ----VKMLVFVSSCKQVRFIYETL 301
>gi|261193373|ref|XP_002623092.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis SLH14081]
gi|239588697|gb|EEQ71340.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis SLH14081]
Length = 810
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 258/494 (52%), Gaps = 50/494 (10%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
+P ++ + P P + N + +T +Q +I L G D+L ++TGSGKTLA+
Sbjct: 47 SPEAFSDLPLSEPTL--NGLSASHFKSLTDIQAKAIPHALKGRDILGAAKTGSGKTLAFL 104
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
+P+++ L R + + DG+ A+++ PTRELA+Q E+ K+ + T+ + GG+ +
Sbjct: 105 VPLLELL--YRKQWTEYDGLGALVLSPTRELAIQIFEVLRKIGRHHTFSA-GLVIGGKSL 161
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
+ E+ R+ + ++ILV TPGR+L H T + ++ LVLDEADRI+D G++ + +
Sbjct: 162 QEEQERLGR-MNILVCTPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAII 220
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
+ L K++ Q++L SAT T V LA ++L+NP I +H T S P L+Q
Sbjct: 221 DHLPKER---QTMLFSATQTKKVSDLARLSLRNPEYIS------VHETAAS-ATPAKLQQ 270
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
++IVTP +L L SFI + SK++VF ++ + E + I+
Sbjct: 271 NYIVTPLPEKLDTLWSFIRSSLK-------SKIMVFFSSGKQVRFVYESFRH-MQPGISL 322
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
LHG Q R ++ K F + K L TD+AARGLD P VDW++Q P + Y+HR
Sbjct: 323 LHLHGRQKQGARVDITKKFSAAKHACLFSTDIAARGLDFPAVDWVIQVDCPEDADTYIHR 382
Query: 748 VGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
GRTAR G ++LFL PS E +++ L+ ++I IE+I ++ Q + +++
Sbjct: 383 AGRTARYERNGRAVLFLEPSEEAGMLKRLEQKKIPIEKINIRSKKQQSIKNQLQ------ 436
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
M F+ L K L K + S+V+ + + + + +F K + L
Sbjct: 437 ------------NMCFKDPAL--KYL---GQKAFISYVK--SIHVQKDKEVFVVKGLPLE 477
Query: 867 HFAKSFALRDAPSV 880
+A S L AP +
Sbjct: 478 AYAASLGLPGAPRI 491
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQAKAIPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQT 237
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + ++ L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L+NP I +H T S P L+Q++IVTP +L L S
Sbjct: 234 ATQTKKVSDLARLSLRNPEYI------SVHETAAS-ATPAKLQQNYIVTPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIMVFFSS 302
>gi|154340431|ref|XP_001566172.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063491|emb|CAM39671.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 897
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 259/514 (50%), Gaps = 62/514 (12%)
Query: 377 RRLKPVSEALFAPTSYE-------EFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
R ++ ++E+ A TS E E P I + L G + T +T +Q+ ++ L G
Sbjct: 49 RVMEDIAESSEANTSTEHQYSKFTELP-ISQRTQMGLERG-HYTALTPIQKGALHLALAG 106
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL + IP++++L R S G+ A+++ PTRELALQ ++ +L
Sbjct: 107 FDVLGAAKTGSGKTLCFVIPVLERL--YREHWSSDMGVGALLLSPTRELALQIFKVM-QL 163
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
+ + LTGG ++ E+ R+ ISI+V TPGR+L H + L ++ +D
Sbjct: 164 VGYKHVLSAALLTGGRDVREERKRLH-AISIIVGTPGRVLHHLQDDAELVLDNMQLFCMD 222
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS 609
EADR+LD G+ I ILK PQ QS+L SAT T VQ LA M+L+NP +
Sbjct: 223 EADRLLDMGFREAITS---ILKYLPPQRQSLLFSATQTTDVQMLAQMSLKNPRYVSTQAI 279
Query: 610 TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDM 669
T + P +L Q+F+V +L AL F+ K++VF++T +
Sbjct: 280 T-------AAPTPMTLCQNFVVVELHRKLDALLMFL-------KRHPNDKIVVFVSTCNQ 325
Query: 670 ADYHTELLSTVLGE-NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
+ S +L + I L M Q R EVF TF KS VL CTDVA+RGLD PL
Sbjct: 326 VKFMHLAFSKILKKMRIPSMCLTSKMKQFRREEVFLTFCRCKSAVLFCTDVASRGLDFPL 385
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK 788
V W+VQY P S+ Y+HR GRTAR G G SLLFL P E ++ L ++ + + EI +K
Sbjct: 386 VHWVVQYDCPESAQTYIHRAGRTARAGARGVSLLFLTPREAPMLSYLHHKHVPLREITIK 445
Query: 789 DCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR--F 846
T+ Q F + V+Q L A K + +++R +
Sbjct: 446 PAY-----------------------LTSSQEIFVALVVQG--LKYEAQKAFIAYLRSVY 480
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+AS +++F + + FAKS L P +
Sbjct: 481 FASN----KNVFEVASLDVEAFAKSLGLLVVPDM 510
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q+ ++ L G DVL ++TGSGKTL + IP++++L R S G+ A+
Sbjct: 88 HYTALTPIQKGALHLALAGFDVLGAAKTGSGKTLCFVIPVLERL--YREHWSSDMGVGAL 145
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
++ PTRELALQ ++ +L + + LTGG ++ E+ R+ ISI+V TPGR+L
Sbjct: 146 LLSPTRELALQIFKVM-QLVGYKHVLSAALLTGGRDVREERKRLH-AISIIVGTPGRVLH 203
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H + L ++ +DEADR+LD G+ I ILK PQ QS+L SAT T
Sbjct: 204 HLQDDAELVLDNMQLFCMDEADRLLDMGFREAIT---SILKYLPPQRQSLLFSATQT 257
>gi|302813999|ref|XP_002988684.1| hypothetical protein SELMODRAFT_128612 [Selaginella moellendorffii]
gi|300143505|gb|EFJ10195.1| hypothetical protein SELMODRAFT_128612 [Selaginella moellendorffii]
Length = 594
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/509 (30%), Positives = 254/509 (49%), Gaps = 63/509 (12%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
P + P + L + + + T VQ +I + DV V + TGSGKTLA+ +P+++ L+
Sbjct: 14 PKLSPETLRVLEQQLGFLRATPVQVATIPLLCSFKDVAVDAATGSGKTLAFVVPVVEILR 73
Query: 456 EMR-PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARI 514
+ P + + A+II PTRELA Q + K K+ + L GG + ++ R+
Sbjct: 74 RLATPFLQENVQVGAMIISPTRELASQIFGVAQKFVKTLENLTALLLVGGTDVTADLERV 133
Query: 515 R-KGISILVATPGRLLDHCKHTETLKFSKVEH---------------------LVLDEAD 552
+ +G ++L+ TPGRL D + + L+F +E L+LDEAD
Sbjct: 134 KEQGGNVLIGTPGRLHDIMERSTALEFRHLEARTSDLSSLDTITSLFIVSFQILILDEAD 193
Query: 553 RILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDI 612
R+LD G++R ++ +E+L KQ+ ++ L SAT T AV+ L+ L+NP++++ +++
Sbjct: 194 RLLDMGFQRQVSAIIELLPKQR---RTGLFSATQTQAVEELSKAGLRNPVRVEV--RSEV 248
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 672
+ + P L ++ + + L +F+ E+ K +V+ T DY
Sbjct: 249 KGASTTFKTPAGLNIEYLECEGEEKSSQLVNFL-------RENASRKTIVYFMTCASVDY 301
Query: 673 HTELLSTVLG-ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDW 731
+L + +++ LHG M QS R + + F ++ +GVL CTDVAARGLD+P VDW
Sbjct: 302 WGTVLPRLKTLKDVPIVVLHGKMKQSVRVKALEKFTAMPAGVLFCTDVAARGLDIPGVDW 361
Query: 732 IVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL 791
IVQY P +VHRVGRTAR+G G +L+FL+P E E L+ R + IE+ +D
Sbjct: 362 IVQYDPPQDPNVFVHRVGRTARMGRAGDALVFLLPKEDAYAEFLRIRNVPIEK---RD-- 416
Query: 792 QNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYS 851
+T + +A ++ + + K + S+ R Y +
Sbjct: 417 --------------------KTEVPHIIPKLRAAAMKDRDVMEKGLKAFVSYFRAYKEHH 456
Query: 852 KDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
IF +KQ+ LG A SF L PS+
Sbjct: 457 --CTFIFQWKQLELGKIAMSFGLLQLPSM 483
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 159/338 (47%), Gaps = 54/338 (15%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR-PKISRKDGIY 59
+ + T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + P + +
Sbjct: 28 LGFLRATPVQVATIPLLCSFKDVAVDAATGSGKTLAFVVPVVEILRRLATPFLQENVQVG 87
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGR 118
A+II PTRELA Q + K K+ + L GG + ++ R++ +G ++L+ TPGR
Sbjct: 88 AMIISPTRELASQIFGVAQKFVKTLENLTALLLVGGTDVTADLERVKEQGGNVLIGTPGR 147
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L D + + L+F +E D + LD T+T
Sbjct: 148 LHDIMERSTALEFRHLEARTSDLSS--LD----------------------------TIT 177
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+L + L+LDEADR+LD G++R ++ +E+L KQ+ ++ L SAT
Sbjct: 178 ----------SLFIVSFQILILDEADRLLDMGFQRQVSAIIELLPKQR---RTGLFSATQ 224
Query: 239 TPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
T AV+ L+ L+NP++++ +++ + + P L ++ + + L +F+
Sbjct: 225 TQAVEELSKAGLRNPVRVEV--RSEVKGASTTFKTPAGLNIEYLECEGEEKSSQLVNFL- 281
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIK 336
E+ K +V+ T DY +L K +K
Sbjct: 282 ------RENASRKTIVYFMTCASVDYWGTVLPRLKTLK 313
>gi|119331088|ref|NP_001073193.1| probable ATP-dependent RNA helicase DDX10 [Gallus gallus]
gi|82197778|sp|Q5ZJF6.1|DDX10_CHICK RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
gi|53133616|emb|CAG32137.1| hypothetical protein RCJMB04_18j24 [Gallus gallus]
Length = 875
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 253/485 (52%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L
Sbjct: 79 PLSKKTL-KGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELL-- 135
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT ++ K+ K+ + + GG+ +K E RI
Sbjct: 136 YRLQWTSADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSA-GLIIGGKDLKEESERIHH 194
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I++L+ TPGRLL H T S ++ L+LDEADRILD G+ + +E L K++
Sbjct: 195 -INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR-- 251
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L Q++IV +
Sbjct: 252 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLDQNYIVCELQH 303
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF A+ Y + L + LHG Q
Sbjct: 304 KINVLYSFLRSHLKK-------KSIVFFASCKEVQYLFRVFCK-LQPGLPVLALHGKQQQ 355
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F K+ VL TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 356 MKRMEVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKE 415
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL L+PSE K +VE+L R++ + EIK+ N E
Sbjct: 416 GGEALLVLLPSEEKGMVEQLAQRKVPVNEIKI----------------------NPEK-I 452
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
T +Q ++ + Q + L A + + S++R + Y + +F+ ++ L +A S L
Sbjct: 453 TDIQKRMQAFLAQDQELKEKAQRCFVSYLR--SVYLMKNKEVFDVFKLPLAEYALSLGLA 510
Query: 876 DAPSV 880
AP V
Sbjct: 511 MAPRV 515
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 15/211 (7%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L R + + DG+ +II P
Sbjct: 96 VTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELL--YRLQWTSADGLGVLIISP 153
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT ++ K+ K+ + + GG+ +K E RI I++L+ TPGRLL H
Sbjct: 154 TRELAFQTFKVLRKVGKNHDFSA-GLIIGGKDLKEESERIHH-INMLICTPGRLLQHMDE 211
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCK 185
T S ++ L+LDEADRILD G+ + +E L K++ Q++L SAT T + K
Sbjct: 212 TSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS---VK 265
Query: 186 HTETLKFSKVEHLVLDEADRI-----LDQGY 211
L E++ + E + LDQ Y
Sbjct: 266 DLARLSLKDPEYVWVHEKAKFSTPATLDQNY 296
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ L+LDEADRILD G+ + +E L K++ Q++L S
Sbjct: 201 TPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 257
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L Q++IV + ++ L S
Sbjct: 258 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLDQNYIVCELQHKINVLYS 310
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADY 324
F+ + K +VF A+ Y
Sbjct: 311 FLRSHLKK-------KSIVFFASCKEVQY 332
>gi|443715023|gb|ELU07175.1| hypothetical protein CAPTEDRAFT_143878, partial [Capitella teleta]
Length = 497
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 245/469 (52%), Gaps = 55/469 (11%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L D+L ++TGSGKTLA+ IP+++KL R K + DG+ +II PT
Sbjct: 72 TEIQKEAIGIALQDNDILGAAKTGSGKTLAFLIPVLEKLN--RLKWTSMDGLGCLIISPT 129
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA Q E+ K+ K + V + GG+ +K E ARI +I++ TPGR+L H + T
Sbjct: 130 RELAYQIFEVIKKVGKHHDFSV-GLVIGGKSIKDEAARI-TSTNIVICTPGRMLQHLEET 187
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
++ LVLDEADRILD G+ R + +E L P+ Q++L SAT T +V+ LA
Sbjct: 188 AFFVADNLQILVLDEADRILDLGFARTMNAIIESLP---PERQTLLFSATQTKSVKDLAR 244
Query: 596 MTLQNPIQID----AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
++L++P+ + AA+ST P L+Q +IV ++ L SFI
Sbjct: 245 LSLKDPVYVSVHEKAANST-----------PSQLQQSYIVCELHEKISFLWSFI------ 287
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
+ +K+LVF+++ + + L IA LHG M Q R EV++ F +
Sbjct: 288 -KQHPRTKLLVFISSCKQVRFLHQALQK-FRPGIAISALHGGMKQMRRMEVYQEFCRKQH 345
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKL 771
VL+ TD+AARGLD P V+W+VQ P + Y+HR GRTAR +G S+L L PSE +
Sbjct: 346 MVLLATDIAARGLDFPAVNWVVQMDCPENVNTYIHRAGRTARYEKDGESILVLTPSEEAM 405
Query: 772 VEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKI 831
VE+LQ ++I +++I++ Q L S ++ L L V A A
Sbjct: 406 VEKLQEKKIPLDKIEVNP--QKLWS--LDKKLEYLCASEVTMKAHA-------------- 447
Query: 832 LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+A Y V F + + +F+ K++ FA S L P V
Sbjct: 448 --QAAFMAYLKHVYFQSD-----KEVFDLKKLDFEKFAFSLGLAITPRV 489
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L D+L ++TGSGKTLA+ IP+++KL R K + DG+ +II PT
Sbjct: 72 TEIQKEAIGIALQDNDILGAAKTGSGKTLAFLIPVLEKLN--RLKWTSMDGLGCLIISPT 129
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA Q E+ K+ K + V + GG+ +K E ARI +I++ TPGR+L H + T
Sbjct: 130 RELAYQIFEVIKKVGKHHDFSV-GLVIGGKSIKDEAARI-TSTNIVICTPGRMLQHLEET 187
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ LVLDEADRILD G+ R + +E L P+ Q++L SAT T
Sbjct: 188 AFFVADNLQILVLDEADRILDLGFARTMNAIIESL---PPERQTLLFSATQT 236
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 25/125 (20%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G+ R + +E L P+ Q++L SAT T +V+ LA ++L++P+ +
Sbjct: 198 LVLDEADRILDLGFARTMNAIIESL---PPERQTLLFSATQTKSVKDLARLSLKDPVYVS 254
Query: 258 ----AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKML 313
AA+ST P L+Q +IV ++ L SFI + +K+L
Sbjct: 255 VHEKAANST-----------PSQLQQSYIVCELHEKISFLWSFI-------KQHPRTKLL 296
Query: 314 VFMAT 318
VF+++
Sbjct: 297 VFISS 301
>gi|395844018|ref|XP_003794763.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Otolemur garnettii]
Length = 869
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 258/485 (53%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P +K L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSRKTL-KGLQEAQYRLVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKQEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ + +E L +++
Sbjct: 190 NINILVCTPGRLLQHMDETVSFHATNLQMLVLDEADRILDMGFADTMNAIIENLPRKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q+++V +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYVVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L ++ LHG Q
Sbjct: 300 KISVLFSFLRSHLK-------KKSIVFFSSCKEVQYLYRVFCR-LRPGVSILALHGRQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G +LL L+PSE K ++++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEEKAMLQQLLQKKVPVKEIKI--------------NPEKLVD------- 450
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q ES + Q + L A + + S++R + Y + +F+ ++ + +A S L
Sbjct: 451 --VQKKMESILAQDQHLKERAQRCFVSYIR--SIYLMKNKEVFDVSKLPIPEYALSLGLA 506
Query: 876 DAPSV 880
AP V
Sbjct: 507 VAPRV 511
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKQEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T + + ++ LVLDEADRILD G+ + +E L +++ Q++L SAT T +
Sbjct: 208 TVSFHATNLQMLVLDEADRILDMGFADTMNAIIENLPRKR---QTLLFSATQTKS 259
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L +++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATNLQMLVLDEADRILDMGFADTMNAIIENLPRKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q+++V + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYVVCELQQKISVLFS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|398018109|ref|XP_003862241.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
gi|322500470|emb|CBZ35547.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
Length = 897
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 225/420 (53%), Gaps = 31/420 (7%)
Query: 377 RRLKPVSEALFAPTSYE-------EFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
R L+ ++E+ A TS E E P I + L G + T +T +Q+ ++ L G
Sbjct: 49 RELEDIAESNEANTSTEHQYSKFTELP-ISQRTQMGLERG-HYTILTPIQKGTLHLALAG 106
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL + IP++++L R S G+ A+++ PTRELALQ ++ +L
Sbjct: 107 LDVLGAAKTGSGKTLCFVIPVLERL--YREHWSSDMGVGALLLSPTRELALQIFKVM-QL 163
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
+ + LTGG ++ E+ R+ ISI+V TPGR+L H + L ++ +D
Sbjct: 164 VGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRVLHHLQDDAELVLDNMQLFCMD 222
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS 609
EADR+LD G+ I L L PQ QS+L SAT T VQ LA M+L+NP +
Sbjct: 223 EADRLLDMGFREAITSILAYLP---PQRQSLLFSATQTTDVQMLAQMSLKNPRYVSTQAI 279
Query: 610 TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDM 669
T + P +L Q+F+V +L AL F+ K++VF++T +
Sbjct: 280 T-------AAPTPMTLCQNFVVVELHKKLDALLMFL-------KRHPNDKIVVFVSTCNQ 325
Query: 670 ADYHTELLSTVLGE-NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
+ S +L + I L M Q R EVF TF KS VL CTDVA+RGLD PL
Sbjct: 326 VKFMHRAFSKILKKMRIPSMCLTSKMKQFRREEVFLTFCRCKSAVLFCTDVASRGLDFPL 385
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK 788
V W+VQY P S+ Y+HR GRTAR G G SLLFL P E ++ L ++ + + EI +K
Sbjct: 386 VHWVVQYDCPESAQTYIHRAGRTARAGARGVSLLFLTPRETPMLSYLHHKHVPMREIAIK 445
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 103/177 (58%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q+ ++ L G DVL ++TGSGKTL + IP++++L R S G+ A+
Sbjct: 88 HYTILTPIQKGTLHLALAGLDVLGAAKTGSGKTLCFVIPVLERL--YREHWSSDMGVGAL 145
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
++ PTRELALQ ++ +L + + LTGG ++ E+ R+ ISI+V TPGR+L
Sbjct: 146 LLSPTRELALQIFKVM-QLVGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRVLH 203
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H + L ++ +DEADR+LD G+ I L L PQ QS+L SAT T
Sbjct: 204 HLQDDAELVLDNMQLFCMDEADRLLDMGFREAITSILAYL---PPQRQSLLFSATQT 257
>gi|449545829|gb|EMD36799.1| hypothetical protein CERSUDRAFT_114703 [Ceriporiopsis subvermispora
B]
Length = 766
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 254/489 (51%), Gaps = 52/489 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A+II P
Sbjct: 33 MTDIQAKSLPVSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPQDGLGALIISP 90
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ + + + GG+ +K E+ R+ K ++ILVATPGRLL H
Sbjct: 91 TRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNVKDERDRLSK-MNILVATPGRLLQHMDQ 148
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T +V LA
Sbjct: 149 TIGFECDNLQVLVLDEADRILDMGFKRTLSALLSHLPKSR---QTLLFSATQTESVADLA 205
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P+ + ++ HN P L+QH++V +L L SFI QN
Sbjct: 206 RLSLKDPVYVGVKEA---HNEG---ATPKGLEQHYVVCELDKKLDILWSFIKSHLQN--- 256
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
K LVFM++ + E + I LHG Q R F+ F S+K VL
Sbjct: 257 ----KTLVFMSSCKQVRFVFETFCK-MHPGIPLLHLHGKQKQMTRLSTFQRFTSMKHAVL 311
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TD+AARGLD P VDW++Q AP + Y+HRVGRTAR G LL L+PSE + + E
Sbjct: 312 FATDIAARGLDFPSVDWVLQVDAPEDAETYIHRVGRTARYESSGKGLLLLLPSEEEGMKE 371
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ + I I++IK+K + +++ ++ Q +
Sbjct: 372 ALEKKNIDIQKIKIK-----------------------ASKTQSVENQLQNLAFQDPEIK 408
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
+ + S+VR + Y + + +F Q+ + FA++ L P + K +KE
Sbjct: 409 YLGQRAFVSYVR--SVYLQKDKSVFKVDQLPVERFAQALGLPGMPKI-----KFLSKELA 461
Query: 894 KNKKMAINK 902
K KK A+ +
Sbjct: 462 KKKKNAMRQ 470
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K +DG+ A+II P
Sbjct: 33 MTDIQAKSLPVSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPQDGLGALIISP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ + + + GG+ +K E+ R+ K ++ILVATPGRLL H
Sbjct: 91 TRELAVQIFDVLRSIG-GYHSFSAGLVIGGKNVKDERDRLSK-MNILVATPGRLLQHMDQ 148
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
T + ++ LVLDEADRILD G++R ++ L L K + Q++L SAT T +
Sbjct: 149 TIGFECDNLQVLVLDEADRILDMGFKRTLSALLSHLPKSR---QTLLFSATQTESVA 202
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T+ F ++ LVLDEADRILD G++R ++ L L K + Q++L S
Sbjct: 138 TPGRLLQHMDQTIGFECDNLQVLVLDEADRILDMGFKRTLSALLSHLPKSR---QTLLFS 194
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L++P+ + ++ HN P L+QH++V +L L S
Sbjct: 195 ATQTESVADLARLSLKDPVYVGVKEA---HNEG---ATPKGLEQHYVVCELDKKLDILWS 248
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI QN K LVFM++
Sbjct: 249 FIKSHLQN-------KTLVFMSS 264
>gi|145539005|ref|XP_001455197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422996|emb|CAK87800.1| unnamed protein product [Paramecium tetraurelia]
Length = 680
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 192/605 (31%), Positives = 295/605 (48%), Gaps = 101/605 (16%)
Query: 372 PNVPTRRL----KPVSEAL-----------FAPTSYEEFPGIHPFMKKNLNEGMNITQVT 416
P VP ++L KP S L F +E+ IHP +K L I ++T
Sbjct: 80 PRVPMKQLVIHQKPQSVTLPSINVEQEGEVFTEQYFEDLQ-IHPNVKLGLKSSEYI-KMT 137
Query: 417 TVQQLSIQPILD-GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
+QQL+I PI+D + ++S+TGSGKTLAY +P+I L +I+R+ G Y +I+ PT
Sbjct: 138 KIQQLAI-PIVDTKANTFIKSETGSGKTLAYMVPLISHLMSAEVRITREQGTYILIVCPT 196
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
REL+LQ ++ K+ K IV L GGE EKAR+RKG++I+V TPGR+L H ++T
Sbjct: 197 RELSLQCVDAALKVGKKCPNIVVGALVGGENANHEKARLRKGVTIVVGTPGRILYHIQNT 256
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKPQFQSILLSA--------- 584
++ K+ + LV +E DRILD G+++DI + +E+ K P Q I++SA
Sbjct: 257 QSFKYLNIHTLVFEECDRILDMGFQKDIEQLIELFSDKIDIPSCQKIMVSAHVNQNICQI 316
Query: 585 ---TLTPAVQRLAGM-------TLQNPIQI-DAADSTDIHNTTD-SLVIPDSLKQHFIVT 632
+TP + G T IQI D D D + IP +LKQ++ +
Sbjct: 317 KGLEITPKNYKFVGFSKEFIKGTKNKDIQINDENQQCDWLGEGDPTWQIPSTLKQYYTLI 376
Query: 633 PPKLRLVALASFI---LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGEN----- 684
+L L ++I +GK K ++F++T D ++++ L V N
Sbjct: 377 QEHQKLAFLFAYIRTQIGK----------KTIIFVSTCDEVEFYSFLFQQVQFNNPFKKD 426
Query: 685 -----IAF-----FKLHGSMSQSERTEVFKTFRSVK---SGVLICTDVAARGLDLPLVDW 731
AF +KLHG++ Q +R++ + F+ K VLI T VA+RGLD P V
Sbjct: 427 QQQHKQAFITQEVYKLHGNIEQQQRSKTYFNFKKSKYQEGCVLISTSVASRGLDFPDVTN 486
Query: 732 IVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS--EVKLVEELQNRRIR----IEEI 785
I+ + P S DYV++VGRTAR+ G SL+ L + + +EE Q+ IE
Sbjct: 487 ILVFDPPDSYDDYVNKVGRTARINKNGISLMVLFENLESQQFIEETQSHLAAPLNLIESA 546
Query: 786 KLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR 845
+ Q L + ++ D + L + + + Q K + + Y S++R
Sbjct: 547 EYFKAFQYYLF-----ETKKIHD---KMPDKFLALMIKQKIKQDKDYQLQSRRAYVSFLR 598
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMA-INKEK 904
Y F K ++L + +KSFAL A S K+E K + IN+EK
Sbjct: 599 AYGRLKS-----FKIKTLNLHNLSKSFALEKAFS-------EDTKDERYQKDLKFINREK 646
Query: 905 SFKQR 909
F+QR
Sbjct: 647 -FRQR 650
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 120/187 (64%), Gaps = 4/187 (2%)
Query: 5 QVTTVQQLSIQPILD-GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
++T +QQL+I PI+D + ++S+TGSGKTLAY +P+I L +I+R+ G Y +I+
Sbjct: 135 KMTKIQQLAI-PIVDTKANTFIKSETGSGKTLAYMVPLISHLMSAEVRITREQGTYILIV 193
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL+LQ ++ K+ K IV L GGE EKAR+RKG++I+V TPGR+L H
Sbjct: 194 CPTRELSLQCVDAALKVGKKCPNIVVGALVGGENANHEKARLRKGVTIVVGTPGRILYHI 253
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKPQFQSILLSATLTPAT 181
++T++ K+ + LV +E DRILD G+++DI + +E+ K P Q I++SA +
Sbjct: 254 QNTQSFKYLNIHTLVFEECDRILDMGFQKDIEQLIELFSDKIDIPSCQKIMVSAHVNQNI 313
Query: 182 CWCKHTE 188
C K E
Sbjct: 314 CQIKGLE 320
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 36/171 (21%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKPQFQSVLLSA------ 236
++T++ K+ + LV +E DRILD G+++DI + +E+ K P Q +++SA
Sbjct: 254 QNTQSFKYLNIHTLVFEECDRILDMGFQKDIEQLIELFSDKIDIPSCQKIMVSAHVNQNI 313
Query: 237 ------TLTPAVQRLAGM-------TLQNPIQI-DAADSTDIHNTTD-SLVIPDSLKQHF 281
+TP + G T IQI D D D + IP +LKQ++
Sbjct: 314 CQIKGLEITPKNYKFVGFSKEFIKGTKNKDIQINDENQQCDWLGEGDPTWQIPSTLKQYY 373
Query: 282 IVTPPKLRLVALASFI---LGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
+ +L L ++I +GK K ++F++T D ++++ L
Sbjct: 374 TLIQEHQKLAFLFAYIRTQIGK----------KTIIFVSTCDEVEFYSFLF 414
>gi|50545487|ref|XP_500281.1| YALI0A20328p [Yarrowia lipolytica]
gi|74660175|sp|Q6CGD1.1|DBP4_YARLI RecName: Full=ATP-dependent RNA helicase DBP4
gi|49646146|emb|CAG84219.1| YALI0A20328p [Yarrowia lipolytica CLIB122]
Length = 740
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 251/487 (51%), Gaps = 54/487 (11%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
T VQ+ +I P L G D+L ++TGSGKTLA+ +P+++ L R K S DG+ A++I P
Sbjct: 62 CTDVQKRAIPPALQGHDLLGAARTGSGKTLAFLVPVLECL--FRNKWSDVDGLGALVISP 119
Query: 475 TRELALQTLEIFTKL--CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
TRELA+Q ++ K+ C SF+ + GG+ + E R+ K ++IL+ TPGRLL H
Sbjct: 120 TRELAVQIFQVLRKIGRCHSFS---AGLVIGGKDVAMEADRLAK-LNILICTPGRLLQHM 175
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
T S V+ LVLDEADRILD G+++ + LE L + Q++L SAT T +V
Sbjct: 176 DQTSGFDLSNVKMLVLDEADRILDMGFKKTMDAILENLPVDR---QTLLFSATQTKSVSD 232
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
LA ++L +P I A +TT S P +L+Q+++ + +L L F+ +
Sbjct: 233 LARLSLADPKYISAN-----PDTTSS--TPKNLEQNYVCVELQDKLDTLWGFLRTHTK-- 283
Query: 653 NEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSG 712
K++VF ++ Y E T L I LHG Q R +V F S
Sbjct: 284 -----FKIIVFFSSSKQVRYVYETFRT-LQPGIPLLHLHGKQKQGARMDVVSKFSKASSS 337
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV-KL 771
L TD+ ARG+D P V W+VQ P + Y+HRVGR+AR G G +LLFL P+E +
Sbjct: 338 CLFATDIVARGIDFPAVHWVVQVDCPEDAATYIHRVGRSARFGKSGKALLFLTPTEEPAM 397
Query: 772 VEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKI 831
++ L+ + I I ++ ++ + + +++ + F+S + K
Sbjct: 398 IQRLEAKHIPINKLTIRPNKKKSIKNQLQA------------------LCFKSPEI--KY 437
Query: 832 LHTSACKGYTSWVRFYAS-YSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNK 890
L G +++ +Y S + + + IF F++I FA+S L AP + G K K
Sbjct: 438 L------GQKAFISYYKSIFIQKDKEIFQFEKIPSEAFAESLGLPGAPQIKLGKSAEKMK 491
Query: 891 EELKNKK 897
EE KK
Sbjct: 492 EEANAKK 498
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 108/175 (61%), Gaps = 11/175 (6%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
T VQ+ +I P L G D+L ++TGSGKTLA+ +P+++ L R K S DG+ A++I P
Sbjct: 62 CTDVQKRAIPPALQGHDLLGAARTGSGKTLAFLVPVLECL--FRNKWSDVDGLGALVISP 119
Query: 66 TRELALQTLEIFTKL--CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
TRELA+Q ++ K+ C SF+ + GG+ + E R+ K ++IL+ TPGRLL H
Sbjct: 120 TRELAVQIFQVLRKIGRCHSFS---AGLVIGGKDVAMEADRLAK-LNILICTPGRLLQHM 175
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S V+ LVLDEADRILD G+++ + LE L + Q++L SAT T
Sbjct: 176 DQTSGFDLSNVKMLVLDEADRILDMGFKKTMDAILENLPVDR---QTLLFSATQT 227
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T S V+ LVLDEADRILD G+++ + LE L + Q++L SAT T +V L
Sbjct: 177 QTSGFDLSNVKMLVLDEADRILDMGFKKTMDAILENLPVDR---QTLLFSATQTKSVSDL 233
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L +P I A N + P +L+Q+++ + +L L F+ +
Sbjct: 234 ARLSLADPKYISA-------NPDTTSSTPKNLEQNYVCVELQDKLDTLWGFLRTHTK--- 283
Query: 306 EDEESKMLVFMATQDMADYHTELLST 331
K++VF ++ Y E T
Sbjct: 284 ----FKIIVFFSSSKQVRYVYETFRT 305
>gi|449709613|gb|EMD48846.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica KU27]
Length = 694
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 228/396 (57%), Gaps = 27/396 (6%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++FP I + LN+ IT +T +Q+ +I L G D++ ++TGSGKTLA+ IP+I
Sbjct: 91 FDQFP-ISKATIQLLNKNHFIT-MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLI 148
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSE 510
+ + R + + DG+ ++I+ PTRELA Q ++F + + FT + +TGG+ K E
Sbjct: 149 EFM--YRSRWTELDGLCSIILSPTRELAQQIFDVFASIAGERFT---AALITGGKDTK-E 202
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+A++ + +++L+ TPGRLL H +T + + L+LDEADRILD G+++D+ LE L
Sbjct: 203 EAKVIRLMNVLICTPGRLLYHLDNTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHL 262
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
KQ+ Q++L SAT T +VQ L ++L++P I + D H T P++L Q ++
Sbjct: 263 PKQR---QTMLFSATQTKSVQDLIRLSLRHPEYI-SVDEKAQHAT------PETLNQTYM 312
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ ++ L SFI SKM+VF T + E L + L
Sbjct: 313 LLGDGDKINVLFSFIRTHTN-------SKMIVFFQTTKEVRFFFETFKK-LRVGAVLYLL 364
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
+G SQ+ R E TF K G+L CTD+A+RGLD+ VDWIVQY P + Y+HRVGR
Sbjct: 365 YGRQSQNSRNEQLSTFTKEKRGILFCTDIASRGLDIQGVDWIVQYDCPEDTAQYIHRVGR 424
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
TAR+ H G +LL L +E +E+L+ ++ + ++
Sbjct: 425 TARINHNGQALLLLTHNEEAFIEQLEKAKVPLNRVE 460
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 114/176 (64%), Gaps = 10/176 (5%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ + R + + DG+ ++I+ P
Sbjct: 112 MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIEFM--YRSRWTELDGLCSIILSP 169
Query: 66 TRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
TRELA Q ++F + + FT + +TGG+ K E+A++ + +++L+ TPGRLL H
Sbjct: 170 TRELAQQIFDVFASIAGERFT---AALITGGKDTK-EEAKVIRLMNVLICTPGRLLYHLD 225
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+T + + L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +
Sbjct: 226 NTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKS 278
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +VQ L ++L++P I
Sbjct: 238 LILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKSVQDLIRLSLRHPEYI- 293
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ D H T P++L Q +++ ++ L SFI SKM+VF
Sbjct: 294 SVDEKAQHAT------PETLNQTYMLLGDGDKINVLFSFIRTHTN-------SKMIVFFQ 340
Query: 318 T 318
T
Sbjct: 341 T 341
>gi|183234221|ref|XP_651045.2| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|169801204|gb|EAL45659.2| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 694
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 228/396 (57%), Gaps = 27/396 (6%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++FP I + LN+ IT +T +Q+ +I L G D++ ++TGSGKTLA+ IP+I
Sbjct: 91 FDQFP-ISKATIQLLNKNRFIT-MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLI 148
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSE 510
+ + R + + DG+ ++I+ PTRELA Q ++F + + FT + +TGG+ K E
Sbjct: 149 EFM--YRSRWTELDGLCSIILSPTRELAQQIFDVFASIAGERFT---AALITGGKDTK-E 202
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+A++ + +++L+ TPGRLL H +T + + L+LDEADRILD G+++D+ LE L
Sbjct: 203 EAKVIRLMNVLICTPGRLLYHLDNTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHL 262
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
KQ+ Q++L SAT T +VQ L ++L++P I + D H T P++L Q ++
Sbjct: 263 PKQR---QTMLFSATQTKSVQDLIRLSLRHPEYI-SVDEKAQHAT------PETLNQTYM 312
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ ++ L SFI SKM+VF T + E L + L
Sbjct: 313 LLGDGDKINVLFSFIRTHTN-------SKMIVFFQTTKEVRFFFETFKK-LRVGAVLYLL 364
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
+G SQ+ R E TF K G+L CTD+A+RGLD+ VDWIVQY P + Y+HRVGR
Sbjct: 365 YGRQSQNSRNEQLSTFTKEKRGILFCTDIASRGLDIQGVDWIVQYDCPEDTAQYIHRVGR 424
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
TAR+ H G +LL L +E +E+L+ ++ + ++
Sbjct: 425 TARINHNGQALLLLTHNEEAFIEQLEKAKVPLNRVE 460
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 114/176 (64%), Gaps = 10/176 (5%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ + R + + DG+ ++I+ P
Sbjct: 112 MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIEFM--YRSRWTELDGLCSIILSP 169
Query: 66 TRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
TRELA Q ++F + + FT + +TGG+ K E+A++ + +++L+ TPGRLL H
Sbjct: 170 TRELAQQIFDVFASIAGERFT---AALITGGKDTK-EEAKVIRLMNVLICTPGRLLYHLD 225
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+T + + L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +
Sbjct: 226 NTPHFNTTPLRMLILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKS 278
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +VQ L ++L++P I
Sbjct: 238 LILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKSVQDLIRLSLRHPEYI- 293
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ D H T P++L Q +++ ++ L SFI SKM+VF
Sbjct: 294 SVDEKAQHAT------PETLNQTYMLLGDGDKINVLFSFIRTHTN-------SKMIVFFQ 340
Query: 318 T 318
T
Sbjct: 341 T 341
>gi|431912138|gb|ELK14276.1| ATP-dependent RNA helicase DDX55 [Pteropus alecto]
Length = 596
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 258/504 (51%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L + + +T VQ +I L DV + TGSGKTLA+ IP
Sbjct: 8 SWETLPVPLHPRVLGVLRD-LGFPYMTPVQSAAIPLFLKNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + + F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTRPFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ AR ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVARFKQQGGNIVVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++T P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVESLVRAGLRNPVRVSVREKGVAASSTQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ + Q K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFLRNRKQE-------KHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+HG M + +R ++F FR ++SG+L+CTDV ARG+D+P VDW+ QY PS+++
Sbjct: 293 GTEVMCIHGKM-KYKRDKIFTGFRGLQSGILVCTDVMARGIDIPEVDWVSQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E V L N++ ++E+ L+ ++L
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYVNFLAINQKCPLQEMSLQKSTADVLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+ A A + FE + + + S V+ YA + L IF K
Sbjct: 406 -------RLRAMALADRAVFEKGM-----------RAFVSHVQAYAKHECSL--IFRLKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 LDFAALARGFALLRMPKMPELRGK 469
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 143/330 (43%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I L DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFPYMTPVQSAAIPLFLKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ + + F GG + AR ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTRPFPQFSQILWIGGRNPGEDVARFKQQGGNIVVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L
Sbjct: 146 EDMFRR-------KAEGLDL---------------------------------------- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP+++ + ++T P L+ +++V + L F+
Sbjct: 207 QEVESLVRAGLRNPVRVSVREKGVAASSTQK--TPSRLENYYMVCKADEKFNQLVHFLRN 264
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
+ Q K LVF +T +Y+ + L
Sbjct: 265 RKQE-------KHLVFFSTCACVEYYGKAL 287
>gi|85085468|ref|XP_957516.1| hypothetical protein NCU04439 [Neurospora crassa OR74A]
gi|74696212|sp|Q7RZ35.1|DBP4_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-4
gi|28918608|gb|EAA28280.1| hypothetical protein NCU04439 [Neurospora crassa OR74A]
gi|40882181|emb|CAF06007.1| probable putative RNA helicase HCA4 [Neurospora crassa]
Length = 823
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 250/486 (51%), Gaps = 50/486 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 80 LTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKL--YRARWTEYDGLGALIISP 137
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 138 TRELAVQIFEVLRKIGRNHSFSA-GLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 195
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT + V LA
Sbjct: 196 TAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSATQSKRVSDLA 252
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H S P L+QH+IVTP +L L F+ +
Sbjct: 253 RLSLKDP------EYVSVHEAAAS-ATPVGLQQHYIVTPLPEKLDTLWGFLRTNLK---- 301
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VFM++ + E + I LHG Q R E+ F S K L
Sbjct: 302 ---SKIIVFMSSGKQVRFVYESFKR-MQPGIPLLHLHGRQKQIARLEITNRFTSAKYSCL 357
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + ++
Sbjct: 358 FATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAVLFLDPSEEEGFLK 417
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+++++ ++++ E +++ +S Q L
Sbjct: 418 RLEHKKVTVQKVN-----------------------VKENKKKSIKNELQSQCFQSPDLK 454
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S+VR + Y + + +F F ++ L FA S L P + G+ K L
Sbjct: 455 YLGQKAFVSYVR--SIYLQKDKEVFKFDKLDLDGFASSLGLPGTPQIRYQKGEDVKK--L 510
Query: 894 KNKKMA 899
KN A
Sbjct: 511 KNASRA 516
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 80 LTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKL--YRARWTEYDGLGALIISP 137
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 138 TRELAVQIFEVLRKIGRNHSFSA-GLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 195
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT
Sbjct: 196 TAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSAT 243
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT + V L
Sbjct: 195 QTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSATQSKRVSDL 251
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + +H S P L+QH+IVTP +L L F+ +
Sbjct: 252 ARLSLKDP------EYVSVHEAAAS-ATPVGLQQHYIVTPLPEKLDTLWGFLRTNLK--- 301
Query: 306 EDEESKMLVFMAT 318
SK++VFM++
Sbjct: 302 ----SKIIVFMSS 310
>gi|328856886|gb|EGG06005.1| hypothetical protein MELLADRAFT_36393 [Melampsora larici-populina
98AG31]
Length = 668
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 243/474 (51%), Gaps = 44/474 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+ T++T +Q LS+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+
Sbjct: 15 QAAKYTKLTPIQALSLPRALMGKDVLGAARTGSGKTLAFLIPVLEML--YRSKWGHMDGL 72
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A++I PTRELA+Q E+ + K F + GG+ ++ E+ R+ K ++IL+ATPGR
Sbjct: 73 GALVISPTRELAVQIFEVLRSIGK-FHSFSAGLVIGGKSLEDERERLSK-MNILIATPGR 130
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
L H + T ++ LVLDEADRILD G+ I + L + Q++L SAT T
Sbjct: 131 LQQHLEQTTGFDCDNLQVLVLDEADRILDMGFSNSINAIISSLPASR---QTLLFSATQT 187
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
+V+ LA ++L + AA T + L P L Q ++V + ++ L +F+
Sbjct: 188 KSVKDLARLSLSEDPEYVAARETGVDR---DLTTPKELHQSYMVIDLQSKMDYLWTFLKT 244
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+N KM+VF+++ + E + + LHG Q++R E+++ F
Sbjct: 245 HLKN-------KMIVFLSSCKQVRFVYETFRH-MRPGMPLLHLHGKQKQTKRLEIYERFS 296
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
S L TD+AARGLD P +DW+VQ P YVHRVGRTAR G +L+FL+PS
Sbjct: 297 SSPEACLFATDIAARGLDFPSIDWVVQADCPEDLDTYVHRVGRTARYQSGGKALIFLLPS 356
Query: 768 EVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E + +V + + R I ++++K D + + K++ + + D
Sbjct: 357 EEEGMVSKWEERGIEVKKVKPNDSRKQTIQHKLQAQMFKFPD------------------ 398
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + + S+VR + Y + + IF Q+ L FA+S L AP V
Sbjct: 399 -----IKFLGQRAFISYVR--SIYLQRNKKIFKLDQLDLTAFAESLGLPGAPQV 445
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 105/175 (60%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T++T +Q LS+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A++I
Sbjct: 20 TKLTPIQALSLPRALMGKDVLGAARTGSGKTLAFLIPVLEML--YRSKWGHMDGLGALVI 77
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+Q E+ + K F + GG+ ++ E+ R+ K ++IL+ATPGRL H
Sbjct: 78 SPTRELAVQIFEVLRSIGK-FHSFSAGLVIGGKSLEDERERLSK-MNILIATPGRLQQHL 135
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ T ++ LVLDEADRILD G+ I + L + Q++L SAT T
Sbjct: 136 EQTTGFDCDNLQVLVLDEADRILDMGFSNSINAIISSLPASR---QTLLFSATQT 187
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G+ I + L + Q++L SAT T +V+ LA ++L +
Sbjct: 149 LVLDEADRILDMGFSNSINAIISSLPASR---QTLLFSATQTKSVKDLARLSLSEDPEYV 205
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
AA T + L P L Q ++V + ++ L +F+ +N KM+VF++
Sbjct: 206 AARETGVDR---DLTTPKELHQSYMVIDLQSKMDYLWTFLKTHLKN-------KMIVFLS 255
Query: 318 T 318
+
Sbjct: 256 S 256
>gi|156386665|ref|XP_001634032.1| predicted protein [Nematostella vectensis]
gi|156221110|gb|EDO41969.1| predicted protein [Nematostella vectensis]
Length = 643
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 252/484 (52%), Gaps = 50/484 (10%)
Query: 400 PFMKKNLNEGMNITQVT--TVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
P K+ L+ M VT +Q+ I L G DVL ++TGSGKTLA+ IPII+ L
Sbjct: 56 PISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETL--W 113
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
R K + DG+ A++I PTRELA QT E+ K+ + + GG+ +K+E+ RI K
Sbjct: 114 RQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHD-LSAGLIIGGKDLKNEQKRIMK- 171
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
+I+V TPGRLL H T + ++ LVLDEADRILD G+ + +E L ++
Sbjct: 172 TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSER--- 228
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLR 637
Q++L SAT T +V+ LA ++LQ P I A + +D P+ L Q ++V +
Sbjct: 229 QTLLYSATQTRSVKDLARLSLQEPTYISAHEKSDTST-------PNRLTQSYVVCELPDK 281
Query: 638 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQS 697
L L SFI + SK+LVF+++ + E L I L+G Q
Sbjct: 282 LNFLFSFIRNHLK-------SKILVFVSSCKQVKFIYEGFRR-LQPGIPLMALYGKQKQL 333
Query: 698 ERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
+R ++ F VL TD+AARGLD P V+W++Q P + Y+HR GRTAR +
Sbjct: 334 KRVAIYDEFCKKTQCVLFATDIAARGLDFPAVNWVIQLDCPEDANTYIHRAGRTARYQKD 393
Query: 758 GSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
G SLL L+PSE + +++ L+++++ I EIK+ KM +
Sbjct: 394 GQSLLVLLPSEEQEMIKALKDKKVPINEIKVN-------PKKM----------------S 430
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
++Q ES + Q + L A K S+VR + + + + IF+ ++ + F+ S L +
Sbjct: 431 SIQSKLESFLAQDQELKHWAQKSIISYVR--SVFLQSNKKIFDTTKLPIKEFSVSLGLSN 488
Query: 877 APSV 880
AP +
Sbjct: 489 APRI 492
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ I L G DVL ++TGSGKTLA+ IPII+ L R K + DG+ A++I PT
Sbjct: 74 TDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIETL--WRQKWTSMDGLGALVISPT 131
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT E+ K+ + + GG+ +K+E+ RI K +I+V TPGRLL H T
Sbjct: 132 RELAYQTFEVLVKIGNKHD-LSAGLIIGGKDLKNEQKRIMK-TNIVVCTPGRLLQHMDET 189
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ ++ LVLDEADRILD G+ + +E L ++ Q++L SAT T
Sbjct: 190 PNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSER---QTLLYSATQT 238
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F + ++ LVLDEADRILD G+ + +E L ++ Q++L S
Sbjct: 178 TPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSER---QTLLYS 234
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++LQ P I A + +D P+ L Q ++V +L L S
Sbjct: 235 ATQTRSVKDLARLSLQEPTYISAHEKSDTST-------PNRLTQSYVVCELPDKLNFLFS 287
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK+LVF+++
Sbjct: 288 FIRNHLK-------SKILVFVSS 303
>gi|187608275|ref|NP_001120242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Xenopus (Silurana)
tropicalis]
gi|169642602|gb|AAI60434.1| ddx55 protein [Xenopus (Silurana) tropicalis]
Length = 594
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 274/548 (50%), Gaps = 76/548 (13%)
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
+++ L+E + T +T VQ +I ++ D+ + TGSGKTLA+ IP+++ L + K+
Sbjct: 20 IRQTLSE-LKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKL 78
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISI 520
+K+ + A+II PTRELA+Q E+ + K F L GG + + ++ G +I
Sbjct: 79 -KKNQVGAIIITPTRELAVQIDEVLSYFTKHFPQFSQILLIGGSNPVDDVMKFKEHGGNI 137
Query: 521 LVATPGRL----------LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+VATPGRL LD + +TL + L+LDEADR+LD G+E I L L
Sbjct: 138 IVATPGRLEDMFRRQADGLDLVSYVKTL-----DVLILDEADRLLDMGFEASINTILGFL 192
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
KQ+ ++ L SAT T ++ L L+NP++I + T P L+ +++
Sbjct: 193 PKQR---RTGLFSATQTQELENLVRAGLRNPVRIAVKEKGVAATCTQK--TPIRLQNYYM 247
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ + L +F+ + ++ K LVF +T +Y+ + L +L +N+ +
Sbjct: 248 ICKADEKFNKLVAFL-------QQRKQEKHLVFFSTCACVEYYGKALEALL-KNVKVMCI 299
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG M + +R +F FR + SG+L+CTDV ARG+D+P V+W+VQY PSS++ +VHR GR
Sbjct: 300 HGKM-KHKRNRIFTEFRKLNSGILVCTDVMARGIDIPEVNWVVQYDPPSSASAFVHRCGR 358
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
TAR+GH GS+L+FL+P E V + LS+ + L + +
Sbjct: 359 TARIGHHGSALVFLLPMEESYV--------------------SFLSINQKCPLQEMTE-- 396
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+A L +S + + K + S+V+ YA + +L IF K + + A+
Sbjct: 397 -LISAVDLLPKLKSMAESDRAVFEKGMKAFVSYVQAYAKHECNL--IFRVKDLDFSNLAR 453
Query: 871 SFALRDAPSVISGIG------------------KPKNKEELKNKKMAINKEK-SFKQRGN 911
F L P + G K KN+E+ + K + +EK + R N
Sbjct: 454 GFGLLRMPRMPELRGKNFSDFVSTTIDTDSIPYKDKNREKQRQKMLKERREKLESEGRRN 513
Query: 912 FSKKQMLS 919
F+K + S
Sbjct: 514 FAKNKAWS 521
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ +I ++ D+ + TGSGKTLA+ IP+++ L + K+ +K+ + A
Sbjct: 27 LKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ + K F L GG + + ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAVQIDEVLSYFTKHFPQFSQILLIGGSNPVDDVMKFKEHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + +AD + D+ +++ L
Sbjct: 146 ---------------EDMFRRQADGL-------DLVSYVKTL------------------ 165
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+ L+LDEADR+LD G+E I L L KQ+ ++ L SAT T
Sbjct: 166 ----------------DVLILDEADRLLDMGFEASINTILGFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
++ L L+NP++I + T P L+ ++++ + L +F+
Sbjct: 207 QELENLVRAGLRNPVRIAVKEKGVAATCTQK--TPIRLQNYYMICKADEKFNKLVAFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
+ ++ K LVF +T +Y+ + L
Sbjct: 263 -----QQRKQEKHLVFFSTCACVEYYGKAL 287
>gi|321473575|gb|EFX84542.1| hypothetical protein DAPPUDRAFT_223010 [Daphnia pulex]
Length = 869
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 257/489 (52%), Gaps = 61/489 (12%)
Query: 400 PFMKKNLNEGMNITQVTT---VQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ + TT VQ+ SI L G DVL ++TGSGKTLA+ IP++++L
Sbjct: 73 PLSKKTL-QGLQQNEYTTPTEVQKESIVLALRGLDVLGAAKTGSGKTLAFVIPVLERLYC 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
M + +R DG+ A+II PTRELA Q E F K+ + + GG+ + E+ R+ +
Sbjct: 132 M--QWTRLDGLGALIITPTRELAYQIFETFRKVGIQHDFSA-GLIIGGKDLNFERKRLDQ 188
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
+I++ TPGR+L H S ++ LV+DEADR LD G+++ + +E L P+
Sbjct: 189 -CNIMICTPGRVLHHMDENPLFDCSNLQILVIDEADRCLDLGFQQTMNGIIENLP---PK 244
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P+ + +H P+SL+Q +I+TP +
Sbjct: 245 RQTLLFSATQTKSVKDLARLSLKDPVYVS------VHENA-QYSTPESLRQSYIITPIQN 297
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K++VF+ + + + T L ++ L+G+M Q
Sbjct: 298 KVDILWSFL-------RSHRKKKLIVFLTSCKQVRFIHQAF-TRLRPGLSVLALYGTMHQ 349
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R V++ F ++ VL TD+AARGLD P VDW++Q P + Y+HR GRTAR
Sbjct: 350 MKRMSVYEEFCEKQTAVLFATDIAARGLDFPNVDWVIQMDCPDDPSSYIHRAGRTARYQK 409
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
G SLL L+PSE +VE+L ++I I++I++ + K+E L+R +VE
Sbjct: 410 GGESLLMLLPSEEAMVEQLAQKKIPIQKIEVNPSKLVSIQRKLEAMLAR----DVELKQM 465
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDL-----RHIFNFKQIHLGHFAKS 871
A R + +Y+K + + IF+ I L A+S
Sbjct: 466 AQ--------------------------RAFVTYAKSVFLMKDKSIFDVTSIDLNALARS 499
Query: 872 FALRDAPSV 880
L AP V
Sbjct: 500 LGLALAPRV 508
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T T VQ+ SI L G DVL ++TGSGKTLA+ IP++++L M + +R DG+ A+II
Sbjct: 88 TTPTEVQKESIVLALRGLDVLGAAKTGSGKTLAFVIPVLERLYCM--QWTRLDGLGALII 145
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA Q E F K+ + + GG+ + E+ R+ + +I++ TPGR+L H
Sbjct: 146 TPTRELAYQIFETFRKVGIQHDFSA-GLIIGGKDLNFERKRLDQ-CNIMICTPGRVLHHM 203
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
S ++ LV+DEADR LD G+++ + +E L P+ Q++L SAT T
Sbjct: 204 DENPLFDCSNLQILVIDEADRCLDLGFQQTMNGIIENL---PPKRQTLLFSATQT 255
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 17/126 (13%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
S ++ LV+DEADR LD G+++ + +E L P+ Q++L SAT T +V+ LA ++L++
Sbjct: 212 SNLQILVIDEADRCLDLGFQQTMNGIIENLP---PKRQTLLFSATQTKSVKDLARLSLKD 268
Query: 253 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKM 312
P+ + +H P+SL+Q +I+TP + ++ L SF+ + K+
Sbjct: 269 PVYV------SVHENA-QYSTPESLRQSYIITPIQNKVDILWSFL-------RSHRKKKL 314
Query: 313 LVFMAT 318
+VF+ +
Sbjct: 315 IVFLTS 320
>gi|86171847|ref|XP_966291.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
falciparum 3D7]
gi|46361260|emb|CAG25121.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
falciparum 3D7]
gi|223673362|gb|ACN12798.1| DEAD-box helicase 9 [Plasmodium falciparum]
Length = 601
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 260/499 (52%), Gaps = 55/499 (11%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
E ++ +EE I +KK L E +N +T +Q I L G D+L ++TGSGKT
Sbjct: 142 EHFYSELKFEEL-NICDALKKGLKE-LNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKT 199
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+ +P I L + K K+G +II PTREL LQ ++ LCK + + G
Sbjct: 200 LAFLVPSINILYNI--KFLPKNGTGVLIISPTRELCLQIYQVCKDLCK-YIPQTNGIIIG 256
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
G EK + GI+IL+ATPGRLLDH ++T+ + + L++DEADR+L G+E +I
Sbjct: 257 GMSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEI 316
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
++ L K++ Q+ L SAT T V+ L ++LQ PI I+ T + +
Sbjct: 317 NLIIKRLPKKR---QTALFSATQTTKVESLIRLSLQKPIFIEV---------TTKIATVE 364
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+Q + + R + L +F+ ++ K++VF ++ +LL+ +
Sbjct: 365 RLQQGYALVDEDKRFLLLFTFL-------KKNMSKKIMVFFNNCMSVQFYNDLLNYI--- 414
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+I + +HG Q++R + F F + K +L+CT+VAARGLD+P V++I+QY P S +
Sbjct: 415 DIPTYCIHGKKKQNKRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQYDPPDDSKE 474
Query: 744 YVHRVGRTARVGHE--GSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
Y+HRVGRT R G + GS+++FL+ E+K + L+ I I +
Sbjct: 475 YIHRVGRTCR-GQDSNGSAIIFLMKHELKFLNYLKFYNIPINQFAY-------------- 519
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
D ++L + +Q +S V + LH A + + S++ Y +Y+ L+ +F+
Sbjct: 520 DPNKLIN---------IQSHIQSIVTKNFHLHKMAREAFKSYLNGYITYA--LKDVFDVN 568
Query: 862 QIHLGHFAKSFALRDAPSV 880
++L +K+F L P V
Sbjct: 569 NLNLLLTSKNFGLEVPPKV 587
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N +T +Q I L G D+L ++TGSGKTLA+ +P I L + K K+G
Sbjct: 166 LNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVPSINILYNI--KFLPKNGTGV 223
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL LQ ++ LCK + + GG EK + GI+IL+ATPGRLL
Sbjct: 224 LIISPTRELCLQIYQVCKDLCK-YIPQTNGIIIGGMSRNEEKKKFIHGINILIATPGRLL 282
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + L++DEADR+L G+E +I ++ L K++ Q+ L SAT T
Sbjct: 283 DHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRLPKKR---QTALFSATQT 337
>gi|260820614|ref|XP_002605629.1| hypothetical protein BRAFLDRAFT_283402 [Branchiostoma floridae]
gi|229290964|gb|EEN61639.1| hypothetical protein BRAFLDRAFT_283402 [Branchiostoma floridae]
Length = 591
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 245/482 (50%), Gaps = 56/482 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ +T VQ I + DV + TGSGKTLA+ IPI++ LQ R + RK + A
Sbjct: 23 LGFQHMTPVQAACIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILQR-RTETLRKHEVGA 81
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE-KARIRKGISILVATPGRL 528
+II PTRELALQ E+ + K + L GG ++ K G +I+V TPGRL
Sbjct: 82 LIITPTRELALQIDEVISAFTKRLPQLSQLLLIGGGNPVADIKKYQENGANIIVCTPGRL 141
Query: 529 LDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
D + E +E LVLDEADR+LD G+E I L L KQ+ ++ L S
Sbjct: 142 EDILRRKEDGLNLAGHLKSLEVLVLDEADRLLDMGFEMSINTILSYLPKQR---RTGLFS 198
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T V+ L L+NP++I + N P SL +++ + L +
Sbjct: 199 ATQTKEVEALVRAGLRNPVRITVKEKNVAENVQQR--TPASLDNLYMMCRSDEKFNHLVA 256
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ + NE K +VF +T DY + L +L +N +HG M Q +R ++F
Sbjct: 257 FLRS---HGNE----KHMVFFSTCAGVDYFSSALRELL-KNTRVMSIHGKMKQ-KRNKIF 307
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
FR +SGVL+CTDV ARG+D+P V+W++Q+ PS+++ +VHR GRTAR+G EGS+++F
Sbjct: 308 AQFRQAESGVLVCTDVMARGVDIPEVNWVLQFDPPSNASAFVHRSGRTARMGREGSAVVF 367
Query: 764 LIPSEVKLVEELQ-NRRIRIEEIK----LKDCLQNLLSVKMEGDLSRLADGNVETAATAL 818
L+P E +E + N+++ + + + +KD L L +
Sbjct: 368 LLPEEDTYIEFIAINQKVTLTQYRPGYEVKDVLPKLRKM--------------------- 406
Query: 819 QMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
L+ + ++ A + + S+V+FY + L IF FK +H+ A+ F L P
Sbjct: 407 -------ALKDRAMYEKAMRAFVSFVQFYRKHECSL--IFRFKDLHIPSLARGFGLLKIP 457
Query: 879 SV 880
S+
Sbjct: 458 SM 459
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ I + DV + TGSGKTLA+ IPI++ LQ R + RK + A
Sbjct: 23 LGFQHMTPVQAACIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILQR-RTETLRKHEVGA 81
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE-KARIRKGISILVATPGRL 119
+II PTRELALQ E+ + K + L GG ++ K G +I+V TPGRL
Sbjct: 82 LIITPTRELALQIDEVISAFTKRLPQLSQLLLIGGGNPVADIKKYQENGANIIVCTPGRL 141
Query: 120 LDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
D + E +E LVLDEADR+LD G+E I L L KQ+ ++ L S
Sbjct: 142 EDILRRKEDGLNLAGHLKSLEVLVLDEADRLLDMGFEMSINTILSYLPKQR---RTGLFS 198
Query: 175 ATLT 178
AT T
Sbjct: 199 ATQT 202
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
+E LVLDEADR+LD G+E I L L KQ+ ++ L SAT T V+ L L+NP+
Sbjct: 161 LEVLVLDEADRLLDMGFEMSINTILSYLPKQR---RTGLFSATQTKEVEALVRAGLRNPV 217
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+I + N P SL +++ + L +F+ + NE K +V
Sbjct: 218 RITVKEKNVAENVQQR--TPASLDNLYMMCRSDEKFNHLVAFLRS---HGNE----KHMV 268
Query: 315 FMATQDMADYHTELL 329
F +T DY + L
Sbjct: 269 FFSTCAGVDYFSSAL 283
>gi|310796577|gb|EFQ32038.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 808
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 241/467 (51%), Gaps = 51/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q ++ L G D+L ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 76 LTDIQSRALPLALKGSDILGAAKTGSGKTLAFVIPVLEKL--YRARWTEYDGLGALIISP 133
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA Q E+ K+ ++ ++ + GG+ +K E R+ K ++ILV TPGR+L H
Sbjct: 134 TRELAAQIFEVLRKVGRNHSFSA-GLVIGGKSLKEEAERLSK-MNILVCTPGRMLQHLDQ 191
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G++ + +E L + Q++L SAT + + LA
Sbjct: 192 TAGFDVDNLQILVLDEADRIMDMGFQSAVDALVEHLPATR---QTLLFSATQSKKISDLA 248
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H + P +L+QH+I+TP +L L FI +
Sbjct: 249 RLSLRDP------EYVSVHEES----TPKNLQQHYILTPLHEKLDTLYGFIKANLR---- 294
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + L I L G Q +R E+ K F L
Sbjct: 295 ---SKIIVFFSSGKQVRFAYESMRH-LQPGIPLLHLLGKQKQLQRMEITKRFADANYSCL 350
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TDV ARG+D P VDW+VQ P + Y+HRVGRTAR +G ++LFL PS E +++
Sbjct: 351 FATDVVARGVDFPAVDWVVQVDCPEDADTYIHRVGRTARYERDGKAVLFLDPSEEAGMLK 410
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ I++I +K E +++ +S Q L
Sbjct: 411 RLEAKKVPIQKITVK-----------------------ENKKKSIKDQLQSMCFQNPDLK 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+VR + Y + + +F F ++ L +A S L AP +
Sbjct: 448 YLGQKAFISYVR--SVYLQKDKEVFKFDELDLDTYAASLGLPGAPQI 492
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 105/171 (61%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q ++ L G D+L ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 76 LTDIQSRALPLALKGSDILGAAKTGSGKTLAFVIPVLEKL--YRARWTEYDGLGALIISP 133
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q E+ K+ ++ ++ + GG+ +K E R+ K ++ILV TPGR+L H
Sbjct: 134 TRELAAQIFEVLRKVGRNHSFSA-GLVIGGKSLKEEAERLSK-MNILVCTPGRMLQHLDQ 191
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRI+D G++ + +E L + Q++L SAT
Sbjct: 192 TAGFDVDNLQILVLDEADRIMDMGFQSAVDALVEHLPATR---QTLLFSAT 239
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T ++ LVLDEADRI+D G++ + +E L + Q++L SAT + + L
Sbjct: 191 QTAGFDVDNLQILVLDEADRIMDMGFQSAVDALVEHLPATR---QTLLFSATQSKKISDL 247
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + +H + P +L+QH+I+TP +L L FI +
Sbjct: 248 ARLSLRDP------EYVSVHEES----TPKNLQQHYILTPLHEKLDTLYGFIKANLR--- 294
Query: 306 EDEESKMLVFMAT 318
SK++VF ++
Sbjct: 295 ----SKIIVFFSS 303
>gi|401424974|ref|XP_003876972.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493216|emb|CBZ28501.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 894
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 178/515 (34%), Positives = 258/515 (50%), Gaps = 64/515 (12%)
Query: 377 RRLKPVSEALFAPTSYE-------EFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
R L+ ++E+ A TS E E P I + L G + T +T +Q+ S+ L G
Sbjct: 55 RELEDIAESNEANTSTEHQYSKFTELP-ISQRTQMGLERG-HYTILTPIQKGSLHLALAG 112
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL + IP+++ L R S G+ A+++ PTRELALQ ++ +L
Sbjct: 113 FDVLGAAKTGSGKTLCFVIPVLECL--YREHWSSDMGVGALLLSPTRELALQIFKVM-QL 169
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
+ + LTGG ++ E+ R+ ISI+V TPGR+L H + L ++ +D
Sbjct: 170 VGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRILHHLQDDAELVLDNMQLFCMD 228
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS 609
EADR+LD G+ I L L PQ QS+L SAT T VQ LA M+L+NP +
Sbjct: 229 EADRLLDMGFREAITSILAYLP---PQRQSLLFSATQTTDVQMLAQMSLKNPRYVSMQAI 285
Query: 610 TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDM 669
T + P +L Q+F+V +L AL F+ K++VF++T +
Sbjct: 286 T-------AAPTPMTLCQNFVVVELHKKLDALLMFL-------KRHPNDKIVVFVSTCNQ 331
Query: 670 ADYHTELLSTVLGE-NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
+ S +L + I L M Q R EVF TF KS VL CTDVA+RGLD PL
Sbjct: 332 VKFMHLAFSKILKKMRIPSMCLTSKMKQFRREEVFLTFCRCKSAVLFCTDVASRGLDFPL 391
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK 788
V W+VQY P S+ Y+HR GRTAR G G SLLFL P E ++ L ++ + + EI +K
Sbjct: 392 VHWVVQYDCPDSAQTYIHRAGRTARAGARGVSLLFLTPRETPMLSYLHHKHVPLREIAIK 451
Query: 789 -DCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR-- 845
D L T+ F + V+Q L A K + +++R
Sbjct: 452 PDYL------------------------TSSHEIFVALVVQG--LKYEAQKAFIAYLRSV 485
Query: 846 FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
++AS +++F I + FAKS L P +
Sbjct: 486 YFASN----KNVFEVASIEVEAFAKSLGLPVVPDM 516
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 102/177 (57%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q+ S+ L G DVL ++TGSGKTL + IP+++ L R S G+ A+
Sbjct: 94 HYTILTPIQKGSLHLALAGFDVLGAAKTGSGKTLCFVIPVLECL--YREHWSSDMGVGAL 151
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
++ PTRELALQ ++ +L + + LTGG ++ E+ R+ ISI+V TPGR+L
Sbjct: 152 LLSPTRELALQIFKVM-QLVGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRILH 209
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H + L ++ +DEADR+LD G+ I L L PQ QS+L SAT T
Sbjct: 210 HLQDDAELVLDNMQLFCMDEADRLLDMGFREAITSILAYL---PPQRQSLLFSATQT 263
>gi|395513838|ref|XP_003761129.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Sarcophilus harrisii]
Length = 679
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 254/496 (51%), Gaps = 53/496 (10%)
Query: 400 PFMKKNLN---EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P + N++ + + +T +Q +I + DV + TGSGKTLA+ IPI+Q L
Sbjct: 96 PILASNISFALRALGFSYLTFLQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILQILLR 155
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR- 515
K+ +K + A+II PTRELA+Q E+ K F L GG + R +
Sbjct: 156 REEKL-KKMQVGAIIITPTRELAIQISEVLLHFSKHFPQFSQILLIGGRNPGEDVERFKE 214
Query: 516 KGISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEIL 570
+G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I LE L
Sbjct: 215 QGGNIIVATPGRLEDMFRRKAEGLDLANCVKSLDVLVLDEADRLLDMGFEASINTILEFL 274
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
KQ+ ++ L SAT T V+ L L+NP++I + +T P L+ +++
Sbjct: 275 PKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATSTQK--TPSRLENYYM 329
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
V + L F+ +E K LVF +T +Y+ + L ++ +N+ +
Sbjct: 330 VCKADEKFNQLVHFL-------RNHKEEKHLVFFSTCACVEYYGKALEALV-KNVKILCI 381
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GR
Sbjct: 382 HGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGR 440
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
TAR+G GS+L+FL+P E V L I +E+K + +LL
Sbjct: 441 TARIGRAGSALVFLLPMEESYVNFLS---INQKEMKPQKNPADLLP-------------Q 484
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+++ A A + FE + K + S V+ YA + +L IF K + A+
Sbjct: 485 LKSMALADRAVFEKGM-----------KAFVSCVQAYAKHECNL--IFRLKDLDFASLAR 531
Query: 871 SFALRDAPSVISGIGK 886
FAL P + GK
Sbjct: 532 GFALLRMPRMPELKGK 547
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 143/332 (43%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + +T +Q +I + DV + TGSGKTLA+ IPI+Q L K+ +K + A
Sbjct: 109 LGFSYLTFLQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILQILLRREEKL-KKMQVGA 167
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ K F L GG + R + +G +I+VATPGR
Sbjct: 168 IIITPTRELAIQISEVLLHFSKHFPQFSQILLIGGRNPGEDVERFKEQGGNIIVATPGR- 226
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
L+ + R AE L++
Sbjct: 227 --------------------------LEDMFRRK-AEGLDL------------------- 240
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A C ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 241 ANC---------VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 288
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + +T P L+ +++V + L F+
Sbjct: 289 QEVENLVRAGLRNPVRISVKEKGVAATSTQK--TPSRLENYYMVCKADEKFNQLVHFL-- 344
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+E K LVF +T +Y+ + L
Sbjct: 345 -----RNHKEEKHLVFFSTCACVEYYGKALEA 371
>gi|414876216|tpg|DAA53347.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 641
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 254/495 (51%), Gaps = 51/495 (10%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
P + P + + L+ G + T VQ +I +L DV V + TGSGKTLA+ +P+++ L+
Sbjct: 25 PALSPEVVEALDRG-GFQRCTPVQAAAIPHLLSHKDVAVDAATGSGKTLAFIVPVVEILR 83
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
R + + A+II PTREL+ Q + + + L GG +K+E ++
Sbjct: 84 R-RSSPPKSHEVLALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVE 142
Query: 516 K-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK 574
+ G +ILV TPG+L D HT+ L++ +E L+LDEADR+LD G+++ I L +L K +
Sbjct: 143 EEGANILVGTPGKLFD-IMHTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLR 201
Query: 575 PQFQSILLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTDSL---VIPDSLKQH 628
++ L SAT T AV L+ L+NPI+++ A ST L + P L+
Sbjct: 202 ---RTGLFSATQTKAVADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSITPLGLRLE 258
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHT---ELLSTVLGENI 685
+++ + L F++ QN + K++V+ AT DY L+ ++ G I
Sbjct: 259 YMICEASKKSSQLVDFLV---QNSGK----KIMVYFATCACVDYWAVVLPLIKSLKGSPI 311
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
+ HG M QS R + +F ++ SGVL+CTDVAARGLD+P VD IVQY P ++
Sbjct: 312 IAY--HGKMKQSLREKALASFSALSSGVLVCTDVAARGLDIPSVDLIVQYDPPQDPNVFI 369
Query: 746 HRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
HR GRTAR EG +++FL+P E VE L+ R + + E ++CL N V +
Sbjct: 370 HRAGRTARYDQEGDAIVFLLPKEDTYVEFLKLRGVPLTE---RECLANTDDVIPQ----- 421
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
SA L+ + + + + S+VR Y + +IF +K + +
Sbjct: 422 ----------------IRSAALEDRNVMEKGLRAFVSFVRAYKEHH--CSYIFRWKDLEI 463
Query: 866 GHFAKSFALRDAPSV 880
G A + L PS+
Sbjct: 464 GKLAMEYGLLQIPSM 478
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 6/179 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
+ T VQ +I +L DV V + TGSGKTLA+ +P+++ L+ R + + A+II
Sbjct: 42 RCTPVQAAAIPHLLSHKDVAVDAATGSGKTLAFIVPVVEILRR-RSSPPKSHEVLALIIS 100
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHC 123
PTREL+ Q + + + L GG +K+E ++ + G +ILV TPG+L D
Sbjct: 101 PTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPGKLFD-I 159
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
HT+ L++ +E L+LDEADR+LD G+++ I L +L K + ++ L SAT T A
Sbjct: 160 MHTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLR---RTGLFSATQTKAVA 215
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 20/183 (10%)
Query: 161 LKKQKPQFQSILLSATLTPATCW-CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 219
LKK + + +IL+ TP + HT+ L++ +E L+LDEADR+LD G+++ I L
Sbjct: 138 LKKVEEEGANILVG---TPGKLFDIMHTDALEYKNLEILILDEADRLLDMGFQKHINFIL 194
Query: 220 EILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTDSL---VI 273
+L K + ++ L SAT T AV L+ L+NPI+++ A ST L +
Sbjct: 195 SMLPKLR---RTGLFSATQTKAVADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSIT 251
Query: 274 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKK 333
P L+ +++ + L F++ QN + K++V+ AT DY +L K
Sbjct: 252 PLGLRLEYMICEASKKSSQLVDFLV---QNSGK----KIMVYFATCACVDYWAVVLPLIK 304
Query: 334 KIK 336
+K
Sbjct: 305 SLK 307
>gi|391338992|ref|XP_003743837.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Metaseiulus occidentalis]
Length = 853
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/479 (32%), Positives = 255/479 (53%), Gaps = 49/479 (10%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
K L+ G + T +Q+ ++ L GGD+L ++TGSGKTLA+ +PI++ L R +
Sbjct: 78 KAGLDRG-GFVKPTRIQKETLGLALRGGDILGAAKTGSGKTLAFVVPILEIL--FREMWT 134
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
R DG+ A++I PTRELA Q E+ K+ + + GG ++ E+ R+ +G +I++
Sbjct: 135 RLDGLGALVITPTRELAYQIFEVLKKVGIRHDFSA-GLIIGGTEVGFERKRL-QGCNIII 192
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
TPGRLL H + + ++ LVLDEADRILD G++RD+ LE L + Q++L
Sbjct: 193 CTPGRLLQHMDQNPLMDPTNLKILVLDEADRILDMGFQRDMNAILENLPSDR---QTLLF 249
Query: 583 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
SAT T +V+ LA ++L++P I +H + + P+ L Q ++V +L L
Sbjct: 250 SATQTKSVKDLARLSLKDPSYIS------VHEKS-AKATPEDLHQDYLVCELHDKLSLLW 302
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SF+ + K++VFM+ + ++ + LHG+MSQ R +
Sbjct: 303 SFL-------KNHKSKKIIVFMSCCKQVQFINTIMRR-MRPGTTVLHLHGNMSQPRRMAI 354
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
+ TF S +S +L+ TD+AARGLD P VDW+VQ P + Y+HRVGRTAR G+ G +LL
Sbjct: 355 YDTFCSKQSAILLATDLAARGLDFPRVDWVVQLDCPEDTDTYIHRVGRTARFGNSGKALL 414
Query: 763 FLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L+P+E + +V++L+ + + IE+I + + R D +Q
Sbjct: 415 VLLPTEEESMVQQLEKKSVPIEKIDV--------------NPRRFYD---------VQRK 451
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E+ + L SA + + +++ Y KD + +F ++ L +A+S L P V
Sbjct: 452 IEAMCARDVELKASAQRCFVGYLK-YIFMQKD-KQVFRIDKLDLDLYARSLGLIVTPRV 508
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ ++ L GGD+L ++TGSGKTLA+ +PI++ L R +R DG+ A++I PT
Sbjct: 90 TRIQKETLGLALRGGDILGAAKTGSGKTLAFVVPILEIL--FREMWTRLDGLGALVITPT 147
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA Q E+ K+ + + GG ++ E+ R+ +G +I++ TPGRLL H
Sbjct: 148 RELAYQIFEVLKKVGIRHDFSA-GLIIGGTEVGFERKRL-QGCNIIICTPGRLLQHMDQN 205
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ + ++ LVLDEADRILD G++RD+ LE L + Q++L SAT T +
Sbjct: 206 PLMDPTNLKILVLDEADRILDMGFQRDMNAILENLPSDR---QTLLFSATQTKS 256
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 17/120 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G++RD+ LE L + Q++L SAT T +V+ LA ++L++P I
Sbjct: 216 LVLDEADRILDMGFQRDMNAILENLPSDR---QTLLFSATQTKSVKDLARLSLKDPSYI- 271
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+H + + P+ L Q ++V +L L SF+ + K++VFM+
Sbjct: 272 -----SVHEKS-AKATPEDLHQDYLVCELHDKLSLLWSFL-------KNHKSKKIIVFMS 318
>gi|380797487|gb|AFE70619.1| ATP-dependent RNA helicase DDX55, partial [Macaca mulatta]
Length = 571
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 251/479 (52%), Gaps = 48/479 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 3 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 61
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 533
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 62 TRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 121
Query: 534 H-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
E L + ++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 122 RKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQ 178
Query: 589 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ L L+NP+++ + + P L+ +++V + L F+
Sbjct: 179 EVENLVRAGLRNPVRVSVKEKGVAASGAQK--TPSRLENYYMVCKADEKFNQLVHFL--- 233
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ K LVF +T +Y+ + L ++ + + +HG M + +R ++F FR
Sbjct: 234 ----RNHKQEKHLVFFSTCACVEYYGKALEALV-KGVKIMCIHGKM-KYKRNKIFMEFRK 287
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
++SG+L+CTDV ARG+D+P V+W++QY PS+++ +VHR GRTAR+GH GS+L+FL+P E
Sbjct: 288 LQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPME 347
Query: 769 VKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
+ L N++ ++E+KL+ +LL +++ A A + FE +
Sbjct: 348 ESYINFLAINQKCPLQEMKLQRNTVDLLP-------------KLKSMALADRAVFEKGM- 393
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
K + S+V+ YA + +L IF K + A+ FAL P + GK
Sbjct: 394 ----------KAFVSYVQAYAKHECNL--IFRLKDLDFASLAQGFALLRMPKMPELRGK 440
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 137/327 (41%), Gaps = 70/327 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 3 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 61
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 62 TRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 121
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 122 R-------KAEGLDLASCVRSLDV------------------------------------ 138
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 139 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 182
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + + P L+ +++V + L F+
Sbjct: 183 LVRAGLRNPVRVSVKEKGVAASGAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 233
Query: 305 NEDEESKMLVFMATQDMADYHTELLST 331
++ K LVF +T +Y+ + L
Sbjct: 234 RNHKQEKHLVFFSTCACVEYYGKALEA 260
>gi|355752613|gb|EHH56733.1| hypothetical protein EGM_06198 [Macaca fascicularis]
Length = 872
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 254/484 (52%), Gaps = 51/484 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ + L G DVL ++TGSGKTLA+ +P+++ L
Sbjct: 75 PLSKKTL-KGLQEAQYRLVTEIQKQTTGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-- 131
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 132 YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-N 189
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+ILV TPGRLL H T + + ++ LVLDEADRILD G+ + +E L K++
Sbjct: 190 NINILVRTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR-- 247
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q++IV +
Sbjct: 248 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIVCELQQ 299
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ + K +VF ++ Y + L I+ LHG Q
Sbjct: 300 KISVLYSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCQ-LCPGISILALHGWQQQ 351
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+ EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+HR GRTAR
Sbjct: 352 MRKMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 757 EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT 816
+G +LL L+PSE +V++L +++ ++EIK+ + +L D
Sbjct: 412 DGEALLILLPSEKAMVQQLLQKKVPVKEIKI--------------NPEKLID-------- 449
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
+Q ES + Q + L + S++R + Y + +F+ ++ + +A S L
Sbjct: 450 -VQKKLESFLAQDQDLKERETGCFVSYIR--SVYLMKDKEVFDVSKLPIPEYALSLGLAV 506
Query: 877 APSV 880
AP +
Sbjct: 507 APRI 510
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ + L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTTGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDFSA-GLIIGGKDLKHEAERI-NNINILVRTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 208 TVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 257
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++IV + ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIVCELQQKISVLYS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|115704798|ref|XP_780056.2| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Strongylocentrotus purpuratus]
Length = 867
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 170/467 (36%), Positives = 251/467 (53%), Gaps = 50/467 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DVL ++TGSGKTLA+ IPI++ L R S DG+ A++I PT
Sbjct: 86 TEIQRGAIGLSLQGHDVLGAAKTGSGKTLAFLIPILECL--YRNSWSVPDGLGALVISPT 143
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA QT E+ K+ + + + GG+ +K+E RI K +++V TPGRLL H T
Sbjct: 144 RELAYQTFEVLCKVGANHDFSA-GLIIGGKDLKTEMERIPK-TNVVVCTPGRLLQHMDET 201
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
+ ++ LVLDEADRILD G++R I L+ L ++ Q++L SAT T +V+ LA
Sbjct: 202 ACFESLNLKILVLDEADRILDLGFQRTIDAILDHLPAER---QTLLFSATQTKSVRDLAR 258
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
++L P + A H+T P L+Q +IV + +L L SFI +
Sbjct: 259 LSLLEPKYV-AVHEHHTHST------PVQLEQSYIVCELEQKLDVLYSFIKAHMKQ---- 307
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
K LVFM++ Y E+L L ++ L+GSM Q R V++ F +S VL+
Sbjct: 308 ---KTLVFMSSCKQVKYTFEVLCK-LNPGVSVMALYGSMHQLRRMAVYEEFCVRESAVLL 363
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEE 774
TD+AARGLD P V+W+VQ P S+ Y+HRVGRTAR +G +LL L+PS E +V E
Sbjct: 364 ATDIAARGLDFPAVNWVVQLDCPEDSSTYIHRVGRTARYEKDGEALLVLLPSEEEAMVAE 423
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
++ RRI IE+I++ A++ +S Q L
Sbjct: 424 METRRIPIEKIEVN-----------------------PNKRFAIEKKLQSFCAQNLELKQ 460
Query: 835 SACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
SA + + ++++ Y +KD IF+ + L +FAK+ L AP V
Sbjct: 461 SAQRAFIAYLKSVYLMKNKD---IFHVHVLSLDNFAKALGLAVAPRV 504
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DVL ++TGSGKTLA+ IPI++ L R S DG+ A++I PT
Sbjct: 86 TEIQRGAIGLSLQGHDVLGAAKTGSGKTLAFLIPILECL--YRNSWSVPDGLGALVISPT 143
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT E+ K+ + + + GG+ +K+E RI K +++V TPGRLL H T
Sbjct: 144 RELAYQTFEVLCKVGANHDFSA-GLIIGGKDLKTEMERIPK-TNVVVCTPGRLLQHMDET 201
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ ++ LVLDEADRILD G++R I L+ L ++ Q++L SAT T
Sbjct: 202 ACFESLNLKILVLDEADRILDLGFQRTIDAILDHLPAER---QTLLFSATQT 250
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G++R I L+ L ++ Q++L SAT T +V+ LA ++L P +
Sbjct: 212 LVLDEADRILDLGFQRTIDAILDHLPAER---QTLLFSATQTKSVRDLARLSLLEPKYV- 267
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
A H+T P L+Q +IV + +L L SFI + K LVFM+
Sbjct: 268 AVHEHHTHST------PVQLEQSYIVCELEQKLDVLYSFIKAHMKQ-------KTLVFMS 314
Query: 318 TQDMADYHTELL 329
+ Y E+L
Sbjct: 315 SCKQVKYTFEVL 326
>gi|146345411|sp|Q8JHJ2.2|DDX55_DANRE RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
Length = 593
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 276/547 (50%), Gaps = 67/547 (12%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+H + + L E + T +T VQ I + DV + TGSGKTLA+ IP ++ L +
Sbjct: 16 LHDNILQTLKE-LGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-K 516
K+ +K + A+II PTRELA+Q E+ + + F L GG + +++ +
Sbjct: 75 EEKL-KKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQ 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I++ATPGRL D + + L + ++ LVLDEADR+LD G+E + L L
Sbjct: 134 GANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T +++L L+NP++I + ++ P L ++ +
Sbjct: 194 KQR---RTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQK--TPAKLSNYYTM 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ + L +F+ + + K LVF +T +Y + L VL +N++ +H
Sbjct: 249 CRAEEKFNTLVAFL-------RQHKHEKQLVFFSTCACVEYFGKALE-VLVKNVSIHCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR++KSG+L+CTDV ARG+D+P V+W++QY PSS++ +VHR GRT
Sbjct: 301 GKM-KHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD-LSRLADGN 810
AR+G++G++L+FL+P E V L I K LQ+ SVK D L +L
Sbjct: 360 ARIGNQGNALVFLLPMEESYVNFLS--------INQKCPLQSFSSVKDVVDVLPKL---- 407
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
++ L + + + + S+V+ YA + L IF K + A+
Sbjct: 408 ------------KAMALGDRAMFEKGMRAFVSYVQAYAKHECSL--IFRIKDLDFAALAR 453
Query: 871 SFALRDAPSVISGIGKP------------------KNKEELKNKKMAINKEKSFKQRGNF 912
FAL P + GK KN+E+ + K +A KEK R NF
Sbjct: 454 GFALLRLPKMPELRGKTFPDFKAEAIDTDTIRFKDKNREKQRQKWLAEQKEKEVPLRKNF 513
Query: 913 SKKQMLS 919
K + S
Sbjct: 514 IKNKAWS 520
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ I + DV + TGSGKTLA+ IP ++ L + K+ +K + A
Sbjct: 27 LGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ + + F L GG + +++ +G +I++ATPGRL
Sbjct: 86 LIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGRL 145
Query: 120 LDHCKH-TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
D + + L + ++ LVLDEADR+LD G+E + L L KQ+ ++ L S
Sbjct: 146 EDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQR---RTGLFS 202
Query: 175 ATLT 178
AT T
Sbjct: 203 ATQT 206
>gi|336471197|gb|EGO59358.1| hypothetical protein NEUTE1DRAFT_79371 [Neurospora tetrasperma FGSC
2508]
gi|350292283|gb|EGZ73478.1| ATP-dependent RNA helicase dbp-4 [Neurospora tetrasperma FGSC 2509]
Length = 823
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 249/486 (51%), Gaps = 50/486 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 80 LTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKL--YRARWTEYDGLGALIISP 137
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 138 TRELAVQIFEVLRKIGRNHSFSA-GLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 195
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT + V LA
Sbjct: 196 TAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSATQSKRVSDLA 252
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H S P L+QH+IVTP +L L F+ +
Sbjct: 253 RLSLKDP------EYVSVHEAAAS-ATPVGLQQHYIVTPLPEKLDTLWGFLRTNLK---- 301
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VFM++ + E + I LHG Q R E+ F S K L
Sbjct: 302 ---SKIIVFMSSGKQVRFAYESFKR-MQPGIPLLHLHGRQKQIARLEITNRFTSAKYSCL 357
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + ++
Sbjct: 358 FATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAVLFLDPSEEEGFLK 417
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+++++ ++++ E +++ +S Q L
Sbjct: 418 RLEHKKVTVQKVN-----------------------VKENKKKSIKNELQSQCFQSPDLK 454
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S VR + Y + + +F F ++ L FA S L P + G+ K L
Sbjct: 455 YLGQKAFVSHVR--SIYLQKDKEVFKFDKLDLDGFASSLGLPGTPQIRYQKGEDVKK--L 510
Query: 894 KNKKMA 899
KN A
Sbjct: 511 KNASRA 516
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 80 LTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKL--YRARWTEYDGLGALIISP 137
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 138 TRELAVQIFEVLRKIGRNHSFSA-GLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 195
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT
Sbjct: 196 TAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSAT 243
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T ++ LVLDEADRI+D G+++ + +E L K + Q++L SAT + V L
Sbjct: 195 QTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSR---QTLLFSATQSKRVSDL 251
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + +H S P L+QH+IVTP +L L F+ +
Sbjct: 252 ARLSLKDP------EYVSVHEAAAS-ATPVGLQQHYIVTPLPEKLDTLWGFLRTNLK--- 301
Query: 306 EDEESKMLVFMAT 318
SK++VFM++
Sbjct: 302 ----SKIIVFMSS 310
>gi|328771893|gb|EGF81932.1| hypothetical protein BATDEDRAFT_19098 [Batrachochytrium
dendrobatidis JAM81]
Length = 839
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 244/471 (51%), Gaps = 48/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N Q T +Q+ S+ L DVL ++TGSGKTLA+ +P+++ L R S+ DG+ AV
Sbjct: 81 NFVQFTEIQKASLPFALCSRDVLGAAKTGSGKTLAFILPVLEVL--YRESWSQMDGVGAV 138
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELALQ ++ K+ + + + L GG+ +KSE+ R+ + ++ILV TPGRLL
Sbjct: 139 IISPTRELALQIFDVLRKVGR-YHSLSAGLLIGGKDLKSEQDRVAR-MNILVCTPGRLLQ 196
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T ++ LVLDEADRILD G+E+ I + L K + Q++L SAT T +V
Sbjct: 197 HMDQTPEFICDNLKLLVLDEADRILDNGFEKTINAIIANLPKSR---QTLLFSATQTKSV 253
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++LQNP + +H+ + P +L Q ++V +L L SFI +
Sbjct: 254 RDLARLSLQNP------EYVAVHDNAEQ-STPKNLIQKYLVCTLDKKLDILFSFIKTHLK 306
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K+LVF+++ + E + + LHG Q++R +F+ + +
Sbjct: 307 Q-------KILVFLSSCKQVRFVFETFCK-MQPGMPLLCLHGKQKQAKRVAIFEQYCRKQ 358
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
L TD+AARGLD P VDW+VQ P + Y+HRVGRTAR G +LL L+PSE
Sbjct: 359 GACLFATDIAARGLDFPAVDWVVQVDCPEDAATYIHRVGRTARYESHGQALLLLLPSEKD 418
Query: 771 -LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++ L+ +++ I EIK+ + ++Q + Q
Sbjct: 419 AMLLSLEQKKVPITEIKVN-----------------------PSKTISIQSQLSALCTQS 455
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ K + ++R + Y + + IFN +Q+ + FA+S L AP +
Sbjct: 456 PDIKYLGQKAFICYLR--SIYLQANKSIFNVEQMPVDLFAESLGLPGAPKI 504
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 109/177 (61%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N Q T +Q+ S+ L DVL ++TGSGKTLA+ +P+++ L R S+ DG+ AV
Sbjct: 81 NFVQFTEIQKASLPFALCSRDVLGAAKTGSGKTLAFILPVLEVL--YRESWSQMDGVGAV 138
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELALQ ++ K+ + + + L GG+ +KSE+ R+ + ++ILV TPGRLL
Sbjct: 139 IISPTRELALQIFDVLRKVGR-YHSLSAGLLIGGKDLKSEQDRVAR-MNILVCTPGRLLQ 196
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T ++ LVLDEADRILD G+E+ I + L K + Q++L SAT T
Sbjct: 197 HMDQTPEFICDNLKLLVLDEADRILDNGFEKTINAIIANLPKSR---QTLLFSATQT 250
>gi|332025244|gb|EGI65418.1| Putative ATP-dependent RNA helicase DDX10 [Acromyrmex echinatior]
Length = 795
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 247/477 (51%), Gaps = 48/477 (10%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K+L E N ++T +Q+ SI L G D+L ++TGSGKTLA+ IPI++ L + +R
Sbjct: 53 KSLTEN-NYVEMTDIQKQSIGLALQGNDILGAAKTGSGKTLAFLIPILEIL--YCKQWTR 109
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ ++II PTRELA Q E K+ + + I + GG+ +K EK R+ + ++++
Sbjct: 110 LDGLGSLIITPTRELAYQIYETLRKVGQ-YHSISAGLIIGGKDLKFEKKRMDQ-CNVIIC 167
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLL H ++ LVLDEADR LD G+E+ + +E L P+ Q++L S
Sbjct: 168 TPGRLLQHMDENPLFNCVNMQILVLDEADRCLDMGFEKTMNSIIENLP---PKRQTLLFS 224
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T +V+ LA ++L++P+ + + + H T P+ L+Q +I+ + +L L S
Sbjct: 225 ATQTKSVKDLARLSLKDPLYVSVHEHS-AHTT------PEGLQQSYIICSLEDKLAMLWS 277
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + K++VF ++ Y E L I+ L+G++ Q R ++
Sbjct: 278 FIRNHVK-------QKIIVFFSSCKQVKYIYEAFCR-LRPGISLLALYGTLHQLRRMNIY 329
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
++F + VL TD+AARGLD P V+W+VQ P Y+HR GRTAR G SLL
Sbjct: 330 ESFCKKQHAVLFATDIAARGLDFPTVNWVVQMDCPEDVNAYIHRAGRTARFKSGGESLLV 389
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L+PSE ++E L+ R+I I IK+ K+E L+R
Sbjct: 390 LLPSEEMIIERLKQRKIPINMIKINPNKLQSPHRKLEALLARDV---------------- 433
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L +A + + S+++ + + + IFN ++ FAKS L P +
Sbjct: 434 -------TLKETAQRAFVSYIK--SVFLMKDKEIFNVHALNTDEFAKSLGLAIPPRI 481
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 107/179 (59%), Gaps = 7/179 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N ++T +Q+ SI L G D+L ++TGSGKTLA+ IPI++ L + +R DG+ ++
Sbjct: 59 NYVEMTDIQKQSIGLALQGNDILGAAKTGSGKTLAFLIPILEIL--YCKQWTRLDGLGSL 116
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA Q E K+ + + I + GG+ +K EK R+ + ++++ TPGRLL
Sbjct: 117 IITPTRELAYQIYETLRKVGQ-YHSISAGLIIGGKDLKFEKKRMDQ-CNVIICTPGRLLQ 174
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
H ++ LVLDEADR LD G+E+ + +E L P+ Q++L SAT T +
Sbjct: 175 HMDENPLFNCVNMQILVLDEADRCLDMGFEKTMNSIIENL---PPKRQTLLFSATQTKS 230
>gi|385305559|gb|EIF49524.1| nucleolar dead box rna helicase [Dekkera bruxellensis AWRI1499]
Length = 417
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 215/386 (55%), Gaps = 24/386 (6%)
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
M L E +T +Q+ +I L G D+L ++TGSGKTLA+ +PI+++L K
Sbjct: 54 MXXGLQES-GFIDITDIQREAIPICLKGQDILGAAKTGSGKTLAFLVPILERL--TYDKW 110
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
DG+ A+II PTRELA+QT E+ K+ K + + + GG+ K E+ RI + I+IL
Sbjct: 111 DEMDGVGALIISPTRELAVQTYEVLLKIGK-YCSLSAGLVIGGKDYKFERERIGR-INIL 168
Query: 522 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL 581
V TPGR+L H + +LK ++ LV DEADRILD G+++ I IL + P+ Q++L
Sbjct: 169 VGTPGRILQHMDESASLKLDNLQMLVFDEADRILDMGFKKTIDS---ILSELPPERQTML 225
Query: 582 LSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 641
SAT T +V+ LA ++L NP I ST N + + P+SL Q+++ T ++ L
Sbjct: 226 FSATQTKSVKDLARLSLVNPKYI----STSADNES---LTPESLDQYYVSTELYEKVDLL 278
Query: 642 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTE 701
SFI + SK+LVF ++ + E L I KLHG + R E
Sbjct: 279 WSFIKSHLK-------SKILVFFSSSKQVHFTYESFRK-LRPGIQLLKLHGRQKEKARLE 330
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
F L TDV ARGLD P VDW++Q P + YVHRVGR+AR G G S+
Sbjct: 331 TTXAFTHASHCCLFATDVVARGLDFPAVDWVIQVDCPEDAATYVHRVGRSARFGRSGKSM 390
Query: 762 LFLIPSEVK-LVEELQNRRIRIEEIK 786
L L+P+E + ++ L +RI ++++K
Sbjct: 391 LMLLPNEEEPYLQRLSTKRIEVKKLK 416
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 110/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D+L ++TGSGKTLA+ +PI+++L K DG+ A+II P
Sbjct: 66 ITDIQREAIPICLKGQDILGAAKTGSGKTLAFLVPILERL--TYDKWDEMDGVGALIISP 123
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+QT E+ K+ K + + + GG+ K E+ RI + I+ILV TPGR+L H
Sbjct: 124 TRELAVQTYEVLLKIGK-YCSLSAGLVIGGKDYKFERERIGR-INILVGTPGRILQHMDE 181
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ +LK ++ LV DEADRILD G+++ I IL + P+ Q++L SAT T
Sbjct: 182 SASLKLDNLQMLVFDEADRILDMGFKKTID---SILSELPPERQTMLFSATQT 231
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 17/141 (12%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
+ +LK ++ LV DEADRILD G+++ I IL + P+ Q++L SAT T +V+ LA
Sbjct: 182 SASLKLDNLQMLVFDEADRILDMGFKKTID---SILSELPPERQTMLFSATQTKSVKDLA 238
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 306
++L NP I ST N + + P+SL Q+++ T ++ L SFI +
Sbjct: 239 RLSLVNPKYI----STSADNES---LTPESLDQYYVSTELYEKVDLLWSFIKSHLK---- 287
Query: 307 DEESKMLVFMATQDMADYHTE 327
SK+LVF ++ + E
Sbjct: 288 ---SKILVFFSSSKQVHFTYE 305
>gi|27545209|ref|NP_775336.1| ATP-dependent RNA helicase DDX55 [Danio rerio]
gi|21105407|gb|AAM34647.1|AF506203_1 ATP-dependent RNA helicase [Danio rerio]
Length = 593
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 276/547 (50%), Gaps = 67/547 (12%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+H + + L E + T +T VQ I + DV + TGSGKTLA+ IP ++ L +
Sbjct: 16 LHDNILQTLKE-LGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-K 516
K+ +K + A+II PTRELA+Q E+ + + F L GG + +++ +
Sbjct: 75 EEKL-KKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQ 133
Query: 517 GISILVATPGRLLDHCKH-TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I++ATPGRL D + + L + ++ LVLDEADR+LD G+E + L L
Sbjct: 134 GANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T +++L L+NP++I + ++ P L ++ +
Sbjct: 194 KQR---RTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQK--TPAKLSNYYTM 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ + L +F+ + + K LVF +T +Y + L VL +N++ +H
Sbjct: 249 CRAEEKFNTLVAFL-------RQHKHEKQLVFFSTCACVEYFGKALE-VLVKNVSIHCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR++KSG+L+CTDV ARG+D+P V+W++QY PSS++ +VHR GRT
Sbjct: 301 GKM-KHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD-LSRLADGN 810
AR+G++G++L+FL+P E V L I K LQ+ SVK D L +L
Sbjct: 360 ARIGNQGNALVFLLPMEESYVNFLS--------INQKCPLQSFSSVKDVVDVLPKL---- 407
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
++ L + + + + S+V+ YA + L IF K + A+
Sbjct: 408 ------------KAMALGDRAMFEKGMRAFVSYVQAYAKHECSL--IFRIKDLDFAALAR 453
Query: 871 SFALRDAPSVISGIGKP------------------KNKEELKNKKMAINKEKSFKQRGNF 912
FAL P + GK KN+E+ + K +A KEK R NF
Sbjct: 454 GFALLRLPKMPELRGKTFPDFKAEAIDTDTIRFKDKNREKQRQKWLAEQKEKEVPLRKNF 513
Query: 913 SKKQMLS 919
K + S
Sbjct: 514 IKNKAWS 520
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ I + DV + TGSGKTLA+ IP ++ L + K+ +K + A
Sbjct: 27 LGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ + + F L GG + +++ +G +I++ATPGRL
Sbjct: 86 LIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGRL 145
Query: 120 LDHCKH-TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
D + + L + ++ LVLDEADR+LD G+E + L L KQ+ ++ L S
Sbjct: 146 EDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQR---RTGLFS 202
Query: 175 ATLT 178
AT T
Sbjct: 203 ATQT 206
>gi|146091969|ref|XP_001470172.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
gi|134084966|emb|CAM69364.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
Length = 900
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 225/420 (53%), Gaps = 31/420 (7%)
Query: 377 RRLKPVSEALFAPTSYE-------EFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
R L+ ++E+ A TS E E P I + L G + T +T +Q+ ++ L G
Sbjct: 49 RELEDIAESNEANTSTEHQYSKFTELP-ISQRTQMGLERG-HYTILTPIQKGTLHLALAG 106
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL + IP++++L R S G+ A+++ PTRELALQ ++ +L
Sbjct: 107 LDVLGAAKTGSGKTLCFVIPVLERL--YREHWSSDMGVGALLLSPTRELALQIFKVM-QL 163
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
+ + LTGG ++ E+ R+ ISI+V TPGR+L H + L ++ +D
Sbjct: 164 VGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRVLHHLQDDAELVLDNMQLFCMD 222
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS 609
EADR+LD G+ I L L PQ QS+L SAT T VQ LA M+L+NP +
Sbjct: 223 EADRLLDMGFREAITSILAYLP---PQRQSLLFSATQTTDVQMLAQMSLKNPRYVSTQAI 279
Query: 610 TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDM 669
T + P +L Q+F+V +L AL F+ K++VF++T +
Sbjct: 280 T-------AAPTPMTLCQNFVVVELHKKLDALLMFL-------KRHPNDKIVVFVSTCNQ 325
Query: 670 ADYHTELLSTVLGE-NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
+ S +L + I L M Q R EVF TF KS VL CTDVA+RGLD PL
Sbjct: 326 VKFMHLAFSKILKKMRIPSMCLTSKMKQFRREEVFLTFCRCKSAVLFCTDVASRGLDFPL 385
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK 788
V W+VQY P S+ Y+HR GRTAR G G SLLFL P E ++ L ++ + + EI +K
Sbjct: 386 VHWVVQYDCPESAQTYIHRAGRTARAGARGVSLLFLTPRETPMLSYLHHKHVPMREIAIK 445
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 103/177 (58%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q+ ++ L G DVL ++TGSGKTL + IP++++L R S G+ A+
Sbjct: 88 HYTILTPIQKGTLHLALAGLDVLGAAKTGSGKTLCFVIPVLERL--YREHWSSDMGVGAL 145
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
++ PTRELALQ ++ +L + + LTGG ++ E+ R+ ISI+V TPGR+L
Sbjct: 146 LLSPTRELALQIFKVM-QLVGYKHVLSAALLTGGRDVQEERKRLH-AISIIVGTPGRVLH 203
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H + L ++ +DEADR+LD G+ I L L PQ QS+L SAT T
Sbjct: 204 HLQDDAELVLDNMQLFCMDEADRLLDMGFREAITSILAYL---PPQRQSLLFSATQT 257
>gi|367033377|ref|XP_003665971.1| hypothetical protein MYCTH_2310255 [Myceliophthora thermophila ATCC
42464]
gi|347013243|gb|AEO60726.1| hypothetical protein MYCTH_2310255 [Myceliophthora thermophila ATCC
42464]
Length = 830
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 254/486 (52%), Gaps = 50/486 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL K + DG+ A+II P
Sbjct: 75 LTDIQRAAIPLALKGNDILGAAKTGSGKTLAFLVPVLEKL--YHAKWTEYDGLGALIISP 132
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 133 TRELAIQIFEVLRKIGRNH-YFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 190
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT + V LA
Sbjct: 191 TANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLLFSATQSKRVSDLA 247
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + A ++ P +L+Q ++VTP +L L F+ +
Sbjct: 248 RLSLKDPEYVSAHEAA-------PTATPTTLQQSYVVTPLAEKLDTLWGFLRSNLK---- 296
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF+++ + E + I LHG Q R E+ F S K L
Sbjct: 297 ---SKIIVFLSSGKQVRFVFESFKR-MQPGIPLLHLHGRQKQVARMEITSRFSSAKYACL 352
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDV ARG+D P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE + ++
Sbjct: 353 FATDVVARGVDFPAVDWVIQVDCPEDAETYIHRVGRTARYQSKGRAVLFLDPSEEEGFLK 412
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+++++ I+++ ++ + S+K E +S Q L
Sbjct: 413 RLEHKKVPIQKVNVRASKKK--SIKNE---------------------LQSNNFQSADLK 449
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S+VR + Y + + +F F ++ L +A+S L P + K ++ + L
Sbjct: 450 YLGQKAFISYVR--SIYLQKDKEVFKFDELDLDGYAESLGLPGTPQI--KFQKGEDVKRL 505
Query: 894 KNKKMA 899
KN+ A
Sbjct: 506 KNRPRA 511
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 107/171 (62%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL K + DG+ A+II P
Sbjct: 75 LTDIQRAAIPLALKGNDILGAAKTGSGKTLAFLVPVLEKL--YHAKWTEYDGLGALIISP 132
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 133 TRELAIQIFEVLRKIGRNH-YFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 190
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT
Sbjct: 191 TANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLLFSAT 238
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT + V L
Sbjct: 190 QTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLLFSATQSKRVSDL 246
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + A ++ P +L+Q ++VTP +L L F+ +
Sbjct: 247 ARLSLKDPEYVSAHEAA-------PTATPTTLQQSYVVTPLAEKLDTLWGFLRSNLK--- 296
Query: 306 EDEESKMLVFMAT 318
SK++VF+++
Sbjct: 297 ----SKIIVFLSS 305
>gi|66911756|gb|AAH97636.1| Ddx10 protein [Xenopus laevis]
Length = 717
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 246/466 (52%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 98 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 155
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 156 RELAYQTFEVLRKVGRNHEFSA-GLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 213
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
S + LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA
Sbjct: 214 SFFHASNLHMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSVKDLAR 270
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
++L++P + +H P +L+Q++IV + ++ L SFI +
Sbjct: 271 LSLKDPAYVW------VHEKA-KFSTPATLEQNYIVCELQQKINLLYSFIRNHLKK---- 319
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
K +VF ++ Y L I LHG Q++R EV+ F KS VL
Sbjct: 320 ---KSIVFFSSCKEVQYLFRAFCR-LRPGIPVLVLHGKQQQTKRMEVYNDFIRKKSAVLF 375
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEE 774
TD+AARGLD P V W++Q P + Y+HRVGRTAR G +LL L+PSEVK + ++
Sbjct: 376 ATDIAARGLDFPAVSWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMAKQ 435
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +++ I EIK+ + LL V Q E+ + Q++ L
Sbjct: 436 LEEKKVPINEIKINP--EKLLDV---------------------QGRLEAFLAQEQDLKE 472
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+A + + S++R + Y + +F+ ++ L +A+S L AP V
Sbjct: 473 TAQRCFVSYLR--SVYLMKNKEVFDVFKLPLTPYAQSLGLAVAPRV 516
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 110/200 (55%), Gaps = 22/200 (11%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 98 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 155
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 156 RELAYQTFEVLRKVGRNHEFSA-GLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 213
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT-------- 178
S + LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 214 SFFHASNLHMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSVKDLAR 270
Query: 179 -----PATCWCKHTETLKFS 193
PA W E KFS
Sbjct: 271 LSLKDPAYVWVH--EKAKFS 288
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
S + LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA ++L++
Sbjct: 219 SNLHMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSVKDLARLSLKD 275
Query: 253 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
P + +H P +L+Q++IV + ++ L SFI
Sbjct: 276 PAYV------WVHEKA-KFSTPATLEQNYIVCELQQKINLLYSFI 313
>gi|388583939|gb|EIM24240.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 795
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 268/550 (48%), Gaps = 66/550 (12%)
Query: 378 RLKPVSEALFAPTS-YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
+LK + L T+ + E P I KK L + ++T +Q + L G D++ +
Sbjct: 73 KLKALQGELNEKTNIFNELP-ISNQSKKGL-KANGFVKMTEIQSATTHLALKGKDLVGSA 130
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
+TGSGKTL+Y +P+++ L + K S DG+ A+++ PTRELALQ ++ + ++
Sbjct: 131 RTGSGKTLSYLVPMLESL--YKDKWSNTDGLGALVVAPTRELALQIFKVLHSIGNHHSFS 188
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
L GG+ ++ EK R+ + ++IL+ATPGRLL H T ++ L+LDEADRILD
Sbjct: 189 A-GLLIGGKNVQQEKTRLNR-MNILIATPGRLLQHMDETYGFNADNLKLLILDEADRILD 246
Query: 557 QGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP--IQIDAADSTDIHN 614
G+++ I LE L + Q++L SAT++P+V LA ++L NP +QI + D
Sbjct: 247 LGFQKTIQAILEQLPPTHTR-QNLLFSATISPSVASLAKLSLNNPSYVQIGGDNGED--- 302
Query: 615 TTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHT 674
P +L Q + V P +L L FI +N K+LVF ++ +
Sbjct: 303 -----PTPKNLAQFYSVIPLDRKLDVLFGFIKTHLKN-------KVLVFASSCKQVRHIY 350
Query: 675 ELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQ 734
E S L + LHG + Q++R F VL TD+AARGLD+P VDW+VQ
Sbjct: 351 ETFSH-LRPGTSLMHLHGKLKQTKRNATLTKFSQASHAVLFATDIAARGLDIPAVDWVVQ 409
Query: 735 YTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNL 794
P + Y+HRVGRTAR +GSSL+ + PSE R + +K+K L
Sbjct: 410 LDIPEDADTYIHRVGRTARYNSKGSSLMLVEPSE---------REGILNNLKIKHIEPKL 460
Query: 795 LSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDL 854
L +K E + + ++ Q + A K + S++R + Y +
Sbjct: 461 LKIK-------------EKLMQPISNALQAHAFQDTEIKYLAQKAFVSYIR--SVYLQKD 505
Query: 855 RHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSK 914
+ FN ++ + +A S L P V K MA K K+ K N +K
Sbjct: 506 KETFNVAKLPVEKYASSLGLPGVPKV---------------KFMAAEKAKARKNEKN-AK 549
Query: 915 KQMLSEFDSG 924
K+ SE + G
Sbjct: 550 KEESSEAEDG 559
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
++T +Q + L G D++ ++TGSGKTL+Y +P+++ L + K S DG+ A++
Sbjct: 106 FVKMTEIQSATTHLALKGKDLVGSARTGSGKTLSYLVPMLESL--YKDKWSNTDGLGALV 163
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
+ PTRELALQ ++ + ++ L GG+ ++ EK R+ + ++IL+ATPGRLL H
Sbjct: 164 VAPTRELALQIFKVLHSIGNHHSFSA-GLLIGGKNVQQEKTRLNR-MNILIATPGRLLQH 221
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
T ++ L+LDEADRILD G+++ I LE L + Q++L SAT++P+
Sbjct: 222 MDETYGFNADNLKLLILDEADRILDLGFQKTIQAILEQLPPTHTR-QNLLFSATISPSVA 280
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 115/264 (43%), Gaps = 48/264 (18%)
Query: 66 TRELALQTLEIF----TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
T LAL+ ++ T K+ +++VP E + +K G+ LV P R L
Sbjct: 116 TTHLALKGKDLVGSARTGSGKTLSYLVPML----ESLYKDKWSNTDGLGALVVAPTREL- 170
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL---T 178
L+ KV H + G + L I K Q ++ L + T
Sbjct: 171 ------ALQIFKVLHSI----------GNHHSFSAGLLIGGKNVQQEKTRLNRMNILIAT 214
Query: 179 PATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
P ET F+ ++ L+LDEADRILD G+++ I LE L + Q++L SA
Sbjct: 215 PGRLLQHMDETYGFNADNLKLLILDEADRILDLGFQKTIQAILEQLPPTHTR-QNLLFSA 273
Query: 237 TLTPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
T++P+V LA ++L NP +QI + D P +L Q + V P +L L
Sbjct: 274 TISPSVASLAKLSLNNPSYVQIGGDNGED--------PTPKNLAQFYSVIPLDRKLDVLF 325
Query: 295 SFILGKCQNVNEDEESKMLVFMAT 318
FI +N K+LVF ++
Sbjct: 326 GFIKTHLKN-------KVLVFASS 342
>gi|195144476|ref|XP_002013222.1| GL24012 [Drosophila persimilis]
gi|194102165|gb|EDW24208.1| GL24012 [Drosophila persimilis]
Length = 884
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 209/345 (60%), Gaps = 24/345 (6%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 241 MGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 298
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 299 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 357
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 358 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 414
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + D ++ T D L +Q +IV P + RL+ L +F+
Sbjct: 415 IEALSKLALKSEPIYVGVHDD-EVTATVDGL------EQGYIVCPSEKRLLVLFTFL--- 464
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 465 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 517
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR 753
++G+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR
Sbjct: 518 AETGILLCTDVAARGLDIPQVDWIVQYDPPDDPKEYIHRVGRTAR 562
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 241 MGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 298
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 299 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 357
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 358 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT 412
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 368 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 424
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + D ++ T D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 425 SEPIYVGVHDD-EVTATV------DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 470
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 471 KVMVFFSSCMSVKYHHELFN 490
>gi|452820881|gb|EME27918.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 675
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 216/378 (57%), Gaps = 26/378 (6%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
Q+T +Q+ ++ L G D+L ++TGSGKTL + +PI++ L M + DG+ A+II
Sbjct: 74 QLTAIQKKALPLGLRGNDILGAARTGSGKTLTFLVPILEHLWRM--DWTSWDGLGALIIS 131
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA+Q ++ K+ K+ + + GG+ + E+ RI + ++IL+ATPGRLL H
Sbjct: 132 PTRELAMQIFQVLRKVGKNHCFSA-GLVIGGKDFEEERERIGR-MNILIATPGRLLQHMD 189
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
+ S+++ LVLDEAD+ILD G++R I L L KQ+ Q++L SAT T +VQ L
Sbjct: 190 QSTDFDCSRLQILVLDEADQILDMGFQRTIDAILRNLPKQR---QTLLFSATQTRSVQAL 246
Query: 594 AGMTLQNPIQI-------DAADSTDIHNTT---DSLV-IPDSLKQHFIVTPPKLRLVALA 642
A ++L+ P + DS +I + +S V IP SLKQ + V +L L
Sbjct: 247 ARLSLEEPEYVAVYEKTPQEEDSKEIESEVGREESFVDIPLSLKQSYTVVQAPEKLNILW 306
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SFI + K++VF+A+ + E + + +HG M QS+R +
Sbjct: 307 SFIKSHIR-------CKIIVFLASCKQVRFVYEAFRR-MKPGLVLLHIHGRMKQSKRMIM 358
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
++ F L+ TDVAARGLD P VDW++Q PS YVHR+GRTAR+ G+SLL
Sbjct: 359 YQQFCGQSYACLLATDVAARGLDFPQVDWVIQLDCPSHVQSYVHRIGRTARMNRSGNSLL 418
Query: 763 FLIPSEVKLVEELQNRRI 780
FL+PSE +E L++ I
Sbjct: 419 FLLPSECVFLERLKSHHI 436
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q+T +Q+ ++ L G D+L ++TGSGKTL + +PI++ L M + DG+ A+II
Sbjct: 74 QLTAIQKKALPLGLRGNDILGAARTGSGKTLTFLVPILEHLWRM--DWTSWDGLGALIIS 131
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q ++ K+ K+ + + GG+ + E+ RI + ++IL+ATPGRLL H
Sbjct: 132 PTRELAMQIFQVLRKVGKNHCFSA-GLVIGGKDFEEERERIGR-MNILIATPGRLLQHMD 189
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ S+++ LVLDEAD+ILD G++R I L L KQ+ Q++L SAT T
Sbjct: 190 QSTDFDCSRLQILVLDEADQILDMGFQRTIDAILRNLPKQR---QTLLFSATQT 240
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 21/137 (15%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
S+++ LVLDEAD+ILD G++R I L L KQ+ Q++L SAT T +VQ LA ++L+
Sbjct: 197 SRLQILVLDEADQILDMGFQRTIDAILRNLPKQR---QTLLFSATQTRSVQALARLSLEE 253
Query: 253 PIQI-------DAADSTDIHNTT---DSLV-IPDSLKQHFIVTPPKLRLVALASFILGKC 301
P + DS +I + +S V IP SLKQ + V +L L SFI
Sbjct: 254 PEYVAVYEKTPQEEDSKEIESEVGREESFVDIPLSLKQSYTVVQAPEKLNILWSFIKSHI 313
Query: 302 QNVNEDEESKMLVFMAT 318
+ K++VF+A+
Sbjct: 314 R-------CKIIVFLAS 323
>gi|330947845|ref|XP_003306982.1| hypothetical protein PTT_20301 [Pyrenophora teres f. teres 0-1]
gi|311315216|gb|EFQ84920.1| hypothetical protein PTT_20301 [Pyrenophora teres f. teres 0-1]
Length = 808
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 213/389 (54%), Gaps = 29/389 (7%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ SI L G D+L ++TGSGKTL++ IP+++ L ++ I G+ A+I+ P
Sbjct: 72 MTDVQAKSIPLALQGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HIGPDAGLGALILSP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ K+ + L GG+ +K E+ + K ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLKDEREALTK-MNILVATPGRMLQHLSQ 189
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G++RD+ +E L K++ Q++L SAT + V LA
Sbjct: 190 TAAFSVDDLKILVLDEADRILDMGFQRDVDAIVEYLPKER---QTLLFSATQSKKVSDLA 246
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H D P L Q++I+ P + +L L SFI
Sbjct: 247 RLSLQDP------EYVSVH-AEDKSATPKGLTQNYIICPQEEKLDTLWSFI-------QA 292
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
++SK+L F ++ + E + I +HG Q R + F + K L
Sbjct: 293 SKKSKILCFFSSAKTVRFVYESFRH-MQPGIPLLHIHGRQKQGARLDTTAKFSAAKHSCL 351
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VD+++Q P Y+HRVGRTAR EG +LFL PSE + +++
Sbjct: 352 FATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEEGMLK 411
Query: 774 ELQNRRIRIEEIK--------LKDCLQNL 794
L+ +R+ +E I +KD LQN+
Sbjct: 412 RLEAKRVPVEAINVRQKKRQSIKDQLQNM 440
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 5/171 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ SI L G D+L ++TGSGKTL++ IP+++ L ++ I G+ A+I+ P
Sbjct: 72 MTDVQAKSIPLALQGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HIGPDAGLGALILSP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ + L GG+ +K E+ + K ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLKDEREALTK-MNILVATPGRMLQHLSQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRILD G++RD+ +E L K++ Q++L SAT
Sbjct: 190 TAAFSVDDLKILVLDEADRILDMGFQRDVDAIVEYLPKER---QTLLFSAT 237
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T FS ++ LVLDEADRILD G++RD+ +E L K++ Q++L S
Sbjct: 179 TPGRMLQHLSQTAAFSVDDLKILVLDEADRILDMGFQRDVDAIVEYLPKER---QTLLFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++LQ+P + +H D P L Q++I+ P + +L L S
Sbjct: 236 ATQSKKVSDLARLSLQDP------EYVSVH-AEDKSATPKGLTQNYIICPQEEKLDTLWS 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI ++SK+L F ++
Sbjct: 289 FI-------QASKKSKILCFFSS 304
>gi|52545831|emb|CAH56233.1| hypothetical protein [Homo sapiens]
Length = 532
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 262/504 (51%), Gaps = 55/504 (10%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L VL +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RSHKQEKHLVFFSTCACVEYYGKALE-VLVK 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+K + +LL
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRLKG 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ A+ FAL P + GK
Sbjct: 446 L-----ARGFALLRMPKMPELRGK 464
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 139/330 (42%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVRSLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 -----RSHKQEKHLVFFSTCACVEYYGKAL 287
>gi|410903956|ref|XP_003965459.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Takifugu
rubripes]
Length = 597
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 171/541 (31%), Positives = 271/541 (50%), Gaps = 72/541 (13%)
Query: 406 LNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 465
LNE + T +T VQ I + DV + TGSGKTLA+ IPII+ L + K+ +K
Sbjct: 24 LNE-LQFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKL-KKM 81
Query: 466 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVAT 524
+ A++I PTRELALQ E+ + + F L GG + + + +G +I++AT
Sbjct: 82 QVGALVITPTRELALQISEVMQQFIQRFPQFTQILLIGGSNPIEDVEKFKDQGANIVIAT 141
Query: 525 PGRLLDHCKH-TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 579
PGRL D K + L + +E LVLDEADR+LD G+E + L L KQ+ ++
Sbjct: 142 PGRLEDMFKRKADGLDLACLVKSLEVLVLDEADRLLDMGFEASLNAILGHLPKQR---RT 198
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
L SAT T +++L L+NP++I + + T P L ++ + + +
Sbjct: 199 GLFSATQTQELEKLVRAGLRNPVRIAVKEKGVAASATQK--TPSRLSNYYTICRSENKFN 256
Query: 640 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSER 699
L +F+ + + K LVF +T +Y L T++ + +HG M + +R
Sbjct: 257 NLVAFL-------RQHKHEKNLVFFSTCACVEYFGRALETLI-KKATVCCIHGKM-KDKR 307
Query: 700 TEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS 759
++F FR++KSG+L+CTDV ARG+D+P VDW++QY PSS++ +VHR GRTAR+G++G+
Sbjct: 308 NKIFADFRALKSGILVCTDVMARGIDIPDVDWVLQYDPPSSASAFVHRCGRTARIGNQGN 367
Query: 760 SLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN--VETAATA 817
+L+FL+P E V N LS+ + L ++ N V+
Sbjct: 368 ALVFLLPMEESYV--------------------NFLSINQKCPLQKMPPINDVVDVLPKV 407
Query: 818 LQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDA 877
MS L + + + + S+V+ YA + L IF K + G A++FAL
Sbjct: 408 KAMS-----LADRATFDRSMRAFVSYVQAYAKHECSL--IFRVKDLDFGSLARAFALLRL 460
Query: 878 PSVISGIGKP------------------KNKEELKNKKMAINKEKSFKQRGNFSKKQMLS 919
P + GK KN+E+ + K +A E K++ FSK + +
Sbjct: 461 PKMPELKGKTFPDFVETTVDTETIRYKDKNREKQRQKMLA---ELKTKEKIQFSKNHVKN 517
Query: 920 E 920
E
Sbjct: 518 E 518
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 143/332 (43%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ I + DV + TGSGKTLA+ IPII+ L + K+ +K + A
Sbjct: 27 LQFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
++I PTRELALQ E+ + + F L GG + + + +G +I++ATPGRL
Sbjct: 86 LVITPTRELALQISEVMQQFIQRFPQFTQILLIGGSNPIEDVEKFKDQGANIVIATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E + +AD + D+A
Sbjct: 146 ---------------EDMFKRKADGL-------DLA------------------------ 159
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
C K E L VLDEADR+LD G+E + L L KQ+ ++ L SAT T
Sbjct: 160 --CLVKSLEVL--------VLDEADRLLDMGFEASLNAILGHLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
+++L L+NP++I + + T P L ++ + + + L +F+
Sbjct: 207 QELEKLVRAGLRNPVRIAVKEKGVAASATQK--TPSRLSNYYTICRSENKFNNLVAFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+ + K LVF +T +Y L T
Sbjct: 263 -----RQHKHEKNLVFFSTCACVEYFGRALET 289
>gi|449279310|gb|EMC86945.1| ATP-dependent RNA helicase DDX55 [Columba livia]
Length = 597
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 264/504 (52%), Gaps = 50/504 (9%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P + P + + L E + ++T VQ +I ++ DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVALSPGVLRALRE-LGFARMTPVQSATIPLFMNNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F L GG
Sbjct: 67 ILEILLRREEKL-KKMQVGAIIITPTRELAIQIDEVLSHFTKHFPRFSQILLIGGRNPME 125
Query: 510 EKARIRK-GISILVATPGRLLD-HCKHTETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ + ++ G +I+VATPGRL D + + L + ++ LVLDEADR+LD G+E +
Sbjct: 126 DVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFEASL 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
L+ L KQ+ ++ L SAT T V+ L L+NP++I + +++ P
Sbjct: 186 NTILDFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVA--ASNAQKTPT 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ ++++ + L F+ + ++ K LVF +T +Y+ + L + + +
Sbjct: 241 RLENYYMICKADEKFNQLVHFL-------RQHKQEKHLVFFSTCACVEYYGKALESFI-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR + G+L+CTDV ARG+D+P V W++QY PSS++
Sbjct: 293 QVKIMSIHGKM-KHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGD 802
+VHR GRTAR+G+ GS+L+FL+P E V L N++ ++E+K + + +LL
Sbjct: 352 FVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVSDLLP------ 405
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
++ A A + FE + K + S+V+ YA + +L IF K
Sbjct: 406 -------KLKAMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL--IFRIKD 445
Query: 863 IHLGHFAKSFALRDAPSVISGIGK 886
+ AK FAL P + GK
Sbjct: 446 LDFASLAKGFALLKMPKMPELRGK 469
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 147/332 (44%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++T VQ +I ++ DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFARMTPVQSATIPLFMNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ + K F L GG + + ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E L +AD L
Sbjct: 146 ---------------EDLFRRKAD--------------------------------GLDL 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E + L+ L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFEASLNTILDFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + +++ P L+ ++++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVA--ASNAQKTPTRLENYYMICKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+ ++ K LVF +T +Y+ + L +
Sbjct: 263 -----RQHKQEKHLVFFSTCACVEYYGKALES 289
>gi|336367410|gb|EGN95755.1| hypothetical protein SERLA73DRAFT_186962 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380126|gb|EGO21280.1| hypothetical protein SERLADRAFT_476265 [Serpula lacrymans var.
lacrymans S7.9]
Length = 779
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 201/357 (56%), Gaps = 21/357 (5%)
Query: 412 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 471
++T +Q SI L G DVL ++TGSGKTLA+ IP ++ L R K +DG+ A+I
Sbjct: 54 FVEMTDIQAQSIPVALKGRDVLGAARTGSGKTLAFLIPTLEIL--YRKKWGPQDGLGALI 111
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
I PTRELA+Q E+ + + ++ + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 112 ISPTRELAVQIFEVLRSIGGNHSFSA-GLVIGGKNLKDERDRLSR-MNILVATPGRLLQH 169
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
T + ++ LVLDEADRILD G+ R ++ L L K + Q++L SAT T +V+
Sbjct: 170 MDQTFGFESDNLQVLVLDEADRILDMGFSRTLSALLSHLPKSR---QTLLFSATQTDSVK 226
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA ++L++P I + T + P SL+QH+IV +L L SFI +
Sbjct: 227 DLARLSLKDPASIG------VQETNNESATPKSLEQHYIVCELDKKLDILWSFIKSHLK- 279
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
+K+LVF+++ + E + + LHG Q+ R + F S
Sbjct: 280 ------AKILVFISSGKQVRFVFETFCK-MHPGVPLLHLHGKQKQTTRLATYTRFTSSSH 332
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
+L TD+AARGLD P VDW++Q AP + Y+HRVGRTAR G LLFL+PSE
Sbjct: 333 AILFATDIAARGLDFPSVDWVLQVDAPEDADTYIHRVGRTARYESAGKGLLFLLPSE 389
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
++T +Q SI L G DVL ++TGSGKTLA+ IP ++ L R K +DG+ A+I
Sbjct: 54 FVEMTDIQAQSIPVALKGRDVLGAARTGSGKTLAFLIPTLEIL--YRKKWGPQDGLGALI 111
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ + + ++ + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 112 ISPTRELAVQIFEVLRSIGGNHSFSA-GLVIGGKNLKDERDRLSR-MNILVATPGRLLQH 169
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ R ++ L L K + Q++L SAT T
Sbjct: 170 MDQTFGFESDNLQVLVLDEADRILDMGFSRTLSALLSHLPKSR---QTLLFSATQT 222
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++ LVLDEADRILD G+ R ++ L L K + Q++L S
Sbjct: 162 TPGRLLQHMDQTFGFESDNLQVLVLDEADRILDMGFSRTLSALLSHLPKSR---QTLLFS 218
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P I + T + P SL+QH+IV +L L S
Sbjct: 219 ATQTDSVKDLARLSLKDPASI------GVQETNNESATPKSLEQHYIVCELDKKLDILWS 272
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + +K+LVF+++
Sbjct: 273 FIKSHLK-------AKILVFISS 288
>gi|148222920|ref|NP_001089088.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Xenopus laevis]
gi|114107928|gb|AAI23292.1| Ddx10 protein [Xenopus laevis]
Length = 663
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/466 (34%), Positives = 246/466 (52%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 98 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 155
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 156 RELAYQTFEVLRKVGRNHEFSA-GLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 213
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
S + LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA
Sbjct: 214 SFFHASNLHMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSVKDLAR 270
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
++L++P + +H P +L+Q++IV + ++ L SFI +
Sbjct: 271 LSLKDP------EYVWVHEKA-KFSTPATLEQNYIVCELQQKINLLYSFIRNHLKK---- 319
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
K +VF ++ Y L I LHG Q++R EV+ F KS VL
Sbjct: 320 ---KSIVFFSSCKEVQYLFRAFCR-LRPGIPVLVLHGKQQQTKRMEVYNDFIRKKSAVLF 375
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEE 774
TD+AARGLD P V W++Q P + Y+HRVGRTAR G +LL L+PSEVK + ++
Sbjct: 376 ATDIAARGLDFPAVSWVLQLDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEVKGMAKQ 435
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +++ I EIK+ + LL V Q E+ + Q++ L
Sbjct: 436 LEEKKVPINEIKINP--EKLLDV---------------------QGRLEAFLAQEQDLKE 472
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+A + + S++R + Y + +F+ ++ L +A+S L AP V
Sbjct: 473 TAQRCFVSYLR--SVYLMKNKEVFDVFKLPLTPYAQSLGLAVAPRV 516
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DVL ++TGSGKTLA+ IP ++ L R + + DG+ +II PT
Sbjct: 98 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECL--YRQQWTSDDGLGVLIISPT 155
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT E+ K+ ++ + + GG+ +K E A I + +IL+ TPGRLL H T
Sbjct: 156 RELAYQTFEVLRKVGRNHEFSA-GLVIGGKDLKQETACIHR-TNILICTPGRLLQHMDET 213
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
S + LVLDEADRILD G+ + +E L K++ Q++L SAT T
Sbjct: 214 SFFHASNLHMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQT 262
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
S + LVLDEADRILD G+ + +E L K++ Q++L SAT T +V+ LA ++L++
Sbjct: 219 SNLHMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSVKDLARLSLKD 275
Query: 253 PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
P + +H P +L+Q++IV + ++ L SFI
Sbjct: 276 P------EYVWVHEKA-KFSTPATLEQNYIVCELQQKINLLYSFI 313
>gi|389634695|ref|XP_003715000.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae 70-15]
gi|152013483|sp|A4RGU2.1|DBP4_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP4
gi|351647333|gb|EHA55193.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae 70-15]
gi|440470545|gb|ELQ39612.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae Y34]
gi|440477824|gb|ELQ58804.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae P131]
Length = 798
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 256/500 (51%), Gaps = 55/500 (11%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
P ++ E P P K + + +T +Q +I L G D+L ++TGSGKTLA+ +
Sbjct: 48 PKAFAELPLSEPTAKGVRDS--HFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLV 105
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
P+++KL R + +++ + A+++ PTRELA+QT ++ K+ + + + GG+ ++
Sbjct: 106 PLLEKL--YREQWTQEAKLGALVLSPTRELAVQTFQVLRKIGRHHLFSA-GLVIGGKSVR 162
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E + + ++IL+ TPGR+L H T ++ LVLDEADRI+D G++RD+ ++
Sbjct: 163 EEAEALSR-MNILIGTPGRILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQ 221
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L + Q++L SAT + V LA ++L++P + S TT P +L+QH
Sbjct: 222 HLPTTR---QTLLFSATQSKKVSDLARLSLKDPEYV----SVHAEATT---ATPSTLQQH 271
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
+IVTP +L L FI + SKM+VF+++ + E + I
Sbjct: 272 YIVTPLPEKLDTLWGFIKANLK-------SKMVVFLSSGKQVRFVYESFRQ-MQPGIPLL 323
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
+HG Q R +V K F S K L TDV ARG+D VDW+VQ AP + DY+HRV
Sbjct: 324 HMHGRQKQLARLDVTKRFDSSKHACLFATDVIARGIDFTGVDWVVQVDAPEDTDDYIHRV 383
Query: 749 GRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
GRTAR EG +++FL PS E +++ L+ +++ I ++ KD +
Sbjct: 384 GRTARYEREGKAVIFLDPSEEAGMLKRLERKKVPITKVTAKDSKKK-------------- 429
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRH------IFNF 860
+++ +S + + A K + S+ R + + +D +H +F F
Sbjct: 430 ---------SIRDELQSICWKSHDVKYLAQKAFISYARAVHRATERDEKHNENSDQVFKF 480
Query: 861 KQIHLGHFAKSFALRDAPSV 880
++ L FAKS L AP +
Sbjct: 481 DKLDLEGFAKSMGLAGAPQI 500
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++KL R + +++ + A+++ P
Sbjct: 72 LTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEKL--YREQWTQEAKLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+QT ++ K+ + + + GG+ ++ E + + ++IL+ TPGR+L H
Sbjct: 130 TRELAVQTFQVLRKIGRHHLFSA-GLVIGGKSVREEAEALSR-MNILIGTPGRILQHLDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRI+D G++RD+ ++ L + Q++L SAT
Sbjct: 188 THGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPTTR---QTLLFSAT 235
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T ++ LVLDEADRI+D G++RD+ ++ L + Q++L SAT + V L
Sbjct: 187 QTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPTTR---QTLLFSATQSKKVSDL 243
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + S TT P +L+QH+IVTP +L L FI +
Sbjct: 244 ARLSLKDPEYV----SVHAEATT---ATPSTLQQHYIVTPLPEKLDTLWGFIKANLK--- 293
Query: 306 EDEESKMLVFMAT 318
SKM+VF+++
Sbjct: 294 ----SKMVVFLSS 302
>gi|384251385|gb|EIE24863.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 588
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 264/547 (48%), Gaps = 79/547 (14%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+ E P I P L+ + + T VQ+ +I DV V + TGSGKTLA+ IP+I
Sbjct: 7 FAEIPQISPDTLAVLDS-LGFERATPVQEATIPLFCGNKDVSVDACTGSGKTLAFLIPLI 65
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL+ + + +K I A+++ PTRELA Q + S + L GG ++
Sbjct: 66 EKLRRLEDPL-KKHQIGALVVSPTRELARQIHTVLEPFAASVPGLTTMLLVGGSDPIADV 124
Query: 512 ARIRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
A ++ G +LV TPGRL D + ++ L ++E LVLDEADR+LD GY + + + L
Sbjct: 125 AAFKEHGAHVLVGTPGRLHDVFERSDVLDARRLEVLVLDEADRLLDAGYGKHLEALMRRL 184
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT--------------- 615
KQ+ ++ L SAT T AV+ LA L+N ++++ A +
Sbjct: 185 PKQR---RTGLFSATQTEAVEALARAGLRNQVRVNVAVGPAASTSGRTAEEAAGEMKGKK 241
Query: 616 TDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 675
T+ V P L ++V +L L F+ E K++V+ T D+++
Sbjct: 242 TEQRVTPSGLHASYLVCQSDEKLAHLVHFL-------QAHTEEKIIVYFLTCAGVDFYSL 294
Query: 676 LL--STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIV 733
L + +G + LHG M QS+R +F + SGVL+CTDVAARGLD+P V WIV
Sbjct: 295 ALPAAAAVGPKLNLTALHGKMKQSQREAKLASFAANPSGVLLCTDVAARGLDIPDVAWIV 354
Query: 734 QYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQN 793
Q P +VHRVGRTAR+G G +L L+P E VE L+ R++ + E + + +
Sbjct: 355 QVDPPQDPDVFVHRVGRTARMGRSGRALTLLLPHEAAYVEFLRIRKVPMVEEQPAEGVPE 414
Query: 794 LLSVKMEGDLSRLA--DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYS 851
+LS + RLA D +V TA + S+VR Y +
Sbjct: 415 VLS-----RVRRLAETDRDVMEKGTA---------------------AFVSYVRGYREHQ 448
Query: 852 KDLRHIFNFKQIHLGHFAKSFALRDAPSV--ISGIG-----------------KPKNKEE 892
R IF + + LGH A +FAL P + + G+G K K++E+
Sbjct: 449 --CRFIFRSEGLDLGHLATAFALLRLPRMPELRGLGDLPYFTPSPVDPNTVKFKDKHREK 506
Query: 893 LKNKKMA 899
+ KK+A
Sbjct: 507 QRQKKLA 513
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 101/181 (55%), Gaps = 5/181 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + T VQ+ +I DV V + TGSGKTLA+ IP+I+KL+ + + +K I A
Sbjct: 24 LGFERATPVQEATIPLFCGNKDVSVDACTGSGKTLAFLIPLIEKLRRLEDPL-KKHQIGA 82
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+++ PTRELA Q + S + L GG ++ A ++ G +LV TPGRL
Sbjct: 83 LVVSPTRELARQIHTVLEPFAASVPGLTTMLLVGGSDPIADVAAFKEHGAHVLVGTPGRL 142
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + ++ L ++E LVLDEADR+LD GY + + + L KQ+ ++ L SAT T
Sbjct: 143 HDVFERSDVLDARRLEVLVLDEADRLLDAGYGKHLEALMRRLPKQR---RTGLFSATQTE 199
Query: 180 A 180
A
Sbjct: 200 A 200
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 25/157 (15%)
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
+ ++ L ++E LVLDEADR+LD GY + + + L KQ+ ++ L SAT T AV+
Sbjct: 147 ERSDVLDARRLEVLVLDEADRLLDAGYGKHLEALMRRLPKQR---RTGLFSATQTEAVEA 203
Query: 245 LAGMTLQNPIQIDAADSTDIHNT---------------TDSLVIPDSLKQHFIVTPPKLR 289
LA L+N ++++ A + T+ V P L ++V +
Sbjct: 204 LARAGLRNQVRVNVAVGPAASTSGRTAEEAAGEMKGKKTEQRVTPSGLHASYLVCQSDEK 263
Query: 290 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHT 326
L L F+ E K++V+ T D+++
Sbjct: 264 LAHLVHFL-------QAHTEEKIIVYFLTCAGVDFYS 293
>gi|308456140|ref|XP_003090535.1| hypothetical protein CRE_31571 [Caenorhabditis remanei]
gi|308262642|gb|EFP06595.1| hypothetical protein CRE_31571 [Caenorhabditis remanei]
Length = 745
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 253/496 (51%), Gaps = 62/496 (12%)
Query: 413 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T+ T +Q+ +I L G DV+ ++TGSGKTLA IPI++ L R + S + G+ A++I
Sbjct: 96 TKPTEIQRDTIAHSLSGADVVGAAKTGSGKTLALVIPILEAL--WRARWSPEYGLGALVI 153
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELALQT + K + + GG ++ EK RI GI+I+V TPGRLL H
Sbjct: 154 SPTRELALQTFSTINAVGKHHGFSC-GLVIGGSEVSYEKNRI-SGINIIVCTPGRLLQHM 211
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
E + ++ LVLDEADR+LD G+ + + + L ++ Q++L SAT T V+
Sbjct: 212 DENEQMNCDSLQILVLDEADRMLDMGFAKQLNSIVNNLPSER---QTLLFSATQTRNVKD 268
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
L + +P+ + +H S PD+LKQ +++ + ++ L SFI
Sbjct: 269 LCRVCTNDPVFVS------VHENA-SAATPDNLKQSYVIVEEESKINTLWSFIEAH---- 317
Query: 653 NEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSG 712
++ K L+F+++ A + TE+ S L + L G+M+Q +R E F F K+
Sbjct: 318 ---KKKKSLIFVSSCKQARFLTEVFSQ-LRPGLPVMGLWGTMNQKKRIETFTKFDEAKAA 373
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKL 771
VLI TDVA+RGLD +DW++Q P+ DY+HRVGR+AR+ G+SLL + S E +
Sbjct: 374 VLIATDVASRGLDFEHIDWVIQMDCPAQIDDYIHRVGRSARMDDSGNSLLMVTSSQESPM 433
Query: 772 VEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKI 831
+ +L+ I IEE+K+ A T +++ + + +
Sbjct: 434 IAKLEKHNIPIEELKIH-----------------------PDAVTDVRLKLRAMLAESPE 470
Query: 832 LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL--------------RDA 877
L A K +++R A ++ + +F+ I++ F+ SF L ++A
Sbjct: 471 LKEWAQKSIVAYLR--AVHTMRDKRVFDVNSINVAAFSDSFGLVSVPRLRFLKGQKTKEA 528
Query: 878 PSVISGIGKPKNKEEL 893
P V+ PK E L
Sbjct: 529 PEVVEDSEDPKTTESL 544
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T+ T +Q+ +I L G DV+ ++TGSGKTLA IPI++ L R + S + G+ A++I
Sbjct: 96 TKPTEIQRDTIAHSLSGADVVGAAKTGSGKTLALVIPILEAL--WRARWSPEYGLGALVI 153
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELALQT + K + + GG ++ EK RI GI+I+V TPGRLL H
Sbjct: 154 SPTRELALQTFSTINAVGKHHGFSC-GLVIGGSEVSYEKNRI-SGINIIVCTPGRLLQHM 211
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E + ++ LVLDEADR+LD G+ + + + L ++ Q++L SAT T
Sbjct: 212 DENEQMNCDSLQILVLDEADRMLDMGFAKQLNSIVNNLPSER---QTLLFSATQT 263
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
E + ++ LVLDEADR+LD G+ + + + L ++ Q++L SAT T V+ L
Sbjct: 213 ENEQMNCDSLQILVLDEADRMLDMGFAKQLNSIVNNLPSER---QTLLFSATQTRNVKDL 269
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
+ +P+ + +H S PD+LKQ +++ + ++ L SFI
Sbjct: 270 CRVCTNDPVFV------SVHENA-SAATPDNLKQSYVIVEEESKINTLWSFIEAH----- 317
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
++ K L+F+++ A + TE+ S
Sbjct: 318 --KKKKSLIFVSSCKQARFLTEVFS 340
>gi|342888044|gb|EGU87461.1| hypothetical protein FOXB_02046 [Fusarium oxysporum Fo5176]
Length = 795
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 261/512 (50%), Gaps = 53/512 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + +T VQ +I L G DV+ ++TGSGKTLA+ +P+++KL R + + DG+
Sbjct: 67 EASHFQTLTDVQAHAIPLALKGKDVMGAAKTGSGKTLAFLVPVLEKL--YRAQWTEYDGL 124
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+II PTRELA+Q ++ K+ ++ + + GG+ +K E R+ + ++ILV TPGR
Sbjct: 125 GALIISPTRELAVQIFQVLRKVGRNHVFSA-GLVIGGKSLKEEAERLDR-MNILVCTPGR 182
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
+L H T + ++ LVLDEADRI+D G++ D+ +E L K + Q+++ SAT +
Sbjct: 183 MLQHLDQTAGFDANNLQILVLDEADRIMDMGFQSDVDALVEHLPKSR---QTLMFSATQS 239
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V LA ++L++P + +H S P +L+QH+IVTP +L L FI
Sbjct: 240 KKVSDLARLSLKDP------EYVSVHEAAAS-ATPTNLQQHYIVTPLTEKLDTLYGFIKA 292
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+ SK++VF+++ + E L I LHG Q R E+ F
Sbjct: 293 NLK-------SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQKQIARMEITNRFT 344
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
S K L TDV ARG+D P VDW++Q P Y+HRVGRTAR G ++LFL PS
Sbjct: 345 SAKQSCLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYQSNGRAVLFLDPS 404
Query: 768 EV-KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E ++++L+ ++I I+++ + E +++ +S
Sbjct: 405 EEPGMLKKLEQKKIPIQKVNV-----------------------KEKKKKSIKDQLQSMC 441
Query: 827 LQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
Q L K + S+ R + KD +F F ++ L FA S L P V
Sbjct: 442 FQNPDLKYLGQKAFISYTRSIHLQRDKD---VFKFNKLDLDGFAASLGLPGTPQV--KFR 496
Query: 886 KPKNKEELKNK-KMAINKEKSFKQRGNFSKKQ 916
K ++ + +KN ++ ++ + ++ G SKK+
Sbjct: 497 KGEDIKRIKNAPRVGMSSDSEMEEDGEKSKKK 528
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L G DV+ ++TGSGKTLA+ +P+++KL R + + DG+ A+II P
Sbjct: 74 LTDVQAHAIPLALKGKDVMGAAKTGSGKTLAFLVPVLEKL--YRAQWTEYDGLGALIISP 131
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 132 TRELAVQIFQVLRKVGRNHVFSA-GLVIGGKSLKEEAERLDR-MNILVCTPGRMLQHLDQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ D+ +E L K + Q+++ SAT
Sbjct: 190 TAGFDANNLQILVLDEADRIMDMGFQSDVDALVEHLPKSR---QTLMFSAT 237
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ D+ +E L K + Q+++ S
Sbjct: 179 TPGRMLQHLDQTAGFDANNLQILVLDEADRIMDMGFQSDVDALVEHLPKSR---QTLMFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L++P + +H S P +L+QH+IVTP +L L
Sbjct: 236 ATQSKKVSDLARLSLKDP------EYVSVHEAAAS-ATPTNLQQHYIVTPLTEKLDTLYG 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 289 FIKANLK-------SKIIVFLSS 304
>gi|218187571|gb|EEC69998.1| hypothetical protein OsI_00527 [Oryza sativa Indica Group]
Length = 648
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 260/516 (50%), Gaps = 60/516 (11%)
Query: 378 RLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQ 437
R + ++E F+ S P + P + K L +G + T VQ +I +L DV V +
Sbjct: 15 RKRALTEQRFSELS----PALSPEVVKAL-KGGGFRRCTPVQAAAIPLLLSHKDVAVDAA 69
Query: 438 TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIV 497
TGSGKTLA+ +P+++ L+ RP + + +II PTREL+ Q + + +
Sbjct: 70 TGSGKTLAFVVPVVEILRR-RPSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVS 128
Query: 498 PSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
L GG +K+E ++ + G +ILV TPG+L D + +TL + +E L+LDEADR+LD
Sbjct: 129 SMLLVGGFDIKAELKKLEEEGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLD 188
Query: 557 QGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTT 616
G+++ I + L K + ++ L SAT T AV+ LA L+NP++++ T++ T+
Sbjct: 189 LGFQKQITSIISKLPKLR---RTGLFSATQTEAVKELAKAGLRNPVRVEV--KTEVKPTS 243
Query: 617 DSLV--------IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
P L+ +++ + L F++ ++ K++V+ AT
Sbjct: 244 KDGAQQELGPSKTPLGLRLEYMICEASNKSSQLVDFLV-------QNNGKKIMVYFATCA 296
Query: 669 MADYHT---ELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
DY LL ++ G I + HG M Q R + +F ++ SG+L+CTDVAARGLD
Sbjct: 297 CVDYWAIVLPLLDSLKGSPIIPY--HGKMKQGPREKALASFSALSSGILVCTDVAARGLD 354
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEI 785
+P VD IVQY P ++HR GRTAR EG +++FL+P E VE L+ R + + E
Sbjct: 355 IPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTE- 413
Query: 786 KLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR 845
++C N + + + + L D NV KG T++V
Sbjct: 414 --RECSTNAVDIVPQIRSAALEDRNVME------------------------KGLTAFVS 447
Query: 846 FYASYSK-DLRHIFNFKQIHLGHFAKSFALRDAPSV 880
F +Y + +IF++K + +G + L PS+
Sbjct: 448 FVRAYKEHHCSYIFSWKDLEIGRLGMEYGLLQIPSM 483
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
+ T VQ +I +L DV V + TGSGKTLA+ +P+++ L+ RP + + +II
Sbjct: 46 RCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRR-RPSPPKPHEVLGIIIS 104
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHC 123
PTREL+ Q + + + L GG +K+E ++ + G +ILV TPG+L D
Sbjct: 105 PTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPGKLFDVM 164
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ +TL + +E L+LDEADR+LD G+++ I + L K + ++ L SAT T A
Sbjct: 165 ERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLR---RTGLFSATQTEA 218
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 161 LKKQKPQFQSILLSATLTPATCW--CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 218
LKK + + +IL+ TP + + +TL + +E L+LDEADR+LD G+++ I
Sbjct: 142 LKKLEEEGANILVG---TPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSI 198
Query: 219 LEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV------ 272
+ L K + ++ L SAT T AV+ LA L+NP++++ T++ T+
Sbjct: 199 ISKLPKLR---RTGLFSATQTEAVKELAKAGLRNPVRVEV--KTEVKPTSKDGAQQELGP 253
Query: 273 --IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 324
P L+ +++ + L F++ ++ K++V+ AT DY
Sbjct: 254 SKTPLGLRLEYMICEASNKSSQLVDFLV-------QNNGKKIMVYFATCACVDY 300
>gi|168014437|ref|XP_001759758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688888|gb|EDQ75262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 631
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 240/476 (50%), Gaps = 51/476 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + + + + AVI+ P
Sbjct: 33 ATPVQASTIPLLSTYKDVAVDAATGSGKTLAFLVPMVEILRRLTDPL-KAFQVGAVIVSP 91
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 533
TRELA Q + + + L GG + +E A++++ G ++L+ TPGRL D +
Sbjct: 92 TRELASQIYHVLGPFLTTLRGVQAMLLVGGTDVTAEVAKLKQTGANVLIGTPGRLYDIME 151
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
L F +E L+LDEADR+LD G++R + L L KQ+ ++ L SAT T AV L
Sbjct: 152 RVTALDFKNLEVLILDEADRLLDMGFQRQLTAILGHLPKQR---RTGLFSATQTEAVVEL 208
Query: 594 AGMTLQNPIQID--------AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
A L+NP++++ AAD+ + T P L +++ + L F+
Sbjct: 209 ARAGLRNPVRVEVRTQAKAQAADTESFQSKT-----PSGLTLQYLICEGDEKPSQLVHFL 263
Query: 646 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-ENIAFFKLHGSMSQSERTEVFK 704
CQ+ ++K++++ T DY +L + + LHG M Q+ R +
Sbjct: 264 ---CQH----RQNKIILYFMTCACVDYWAIMLPQLESLSGLQAVALHGKMKQAAREKALA 316
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
F + +G+L+CTDVAARGLD+P VDWI+QY P +VHRVGRTAR+G G +L+FL
Sbjct: 317 MFSGMTAGLLVCTDVAARGLDIPGVDWIIQYDPPQDPNVFVHRVGRTARMGQSGDALVFL 376
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
+P E VE L+ R++ IEE C N+ + ++
Sbjct: 377 LPKEDAYVEFLRIRKVPIEE--RPKCSSNVHRILLQ---------------------LRG 413
Query: 825 AVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A + + + + + S++R Y + IF +KQ+ G A F L PS+
Sbjct: 414 AAAKDRDIMEKGLRAFVSYIRAYKEHHCTF--IFKWKQLEAGLAAMGFGLLQLPSM 467
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + + + + AVI+ P
Sbjct: 33 ATPVQASTIPLLSTYKDVAVDAATGSGKTLAFLVPMVEILRRLTDPL-KAFQVGAVIVSP 91
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA Q + + + L GG + +E A++++ G ++L+ TPGRL D +
Sbjct: 92 TRELASQIYHVLGPFLTTLRGVQAMLLVGGTDVTAEVAKLKQTGANVLIGTPGRLYDIME 151
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
L F +E L+LDEADR+LD G++R + L L KQ+ ++ L SAT T A
Sbjct: 152 RVTALDFKNLEVLILDEADRLLDMGFQRQLTAILGHLPKQR---RTGLFSATQTEA 204
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 23/149 (15%)
Query: 189 TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGM 248
L F +E L+LDEADR+LD G++R + L L KQ+ ++ L SAT T AV LA
Sbjct: 155 ALDFKNLEVLILDEADRLLDMGFQRQLTAILGHLPKQR---RTGLFSATQTEAVVELARA 211
Query: 249 TLQNPIQID--------AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
L+NP++++ AAD+ + T P L +++ + L F+
Sbjct: 212 GLRNPVRVEVRTQAKAQAADTESFQSKT-----PSGLTLQYLICEGDEKPSQLVHFL--- 263
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
CQ+ ++K++++ T DY +L
Sbjct: 264 CQH----RQNKIILYFMTCACVDYWAIML 288
>gi|116194814|ref|XP_001223219.1| hypothetical protein CHGG_04005 [Chaetomium globosum CBS 148.51]
gi|118575176|sp|Q2H2J1.1|DBP4_CHAGB RecName: Full=ATP-dependent RNA helicase DBP4
gi|88179918|gb|EAQ87386.1| hypothetical protein CHGG_04005 [Chaetomium globosum CBS 148.51]
Length = 825
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 239/467 (51%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL K + DG+ A+II P
Sbjct: 76 LTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEKL--YHAKWTEYDGLGALIISP 133
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 134 TRELAVQIFEVLRKIGRNH-FFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 191
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + +E L + Q++L SAT + V LA
Sbjct: 192 TANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTR---QTLLFSATQSKRVSDLA 248
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L+ P + A H S P +L+Q +IVTP +L L F+ +
Sbjct: 249 RLSLKEPEYVSA------HEAAVS-ATPTNLQQSYIVTPLAEKLDTLFGFLRTNLK---- 297
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I LHG Q R E+ F S K G L
Sbjct: 298 ---SKIIVFFSSGKQVRFVFESFKR-MQPGIPLLHLHGRQKQVARMEITSRFSSAKYGCL 353
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TDV ARG+D P VDW+VQ P + Y+HRVGRTAR +G ++LFL PS E ++
Sbjct: 354 FATDVVARGVDFPAVDWVVQADCPEDADTYIHRVGRTARYESKGRAVLFLEPSEEAGFLK 413
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ +++ ++++ ++ E +++ +S Q L
Sbjct: 414 RLEQKKVPLQKVNVR-----------------------ENKKKSIKNELQSYNFQSPDLK 450
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+ R + Y + + +FNF ++ L +A S L P +
Sbjct: 451 YLGQKAFISYTR--SIYLQKDKEVFNFNKLDLDGYAASLGLAGTPQI 495
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ+ +I L G D+L ++TGSGKTLA+ +P+++KL K + DG+ A+II P
Sbjct: 76 LTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEKL--YHAKWTEYDGLGALIISP 133
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 134 TRELAVQIFEVLRKIGRNH-FFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 191
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L + Q++L SAT
Sbjct: 192 TANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTR---QTLLFSAT 239
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + ++ LVLDEADRI+D G++ + +E L + Q++L SAT + V L
Sbjct: 191 QTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTR---QTLLFSATQSKRVSDL 247
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P + A H S P +L+Q +IVTP +L L F+ +
Sbjct: 248 ARLSLKEPEYVSA------HEAAVS-ATPTNLQQSYIVTPLAEKLDTLFGFLRTNLK--- 297
Query: 306 EDEESKMLVFMAT 318
SK++VF ++
Sbjct: 298 ----SKIIVFFSS 306
>gi|226291927|gb|EEH47355.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides brasiliensis
Pb18]
Length = 814
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 257/486 (52%), Gaps = 48/486 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T++Q ++ L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHSFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V LA
Sbjct: 188 TAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSATQTQKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P I +H S P L+Q++IVTP +L L SFI +
Sbjct: 245 RLSLQDPEYIS------VHEAASS-ATPAKLQQNYIVTPLPEKLDTLWSFIRSSLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I+ LHG Q R ++ K F K L
Sbjct: 294 ---SKIMVFFSSGKQVRFVYESFRH-MQPGISLLHLHGRQKQGARVDITKKFSVAKHACL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+AARGLD P VDW++Q P + Y+HR GRTAR G ++LFL PS E +++
Sbjct: 350 FATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVLFLEPSEEAAMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE+I ++ Q + +++ M F+ L K L
Sbjct: 410 RLEQKKIPIEKINVRTKKQQSIKHQLQ------------------NMCFKDPAL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S+V+ + + + + +F K + L +A S L AP + G+ K +
Sbjct: 449 --GQKAFISYVK--SIHVQKDKEVFVVKDLPLEAYAASLGLPGAPRIKFIKGEDTKKRKN 504
Query: 894 KNKKMA 899
++++A
Sbjct: 505 ASRQLA 510
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T++Q ++ L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHSFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T
Sbjct: 188 TAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSATQT 237
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++++ LVLDEADRI+D G++ + +E L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++LQ+P I +H S P L+Q++IVTP +L L S
Sbjct: 234 ATQTQKVSDLARLSLQDPEYI------SVHEAASS-ATPAKLQQNYIVTPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIMVFFSS 302
>gi|348688757|gb|EGZ28571.1| hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae]
Length = 658
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 248/495 (50%), Gaps = 70/495 (14%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE-------MRPK 460
+ + +T VQ ++ L DV V + TGSGKTLA+ +PI+Q L+ P+
Sbjct: 19 DALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKTKLADGSITAPR 78
Query: 461 ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPS----WLTGGEKMKSEKARIRK 516
+ + A++I PTRELA Q E K +PS GG + + + IR
Sbjct: 79 HADVTKLVAMVISPTRELARQIFECAEKF---VAHALPSVQLLLFVGGTSVDEDLSLIRG 135
Query: 517 GI---SILVATPGR---LLDHC--KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
+ S+++ TPGR LL+ C ET +F E L+LDEAD +LD G+E + + LE
Sbjct: 136 AVGKCSVVIGTPGRTEDLLNRCVGSSVETREF---EMLILDEADTLLDMGFEVSLNKILE 192
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L KQ+ ++ L SAT T V+ LA L+NP I S + N T V P +L+ +
Sbjct: 193 HLPKQR---RTGLFSATQTQEVKALARAGLRNPATI----SVQVANNTQ--VTPSTLQNY 243
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG--ENIA 686
+ + RL AL +F+ K + K++VF +T D+ +L + +++
Sbjct: 244 YCLVGHDQRLSALHNFVHSK-------KGEKLIVFFSTCGSVDFFARVLEELFKGTKDMP 296
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG M Q +RT + F S+KSG+L+CTDV ARG+DLP VDWIVQY P +VH
Sbjct: 297 VVALHGKMPQKKRTTNYDLFSSLKSGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVH 356
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK-DCLQNLLSVKMEGDLSR 805
RVGRTAR G G +L FL +E V L+ R++ EE+ L D ++++L
Sbjct: 357 RVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEMTLPLDTMEDVLP--------- 407
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
+S +L+ + L K + ++VR Y + + IF FK++ L
Sbjct: 408 ---------------KVKSFILEDRDLLEKGTKAFMAFVRSYKEHQ--CQFIFRFKELDL 450
Query: 866 GHFAKSFALRDAPSV 880
G A+ F L P +
Sbjct: 451 GAVARGFCLLQLPKI 465
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 28/197 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE-------MRPKIS 53
+ +T VQ ++ L DV V + TGSGKTLA+ +PI+Q L+ P+ +
Sbjct: 21 LGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKTKLADGSITAPRHA 80
Query: 54 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPS----WLTGGEKMKSEKARIRKGI 109
+ A++I PTRELA Q E K +PS GG + + + IR +
Sbjct: 81 DVTKLVAMVISPTRELARQIFECAEKF---VAHALPSVQLLLFVGGTSVDEDLSLIRGAV 137
Query: 110 ---SILVATPGR---LLDHC--KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 161
S+++ TPGR LL+ C ET +F E L+LDEAD +LD G+E + + LE L
Sbjct: 138 GKCSVVIGTPGRTEDLLNRCVGSSVETREF---EMLILDEADTLLDMGFEVSLNKILEHL 194
Query: 162 KKQKPQFQSILLSATLT 178
KQ+ ++ L SAT T
Sbjct: 195 PKQR---RTGLFSATQT 208
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 19/148 (12%)
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
C ET +F E L+LDEAD +LD G+E + + LE L KQ+ ++ L SAT T
Sbjct: 157 CVGSSVETREF---EMLILDEADTLLDMGFEVSLNKILEHLPKQR---RTGLFSATQTQE 210
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
V+ LA L+NP I S + N T V P +L+ ++ + RL AL +F+ K
Sbjct: 211 VKALARAGLRNPATI----SVQVANNTQ--VTPSTLQNYYCLVGHDQRLSALHNFVHSK- 263
Query: 302 QNVNEDEESKMLVFMATQDMADYHTELL 329
+ K++VF +T D+ +L
Sbjct: 264 ------KGEKLIVFFSTCGSVDFFARVL 285
>gi|452978751|gb|EME78514.1| hypothetical protein MYCFIDRAFT_37274 [Pseudocercospora fijiensis
CIRAD86]
Length = 817
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/492 (31%), Positives = 256/492 (52%), Gaps = 48/492 (9%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
+S+ E P P K L + + + +T +Q +I L G D+L ++TGSGKTLA+ IP
Sbjct: 54 SSFTELPLSEP-TKAGLKKA-HFSSLTDIQAKAIPLALKGKDILGAAKTGSGKTLAFLIP 111
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L + I G+ A+I+ PTRELA+Q ++ + + + GG+ ++
Sbjct: 112 ILENLYRAQC-IGGDAGLGALIVTPTRELAIQIFDVLRLVGGHGHFFAAGLVIGGKHLRE 170
Query: 510 EKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEI 569
E+ + + ++I+V TPGR+L H T T + LVLDEADR+LD G+++ + +E
Sbjct: 171 EQDALPR-MNIVVCTPGRILQHLSETPTFNVDGLHMLVLDEADRVLDMGFKQTLDAIIEY 229
Query: 570 LKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHF 629
L KQ+ Q++L SAT + V LA ++LQ+P I +H T + P L+Q++
Sbjct: 230 LPKQR---QTLLFSATQSKRVSDLARLSLQDPEYIA------VHETAQA-ATPKGLQQNY 279
Query: 630 IVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
++TP +L AL SFI ++SK++VF +T + E + I +
Sbjct: 280 VITPLPEKLDALWSFI-------QSAKKSKIVVFFSTTKQVRFVYESFRH-MQPGIPLLQ 331
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
L G Q+ R E + F K L TDV ARG+D P VDW+VQ P + Y+HRVG
Sbjct: 332 LFGRKKQTARLETTEKFSKAKYSCLFTTDVVARGIDFPAVDWVVQVDCPEDADTYIHRVG 391
Query: 750 RTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD 808
RTAR EG +++FL PSE + ++ L+ +++ IE I +++ ++ + +++
Sbjct: 392 RTARYEREGRAVMFLDPSEEEGMLTRLEQKKVPIERINIRNKKKSSIKNQLQ-------- 443
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
+ FE L++ K + S+V+ Y KD + IFN ++ L F
Sbjct: 444 ----------KQCFEDVQLKE-----LGRKAFISYVKAL-HYQKD-KEIFNLEKYKLEEF 486
Query: 869 AKSFALRDAPSV 880
A S L AP +
Sbjct: 487 ASSMGLPGAPRI 498
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 104/175 (59%), Gaps = 5/175 (2%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ + +T +Q +I L G D+L ++TGSGKTLA+ IPI++ L + I G+ A+
Sbjct: 73 HFSSLTDIQAKAIPLALKGKDILGAAKTGSGKTLAFLIPILENLYRAQC-IGGDAGLGAL 131
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA+Q ++ + + + GG+ ++ E+ + + ++I+V TPGR+L
Sbjct: 132 IVTPTRELAIQIFDVLRLVGGHGHFFAAGLVIGGKHLREEQDALPR-MNIVVCTPGRILQ 190
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H T T + LVLDEADR+LD G+++ + +E L KQ+ Q++L SAT
Sbjct: 191 HLSETPTFNVDGLHMLVLDEADRVLDMGFKQTLDAIIEYLPKQR---QTLLFSAT 242
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T T + LVLDEADR+LD G+++ + +E L KQ+ Q++L SAT + V L
Sbjct: 194 ETPTFNVDGLHMLVLDEADRVLDMGFKQTLDAIIEYLPKQR---QTLLFSATQSKRVSDL 250
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++LQ+P I +H T + P L+Q++++TP +L AL SFI
Sbjct: 251 ARLSLQDPEYI------AVHETAQA-ATPKGLQQNYVITPLPEKLDALWSFI-------Q 296
Query: 306 EDEESKMLVFMAT 318
++SK++VF +T
Sbjct: 297 SAKKSKIVVFFST 309
>gi|341879497|gb|EGT35432.1| hypothetical protein CAEBREN_29435 [Caenorhabditis brenneri]
Length = 754
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 241/466 (51%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DV+ ++TGSGKTLA IP+++ L R K S + G+ A++I PT
Sbjct: 99 TEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEAL--WRAKWSPEYGLGALVISPT 156
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELALQT + K + + GG ++ E+ RI GI+I+V TPGRLL H
Sbjct: 157 RELALQTFSTINAVGKHHGFSC-GLVIGGSEVAFERNRI-SGINIIVCTPGRLLQHMDEN 214
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
E + ++ LVLDEADR+LD G+ + + + L + Q++L SAT T V+ L
Sbjct: 215 EQMNCDSLQVLVLDEADRMLDMGFAKQLNSIINNLPATR---QTLLFSATQTRNVKDLCR 271
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
+ +P+ + +H + PD+LKQ ++V + ++ AL SFI
Sbjct: 272 VCTNDPVFVS------VHENA-AAATPDNLKQSYVVVEEENKINALWSFIEAH------- 317
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
++ K LVF+ + A + TE+ S L + L G+M+Q +R E F F K+ VLI
Sbjct: 318 KKKKSLVFVNSCKQARFLTEVFSQ-LRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLI 376
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEE 774
TDVA+RGLD +DW++Q P+ DY+HRVGR+AR+ G+SLL + PS E ++ +
Sbjct: 377 ATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVTPSQEEAMIAK 436
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ I IEE+K+ A T +++ + + + + L
Sbjct: 437 LERHSIPIEELKIH-----------------------PDAMTDIRLKLRAILAESQELKE 473
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A K S++R + Y+ + IFN + A SF L P +
Sbjct: 474 YAQKSIVSYLR--SIYTMKDKKIFNVNSVDAAALADSFGLVSVPRI 517
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DV+ ++TGSGKTLA IP+++ L R K S + G+ A++I PT
Sbjct: 99 TEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEAL--WRAKWSPEYGLGALVISPT 156
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELALQT + K + + GG ++ E+ RI GI+I+V TPGRLL H
Sbjct: 157 RELALQTFSTINAVGKHHGFSC-GLVIGGSEVAFERNRI-SGINIIVCTPGRLLQHMDEN 214
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E + ++ LVLDEADR+LD G+ + + + L + Q++L SAT T
Sbjct: 215 EQMNCDSLQVLVLDEADRMLDMGFAKQLNSIINNLPATR---QTLLFSATQT 263
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
E + ++ LVLDEADR+LD G+ + + + L + Q++L SAT T V+ L
Sbjct: 213 ENEQMNCDSLQVLVLDEADRMLDMGFAKQLNSIINNLPATR---QTLLFSATQTRNVKDL 269
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
+ +P+ + +H + PD+LKQ ++V + ++ AL SFI
Sbjct: 270 CRVCTNDPVFV------SVHENA-AAATPDNLKQSYVVVEEENKINALWSFIEAH----- 317
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
++ K LVF+ + A + TE+ S
Sbjct: 318 --KKKKSLVFVNSCKQARFLTEVFS 340
>gi|167384693|ref|XP_001737060.1| ATP-dependent RNA helicase DBP4 [Entamoeba dispar SAW760]
gi|165900336|gb|EDR26680.1| ATP-dependent RNA helicase DBP4, putative [Entamoeba dispar SAW760]
Length = 697
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 213/373 (57%), Gaps = 25/373 (6%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ + R + + DG+ ++I+ P
Sbjct: 112 MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIEFM--YRSRWTELDGLCSIILSP 169
Query: 475 TRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
TRELA Q ++F + + FT + +TGG+ K E+A++ + +++L+ TPGRLL H
Sbjct: 170 TRELAQQIFDVFASITGERFT---AALITGGKDTK-EEAKVIRLMNVLICTPGRLLYHLD 225
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
+T + + L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +VQ L
Sbjct: 226 NTPHFNTTPLRILILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKSVQDL 282
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
++L++P I + P+SL Q +++ ++ L SFI
Sbjct: 283 IRLSLRHPEYISVDEKA-------QYATPESLNQTYMLLGDGDKINVLFSFIRTHTN--- 332
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
SKM+VF T + E L + L+G SQ+ R E TF K G+
Sbjct: 333 ----SKMIVFFQTTKEVRFFFETFKK-LRVGAVLYLLYGRQSQNSRNEQLSTFTKEKRGI 387
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
L CTD+A+RGLD+ VDWIVQY P + Y+HRVGRTAR+ H G +LL L +E +E
Sbjct: 388 LFCTDIASRGLDIQGVDWIVQYDCPEDTAQYIHRVGRTARLNHNGQALLLLTHNEQAFIE 447
Query: 774 ELQNRRIRIEEIK 786
+L+ ++ + ++
Sbjct: 448 QLEKAKVPLNRVE 460
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 114/176 (64%), Gaps = 10/176 (5%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I L G D++ ++TGSGKTLA+ IP+I+ + R + + DG+ ++I+ P
Sbjct: 112 MTPIQRAAIPHALAGRDIIGAARTGSGKTLAFLIPLIEFM--YRSRWTELDGLCSIILSP 169
Query: 66 TRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
TRELA Q ++F + + FT + +TGG+ K E+A++ + +++L+ TPGRLL H
Sbjct: 170 TRELAQQIFDVFASITGERFT---AALITGGKDTK-EEAKVIRLMNVLICTPGRLLYHLD 225
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+T + + L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +
Sbjct: 226 NTPHFNTTPLRILILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKS 278
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
L+LDEADRILD G+++D+ LE L KQ+ Q++L SAT T +VQ L ++L++P I
Sbjct: 238 LILDEADRILDMGFKKDLTAILEHLPKQR---QTMLFSATQTKSVQDLIRLSLRHPEYIS 294
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ P+SL Q +++ ++ L SFI SKM+VF
Sbjct: 295 VDEKA-------QYATPESLNQTYMLLGDGDKINVLFSFIRTHTN-------SKMIVFFQ 340
Query: 318 T 318
T
Sbjct: 341 T 341
>gi|307109210|gb|EFN57448.1| hypothetical protein CHLNCDRAFT_142930 [Chlorella variabilis]
Length = 576
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 248/479 (51%), Gaps = 70/479 (14%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
K+ + E + +T VQ +I +L G DVL ++TGSGKTLA+ IP ++ L R K
Sbjct: 115 KRGIQE-LGFVNMTEVQARTIPQLLVGRDVLGAAKTGSGKTLAFLIPCVELL--YRAKFM 171
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
++G AV+ILPTRELALQ + + + T + GG ++E ++ KG+++LV
Sbjct: 172 PRNGTGAVVILPTRELALQIYNVARDVMQHHTQ-THGLVMGGANRRAEAEKLVKGVNLLV 230
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
+TPGRLLDH ++T+ + + LV+DEADRIL+ G+E ++ + ++IL K + Q++L
Sbjct: 231 STPGRLLDHLQNTKGFVYRNLACLVIDEADRILEIGFEEEMRQIVKILPKDR---QTMLF 287
Query: 583 SATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 641
SAT T V+ LA ++ + P+ + D T ++ + L+Q + V P R + L
Sbjct: 288 SATQTTKVEDLARLSFKRKPLYVGIDD-------TKAVATREGLEQGYCVVPADKRFLLL 340
Query: 642 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTE 701
+F+ ++ K++VF ++ + +H+ELL+ + +I +HG Q++RT
Sbjct: 341 FTFL-------KKNASKKVMVFFSSCNSVKFHSELLNYI---DIPVKAIHGKQKQAKRTT 390
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
F F SG+L+CTDVAARGLD+P VDWI+QY P +Y+HR E S L
Sbjct: 391 TFFEFCQADSGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHR---------ELSFL 441
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
+L ++V L E E S+L++ +Q
Sbjct: 442 KYLKAAKVPLNE-------------------------YEFPTSKLSN---------VQSQ 467
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E V + LH SA + + S++ Y S+ L+ FN + L A+SF P V
Sbjct: 468 LEKLVEKNYYLHQSAKEAFRSYILAYNSHH--LKDTFNIHSLDLKAVARSFGFSSPPRV 524
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I +L G DVL ++TGSGKTLA+ IP ++ L R K ++G A
Sbjct: 121 LGFVNMTEVQARTIPQLLVGRDVLGAAKTGSGKTLAFLIPCVELL--YRAKFMPRNGTGA 178
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V+ILPTRELALQ + + + T + GG ++E ++ KG+++LV+TPGRLL
Sbjct: 179 VVILPTRELALQIYNVARDVMQHHTQ-THGLVMGGANRRAEAEKLVKGVNLLVSTPGRLL 237
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + LV+DEADRIL+ G+E ++ + ++IL K + Q++L SAT T
Sbjct: 238 DHLQNTKGFVYRNLACLVIDEADRILEIGFEEEMRQIVKILPKDR---QTMLFSATQT 292
>gi|302682610|ref|XP_003030986.1| hypothetical protein SCHCODRAFT_77182 [Schizophyllum commune H4-8]
gi|300104678|gb|EFI96083.1| hypothetical protein SCHCODRAFT_77182 [Schizophyllum commune H4-8]
Length = 775
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 254/499 (50%), Gaps = 53/499 (10%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
K+ L + I +T VQ S+ L G DVL ++TGSGKTLA+ IP+++ L R K
Sbjct: 64 KRGLKKAAFIN-MTDVQAKSLPVSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWG 120
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
DG+ A+II PTRELA+Q E+ + F + GG+ +K E+ R+ + ++ILV
Sbjct: 121 PADGLGALIISPTRELAVQIFEVLRSIG-PFHSFSAGLVIGGKNLKDERDRLVR-MNILV 178
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
ATPGRLL H T + ++ LVLDEADRILD G+ + ++ L L K + Q++L
Sbjct: 179 ATPGRLLQHMDQTYGFECDNLQVLVLDEADRILDMGFAKTLSALLGHLPKSR---QTLLF 235
Query: 583 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
SAT T +V LA ++L +P I ++ + H T P +L+QH+ + +L L
Sbjct: 236 SATQTDSVSDLARLSLTDPAFIATKEAEESHTAT----TPKNLEQHYAICTLDQKLDLLW 291
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SFI Q SK LVF+++ + E + ++ LHG Q R +
Sbjct: 292 SFIKTHLQ-------SKTLVFLSSCKQVRFVYETFCK-MQPGVSLLHLHGKQKQMTRLAM 343
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
+ F + VL TD+AARGLD P VDW++Q AP Y+HRVGRTAR +G LL
Sbjct: 344 YDRFTKMSHVVLFATDIAARGLDFPAVDWVLQLDAPEDVETYIHRVGRTARYESKGKGLL 403
Query: 763 FLIPSEVK-LVEELQNRRIRIEEIKLKDC-LQNLLSVKMEGDLSRLADGNVETAATALQM 820
FL+PSE + ++ R I I++IK++ QN+ E L +LA
Sbjct: 404 FLMPSEEEGMLAAFAKRDIDIKKIKIRPSKTQNI-----ENQLQKLA------------- 445
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q+ + + + S++R + Y + IF Q+ + +A+S L P +
Sbjct: 446 ------FQEPEIKYLGQRAFVSYLR--SVYLHKDKSIFKVDQLPVDRYAESLGLPGTPKI 497
Query: 881 ISGIGKPKNKEELKNKKMA 899
K +KE K KK A
Sbjct: 498 -----KFLSKELAKQKKNA 511
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 105/173 (60%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ S+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A+II P
Sbjct: 75 MTDVQAKSLPVSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPADGLGALIISP 132
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ + F + GG+ +K E+ R+ + ++ILVATPGRLL H
Sbjct: 133 TRELAVQIFEVLRSIG-PFHSFSAGLVIGGKNLKDERDRLVR-MNILVATPGRLLQHMDQ 190
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRILD G+ + ++ L L K + Q++L SAT T
Sbjct: 191 TYGFECDNLQVLVLDEADRILDMGFAKTLSALLGHLPKSR---QTLLFSATQT 240
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++ LVLDEADRILD G+ + ++ L L K + Q++L S
Sbjct: 180 TPGRLLQHMDQTYGFECDNLQVLVLDEADRILDMGFAKTLSALLGHLPKSR---QTLLFS 236
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V LA ++L +P I ++ + H T P +L+QH+ + +L L S
Sbjct: 237 ATQTDSVSDLARLSLTDPAFIATKEAEESHTAT----TPKNLEQHYAICTLDQKLDLLWS 292
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q SK LVF+++
Sbjct: 293 FIKTHLQ-------SKTLVFLSS 308
>gi|226499134|ref|NP_001147316.1| ATP-dependent rRNA helicase spb4 [Zea mays]
gi|195609842|gb|ACG26751.1| ATP-dependent rRNA helicase spb4 [Zea mays]
Length = 641
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 253/495 (51%), Gaps = 51/495 (10%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
P + P + L+ G + T VQ +I +L DV V + TGSGKTLA+ +P+++ L+
Sbjct: 25 PALSPEVVDALDRG-GFQRCTPVQAAAIPHLLSHKDVAVDAATGSGKTLAFIVPVVEILR 83
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
R + + A+II PTREL+ Q + + + L GG +K+E ++
Sbjct: 84 R-RSSPPKSHEVLALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVE 142
Query: 516 K-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK 574
+ G +ILV TPG+L D HT+ L++ +E L+LDEADR+LD G+++ I L +L K +
Sbjct: 143 EEGANILVGTPGKLFD-IMHTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLR 201
Query: 575 PQFQSILLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTDSL---VIPDSLKQH 628
++ L SAT T AV L+ L+NPI+++ A ST L + P L+
Sbjct: 202 ---RTGLFSATQTKAVADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSITPLGLRLE 258
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHT---ELLSTVLGENI 685
+++ + L F++ QN + K++V+ AT DY L++++ G I
Sbjct: 259 YMLCEASKKSSQLVDFLV---QNSGK----KIMVYFATCACVDYWAVVLPLINSLKGSPI 311
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
+ HG M QS R + +F ++ SGVL+CTDVAARGLD+P VD IVQY P ++
Sbjct: 312 IAY--HGKMKQSLREKALASFSALSSGVLVCTDVAARGLDIPSVDLIVQYDPPQDPNVFI 369
Query: 746 HRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
HR GRTAR EG +++FL+P E VE L+ R + + E ++C N V +
Sbjct: 370 HRAGRTARYDQEGDAIVFLLPKEDTYVEFLKLRGVPLTE---RECPANTDDVVPQ----- 421
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
SA L+ + + + + S+VR Y + +IF +K + +
Sbjct: 422 ----------------IRSAALEDRNVMEKGLRAFVSFVRAYKEHH--CSYIFRWKDLEI 463
Query: 866 GHFAKSFALRDAPSV 880
G A + L PS+
Sbjct: 464 GKLAMEYGLLQIPSM 478
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 6/179 (3%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
+ T VQ +I +L DV V + TGSGKTLA+ +P+++ L+ R + + A+II
Sbjct: 42 RCTPVQAAAIPHLLSHKDVAVDAATGSGKTLAFIVPVVEILRR-RSSPPKSHEVLALIIS 100
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHC 123
PTREL+ Q + + + L GG +K+E ++ + G +ILV TPG+L D
Sbjct: 101 PTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPGKLFD-I 159
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATC 182
HT+ L++ +E L+LDEADR+LD G+++ I L +L K + ++ L SAT T A
Sbjct: 160 MHTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLR---RTGLFSATQTKAVA 215
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 20/171 (11%)
Query: 161 LKKQKPQFQSILLSATLTPATCW-CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 219
LKK + + +IL+ TP + HT+ L++ +E L+LDEADR+LD G+++ I L
Sbjct: 138 LKKVEEEGANILVG---TPGKLFDIMHTDALEYKNLEILILDEADRLLDMGFQKHINFIL 194
Query: 220 EILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTDSL---VI 273
+L K + ++ L SAT T AV L+ L+NPI+++ A ST L +
Sbjct: 195 SMLPKLR---RTGLFSATQTKAVADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSIT 251
Query: 274 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 324
P L+ +++ + L F++ QN + K++V+ AT DY
Sbjct: 252 PLGLRLEYMLCEASKKSSQLVDFLV---QNSGK----KIMVYFATCACVDY 295
>gi|295667643|ref|XP_002794371.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286477|gb|EEH42043.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 816
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 257/486 (52%), Gaps = 48/486 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T++Q ++ L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHSFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V LA
Sbjct: 188 TAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSATQTQKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P I +H S P L Q++IVTP +L L SFI +
Sbjct: 245 RLSLRDPEYIS------VHEAASS-ATPAKLHQNYIVTPLPEKLDTLWSFIRSSLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I+ LHG Q R ++ K F K L
Sbjct: 294 ---SKIMVFFSSGKQVRFVYESFRH-MQPGISLLHLHGRQKQGARVDITKKFSVAKHACL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+AARGLD P VDW++Q P + Y+HR GRTAR G ++LFL P+ E +++
Sbjct: 350 FATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVLFLDPTEEAAMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ R+I IE+I ++ Q + +++ M F+ L K L
Sbjct: 410 RLEQRKIPIEKINVRTKKQQSIKNQLQ------------------NMCFKDPAL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEEL 893
K + S+V+ + + + + +F K + L +A+S L AP + G+ K +
Sbjct: 449 --GQKAFISYVK--SIHVQKDKEVFVVKDLPLEEYAESLGLPGAPRIKFIKGEDTKKRKN 504
Query: 894 KNKKMA 899
++++A
Sbjct: 505 ASRQLA 510
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T++Q ++ L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHSFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T
Sbjct: 188 TAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSATQT 237
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++++ LVLDEADRI+D G++ + +E L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L++P I +H S P L Q++IVTP +L L S
Sbjct: 234 ATQTQKVSDLARLSLRDPEYI------SVHEAASS-ATPAKLHQNYIVTPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIMVFFSS 302
>gi|320164285|gb|EFW41184.1| ATP-dependent RNA helicase dbp4 [Capsaspora owczarzaki ATCC 30864]
Length = 963
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 210/372 (56%), Gaps = 23/372 (6%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T +Q++S+ L G DVL ++TGSGKTLA+ +P++++L +R S +DGI A++I
Sbjct: 219 KLTEIQRVSLPDGLAGRDVLGAAKTGSGKTLAFLLPVVERLYRLR--WSSEDGIGAIVIT 276
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA Q E+ K+ + + GG+ ++ EK RI G++ILV TPGRLL H
Sbjct: 277 PTRELAFQIFEVLRKIGARHE-LAAGLVIGGKDVEQEKERI-NGMNILVCTPGRLLQHMD 334
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
T S ++ LVLDEADRILD G+ R + L+ L + + Q++L SAT T +V+ L
Sbjct: 335 ETPNFDCSNLQMLVLDEADRILDMGFARTLDAILDFLPRSR---QTLLFSATQTKSVRDL 391
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
A ++L +P + A H+T P L Q ++VT +L L SFI
Sbjct: 392 ARLSLTSP-EYAAVHEHAKHST------PKGLSQSYVVTALPDKLDILYSFI-------R 437
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
SK LVF+++ + E L + L+G Q +R ++ F S V
Sbjct: 438 THTSSKTLVFLSSCKQVRFVLETFRR-LRPGVPLMALYGKQKQMKRMAIYSDFAKKPSAV 496
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LV 772
L TD+AARGLD P V W++Q P ++ Y+HRVGRTAR G++LL ++PSE K +V
Sbjct: 497 LFATDIAARGLDFPAVHWVIQVDCPEDASTYIHRVGRTARADKSGNALLMVLPSEEKGMV 556
Query: 773 EELQNRRIRIEE 784
L +RI IE+
Sbjct: 557 ATLAEKRIPIEK 568
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q++S+ L G DVL ++TGSGKTLA+ +P++++L +R S +DGI A++I
Sbjct: 219 KLTEIQRVSLPDGLAGRDVLGAAKTGSGKTLAFLLPVVERLYRLR--WSSEDGIGAIVIT 276
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q E+ K+ + + GG+ ++ EK RI G++ILV TPGRLL H
Sbjct: 277 PTRELAFQIFEVLRKIGARHE-LAAGLVIGGKDVEQEKERI-NGMNILVCTPGRLLQHMD 334
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ R + L+ L + + Q++L SAT T
Sbjct: 335 ETPNFDCSNLQMLVLDEADRILDMGFARTLDAILDFLPRSR---QTLLFSATQT 385
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ LVLDEADRILD G+ R + L+ L + + Q++L S
Sbjct: 325 TPGRLLQHMDETPNFDCSNLQMLVLDEADRILDMGFARTLDAILDFLPRSR---QTLLFS 381
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L +P + A H+T P L Q ++VT +L L S
Sbjct: 382 ATQTKSVRDLARLSLTSP-EYAAVHEHAKHST------PKGLSQSYVVTALPDKLDILYS 434
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI SK LVF+++
Sbjct: 435 FI-------RTHTSSKTLVFLSS 450
>gi|342319377|gb|EGU11326.1| ATP-dependent RNA helicase dbp-4 [Rhodotorula glutinis ATCC 204091]
Length = 822
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 267/531 (50%), Gaps = 61/531 (11%)
Query: 387 FAPTSYEEFPGIHPFMKKNLN--EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
F T +EF G P ++ L + T++T VQQ ++ L G DVL ++TGSGKTL
Sbjct: 41 FETTDAQEF-GDLPLSRQTLAGLKSAYYTRMTDVQQRALPLALKGKDVLGAARTGSGKTL 99
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
A+ IP+++ L +R + ++DG+ A++I PTRELA+Q E+ K+ + + GG
Sbjct: 100 AFLIPVLEVL--LRKRWGQQDGLGALVISPTRELAVQIFEVLRKIGHQHNFSA-GLVIGG 156
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
+ +K E+ R+ + ++IL+ATPGRLL H T ++ LVLDEADRILD G+ +
Sbjct: 157 KNLKHEQERLSR-MNILIATPGRLLQHMDQTLGFDCDHLQLLVLDEADRILDMGFSATLN 215
Query: 565 EFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS------------TDI 612
+ L K + Q++L SAT T +V+ LA ++L+ P + ++
Sbjct: 216 AIVANLPKSR---QTLLFSATQTKSVKDLARLSLKEPEYVAVRETGAGKGKEKAEDGEGE 272
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 672
+P +L+QH++V +L L SFI +K +VF+++ +
Sbjct: 273 GEEEQVEEVPKNLEQHYMVVELPQKLDMLWSFIKTHLY-------TKTIVFLSSTKQVRF 325
Query: 673 HTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
E + + +HG Q +R E+++ F + K +L TDVAARGLD P +DW+
Sbjct: 326 VYENFRH-MRPGVPLMHMHGKQKQMQRLEIYQRFLTSKHAILFATDVAARGLDFPAIDWV 384
Query: 733 VQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCL 791
VQ AP Y+HRVGRTAR +G +LLFL+PSE + +++ + ++I + +IK D
Sbjct: 385 VQVDAPEDVETYIHRVGRTARYQAKGRALLFLLPSEEEGMLKRFEAKKIEVNKIKANDKK 444
Query: 792 QNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYS 851
+ +++ ++A Q + A + + S+VR
Sbjct: 445 KQ-----------------------SIRSQLQNAAFQYPEIKFLAQRAFISYVR-SVHLQ 480
Query: 852 KDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINK 902
KD + IF + L +A S L AP + K + K+E KK + +
Sbjct: 481 KD-KSIFKLDALPLEEYAASLGLAGAPKI-----KFQTKQEASEKKNKVRQ 525
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T++T VQQ ++ L G DVL ++TGSGKTLA+ IP+++ L +R + ++DG+ A++I
Sbjct: 68 TRMTDVQQRALPLALKGKDVLGAARTGSGKTLAFLIPVLEVL--LRKRWGQQDGLGALVI 125
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+Q E+ K+ + + GG+ +K E+ R+ + ++IL+ATPGRLL H
Sbjct: 126 SPTRELAVQIFEVLRKIGHQHNFSA-GLVIGGKNLKHEQERLSR-MNILIATPGRLLQHM 183
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADRILD G+ + + L K + Q++L SAT T
Sbjct: 184 DQTLGFDCDHLQLLVLDEADRILDMGFSATLNAIVANLPKSR---QTLLFSATQT 235
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +TL F ++ LVLDEADRILD G+ + + L K + Q++L S
Sbjct: 175 TPGRLLQHMDQTLGFDCDHLQLLVLDEADRILDMGFSATLNAIVANLPKSR---QTLLFS 231
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADS------------TDIHNTTDSLVIPDSLKQHFIV 283
AT T +V+ LA ++L+ P + ++ +P +L+QH++V
Sbjct: 232 ATQTKSVKDLARLSLKEPEYVAVRETGAGKGKEKAEDGEGEGEEEQVEEVPKNLEQHYMV 291
Query: 284 TPPKLRLVALASFI 297
+L L SFI
Sbjct: 292 VELPQKLDMLWSFI 305
>gi|451848323|gb|EMD61629.1| hypothetical protein COCSADRAFT_148556 [Cochliobolus sativus
ND90Pr]
Length = 813
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 215/391 (54%), Gaps = 33/391 (8%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTL++ IP+++ L ++ + G+ A+I+ P
Sbjct: 72 MTDIQAKAIPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HVGPDAGLGALILSP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ K+ + L GG+ +++E+ + K ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLQAEREALTK-MNILVATPGRMLQHLSQ 189
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G++RD+ +E L K++ Q++L SAT + V LA
Sbjct: 190 TAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKER---QTLLFSATQSKKVSDLA 246
Query: 595 GMTLQNP--IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
++LQ+P + + A D T P L Q++I+ P + +L L SFI
Sbjct: 247 RLSLQDPEYVSVHAEDKT---------ATPKGLTQNYIICPLEEKLDTLWSFI------- 290
Query: 653 NEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSG 712
++SK+L F ++ + E + I +HG Q R + F S K
Sbjct: 291 QSSKKSKILCFFSSAKTVRFVYESFRH-MQPGIPLLHIHGRQKQGARLDTTAKFSSAKHS 349
Query: 713 VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-L 771
L TDVAARGLD P VD+++Q P Y+HRVGRTAR EG +LFL PSE + +
Sbjct: 350 CLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEEGM 409
Query: 772 VEELQNRRIRIEEIK--------LKDCLQNL 794
++ L+ +++ IE I +KD LQN+
Sbjct: 410 LKRLEAKKVPIEMINVRQKKRQSIKDQLQNM 440
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTL++ IP+++ L ++ + G+ A+I+ P
Sbjct: 72 MTDIQAKAIPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HVGPDAGLGALILSP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ + L GG+ +++E+ + K ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLQAEREALTK-MNILVATPGRMLQHLSQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRILD G++RD+ +E L K++ Q++L SAT
Sbjct: 190 TAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKER---QTLLFSAT 237
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 23/145 (15%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T F+ ++ LVLDEADRILD G++RD+ +E L K++ Q++L S
Sbjct: 179 TPGRMLQHLSQTAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKER---QTLLFS 235
Query: 236 ATLTPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 293
AT + V LA ++LQ+P + + A D T P L Q++I+ P + +L L
Sbjct: 236 ATQSKKVSDLARLSLQDPEYVSVHAEDKT---------ATPKGLTQNYIICPLEEKLDTL 286
Query: 294 ASFILGKCQNVNEDEESKMLVFMAT 318
SFI ++SK+L F ++
Sbjct: 287 WSFI-------QSSKKSKILCFFSS 304
>gi|402083290|gb|EJT78308.1| ATP-dependent RNA helicase DBP4 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 804
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 155/493 (31%), Positives = 252/493 (51%), Gaps = 50/493 (10%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
P + + P P + L + + +T +Q +I L G D+L ++TGSGKTLA+ +
Sbjct: 49 PNGFADLPLSEP-TARGLRDS-HFETLTDIQARAIPLALKGSDILGAAKTGSGKTLAFIV 106
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
P+++KL R + + D + A+++ PTRELA+QT E+ K+ + ++ + GG+ ++
Sbjct: 107 PLLEKL--YRERWTELDSVGALVLSPTRELAVQTFEVLRKVGRHHSFSA-GLVIGGKSLR 163
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E R+ + ++IL+ TPGR+L H T ++ LVLDEADRI+D G++ + +E
Sbjct: 164 EEAERLGR-MNILICTPGRMLQHLDQTAGFDVDSLQMLVLDEADRIMDLGFQSAVDALVE 222
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L + + Q++L SAT + V LA ++L+ P + +H + +L+QH
Sbjct: 223 HLPRDR---QTLLFSATQSRKVSDLARLSLKEP------EYVAVHEAAAAATPA-TLQQH 272
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
+IVTP +L L FI + SKM+VF+++ + E + +
Sbjct: 273 YIVTPLPEKLDTLWGFIKANLK-------SKMIVFLSSGKQVRFVYESFRH-MQPGMPLL 324
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
LHG Q R EV F S+K+ L TDV ARG+D P VDW+VQ AP + Y+HRV
Sbjct: 325 HLHGRQKQLARLEVTSRFGSMKNACLFATDVVARGVDFPAVDWVVQVDAPEDADTYIHRV 384
Query: 749 GRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
GRTAR +G ++LFL PSE K +V L+ +++ I+++
Sbjct: 385 GRTARYESQGRAVLFLDPSEEKGMVARLEQKKVPIQKVH--------------------- 423
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
+ ++Q +S +Q + K + S+ R KD + IF FK++ L
Sbjct: 424 --VKDKKKKSIQEELQSMCWKQHDVKYLGQKAFISYAR-SVHLQKD-KEIFKFKELDLEG 479
Query: 868 FAKSFALRDAPSV 880
FAKS L AP +
Sbjct: 480 FAKSIGLAGAPQI 492
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++KL R + + D + A+++ P
Sbjct: 73 LTDIQARAIPLALKGSDILGAAKTGSGKTLAFIVPLLEKL--YRERWTELDSVGALVLSP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+QT E+ K+ + ++ + GG+ ++ E R+ + ++IL+ TPGR+L H
Sbjct: 131 TRELAVQTFEVLRKVGRHHSFSA-GLVIGGKSLREEAERLGR-MNILICTPGRMLQHLDQ 188
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRI+D G++ + +E L + + Q++L SAT
Sbjct: 189 TAGFDVDSLQMLVLDEADRIMDLGFQSAVDALVEHLPRDR---QTLLFSAT 236
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T ++ LVLDEADRI+D G++ + +E L + + Q++L SAT + V L
Sbjct: 188 QTAGFDVDSLQMLVLDEADRIMDLGFQSAVDALVEHLPRDR---QTLLFSATQSRKVSDL 244
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P + +H + P +L+QH+IVTP +L L FI +
Sbjct: 245 ARLSLKEP------EYVAVHEAA-AAATPATLQQHYIVTPLPEKLDTLWGFIKANLK--- 294
Query: 306 EDEESKMLVFMAT 318
SKM+VF+++
Sbjct: 295 ----SKMIVFLSS 303
>gi|449476608|ref|XP_004176464.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Taeniopygia guttata]
Length = 596
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 249/484 (51%), Gaps = 48/484 (9%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ Q+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKMQVGA 85
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 528
+II PTRELA+Q E+ + K F GG + + ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPMFSQILFIGGRNPMEDVEKFKEHGGNIIVATPGRL 145
Query: 529 LDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
D + + L + ++ LVLDEADR+LD G+E + L+ L KQ+ ++ L S
Sbjct: 146 EDLFRRKADGLDLASCVKALDVLVLDEADRLLDMGFEASLNAILDFLPKQR---RTGLFS 202
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T V+ L L+NP++I + + T P L+ +++V + L
Sbjct: 203 ATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQK--TPTRLENYYMVCRADEKFNQLVH 260
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ + ++ K LVF +T +Y+ + L +++ + + +HG M + +R ++F
Sbjct: 261 FL-------RQHKQEKHLVFFSTCACVEYYGKALESLI-KQVKIMSIHGKM-KHKRNKIF 311
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
FR + G+L+CTDV ARG+D+P V W++QY PSS++ +VHR GRTAR+G+ GS+L+F
Sbjct: 312 TEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNVGSALVF 371
Query: 764 LIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L+P E V L N++ ++E+K + + +LL
Sbjct: 372 LLPMEESYVNFLSINQKCPMQEMKPQTNVLDLLP------------------------KL 407
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
+S L + + K + S+V+ YA + +L IF K + A+ FAL P +
Sbjct: 408 KSMALADRAMFEKGMKAFVSYVQAYAKHECNL--IFRIKDLDFASLARGFALLKMPKMPE 465
Query: 883 GIGK 886
GK
Sbjct: 466 LRGK 469
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 146/332 (43%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ Q+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ + K F GG + + ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPMFSQILFIGGRNPMEDVEKFKEHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E L +AD + D+A ++ L
Sbjct: 146 ---------------EDLFRRKADGL-------DLASCVKAL------------------ 165
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+ LVLDEADR+LD G+E + L+ L KQ+ ++ L SAT T
Sbjct: 166 ----------------DVLVLDEADRLLDMGFEASLNAILDFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + + T P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVAASNTQK--TPTRLENYYMVCRADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+ ++ K LVF +T +Y+ + L +
Sbjct: 263 -----RQHKQEKHLVFFSTCACVEYYGKALES 289
>gi|347965054|ref|XP_001230842.3| AGAP001057-PA [Anopheles gambiae str. PEST]
gi|333467670|gb|EAU77138.3| AGAP001057-PA [Anopheles gambiae str. PEST]
Length = 761
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 258/495 (52%), Gaps = 57/495 (11%)
Query: 391 SYEEFPGIHPFMKKNLNEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
++++FP KK L G+ + T+ T +Q+ SI P + G D+L ++TGSGKTLA+
Sbjct: 80 TFQDFP----LSKKTL-AGLAEADFTRPTVIQRESILPAIFGKDILAAAKTGSGKTLAFI 134
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
IPI+++L K +R DG+ A+II PTRELA+Q E T++ + + + L GG+ +
Sbjct: 135 IPILERL--FVEKWTRMDGLGALIITPTRELAVQIYETMTQVGRHHDFTI-GLLIGGQNL 191
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
K E+ R+ ++I++ TPGRLL H + ++ LVLDEADR LD G+ + +
Sbjct: 192 KYERNRLH-NLNIIIGTPGRLLQHMDQNPLFDTTNLKILVLDEADRCLDMGFSATMDSII 250
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
E L + + Q++L SAT T +V+ LA + L NP+QI + + + P L+Q
Sbjct: 251 ENLPEVR---QTVLFSATQTNSVRDLARVKLVNPVQIAPHEH-------EQIATPAKLQQ 300
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
++V +L L SF+ + K++VF +T Y ++ + ++
Sbjct: 301 SYVVVDLANKLTMLWSFL-------QTHPKQKVIVFFSTCKQVKYFYQVFKKLRPTSL-L 352
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGV-LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
L+G M+Q +R +++ F K+ V L+ TDVA+RGLD P V+W+VQ P Y+H
Sbjct: 353 LPLYGGMNQEKRNKIYGDFCKKKTNVCLLATDVASRGLDFPKVNWVVQIDCPEDVAQYIH 412
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR+ G +LL L+P EV +++ L+ +I I++IK+
Sbjct: 413 RAGRTARLNTSGENLLVLLPHEVDPMLDSLEKNKIPIKQIKID----------------- 455
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
E + + +S + Q L SA + + ++++ A + +F ++L
Sbjct: 456 ------ERQLFSPLLKIQSLLAQSPELKESAKRAFVAYIKSIALMKN--KEVFQLHNLNL 507
Query: 866 GHFAKSFALRDAPSV 880
FA S L + P V
Sbjct: 508 DEFANSLGLSNTPRV 522
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 109/177 (61%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T+ T +Q+ SI P + G D+L ++TGSGKTLA+ IPI+++L K +R DG+ A+
Sbjct: 98 DFTRPTVIQRESILPAIFGKDILAAAKTGSGKTLAFIIPILERL--FVEKWTRMDGLGAL 155
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E T++ + + + L GG+ +K E+ R+ ++I++ TPGRLL
Sbjct: 156 IITPTRELAVQIYETMTQVGRHHDFTI-GLLIGGQNLKYERNRLH-NLNIIIGTPGRLLQ 213
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H + ++ LVLDEADR LD G+ + +E L + + Q++L SAT T
Sbjct: 214 HMDQNPLFDTTNLKILVLDEADRCLDMGFSATMDSIIENLPEVR---QTVLFSATQT 267
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADR LD G+ + +E L + + Q+VL SAT T +V+ LA + L NP+QI
Sbjct: 229 LVLDEADRCLDMGFSATMDSIIENLPEVR---QTVLFSATQTNSVRDLARVKLVNPVQIA 285
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ + + P L+Q ++V +L L SF+ + K++VF +
Sbjct: 286 PHEH-------EQIATPAKLQQSYVVVDLANKLTMLWSFL-------QTHPKQKVIVFFS 331
Query: 318 TQDMADYHTELL 329
T Y ++
Sbjct: 332 TCKQVKYFYQVF 343
>gi|115434688|ref|NP_001042102.1| Os01g0164500 [Oryza sativa Japonica Group]
gi|143361417|sp|Q761Z9.2|RH18_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 18; AltName:
Full=BRI1-KD-interacting protein 115; Short=BIP115
gi|15528747|dbj|BAB64789.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|21327991|dbj|BAC00580.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113531633|dbj|BAF04016.1| Os01g0164500 [Oryza sativa Japonica Group]
gi|125569150|gb|EAZ10665.1| hypothetical protein OsJ_00495 [Oryza sativa Japonica Group]
gi|215697070|dbj|BAG91064.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737306|dbj|BAG96235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 647
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 251/498 (50%), Gaps = 56/498 (11%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
P + P + K L +G + T VQ +I +L DV V + TGSGKTLA+ +P+++ L+
Sbjct: 28 PALSPEVVKAL-KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILR 86
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
RP + + +II PTREL+ Q + + + L GG +K+E ++
Sbjct: 87 R-RPSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLE 145
Query: 516 K-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK 574
+ G +ILV TPG+L D + +TL + +E L+LDEADR+LD G+++ I + L K +
Sbjct: 146 EEGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLR 205
Query: 575 PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV--------IPDSLK 626
++ L SAT T AV+ LA L+NP++++ T++ T P L+
Sbjct: 206 ---RTGLFSATQTEAVKELAKAGLRNPVRVEV--KTEVKPTGKDGAQQELGPSKTPLGLR 260
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHT---ELLSTVLGE 683
+++ + L F++ ++ K++V+ AT DY LL ++ G
Sbjct: 261 LEYMICEASNKSSQLVDFLV-------QNNGKKIMVYFATCACVDYWAIVLPLLDSLKGS 313
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
I + HG M Q R + +F ++ SG+L+CTDVAARGLD+P VD IVQY P
Sbjct: 314 PIIPY--HGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNV 371
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
++HR GRTAR EG +++FL+P E VE L+ R + + E ++C N + + +
Sbjct: 372 FIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTE---RECSTNAVDIVPQIRS 428
Query: 804 SRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSK-DLRHIFNFKQ 862
+ L D NV KG T++V F +Y + +IF++K
Sbjct: 429 AALEDRNVME------------------------KGLTAFVSFVRAYKEHHCSYIFSWKD 464
Query: 863 IHLGHFAKSFALRDAPSV 880
+ +G + L PS+
Sbjct: 465 LEIGRLGMEYGLLQIPSM 482
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
+ T VQ +I +L DV V + TGSGKTLA+ +P+++ L+ RP + + +II
Sbjct: 45 RCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRR-RPSPPKPHEVLGIIIS 103
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHC 123
PTREL+ Q + + + L GG +K+E ++ + G +ILV TPG+L D
Sbjct: 104 PTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPGKLFDVM 163
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ +TL + +E L+LDEADR+LD G+++ I + L K + ++ L SAT T A
Sbjct: 164 ERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLR---RTGLFSATQTEA 217
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 161 LKKQKPQFQSILLSATLTPATCW--CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 218
LKK + + +IL+ TP + + +TL + +E L+LDEADR+LD G+++ I
Sbjct: 141 LKKLEEEGANILVG---TPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSI 197
Query: 219 LEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV------ 272
+ L K + ++ L SAT T AV+ LA L+NP++++ T++ T
Sbjct: 198 ISKLPKLR---RTGLFSATQTEAVKELAKAGLRNPVRVEV--KTEVKPTGKDGAQQELGP 252
Query: 273 --IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 324
P L+ +++ + L F++ ++ K++V+ AT DY
Sbjct: 253 SKTPLGLRLEYMICEASNKSSQLVDFLV-------QNNGKKIMVYFATCACVDY 299
>gi|358341510|dbj|GAA49170.1| ATP-dependent RNA helicase DDX10/DBP4 [Clonorchis sinensis]
Length = 688
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 254/493 (51%), Gaps = 37/493 (7%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+ +FP P + + G T++T +Q+++I+ IL G DV+V + TGSGKTLA+ IP++
Sbjct: 17 FTQFPLSKPTLSALKSNG--FTKMTDIQKMAIKHILLGSDVVVEAATGSGKTLAFLIPML 74
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK-MKSE 510
+L R ++ DG A+I+ PTRELA Q + + C F + + + + G +K +
Sbjct: 75 DRLYSSR--VTSLDGPVAIILTPTRELARQISMVLKRFCTFFNFTMLNIMGGKTSVLKRQ 132
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+ +IL+ TPGRL H L S ++ L+LDEADR+LD + D+ I+
Sbjct: 133 EWSTVSRANILIGTPGRLAQHQTENPMLDLSNLQMLILDEADRLLDPTFRSDVDT---IM 189
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
P Q++L SAT + +LA + +++P+ + A +T+ +P+ L Q +
Sbjct: 190 TNLTPDRQTLLFSATQNSTINQLARLCMRDPVILSTA------STSSGSTVPEQLLQSYA 243
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
V P + +L L +F+ C+ K++VF +TQ Y EL L +L
Sbjct: 244 VVPLEQKLDVLWTFLQSHCKK-------KIIVFFSTQKQVRYVYELFQQ-LRPYFRVMQL 295
Query: 691 HGSMSQSERTEVFKTFRSVKSG-VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
G+MSQ R +V+ F + +G VL+ T+VA RGLD P V W+VQY P DYVHRVG
Sbjct: 296 RGNMSQHRRFQVYDRFAATPTGCVLLATNVAERGLDFPTVHWVVQYDCPRQLDDYVHRVG 355
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDC-LQNLLSVKMEGDLSRLAD 808
RTAR G G ++ FL+PSE L++ L+ R + ++ K + + + +S + L+ D
Sbjct: 356 RTARFGKAGRAITFLLPSETLLIDLLKERGLELKLQKFPESKINHFVSTRSPAVLAAKPD 415
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSK-DLRHIFNFKQIHLGH 867
A A + +F +A L+ C G S R A + + +FN + L
Sbjct: 416 -----IAVAARSAF-TAYLR------DYCLGAGSPTRKSACPADIGIAAVFNPADLPLAA 463
Query: 868 FAKSFALRDAPSV 880
FA S L P +
Sbjct: 464 FAVSLGLPSVPEL 476
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
T++T +Q+++I+ IL G DV+V + TGSGKTLA+ IP++ +L R ++ DG A+
Sbjct: 34 GFTKMTDIQKMAIKHILLGSDVVVEAATGSGKTLAFLIPMLDRLYSSR--VTSLDGPVAI 91
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRLL 120
I+ PTRELA Q + + C F + + + + G +K ++ +IL+ TPGRL
Sbjct: 92 ILTPTRELARQISMVLKRFCTFFNFTMLNIMGGKTSVLKRQEWSTVSRANILIGTPGRLA 151
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H L S ++ L+LDEADR+LD + D+ I+ P Q++L SAT
Sbjct: 152 QHQTENPMLDLSNLQMLILDEADRLLDPTFRSDVD---TIMTNLTPDRQTLLFSAT 204
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 178 TPATCWCKHTET--LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP TE L S ++ L+LDEADR+LD + D+ I+ P Q++L S
Sbjct: 146 TPGRLAQHQTENPMLDLSNLQMLILDEADRLLDPTFRSDVD---TIMTNLTPDRQTLLFS 202
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + +LA + +++P+ + A +T+ +P+ L Q + V P + +L L +
Sbjct: 203 ATQNSTINQLARLCMRDPVILSTA------STSSGSTVPEQLLQSYAVVPLEQKLDVLWT 256
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
F+ C+ K++VF +TQ Y EL
Sbjct: 257 FLQSHCKK-------KIIVFFSTQKQVRYVYELF 283
>gi|71020871|ref|XP_760666.1| hypothetical protein UM04519.1 [Ustilago maydis 521]
gi|74700620|sp|Q4P5U4.1|DBP4_USTMA RecName: Full=ATP-dependent RNA helicase DBP4
gi|46100168|gb|EAK85401.1| hypothetical protein UM04519.1 [Ustilago maydis 521]
Length = 869
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 204/362 (56%), Gaps = 25/362 (6%)
Query: 413 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T +T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A++I
Sbjct: 79 TDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPSDGLGALVI 136
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA+Q E+ K+ S+ + GG+ +K EK R+ + I+IL+ATPGRLL H
Sbjct: 137 SPTRELAIQIFEVLRKIG-SYHTFSAGLVIGGKDVKQEKDRLSR-INILIATPGRLLQHM 194
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
T S V+ LVLDEADRILD G+ R + +E L + + Q++L SAT T V+
Sbjct: 195 DQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNR---QTMLFSATQTKRVKD 251
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQ 650
LA ++LQ+P + + + P L+QH+++ + +L L SFI KC
Sbjct: 252 LARLSLQDP------EYVAVREPENEGCTPRGLEQHYMLVELEKKLDLLFSFIRTHTKC- 304
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K LVFM++ + E L ++ LHG Q++R ++F F +
Sbjct: 305 --------KALVFMSSCRQVQFVHETFCK-LRPGVSLMALHGKQKQAKRLQIFTQFTKTQ 355
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+L TD+AARGLD P VDW++Q P Y+HRVGRTAR +G+SLLF++P++
Sbjct: 356 HALLFATDIAARGLDFPAVDWVIQLDVPEDVDTYIHRVGRTARYTAKGNSLLFVLPTQKA 415
Query: 771 LV 772
V
Sbjct: 416 FV 417
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T +T +Q S+ L G DVL ++TGSGKTLA+ IP+++ L R K DG+ A++I
Sbjct: 79 TDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEIL--YRRKWGPSDGLGALVI 136
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+Q E+ K+ S+ + GG+ +K EK R+ + I+IL+ATPGRLL H
Sbjct: 137 SPTRELAIQIFEVLRKIG-SYHTFSAGLVIGGKDVKQEKDRLSR-INILIATPGRLLQHM 194
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S V+ LVLDEADRILD G+ R + +E L + + Q++L SAT T
Sbjct: 195 DQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNR---QTMLFSATQT 246
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 22/145 (15%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +TL F S V+ LVLDEADRILD G+ R + +E L + + Q++L S
Sbjct: 186 TPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNR---QTMLFS 242
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V+ LA ++LQ+P + + + P L+QH+++ + +L L S
Sbjct: 243 ATQTKRVKDLARLSLQDP------EYVAVREPENEGCTPRGLEQHYMLVELEKKLDLLFS 296
Query: 296 FIL--GKCQNVNEDEESKMLVFMAT 318
FI KC K LVFM++
Sbjct: 297 FIRTHTKC---------KALVFMSS 312
>gi|297806553|ref|XP_002871160.1| hypothetical protein ARALYDRAFT_908458 [Arabidopsis lyrata subsp.
lyrata]
gi|297316997|gb|EFH47419.1| hypothetical protein ARALYDRAFT_908458 [Arabidopsis lyrata subsp.
lyrata]
Length = 593
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 247/494 (50%), Gaps = 45/494 (9%)
Query: 395 FPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
F + P + N+ E +N + T VQ +I + DV V + TGSGKTLA+ +P++
Sbjct: 16 FSDLEPPLSGNIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L+ + + VII PTREL+ Q + + + L GG ++K++
Sbjct: 76 EILRRSTSFPPKPHQVMGVIISPTRELSSQIYNVAQPFVSTLANVNSVLLVGGREVKADM 135
Query: 512 ARIRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
I + G ++L+ TPGRL D + E L F +E L+LDEADR+L+ G++R + + L
Sbjct: 136 KIIEEEGCNLLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRL 195
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTDSLVIPDSLKQ 627
KQ+ ++ L SAT T V+ LA L+NP++++ + S T+S P L
Sbjct: 196 PKQR---RTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQFTNSKT-PSGLHL 251
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-ENIA 686
+I + L ++ ++ + K++VF T DY +LS + ++I+
Sbjct: 252 EYIECEADKKSSQLVDLLI-------KNSDKKLIVFFMTCASVDYWGLVLSKIPALKSIS 304
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
+HG M Q+ R + +F SG L+CTDVAARGLD+P +D++VQY P + H
Sbjct: 305 LIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNH 364
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR+G G +++FL+P E VE ++ RR+ +EE K + +++ +
Sbjct: 365 RAGRTARLGRLGKAIVFLLPKEEAYVEFMRIRRVPLEERKCSEDASDVIPI--------- 415
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
SA ++ + + K + S+VR Y + IF +K++ +G
Sbjct: 416 ---------------IRSAAMKDRAVLEKGLKAFVSFVRAYKEHH--CYFIFRWKELEIG 458
Query: 867 HFAKSFALRDAPSV 880
A + L PS+
Sbjct: 459 KLAMGYGLLYLPSM 472
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + + VII PT
Sbjct: 40 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPT 99
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH 125
REL+ Q + + + L GG ++K++ I + G ++L+ TPGRL D +
Sbjct: 100 RELSSQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNLLIGTPGRLSDIMER 159
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E L F +E L+LDEADR+L+ G++R + + L KQ+ ++ L SAT T
Sbjct: 160 MEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQR---RTGLFSATQT 209
>gi|451999043|gb|EMD91506.1| hypothetical protein COCHEDRAFT_1175511 [Cochliobolus
heterostrophus C5]
Length = 813
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 214/389 (55%), Gaps = 29/389 (7%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTL++ IP+++ L ++ + G+ A+I+ P
Sbjct: 72 MTDIQAKAIPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HVGPDAGLGALILSP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ K+ + L GG+ +++E+ + K ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLQAEREALTK-MNILVATPGRMLQHLSQ 189
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G++RD+ +E L K++ Q++L SAT + V LA
Sbjct: 190 TAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKER---QTLLFSATQSKKVSDLA 246
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H D P L Q++I+ P + +L L SFI
Sbjct: 247 RLSLQDP------EYVSVH-AEDKSATPKGLTQNYIICPLEEKLDTLWSFIQAS------ 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
++SK+L F ++ + E + I +HG Q R + F S K L
Sbjct: 294 -KKSKILCFFSSAKTVRFVYESFRH-MQPGIPLLHIHGRQKQGARLDTTAKFSSAKHSCL 351
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VD+++Q P Y+HRVGRTAR EG +LFL PSE + +++
Sbjct: 352 FATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEEGMLK 411
Query: 774 ELQNRRIRIEEIK--------LKDCLQNL 794
L+ +++ IE I +KD LQN+
Sbjct: 412 RLEAKKVPIEMINVRQKKRQSIKDQLQNM 440
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTL++ IP+++ L ++ + G+ A+I+ P
Sbjct: 72 MTDIQAKAIPLALKGHDILGAAKTGSGKTLSFIIPVLENLYRLQ-HVGPDAGLGALILSP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ + L GG+ +++E+ + K ++ILVATPGR+L H
Sbjct: 131 TRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLQAEREALTK-MNILVATPGRMLQHLSQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRILD G++RD+ +E L K++ Q++L SAT
Sbjct: 190 TAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKER---QTLLFSAT 237
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T F+ ++ LVLDEADRILD G++RD+ +E L K++ Q++L S
Sbjct: 179 TPGRMLQHLSQTAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKER---QTLLFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++LQ+P + +H D P L Q++I+ P + +L L S
Sbjct: 236 ATQSKKVSDLARLSLQDP------EYVSVH-AEDKSATPKGLTQNYIICPLEEKLDTLWS 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI ++SK+L F ++
Sbjct: 289 FIQAS-------KKSKILCFFSS 304
>gi|357134923|ref|XP_003569064.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like
[Brachypodium distachyon]
Length = 644
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 252/495 (50%), Gaps = 50/495 (10%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
P + P + K L G + T VQ +I +L DV V + TGSGKTLA+ +P+++ L+
Sbjct: 26 PALSPEVVKALRRG-GFRRCTPVQAATIPLLLSHKDVAVDAATGSGKTLAFVVPVVEMLR 84
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
+ P + + +II PTREL+ Q + + + L GG +K+E ++
Sbjct: 85 RL-PSPPKPHQVLGIIISPTRELSSQIYNVAQPFFATLKGVSSILLVGGLDIKAELQKVE 143
Query: 516 K-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK 574
+ G +ILV TPG+L D + +TL++ +E L+LDEADR+LD G+++ I + L K +
Sbjct: 144 EEGANILVGTPGKLFDIMERLDTLEYKNLEILILDEADRLLDMGFQKQITSIISKLPKLR 203
Query: 575 PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV--------IPDSLK 626
++ L SAT T AV+ LA L+NP+++ T++ ++ V P L+
Sbjct: 204 ---RTGLFSATQTEAVEELAKAGLRNPVRVQV--KTEVKPSSKDAVQQDLGLSKTPLGLR 258
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV-LGENI 685
+++ + L F++ +N + K++V+ AT DY +L + L +
Sbjct: 259 LEYMICEASKKSSQLVDFLV---RNTGK----KIMVYFATCACVDYWAVVLPMLNLLKGS 311
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
HG M Q R + +F ++ SG+L+CTDVAARGLD+P VD IVQY P ++
Sbjct: 312 PIIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFI 371
Query: 746 HRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
HR GRTAR EG +++FL+P+E VE L+ R + + E ++C +++ + +
Sbjct: 372 HRAGRTARYDQEGDAIVFLLPTEDTYVEFLKLRGVPLME---RECSTDIVDIVPQ----- 423
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
+A L+ + + + + S+VR Y + +IF +K + +
Sbjct: 424 ----------------IRAAALEDRNIMEKGLRAFVSFVRSYKEHH--CSYIFRWKGLEI 465
Query: 866 GHFAKSFALRDAPSV 880
G A + L PS+
Sbjct: 466 GKLAMEYGLLQIPSM 480
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
+ T VQ +I +L DV V + TGSGKTLA+ +P+++ L+ + P + + +II
Sbjct: 43 RCTPVQAATIPLLLSHKDVAVDAATGSGKTLAFVVPVVEMLRRL-PSPPKPHQVLGIIIS 101
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHC 123
PTREL+ Q + + + L GG +K+E ++ + G +ILV TPG+L D
Sbjct: 102 PTRELSSQIYNVAQPFFATLKGVSSILLVGGLDIKAELQKVEEEGANILVGTPGKLFDIM 161
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ +TL++ +E L+LDEADR+LD G+++ I + L K + ++ L SAT T A
Sbjct: 162 ERLDTLEYKNLEILILDEADRLLDMGFQKQITSIISKLPKLR---RTGLFSATQTEA 215
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 188 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAG 247
+TL++ +E L+LDEADR+LD G+++ I + L K + ++ L SAT T AV+ LA
Sbjct: 165 DTLEYKNLEILILDEADRLLDMGFQKQITSIISKLPKLR---RTGLFSATQTEAVEELAK 221
Query: 248 MTLQNPIQIDAADSTDIHNTTDSLV--------IPDSLKQHFIVTPPKLRLVALASFILG 299
L+NP+++ T++ ++ V P L+ +++ + L F++
Sbjct: 222 AGLRNPVRVQV--KTEVKPSSKDAVQQDLGLSKTPLGLRLEYMICEASKKSSQLVDFLV- 278
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
+N + K++V+ AT DY +L
Sbjct: 279 --RNTGK----KIMVYFATCACVDYWAVVL 302
>gi|307103042|gb|EFN51307.1| hypothetical protein CHLNCDRAFT_28229 [Chlorella variabilis]
Length = 518
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 259/506 (51%), Gaps = 60/506 (11%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGS 440
P ++ A ++E P I + K+ L E + +T VQ+ ++ L G DVL ++TGS
Sbjct: 59 PQQPSVAAAKRFDELP-ISEYSKQGLREAKYFS-LTAVQRAALPHALCGRDVLGAAKTGS 116
Query: 441 GKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSW 500
GKTLA+ +P+++KL R + S+ DG+ A++I PTRELALQ + K+ + +
Sbjct: 117 GKTLAFLLPVVEKL--YRARWSKLDGLGALVISPTRELALQIFDELRKVGRRHDFSA-GL 173
Query: 501 LTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYE 560
L GG+ +K E+AR+ G++ILV TPGRLL H T +++ LVLDEADRILD G+
Sbjct: 174 LIGGKDVKEEQARVH-GMNILVCTPGRLLQHMDETPGFDAGQLQVLVLDEADRILDMGFS 232
Query: 561 RDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP----IQIDAADSTDIHNTT 616
+ + + +Q+ Q++L SAT T +V+ LA ++L++P + +AA T
Sbjct: 233 ATLNAIVANIPRQR---QTLLFSATQTKSVKDLARLSLKDPEYISVHAEAAAPT------ 283
Query: 617 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 676
P L+Q ++V +L L SFI ++K +VF++T + E
Sbjct: 284 -----PLRLQQAYMVCELPQKLDILWSFI-------KTHLKAKTIVFVSTCKQVRFLFEA 331
Query: 677 LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
L + LHG M+Q +R VF F K+ VL TD+AARGLD P +DW+VQ
Sbjct: 332 FRK-LRPGVPLRALHGKMNQYKRMGVFYEFCEAKAMVLFATDIAARGLDFPTIDWVVQAD 390
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLL 795
P Y+HRVGRTAR G LL L+PSE + ++ +L+ ++ ++++K +
Sbjct: 391 CPEDVPAYIHRVGRTARYMSSGKGLLLLVPSEKEGMLAQLEEAKVPMKQLKHNPSKVQPV 450
Query: 796 SVKMEGDLSRLADGNV-ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDL 854
+ ++ LS+ DG + E A AL S LQ
Sbjct: 451 APALQALLSK--DGELKEVAQRALVSYLRSVFLQPN------------------------ 484
Query: 855 RHIFNFKQIHLGHFAKSFALRDAPSV 880
R +F+ Q+ FA S L AP +
Sbjct: 485 RKVFDVTQLPAAEFAYSMGLPTAPKL 510
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ+ ++ L G DVL ++TGSGKTLA+ +P+++KL R + S+ DG+ A++I P
Sbjct: 91 LTAVQRAALPHALCGRDVLGAAKTGSGKTLAFLLPVVEKL--YRARWSKLDGLGALVISP 148
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELALQ + K+ + + L GG+ +K E+AR+ G++ILV TPGRLL H
Sbjct: 149 TRELALQIFDELRKVGRRHDFSA-GLLIGGKDVKEEQARVH-GMNILVCTPGRLLQHMDE 206
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T +++ LVLDEADRILD G+ + + + +Q+ Q++L SAT T
Sbjct: 207 TPGFDAGQLQVLVLDEADRILDMGFSATLNAIVANIPRQR---QTLLFSATQT 256
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F +++ LVLDEADRILD G+ + + + +Q+ Q++L S
Sbjct: 196 TPGRLLQHMDETPGFDAGQLQVLVLDEADRILDMGFSATLNAIVANIPRQR---QTLLFS 252
Query: 236 ATLTPAVQRLAGMTLQNP----IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 291
AT T +V+ LA ++L++P + +AA T P L+Q ++V +L
Sbjct: 253 ATQTKSVKDLARLSLKDPEYISVHAEAAAPT-----------PLRLQQAYMVCELPQKLD 301
Query: 292 ALASFILGKCQNVNEDEESKMLVFMAT 318
L SFI ++K +VF++T
Sbjct: 302 ILWSFI-------KTHLKAKTIVFVST 321
>gi|297796361|ref|XP_002866065.1| hypothetical protein ARALYDRAFT_495573 [Arabidopsis lyrata subsp.
lyrata]
gi|297311900|gb|EFH42324.1| hypothetical protein ARALYDRAFT_495573 [Arabidopsis lyrata subsp.
lyrata]
Length = 741
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 260/500 (52%), Gaps = 57/500 (11%)
Query: 390 TSYEEFPGIHPFM--------KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSG 441
T + + G+ F K+ L + + +T VQ +I L G D+L ++TGSG
Sbjct: 62 TVFSRYAGVRKFAQLPISDKTKRGLKDAKYV-DMTDVQSAAIPHALCGRDILGAARTGSG 120
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
KTLA+ IPI++KL R + S +DG+ +II PTRELA QT + K+ K + +
Sbjct: 121 KTLAFVIPILEKLH--RERWSPEDGVGCIIISPTRELAAQTFSVLNKVGKFHKFSAGLLI 178
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
G E + EK R+ + ++ILV PGRLL H T + S ++ L+LDEADR+LD ++
Sbjct: 179 GGREGVDVEKERVNE-MNILVCAPGRLLQHMDETPNFECSHLQILILDEADRVLDSAFKG 237
Query: 562 DIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVI 621
+ + L K + Q++L SAT T V+ LA ++L++P I +H +
Sbjct: 238 QLDPIISQLPKHR---QTLLFSATQTKKVKDLARLSLRDPEYIS------VHEEAPT-AT 287
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
P SL Q ++ P + +L L SFI ++N S++LVF++T+ + E + L
Sbjct: 288 PASLMQTVMIVPVEKKLDMLWSFI---KTHLN----SRILVFLSTKKQVKFVHEAFNK-L 339
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL-PLVDWIVQYTAPSS 740
I LHG MSQ +R V+ F +S VL CTDV ARGLD VDW+VQ P
Sbjct: 340 RPGIPLKSLHGKMSQEKRMGVYSQFIERQS-VLFCTDVLARGLDFDKAVDWVVQVDCPED 398
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKME 800
Y+HRVGRTAR +G SLLFL PSE K++E+LQ ++ ++ IK + Q L V
Sbjct: 399 VASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPVKLIKANN--QKLQEV--- 453
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
SRL AL + + L A + + +++R + + + + IF+
Sbjct: 454 ---SRL--------LAALLVKYPD-------LQGVAQRAFITYLR--SIHKRRDKEIFDV 493
Query: 861 KQIHLGHFAKSFALRDAPSV 880
++ + +F+ S L P +
Sbjct: 494 SKLSIENFSASLGLPMTPRI 513
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L G D+L ++TGSGKTLA+ IPI++KL R + S +DG+ +II P
Sbjct: 94 MTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLH--RERWSPEDGVGCIIISP 151
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT + K+ K + + G E + EK R+ + ++ILV PGRLL H
Sbjct: 152 TRELAAQTFSVLNKVGKFHKFSAGLLIGGREGVDVEKERVNE-MNILVCAPGRLLQHMDE 210
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + S ++ L+LDEADR+LD ++ + + L K + Q++L SAT T
Sbjct: 211 TPNFECSHLQILILDEADRVLDSAFKGQLDPIISQLPKHR---QTLLFSATQT 260
>gi|15239115|ref|NP_196164.1| DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana]
gi|75334017|sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18
gi|10176757|dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332003492|gb|AED90875.1| DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana]
Length = 593
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 247/494 (50%), Gaps = 45/494 (9%)
Query: 395 FPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
F + P + ++ E +N + T VQ +I + DV V + TGSGKTLA+ +P++
Sbjct: 16 FSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L+ + + VII PTREL+ Q + + + L GG ++K++
Sbjct: 76 EILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADM 135
Query: 512 ARIRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
I + G ++L+ TPGRL D + E L F +E L+LDEADR+L+ G++R + + L
Sbjct: 136 KIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRL 195
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTDSLVIPDSLKQ 627
KQ+ ++ L SAT T V+ LA L+NP++++ + S T+S P L
Sbjct: 196 PKQR---RTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKT-PSGLHL 251
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-ENIA 686
++ + L ++ ++ + K++VF T DY +LS + ++I+
Sbjct: 252 EYMECEADKKSSQLVDLLI-------KNSDKKLIVFFMTCASVDYWGLVLSKIPALKSIS 304
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
+HG M Q+ R + +F SG L+CTDVAARGLD+P +D++VQY P + H
Sbjct: 305 LIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNH 364
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR+G +G +++FL+P E VE ++ RR+ +EE K + +++ +
Sbjct: 365 RAGRTARLGRQGRAIVFLLPKEEAYVEFMRIRRVPLEERKCSEDASDVIPI--------- 415
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
SA ++ + + K + S+VR Y + IF +K + +G
Sbjct: 416 ---------------IRSAAMKDRAVMEKGLKAFVSFVRAYKEHH--CSFIFRWKDLEIG 458
Query: 867 HFAKSFALRDAPSV 880
A + L PS+
Sbjct: 459 KLAMGYGLLYLPSM 472
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + + VII PT
Sbjct: 40 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPT 99
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH 125
REL+ Q + + + L GG ++K++ I + G ++L+ TPGRL D +
Sbjct: 100 RELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMER 159
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E L F +E L+LDEADR+L+ G++R + + L KQ+ ++ L SAT T
Sbjct: 160 MEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQR---RTGLFSATQT 209
>gi|225680133|gb|EEH18417.1| ATP-dependent RNA helicase dbp4 [Paracoccidioides brasiliensis
Pb03]
Length = 816
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 257/488 (52%), Gaps = 57/488 (11%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T++Q ++ L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHSFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T V LA
Sbjct: 188 TAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSATQTQKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P I +H S P L+Q++IVTP +L L SFI +
Sbjct: 245 RLSLRDPEYIS------VHEAASS-ATPAKLQQNYIVTPLPEKLDTLWSFIRSSLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I+ LHG Q R ++ K F K L
Sbjct: 294 ---SKIMVFFSSGKQVRFVYESFRH-MQPGISLLHLHGRQKQGARVDITKKFSVAKHACL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+AARGLD P VDW++Q P + Y+HR GRTAR G ++LFL PS E +++
Sbjct: 350 FATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVLFLEPSEEAAMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE+I ++ Q + +++ M F+ L K L
Sbjct: 410 RLEQKKIPIEKINVRTKKQQSIKHQLQ------------------NMCFKDPAL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV--ISGIGKPKNKE 891
K + S+V+ + + + + +F K + L +A S L AP + I G E
Sbjct: 449 --GQKAFISYVK--SIHVQKDKEVFVVKDLPLEAYAASLGLPGAPRIKFIKG-------E 497
Query: 892 ELKNKKMA 899
++K +K A
Sbjct: 498 DIKKRKNA 505
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T++Q ++ L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + ++ + GG+ ++ E+ R+ + ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHSFSA-GLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++++ LVLDEADRI+D G++ + +E L K++ Q++L SAT T
Sbjct: 188 TAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFSATQT 237
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F ++++ LVLDEADRI+D G++ + +E L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L++P I +H S P L+Q++IVTP +L L S
Sbjct: 234 ATQTQKVSDLARLSLRDPEYI------SVHEAASS-ATPAKLQQNYIVTPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIMVFFSS 302
>gi|242051997|ref|XP_002455144.1| hypothetical protein SORBIDRAFT_03g005040 [Sorghum bicolor]
gi|241927119|gb|EES00264.1| hypothetical protein SORBIDRAFT_03g005040 [Sorghum bicolor]
Length = 644
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/499 (32%), Positives = 255/499 (51%), Gaps = 59/499 (11%)
Query: 396 PGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQ 455
P + P + + L+ G + T VQ +I +L DV V + TGSGKTLA+ +P+++ L+
Sbjct: 28 PALSPEVVEALDRG-GFQRCTPVQAAAIPHLLSHKDVAVDAATGSGKTLAFIVPVVEILR 86
Query: 456 EM--RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKAR 513
RPK + A+II PTREL+ Q + + + L GG +K+E +
Sbjct: 87 RRSSRPKSHE---VLALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKK 143
Query: 514 IRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKK 572
+ + G +ILV TPG+L D HT+ L++ +E L+LDEADR+LD G+++ I L +L K
Sbjct: 144 VEEEGANILVGTPGKLCD-IMHTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPK 202
Query: 573 QKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTT--------DSLVIPDS 624
+ ++ L SAT T AV L+ L+NPI+++ T+ +T+ S P
Sbjct: 203 LR---RTGLFSATQTKAVADLSKAGLRNPIRVEV--KTEAKSTSKDAGQQELGSSKTPLG 257
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHT---ELLSTVL 681
L+ +++ + L F++ QN + K++V+ AT DY L++++
Sbjct: 258 LRLEYMICEASKKSSQLVDFLV---QNSGK----KIMVYFATCACVDYWAVVLPLINSLK 310
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
G I + HG M Q R + +F ++ SGVL+CTDVAARGLD+P VD IVQY P
Sbjct: 311 GSPIIAY--HGKMKQGLREKALASFSALSSGVLVCTDVAARGLDIPSVDLIVQYDPPQDP 368
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
++HR GRTAR EG +++FL+P E VE L+ R + + E ++C N V +
Sbjct: 369 NVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKLRGVPLTE---RECPANTDDVIQQ- 424
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
SA L+ + + + + S+VR Y + +IF +K
Sbjct: 425 --------------------IRSAALEDRNVMEKGLRAFVSFVRAYKEHH--CSYIFRWK 462
Query: 862 QIHLGHFAKSFALRDAPSV 880
+ +G A + L PS+
Sbjct: 463 DLEIGKLAMEYGLLQIPSM 481
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVI 62
+ T VQ +I +L DV V + TGSGKTLA+ +P+++ L+ RPK + A+I
Sbjct: 45 RCTPVQAAAIPHLLSHKDVAVDAATGSGKTLAFIVPVVEILRRRSSRPKSHE---VLALI 101
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLD 121
I PTREL+ Q + + + L GG +K+E ++ + G +ILV TPG+L D
Sbjct: 102 ISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPGKLCD 161
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
HT+ L++ +E L+LDEADR+LD G+++ I L +L K + ++ L SAT T A
Sbjct: 162 -IMHTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLR---RTGLFSATQTKAV 217
Query: 182 C 182
Sbjct: 218 A 218
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 24/173 (13%)
Query: 161 LKKQKPQFQSILLSATLTPAT-CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 219
LKK + + +IL+ TP C HT+ L++ +E L+LDEADR+LD G+++ I L
Sbjct: 141 LKKVEEEGANILVG---TPGKLCDIMHTDALEYKNLEILILDEADRLLDMGFQKHINFIL 197
Query: 220 EILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTT--------DSL 271
+L K + ++ L SAT T AV L+ L+NPI+++ T+ +T+ S
Sbjct: 198 SMLPKLR---RTGLFSATQTKAVADLSKAGLRNPIRVEV--KTEAKSTSKDAGQQELGSS 252
Query: 272 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 324
P L+ +++ + L F++ QN + K++V+ AT DY
Sbjct: 253 KTPLGLRLEYMICEASKKSSQLVDFLV---QNSGK----KIMVYFATCACVDY 298
>gi|325094386|gb|EGC47696.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus H88]
Length = 811
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 247/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPYALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T V LA
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQTKKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H T S P L+Q++I+TP +L L SFI +
Sbjct: 245 RLSLRDPEYVS------VHETAAS-ATPAKLQQNYIITPLPEKLDTLWSFIRSSLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I LHG Q R ++ K F + K L
Sbjct: 294 ---SKIIVFFSSGKQVRFVYESFRH-MRPGIPLLHLHGRQKQGARVDITKKFSAAKYACL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+AARGLD P VDW++Q P + Y+HR GRTAR G ++LFL PS E +++
Sbjct: 350 FATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVLFLEPSEEAGMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE+I ++ Q + +++ M F+ L K L
Sbjct: 410 RLEQKKIPIEKINVRSKKQQSIKNQLQ------------------NMCFKDPSL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + + + + +F K + L +A S L AP +
Sbjct: 449 --GQKAFISYVK--SIHVQRDKEVFVVKDLPLQEYAASLGLPGAPRI 491
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPYALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQT 237
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + ++ L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L++P + +H T S P L+Q++I+TP +L L S
Sbjct: 234 ATQTKKVSDLARLSLRDPEYV------SVHETAAS-ATPAKLQQNYIITPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIIVFFSS 302
>gi|402888051|ref|XP_003907390.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Papio anubis]
Length = 607
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 261/511 (51%), Gaps = 57/511 (11%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVSLHPRVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ K LVF +T +Y+ + L ++ +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVFFSTCACVEYYGKALEALV-K 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKS-------GVLICTDVAARGLDLPLVDWIVQYT 736
+ +HG M + +R ++F FR ++ G L+CTDV ARG+D+P V+W++QY
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQRWVSFIGVGFLVCTDVMARGIDIPEVNWVLQYD 351
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLL 795
PS+++ +VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+ +LL
Sbjct: 352 PPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRNTVDLL 411
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
+++ A A + FE + K + S+V+ YA + +L
Sbjct: 412 P-------------KLKSMALADRAVFEKGM-----------KAFVSYVQAYAKHECNL- 446
Query: 856 HIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
IF K + A+ FAL P + GK
Sbjct: 447 -IFRLKDLDFASLAQGFALLRMPKMPELRGK 476
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 138/325 (42%), Gaps = 70/325 (21%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A+II P
Sbjct: 32 MTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITP 90
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q E+ + K F GG + R ++ G +I+VATPGRL D +
Sbjct: 91 TRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFR 150
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
K E L L R LD
Sbjct: 151 R-------KAEGLDLASCVRSLDV------------------------------------ 167
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+
Sbjct: 168 -------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVEN 211
Query: 245 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 304
L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 212 LVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL------- 262
Query: 305 NEDEESKMLVFMATQDMADYHTELL 329
++ K LVF +T +Y+ + L
Sbjct: 263 RNHKQEKHLVFFSTCACVEYYGKAL 287
>gi|225558597|gb|EEH06881.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus G186AR]
Length = 810
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 247/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T V LA
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQTKKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H T S P L+Q++I+TP +L L SFI +
Sbjct: 245 RLSLRDPEYVS------VHETAAS-ATPAKLQQNYIITPLPEKLDTLWSFIRSSLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I LHG Q R ++ K F + K L
Sbjct: 294 ---SKIIVFFSSGKQVRFVYESFRH-MRPGIPLLHLHGRQKQGARVDITKKFSAAKYSCL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+AARGLD P VDW++Q P + Y+HR GRTAR G ++LFL PS E +++
Sbjct: 350 FATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVLFLEPSEEAGMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE+I ++ Q + +++ M F+ L K L
Sbjct: 410 RLEQKKIPIEKINVRSKKQQSIKNQLQ------------------NMCFKDPSL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + + + + +F K + L +A S L AP +
Sbjct: 449 --GQKAFISYVK--SIHVQRDKEVFVVKDLPLQEYAASLGLPGAPRI 491
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQT 237
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + ++ L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L++P + +H T S P L+Q++I+TP +L L S
Sbjct: 234 ATQTKKVSDLARLSLRDPEYV------SVHETAAS-ATPAKLQQNYIITPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIIVFFSS 302
>gi|66824287|ref|XP_645498.1| hypothetical protein DDB_G0271708 [Dictyostelium discoideum AX4]
gi|75013525|sp|Q869P0.2|DDX31_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx31; AltName:
Full=DEAD box protein 31
gi|60473603|gb|EAL71544.1| hypothetical protein DDB_G0271708 [Dictyostelium discoideum AX4]
Length = 908
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 180/299 (60%), Gaps = 25/299 (8%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
+NL M + T +Q+ SI PIL G D LV++QTGSGKTL+Y IP++QKL E R ++R
Sbjct: 220 RNLVGHMKHEKPTHIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKLTEQR--VTR 277
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG Y VII PTREL+ Q E KL K F WIVP + GGE +EKARIRKGI+ILVA
Sbjct: 278 SDGCYCVIITPTRELSSQIYEELQKLLKPFYWIVPGIIMGGENRSAEKARIRKGINILVA 337
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKPQF--QS 579
TPGRLLDH ++T++ ++ +LDEAD++LD G+E+D+ + +L KK+ +F Q+
Sbjct: 338 TPGRLLDHLQNTQSFPTDNIKWCILDEADKLLDLGFEKDVTTIINLLDSKKRTMKFKRQN 397
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS--------LVIPDSLKQHFIV 631
IL+SATL+ + RLA ++L +P+ I DS + + L P L Q ++
Sbjct: 398 ILVSATLSEGISRLASLSLTSPVYI-GLDSKVLEKGENPFQAAEKEMLQAPKQLDQFYVE 456
Query: 632 TPPKLRLVALASFILGKCQNV----------NEDEESKMLVFMATQDMADYHTELLSTV 680
K RL +L +FI K N+ N SKM+VF ++ D D+H + S +
Sbjct: 457 VESKERLTSLIAFIRWKTSNITIDKGDVASGNSSANSKMIVFFSSCDSVDFHHYMFSNM 515
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 181/341 (53%), Gaps = 70/341 (20%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ SI PIL G D LV++QTGSGKTL+Y IP++QKL E R ++R DG Y VII PT
Sbjct: 232 THIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKLTEQR--VTRSDGCYCVIITPT 289
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
REL+ Q E KL K F WIVP + GGE +EKARIRKGI+ILVATPGRLLDH ++T
Sbjct: 290 RELSSQIYEELQKLLKPFYWIVPGIIMGGENRSAEKARIRKGINILVATPGRLLDHLQNT 349
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL--KKQKPQF--QSILLSATLTPATC 182
++ ++ +LDEAD++LD G+E+D+ + +L KK+ +F Q+IL+SATL+
Sbjct: 350 QSFPTDNIKWCILDEADKLLDLGFEKDVTTIINLLDSKKRTMKFKRQNILVSATLSEGIS 409
Query: 183 WCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAV 242
+L + ++ LD ++L++G
Sbjct: 410 ---RLASLSLTSPVYIGLD--SKVLEKG-------------------------------- 432
Query: 243 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 302
+NP Q AA+ + L P L Q ++ K RL +L +FI K
Sbjct: 433 --------ENPFQ--AAEK-------EMLQAPKQLDQFYVEVESKERLTSLIAFIRWKTS 475
Query: 303 NV----------NEDEESKMLVFMATQDMADYHTELLSTKK 333
N+ N SKM+VF ++ D D+H + S K
Sbjct: 476 NITIDKGDVASGNSSANSKMIVFFSSCDSVDFHHYMFSNMK 516
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 145/239 (60%), Gaps = 10/239 (4%)
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
++ FKLHG + Q RT+ F F++ +G+L+ TDV+ARGLDLP V+WIVQY S + D
Sbjct: 603 SVPIFKLHGELDQQTRTKTFFDFKNSPNGILLTTDVSARGLDLPSVNWIVQYDPCSDTKD 662
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
Y+HR+GRTAR+G++G SLLFL+PSE K ++ L + ++E+K+ LQ+L +G L
Sbjct: 663 YIHRIGRTARLGNQGCSLLFLLPSEKKYIDHLAKFNVSVKEMKVTTILQSLFYTS-DGQL 721
Query: 804 SRLADGN-VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
+ + + +E+ LQ+ FE ++ A Y S++R YA++ D++ IF+
Sbjct: 722 KKTSKSSQLESQVHDLQLLFERFLIYDSKAKEMARCAYQSFLRSYATHKADVKSIFHISY 781
Query: 863 IHLGHFAKSFALRDAPSVI----SGI----GKPKNKEELKNKKMAINKEKSFKQRGNFS 913
+HLGH +KSFALR+ P+ + +GI K E+ K+ A K K++K FS
Sbjct: 782 LHLGHVSKSFALRETPTELNKMSAGIKGAKAAKKGDEDTLQKQTADFKMKNYKSVNEFS 840
>gi|401839497|gb|EJT42696.1| HCA4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 770
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 276/553 (49%), Gaps = 55/553 (9%)
Query: 350 IPKKTEVKSGPISSLFQNNPD-IPNVPTR--RLKP-VSEALFAPTSYEEFPGIHPFMKKN 405
+ KK +V + +L Q + I N+ T+ P +++A F +++ P P +K
Sbjct: 1 MAKKNKVNTSQRKTLRQKEDEYIENLKTKIDEYNPKITKAKF----FKDLPISDPTLK-G 55
Query: 406 LNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKD 465
L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + D
Sbjct: 56 LRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFD 112
Query: 466 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
G+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TP
Sbjct: 113 GLGALIISPTRELAMQIYEVLTKIG-SRTSFSAGLVIGGKDVKFELERISR-INILIGTP 170
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GR+L H L S ++ LVLDEADR LD G+++ + ++ L P Q++L SAT
Sbjct: 171 GRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVDTLS---PSRQTLLFSAT 227
Query: 586 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
+ +V LA ++L + + D D + P++L+Q +I P +L L SFI
Sbjct: 228 QSQSVADLARLSLTDYKTVGTYDVMD-GSVNKGPSTPETLQQSYIEVPLADKLDILFSFI 286
Query: 646 LG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
KC KM+VF+++ + E + I+ LHG Q RTE
Sbjct: 287 KSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMHLHGRQKQRARTETL 336
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TDV ARG+D P VDW+VQ P Y+HRVGR AR G +G SL+
Sbjct: 337 DKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCARYGKKGKSLIM 396
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L P E +E +R++I +I + S+L + + Q+ +
Sbjct: 397 LTPQE----QETFLKRLQIRKI----------------EPSKLNIKQSKKKSIKPQL--Q 434
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + + L K + S+VR + Y + + +F F ++ FA S L AP + +
Sbjct: 435 SLLFKDPELKYLGQKAFISYVR--SIYVQKDKEVFKFDELSTEEFAYSLGLPGAPKIKMK 492
Query: 883 GIGKPKNKEELKN 895
G+ +E KN
Sbjct: 493 GMKTIDQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 107/172 (62%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SRTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + ++ L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVDTL---SPSRQTLLFSAT 227
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + ++ L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVDTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTYDVMD-GSVNKGPSTPETLQQSYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|240275036|gb|EER38551.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus H143]
Length = 811
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 247/467 (52%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPYALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T V LA
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQTKKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H T S P L+Q++I+TP +L L SFI +
Sbjct: 245 RLSLRDPEYVS------VHETAAS-ATPAKLQQNYIITPLPEKLDTLWSFIRSSLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I LHG Q R ++ K F + K L
Sbjct: 294 ---SKIIVFFSSGKQVRFVYESFRH-MRPGIPLLHLHGRQKQGARVDITKKFSAAKYACL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+AARGLD P VDW++Q P + Y+HR GRTAR G ++LFL PS E +++
Sbjct: 350 FATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVLFLEPSEEAGMLK 409
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I IE+I ++ Q + +++ M F+ L K L
Sbjct: 410 RLEQKKIPIEKINVRSKKQQSIKNQLQ------------------NMCFKDPSL--KYL- 448
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+V+ + + + + +F K + L +A S L AP +
Sbjct: 449 --GQKAFISYVK--SIHVQRDKEVFVVKDLPLQEYAASLGLPGAPRI 491
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPYALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQT 237
Score = 63.2 bits (152), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + ++ L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L++P + +H T S P L+Q++I+TP +L L S
Sbjct: 234 ATQTKKVSDLARLSLRDPEYV------SVHETAAS-ATPAKLQQNYIITPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIIVFFSS 302
>gi|268565311|ref|XP_002639404.1| Hypothetical protein CBG03992 [Caenorhabditis briggsae]
Length = 750
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 243/466 (52%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DV+ ++TGSGKTLA IPI++ L R K S + G+ A++I PT
Sbjct: 100 TEIQRDTIAHSLTGADVVGAAKTGSGKTLALVIPILEAL--WRVKWSPEYGLGALVISPT 157
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELALQT + K + + GG ++ E+ RI GI+I+V TPGRLL H
Sbjct: 158 RELALQTFSTINAVGKHHGFSC-GLVIGGSEVAFERNRI-SGINIIVCTPGRLLQHMDEN 215
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
E + ++ LVLDEADR+LD G+ + + + L ++ Q++L SAT T V+ L+
Sbjct: 216 EQMNCDSLQILVLDEADRMLDMGFSKQLNSIINNLPAER---QTLLFSATQTRNVKDLSR 272
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
+ +P+ + +H + + PD+LKQ ++V ++++ L SFI
Sbjct: 273 VCTNDPVFVS------VHENS-AAATPDNLKQSYVVVEEEIKINTLWSFIEAH------- 318
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
++ K LVF+++ A + TE+ S L + L G+M+Q +R E F + K+ VLI
Sbjct: 319 KKKKSLVFVSSCKQARFLTEVFSQ-LRPGLPVMGLWGTMNQKKRIETFTKYDESKAAVLI 377
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEE 774
TDVA+RGLD +DW++Q P+ DY+HRVGR+AR+ G+SLL + S E ++ +
Sbjct: 378 ATDVASRGLDFERIDWVIQVDCPAQIDDYIHRVGRSARMEESGNSLLMVTSSQEEAMISK 437
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L I IEE+K+ A T +++ + + + + L
Sbjct: 438 LAKHSIPIEELKIH-----------------------PDAMTDVRLKLRAILAESQELKE 474
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A K +++R + Y+ + IFN I A SF L P +
Sbjct: 475 YAQKSIVAYLR--SIYTMKDKKIFNVNTIDAAALADSFGLVSVPRI 518
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DV+ ++TGSGKTLA IPI++ L R K S + G+ A++I PT
Sbjct: 100 TEIQRDTIAHSLTGADVVGAAKTGSGKTLALVIPILEAL--WRVKWSPEYGLGALVISPT 157
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELALQT + K + + GG ++ E+ RI GI+I+V TPGRLL H
Sbjct: 158 RELALQTFSTINAVGKHHGFSC-GLVIGGSEVAFERNRI-SGINIIVCTPGRLLQHMDEN 215
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E + ++ LVLDEADR+LD G+ + + + L ++ Q++L SAT T
Sbjct: 216 EQMNCDSLQILVLDEADRMLDMGFSKQLNSIINNLPAER---QTLLFSATQT 264
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
E + ++ LVLDEADR+LD G+ + + + L ++ Q++L SAT T V+ L
Sbjct: 214 ENEQMNCDSLQILVLDEADRMLDMGFSKQLNSIINNLPAER---QTLLFSATQTRNVKDL 270
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
+ + +P+ + +H + + PD+LKQ ++V ++++ L SFI
Sbjct: 271 SRVCTNDPVFV------SVHENS-AAATPDNLKQSYVVVEEEIKINTLWSFIEAH----- 318
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
++ K LVF+++ A + TE+ S
Sbjct: 319 --KKKKSLVFVSSCKQARFLTEVFS 341
>gi|345323103|ref|XP_001507486.2| PREDICTED: ATP-dependent RNA helicase DDX55-like [Ornithorhynchus
anatinus]
Length = 1090
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 240/467 (51%), Gaps = 50/467 (10%)
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
++ DV + TGSGKTLA+ IPI+Q L K+ +K + A+II PTRELA+Q E+
Sbjct: 153 FMNNKDVAAEAVTGSGKTLAFVIPILQILLRREEKL-KKTQVGAIIITPTRELAIQIDEV 211
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRLLDHCKH-TETLKFSK- 542
K F L GG + + + +G +I+VATPGRL D + E L +
Sbjct: 212 LLHFSKHFPQFSQILLIGGRNPSEDVEKFKEQGGNIIVATPGRLEDMFRRKAEGLDLASC 271
Query: 543 ---VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ 599
++ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+ L L+
Sbjct: 272 VKSLDVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLR 328
Query: 600 NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESK 659
NP++I + ++T P L+ +++V + L F+ ++ K
Sbjct: 329 NPVRISVKEKGVAASSTQK--TPSRLENYYMVCKADEKFNQLVHFL-------RNHKQEK 379
Query: 660 MLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDV 719
LVF +T +++ + L + + +N +HG M + +R ++F FR ++SG+L+CTDV
Sbjct: 380 HLVFFSTCACVEFYGKALESFV-KNAKIMCIHGKM-KHKRNKIFMEFRHLQSGILVCTDV 437
Query: 720 AARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRR 779
ARG+D+P V+W++QY PS+++ +VHR GRTAR+GHEGS+L+FL+P E + L
Sbjct: 438 MARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHEGSALVFLLPMEESYINFLS--- 494
Query: 780 IRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKG 839
I +E+K + +LL +S L + + K
Sbjct: 495 INQKEMKPQKNTVDLLP------------------------KLKSIALGDRAVFEKGMKA 530
Query: 840 YTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
+ S ++ YA + +L IF K + A+ FAL P + GK
Sbjct: 531 FVSCIQAYAKHECNL--IFRLKDLDFASLARGFALLRMPKMPELRGK 575
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 137/316 (43%), Gaps = 70/316 (22%)
Query: 17 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 76
++ DV + TGSGKTLA+ IPI+Q L K+ +K + A+II PTRELA+Q E+
Sbjct: 153 FMNNKDVAAEAVTGSGKTLAFVIPILQILLRREEKL-KKTQVGAIIITPTRELAIQIDEV 211
Query: 77 FTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRLLDHCKHTETLKFSKVE 135
K F L GG + + + +G +I+VATPGRL D + K E
Sbjct: 212 LLHFSKHFPQFSQILLIGGRNPSEDVEKFKEQGGNIIVATPGRLEDMFRR-------KAE 264
Query: 136 HLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFSKV 195
L L A+C +
Sbjct: 265 GLDL----------------------------------------ASC---------VKSL 275
Query: 196 EHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQ 255
+ LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T V+ L L+NP++
Sbjct: 276 DVLVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVR 332
Query: 256 IDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVF 315
I + ++T P L+ +++V + L F+ ++ K LVF
Sbjct: 333 ISVKEKGVAASSTQK--TPSRLENYYMVCKADEKFNQLVHFL-------RNHKQEKHLVF 383
Query: 316 MATQDMADYHTELLST 331
+T +++ + L +
Sbjct: 384 FSTCACVEFYGKALES 399
>gi|82706116|ref|XP_727247.1| ATP-dependent RNA helicase Has1 [Plasmodium yoelii yoelii 17XNL]
gi|23483000|gb|EAA18812.1| probable ATP-dependent RNA helicase has1 [Plasmodium yoelii yoelii]
Length = 649
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 224/406 (55%), Gaps = 30/406 (7%)
Query: 373 NVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDV 432
N K E ++ +E+ I +KK L E +N +T +Q I L+G D+
Sbjct: 210 NCAISNKKSEKENFYSEQKFEDLD-ICDALKKGLKE-LNFITLTEIQSKCIPHFLNGKDI 267
Query: 433 LVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKS 492
L ++TGSGKTLA+ +P I L + K K+G +II PTREL LQ ++ T LCK
Sbjct: 268 LGAAKTGSGKTLAFLVPSIHILYNI--KFLPKNGTGVLIISPTRELCLQIYQVCTDLCK- 324
Query: 493 FTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEAD 552
+ + GG EK + GI+IL+ATPGRLLDH ++T+ + + L++DEAD
Sbjct: 325 YIPQTNGIIIGGVSRNEEKKKFIHGINILIATPGRLLDHMQNTKEFNYKNLVCLIIDEAD 384
Query: 553 RILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDI 612
R+L G+E +I ++ L K++ Q+ L SAT T V+ L ++LQ PI I+
Sbjct: 385 RLLQIGFEEEINLIVKRLPKKR---QTALFSATQTTKVESLIRLSLQKPIFIEV------ 435
Query: 613 HNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADY 672
T + + L+Q + + R + L +F+ + K++VF +
Sbjct: 436 ---TTKIATVERLQQGYALVDEDKRFLLLFTFL-------KRNTSKKIMVFFNNCMSVQF 485
Query: 673 HTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWI 732
+ +LL+ + +I F +HG Q++R + F F + K+ +L+CT+VAARGLD+P V++I
Sbjct: 486 YNDLLNYI---DIPTFCIHGKKKQNQRLKSFNEFSAAKNAILLCTNVAARGLDIPNVNYI 542
Query: 733 VQYTAPSSSTDYVHRVGRTARVGHE--GSSLLFLIPSEVKLVEELQ 776
+QY P S +Y+HRVGRT R G++ GS+++FL+ E+K + L+
Sbjct: 543 IQYDPPDDSKEYIHRVGRTCR-GNDSAGSAIIFLMKHELKFLNYLK 587
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N +T +Q I L+G D+L ++TGSGKTLA+ +P I L + K K+G
Sbjct: 245 LNFITLTEIQSKCIPHFLNGKDILGAAKTGSGKTLAFLVPSIHILYNI--KFLPKNGTGV 302
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL LQ ++ T LCK + + GG EK + GI+IL+ATPGRLL
Sbjct: 303 LIISPTRELCLQIYQVCTDLCK-YIPQTNGIIIGGVSRNEEKKKFIHGINILIATPGRLL 361
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + L++DEADR+L G+E +I ++ L K++ Q+ L SAT T
Sbjct: 362 DHMQNTKEFNYKNLVCLIIDEADRLLQIGFEEEINLIVKRLPKKR---QTALFSATQT 416
>gi|312065468|ref|XP_003135805.1| hypothetical protein LOAG_00217 [Loa loa]
Length = 813
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 273/533 (51%), Gaps = 61/533 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
TS+ P + ++ L E N T +Q+ S+Q L G DV+ ++TGSGKTLA+ IP
Sbjct: 70 TSFSRMP-LSGATQRGLKES-NFVNPTDIQRESLQYSLTGADVVGAAKTGSGKTLAFLIP 127
Query: 450 IIQKLQEMRPKISRK-DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
+++ L R + SR DG+ A+II PTRELA QT ++ K+ + + L GG ++
Sbjct: 128 VLECL--WRQRWSRTIDGLGALIISPTRELAFQTFQVLNKIGVRHQF-SAALLIGGTDVE 184
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E RI ++I+V TPGRLL H T +++ LV+DEADRILD G+ R + LE
Sbjct: 185 FESKRI-GSVNIVVCTPGRLLQHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILE 243
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L + Q++L SAT T V+ L + L++P+ I A ++ P+SL+Q
Sbjct: 244 NLPNNR---QTLLFSATQTKNVKDLVRLALKDPLYISAHENA-------PQATPESLQQS 293
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
+ V + ++ L SF+L + K L+F++ A + E L +
Sbjct: 294 YFVCSDEDKINILWSFLLNH-------RKKKTLIFVSCCKQARFLAEAFCH-LRPGFSLM 345
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGV-LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
L G+M+Q +R EVFK F + +GV LI TDVA+RGLD VD ++Q P DY+HR
Sbjct: 346 GLWGTMNQMKRLEVFKKFNNKTAGVALIATDVASRGLDFARVDIVLQLDCPVDVDDYIHR 405
Query: 748 VGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
VGRTAR+ +G +LL L P+ E +++ LQ + I I ++ +S K D+SR
Sbjct: 406 VGRTARMDSKGEALLVLTPAQEQAMLKRLQEKNILINKLS--------VSEKQIMDISR- 456
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHL 865
+S + Q + A + + +++R Y +KD +F+ I L
Sbjct: 457 --------------RLQSVIAQYPGMKEFAQRSFVAYIRAIYLMRNKD---VFSLDAIDL 499
Query: 866 GHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML 918
AKS+ L P V + + + NK ++ + KQ+G S ++++
Sbjct: 500 TALAKSYGLAATPRV-------RFLKRIANKHQNLHTNTNQKQKGEKSAEELV 545
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK-DGIYA 60
N T +Q+ S+Q L G DV+ ++TGSGKTLA+ IP+++ L R + SR DG+ A
Sbjct: 89 NFVNPTDIQRESLQYSLTGADVVGAAKTGSGKTLAFLIPVLECL--WRQRWSRTIDGLGA 146
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA QT ++ K+ + + L GG ++ E RI ++I+V TPGRLL
Sbjct: 147 LIISPTRELAFQTFQVLNKIGVRHQF-SAALLIGGTDVEFESKRI-GSVNIVVCTPGRLL 204
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T +++ LV+DEADRILD G+ R + LE L + Q++L SAT T
Sbjct: 205 QHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILENLPNNR---QTLLFSATQT 259
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP E FS +++ LV+DEADRILD G+ R + LE L + Q++L S
Sbjct: 199 TPGRLLQHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILENLPNNR---QTLLFS 255
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V+ L + L++P+ I A ++ P+SL+Q + V + ++ L S
Sbjct: 256 ATQTKNVKDLVRLALKDPLYISAHENA-------PQATPESLQQSYFVCSDEDKINILWS 308
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTE 327
F+L + K L+F++ A + E
Sbjct: 309 FLLNH-------RKKKTLIFVSCCKQARFLAE 333
>gi|403333562|gb|EJY65888.1| hypothetical protein OXYTRI_13953 [Oxytricha trifallax]
Length = 536
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/541 (29%), Positives = 274/541 (50%), Gaps = 92/541 (17%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
++ + P + + +++ M +VT VQ+ I L DV V++ TGSGKTLA+ IP+
Sbjct: 10 TWSDLPQLDKTLCEHIKTEMKFDKVTKVQKAVIPLFLSNKDVCVKACTGSGKTLAFTIPL 69
Query: 451 IQKL---QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVP----SWLTG 503
IQ L Q+ + K + + +I P RELA Q + K F ++P ++LTG
Sbjct: 70 IQHLMTLQKTKQKFENNE-VVGLIFAPARELAFQIHNV----VKQFEHLIPDFSINFLTG 124
Query: 504 GEKMKSEKARIR-KGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
G K++ + RI+ KG ++++ T GR+ D + + F K+E L++DEADR+L+ G E
Sbjct: 125 GTKLEYDVQRIKEKGCNVVIGTIGRIFD-LYSKDLISFKKIEVLIMDEADRLLETGNENM 183
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQID----------------A 606
+ + L L KQ+ ++ L SAT+T ++ L + ++NP +D +
Sbjct: 184 LQQLLGALPKQR---RTGLFSATMTSQLKSLIRIGMRNPYFVDVRVEMSGIFSTEKDKVS 240
Query: 607 ADSTDIHNTTDSLV----------IPDSLKQHFIVT---PPKLRLVALASFILGKCQNVN 653
D+H D LV +P +L+ + + K+R +LG +N+
Sbjct: 241 IQQFDLHG--DKLVLNKQIQDINEVPQNLENFYTLIDHQADKMR------HLLGFLKNL- 291
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV---- 709
+ ++++F T D+H +L ++ NI +KLHG + Q +R+++++ FR+
Sbjct: 292 --KPVRIIIFFGTCASVDFHNLILRFLINANI--YKLHGKIDQKKRSKIYQAFRTQDHEE 347
Query: 710 --KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
+L+ TD+AARG+D+P VDWI+QY P S YVHR+GRTAR G G SL+FL
Sbjct: 348 MESHQLLLTTDLAARGIDIPEVDWIIQYDPPQDSDQYVHRIGRTARAGKSGQSLIFLQKH 407
Query: 768 EVKLVEELQNRRIRIE--EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
E VE L + ++I+ +I K+ + + +++G++
Sbjct: 408 EEPYVEFLMKKGVKIDLLQINTKEEINEEIKAQVQGEMK--------------------- 446
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
Q + + A + S+VR+Y +S L++IF Q+ +G A SF L P V +G
Sbjct: 447 --QDRDIIDKASSAFVSFVRYYKEHS--LQYIFVMNQLDIGEVANSFYLFKVPRVKEILG 502
Query: 886 K 886
K
Sbjct: 503 K 503
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 17/186 (9%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQK---LQEMRPKISRKDG 57
M +VT VQ+ I L DV V++ TGSGKTLA+ IP+IQ LQ+ + K +
Sbjct: 29 MKFDKVTKVQKAVIPLFLSNKDVCVKACTGSGKTLAFTIPLIQHLMTLQKTKQKFENNE- 87
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVP----SWLTGGEKMKSEKARIR-KGISIL 112
+ +I P RELA Q + K F ++P ++LTGG K++ + RI+ KG +++
Sbjct: 88 VVGLIFAPARELAFQIHNV----VKQFEHLIPDFSINFLTGGTKLEYDVQRIKEKGCNVV 143
Query: 113 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL 172
+ T GR+ D + + F K+E L++DEADR+L+ G E + + L L KQ+ ++ L
Sbjct: 144 IGTIGRIFD-LYSKDLISFKKIEVLIMDEADRLLETGNENMLQQLLGALPKQR---RTGL 199
Query: 173 LSATLT 178
SAT+T
Sbjct: 200 FSATMT 205
>gi|393909586|gb|EFO28260.2| hypothetical protein LOAG_00217 [Loa loa]
Length = 807
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 273/533 (51%), Gaps = 61/533 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
TS+ P + ++ L E N T +Q+ S+Q L G DV+ ++TGSGKTLA+ IP
Sbjct: 49 TSFSRMP-LSGATQRGLKES-NFVNPTDIQRESLQYSLTGADVVGAAKTGSGKTLAFLIP 106
Query: 450 IIQKLQEMRPKISRK-DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
+++ L R + SR DG+ A+II PTRELA QT ++ K+ + + L GG ++
Sbjct: 107 VLECL--WRQRWSRTIDGLGALIISPTRELAFQTFQVLNKIGVRHQF-SAALLIGGTDVE 163
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E RI ++I+V TPGRLL H T +++ LV+DEADRILD G+ R + LE
Sbjct: 164 FESKRI-GSVNIVVCTPGRLLQHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILE 222
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L + Q++L SAT T V+ L + L++P+ I A ++ P+SL+Q
Sbjct: 223 NLPNNR---QTLLFSATQTKNVKDLVRLALKDPLYISAHENA-------PQATPESLQQS 272
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
+ V + ++ L SF+L + K L+F++ A + E L +
Sbjct: 273 YFVCSDEDKINILWSFLLNH-------RKKKTLIFVSCCKQARFLAEAFCH-LRPGFSLM 324
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGV-LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
L G+M+Q +R EVFK F + +GV LI TDVA+RGLD VD ++Q P DY+HR
Sbjct: 325 GLWGTMNQMKRLEVFKKFNNKTAGVALIATDVASRGLDFARVDIVLQLDCPVDVDDYIHR 384
Query: 748 VGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
VGRTAR+ +G +LL L P+ E +++ LQ + I I ++ +S K D+SR
Sbjct: 385 VGRTARMDSKGEALLVLTPAQEQAMLKRLQEKNILINKLS--------VSEKQIMDISR- 435
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHL 865
+S + Q + A + + +++R Y +KD +F+ I L
Sbjct: 436 --------------RLQSVIAQYPGMKEFAQRSFVAYIRAIYLMRNKD---VFSLDAIDL 478
Query: 866 GHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML 918
AKS+ L P V + + + NK ++ + KQ+G S ++++
Sbjct: 479 TALAKSYGLAATPRV-------RFLKRIANKHQNLHTNTNQKQKGEKSAEELV 524
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 8/178 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK-DGIYA 60
N T +Q+ S+Q L G DV+ ++TGSGKTLA+ IP+++ L R + SR DG+ A
Sbjct: 68 NFVNPTDIQRESLQYSLTGADVVGAAKTGSGKTLAFLIPVLECL--WRQRWSRTIDGLGA 125
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELA QT ++ K+ + + L GG ++ E RI ++I+V TPGRLL
Sbjct: 126 LIISPTRELAFQTFQVLNKIGVRHQF-SAALLIGGTDVEFESKRI-GSVNIVVCTPGRLL 183
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T +++ LV+DEADRILD G+ R + LE L + Q++L SAT T
Sbjct: 184 QHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILENLPNNR---QTLLFSATQT 238
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP E FS +++ LV+DEADRILD G+ R + LE L + Q++L S
Sbjct: 178 TPGRLLQHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILENLPNNR---QTLLFS 234
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V+ L + L++P+ I A ++ P+SL+Q + V + ++ L S
Sbjct: 235 ATQTKNVKDLVRLALKDPLYISAHENA-------PQATPESLQQSYFVCSDEDKINILWS 287
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTE 327
F+L + K L+F++ A + E
Sbjct: 288 FLLNH-------RKKKTLIFVSCCKQARFLAE 312
>gi|327273954|ref|XP_003221744.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Anolis
carolinensis]
Length = 851
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 251/485 (51%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L
Sbjct: 74 PLSKKTL-KGLQEAQYRMVTEIQRQTIGLALLGKDVLGAAKTGSGKTLAFIVPALEIL-- 130
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+ +K E RI
Sbjct: 131 YRQQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSA-GLVIGGKDLKQEADRIH- 188
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
I+IL+ TPGRLL H T S ++ L+LDEADRILD G+ + +E L K++
Sbjct: 189 NINILICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR-- 246
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q++IV
Sbjct: 247 -QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLEQNYIVCELHQ 298
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ K +VF A+ Y + L + LHG Q
Sbjct: 299 KISMLYSFLRSHLNK-------KSIVFFASCKEVQYLFRVFCR-LRPGLPILALHGKQQQ 350
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F KS VL TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 351 MKRMEVYTDFVRKKSAVLFATDLAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKE 410
Query: 757 EGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL LI SE ++++L +++ I +IK+ + +L D
Sbjct: 411 GGEALLVLIKSEENGMIQQLSQKKVPINKIKI--------------NPEKLVD------- 449
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q +S + Q + L A + + S++R + Y + +F+ ++ + +A S L
Sbjct: 450 --IQKKLQSFLAQDQELKERAQRCFVSYLR--SVYLMKNKEVFDVFKLPIAEYALSLGLA 505
Query: 876 DAPSV 880
AP V
Sbjct: 506 VAPRV 510
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P ++ L R + + DG+ +II P
Sbjct: 91 VTEIQRQTIGLALLGKDVLGAAKTGSGKTLAFIVPALEIL--YRQQWTSTDGLGVLIISP 148
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+IL+ TPGRLL H
Sbjct: 149 TRELAYQTFEVLRKVGKNHDFSA-GLVIGGKDLKQEADRIH-NINILICTPGRLLQHMDE 206
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
T S ++ L+LDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 207 TSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKS 258
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ L+LDEADRILD G+ + +E L K++ Q++L S
Sbjct: 196 TPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 252
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++IV ++ L S
Sbjct: 253 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KFSTPATLEQNYIVCELHQKISMLYS 305
Query: 296 FI 297
F+
Sbjct: 306 FL 307
>gi|341877481|gb|EGT33416.1| hypothetical protein CAEBREN_05738 [Caenorhabditis brenneri]
Length = 754
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 247/480 (51%), Gaps = 50/480 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ +I L G DV+ ++TGSGKTLA IP+++ L R K S + G+ A++I PT
Sbjct: 99 TEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEAL--WRAKWSPEYGLGALVISPT 156
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELALQT + K + + GG ++ E+ RI GI+I+V TPGRLL H
Sbjct: 157 RELALQTFSTINAVGKHHGFSC-GLVIGGSEVAFERNRI-SGINIIVCTPGRLLQHMDEN 214
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
E + ++ LVLDEADR+LD G+ + + + L + Q++L SAT T V+ L
Sbjct: 215 EQMNCDSLQVLVLDEADRMLDMGFAKQLNSIINNLPATR---QTLLFSATQTRNVKDLCR 271
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
+ +P+ + +H + PD+LKQ ++V + ++ AL SFI
Sbjct: 272 VCTNDPVFVS------VHENA-AAATPDNLKQSYVVVEEENKINALWSFIEAH------- 317
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
+ K LVF+ + A + TE+ S L + L G+M+Q +R E F F K+ VLI
Sbjct: 318 KRKKSLVFVNSCKQARFLTEVFSQ-LRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLI 376
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEE 774
TDVA+RGLD +DW++Q P+ DY+HRVGR+AR+ G+SLL + PS E ++ +
Sbjct: 377 ATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSLLMVTPSQEDAMIAK 436
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ I IEE+K+ A T +++ + + + + L
Sbjct: 437 LERHSIPIEELKIH-----------------------PDAMTDIRLKLRAILAESQELKE 473
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK 894
A K +++R + Y+ + IF+ + A SF L P I +GK KN E K
Sbjct: 474 YAQKSIVAYLR--SIYTMKDKKIFDVNSVDAAALADSFGLVSVPR-IRFLGK-KNSESKK 529
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ +I L G DV+ ++TGSGKTLA IP+++ L R K S + G+ A++I PT
Sbjct: 99 TEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEAL--WRAKWSPEYGLGALVISPT 156
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELALQT + K + + GG ++ E+ RI GI+I+V TPGRLL H
Sbjct: 157 RELALQTFSTINAVGKHHGFSC-GLVIGGSEVAFERNRI-SGINIIVCTPGRLLQHMDEN 214
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E + ++ LVLDEADR+LD G+ + + + L + Q++L SAT T
Sbjct: 215 EQMNCDSLQVLVLDEADRMLDMGFAKQLNSIINNLPATR---QTLLFSATQT 263
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 17/145 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
E + ++ LVLDEADR+LD G+ + + + L + Q++L SAT T V+ L
Sbjct: 213 ENEQMNCDSLQVLVLDEADRMLDMGFAKQLNSIINNLPATR---QTLLFSATQTRNVKDL 269
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
+ +P+ + +H + PD+LKQ ++V + ++ AL SFI
Sbjct: 270 CRVCTNDPVFV------SVHENA-AAATPDNLKQSYVVVEEENKINALWSFIEAH----- 317
Query: 306 EDEESKMLVFMATQDMADYHTELLS 330
+ K LVF+ + A + TE+ S
Sbjct: 318 --KRKKSLVFVNSCKQARFLTEVFS 340
>gi|207343942|gb|EDZ71243.1| YJL033Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 675
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 252/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKQVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 479 YSLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|444319404|ref|XP_004180359.1| hypothetical protein TBLA_0D03400 [Tetrapisispora blattae CBS 6284]
gi|387513401|emb|CCH60840.1| hypothetical protein TBLA_0D03400 [Tetrapisispora blattae CBS 6284]
Length = 775
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 252/497 (50%), Gaps = 46/497 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ ++T +Q+ SI L G DVL ++TGSGKTLA+ IP+++KL R + DG+ A+
Sbjct: 61 SFVKLTEIQKNSIPISLKGYDVLGAAKTGSGKTLAFLIPVLEKL--YRENWTEFDGLGAL 118
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA+Q E+ K+ S T + GG+ +K E RI + I+IL+ TPGR+L
Sbjct: 119 IISPTRELAIQIYEVLLKIG-SRTSFSAGLVIGGKDVKFESERISR-INILIGTPGRILQ 176
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H L + ++ LVLDEADR LD G+++ + + L + Q++L SAT + ++
Sbjct: 177 HMDQAVGLNLNNLQMLVLDEADRCLDMGFKKTLDAIVNNLPISR---QTLLFSATQSQSL 233
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++L + I D N T + P++L+Q +I P + +L L SFI +
Sbjct: 234 DDLARLSLTDYKSIGTLDIVK-ENETGASATPETLQQSYIDVPLQDKLDTLFSFIKTHLK 292
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
N KM++F+++ + E L I+ LHG Q RTE F +
Sbjct: 293 N-------KMIIFLSSSKQVHFVYETFRK-LQPGISLMHLHGRQKQKARTETLDKFSRAQ 344
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EV 769
L TDV ARG+D P VDW+VQ P Y+HRVGR AR G +G SL+ L P+ E
Sbjct: 345 QVCLFATDVVARGIDFPSVDWVVQVDCPEDVDTYIHRVGRCARYGKQGKSLIMLTPTEEA 404
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
++ L +++I +++ +K ++ +++ +S + Q
Sbjct: 405 GFLKRLASKKIEPKKLVIK-----------------------QSKKRSIKPQLQSILFQD 441
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV----ISGIG 885
L K + S+V+ + Y + + +F F ++ + +A S L AP + + I
Sbjct: 442 PELKYLGQKAFISYVK--SIYIQKDKEVFKFDELPVEEYANSLGLPGAPKIKIKGMKSIE 499
Query: 886 KPKNKEELKNKKMAINK 902
+ K K+ MA++K
Sbjct: 500 RAKQKKNASRSLMALSK 516
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ ++T +Q+ SI L G DVL ++TGSGKTLA+ IP+++KL R + DG+ A+
Sbjct: 61 SFVKLTEIQKNSIPISLKGYDVLGAAKTGSGKTLAFLIPVLEKL--YRENWTEFDGLGAL 118
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q E+ K+ S T + GG+ +K E RI + I+IL+ TPGR+L
Sbjct: 119 IISPTRELAIQIYEVLLKIG-SRTSFSAGLVIGGKDVKFESERISR-INILIGTPGRILQ 176
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H L + ++ LVLDEADR LD G+++ + + L + Q++L SAT
Sbjct: 177 HMDQAVGLNLNNLQMLVLDEADRCLDMGFKKTLDAIVNNLPISR---QTLLFSAT 228
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L + ++ LVLDEADR LD G+++ + + L + Q++L SAT + ++ LA ++
Sbjct: 184 LNLNNLQMLVLDEADRCLDMGFKKTLDAIVNNLPISR---QTLLFSATQSQSLDDLARLS 240
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + I D N T + P++L+Q +I P + +L L SFI +N
Sbjct: 241 LTDYKSIGTLDIVK-ENETGASATPETLQQSYIDVPLQDKLDTLFSFIKTHLKN------ 293
Query: 310 SKMLVFMAT 318
KM++F+++
Sbjct: 294 -KMIIFLSS 301
>gi|348535433|ref|XP_003455205.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Oreochromis
niloticus]
Length = 590
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 272/537 (50%), Gaps = 67/537 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+ T +T VQ I + DV + TGSGKTLA+ IPII+ L + K+ +K + A
Sbjct: 27 LKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKL-KKMQVGA 85
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 528
++I PTRELA+Q E+ + + F L GG + + + KG +I++ATPGRL
Sbjct: 86 LVITPTRELAVQISEVMEQFIEKFPQFKQILLIGGSNPAEDVEKFKDKGANIVIATPGRL 145
Query: 529 LDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
D + ++ L + ++ LVLDEADR+LD G+E + L L KQ+ ++ L S
Sbjct: 146 EDMFRRKSDGLDLASSVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQR---RTGLFS 202
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T +++L L+NP++I + + + P L ++ + + + L +
Sbjct: 203 ATQTQELEKLVRAGLRNPVRITVKEKG-LAAAATAQKTPSRLSNYYTICRAEDKFNNLVA 261
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ + + K+LVF +T +Y+ +L +L + + +HG M + +R +F
Sbjct: 262 FL-------RQHKHEKLLVFFSTCACVEYYGRVLE-MLVKKVTIHCIHGKM-KHKRNSIF 312
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
FR +KSG+L+CTDV ARG+D+P V+W++QY PSS++ +VHR GRTAR+G+ G +L+F
Sbjct: 313 ADFRKLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRTARIGNYGDALVF 372
Query: 764 LIPSEVKLVEELQ-NRRIRIEEIK-LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L+P E V L N++ ++++ +KD + L VK
Sbjct: 373 LLPMEETYVNFLSINQKCPLQKMSPIKDVVDVLPKVK----------------------- 409
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL------- 874
+ L+ + + K + S+V+ YA + L IF K + G A+ FAL
Sbjct: 410 --AMALEDRAMFERGKKAFVSYVQAYAKHECSL--IFRTKDLDFGCLARGFALLRLPRMP 465
Query: 875 ----RDAPSVISGI-------GKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSE 920
+ P I K KN+E+ + K +A K+K+ + NF K + S+
Sbjct: 466 ELKDKTFPDFIETTVDTDTIRYKDKNREKQRQKALAELKDKTPFPKKNFVKNKAWSK 522
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ I + DV + TGSGKTLA+ IPII+ L + K+ +K + A
Sbjct: 27 LKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
++I PTRELA+Q E+ + + F L GG + + + KG +I++ATPGRL
Sbjct: 86 LVITPTRELAVQISEVMEQFIEKFPQFKQILLIGGSNPAEDVEKFKDKGANIVIATPGRL 145
Query: 120 LDHCKH-TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
D + ++ L + ++ LVLDEADR+LD G+E + L L KQ+ ++ L S
Sbjct: 146 EDMFRRKSDGLDLASSVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQR---RTGLFS 202
Query: 175 ATLT 178
AT T
Sbjct: 203 ATQT 206
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 47/302 (15%)
Query: 56 DGIYAVIILPTRELALQTLE--IFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 113
DG + + + E LQTL+ FT + + +P +++ + K ++ ++
Sbjct: 6 DGTWDRLPVKLNEKILQTLDELKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVI 65
Query: 114 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 173
LL K E LK +V LV+ + Q I+E +E ++ PQF+ ILL
Sbjct: 66 PIIELLL---KREEKLKKMQVGALVITPTRELAVQ-----ISEVMEQFIEKFPQFKQILL 117
Query: 174 SATLTPA----------------------TCWCKHTETLKFSK----VEHLVLDEADRIL 207
PA + + ++ L + ++ LVLDEADR+L
Sbjct: 118 IGGSNPAEDVEKFKDKGANIVIATPGRLEDMFRRKSDGLDLASSVKSLDVLVLDEADRLL 177
Query: 208 DQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT 267
D G+E + L L KQ+ ++ L SAT T +++L L+NP++I + +
Sbjct: 178 DMGFEASLNTILGYLPKQR---RTGLFSATQTQELEKLVRAGLRNPVRITVKEKG-LAAA 233
Query: 268 TDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 327
+ P L ++ + + + L +F+ + + K+LVF +T +Y+
Sbjct: 234 ATAQKTPSRLSNYYTICRAEDKFNNLVAFL-------RQHKHEKLLVFFSTCACVEYYGR 286
Query: 328 LL 329
+L
Sbjct: 287 VL 288
>gi|358396546|gb|EHK45927.1| hypothetical protein TRIATDRAFT_40957 [Trichoderma atroviride IMI
206040]
Length = 812
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 214/374 (57%), Gaps = 23/374 (6%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ T +T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+
Sbjct: 71 HFTNMTEIQEQAIPLGLKGKDILGAAKTGSGKTLAFLVPVLEKL--YRAQWTEFDGLGAL 128
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I+ PTRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L
Sbjct: 129 ILSPTRELAVQIFEVLRKIGRHHAFSA-GLVIGGKSLKEEAERLIR-MNILVCTPGRMLQ 186
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT + V
Sbjct: 187 HLDQTAGFDANNLQILVLDEADRIMDLGFQSAVDALVEHLPKSR---QTLMFSATQSKKV 243
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++L++P D +H + P +L+QH+IVTP ++ L FI +
Sbjct: 244 SDLARLSLKDP------DYVSVHQDA-TAATPATLQQHYIVTPLPEKIDTLYGFIKANVK 296
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF+++ + E L L I LHG Q R E+ F + K
Sbjct: 297 -------SKIIVFLSSGKQVRFVYESLRH-LQPGIPLLHLHGRQKQIARLEITNRFTAAK 348
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+ L TDV ARG+D P VDW++Q P + Y+HRVGRTAR G ++LFL PSE +
Sbjct: 349 TSCLFATDVVARGIDFPAVDWVIQADCPEDTDTYIHRVGRTARYESNGRAVLFLDPSEEE 408
Query: 771 -LVEELQNRRIRIE 783
++++L+ R+I I+
Sbjct: 409 GMIKKLEQRKIPIQ 422
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+
Sbjct: 71 HFTNMTEIQEQAIPLGLKGKDILGAAKTGSGKTLAFLVPVLEKL--YRAQWTEFDGLGAL 128
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L
Sbjct: 129 ILSPTRELAVQIFEVLRKIGRHHAFSA-GLVIGGKSLKEEAERLIR-MNILVCTPGRMLQ 186
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT
Sbjct: 187 HLDQTAGFDANNLQILVLDEADRIMDLGFQSAVDALVEHLPKSR---QTLMFSAT 238
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + +E L K + Q+++ S
Sbjct: 180 TPGRMLQHLDQTAGFDANNLQILVLDEADRIMDLGFQSAVDALVEHLPKSR---QTLMFS 236
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L++P D +H + P +L+QH+IVTP ++ L
Sbjct: 237 ATQSKKVSDLARLSLKDP------DYVSVHQDA-TAATPATLQQHYIVTPLPEKIDTLYG 289
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 290 FIKANVK-------SKIIVFLSS 305
>gi|328870453|gb|EGG18827.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 897
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 259/497 (52%), Gaps = 51/497 (10%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
A + + + P I K L+E I +T +Q+ SI L G D+L ++TGSGKTLA+
Sbjct: 128 AASKFNQLP-ISKLTMKGLDEKKYI-DMTDIQRSSIPHSLCGRDILGAAKTGSGKTLAFI 185
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
+P+++ L R + +DG+ A+I+ PTRELA+Q ++ K ++ + GG+ +
Sbjct: 186 VPMLELL--YRNSWNIEDGVGAIILSPTRELAIQIFDVLRDAGKYHSFSA-GLIIGGKNV 242
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
+EK +I + ++IL+ATPGRLL H TE + + ++ L+LDEADRILD G+ + + +
Sbjct: 243 DNEKKKINE-MNILIATPGRLLQHMDETEGFRCNNLQMLILDEADRILDFGFTKTLNSIV 301
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
+ L + Q++L SAT T +V+ LA ++L+ P + D D + P +L Q
Sbjct: 302 QNLPSSR---QTLLFSATQTKSVKDLARLSLREPEYVSVYDR-------DLMSTPANLTQ 351
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
+ + + ++ L SF+ K +VF+ T + E ++
Sbjct: 352 TVMFSTLEDKINLLYSFLHSHLT-------KKTIVFLTTCKQVRFIYETF-YLINPGCRL 403
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
F+LHG M Q+ R +VF+ F K G L TDVAARGLD P VDW++Q P Y+HR
Sbjct: 404 FQLHGKMKQTSRLDVFQQFCDEKMGTLFATDVAARGLDFPTVDWVIQMDCPDDIATYIHR 463
Query: 748 VGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
VGRTAR EG+SL L+P+E ++ ++ + I +L E +
Sbjct: 464 VGRTARNNTEGNSLTVLLPTEKPFIKLMEKQNIH----------HQILETNPEKSI---- 509
Query: 808 DGNVETAATALQMSFESAVLQQKI-LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
N++ +A+L +K+ L A K + ++V+ + Y +D + +F+ + + L
Sbjct: 510 --NIQPKL--------AAILSEKVDLKYLAQKAFITYVK--SIYRQDNKEVFSLEGLDLK 557
Query: 867 HFAKSFALRDAPSVISG 883
F+ S L AP++ G
Sbjct: 558 AFSNSMGLPGAPNIQIG 574
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ SI L G D+L ++TGSGKTLA+ +P+++ L R + +DG+ A+I+ P
Sbjct: 153 MTDIQRSSIPHSLCGRDILGAAKTGSGKTLAFIVPMLELL--YRNSWNIEDGVGAIILSP 210
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K ++ + GG+ + +EK +I + ++IL+ATPGRLL H
Sbjct: 211 TRELAIQIFDVLRDAGKYHSFSA-GLIIGGKNVDNEKKKINE-MNILIATPGRLLQHMDE 268
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
TE + + ++ L+LDEADRILD G+ + + ++ L + Q++L SAT T +
Sbjct: 269 TEGFRCNNLQMLILDEADRILDFGFTKTLNSIVQNLPSSR---QTLLFSATQTKS 320
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
TE + + ++ L+LDEADRILD G+ + + ++ L + Q++L SAT T +V+ LA
Sbjct: 269 TEGFRCNNLQMLILDEADRILDFGFTKTLNSIVQNLPSSR---QTLLFSATQTKSVKDLA 325
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
++L+ P + D D + P +L Q + + + ++ L SF+
Sbjct: 326 RLSLREPEYVSVYDR-------DLMSTPANLTQTVMFSTLEDKINLLYSFL 369
>gi|300122522|emb|CBK23092.2| ATP-dependent RNA helicase DBP4 [Blastocystis hominis]
Length = 687
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 203/377 (53%), Gaps = 24/377 (6%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+E P + + KK LNE T++T +QQ S+ L G D+L ++TGSGKTLA+ IP +
Sbjct: 64 FEALP-LSNYTKKGLNE-AGFTEMTDIQQKSLISALMGRDILGCAKTGSGKTLAFLIPAL 121
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L R + + +DGI VII PTRELA+Q ++ + K ++ + GG+ + E+
Sbjct: 122 ECL--YRERWTEEDGIGIVIISPTRELAMQIFDVLCTIGKYHSFSA-GLVIGGKDFEEEQ 178
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+RI ++ILVATPGR L H + T S V LVLDE DR LD G++ I ++ L
Sbjct: 179 SRIVS-MNILVATPGRFLQHLEQTPGFDCSNVRGLVLDEVDRCLDMGFKTTIDHIVDSLG 237
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
+ Q+ L SAT+ V+ LA L NP+ I+ N+ D P +L Q +IV
Sbjct: 238 GDR---QTQLFSATIDENVKTLASSILSNPVSINV-------NSDDDYATPTTLTQRYIV 287
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
++ L SFI + K+LVF A++ + E + ++ LH
Sbjct: 288 CDLSRKVELLYSFIKSHLR-------CKILVFAASRKEVRFLFEAFRR-MKPGVSLLHLH 339
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G Q+ RT + F VL CTDVAARG+D P VDW+VQ+ P + Y+HRVGR
Sbjct: 340 GKQKQTMRTYTYYDFIQKDHAVLFCTDVAARGIDFPAVDWVVQFDCPEDAATYIHRVGRA 399
Query: 752 ARVGHEGSSLLFLIPSE 768
R +G+ LLFL+P E
Sbjct: 400 GRFRAKGNGLLFLLPQE 416
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 7/176 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
T++T +QQ S+ L G D+L ++TGSGKTLA+ IP ++ L R + + +DGI V
Sbjct: 81 GFTEMTDIQQKSLISALMGRDILGCAKTGSGKTLAFLIPALECL--YRERWTEEDGIGIV 138
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA+Q ++ + K ++ + GG+ + E++RI ++ILVATPGR L
Sbjct: 139 IISPTRELAMQIFDVLCTIGKYHSFSA-GLVIGGKDFEEEQSRIVS-MNILVATPGRFLQ 196
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
H + T S V LVLDE DR LD G++ I ++ L + Q+ L SAT+
Sbjct: 197 HLEQTPGFDCSNVRGLVLDEVDRCLDMGFKTTIDHIVDSLGGDR---QTQLFSATI 249
>gi|340516612|gb|EGR46860.1| predicted protein [Trichoderma reesei QM6a]
Length = 815
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 213/374 (56%), Gaps = 23/374 (6%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ T +T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+
Sbjct: 71 HFTNMTEIQEQAIPLALKGKDILGAAKTGSGKTLAFLVPVLEKL--YRAQWTEFDGLGAL 128
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I+ PTRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L
Sbjct: 129 ILSPTRELAVQIFEVLRKIGRHHAFSA-GLVIGGKSLKEEAERLIR-MNILVCTPGRMLQ 186
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT + V
Sbjct: 187 HLDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLMFSATQSKKV 243
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++L++P + +H S P +L+QH+IVTP +L L FI +
Sbjct: 244 SDLARLSLKDP------EYVSVHQDA-STATPTTLQQHYIVTPLPEKLDTLYGFIKANVK 296
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF+++ + E L I LHG Q R E+ F + K
Sbjct: 297 -------SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQKQVARLEITNRFTAAK 348
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+ L TDV ARG+D P VDW++Q P + Y+HRVGRTAR G ++LFL PSE +
Sbjct: 349 TSCLFATDVVARGIDFPAVDWVIQVDCPEDADTYIHRVGRTARFQSNGRAVLFLDPSEEE 408
Query: 771 -LVEELQNRRIRIE 783
+++ L++++I I+
Sbjct: 409 GMIKRLEHKKIPIQ 422
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+
Sbjct: 71 HFTNMTEIQEQAIPLALKGKDILGAAKTGSGKTLAFLVPVLEKL--YRAQWTEFDGLGAL 128
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L
Sbjct: 129 ILSPTRELAVQIFEVLRKIGRHHAFSA-GLVIGGKSLKEEAERLIR-MNILVCTPGRMLQ 186
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT
Sbjct: 187 HLDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLMFSAT 238
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRI+D G++ + +E L K + Q+++ SAT + V LA ++L++P
Sbjct: 202 LVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLMFSATQSKKVSDLARLSLKDP---- 254
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +H S P +L+QH+IVTP +L L FI + SK++VF++
Sbjct: 255 --EYVSVHQDA-STATPTTLQQHYIVTPLPEKLDTLYGFIKANVK-------SKIIVFLS 304
Query: 318 T 318
+
Sbjct: 305 S 305
>gi|301118004|ref|XP_002906730.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108079|gb|EEY66131.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 661
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 249/492 (50%), Gaps = 64/492 (13%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE-------MRPK 460
+ + +T VQ ++ L DV V + TGSGKTL++ +PI+Q L+ P+
Sbjct: 19 DALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLSFVLPIVQLLKAKLADGSITAPR 78
Query: 461 ISRKDGIYAVIILPTRELALQTLEIFTKL-CKSFTWIVPSWLTGGEKMKSEKARIRKGI- 518
+ + A++I PTRELA Q E K ++ + + GG + + + IR +
Sbjct: 79 HADLTKLVAMVISPTRELARQIFECAEKFFARALSTVQLLLFVGGTSVDEDLSLIRGAVG 138
Query: 519 --SILVATPGR---LLDHC--KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
S+++ TPGR LL+ C ET +F E L+LDEAD +LD G+E + + LE L
Sbjct: 139 KCSVVIGTPGRTEDLLNRCVGSSVETREF---EILILDEADTLLDMGFEVSLNKILEHLP 195
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T V+ LA L+NP I S + N T + P +L+ ++ +
Sbjct: 196 KQR---RTGLFSATQTQEVKALARAGLRNPATI----SVQVANNTQ--ITPATLQNYYCL 246
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL-GEN-IAFFK 689
RL AL F+ K + K++VF +T D+ + +L + G+N
Sbjct: 247 VGHDQRLSALHHFVQAK-------KGEKLIVFFSTCGSVDFFSRVLEELFKGKNDFPVVA 299
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q +RT + F ++KSG+L+CTDV ARG+DLP VDWIVQY P +VHRVG
Sbjct: 300 LHGKMPQKKRTTNYDHFSALKSGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVG 359
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLK-DCLQNLLSVKMEGDLSRLAD 808
RTAR G G +L FL +E V L+ R++ EE+ L D ++++L
Sbjct: 360 RTARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEMTLPLDTMEDVLP------------ 407
Query: 809 GNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHF 868
+S +L+ + L K + ++VR Y + + IF FK++ LG
Sbjct: 408 ------------KVKSFILEDRDLLEKGTKAFMAFVRSYKEHQ--CQFIFRFKELDLGAA 453
Query: 869 AKSFALRDAPSV 880
A+ F L P +
Sbjct: 454 ARGFCLLQLPKI 465
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 22/194 (11%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE-------MRPKIS 53
+ +T VQ ++ L DV V + TGSGKTL++ +PI+Q L+ P+ +
Sbjct: 21 LGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLSFVLPIVQLLKAKLADGSITAPRHA 80
Query: 54 RKDGIYAVIILPTRELALQTLEIFTK-LCKSFTWIVPSWLTGGEKMKSEKARIRKGI--- 109
+ A++I PTRELA Q E K ++ + + GG + + + IR +
Sbjct: 81 DLTKLVAMVISPTRELARQIFECAEKFFARALSTVQLLLFVGGTSVDEDLSLIRGAVGKC 140
Query: 110 SILVATPGR---LLDHC--KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 164
S+++ TPGR LL+ C ET +F E L+LDEAD +LD G+E + + LE L KQ
Sbjct: 141 SVVIGTPGRTEDLLNRCVGSSVETREF---EILILDEADTLLDMGFEVSLNKILEHLPKQ 197
Query: 165 KPQFQSILLSATLT 178
+ ++ L SAT T
Sbjct: 198 R---RTGLFSATQT 208
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 19/148 (12%)
Query: 182 CWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPA 241
C ET +F E L+LDEAD +LD G+E + + LE L KQ+ ++ L SAT T
Sbjct: 157 CVGSSVETREF---EILILDEADTLLDMGFEVSLNKILEHLPKQR---RTGLFSATQTQE 210
Query: 242 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 301
V+ LA L+NP I S + N T + P +L+ ++ + RL AL F+ K
Sbjct: 211 VKALARAGLRNPATI----SVQVANNTQ--ITPATLQNYYCLVGHDQRLSALHHFVQAK- 263
Query: 302 QNVNEDEESKMLVFMATQDMADYHTELL 329
+ K++VF +T D+ + +L
Sbjct: 264 ------KGEKLIVFFSTCGSVDFFSRVL 285
>gi|159113843|ref|XP_001707147.1| ATP-dependent RNA helicase HAS1, putative [Giardia lamblia ATCC
50803]
gi|157435250|gb|EDO79473.1| ATP-dependent RNA helicase HAS1, putative [Giardia lamblia ATCC
50803]
Length = 547
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 259/513 (50%), Gaps = 53/513 (10%)
Query: 382 VSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSG 441
++E F+ TS + PF+ + + + M +T +Q+ SI IL G ++ ++ TGSG
Sbjct: 26 MTETPFSETS------LSPFLLEAV-DAMGHKNMTRIQEASIPVILSGRNMTAKAHTGSG 78
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
K+LA+ +P I + + K+ G+ +++ PTRELALQ + T+L S T I
Sbjct: 79 KSLAFLLPAIDLIHKANMKLHHGTGV--IVLTPTRELALQLYNVATQLI-SATNITVGLA 135
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
GG + E + KG S+++ATPGRL DH +T K K+ L+LDEAD +L+ G+++
Sbjct: 136 IGGTSRQKEANHLCKGASVVIATPGRLCDHLNNTPGFKTDKLFMLILDEADMLLEYGFQQ 195
Query: 562 DIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVI 621
++ L +L K + Q SAT++ + M + I +TD+ ++ +
Sbjct: 196 ELEAILRMLPGPKLR-QVCFFSATMSDKCLEVPHMEVDKETLIRI--NTDVKSSAATRA- 251
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
+Q +I+ PP+ R + L +F+ + K++VF++++D +++ E L +
Sbjct: 252 --HFEQGYIICPPEQRFLLLYTFM-------KRRSDKKIIVFLSSRDSVEFYYEFLRFIG 302
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
+I L G M Q +R E + F + +SGVL+ T+VAARGLDLP +D+++Q+ P S
Sbjct: 303 MASI--LMLDGGMKQKQRMETYNKFCNAQSGVLLATNVAARGLDLPAIDYVIQFDPPESV 360
Query: 742 TDYVHRVGRTAR--VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKM 799
Y+HR GR R G +G LLFL+ E K + L+ + + E +
Sbjct: 361 ESYIHRAGRACRGDTGKKGVGLLFLMSHETKFISFLKAHNVSLFEFEFP----------- 409
Query: 800 EGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFN 859
AD + +Q E+ + L A Y S++ YAS+ L+ +FN
Sbjct: 410 -------ADKIIN-----VQAEMENLIATIYYLRRKAQNAYRSFISAYASHH--LKKVFN 455
Query: 860 FKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKE 891
+I L +SF L + P V + GI KN E
Sbjct: 456 VNKIDLECLGRSFGLTEVPRVDVPGISLYKNME 488
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ SI IL G ++ ++ TGSGK+LA+ +P I + + K+ G+
Sbjct: 47 MGHKNMTRIQEASIPVILSGRNMTAKAHTGSGKSLAFLLPAIDLIHKANMKLHHGTGV-- 104
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + T+L S T I GG + E + KG S+++ATPGRL
Sbjct: 105 IVLTPTRELALQLYNVATQLI-SATNITVGLAIGGTSRQKEANHLCKGASVVIATPGRLC 163
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +T K K+ L+LDEAD +L+ G+++++ L +L K + Q SAT++
Sbjct: 164 DHLNNTPGFKTDKLFMLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSDK 222
Query: 181 TCWCKHTETLK 191
H E K
Sbjct: 223 CLEVPHMEVDK 233
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 184 CKH---TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
C H T K K+ L+LDEAD +L+ G+++++ L +L K + Q SAT++
Sbjct: 163 CDHLNNTPGFKTDKLFMLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSD 221
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ M + I +TD+ ++ + +Q +I+ PP+ R + L +F+
Sbjct: 222 KCLEVPHMEVDKETLIRI--NTDVKSSAATRA---HFEQGYIICPPEQRFLLLYTFM--- 273
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
+ K++VF++++D +++ E L
Sbjct: 274 ----KRRSDKKIIVFLSSRDSVEFYYEFL 298
>gi|7716782|gb|AAF68541.1|AF252758_1 helicase pitchoune [Drosophila simulans]
gi|7716786|gb|AAF68543.1|AF252760_1 helicase pitchoune [Drosophila simulans]
gi|7716788|gb|AAF68544.1|AF252761_1 helicase pitchoune [Drosophila simulans]
gi|7716792|gb|AAF68546.1|AF252763_1 helicase pitchoune [Drosophila simulans]
Length = 375
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 227/413 (54%), Gaps = 48/413 (11%)
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T ++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L
Sbjct: 122 ATQTARIEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLF 174
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ YH EL + + ++ +HG Q++RT
Sbjct: 175 TFL-------KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTT 224
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +L
Sbjct: 225 FFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHAL 284
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L + P E+ + L+ ++ + E E ++AD +Q+
Sbjct: 285 LLMRPEELGFLRYLKAAKVPLNE--------------FEFSWQKIAD---------IQLQ 321
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
E + + L+ SA + + S+VR Y S+ L+ IFN + L AKSF
Sbjct: 322 LEKLIAKNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGF 372
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 14/194 (7%)
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQ 225
AT T A LK + V D D L+QGY E+ + LKK
Sbjct: 122 ATQT-ARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKN 180
Query: 226 KPQFQSVLLSATLT 239
+ + V S+ ++
Sbjct: 181 RKKKVMVFFSSCMS 194
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 81 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 137
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 138 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 183
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 184 KVMVFFSSCMSVKYHHELFN 203
>gi|406698075|gb|EKD01321.1| hypothetical protein A1Q2_04399 [Trichosporon asahii var. asahii
CBS 8904]
Length = 842
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 230/434 (52%), Gaps = 34/434 (7%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLN--EGMNITQVTTVQQLSIQPILDGGDVLV 434
R L+ + AP+ EF + P + L + + T +Q LSI P L G D++
Sbjct: 44 RELQAKIDNYVAPSEITEFKQL-PLSQPTLRGLKKAHFVNPTPIQALSIPPALKGQDIMG 102
Query: 435 RSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFT 494
++TGSGKTLA+ IPI+++L K + DG+ AV+I PTRELA+QT F LC
Sbjct: 103 SARTGSGKTLAFLIPILERL--FIHKWGQMDGLGAVVISPTRELAMQT---FNALCSIGM 157
Query: 495 W--IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEAD 552
+ + GG+ +K E+ R+ + ++IL+ATPGRLL H T + + ++ LVLDEAD
Sbjct: 158 YHNFSAGLVIGGKPLKEERDRLSR-MNILIATPGRLLQHLDSTVGFESAGLKMLVLDEAD 216
Query: 553 RILDQGYERDIAEFLEILKKQKP-----QFQSILLSATLTPAVQRLAGMTLQNPIQIDAA 607
R+LD G+ + I+K P Q++L SAT + + LA ++L +P+ I+
Sbjct: 217 RLLDMGF---LPALRAIVKHFSPGGHNASRQTLLFSATQSKDLATLAKLSLHDPLYINT- 272
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQ 667
+ + V+P +L+Q + V P + +L AL FI + K +VF+ +
Sbjct: 273 -----NKPGEEGVMPSNLEQFYTVVPLERKLDALWGFIKTHLK-------MKGVVFVTSG 320
Query: 668 DMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLP 727
+ E L + LHG Q R E+F F S S +LICTD+AARGLD P
Sbjct: 321 KQVRFIFETFRR-LHPGLPLMHLHGKQKQPTRMEIFAKFSSSNSALLICTDIAARGLDFP 379
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIK 786
VDW+VQ P Y+HRVGRTAR EG L L+PSE + ++ + I +++IK
Sbjct: 380 AVDWVVQLDCPDDVDSYIHRVGRTARYQSEGKGLCILLPSEEEGMLARWAEKGIEVKKIK 439
Query: 787 LKDCLQNLLSVKME 800
+K+ L +M+
Sbjct: 440 IKESKMGNLEQQMQ 453
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 16/177 (9%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q LSI P L G D++ ++TGSGKTLA+ IPI+++L K + DG+ AV+I PT
Sbjct: 84 TPIQALSIPPALKGQDIMGSARTGSGKTLAFLIPILERL--FIHKWGQMDGLGAVVISPT 141
Query: 67 RELALQTLEIFTKLCKSFTW--IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
RELA+QT F LC + + GG+ +K E+ R+ + ++IL+ATPGRLL H
Sbjct: 142 RELAMQT---FNALCSIGMYHNFSAGLVIGGKPLKEERDRLSR-MNILIATPGRLLQHLD 197
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-----QFQSILLSAT 176
T + + ++ LVLDEADR+LD G+ + I+K P Q++L SAT
Sbjct: 198 STVGFESAGLKMLVLDEADRLLDMGF---LPALRAIVKHFSPGGHNASRQTLLFSAT 251
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 88 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH----CKHTETLKFSKVEHLVLDEAD 143
+P L G + M S + K ++ L+ RL H + S L + +
Sbjct: 91 IPPALKGQDIMGSARTGSGKTLAFLIPILERLFIHKWGQMDGLGAVVISPTRELAMQTFN 150
Query: 144 RILDQGYERDIAEFLEI----LKKQKPQFQ--SILLSATLTPATCWCKHTETLKF--SKV 195
+ G + + L I LK+++ + +IL++ TP T+ F + +
Sbjct: 151 ALCSIGMYHNFSAGLVIGGKPLKEERDRLSRMNILIA---TPGRLLQHLDSTVGFESAGL 207
Query: 196 EHLVLDEADRILDQGYERDIAEFLEILKKQKP-----QFQSVLLSATLTPAVQRLAGMTL 250
+ LVLDEADR+LD G+ + I+K P Q++L SAT + + LA ++L
Sbjct: 208 KMLVLDEADRLLDMGF---LPALRAIVKHFSPGGHNASRQTLLFSATQSKDLATLAKLSL 264
Query: 251 QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
+P+ I+ + + V+P +L+Q + V P + +L AL FI
Sbjct: 265 HDPLYINT------NKPGEEGVMPSNLEQFYTVVPLERKLDALWGFI 305
>gi|428178972|gb|EKX47845.1| hypothetical protein GUITHDRAFT_69210 [Guillardia theta CCMP2712]
Length = 645
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 221/405 (54%), Gaps = 29/405 (7%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
A S+ E P P ++ L EG T + +Q+ I IL G D+L ++TGSGKTLA+
Sbjct: 56 AAKSFRELPLSRPTLQ-GLEEGGYKT-MKDIQRACIPHILAGRDLLGAAKTGSGKTLAFL 113
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
IP++++L R K S+ DG+ ++I PTRELA+Q E+ K+ K + + GG+ +
Sbjct: 114 IPVMERL--FRLKWSKLDGLGGLVISPTRELAIQIFEVLRKVGKKHE-MSAGLVIGGKDV 170
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
E+ R+ ++ILV TPGRLL H T ++ LVLDEADRILD G+ I +
Sbjct: 171 GQEQERVTH-MNILVCTPGRLLQHMDETYGFDACNLQVLVLDEADRILDLGFSATINSIV 229
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
E L K + Q++L SATL+ V+ LA ++L+ P I IH + S V P L+Q
Sbjct: 230 ENLPKSR---QTLLFSATLSKQVRDLARLSLKEPEYIA------IHEAS-STVTPSRLQQ 279
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
H++V P +L L SFI +SK +VF+++ + + E+ L +
Sbjct: 280 HYMVVNPAEKLDVLWSFI-------KMHLKSKSIVFLSSCNQVRFVHEVFCR-LRPGVVL 331
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIV-----QYTAPSSST 742
LHG + Q +R ++F F K VL TDVA RGLD P VDW++ Q P
Sbjct: 332 SALHGKIKQEKRLQIFLDFCERKEAVLFATDVAGRGLDFPEVDWVIQAICAQVDCPEDVA 391
Query: 743 DYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
Y+HRVGRTAR +G SLL L E K+ +Q RI I++I++
Sbjct: 392 TYIHRVGRTARNEAKGKSLLLLCEHEKKMASNVQEARIPIKQIQV 436
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 9 VQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRE 68
+Q+ I IL G D+L ++TGSGKTLA+ IP++++L R K S+ DG+ ++I PTRE
Sbjct: 84 IQRACIPHILAGRDLLGAAKTGSGKTLAFLIPVMERL--FRLKWSKLDGLGGLVISPTRE 141
Query: 69 LALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTET 128
LA+Q E+ K+ K + + GG+ + E+ R+ ++ILV TPGRLL H T
Sbjct: 142 LAIQIFEVLRKVGKKHE-MSAGLVIGGKDVGQEQERVTH-MNILVCTPGRLLQHMDETYG 199
Query: 129 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTE 188
++ LVLDEADRILD G+ I +E L K + Q++L SATL+ +
Sbjct: 200 FDACNLQVLVLDEADRILDLGFSATINSIVENLPKSR---QTLLFSATLSKQV---RDLA 253
Query: 189 TLKFSKVEHLVLDEA 203
L + E++ + EA
Sbjct: 254 RLSLKEPEYIAIHEA 268
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F ++ LVLDEADRILD G+ I +E L K + Q++L S
Sbjct: 186 TPGRLLQHMDETYGFDACNLQVLVLDEADRILDLGFSATINSIVENLPKSR---QTLLFS 242
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
ATL+ V+ LA ++L+ P I IH + S V P L+QH++V P +L L S
Sbjct: 243 ATLSKQVRDLARLSLKEPEYI------AIHEAS-STVTPSRLQQHYMVVNPAEKLDVLWS 295
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
FI +SK +VF+++ + + E+
Sbjct: 296 FI-------KMHLKSKSIVFLSSCNQVRFVHEVF 322
>gi|160380619|sp|A6ZPU3.1|DBP4_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP4; AltName: Full=DEAD
box protein 4; AltName: Full=Helicase CA4; AltName:
Full=Helicase UF1
gi|151945052|gb|EDN63303.1| helicase CA [Saccharomyces cerevisiae YJM789]
gi|349579165|dbj|GAA24328.1| K7_Hca4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 770
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 252/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKQVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 479 YSLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|290771182|emb|CAY80746.2| Hca4p [Saccharomyces cerevisiae EC1118]
Length = 770
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 252/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKQVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 479 YSLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|154286470|ref|XP_001544030.1| hypothetical protein HCAG_01076 [Ajellomyces capsulatus NAm1]
gi|150407671|gb|EDN03212.1| hypothetical protein HCAG_01076 [Ajellomyces capsulatus NAm1]
Length = 721
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 219/389 (56%), Gaps = 31/389 (7%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T V LA
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQTKKVSDLA 244
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H T S P L+Q++I+TP +L L SFI +
Sbjct: 245 RLSLRDP------EYVSVHETAAS-ATPAKLQQNYIITPLPEKLDTLWSFIRSSLK---- 293
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF ++ + E + I LHG Q R ++ K F + K L
Sbjct: 294 ---SKIIVFFSSGKQVRFVYESFRH-MRPGIPLLHLHGRQKQGARVDITKKFSAAKYSCL 349
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TD+AARGLD P VDW++Q P + Y+HR GRTAR G ++LFL PS E +++
Sbjct: 350 FATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVLFLEPSEEAGMLK 409
Query: 774 ELQNRRIRIEEIK--------LKDCLQNL 794
L+ ++I IE+I +K+ LQN+
Sbjct: 410 RLEQKKIPIEKINVRSKKQQSIKNQLQNM 438
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G D+L ++TGSGKTLA+ +P+++ L R + + DG+ A+++ P
Sbjct: 72 LTDIQARAIPHALKGRDILGAAKTGSGKTLAFLVPLLELL--YRKQWTEYDGLGALVLSP 129
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + T+ + GG+ ++ E+ R+ K ++ILV TPGR+L H
Sbjct: 130 TRELAIQIFEVLRKIGRHHTFSA-GLVIGGKGLQEEQERLGK-MNILVCTPGRMLQHMDQ 187
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ LVLDEADRI+D G++ + ++ L K++ Q++L SAT T
Sbjct: 188 TAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFSATQT 237
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + ++ L K++ Q++L S
Sbjct: 177 TPGRMLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKER---QTMLFS 233
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T V LA ++L++P + +H T S P L+Q++I+TP +L L S
Sbjct: 234 ATQTKKVSDLARLSLRDP------EYVSVHETAAS-ATPAKLQQNYIITPLPEKLDTLWS 286
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF ++
Sbjct: 287 FIRSSLK-------SKIIVFFSS 302
>gi|51013687|gb|AAT93137.1| YJL033W [Saccharomyces cerevisiae]
Length = 770
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 252/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKQVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 479 YSLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|57525164|ref|NP_001006185.1| ATP-dependent RNA helicase DDX55 [Gallus gallus]
gi|82197869|sp|Q5ZLN8.1|DDX55_CHICK RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|53129029|emb|CAG31355.1| hypothetical protein RCJMB04_5g4 [Gallus gallus]
Length = 591
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 255/486 (52%), Gaps = 48/486 (9%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+ + ++T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K +
Sbjct: 25 QDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKMQV 83
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPG 526
A+II PTRELA+Q E+ T K F L GG + + ++ G +I+VATPG
Sbjct: 84 GAIIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPG 143
Query: 527 RLLD-HCKHTETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL 581
RL D + + L + ++ LVLDEADR+LD G+E + L L KQ+ ++ L
Sbjct: 144 RLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQR---RTGL 200
Query: 582 LSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 641
SAT T V+ L L+NP++I + T++ P L+ ++++ + L
Sbjct: 201 FSATQTQEVENLVRAGLRNPVRISVKEKGVA--ATNTQKTPTRLENYYMICKADEKFNQL 258
Query: 642 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTE 701
F+ + ++ K LVF +T +Y+ + L +++ + + +HG M + +R +
Sbjct: 259 VHFL-------RQHKQEKHLVFFSTCACVEYYGKALESLI-KQVKIMCIHGKM-KHKRNK 309
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
+F FR + G+L+CTDV ARG+D+P V W++QY PSS++ +VHR GRTAR+G+ GS+L
Sbjct: 310 IFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSAL 369
Query: 762 LFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
+FL+P E + L N++ ++E++ + + +LL +++ A A +
Sbjct: 370 VFLLPMEESYINFLSINQKCPMQEMQPQRNVLDLLP-------------KLKSMALADRA 416
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
FE + K + S+++ YA + +L IF K + AK FAL P +
Sbjct: 417 VFEKGM-----------KAFVSYIQAYAKHECNL--IFRIKDLDFASLAKGFALLKMPKM 463
Query: 881 ISGIGK 886
GK
Sbjct: 464 PELRGK 469
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 145/332 (43%), Gaps = 70/332 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ T K F L GG + + ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
E L +AD L
Sbjct: 146 ---------------EDLFRRKAD--------------------------------GLDL 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A+C ++ LVLDEADR+LD G+E + L L KQ+ ++ L SAT T
Sbjct: 159 ASC---------VKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP++I + T++ P L+ ++++ + L F+
Sbjct: 207 QEVENLVRAGLRNPVRISVKEKGVA--ATNTQKTPTRLENYYMICKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLST 331
+ ++ K LVF +T +Y+ + L +
Sbjct: 263 -----RQHKQEKHLVFFSTCACVEYYGKALES 289
>gi|6322427|ref|NP_012501.1| Hca4p [Saccharomyces cerevisiae S288c]
gi|1170186|sp|P20448.2|DBP4_YEAST RecName: Full=ATP-dependent RNA helicase HCA4; AltName: Full=DEAD
box protein 4; AltName: Full=Helicase CA4; AltName:
Full=Helicase UF1
gi|1008155|emb|CAA89324.1| HCA4 [Saccharomyces cerevisiae]
gi|285812868|tpg|DAA08766.1| TPA: Hca4p [Saccharomyces cerevisiae S288c]
gi|392298402|gb|EIW09499.1| Hca4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 770
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 252/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKQVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 479 YSLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|299115740|emb|CBN74305.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 846
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 251/511 (49%), Gaps = 43/511 (8%)
Query: 371 IPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGG 430
+ P R +P +E+ + P + + L G +T +Q +I L G
Sbjct: 29 VATAPARGTQPFTESTGDRQPFTALP-LSQRTTRGLT-GGGFKTMTEIQVAAIPHALAGR 86
Query: 431 DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC 490
DVL ++TGSGKTLA+ +P+++KL R +I+ DG+ A++I PTREL+LQ E+ +
Sbjct: 87 DVLGAAKTGSGKTLAFLVPLVEKL--YRSRITFGDGLAALVISPTRELSLQIFEVLREFG 144
Query: 491 KSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
K + +TGG+K + E+A + K ++ILVATPGRLL H + T S ++ LVLD
Sbjct: 145 KHH-QLSAGLITGGKKEFREEQASVIK-MNILVATPGRLLQHLEQTPGFDPSLLQVLVLD 202
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS 609
EADRILD G+ + LE L P Q++L SAT T +++ LA ++L+ +
Sbjct: 203 EADRILDMGFRDQLNSILEYLP---PSRQTMLFSATQTKSIKDLARLSLRK----GNVEY 255
Query: 610 TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDM 669
+ D P L Q+++V +L L FI + SKM+VF +
Sbjct: 256 VAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLK-------SKMIVFFTSCAQ 308
Query: 670 ADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLV 729
+ ELL L + LHG + RT+++ F VL+ TD+AARGLD P V
Sbjct: 309 VRFAFELL-CALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSV 367
Query: 730 DWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKD 789
DW++Q AP + Y+HRVGRTAR G +LL ++PSE EE ++ I +K
Sbjct: 368 DWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMMLPSE----EEGVLAGLKPNNIPIKR 423
Query: 790 CLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYAS 849
N V+M G + + A V + ++ A K +TS+VR
Sbjct: 424 LTINPEKVRMAGSVGKKASALVASDPDKKRL---------------AEKSFTSYVRAVQL 468
Query: 850 YSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ F ++ L +A S L AP V
Sbjct: 469 MPN--KQAFRLSELPLEEYAFSLGLAAAPRV 497
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 8/174 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q +I L G DVL ++TGSGKTLA+ +P+++KL R +I+ DG+ A++I P
Sbjct: 71 MTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKL--YRSRITFGDGLAALVISP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRLLDHCK 124
TREL+LQ E+ + K + +TGG+K + E+A + K ++ILVATPGRLL H +
Sbjct: 129 TRELSLQIFEVLREFGKHH-QLSAGLITGGKKEFREEQASVIK-MNILVATPGRLLQHLE 186
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ + LE L P Q++L SAT T
Sbjct: 187 QTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYL---PPSRQTMLFSATQT 237
>gi|396463052|ref|XP_003836137.1| hypothetical protein LEMA_P054780.1 [Leptosphaeria maculans JN3]
gi|312212689|emb|CBX92772.1| hypothetical protein LEMA_P054780.1 [Leptosphaeria maculans JN3]
Length = 848
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 215/389 (55%), Gaps = 29/389 (7%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ +I L G D+L ++TGSGKTL++ IP+++ L ++ + + G+ A+I+ P
Sbjct: 116 MTDVQAKAIPLALLGRDILAAAKTGSGKTLSFLIPVLENLYRLQ-HVGQDAGLGALILSP 174
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q ++ K+ + S L GG+ +++E+ + K +ILVATPGRLL H
Sbjct: 175 TRELAIQIFDVLRKIGRHGHMFSASLLIGGKSLEAERNALPK-TNILVATPGRLLQHLSQ 233
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T ++ LVLDEADRILD G++RD+ ++ L K++ Q++L SAT + V LA
Sbjct: 234 TAMFSADDLKMLVLDEADRILDMGFQRDVDAIIDYLPKER---QTLLFSATQSKKVSDLA 290
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H D P L Q++I+ P + ++ L SFI
Sbjct: 291 RLSLQDP------EYVSVH-AEDKSATPKGLTQNYIICPLEEKMDTLWSFIQAS------ 337
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
++SK+L F +T + E + I +HG Q R E F + K L
Sbjct: 338 -KKSKILCFFSTAKTVRFVYESFRH-MQPGIPLLHIHGRQKQGARLETTAKFSAAKYSCL 395
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVE 773
TDVAARGLD P VD+++Q P Y+HRVGRTAR EG ++FL PSE + +++
Sbjct: 396 FATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVVFLAPSEEEGMLK 455
Query: 774 ELQNRRIRIEEIK--------LKDCLQNL 794
L+ +++ +E I +KD LQN+
Sbjct: 456 RLEAKKVPVEMINVRQKKRTTIKDQLQNM 484
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L G D+L ++TGSGKTL++ IP+++ L ++ + + G+ A+I+ P
Sbjct: 116 MTDVQAKAIPLALLGRDILAAAKTGSGKTLSFLIPVLENLYRLQ-HVGQDAGLGALILSP 174
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q ++ K+ + S L GG+ +++E+ + K +ILVATPGRLL H
Sbjct: 175 TRELAIQIFDVLRKIGRHGHMFSASLLIGGKSLEAERNALPK-TNILVATPGRLLQHLSQ 233
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T ++ LVLDEADRILD G++RD+ ++ L K++ Q++L SAT
Sbjct: 234 TAMFSADDLKMLVLDEADRILDMGFQRDVDAIIDYLPKER---QTLLFSAT 281
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKFS--KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ++T FS ++ LVLDEADRILD G++RD+ ++ L K++ Q++L S
Sbjct: 223 TPGRLLQHLSQTAMFSADDLKMLVLDEADRILDMGFQRDVDAIIDYLPKER---QTLLFS 279
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++LQ+P + +H D P L Q++I+ P + ++ L S
Sbjct: 280 ATQSKKVSDLARLSLQDP------EYVSVH-AEDKSATPKGLTQNYIICPLEEKMDTLWS 332
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI ++SK+L F +T
Sbjct: 333 FIQAS-------KKSKILCFFST 348
>gi|1619952|gb|AAB17005.1| putative RNA helicase [Saccharomyces cerevisiae]
Length = 770
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 252/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKEVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 479 YSLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|26337015|dbj|BAC32191.1| unnamed protein product [Mus musculus]
Length = 462
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 225/402 (55%), Gaps = 31/402 (7%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
T + +FP KK L +G+ Q VT +Q+ +I L G DVL ++TGSGKTLA+
Sbjct: 69 TRFSDFP----LSKKTL-KGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAF 123
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
+P+++ L R + + DG+ +II PTRELA QT E+ K+ K+ + + GG+
Sbjct: 124 LVPVLEAL--YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDF-SAGLIIGGKD 180
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K E RI I+ILV TPGRLL H T + ++ LVLDEADRILD G+ +
Sbjct: 181 LKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAI 239
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L K++ Q++L SAT T +V+ LA ++L++P + +H P +L+
Sbjct: 240 IENLPKKR---QTLLFSATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLE 289
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q++I+ ++ L SF+ + K +VF ++ Y + L I+
Sbjct: 290 QNYIICELHQKISVLFSFLRSHLKK-------KSIVFFSSCKEVQYLYRVFCR-LRPGIS 341
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG Q R EV+ F ++ VL TD+AARGLD P V+W++Q+ P + Y+H
Sbjct: 342 ILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIH 401
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKL 787
R GRTAR +G +LL L+PSE + +V++L +++ ++EIK+
Sbjct: 402 RAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKI 443
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
VT +Q+ +I L G DVL ++TGSGKTLA+ +P+++ L R + + DG+ +II P
Sbjct: 92 VTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL--YRLQWTSTDGLGVLIISP 149
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT E+ K+ K+ + + GG+ +K E RI I+ILV TPGRLL H
Sbjct: 150 TRELAYQTFEVLRKVGKNHDF-SAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDE 207
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAT 181
T + ++ LVLDEADRILD G+ + +E L K++ Q++L SAT T +
Sbjct: 208 TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFSATQTKSV 260
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F + ++ LVLDEADRILD G+ + +E L K++ Q++L S
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q++I+ ++ L S
Sbjct: 254 ATQTKSVKDLARLSLKDP------EYVWVHEKA-KYSTPATLEQNYIICELHQKISVLFS 306
Query: 296 FI 297
F+
Sbjct: 307 FL 308
>gi|367053355|ref|XP_003657056.1| hypothetical protein THITE_2122420 [Thielavia terrestris NRRL 8126]
gi|347004321|gb|AEO70720.1| hypothetical protein THITE_2122420 [Thielavia terrestris NRRL 8126]
Length = 827
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 248/485 (51%), Gaps = 49/485 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ+ +I L G DVL ++TGSGKTLA+ +P+++KL + + DG+ A+II P
Sbjct: 76 LTDVQRAAIPLALKGRDVLGAAKTGSGKTLAFLVPVLEKL--FHAQWTEYDGLGALIISP 133
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 134 TRELAVQIFEVLRKIGRNH-YFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 191
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT + V LA
Sbjct: 192 TAGFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLLFSATQSKRVSDLA 248
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P + +H + +L+Q +IVTP +L L F+ +
Sbjct: 249 RLSLKDP------EYVSVHEAAPTATPA-ALQQSYIVTPLAEKLDTLWGFLRANLK---- 297
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF+++ + E + I LHG Q R E+ F S K L
Sbjct: 298 ---SKIIVFLSSGKQVRFVYESFKR-MQPGIPLLHLHGRQKQVARMEITSRFASAKYSCL 353
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
TDV ARG+D P VDW++Q P + Y+HRVGRTAR +G ++LFL PSE ++
Sbjct: 354 FATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAVLFLEPSEEGFLKR 413
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+++++ I+++ ++ E +++ +S Q +
Sbjct: 414 LEHKKVPIQKVNVR-----------------------EKKKKSIKNELQSLCFQSADVKY 450
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK 894
K + S+ R + Y + + +F F ++ FA+S L P + K ++ + LK
Sbjct: 451 LGQKAFISYTR--SIYLQKDKEVFKFDELDFDGFAESLGLPGTPQI--KFQKGEDVKRLK 506
Query: 895 NKKMA 899
N A
Sbjct: 507 NASRA 511
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ+ +I L G DVL ++TGSGKTLA+ +P+++KL + + DG+ A+II P
Sbjct: 76 LTDVQRAAIPLALKGRDVLGAAKTGSGKTLAFLVPVLEKL--FHAQWTEYDGLGALIISP 133
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 134 TRELAVQIFEVLRKIGRNH-YFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQ 191
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT
Sbjct: 192 TAGFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLLFSAT 239
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + ++ LVLDEADRI+D G++ + +E L K + Q++L SAT + V L
Sbjct: 191 QTAGFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTR---QTLLFSATQSKRVSDL 247
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L++P + +H P +L+Q +IVTP +L L F+ +
Sbjct: 248 ARLSLKDP------EYVSVHEAA-PTATPAALQQSYIVTPLAEKLDTLWGFLRANLK--- 297
Query: 306 EDEESKMLVFMAT 318
SK++VF+++
Sbjct: 298 ----SKIIVFLSS 306
>gi|190409466|gb|EDV12731.1| RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|256271064|gb|EEU06165.1| Hca4p [Saccharomyces cerevisiae JAY291]
gi|323337099|gb|EGA78355.1| Hca4p [Saccharomyces cerevisiae Vin13]
Length = 770
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 252/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKQVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L AP + + G+ + +E KN
Sbjct: 479 YSLGLPGAPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|367014679|ref|XP_003681839.1| hypothetical protein TDEL_0E03850 [Torulaspora delbrueckii]
gi|359749500|emb|CCE92628.1| hypothetical protein TDEL_0E03850 [Torulaspora delbrueckii]
Length = 761
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 253/494 (51%), Gaps = 45/494 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L E + ++T +Q+ SI L G D+L ++TGSGKTLA+ IP+++KL R K +
Sbjct: 54 KGLKEAAFV-KLTEIQRESIPVSLKGHDLLGAAKTGSGKTLAFLIPVLEKL--YREKWTE 110
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+II PTRELA+Q E+ TK+ T + GG+ +K E RI + I+ILV
Sbjct: 111 FDGLGALIISPTRELAMQIYEVLTKIG-GHTSFSAGLVIGGKDVKFELERISR-INILVG 168
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+L H L ++ LVLDEADR LD G+++ + + L P Q++L S
Sbjct: 169 TPGRILQHMDQAVGLNADNLQMLVLDEADRCLDMGFKKTLDAIVSNLP---PSRQTLLFS 225
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALA 642
AT + ++ LA ++L + + AD+ N DS V P++L+Q +IV +L L
Sbjct: 226 ATQSQSLADLARLSLTDYKSVGTADTV---NGGDSEVSTPETLQQSYIVVELADKLDTLF 282
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SFI + SKM+VF+++ + E + I+ LHG Q+ RTE
Sbjct: 283 SFIKTHLK-------SKMIVFLSSSKQVHFVYETFRK-MQPGISLMHLHGRQKQTARTET 334
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F + LI TDV ARG+D P VDW+VQ P Y+HRVGR+AR G +G SL+
Sbjct: 335 LDKFSRAQQVCLIATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRSARYGKQGKSLI 394
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L P+E EE L+ L + K+E + + ++ LQ
Sbjct: 395 MLTPTE----EE--------------GFLKRLKARKIEPSMLTIKQSKKKSIKPQLQ--- 433
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-I 881
S + + L K + S++R + Y + R +F F ++ +A S L AP + I
Sbjct: 434 -SLLFKDPELKYLGQKAFISYIR--SIYIQKDREVFKFDELPTEDYALSLGLPGAPKIKI 490
Query: 882 SGIGKPKNKEELKN 895
G+ + + +KN
Sbjct: 491 KGMKAIERAKTMKN 504
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G D+L ++TGSGKTLA+ IP+++KL R K + DG+ A+II
Sbjct: 63 KLTEIQRESIPVSLKGHDLLGAAKTGSGKTLAFLIPVLEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ T + GG+ +K E RI + I+ILV TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-GHTSFSAGLVIGGKDVKFELERISR-INILVGTPGRILQHMD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNADNLQMLVLDEADRCLDMGFKKTLDAIVSNL---PPSRQTLLFSAT 227
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L ++ LVLDEADR LD G+++ + + L P Q++L SAT + ++ LA ++
Sbjct: 183 LNADNLQMLVLDEADRCLDMGFKKTLDAIVSNL---PPSRQTLLFSATQSQSLADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 308
L + + AD+ N DS V P++L+Q +IV +L L SFI +
Sbjct: 240 LTDYKSVGTADTV---NGGDSEVSTPETLQQSYIVVELADKLDTLFSFIKTHLK------ 290
Query: 309 ESKMLVFMAT 318
SKM+VF+++
Sbjct: 291 -SKMIVFLSS 299
>gi|401883322|gb|EJT47536.1| hypothetical protein A1Q1_03595 [Trichosporon asahii var. asahii
CBS 2479]
Length = 795
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 230/434 (52%), Gaps = 34/434 (7%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLN--EGMNITQVTTVQQLSIQPILDGGDVLV 434
R L+ + AP+ EF + P + L + + T +Q LSI P L G D++
Sbjct: 44 RELQAKIDNYVAPSEITEFKQL-PLSQPTLRGLKKAHFVNPTPIQALSIPPALKGQDIMG 102
Query: 435 RSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFT 494
++TGSGKTLA+ IPI+++L K + DG+ AV+I PTRELA+QT F LC
Sbjct: 103 SARTGSGKTLAFLIPILERL--FIHKWGQMDGLGAVVISPTRELAMQT---FNALCSIGM 157
Query: 495 W--IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEAD 552
+ + GG+ +K E+ R+ + ++IL+ATPGRLL H T + + ++ LVLDEAD
Sbjct: 158 YHNFSAGLVIGGKPLKEERDRLSR-MNILIATPGRLLQHLDSTVGFESAGLKMLVLDEAD 216
Query: 553 RILDQGYERDIAEFLEILKKQKP-----QFQSILLSATLTPAVQRLAGMTLQNPIQIDAA 607
R+LD G+ + I+K P Q++L SAT + + LA ++L +P+ I+
Sbjct: 217 RLLDMGF---LPALRAIVKHFSPGGHNASRQTLLFSATQSKDLATLAKLSLHDPLYINT- 272
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQ 667
+ + V+P +L+Q + V P + +L AL FI + K +VF+ +
Sbjct: 273 -----NKPGEEGVMPSNLEQFYTVVPLERKLDALWGFIKTHLK-------MKGVVFVTSG 320
Query: 668 DMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLP 727
+ E L + LHG Q R E+F F S S +LICTD+AARGLD P
Sbjct: 321 KQVRFIFETFRR-LHPGLPLMHLHGKQKQPTRMEIFAKFSSSNSALLICTDIAARGLDFP 379
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIK 786
VDW+VQ P Y+HRVGRTAR EG L L+PSE + ++ + I +++IK
Sbjct: 380 AVDWVVQLDCPDDVDSYIHRVGRTARYQSEGKGLCILLPSEEEGMLARWAEKGIEVKKIK 439
Query: 787 LKDCLQNLLSVKME 800
+K+ L +M+
Sbjct: 440 IKESKMGNLEQQMQ 453
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 16/177 (9%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q LSI P L G D++ ++TGSGKTLA+ IPI+++L K + DG+ AV+I PT
Sbjct: 84 TPIQALSIPPALKGQDIMGSARTGSGKTLAFLIPILERL--FIHKWGQMDGLGAVVISPT 141
Query: 67 RELALQTLEIFTKLCKSFTW--IVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
RELA+QT F LC + + GG+ +K E+ R+ + ++IL+ATPGRLL H
Sbjct: 142 RELAMQT---FNALCSIGMYHNFSAGLVIGGKPLKEERDRLSR-MNILIATPGRLLQHLD 197
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKP-----QFQSILLSAT 176
T + + ++ LVLDEADR+LD G+ + I+K P Q++L SAT
Sbjct: 198 STVGFESAGLKMLVLDEADRLLDMGF---LPALRAIVKHFSPGGHNASRQTLLFSAT 251
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 88 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH----CKHTETLKFSKVEHLVLDEAD 143
+P L G + M S + K ++ L+ RL H + S L + +
Sbjct: 91 IPPALKGQDIMGSARTGSGKTLAFLIPILERLFIHKWGQMDGLGAVVISPTRELAMQTFN 150
Query: 144 RILDQGYERDIAEFLEI----LKKQKPQFQ--SILLSATLTPATCWCKHTETLKF--SKV 195
+ G + + L I LK+++ + +IL++ TP T+ F + +
Sbjct: 151 ALCSIGMYHNFSAGLVIGGKPLKEERDRLSRMNILIA---TPGRLLQHLDSTVGFESAGL 207
Query: 196 EHLVLDEADRILDQGYERDIAEFLEILKKQKP-----QFQSVLLSATLTPAVQRLAGMTL 250
+ LVLDEADR+LD G+ + I+K P Q++L SAT + + LA ++L
Sbjct: 208 KMLVLDEADRLLDMGF---LPALRAIVKHFSPGGHNASRQTLLFSATQSKDLATLAKLSL 264
Query: 251 QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
+P+ I+ + + V+P +L+Q + V P + +L AL FI
Sbjct: 265 HDPLYINT------NKPGEEGVMPSNLEQFYTVVPLERKLDALWGFI 305
>gi|7716794|gb|AAF68547.1|AF252764_1 helicase pitchoune [Drosophila simulans]
Length = 375
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 227/413 (54%), Gaps = 48/413 (11%)
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T ++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L
Sbjct: 122 ATQTARIEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLF 174
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ YH EL + + ++ +HG Q++RT
Sbjct: 175 TFL-------KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTT 224
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +L
Sbjct: 225 FFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHAL 284
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L + P E+ + L+ ++ + E E ++AD +Q+
Sbjct: 285 LLMRPEELGFLRYLKAAKVPLNE--------------FEFSWQKIAD---------IQLQ 321
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
E + + L+ SA + + S+VR Y S+ L+ IFN + L AKSF
Sbjct: 322 LEKLIAKNYFLNQSAKEAFKSYVRAYDSHQ--LKXIFNVNTLDLQAVAKSFGF 372
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 14/194 (7%)
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQ 225
AT T A LK + V D D L+QGY E+ + LKK
Sbjct: 122 ATQT-ARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKN 180
Query: 226 KPQFQSVLLSATLT 239
+ + V S+ ++
Sbjct: 181 RKKKVMVFFSSCMS 194
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 81 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 137
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 138 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 183
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 184 KVMVFFSSCMSVKYHHELFN 203
>gi|302784512|ref|XP_002974028.1| hypothetical protein SELMODRAFT_874 [Selaginella moellendorffii]
gi|300158360|gb|EFJ24983.1| hypothetical protein SELMODRAFT_874 [Selaginella moellendorffii]
Length = 457
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 241/466 (51%), Gaps = 46/466 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ ++ L G D+L ++TGSGKTLA+ IP+I+KL +R + DG+ A+II P
Sbjct: 24 MTDIQRAALPHALCGRDILGAAKTGSGKTLAFLIPVIEKLYRLR--WTSMDGVGALIISP 81
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q + K+ K F + L GG K S + + G++ILV TPGRLL H
Sbjct: 82 TRELAMQIFDELRKVGK-FHDLSGGLLIGGRKDVSTEKQSVNGLNILVCTPGRLLQHMHE 140
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T S ++ LVLDEADRILD G+ + + + + K++ Q+ L SAT T +VQ LA
Sbjct: 141 TVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKER---QTFLFSATQTRSVQDLA 197
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H + ++ P L+Q +V P ++ L SFI
Sbjct: 198 RLSLQSP------EYLAVHAES-AVATPARLQQTVMVVPLDQKIDTLWSFI-------KS 243
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+K+LVF+++ + E L + LHG + Q R + F F + V+
Sbjct: 244 HLRAKVLVFLSSCKQVKFVYEAFKH-LRPGVPLTCLHGRLRQGGRLDAFYKFVEAEYAVM 302
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
TD+AARGLD P VDW+VQ P Y+HRVGRTAR G SLL L PSE K+V
Sbjct: 303 FATDIAARGLDFPTVDWVVQADCPEDVATYIHRVGRTARYKASGRSLLLLSPSETKMVAL 362
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +I I+ +K + +S + G LS+ AD L
Sbjct: 363 LEEAKIPIKVLKPNEKKIQSVSQLISGLLSKNAD-----------------------LKH 399
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A + +T+++R + Y + + +F+ ++ + +A S L P V
Sbjct: 400 MAQRAFTTYLR--SVYLQGNKEVFDVHKLPIPEYAASLGLPSVPRV 443
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ ++ L G D+L ++TGSGKTLA+ IP+I+KL +R + DG+ A+II P
Sbjct: 24 MTDIQRAALPHALCGRDILGAAKTGSGKTLAFLIPVIEKLYRLR--WTSMDGVGALIISP 81
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q + K+ K F + L GG K S + + G++ILV TPGRLL H
Sbjct: 82 TRELAMQIFDELRKVGK-FHDLSGGLLIGGRKDVSTEKQSVNGLNILVCTPGRLLQHMHE 140
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ + + + + K++ Q+ L SAT T
Sbjct: 141 TVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKER---QTFLFSATQT 190
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET+ F S ++ LVLDEADRILD G+ + + + + K++ Q+ L S
Sbjct: 130 TPGRLLQHMHETVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKER---QTFLFS 186
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +VQ LA ++LQ+P + +H + ++ P L+Q +V P ++ L S
Sbjct: 187 ATQTRSVQDLARLSLQSP------EYLAVHAES-AVATPARLQQTVMVVPLDQKIDTLWS 239
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI +K+LVF+++
Sbjct: 240 FI-------KSHLRAKVLVFLSS 255
>gi|7716790|gb|AAF68545.1|AF252762_1 helicase pitchoune [Drosophila simulans]
Length = 375
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 225/412 (54%), Gaps = 46/412 (11%)
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T ++ L+ + L++ + +H+ D+ + D L+Q +IV P + RL+ L +
Sbjct: 122 ATQTARIEALSKLALKS-----EPNYVGVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFT 175
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ ++ + K++VF ++ YH EL + + ++ +HG Q++RT F
Sbjct: 176 FL-------KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTF 225
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLL 762
F + +SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL
Sbjct: 226 FQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALL 285
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
+ P E+ + L+ ++ + E E ++AD +Q+
Sbjct: 286 LMRPEELGFLRYLKAAKVPLNE--------------FEFSWQKIAD---------IQLQL 322
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
E + + L+ SA + + S+VR Y S+ L+ IFN + L AKSF
Sbjct: 323 EKLIAKNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGF 372
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 77/124 (62%), Gaps = 4/124 (3%)
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 175 ATLT 178
AT T
Sbjct: 122 ATQT 125
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 79/139 (56%), Gaps = 16/139 (11%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 81 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 137
Query: 252 NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESK 311
+ + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ + K
Sbjct: 138 S-----EPNYVGVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKKK 184
Query: 312 MLVFMATQDMADYHTELLS 330
++VF ++ YH EL +
Sbjct: 185 VMVFFSSCMSVKYHHELFN 203
>gi|255563905|ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223537764|gb|EEF39382.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 753
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/417 (37%), Positives = 234/417 (56%), Gaps = 28/417 (6%)
Query: 373 NVPTRRLKPVSEALFAP-TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGD 431
N P RL + + +A T ++E P + K L + IT +T +Q+ S+ L G D
Sbjct: 47 NSPIGRLPDGTFSRYAGCTKFKELP-LSKRTKDGLTKAGYIT-MTEIQRASLPHSLCGRD 104
Query: 432 VLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCK 491
+L ++TGSGKTLA+ IP+++KL R + +DG+ ++II PTRELA Q ++ + K
Sbjct: 105 ILGAAKTGSGKTLAFVIPVLEKLH--RERWGPQDGVGSIIISPTRELAGQLFDVLRNVGK 162
Query: 492 SFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDE 550
F L GG K + +EK + + ++ILV TPGRLL H T S+++ LVLDE
Sbjct: 163 -FHNFSAGLLIGGRKDIDTEKESVNE-LNILVCTPGRLLQHMDETPNFDCSQLQVLVLDE 220
Query: 551 ADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADST 610
ADRILD G+++ + + + K + Q++L SAT T +VQ LA ++L++P +
Sbjct: 221 ADRILDVGFKKTLNAIISQIPKYR---QTLLFSATQTKSVQDLARLSLKDP------EYV 271
Query: 611 DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 670
+H +D+ P+ L+Q +V P + +L L SFI S +LVF+++
Sbjct: 272 GVHEKSDT-ATPNRLQQTAMVVPLEQKLDMLWSFIKAHLN-------SNILVFLSSCKQV 323
Query: 671 DYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL-PLV 729
+ E L I LHG M Q +R ++ F +S VL TDVAARGLD V
Sbjct: 324 KFVYEAFKK-LHPGIPLKCLHGRMKQGKRMVIYSQFCEQRS-VLFSTDVAARGLDFNKAV 381
Query: 730 DWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
DW+VQ P Y+HRVGRTAR G S+LFL+PSE+K++E+LQ ++ I+ IK
Sbjct: 382 DWVVQVDCPEDVASYIHRVGRTARYQSGGRSVLFLLPSEMKMLEKLQEAKVPIQFIK 438
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 107/174 (61%), Gaps = 8/174 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ S+ L G D+L ++TGSGKTLA+ IP+++KL R + +DG+ ++II P
Sbjct: 88 MTEIQRASLPHSLCGRDILGAAKTGSGKTLAFVIPVLEKLH--RERWGPQDGVGSIIISP 145
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRLLDHCK 124
TRELA Q ++ + K F L GG K + +EK + + ++ILV TPGRLL H
Sbjct: 146 TRELAGQLFDVLRNVGK-FHNFSAGLLIGGRKDIDTEKESVNE-LNILVCTPGRLLQHMD 203
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S+++ LVLDEADRILD G+++ + + + K + Q++L SAT T
Sbjct: 204 ETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQIPKYR---QTLLFSATQT 254
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S+++ LVLDEADRILD G+++ + + + K + Q++L S
Sbjct: 194 TPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQIPKYR---QTLLFS 250
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +VQ LA ++L++P + +H +D+ P+ L+Q +V P + +L L S
Sbjct: 251 ATQTKSVQDLARLSLKDP------EYVGVHEKSDT-ATPNRLQQTAMVVPLEQKLDMLWS 303
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI S +LVF+++
Sbjct: 304 FIKAHLN-------SNILVFLSS 319
>gi|297263806|ref|XP_001098453.2| PREDICTED: ATP-dependent RNA helicase DDX55-like isoform 1 [Macaca
mulatta]
Length = 743
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 237/456 (51%), Gaps = 48/456 (10%)
Query: 438 TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIV 497
TGSGKTLA+ IPI++ L K+ +K + A+II PTRELA+Q E+ + K F
Sbjct: 198 TGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITPTRELAVQIDEVLSHFTKHFPQFS 256
Query: 498 PSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEA 551
GG + R ++ G +I+VATPGRL D + E L + ++ LVLDEA
Sbjct: 257 QILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEA 316
Query: 552 DRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTD 611
DR+LD G+E I LE L KQ+ ++ L SAT T V+ L L+NP+++ +
Sbjct: 317 DRLLDMGFEASINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGV 373
Query: 612 IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMAD 671
+ P L+ +++V + L F+ + Q K LVF +T +
Sbjct: 374 AASGAQK--TPSRLENYYMVCKADEKFNQLVHFLRNRKQ-------EKHLVFFSTCACVE 424
Query: 672 YHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDW 731
Y+ + L ++ + + +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W
Sbjct: 425 YYGKALEALV-KGVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNW 482
Query: 732 IVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDC 790
++QY PS+++ +VHR GRTAR+GH GS+L+FL+P E + L N++ ++E+KL+
Sbjct: 483 VLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQRN 542
Query: 791 LQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASY 850
+LL +S L + + K + S+V+ YA +
Sbjct: 543 TVDLLP------------------------KLKSMALADRAVFEKGMKAFVSYVQAYAKH 578
Query: 851 SKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
+L IF K + A+ FAL P + GK
Sbjct: 579 ECNL--IFRLKDLDFASLAQGFALLRMPKMPELRGK 612
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 127/302 (42%), Gaps = 70/302 (23%)
Query: 29 TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIV 88
TGSGKTLA+ IPI++ L K+ +K + A+II PTRELA+Q E+ + K F
Sbjct: 198 TGSGKTLAFVIPILEILLRREEKL-KKSQVGAIIITPTRELAVQIDEVLSHFTKHFPQFS 256
Query: 89 PSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 147
GG + R ++ G +I+VATPGRL D + K E L L R LD
Sbjct: 257 QILWIGGRNPGEDVERFKQQGGNIIVATPGRLEDMFRR-------KAEGLDLASCVRSLD 309
Query: 148 QGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRIL 207
LVLDEADR+L
Sbjct: 310 V-------------------------------------------------LVLDEADRLL 320
Query: 208 DQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT 267
D G+E I LE L KQ+ ++ L SAT T V+ L L+NP+++ + +
Sbjct: 321 DMGFEASINTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASG 377
Query: 268 TDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 327
P L+ +++V + L F+ + Q K LVF +T +Y+ +
Sbjct: 378 AQK--TPSRLENYYMVCKADEKFNQLVHFLRNRKQ-------EKHLVFFSTCACVEYYGK 428
Query: 328 LL 329
L
Sbjct: 429 AL 430
>gi|302803420|ref|XP_002983463.1| hypothetical protein SELMODRAFT_730 [Selaginella moellendorffii]
gi|300148706|gb|EFJ15364.1| hypothetical protein SELMODRAFT_730 [Selaginella moellendorffii]
Length = 457
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 241/466 (51%), Gaps = 46/466 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ ++ L G D+L ++TGSGKTLA+ IP+I+KL +R + DG+ A+II P
Sbjct: 24 MTDIQRAALPHALCGRDILGAAKTGSGKTLAFLIPVIEKLYRLR--WTSMDGVGALIISP 81
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q + K+ K F + L GG K S + + G++ILV TPGRLL H
Sbjct: 82 TRELAMQIFDELRKVGK-FHDLSGGLLIGGRKDVSIEKQSVNGLNILVCTPGRLLQHMHE 140
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T S ++ LVLDEADRILD G+ + + + + K++ Q+ L SAT T +VQ LA
Sbjct: 141 TVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKER---QTFLFSATQTRSVQDLA 197
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++LQ+P + +H + ++ P L+Q +V P ++ L SFI
Sbjct: 198 RLSLQSP------EYLAVHAES-AVATPARLQQTVMVVPLDQKIDTLWSFI-------KS 243
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
+K+LVF+++ + E L + LHG + Q R + F F + V+
Sbjct: 244 HLRAKVLVFLSSCKQVKFVYEAFKH-LRPGVPLTCLHGRLKQGGRLDAFYKFVEAEYAVM 302
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
TD+AARGLD P VDW+VQ P Y+HRVGRTAR G SLL L PSE K+V
Sbjct: 303 FATDIAARGLDFPTVDWVVQADCPEDVATYIHRVGRTARYKASGRSLLLLSPSETKMVAL 362
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +I I+ +K + +S + G LS+ AD L
Sbjct: 363 LEEAKIPIKVLKPNEKKIQSVSQLISGLLSKNAD-----------------------LKY 399
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A + +T+++R + Y + + +F+ ++ + +A S L P V
Sbjct: 400 MAQRAFTTYLR--SVYLQGNKEVFDVHKLPIPEYAASLGLPSVPRV 443
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ ++ L G D+L ++TGSGKTLA+ IP+I+KL +R + DG+ A+II P
Sbjct: 24 MTDIQRAALPHALCGRDILGAAKTGSGKTLAFLIPVIEKLYRLR--WTSMDGVGALIISP 81
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q + K+ K F + L GG K S + + G++ILV TPGRLL H
Sbjct: 82 TRELAMQIFDELRKVGK-FHDLSGGLLIGGRKDVSIEKQSVNGLNILVCTPGRLLQHMHE 140
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ + + + + K++ Q+ L SAT T
Sbjct: 141 TVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKER---QTFLFSATQT 190
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%), Gaps = 36/239 (15%)
Query: 82 KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDE 141
K+ +++P EK+ + G+ L+ +P R L E K K D
Sbjct: 51 KTLAFLIPVI----EKLYRLRWTSMDGVGALIISPTRELAMQIFDELRKVGKFH----DL 102
Query: 142 ADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETLKF--SKVEHLV 199
+ +L G +D++ ++KQ +IL+ TP ET+ F S ++ LV
Sbjct: 103 SGGLLIGG-RKDVS-----IEKQSVNGLNILVC---TPGRLLQHMHETVNFDCSPLKLLV 153
Query: 200 LDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAA 259
LDEADRILD G+ + + + + K++ Q+ L SAT T +VQ LA ++LQ+P
Sbjct: 154 LDEADRILDMGFAGTLNQIIAQIPKER---QTFLFSATQTRSVQDLARLSLQSP------ 204
Query: 260 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMAT 318
+ +H + ++ P L+Q +V P ++ L SFI +K+LVF+++
Sbjct: 205 EYLAVHAES-AVATPARLQQTVMVVPLDQKIDTLWSFI-------KSHLRAKVLVFLSS 255
>gi|15240418|ref|NP_200302.1| DEAD-box ATP-dependent RNA helicase 32 [Arabidopsis thaliana]
gi|75333773|sp|Q9FFT9.1|RH32_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 32
gi|9758271|dbj|BAB08770.1| RNA helicase-like protein [Arabidopsis thaliana]
gi|332009172|gb|AED96555.1| DEAD-box ATP-dependent RNA helicase 32 [Arabidopsis thaliana]
Length = 739
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 260/502 (51%), Gaps = 61/502 (12%)
Query: 390 TSYEEFPGIHPFM--------KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSG 441
T + + G+ F K+ L + + +T VQ +I L G D+L ++TGSG
Sbjct: 62 TVFSRYAGVRKFAQLPISDKTKRGLKDAKYV-DMTDVQSAAIPHALCGRDILGAARTGSG 120
Query: 442 KTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
KTLA+ IPI++KL R + S +DG+ +II PTRELA QT + K+ K + +
Sbjct: 121 KTLAFVIPILEKLH--RERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLI 178
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYER 561
G E + EK R+ + ++ILV PGRLL H T + +++ L+LDEADR+LD ++
Sbjct: 179 GGREGVDVEKERVHE-MNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKG 237
Query: 562 DIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSL 619
+ + L K + Q++L SAT T V+ LA ++L++P I + A T
Sbjct: 238 QLDPIISQLPKHR---QTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVT--------- 285
Query: 620 VIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 679
P SL Q ++ P + +L L SFI ++N S++LVF++T+ + E +
Sbjct: 286 ATPTSLMQTVMIVPVEKKLDMLWSFI---KTHLN----SRILVFLSTKKQVKFVHEAFNK 338
Query: 680 VLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL-PLVDWIVQYTAP 738
L I LHG MSQ +R V+ F +S VL CTDV ARGLD VDW+VQ P
Sbjct: 339 -LRPGIPLKSLHGKMSQEKRMGVYSQFIERQS-VLFCTDVLARGLDFDKAVDWVVQVDCP 396
Query: 739 SSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVK 798
Y+HRVGRTAR +G SLLFL PSE K++E+LQ ++ I+ IK + Q L V
Sbjct: 397 EDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPIKLIKANN--QKLQEV- 453
Query: 799 MEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIF 858
SRL AL + + L A + + +++R + + + + IF
Sbjct: 454 -----SRL--------LAALLVKYPD-------LQGVAQRAFITYLR--SIHKRRDKEIF 491
Query: 859 NFKQIHLGHFAKSFALRDAPSV 880
+ ++ + +F+ S L P +
Sbjct: 492 DVSKLSIENFSASLGLPMTPRI 513
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L G D+L ++TGSGKTLA+ IPI++KL R + S +DG+ +II P
Sbjct: 94 MTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLH--RERWSPEDGVGCIIISP 151
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA QT + K+ K + + G E + EK R+ + ++ILV PGRLL H
Sbjct: 152 TRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHE-MNILVCAPGRLLQHMDE 210
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + +++ L+LDEADR+LD ++ + + L K + Q++L SAT T
Sbjct: 211 TPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHR---QTLLFSATQT 260
>gi|170578246|ref|XP_001894333.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158599154|gb|EDP36845.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 797
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 258/501 (51%), Gaps = 60/501 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
TS+ P + ++ L E N T +Q+ S+Q L G DV+ ++TGSGKTLA+ IP
Sbjct: 49 TSFSRMP-LSGSTQRGLAEN-NFINPTDIQRESLQYSLTGADVVGAAKTGSGKTLAFLIP 106
Query: 450 ------IIQKLQEMRPKISRK-DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
+++ L R + SR DG+ A+II PTRELA QT ++ K+ + V + L
Sbjct: 107 ASFXHAVLECL--WRQRWSRTVDGLGALIISPTRELAFQTFQVLNKIGAHHNFSV-AVLI 163
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GG ++ E RI ++I+V TPGRLL H T +++ LV+DEADRILD G+ R
Sbjct: 164 GGTDVEFESKRI-GSVNIVVCTPGRLLQHMDENSTFSCEQLQILVIDEADRILDLGFSRQ 222
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIP 622
+ LE L K + Q++L SAT T V+ L + L++P+ I A ++ P
Sbjct: 223 MNAILENLPKNR---QTLLFSATQTKNVKDLVRLALRDPLYISAHENA-------PQATP 272
Query: 623 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG 682
+SL+Q + V + +L AL SF+L + K L+F++ A + TE L
Sbjct: 273 ESLQQSYFVCSDEDKLNALWSFLLNH-------RKKKSLIFVSCCKQARFLTEAFCH-LR 324
Query: 683 ENIAFFKLHGSMSQSERTEVFKTFRSVKSGV-LICTDVAARGLDLPLVDWIVQYTAPSSS 741
++ L G+M+Q +R EVFK F + G +I TDVA+RGLD VD ++Q P
Sbjct: 325 PGLSLMGLWGTMNQMKRLEVFKKFNNKTYGAAMIATDVASRGLDFARVDIVLQLDCPVDV 384
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKME 800
DY+HRVGRTAR+ +G ++L L P+ E ++ LQ R I I +I + + K
Sbjct: 385 DDYIHRVGRTARMDAKGEAILXLTPAQEQAMLTRLQARNILITKISVNE--------KQI 436
Query: 801 GDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFN 859
D+S+ +S + Q + A + + +++R Y +KD +FN
Sbjct: 437 MDISK---------------RLQSVIAQYPGMKEFAQRSFVAYIRTIYLMRNKD---VFN 478
Query: 860 FKQIHLGHFAKSFALRDAPSV 880
+ L AKS+ L P V
Sbjct: 479 LDTVDLASLAKSYGLAATPRV 499
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 108/184 (58%), Gaps = 14/184 (7%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP------IIQKLQEMRPKISRK 55
N T +Q+ S+Q L G DV+ ++TGSGKTLA+ IP +++ L R + SR
Sbjct: 68 NFINPTDIQRESLQYSLTGADVVGAAKTGSGKTLAFLIPASFXHAVLECL--WRQRWSRT 125
Query: 56 -DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
DG+ A+II PTRELA QT ++ K+ + V + L GG ++ E RI ++I+V
Sbjct: 126 VDGLGALIISPTRELAFQTFQVLNKIGAHHNFSV-AVLIGGTDVEFESKRI-GSVNIVVC 183
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRLL H T +++ LV+DEADRILD G+ R + LE L K + Q++L S
Sbjct: 184 TPGRLLQHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILENLPKNR---QTLLFS 240
Query: 175 ATLT 178
AT T
Sbjct: 241 ATQT 244
Score = 64.7 bits (156), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 17/139 (12%)
Query: 189 TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGM 248
T +++ LV+DEADRILD G+ R + LE L K + Q++L SAT T V+ L +
Sbjct: 197 TFSCEQLQILVIDEADRILDLGFSRQMNAILENLPKNR---QTLLFSATQTKNVKDLVRL 253
Query: 249 TLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 308
L++P+ I A ++ P+SL+Q + V + +L AL SF+L
Sbjct: 254 ALRDPLYISAHENA-------PQATPESLQQSYFVCSDEDKLNALWSFLLNH-------R 299
Query: 309 ESKMLVFMATQDMADYHTE 327
+ K L+F++ A + TE
Sbjct: 300 KKKSLIFVSCCKQARFLTE 318
>gi|356568033|ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine
max]
Length = 589
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 242/474 (51%), Gaps = 45/474 (9%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVII 472
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ PK + + +II
Sbjct: 38 CTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVVPLVEILRRSSSHPKPHQ---VLGIII 94
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDH 531
PTREL+ Q + + + L GG ++K++ +I + G +IL+ TPGRL D
Sbjct: 95 SPTRELSTQIYHVAQPFISTLANVKSMLLVGGAEVKADLKKIEEEGANILIGTPGRLYDI 154
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
+ L +E L+LDEADR+LD G+++ I + +L K + ++ L SAT T A++
Sbjct: 155 MNRMDVLDLKNLEILILDEADRLLDMGFQKQITSIITLLPKLR---RTGLFSATQTEAIE 211
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK-CQ 650
LA L+NP++++ T N S P+S K TP L + L K Q
Sbjct: 212 ELAKAGLRNPVRVEVRAETKSENGPASSKQPESSK-----TPSGLHIEYLECEADKKPSQ 266
Query: 651 NVN---EDEESKMLVFMATQDMADYHTELLSTV-LGENIAFFKLHGSMSQSERTEVFKTF 706
V+ ++ K++++ T DY +L + + + + LHG M QS R + +F
Sbjct: 267 LVHILIKNLSKKIIIYFMTCACVDYWGAVLPCLSVLKGFSLIPLHGKMKQSAREKALASF 326
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP 766
S+ +G+L+CTDVAARGLD+P VD IVQY P ++HRVGRTAR+G +G +++FL+P
Sbjct: 327 TSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFIHRVGRTARLGKQGHAVVFLLP 386
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E VE L+ RR+ ++E D A+ + SA
Sbjct: 387 KEESYVEFLRIRRVPLQERICAD------------------------EASDVVPQIRSAA 422
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + + K + S++R Y + +IF +K++ +G A F L PS+
Sbjct: 423 KKDRDVMEKGIKAFVSYIRAYKEHH--CSYIFRWKELEIGKLATGFGLLQLPSM 474
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVII 63
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ PK + + +II
Sbjct: 38 CTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVVPLVEILRRSSSHPKPHQ---VLGIII 94
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDH 122
PTREL+ Q + + + L GG ++K++ +I + G +IL+ TPGRL D
Sbjct: 95 SPTRELSTQIYHVAQPFISTLANVKSMLLVGGAEVKADLKKIEEEGANILIGTPGRLYDI 154
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ L +E L+LDEADR+LD G+++ I + +L K + ++ L SAT T A
Sbjct: 155 MNRMDVLDLKNLEILILDEADRLLDMGFQKQITSIITLLPKLR---RTGLFSATQTEA 209
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 155 AEFLEILKKQKPQFQSILLSATLTPATCW--CKHTETLKFSKVEHLVLDEADRILDQGYE 212
AE LKK + + +IL+ TP + + L +E L+LDEADR+LD G++
Sbjct: 127 AEVKADLKKIEEEGANILIG---TPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQ 183
Query: 213 RDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV 272
+ I + +L K + ++ L SAT T A++ LA L+NP++++ T N S
Sbjct: 184 KQITSIITLLPKLR---RTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSENGPASSK 240
Query: 273 IPDSLK 278
P+S K
Sbjct: 241 QPESSK 246
>gi|346473309|gb|AEO36499.1| hypothetical protein [Amblyomma maculatum]
Length = 499
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 254/497 (51%), Gaps = 51/497 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
IH ++K + E + ++T VQ +I L DV V + TGSGKTLA+ IP+++ L
Sbjct: 17 IHDEVRKAVQE-LKFEEMTPVQATAIPLFLSNKDVAVEAVTGSGKTLAFLIPLLEILLR- 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG-EKMKSEKARIRK 516
R + K G+ A++I PTRELA Q + + LTGG + KA
Sbjct: 75 RDEPLPKYGVGAIVISPTRELATQIYSVLNHFLQFVPQFTGQLLTGGYNPINDVKAFKEN 134
Query: 517 GISILVATPGRLLDHC-KHTETLKFSK----VEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I+VATPGR++D + E F+ +E LVLDEADR+LD G+E+ I L L
Sbjct: 135 GANIIVATPGRMVDMLERKDENFSFAACVKHLEVLVLDEADRLLDMGFEKSINTILSFLP 194
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADS-TDIHNTTDSLVIPDSLKQHFI 630
KQ+ ++ L SAT T V+ L L+NP+ + + TD T + P LK +I
Sbjct: 195 KQR---RTGLFSATQTKEVEDLIRAGLRNPVSVTVKEKPTDSSRTQRT---PALLKNFYI 248
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
+ +L L +F+ + K +VF +T +Y + +L +L +N+ +
Sbjct: 249 LCEADQKLSTLVAFL-------RSHSDEKHMVFFSTCACVEYFSAVLVQLL-KNMTVIHI 300
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG M + +R +VF F + GVL+CTDV ARG+D+P V W++QY AP SS+ ++HR GR
Sbjct: 301 HGKM-KGKRQKVFNRFMKMDKGVLVCTDVMARGVDIPDVHWVLQYDAPKSSSSFIHRSGR 359
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
TAR+G+EG+++L L+P+E V L+ N+++ +EE+
Sbjct: 360 TARMGNEGNAVLLLMPTEDAYVTFLELNQKVMLEEM------------------------ 395
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
N + + + ++ + ++ + + S+++ Y+ + L +F K + A
Sbjct: 396 NPPPVVSEVTSKVKKMAMKDRAIYEKGIRAFVSYIQAYSKHECYL--LFRIKDLDFAKVA 453
Query: 870 KSFALRDAPSVISGIGK 886
+ FAL P + GK
Sbjct: 454 EGFALLKMPYMPELRGK 470
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 144/331 (43%), Gaps = 72/331 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++T VQ +I L DV V + TGSGKTLA+ IP+++ L R + K G+ A
Sbjct: 28 LKFEEMTPVQATAIPLFLSNKDVAVEAVTGSGKTLAFLIPLLEILLR-RDEPLPKYGVGA 86
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG-EKMKSEKARIRKGISILVATPGRL 119
++I PTRELA Q + + LTGG + KA G +I+VATPGR+
Sbjct: 87 IVISPTRELATQIYSVLNHFLQFVPQFTGQLLTGGYNPINDVKAFKENGANIIVATPGRM 146
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
+D +L+++ F +
Sbjct: 147 VD--------------------------------------MLERKDENF---------SF 159
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
A C KH E L VLDEADR+LD G+E+ I L L KQ+ ++ L SAT T
Sbjct: 160 AAC-VKHLEVL--------VLDEADRLLDMGFEKSINTILSFLPKQR---RTGLFSATQT 207
Query: 240 PAVQRLAGMTLQNPIQIDAADS-TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 298
V+ L L+NP+ + + TD T + P LK +I+ +L L +F+
Sbjct: 208 KEVEDLIRAGLRNPVSVTVKEKPTDSSRTQRT---PALLKNFYILCEADQKLSTLVAFL- 263
Query: 299 GKCQNVNEDEESKMLVFMATQDMADYHTELL 329
+ K +VF +T +Y + +L
Sbjct: 264 ------RSHSDEKHMVFFSTCACVEYFSAVL 288
>gi|157135755|ref|XP_001663578.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108870126|gb|EAT34351.1| AAEL013400-PA [Aedes aegypti]
Length = 727
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 255/495 (51%), Gaps = 56/495 (11%)
Query: 390 TSYEEFPGIHPFMKKNLNEGMNITQV---TTVQQLSIQPILDGGDVLVRSQTGSGKTLAY 446
+S+ +FP KK L G+ Q T +Q+ SI P L G D+L ++TGSGKTLA+
Sbjct: 62 SSFSDFP----LSKKTLG-GLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAF 116
Query: 447 AIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK 506
IP+ +KL + ++ DG+ A+II PTRELALQ E K+ K + + GG+
Sbjct: 117 LIPVFEKL--YTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDFTT-GLIIGGQN 173
Query: 507 MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEF 566
+K+EK R+ + ++I++ TPGRLL H + ++ LVLDEADR LD G+E +
Sbjct: 174 LKAEKNRLHQ-LNIIICTPGRLLQHMDQNPLFDCTNLKILVLDEADRCLDLGFESAMNAI 232
Query: 567 LEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLK 626
+E L ++ Q++L SAT T +V+ LA + L+NP I + + P L+
Sbjct: 233 IENLPSER---QTLLFSATQTKSVKDLARLNLRNPQYIAPHEK-------EQYTTPTRLQ 282
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q+++ +L L SF+ + K++VF AT Y E+ L +
Sbjct: 283 QNYVAVELGQKLTMLWSFLKAHSKQ-------KIIVFFATCKQVKYFYEVFRK-LRPSTL 334
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
L+G M+Q R +++ F + + L+ TDVA+RGLD P V+W+VQ P + Y+H
Sbjct: 335 LLPLYGGMNQERRNKIYTEFCTKSNVCLLATDVASRGLDFPKVNWVVQLDCPEDANQYIH 394
Query: 747 RVGRTARVGHEGSSLLFLIPSEV-KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
R GRTAR+ G SLL L+P E +V+ L+ ++ I +I + D + L S ++
Sbjct: 395 RAGRTARLNTSGESLLVLLPQEEGGVVKMLERSKVPINKIHIDD--KQLFSPLIK----- 447
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
+S + Q L +A + + ++V+ A KD + IF+ ++ L
Sbjct: 448 ----------------IQSFLAQSPELKETAKRAFVAYVKSVA-LMKD-KSIFDASKLDL 489
Query: 866 GHFAKSFALRDAPSV 880
+AKS L P V
Sbjct: 490 EAYAKSLGLLVTPRV 504
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ SI P L G D+L ++TGSGKTLA+ IP+ +KL + ++ DG+ A+II PT
Sbjct: 86 TAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVFEKL--YTNQWTKLDGLGALIITPT 143
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELALQ E K+ K + + GG+ +K+EK R+ + ++I++ TPGRLL H
Sbjct: 144 RELALQIFETVAKIGKLHDFTT-GLIIGGQNLKAEKNRLHQ-LNIIICTPGRLLQHMDQN 201
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ ++ LVLDEADR LD G+E + +E L ++ Q++L SAT T
Sbjct: 202 PLFDCTNLKILVLDEADRCLDLGFESAMNAIIENLPSER---QTLLFSATQT 250
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADR LD G+E + +E L ++ Q++L SAT T +V+ LA + L+NP I
Sbjct: 212 LVLDEADRCLDLGFESAMNAIIENLPSER---QTLLFSATQTKSVKDLARLNLRNPQYIA 268
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ + P L+Q+++ +L L SF+ + K++VF A
Sbjct: 269 PHEK-------EQYTTPTRLQQNYVAVELGQKLTMLWSFLKAHSK-------QKIIVFFA 314
Query: 318 TQDMADYHTELL 329
T Y E+
Sbjct: 315 TCKQVKYFYEVF 326
>gi|37589691|gb|AAH59534.1| Ddx55 protein, partial [Danio rerio]
Length = 493
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 253/490 (51%), Gaps = 49/490 (10%)
Query: 398 IHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
+H + + L E + T +T VQ I + DV + TGSGKTLA+ IP ++ L +
Sbjct: 16 LHDNILQTLKE-LGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKR 74
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-K 516
K+ +K + A+II PTRELA+Q E+ + + F L GG + +++ +
Sbjct: 75 EEKL-KKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQ 133
Query: 517 GISILVATPGRLLDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
G +I++ATPGRL D + ++ LVLDEADR+LD G+E + L L
Sbjct: 134 GANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLP 193
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
KQ+ ++ L SAT T +++L L+NP++I + ++ P L ++ +
Sbjct: 194 KQR---RTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQK--TPAKLSNYYTM 248
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
+ + L +F+ + + K LVF +T +Y + L VL +N++ +H
Sbjct: 249 CRAEEKFNTLVAFL-------RQHKHEKQLVFFSTCACVEYFGKALE-VLVKNVSIHCIH 300
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M + +R ++F FR++KSG+L+CTDV ARG+D+P V+W++QY PSS++ +VHR GRT
Sbjct: 301 GKM-KHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRT 359
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD-LSRLADGN 810
AR+G++G++L+FL+P E V L I K LQ+ SVK D L +L
Sbjct: 360 ARIGNQGNALVFLLPMEESYVNFL--------SINQKCPLQSFSSVKDVVDVLPKL---- 407
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
+S L + + + + S+V+ YA + L IF K + A+
Sbjct: 408 ------------KSMALGDRAMFEKGMRAFVSYVQAYAKHECSL--IFRIKDLDFAALAR 453
Query: 871 SFALRDAPSV 880
FAL P +
Sbjct: 454 GFALLRLPKM 463
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 10/184 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ I + DV + TGSGKTLA+ IP ++ L + K+ +K + A
Sbjct: 27 LGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
+II PTRELA+Q E+ + + F L GG + +++ +G +I++ATPGRL
Sbjct: 86 LIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGRL 145
Query: 120 LDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
D + ++ LVLDEADR+LD G+E + L L KQ+ ++ L S
Sbjct: 146 EDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQR---RTGLFS 202
Query: 175 ATLT 178
AT T
Sbjct: 203 ATQT 206
>gi|356540003|ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 1
[Glycine max]
Length = 589
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 243/480 (50%), Gaps = 57/480 (11%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVII 472
T VQ +I + DV V + TGSGKTLA+ IP+++ L+ PK + + +II
Sbjct: 38 CTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVIPLVEILRRSSSHPKPHK---VLGIII 94
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDH 531
PTREL+ Q + + + L GG ++K++ +I + G +IL+ TPGRL D
Sbjct: 95 SPTRELSTQIYHVAQSFISTLMNVKSMLLVGGAEVKTDIKKIEEEGANILIGTPGRLYDI 154
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQ 591
+ L +E L+LDEADR+LD G+++ I + +L K + ++ L SAT T A++
Sbjct: 155 MNRMDVLDLKNLEILILDEADRLLDMGFQKQITSIISLLPKLR---RTGLFSATQTEAIE 211
Query: 592 RLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
LA L+NP++++ T S P+S K TP L + L +C+
Sbjct: 212 ELAKAGLRNPVRVEVRAETKSEKGPASSKQPESSK-----TPSGLHIEYL------ECEE 260
Query: 652 ----------VNEDEESKMLVFMATQDMADYHTELLSTV-LGENIAFFKLHGSMSQSERT 700
+ ++ K++++ T DY +L + + + + LHG M QS R
Sbjct: 261 DKKPSQLLDILIKNRSKKIIIYFMTCACVDYWGAVLPCLSVLKGFSLIPLHGKMKQSARE 320
Query: 701 EVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSS 760
+ +F ++ +G+L+CTDVAARGLD+P VD IVQY P ++HRVGRTAR+G +G +
Sbjct: 321 KALASFTTLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFIHRVGRTARLGKQGHA 380
Query: 761 LLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
++FL+P E VE L+ RR+ ++E R+ + AT +
Sbjct: 381 VVFLLPKEESYVEFLRIRRVPLQE--------------------RICSDD----ATDVVP 416
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
SA + + + K + S++R Y + +IF +K++ +G A F L PS+
Sbjct: 417 QIRSAAKKDRDVMEKGIKAFVSYIRAYKEHH--CSYIFRWKELEIGKLATGFGLLQLPSM 474
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVII 63
T VQ +I + DV V + TGSGKTLA+ IP+++ L+ PK + + +II
Sbjct: 38 CTPVQAATIPLLCSFKDVAVDAATGSGKTLAFVIPLVEILRRSSSHPKPHK---VLGIII 94
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDH 122
PTREL+ Q + + + L GG ++K++ +I + G +IL+ TPGRL D
Sbjct: 95 SPTRELSTQIYHVAQSFISTLMNVKSMLLVGGAEVKTDIKKIEEEGANILIGTPGRLYDI 154
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ L +E L+LDEADR+LD G+++ I + +L K + ++ L SAT T A
Sbjct: 155 MNRMDVLDLKNLEILILDEADRLLDMGFQKQITSIISLLPKLR---RTGLFSATQTEA 209
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 155 AEFLEILKKQKPQFQSILLSATLTPATCW--CKHTETLKFSKVEHLVLDEADRILDQGYE 212
AE +KK + + +IL+ TP + + L +E L+LDEADR+LD G++
Sbjct: 127 AEVKTDIKKIEEEGANILIG---TPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQ 183
Query: 213 RDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLV 272
+ I + +L K + ++ L SAT T A++ LA L+NP++++ T S
Sbjct: 184 KQITSIISLLPKLR---RTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSK 240
Query: 273 IPDSLK 278
P+S K
Sbjct: 241 QPESSK 246
>gi|429857653|gb|ELA32507.1| ATP-dependent RNA helicase has1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1034
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 275/546 (50%), Gaps = 88/546 (16%)
Query: 381 PVSEALFAPTSYEEFPGIHPFMKKNLNEG-------MNITQVTTVQQLSIQPILDGGDVL 433
P ++AL P E H F + NL++ M T++T +Q+ I P+L G DVL
Sbjct: 566 PNADALTLPQVGAE---AHDFAELNLSDKTMKAIGEMGFTKMTEIQRRGIPPLLSGKDVL 622
Query: 434 VRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLC--K 491
++TGSGKTLA+ IP ++ L +R K ++G +++ PTRELALQ + +L
Sbjct: 623 GAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVARELMAHH 680
Query: 492 SFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEA 551
S T+ + KG+++L+ATPGRLLDH ++T + F ++ L++DEA
Sbjct: 681 SQTYGI------------------KGVNLLIATPGRLLDHLQNTPFV-FKNLKSLIIDEA 721
Query: 552 DRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADST 610
DRIL+ G+E ++ + ++IL K Q++L SAT T V+ LA ++L+ P+ ++ D
Sbjct: 722 DRILEIGFEDEMRQIVKILPKD--DRQTMLFSATQTTKVEDLARISLRPGPLYVN-VDEK 778
Query: 611 DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMA 670
H+T +L+Q +++ R + L SF+ + + K++VF ++ +
Sbjct: 779 QEHSTV------ANLEQGYVICDADKRFLLLFSFL-------KRNLKKKVIVFFSSCNSV 825
Query: 671 DYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVD 730
YH ELL+ + ++ LHG Q +RT F F + K G LICTDVAARGL
Sbjct: 826 KYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL------ 876
Query: 731 WIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKD 789
P DY+HRVGRTAR +G SL+FL PSEV + L+ R+ +
Sbjct: 877 ---DVDPPDDPRDYIHRVGRTARGANSKGRSLMFLQPSEVGFLTHLKEARVPV------- 926
Query: 790 CLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYAS 849
V+ + +++A+ +Q E + Q L+ SA GY S++ YAS
Sbjct: 927 -------VEFDFPANKIAN---------IQSLLEKLITQNYYLNKSAKDGYRSYLHAYAS 970
Query: 850 YSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQR 909
+S LR +F+ ++ L AKSF P V +G E+ + A +
Sbjct: 971 HS--LRTVFDVNKLDLAKVAKSFGFAVPPRVDVTVGASGRGEKKVQGRRAYGSQPKQGSG 1028
Query: 910 GNFSKK 915
G + K+
Sbjct: 1029 GYYKKR 1034
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 109/180 (60%), Gaps = 25/180 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 599 MGFTKMTEIQRRGIPPLLSGKDVLGAAKTGSGKTLAFLIPAVEMLSALRFKP--RNGTGV 656
Query: 61 VIILPTRELALQTLEIFTKLC--KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+++ PTRELALQ + +L S T+ + KG+++L+ATPGR
Sbjct: 657 IVVSPTRELALQIFGVARELMAHHSQTYGI------------------KGVNLLIATPGR 698
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T
Sbjct: 699 LLDHLQNTPFV-FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKD--DRQTMLFSATQT 755
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 17/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
F ++ L++DEADRIL+ G+E ++ + ++IL K Q++L SAT T V+ LA ++L+
Sbjct: 710 FKNLKSLIIDEADRILEIGFEDEMRQIVKILPKD--DRQTMLFSATQTTKVEDLARISLR 767
Query: 252 -NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
P+ ++ D H+T +L+Q +++ R + L SF+ + +
Sbjct: 768 PGPLYVN-VDEKQEHSTV------ANLEQGYVICDADKRFLLLFSFL-------KRNLKK 813
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ + YH ELL+
Sbjct: 814 KVIVFFSSCNSVKYHAELLN 833
>gi|47228482|emb|CAG05302.1| unnamed protein product [Tetraodon nigroviridis]
Length = 599
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 279/551 (50%), Gaps = 84/551 (15%)
Query: 406 LNEG-------MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
LN+G + + +T VQ I + DV + TGSGKTLA+ IPII+ L +
Sbjct: 16 LNDGILETLGELKFSHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKRE 75
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KG 517
K+ +K + A++I PTRELALQ ++ + + F L GG + + + +G
Sbjct: 76 EKL-KKMQVGALVITPTRELALQISQVMEQFLQRFPQFTQILLIGGSNPIEDVEKFKDQG 134
Query: 518 ISILVATPGRLLDHCKH-TETLKFS----KVEHLVLDEADRILDQGYERDIAEFLEILKK 572
+I++ATPGRL D K + L + +E LVLDEADR+LD G+E + L L K
Sbjct: 135 ANIVIATPGRLEDMFKRKADGLDLACWVKSLEVLVLDEADRLLDMGFEASLNAILGHLPK 194
Query: 573 QKPQFQSILLSATLTPAVQRLAGMTLQNPIQI----DAADSTDIHNTTDSLVIPDSLKQH 628
Q+ ++ L SAT T +++L L+NP++I A ++ + T P L +
Sbjct: 195 QR---RTGLFSATQTQELEKLVRAGLRNPVRITVKEKGAAASAVQKT------PSRLSNY 245
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE-NIAF 687
+ + + + L +F+ + + K LVF +T +Y L T++ + N+
Sbjct: 246 YTICRSEDKFNHLVAFL-------RQHKHEKNLVFFSTCACVEYFGRALETLIKKANVCC 298
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
+HG M + +R ++F FRS+KSG+L+CTDV ARG+D+P V+W++QY PSS++ +VHR
Sbjct: 299 --IHGKM-KDKRNKIFAEFRSLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHR 355
Query: 748 VGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
GRTAR+G++G++L+FL+P E V L I K LQ +L +K D+
Sbjct: 356 CGRTARIGNQGNALVFLLPMEESYVNFL--------SINQKCPLQKMLPIK---DV---- 400
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
V+ MS L + + + + + S+V+ YA + L IF + + G
Sbjct: 401 ---VDVLPRVKAMS-----LADRAVFDRSMRAFVSYVQAYAKHECSL--IFRVRDLDFGS 450
Query: 868 FAKSFALRDAPSV-------ISGIG-----------KPKNKEELKNKKMAINKEKSFKQR 909
A+ FAL P + ISG K KN+E+ + K +A E K +
Sbjct: 451 LARGFALLRLPKMPELKGKTISGFTETTEDTETIRYKDKNREKQRQKMLA---ELKAKDK 507
Query: 910 GNFSKKQMLSE 920
FS+ ++ E
Sbjct: 508 SPFSRSKVRPE 518
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 146/336 (43%), Gaps = 78/336 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ + +T VQ I + DV + TGSGKTLA+ IPII+ L + K+ +K + A
Sbjct: 27 LKFSHMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPIIELLLKREEKL-KKMQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR-KGISILVATPGRL 119
++I PTRELALQ ++ + + F L GG + + + +G +I++ATPGRL
Sbjct: 86 LVITPTRELALQISQVMEQFLQRFPQFTQILLIGGSNPIEDVEKFKDQGANIVIATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D K +AD + D+A
Sbjct: 146 EDMFKR---------------KADGL-------DLA------------------------ 159
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
CW K E L VLDEADR+LD G+E + L L KQ+ ++ L SAT T
Sbjct: 160 --CWVKSLEVL--------VLDEADRLLDMGFEASLNAILGHLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQI----DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
+++L L+NP++I A ++ + T P L ++ + + + L +
Sbjct: 207 QELEKLVRAGLRNPVRITVKEKGAAASAVQKT------PSRLSNYYTICRSEDKFNHLVA 260
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLST 331
F+ + + K LVF +T +Y L T
Sbjct: 261 FL-------RQHKHEKNLVFFSTCACVEYFGRALET 289
>gi|384245469|gb|EIE18963.1| DEAD-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 448
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 239/443 (53%), Gaps = 33/443 (7%)
Query: 391 SYEEFPGIHPFMKKNLNEGMN---ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
++E+ P + + EG+ T++T +Q+ ++ L G DVL ++TGSGKTLA+
Sbjct: 1 NFEDLP-----LSRCTKEGLKSAKYTRMTAIQRAALPHTLTGKDVLGAAKTGSGKTLAFV 55
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
IP+++KL R K + DG+ A+II PTRELA+Q E K+ + L GG+ +
Sbjct: 56 IPLVEKL--YRLKWGQPDGLGALIISPTRELAMQIFEELRKVGAKHD-LSAGLLIGGKNV 112
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
K E+ R+ ++ILVATPGRLL H T S ++ LVLDEADRILD G+ + +
Sbjct: 113 KEERDRV-NSMNILVATPGRLLQHMDETPGFDASSLQVLVLDEADRILDMGFSGTVNAII 171
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ 627
E L PQ Q++L SAT T +V+ LA ++L++P I A + + T P L+Q
Sbjct: 172 ENLP---PQRQTMLFSATQTRSVKDLARLSLRDPTYI-AIHAEAVAPT------PLKLQQ 221
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
++++ ++ L +FI +K+LVF++T Y E+L L +
Sbjct: 222 AYVISELPNKMSILWAFI-------KSHLRAKVLVFLSTCKQVKYTYEVLRR-LRPGVPL 273
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSG-VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
+HG M Q +R F F K G VL TD+AARGLD P VDW++Q P Y+H
Sbjct: 274 RCIHGKMKQMKRMAAFLEFSEAKGGAVLFATDIAARGLDFPSVDWVLQMDCPEDVACYIH 333
Query: 747 RVGRTARVGHEGSSLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
RVGRTAR G SLL ++PSE + ++ +L+ +I I+ +K+ + ++ LS+
Sbjct: 334 RVGRTARYVSGGRSLLMVLPSEKEAMLRQLEQAKIPIKPLKINPNKTQPIGPALQAMLSK 393
Query: 806 LADGNVETAATALQMSFESAVLQ 828
D E A AL S LQ
Sbjct: 394 STDLK-ELAQRALVSYMRSVFLQ 415
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T++T +Q+ ++ L G DVL ++TGSGKTLA+ IP+++KL R K + DG+ A+II
Sbjct: 21 TRMTAIQRAALPHTLTGKDVLGAAKTGSGKTLAFVIPLVEKL--YRLKWGQPDGLGALII 78
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA+Q E K+ + L GG+ +K E+ R+ ++ILVATPGRLL H
Sbjct: 79 SPTRELAMQIFEELRKVGAKHD-LSAGLLIGGKNVKEERDRV-NSMNILVATPGRLLQHM 136
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEADRILD G+ + +E L PQ Q++L SAT T
Sbjct: 137 DETPGFDASSLQVLVLDEADRILDMGFSGTVNAIIENL---PPQRQTMLFSATQT 188
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S ++ LVLDEADRILD G+ + +E L PQ Q++L S
Sbjct: 128 TPGRLLQHMDETPGFDASSLQVLVLDEADRILDMGFSGTVNAIIENL---PPQRQTMLFS 184
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P I A + + T P L+Q ++++ ++ L +
Sbjct: 185 ATQTRSVKDLARLSLRDPTYI-AIHAEAVAPT------PLKLQQAYVISELPNKMSILWA 237
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
FI +K+LVF++T Y E+L
Sbjct: 238 FI-------KSHLRAKVLVFLSTCKQVKYTYEVL 264
>gi|410079745|ref|XP_003957453.1| hypothetical protein KAFR_0E01640 [Kazachstania africana CBS 2517]
gi|372464039|emb|CCF58318.1| hypothetical protein KAFR_0E01640 [Kazachstania africana CBS 2517]
Length = 760
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 253/502 (50%), Gaps = 60/502 (11%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K LNE I Q+T +Q+ SI L G DVL ++TGSGKTLA+ IP+++KL R K +
Sbjct: 54 KGLNESAFI-QLTGIQRDSIPVSLKGHDVLGAARTGSGKTLAFLIPVLEKL--YREKWTA 110
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+II PTRELA+Q E+ K+ + T + GG+ +K E RI K I+IL+
Sbjct: 111 FDGLGALIISPTRELAMQIYEVLIKIGR-HTSFSAGLVIGGKDVKFESERISK-INILIG 168
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+L H L S ++ LVLDEADR LD G+++ + + L + Q++L S
Sbjct: 169 TPGRVLQHLDQAVGLSTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPASR---QTLLFS 225
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQ-HFIVTPPKLRLVALA 642
AT + ++ LA ++L + + + D N +S P++L+Q H IV P +L L
Sbjct: 226 ATQSNSLADLARLSLTDYKSVGTLEMAD-DNQANSSATPETLQQSHIIVALPD-KLDILF 283
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
SFI + +K++VF+++ + E + I+ LHG Q RTE
Sbjct: 284 SFIKTHLK-------AKLIVFLSSSKQVHFVYETFRK-MQPGISLMHLHGRQKQKARTET 335
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F + L TDV ARG+D P V+W++Q P Y+HRVGRT R G +G SL+
Sbjct: 336 LDKFNRAQHVCLFATDVVARGIDFPAVNWVIQVDCPEDVDTYIHRVGRTGRYGKKGKSLI 395
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVE--------TA 814
L P E EG L+RL N+E +
Sbjct: 396 MLTPQE------------------------------QEGFLNRLKSRNIEPEKLTIKQSK 425
Query: 815 ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
+++ +S + + L A K + S+VR + Y + + +F+F+++ FA+S L
Sbjct: 426 KKSIKPQLQSLLFKDPELKYLAQKAFISYVR--SIYIQKDKEVFHFEELPTEDFARSLGL 483
Query: 875 RDAPSV-ISGIGKPKNKEELKN 895
AP + I G+ + + +KN
Sbjct: 484 PGAPKIKIKGMKAIERAKTIKN 505
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q+T +Q+ SI L G DVL ++TGSGKTLA+ IP+++KL R K + DG+ A+II
Sbjct: 63 QLTGIQRDSIPVSLKGHDVLGAARTGSGKTLAFLIPVLEKL--YREKWTAFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ + T + GG+ +K E RI K I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLIKIGR-HTSFSAGLVIGGKDVKFESERISK-INILIGTPGRVLQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L + Q++L SAT
Sbjct: 179 QAVGLSTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPASR---QTLLFSAT 227
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L + Q++L SAT + ++ LA ++
Sbjct: 183 LSTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPASR---QTLLFSATQSNSLADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQ-HFIVTPPKLRLVALASFILGKCQNVNEDE 308
L + + + D N +S P++L+Q H IV P +L L SFI +
Sbjct: 240 LTDYKSVGTLEMAD-DNQANSSATPETLQQSHIIVALPD-KLDILFSFIKTHLK------ 291
Query: 309 ESKMLVFMAT 318
+K++VF+++
Sbjct: 292 -AKLIVFLSS 300
>gi|403331185|gb|EJY64526.1| putative ATP-dependent RNA helicase DDX10 [Oxytricha trifallax]
Length = 961
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 251/490 (51%), Gaps = 68/490 (13%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T VQ+ +I + G DV+V ++TGSGKTL+Y +PI+++L R S DG+ A+I++
Sbjct: 130 KMTEVQRAAISHAIAGRDVVVSARTGSGKTLSYLVPIVERLYHER--WSSMDGLGALILV 187
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
P RELALQ E+ +F + GG+ + E+ RIR G++IL+ TPGRLL H
Sbjct: 188 PVRELALQAFEVLRSFG-AFHDLSAGLAIGGKDLNYEQERIR-GMNILICTPGRLLQHMN 245
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
+E L S ++ LV+DE DRILD G++ + + + L K+ Q++L SAT+ ++ +
Sbjct: 246 ESEGLDTSNLKMLVIDEVDRILDMGFKDTMEQIMRNLPKKT---QTMLFSATVGKILKDM 302
Query: 594 AGMTLQ-----------NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL------ 636
A + L+ + I+ A D + D +++ D LK +TP KL
Sbjct: 303 ARVNLKPDHEYICIHDYDSIESLANDYNPNASAEDKMIV-DQLKS---ITPVKLLHFYMV 358
Query: 637 -----RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV-LGENIAFFKL 690
+L L SF+ +N K +VF + + E + LG + +L
Sbjct: 359 INIEDKLDTLFSFLKSHQKN-------KCIVFFSACKQVRFAYEAFKRLKLG--MIMLEL 409
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG Q++RT ++ F K VL CTDVA+RG+D P VDW+VQY P Y+HRVGR
Sbjct: 410 HGRQKQTKRTAIYYEFVERKQAVLFCTDVASRGIDFPAVDWVVQYDCPEDLQTYIHRVGR 469
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
TAR +G++LLF P+E K ++++Q R I+++++ + N
Sbjct: 470 TARYKSKGNALLFSTPAETKFIDKIQQRGIQLKKL----------------------NAN 507
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
A T +Q + + + + + A K S+++ + Y + F F ++ A
Sbjct: 508 PNQALT-IQPTLQKLNAENRDVKHLAEKACISYIK--SIYLMKDKETFKFNELDCEKLAY 564
Query: 871 SFALRDAPSV 880
S L +AP +
Sbjct: 565 SLGLANAPQI 574
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 109/173 (63%), Gaps = 7/173 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T VQ+ +I + G DV+V ++TGSGKTL+Y +PI+++L R S DG+ A+I++
Sbjct: 130 KMTEVQRAAISHAIAGRDVVVSARTGSGKTLSYLVPIVERLYHER--WSSMDGLGALILV 187
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
P RELALQ E+ +F + GG+ + E+ RIR G++IL+ TPGRLL H
Sbjct: 188 PVRELALQAFEVLRSFG-AFHDLSAGLAIGGKDLNYEQERIR-GMNILICTPGRLLQHMN 245
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
+E L S ++ LV+DE DRILD G++ + + + L K+ Q++L SAT+
Sbjct: 246 ESEGLDTSNLKMLVIDEVDRILDMGFKDTMEQIMRNLPKKT---QTMLFSATV 295
>gi|196006399|ref|XP_002113066.1| hypothetical protein TRIADDRAFT_26030 [Trichoplax adhaerens]
gi|190585107|gb|EDV25176.1| hypothetical protein TRIADDRAFT_26030, partial [Trichoplax
adhaerens]
Length = 491
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 243/466 (52%), Gaps = 48/466 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 475
T +Q+ SI L G DVL ++TGSGKTLA+ IPI++ L + K S DGI A+II PT
Sbjct: 31 TKIQKESIPIALSGRDVLGAAKTGSGKTLAFIIPILELLWQQ--KWSSMDGIGAIIISPT 88
Query: 476 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 535
RELA QT E+ K+ K + + GG+ M+ E+ I +I+V+TPGRLL H T
Sbjct: 89 RELAYQTFEVLRKIGKKHD-MSAGLVIGGKSMEEEQRSI-IATNIIVSTPGRLLQHMDET 146
Query: 536 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAG 595
+ ++ LVLDEADRILD G+ + LE + ++ Q++L SAT T +V+ LA
Sbjct: 147 PNFDCNNLQLLVLDEADRILDMGFADTMNAILENIPDER---QTLLFSATQTKSVKDLAR 203
Query: 596 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 655
++L P + + N+T S P LKQ ++V + ++ L SFI +
Sbjct: 204 LSLNEPAYVSVHE-----NSTSS--TPSRLKQSYMVCELQDKMNLLFSFIRNHIK----- 251
Query: 656 EESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLI 715
SK+L+FM++ + E L I L+G Q +R ++ F VL
Sbjct: 252 --SKILIFMSSCKQVKFVYEAFRR-LRPGIPLLALYGKQKQLKRMAIYNEFCRRSEAVLF 308
Query: 716 CTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LVEE 774
TD+AARGLD P VDW+VQ P + Y+HR GRTAR +G +LL L+PSE + ++EE
Sbjct: 309 ATDIAARGLDFPAVDWVVQLDCPEDANTYIHRAGRTARYQKDGQALLVLLPSEEEGMLEE 368
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ +++ + I++ L+S+ + + + D ++ A +S+ +V Q
Sbjct: 369 LKKKKLNLTSIRVNP--SKLMSIGKKLEALCVKDVEIKHWAQKCCISYARSVFLQG---- 422
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+KD +F+ ++ + FA+S L + P +
Sbjct: 423 ----------------NKD---VFDVHKLPMEEFARSLGLMNPPRI 449
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T +Q+ SI L G DVL ++TGSGKTLA+ IPI++ L + K S DGI A+II PT
Sbjct: 31 TKIQKESIPIALSGRDVLGAAKTGSGKTLAFIIPILELLWQQ--KWSSMDGIGAIIISPT 88
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHT 126
RELA QT E+ K+ K + + GG+ M+ E+ I +I+V+TPGRLL H T
Sbjct: 89 RELAYQTFEVLRKIGKKHD-MSAGLVIGGKSMEEEQRSI-IATNIIVSTPGRLLQHMDET 146
Query: 127 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ ++ LVLDEADRILD G+ + LE + ++ Q++L SAT T
Sbjct: 147 PNFDCNNLQLLVLDEADRILDMGFADTMNAILENIPDER---QTLLFSATQT 195
>gi|358383244|gb|EHK20912.1| hypothetical protein TRIVIDRAFT_50536 [Trichoderma virens Gv29-8]
Length = 805
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 213/374 (56%), Gaps = 23/374 (6%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+ T +T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+
Sbjct: 71 HFTNMTEIQEQAIPLALQGKDILGAAKTGSGKTLAFLVPVLEKL--YREQWTEFDGLGAL 128
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
I+ PTRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L
Sbjct: 129 ILSPTRELAVQIFEVLRKIGRHHAFSA-GLVIGGKSLKEEAERLIR-MNILVCTPGRMLQ 186
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT + V
Sbjct: 187 HLDQTAGFDANNLQILVLDEADRIMDLGFQSAVDALVEHLPKSR---QTLMFSATQSKKV 243
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
LA ++L++P + +H + P +L+QH+IVTP +L L FI +
Sbjct: 244 SDLARLSLKDP------EYVSVHQDA-TTATPTTLQQHYIVTPLPEKLDTLYGFIKANVK 296
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
SK++VF+++ + E L I LHG Q R E+ F + K
Sbjct: 297 -------SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQKQVARLEITNRFTAAK 348
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+ L TDV ARG+D P VDW++Q P + Y+HRVGRTAR G ++LFL PSE +
Sbjct: 349 TSCLFATDVVARGIDFPAVDWVIQADCPEDADTYIHRVGRTARFQSNGRAVLFLDPSEEE 408
Query: 771 -LVEELQNRRIRIE 783
+++ L++++I I+
Sbjct: 409 GMIKRLEHKKIPIQ 422
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T +T +Q+ +I L G D+L ++TGSGKTLA+ +P+++KL R + + DG+ A+
Sbjct: 71 HFTNMTEIQEQAIPLALQGKDILGAAKTGSGKTLAFLVPVLEKL--YREQWTEFDGLGAL 128
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
I+ PTRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L
Sbjct: 129 ILSPTRELAVQIFEVLRKIGRHHAFSA-GLVIGGKSLKEEAERLIR-MNILVCTPGRMLQ 186
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
H T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT
Sbjct: 187 HLDQTAGFDANNLQILVLDEADRIMDLGFQSAVDALVEHLPKSR---QTLMFSAT 238
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + +E L K + Q+++ S
Sbjct: 180 TPGRMLQHLDQTAGFDANNLQILVLDEADRIMDLGFQSAVDALVEHLPKSR---QTLMFS 236
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L++P + +H + P +L+QH+IVTP +L L
Sbjct: 237 ATQSKKVSDLARLSLKDP------EYVSVHQDA-TTATPTTLQQHYIVTPLPEKLDTLYG 289
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 290 FIKANVK-------SKIIVFLSS 305
>gi|308160174|gb|EFO62674.1| ATP-dependent RNA helicase HAS1, putative [Giardia lamblia P15]
Length = 547
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 259/530 (48%), Gaps = 57/530 (10%)
Query: 372 PNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLN-------EGMNITQVTTVQQLSIQ 424
PN P +P Y+E PF + +L+ + M +T +Q+ SI
Sbjct: 6 PNAP----EPAGGGDAENAKYQEIMTETPFSETSLSPFLLEAVDAMGHKNMTRIQEASIP 61
Query: 425 PILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLE 484
IL G ++ ++ TGSGK+LA+ +P I + + K+ G+ +++ PTRELALQ
Sbjct: 62 VILSGRNMTAKAHTGSGKSLAFLLPAIDLIHKANMKLHHGTGV--IVLTPTRELALQLYN 119
Query: 485 IFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVE 544
+ T+L S T I GG + E + KG S+++ATPGRL DH +T K K+
Sbjct: 120 VATQLI-SATNITVGLAIGGTSRQKEANHLCKGASVVIATPGRLCDHLNNTPGFKTDKLF 178
Query: 545 HLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQI 604
L+LDEAD +L+ G+++++ L +L K + Q SAT++ + M + +
Sbjct: 179 MLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSDKCLEVPHMEVDKETLV 237
Query: 605 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
+TD+ ++ + +Q +I+ PP+ R + L +F+ + K++VF+
Sbjct: 238 RI--NTDVKSSAATRA---HFEQGYIICPPEQRFLLLYTFM-------KRRSDKKIIVFL 285
Query: 665 ATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
+++D +++ E L + +I L G M Q +R E + F + +SGVL+ T+VAARGL
Sbjct: 286 SSRDSVEFYYEFLRFIGMASI--LMLDGGMKQKQRMETYNKFCNAQSGVLLATNVAARGL 343
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTAR--VGHEGSSLLFLIPSEVKLVEELQNRRIRI 782
DLP +D+++Q+ P S Y+HR GR R +G LLFL+ E K + L+ + +
Sbjct: 344 DLPAIDYVIQFDPPESVESYIHRAGRACRGDTNKKGVGLLFLMSHETKFISFLKAHNVSL 403
Query: 783 EEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTS 842
E + AD + +Q E+ + L A Y S
Sbjct: 404 FEFEFP------------------ADKIIN-----VQAEMENLIATIYYLRRKAQNAYRS 440
Query: 843 WVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKE 891
++ YAS+ L+ +FN +I L +SF L + P V + GI KN E
Sbjct: 441 FISAYASHH--LKKVFNVNKIDLECLGRSFGLTEVPRVDVPGISLYKNME 488
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ SI IL G ++ ++ TGSGK+LA+ +P I + + K+ G+
Sbjct: 47 MGHKNMTRIQEASIPVILSGRNMTAKAHTGSGKSLAFLLPAIDLIHKANMKLHHGTGV-- 104
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + T+L S T I GG + E + KG S+++ATPGRL
Sbjct: 105 IVLTPTRELALQLYNVATQLI-SATNITVGLAIGGTSRQKEANHLCKGASVVIATPGRLC 163
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +T K K+ L+LDEAD +L+ G+++++ L +L K + Q SAT++
Sbjct: 164 DHLNNTPGFKTDKLFMLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSDK 222
Query: 181 TCWCKHTETLK 191
H E K
Sbjct: 223 CLEVPHMEVDK 233
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 184 CKH---TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
C H T K K+ L+LDEAD +L+ G+++++ L +L K + Q SAT++
Sbjct: 163 CDHLNNTPGFKTDKLFMLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSD 221
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ M + + +TD+ ++ + +Q +I+ PP+ R + L +F+
Sbjct: 222 KCLEVPHMEVDKETLVRI--NTDVKSSAATRA---HFEQGYIICPPEQRFLLLYTFM--- 273
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
+ K++VF++++D +++ E L
Sbjct: 274 ----KRRSDKKIIVFLSSRDSVEFYYEFL 298
>gi|345492365|ref|XP_001600475.2| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Nasonia
vitripennis]
Length = 825
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 241/466 (51%), Gaps = 47/466 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L + +R DG+ A+II P
Sbjct: 64 LTDIQRQSIGLALKGNDILGAAKTGSGKTLAFLIPVMEIL--YCKQWTRLDGLGALIITP 121
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA Q E K+ + + I + GG+ + EK R+ + +I++ TPGRLL H
Sbjct: 122 TRELAYQIYETLRKVGR-YHDISAGLIIGGKDLHFEKKRLDQ-CNIIICTPGRLLQHMDE 179
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
++ LVLDEADR LD G+E+ + +E L ++ Q++L SAT T V+ LA
Sbjct: 180 NPLFDCVNMKILVLDEADRCLDMGFEKTMNSIIENLPLER---QTLLFSATQTKTVKDLA 236
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P+ I ++ H T P+ L+Q +IV + +L L SFI +
Sbjct: 237 RLSLKDPLYISVHENA-AHTT------PEGLQQSYIVCELEEKLAMLWSFIRNHLK---- 285
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
K++VF ++ Y E + ++ L+G++ Q +R ++++F + VL
Sbjct: 286 ---QKIIVFFSSCKQVKYIFEAFCR-MRPGVSLLSLYGTLHQLKRMSIYESFCKKQHAVL 341
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
TD+AARGLD P V+W+VQ P Y+HR GRTAR G SLL L+PSE K+V +
Sbjct: 342 FATDIAARGLDFPAVNWVVQMDCPEDVNAYIHRAGRTARFQSGGESLLVLLPSEEKIVHQ 401
Query: 775 LQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHT 834
L+ R+I I IK+ + Q E+ + + L
Sbjct: 402 LKERKIPINMIKIN-----------------------PNKLQSPQRKLEALLARDVALKE 438
Query: 835 SACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
SA + + ++V+ + + + IFN ++ FA+S L P +
Sbjct: 439 SAQRAFVAYVK--SVFLMKDKSIFNVHALNTDAFARSLGLAIPPRI 482
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L + +R DG+ A+II P
Sbjct: 64 LTDIQRQSIGLALKGNDILGAAKTGSGKTLAFLIPVMEIL--YCKQWTRLDGLGALIITP 121
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q E K+ + + I + GG+ + EK R+ + +I++ TPGRLL H
Sbjct: 122 TRELAYQIYETLRKVGR-YHDISAGLIIGGKDLHFEKKRLDQ-CNIIICTPGRLLQHMDE 179
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ LVLDEADR LD G+E+ + +E L ++ Q++L SAT T
Sbjct: 180 NPLFDCVNMKILVLDEADRCLDMGFEKTMNSIIENLPLER---QTLLFSATQT 229
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 17/127 (13%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADR LD G+E+ + +E L ++ Q++L SAT T V+ LA ++L++P+ I
Sbjct: 191 LVLDEADRCLDMGFEKTMNSIIENLPLER---QTLLFSATQTKTVKDLARLSLKDPLYIS 247
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
++ H T P+ L+Q +IV + +L L SFI + K++VF +
Sbjct: 248 VHENA-AHTT------PEGLQQSYIVCELEEKLAMLWSFIRNHLK-------QKIIVFFS 293
Query: 318 TQDMADY 324
+ Y
Sbjct: 294 SCKQVKY 300
>gi|147899081|ref|NP_001086608.1| ATP-dependent RNA helicase DDX55 [Xenopus laevis]
gi|82199952|sp|Q6AZV7.1|DDX55_XENLA RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|50603912|gb|AAH77172.1| Ddx55-prov protein [Xenopus laevis]
Length = 594
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 274/539 (50%), Gaps = 67/539 (12%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + T +T VQ +I ++ D+ + TGSGKTLA+ IP+++ L + K+ +K+ +
Sbjct: 25 EELKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKL-KKNQV 83
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPG 526
A+II PTRELA+Q E+ + K F L GG + + ++ G +I+VATPG
Sbjct: 84 GALIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGGSNPVDDVRKFKEHGGNIIVATPG 143
Query: 527 RLLDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL 581
RL D + + ++ L+LDEADR+LD G+E I L L KQ+ ++ L
Sbjct: 144 RLEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINTILGFLPKQR---RTGL 200
Query: 582 LSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 641
SAT T ++ L L+NP++I + +T P L+ ++++ + L
Sbjct: 201 FSATQTQELENLVRAGLRNPVRIAVKEKGVAATSTQK--TPIRLQNYYMICKADEKFNKL 258
Query: 642 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTE 701
+F+ + ++ K LVF +T +Y+ + L +L + + +HG M + +R
Sbjct: 259 IAFL-------QKRKQEKHLVFFSTCACVEYYGKALEMLL-KPVKVMCIHGKM-KHKRNR 309
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSL 761
+F FR + SG+L+CTDV ARG+D+ V+W+VQY PSS++ +VHR GRTAR+GH GS+L
Sbjct: 310 IFTEFRKINSGILVCTDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRTARIGHHGSAL 369
Query: 762 LFLIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
+FL+P E V L N++ ++E+ + ++SV + L +A+ + +
Sbjct: 370 VFLLPMEESYVSFLSINQKCPLQEM-----TELIISVDLLPKLKAMAETD--------RA 416
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
FE + K + S+V+ YA + +L IF K + A+ F L P +
Sbjct: 417 VFEKGM-----------KAFVSYVQAYAKHECNL--IFRVKDLDFSSLARGFGLLRMPRM 463
Query: 881 ISGIG------------------KPKNKEELKNKKMAINKEK-SFKQRGNFSKKQMLSE 920
G K KN+E+ + K + KEK + R +F+K + S+
Sbjct: 464 PELKGKNFSDFVSTLIDTDSIAYKDKNREKQRQKMLKERKEKLETEGRKHFAKNKAWSK 522
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ T +T VQ +I ++ D+ + TGSGKTLA+ IP+++ L + K+ +K+ + A
Sbjct: 27 LKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKL-KKNQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ + K F L GG + + ++ G +I+VATPGRL
Sbjct: 86 LIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGGSNPVDDVRKFKEHGGNIIVATPGRL 145
Query: 120 LDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
D + + ++ L+LDEADR+LD G+E I L L KQ+ ++ L S
Sbjct: 146 EDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINTILGFLPKQR---RTGLFS 202
Query: 175 ATLT 178
AT T
Sbjct: 203 ATQT 206
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
L+LDEADR+LD G+E I L L KQ+ ++ L SAT T ++ L L+NP++I
Sbjct: 168 LILDEADRLLDMGFEASINTILGFLPKQR---RTGLFSATQTQELENLVRAGLRNPVRIA 224
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+ +T P L+ ++++ + L +F+ + ++ K LVF +
Sbjct: 225 VKEKGVAATSTQK--TPIRLQNYYMICKADEKFNKLIAFL-------QKRKQEKHLVFFS 275
Query: 318 TQDMADYHTELL 329
T +Y+ + L
Sbjct: 276 TCACVEYYGKAL 287
>gi|322708287|gb|EFY99864.1| ATP-dependent RNA helicase DBP4 [Metarhizium anisopliae ARSEF 23]
Length = 796
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 236/467 (50%), Gaps = 48/467 (10%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQQ +I L DVL ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 73 LTEVQQQAIPLALKDNDVLGAAKTGSGKTLAFLIPVLEKL--YRAQWTEFDGLGALIISP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAVQIFEVLRKIGR-YHVFSAGLVIGGKNLKEEAERLAR-MNILVCTPGRMLQHLDQ 188
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT + V LA
Sbjct: 189 TAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFSATQSKKVSDLA 245
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L+ P + +H S P +L+QH+I TP +L L F+ +
Sbjct: 246 RLSLKEP------EYVSVHEAATS-ATPTNLQQHYITTPLPEKLDTLYGFLKSNLK---- 294
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF+++ + E L I LHG Q R E+ F + K L
Sbjct: 295 ---SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQRQVARLEITSRFTAAKHSCL 350
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV-KLVE 773
TDV ARG+D P VDW++Q P Y+HRVGRTAR +G ++LFL PSE +V+
Sbjct: 351 FATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRTARYQSKGRAVLFLDPSEEPGMVK 410
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L+ ++I I+++ ++ E +++ ++ Q L
Sbjct: 411 RLEQKKIPIQKVNVR-----------------------EKKKKSIKNDLQNMCFQNPDLK 447
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
K + S+ R A + + + +F ++ L FA L P +
Sbjct: 448 YLGQKAFISYSR--AIHLQRDKEVFKLDKLDLDAFASGLGLPGTPQI 492
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQQ +I L DVL ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 73 LTEVQQQAIPLALKDNDVLGAAKTGSGKTLAFLIPVLEKL--YRAQWTEFDGLGALIISP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAVQIFEVLRKIGR-YHVFSAGLVIGGKNLKEEAERLAR-MNILVCTPGRMLQHLDQ 188
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT
Sbjct: 189 TAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFSAT 236
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + +E L K + Q+++ S
Sbjct: 178 TPGRMLQHLDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFS 234
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L+ P + +H S P +L+QH+I TP +L L
Sbjct: 235 ATQSKKVSDLARLSLKEP------EYVSVHEAATS-ATPTNLQQHYITTPLPEKLDTLYG 287
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
F+ + SK++VF+++
Sbjct: 288 FLKSNLK-------SKIIVFLSS 303
>gi|195132627|ref|XP_002010744.1| GI21709 [Drosophila mojavensis]
gi|193907532|gb|EDW06399.1| GI21709 [Drosophila mojavensis]
Length = 804
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 163/498 (32%), Positives = 249/498 (50%), Gaps = 52/498 (10%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
++ +FP + +K L+E T T VQ+LSI L G DVL + TGSGKTLA+ IP+
Sbjct: 68 TFAQFP-LSQKTQKALSEA-KYTTPTEVQRLSIGHALQGKDVLGAAITGSGKTLAFLIPV 125
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
++ L K SR DG+ A+II PTRELA Q E K+ K + + GG+ +K E
Sbjct: 126 LEHL--YMNKWSRTDGVGAIIISPTRELAYQIFETLKKIGKYHDFSA-GLIIGGKNLKFE 182
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+ R+ + +IL+ TPGRLL H + +E LVLDEADR LD G+++ + +E
Sbjct: 183 RTRMDQ-CNILICTPGRLLQHMDENPLFNATTMEVLVLDEADRCLDMGFQKTLNSIIENF 241
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQID--AADSTDIH--NTTDSLVIPDSLK 626
P Q++L SAT T V+ LA + L+NP+ + A S D +T L +P+ L+
Sbjct: 242 P---PDRQTLLFSATQTNTVEDLARLNLKNPVYVGYGTAKSVDTKPSGSTAVLALPELLQ 298
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q ++V P + ++ L SFI + K++VF+A+ A Y E+ L +
Sbjct: 299 QSYVVLPLEEKITMLWSFIKNHLKQ-------KIIVFVASCKQAKYLYEIFCK-LRPGVG 350
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
L+G++ Q R +++ F V+ TDVA+RGLD P V+W++Q P Y+H
Sbjct: 351 LLALYGTLHQDRRIAIYEDFLRKSHVVMFATDVASRGLDFPSVNWVLQLDCPEDVPQYIH 410
Query: 747 RVGRTARVGHEGSSLLFLIPSE----VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGD 802
R GR+AR G LL L PSE + ++E N IR I K VK+E
Sbjct: 411 RAGRSARNKSRGECLLVLTPSEEEYMIGALKEQLNLDIRAVHIDPKKLFSP--RVKIEAF 468
Query: 803 LSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
L++ + L SA + + S+++ + + + +FN
Sbjct: 469 LAQFPE-----------------------LRASAQRAFLSYLK--SVFLMRNKRLFNVLS 503
Query: 863 IHLGHFAKSFALRDAPSV 880
+ L +A+S L P V
Sbjct: 504 LDLDAYAQSLGLAVTPRV 521
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T T VQ+LSI L G DVL + TGSGKTLA+ IP+++ L K SR DG+ A+II
Sbjct: 88 TTPTEVQRLSIGHALQGKDVLGAAITGSGKTLAFLIPVLEHL--YMNKWSRTDGVGAIII 145
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTRELA Q E K+ K + + GG+ +K E+ R+ + +IL+ TPGRLL H
Sbjct: 146 SPTRELAYQIFETLKKIGKYHDFSA-GLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHM 203
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+ +E LVLDEADR LD G+++ + +E P Q++L SAT T
Sbjct: 204 DENPLFNATTMEVLVLDEADRCLDMGFQKTLNSIIENF---PPDRQTLLFSATQT 255
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
+E LVLDEADR LD G+++ + +E P Q++L SAT T V+ LA + L+NP+
Sbjct: 214 MEVLVLDEADRCLDMGFQKTLNSIIENF---PPDRQTLLFSATQTNTVEDLARLNLKNPV 270
Query: 255 QI--DAADSTDIH--NTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ A S D +T L +P+ L+Q ++V P + ++ L SFI +
Sbjct: 271 YVGYGTAKSVDTKPSGSTAVLALPELLQQSYVVLPLEEKITMLWSFIKNHLKQ------- 323
Query: 311 KMLVFMATQDMADYHTELL 329
K++VF+A+ A Y E+
Sbjct: 324 KIIVFVASCKQAKYLYEIF 342
>gi|110736442|dbj|BAF00189.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 520
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 246/494 (49%), Gaps = 45/494 (9%)
Query: 395 FPGIHPFMKKNLNEGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
F + P + ++ E +N + T VQ +I + DV V + TGSGKTLA+ +P++
Sbjct: 16 FSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L+ + + VII PTREL+ Q + + + L GG ++K++
Sbjct: 76 EILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADM 135
Query: 512 ARIRK-GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
I + G ++L+ TPGRL D + E L F +E L+LDEADR+L+ ++R + + L
Sbjct: 136 KIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMRFQRQVNYIISRL 195
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA---ADSTDIHNTTDSLVIPDSLKQ 627
KQ+ ++ L SAT T V+ LA L+NP++++ + S T+S P L
Sbjct: 196 PKQR---RTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKT-PSGLHL 251
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-ENIA 686
++ + L ++ ++ + K++VF T DY +LS + ++I+
Sbjct: 252 EYMECEADKKSSQLVDLLI-------KNSDKKLIVFFMTCASVDYWGLVLSKIPALKSIS 304
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
+HG M Q+ R + +F SG L+CTDVAARGLD+P +D++VQY P + H
Sbjct: 305 LIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNH 364
Query: 747 RVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRL 806
R GRTAR+G +G +++FL+P E VE ++ RR+ +EE K + +++ +
Sbjct: 365 RAGRTARLGRQGRAIVFLLPKEEAYVEFMRIRRVPLEERKCSEDASDVIPI--------- 415
Query: 807 ADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
SA ++ + + K + S+VR Y + IF +K + +G
Sbjct: 416 ---------------IRSAAMKDRAVMEKGLKAFVSFVRAYKEHHCSF--IFRWKDLEIG 458
Query: 867 HFAKSFALRDAPSV 880
A + L PS+
Sbjct: 459 KLAMGYGLLYLPSM 472
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ + + VII PT
Sbjct: 40 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPT 99
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH 125
REL+ Q + + + L GG ++K++ I + G ++L+ TPGRL D +
Sbjct: 100 RELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMER 159
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E L F +E L+LDEADR+L+ ++R + + L KQ+ ++ L SAT T
Sbjct: 160 MEILDFRNLEILILDEADRLLEMRFQRQVNYIISRLPKQR---RTGLFSATQT 209
>gi|348530130|ref|XP_003452564.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Oreochromis
niloticus]
Length = 922
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 247/469 (52%), Gaps = 50/469 (10%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L R + S DG+ A+II
Sbjct: 162 QPTEIQRQTIGFALQGKDVLGAAKTGSGKTLAFLIPVLECL--YRHQWSSMDGLGALIIS 219
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA QT E+ K+ ++ + + GG+ MKSE RI + +I++ TPGRLL H
Sbjct: 220 PTRELAYQTFEVLRKVGRNHEFSA-GLIIGGKDMKSECERIHR-TNIVICTPGRLLQHMD 277
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
T T S + LVLDEADRILD G+ + +E L K + Q++L SAT T +V+ L
Sbjct: 278 ETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR---QTLLFSATQTKSVKDL 334
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
A ++L++P + +H P +L+Q++IV ++ L SFI +
Sbjct: 335 ARLSLKDP------EYVWVHEKA-KFSTPATLEQNYIVCELHQKVNMLYSFIRSHLKK-- 385
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
K++VF A Y L + LHG Q +R EV+ F ++ V
Sbjct: 386 -----KIIVFFACCKEVQYLFRAFCR-LRPGMPILALHGKQQQMKRVEVYNDFLRKQNAV 439
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LV 772
L TD+AARGLD P V W++Q+ P + Y+HRVGRTAR G +LL L+PSE K +V
Sbjct: 440 LFATDIAARGLDFPAVHWVLQFDCPEDADTYIHRVGRTARYKEGGEALLLLLPSEEKGMV 499
Query: 773 EELQNRRIRIEEIKLK-DCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKI 831
++L+ +++ I +I++ D LQ ++Q ++ + Q+K
Sbjct: 500 KQLEEKKVPINKIQVNPDKLQ------------------------SVQQKLQAFLAQEKE 535
Query: 832 LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A + + S++R + Y + +F+ +I L +A S L AP V
Sbjct: 536 QKERAQRCFVSYLR--SVYLMKNKEVFDAFKIKLPEYALSLGLAVAPRV 582
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L R + S DG+ A+II
Sbjct: 162 QPTEIQRQTIGFALQGKDVLGAAKTGSGKTLAFLIPVLECL--YRHQWSSMDGLGALIIS 219
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA QT E+ K+ ++ + + GG+ MKSE RI + +I++ TPGRLL H
Sbjct: 220 PTRELAYQTFEVLRKVGRNHEFSA-GLIIGGKDMKSECERIHR-TNIVICTPGRLLQHMD 277
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T T S + LVLDEADRILD G+ + +E L K + Q++L SAT T
Sbjct: 278 ETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR---QTLLFSATQT 328
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T T S + LVLDEADRILD G+ + +E L K + Q++L SAT T +V+ LA
Sbjct: 279 TATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR---QTLLFSATQTKSVKDLA 335
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 306
++L++P + +H P +L+Q++IV ++ L SFI +
Sbjct: 336 RLSLKDP------EYVWVHEKA-KFSTPATLEQNYIVCELHQKVNMLYSFIRSHLKK--- 385
Query: 307 DEESKMLVFMATQDMADY 324
K++VF A Y
Sbjct: 386 ----KIIVFFACCKEVQY 399
>gi|323354469|gb|EGA86308.1| Hca4p [Saccharomyces cerevisiae VL3]
Length = 770
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 251/507 (49%), Gaps = 47/507 (9%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+++ P P +K L E I ++T +Q SI L G DVL ++TGSGKTLA+ +P+I
Sbjct: 43 FKDLPISDPTLK-GLRESSFI-KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVI 100
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+KL R K + DG+ A+II PTRELA+Q E+ TK+ S T + GG+ +K E
Sbjct: 101 EKL--YREKWTEFDGLGALIISPTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFEL 157
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
RI + I+IL+ TPGR+L H L S ++ LVLDEADR LD G+++ + + L
Sbjct: 158 ERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLS 216
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
P Q++L SAT + +V LA ++L + + D D + P++L+Q +I
Sbjct: 217 ---PSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIE 272
Query: 632 TPPKLRLVALASFILG--KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFK 689
P +L L SFI KC KM+VF+++ + E + I+
Sbjct: 273 VPLADKLDILFSFIKSHLKC---------KMIVFLSSSKQVHFVYETFRK-MQPGISLMH 322
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG Q RTE F + L TDV ARG+D P VDW+VQ P Y+HRVG
Sbjct: 323 LHGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVG 382
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
R AR G +G SL+ L P E + + N R +IE KL
Sbjct: 383 RCARYGKKGKSLIMLTPQEQEAFLKRLNAR-KIEPGKL---------------------N 420
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
++ +++ +S + + L K + S+VR + Y + + +F F ++ FA
Sbjct: 421 IKQSKKKSIKPQLQSLLFKDPELKYLGQKAFISYVR--SIYVQKDKQVFKFDELPTEEFA 478
Query: 870 KSFALRDAPSV-ISGIGKPKNKEELKN 895
S L P + + G+ + +E KN
Sbjct: 479 YSLGLPGPPKIKMKGMKTIEQAKERKN 505
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q SI L G DVL ++TGSGKTLA+ +P+I+KL R K + DG+ A+II
Sbjct: 63 KLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ TK+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLTKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSAT 227
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + +V LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTL---SPSRQTLLFSATQSQSVADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG--KCQNVNED 307
L + + D D + P++L+Q +I P +L L SFI KC
Sbjct: 240 LTDYKTVGTHDVMD-GSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKC------ 292
Query: 308 EESKMLVFMAT 318
KM+VF+++
Sbjct: 293 ---KMIVFLSS 300
>gi|322700332|gb|EFY92088.1| ATP-dependent RNA helicase DBP4 [Metarhizium acridum CQMa 102]
Length = 796
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 206/370 (55%), Gaps = 23/370 (6%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQQ +I L G DVL ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 73 LTEVQQQAIPLALKGNDVLGAAKTGSGKTLAFLIPVLEKL--YRAQWTEFDGLGALIISP 130
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAVQIFEVLRKIGR-YHVFSAGLVIGGKNLKEEAERLAR-MNILVCTPGRMLQHLDQ 188
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
T L + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT + V LA
Sbjct: 189 TAGLDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFSATQSKKVSDLA 245
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L+ P + +H S P +L+QH+I TP +L L F+ +
Sbjct: 246 RLSLKEP------EYVSVHEAATS-ATPTNLQQHYITTPLPEKLDTLYGFLKSNLK---- 294
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
SK++VF+++ + E L I LHG Q R E+ F + K L
Sbjct: 295 ---SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQRQVARLEITSRFTAAKHSCL 350
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVE 773
TDV ARG+D P VDW++Q P Y+HRVGRTAR G ++LFL PS E +V+
Sbjct: 351 FATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRTARYQSNGRAVLFLDPSEEPGMVK 410
Query: 774 ELQNRRIRIE 783
L+ ++I I+
Sbjct: 411 RLEQKKIPIQ 420
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQQ +I L G DVL ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 73 LTEVQQQAIPLALKGNDVLGAAKTGSGKTLAFLIPVLEKL--YRAQWTEFDGLGALIISP 130
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ + + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 131 TRELAVQIFEVLRKIGR-YHVFSAGLVIGGKNLKEEAERLAR-MNILVCTPGRMLQHLDQ 188
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T L + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT
Sbjct: 189 TAGLDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFSAT 236
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T L + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT + V L
Sbjct: 188 QTAGLDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFSATQSKKVSDL 244
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P + +H S P +L+QH+I TP +L L F+ +
Sbjct: 245 ARLSLKEP------EYVSVHEAATS-ATPTNLQQHYITTPLPEKLDTLYGFLKSNLK--- 294
Query: 306 EDEESKMLVFMAT 318
SK++VF+++
Sbjct: 295 ----SKIIVFLSS 303
>gi|403216428|emb|CCK70925.1| hypothetical protein KNAG_0F02610 [Kazachstania naganishii CBS
8797]
Length = 762
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 255/498 (51%), Gaps = 46/498 (9%)
Query: 404 KNLNEGMNIT---QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK 460
+N+ +G++ + ++T +Q+ SI L G DVL ++TGSGKTLA+ +P+++KL R +
Sbjct: 50 RNVLKGLSASAFVKLTAIQRESIPVSLQGHDVLAAAKTGSGKTLAFLVPVLEKL--YRER 107
Query: 461 ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISI 520
+ DG+ A+II PTRELA+Q E+ K+ ++ + GG+ +K E RI K I+I
Sbjct: 108 WTEFDGLGALIISPTRELAMQIYEVLVKVGSQCSFSA-GLVIGGKDVKYESERISK-INI 165
Query: 521 LVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSI 580
L+ TPGR+L H L S ++ LVLDEADR LD G+++ + I+ P Q++
Sbjct: 166 LIGTPGRILQHLDQAVGLNASNLQMLVLDEADRCLDMGFKKTLDA---IVGNLPPMRQTL 222
Query: 581 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNT-TDSLVIPDSLKQHFIVTPPKLRLV 639
L SAT + ++ LA ++L + I ++ + PD+L+Q++I +L
Sbjct: 223 LFSATQSASLADLARLSLTDYKNIGTLETGSGQQVGAANPATPDTLQQYYIDVSLPDKLD 282
Query: 640 ALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSER 699
L SFI + SKM+VF+++ + E + I+ LHG Q+ R
Sbjct: 283 ILFSFIKSHLK-------SKMIVFLSSGKQVHFIYETFRK-MQPGISLMHLHGRQKQTAR 334
Query: 700 TEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS 759
T+ F + L TDV ARG+D P VDW+VQ P + Y+HRVGR+AR G +G
Sbjct: 335 TDTLDKFVRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDADTYIHRVGRSARYGKKGK 394
Query: 760 SLLFLIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATAL 818
+L+ L P E+ + L+ ++I E++ ++ ++
Sbjct: 395 ALIMLTPQEMDPFLSRLKTKKIEPEKL-----------------------NIKQSKKKSI 431
Query: 819 QMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
+ +S + + L A K + S++R + Y + + +F F +I FA S L AP
Sbjct: 432 KPQLQSLLFKDPELKYLAQKAFISYIR--SIYVQKDKEVFKFNEIPTEEFANSLGLPGAP 489
Query: 879 SV-ISGIGKPKNKEELKN 895
+ I G+ +ELKN
Sbjct: 490 KIKIKGMKAITRAKELKN 507
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 3 ITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVI 62
++T +Q+ SI L G DVL ++TGSGKTLA+ +P+++KL R + + DG+ A+I
Sbjct: 61 FVKLTAIQRESIPVSLQGHDVLAAAKTGSGKTLAFLVPVLEKL--YRERWTEFDGLGALI 118
Query: 63 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 122
I PTRELA+Q E+ K+ ++ + GG+ +K E RI K I+IL+ TPGR+L H
Sbjct: 119 ISPTRELAMQIYEVLVKVGSQCSFSA-GLVIGGKDVKYESERISK-INILIGTPGRILQH 176
Query: 123 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT
Sbjct: 177 LDQAVGLNASNLQMLVLDEADRCLDMGFKKTLD---AIVGNLPPMRQTLLFSAT 227
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT + ++ LA ++
Sbjct: 183 LNASNLQMLVLDEADRCLDMGFKKTLD---AIVGNLPPMRQTLLFSATQSASLADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNT-TDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 308
L + I ++ + PD+L+Q++I +L L SFI +
Sbjct: 240 LTDYKNIGTLETGSGQQVGAANPATPDTLQQYYIDVSLPDKLDILFSFIKSHLK------ 293
Query: 309 ESKMLVFMAT 318
SKM+VF+++
Sbjct: 294 -SKMIVFLSS 302
>gi|326929609|ref|XP_003210951.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Meleagris
gallopavo]
Length = 579
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 252/473 (53%), Gaps = 49/473 (10%)
Query: 422 SIQPILDGGDVLVRSQ-TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELAL 480
++Q + +G D + SQ TGSGKTLA+ IPI++ L K+ +K + A+II PTRELA+
Sbjct: 23 ALQELAEGADSVSLSQVTGSGKTLAFVIPILEILLRREEKL-KKMQVGAIIITPTRELAI 81
Query: 481 QTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLD-HCKHTETL 538
Q E+ T K F L GG + + ++ G +I+VATPGRL D + + L
Sbjct: 82 QIDEVLTHFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGL 141
Query: 539 KFSK----VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
+ ++ LVLDEADR+LD G+E + L L KQ+ ++ L SAT T V+ L
Sbjct: 142 DLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQR---RTGLFSATQTQEVENLV 198
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
L+NP++I + T++ P L+ ++++ + L F+ +
Sbjct: 199 RAGLRNPVRISVKEKGVA--ATNTQKTPTRLENYYMICKADEKFNQLVHFL-------RQ 249
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
++ K LVF +T +Y+ + L +++ + + +HG M + +R ++F FR + G+L
Sbjct: 250 HKQEKHLVFFSTCACVEYYGKALESLI-KQVKIMCIHGKM-KHKRNKIFTEFRKLPGGIL 307
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
+CTDV ARG+D+P V W++QY PSS++ +VHR GRTAR+G+ GS+L+FL+P E +
Sbjct: 308 VCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYINF 367
Query: 775 LQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
L N++ ++E+K + + +LL +++ A A + FE +
Sbjct: 368 LSINQKCPMQEMKPQGNVLDLLP-------------KLKSMALADRAVFEKGM------- 407
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
K + S+++ YA + +L IF K + A+ FAL P + GK
Sbjct: 408 ----KAFVSYIQAYAKHECNL--IFRIKDLDFASLARGFALLKMPKMPELRGK 454
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 71/321 (22%)
Query: 13 SIQPILDGGDVLVRSQ-TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELAL 71
++Q + +G D + SQ TGSGKTLA+ IPI++ L K+ +K + A+II PTRELA+
Sbjct: 23 ALQELAEGADSVSLSQVTGSGKTLAFVIPILEILLRREEKL-KKMQVGAIIITPTRELAI 81
Query: 72 QTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKHTETLK 130
Q E+ T K F L GG + + ++ G +I+VATPGRL
Sbjct: 82 QIDEVLTHFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRL----------- 130
Query: 131 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWCKHTETL 190
E L +AD L A+C
Sbjct: 131 ----EDLFRRKAD--------------------------------GLDLASC-------- 146
Query: 191 KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTL 250
++ LVLDEADR+LD G+E + L L KQ+ ++ L SAT T V+ L L
Sbjct: 147 -VKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQR---RTGLFSATQTQEVENLVRAGL 202
Query: 251 QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+NP++I + T++ P L+ ++++ + L F+ + ++
Sbjct: 203 RNPVRISVKEKGVA--ATNTQKTPTRLENYYMICKADEKFNQLVHFL-------RQHKQE 253
Query: 311 KMLVFMATQDMADYHTELLST 331
K LVF +T +Y+ + L +
Sbjct: 254 KHLVFFSTCACVEYYGKALES 274
>gi|401424187|ref|XP_003876579.1| DEAD-box helicase-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492822|emb|CBZ28100.1| DEAD-box helicase-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 788
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 184/589 (31%), Positives = 262/589 (44%), Gaps = 103/589 (17%)
Query: 389 PTSYEEFPG----IHPFMKKNLNEGMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKT 443
PT + P +HP + + L E M I +T +Q+L +LD DVLVRS+TGSGKT
Sbjct: 124 PTDIDSLPALVELVHPKLLRPLTESMKIENLTRIQKLCWAAMLDSDSDVLVRSETGSGKT 183
Query: 444 LAYAIPIIQKL--QEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWL 501
LAYA+P + +L + + ISR G +I+ PTREL LQ E T L + +I +
Sbjct: 184 LAYALPTLHRLLVECDKTPISRDVGTLIIIMCPTRELVLQVTETVTTLVRCAQFITVGGI 243
Query: 502 TGGEKMKSEKARIRKGISILVATPGRLLDH------------------------------ 531
GGE EKAR+RKGI ILV TPGRLLDH
Sbjct: 244 HGGENRHKEKARLRKGIPILVTTPGRLLDHLKTTASFTVAHAQTVIMDEADRLLDMGFEK 303
Query: 532 ------------CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQ- 578
C H LK V + D +R+ R+IA E + F
Sbjct: 304 ALREIMELLEKKCHHASGLKRVLVSATITDGVERLSHFALRRNIARIGET----QDTFSV 359
Query: 579 --SILLSATLTPAVQRLAGMTLQNPIQIDA-----------ADSTD-IHNTTDSLVIPDS 624
++ + P RL+ + Q+DA ADST+ ++ L P
Sbjct: 360 PTTLKQHYVMVPVKHRLSVLLSFLRSQLDAGANKIIVFVSTADSTEFLYLLASRLQSPFH 419
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE--------- 675
+ + + R ++++ + + N + D S + +D++D E
Sbjct: 420 KRSYEGKVITRSRGASMSTKKMVETANRHLDTGSATDEVVTFEDVSDDEREGDARLDSAA 479
Query: 676 -LLSTVLGENIAFFKLHGSMSQSERTEVFKTF-------RSVKSGVLICTDVAARGLDLP 727
L L N+ FKLHG+MSQ +R VF F RS KS VL CTDVAARGLD+P
Sbjct: 480 ALQRAFLDANV--FKLHGNMSQVDRAAVFHAFKFGTRKSRSDKS-VLFCTDVAARGLDMP 536
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQN---------- 777
+DWIV Y P+ YVHR+GRTAR+G+ G S+LFL P E L +
Sbjct: 537 KIDWIVHYDPPTDPKSYVHRIGRTARIGNSGDSILFLAPDERGYAAYLTHFIHSQIQQSD 596
Query: 778 --RRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAAT---ALQMSFESAVLQQKIL 832
+ E K + L L + + + + V A A+Q E ++ L
Sbjct: 597 SKEAAEMSERKYETFLFYLTKLDPKSNHMWMQSAAVLERAISRLAMQRDVERGEDAKESL 656
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
+ A Y S++R YA K + +F +HLGH A+SF + +PS +
Sbjct: 657 YRVALFAYQSYLRAYAGMPKQTKSLFFSSPLHLGHAAQSFGIDKSPSEV 705
Score = 173 bits (439), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 165/327 (50%), Gaps = 72/327 (22%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL--QEMRPKISRKDG 57
M I +T +Q+L +LD DVLVRS+TGSGKTLAYA+P + +L + + ISR G
Sbjct: 149 MKIENLTRIQKLCWAAMLDSDSDVLVRSETGSGKTLAYALPTLHRLLVECDKTPISRDVG 208
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+I+ PTREL LQ E T L + +I + GGE EKAR+RKGI ILV TPG
Sbjct: 209 TLIIIMCPTRELVLQVTETVTTLVRCAQFITVGGIHGGENRHKEKARLRKGIPILVTTPG 268
Query: 118 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
RLLDH K T + + + +++DEADR+LD G+E+ + E +E+L+K+
Sbjct: 269 RLLDHLKTTASFTVAHAQTVIMDEADRLLDMGFEKALREIMELLEKK------------- 315
Query: 178 TPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSAT 237
C H LK R+L +SAT
Sbjct: 316 ------CHHASGLK-------------RVL--------------------------VSAT 330
Query: 238 LTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
+T V+RL+ L+ I I T D+ +P +LKQH+++ P K RL L SF+
Sbjct: 331 ITDGVERLSHFALRRNI-------ARIGETQDTFSVPTTLKQHYVMVPVKHRLSVLLSFL 383
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADY 324
+ + +K++VF++T D ++
Sbjct: 384 RSQL----DAGANKIIVFVSTADSTEF 406
>gi|449460880|ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
sativus]
gi|449515784|ref|XP_004164928.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
sativus]
Length = 587
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 237/472 (50%), Gaps = 49/472 (10%)
Query: 416 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVIIL 473
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ RPK + +II
Sbjct: 39 TPVQAATIPLLCSHKDVAVDAATGSGKTLAFVVPVVEILRRCSSRPKPHH---VMGIIIS 95
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHC 532
PTREL+ Q E+ + + L GG +K + I + G ++L+ TPGRL D
Sbjct: 96 PTRELSSQIYEVARPFVSTLSNFKAVLLVGGADVKVDMKVIEEEGANLLIGTPGRLFDIM 155
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
E L F E L+LDEADR+LD G+++ I + L K + ++ L SAT T AV+
Sbjct: 156 DRIENLDFRNFEVLILDEADRLLDMGFQKQITSIISRLPKLR---RTGLFSATQTEAVEE 212
Query: 593 LAGMTLQNPIQIDA-ADSTDIHNTTDSLV---IPDSLKQHFIVTPPKLRLVALASFILGK 648
L+ L+NPI+++ A+S ++ L P SL ++ + L ++
Sbjct: 213 LSKAGLRNPIRVEVKAESKPGPLSSTQLASSKTPSSLHIEYLECEADKKSTQLVDILI-- 270
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLG-ENIAFFKLHGSMSQSERTEVFKTFR 707
+++ K++V+ T DY +L + G + + LHG M Q+ R + +F
Sbjct: 271 -----KNKSKKIIVYFMTCACVDYWGVVLPQLTGLKGLFLIPLHGKMKQTAREKALASFV 325
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
S+ SGVL+CTDVAARGLD+P VD IVQY P +VHRVGRTAR+G EGS+++FL+P
Sbjct: 326 SLSSGVLLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGREGSAIVFLLPK 385
Query: 768 EVKLVEELQNRRIRIEE-IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E +E L RR+ I+E I D A+ + +A
Sbjct: 386 EEAYIEFLSIRRVPIQEKIYCSD-------------------------ASDIIPQIRTAA 420
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
+ + + K + S++R Y + IF +K++ +G A + L P
Sbjct: 421 KRDRDVMEKGVKAFVSFIRAYKEHH--CSFIFRWKELEVGKLAMGYGLLQLP 470
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM--RPKISRKDGIYAVIIL 64
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ RPK + +II
Sbjct: 39 TPVQAATIPLLCSHKDVAVDAATGSGKTLAFVVPVVEILRRCSSRPKPHH---VMGIIIS 95
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHC 123
PTREL+ Q E+ + + L GG +K + I + G ++L+ TPGRL D
Sbjct: 96 PTRELSSQIYEVARPFVSTLSNFKAVLLVGGADVKVDMKVIEEEGANLLIGTPGRLFDIM 155
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
E L F E L+LDEADR+LD G+++ I + L K + ++ L SAT T A
Sbjct: 156 DRIENLDFRNFEVLILDEADRLLDMGFQKQITSIISRLPKLR---RTGLFSATQTEA 209
>gi|363756288|ref|XP_003648360.1| hypothetical protein Ecym_8261 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891560|gb|AET41543.1| Hypothetical protein Ecym_8261 [Eremothecium cymbalariae
DBVPG#7215]
Length = 775
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 255/521 (48%), Gaps = 48/521 (9%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
RR+ +S++E P I K L E ++T +Q+ SI L G D+L +
Sbjct: 28 RRINDFGATKCTASSFDELP-ISEVTLKGLKES-GFIKLTDIQRDSIPMALKGHDILGAA 85
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
+TGSGKTLA+ IP+I+KL R K + DG+ A+II PTRELA+Q E+ K+ K T
Sbjct: 86 KTGSGKTLAFLIPVIEKL--YREKWTEFDGLGALIISPTRELAMQIYEVLIKIGK-HTSF 142
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
+ GG+ +K E RI K I+IL+ TPGR+L H L S ++ LVLDEADR LD
Sbjct: 143 SAGLVIGGKDVKFEMDRISK-INILIGTPGRILQHMDQAVGLTSSNLQILVLDEADRCLD 201
Query: 557 QGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTT 616
G+++ + + L P Q++L SAT + ++ LA ++L + I +D +
Sbjct: 202 MGFKKTLDAIVSNLP---PDRQTLLFSATQSQSLADLARLSLVDYKSI----GSDTLLSK 254
Query: 617 DSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTEL 676
+ P++L+Q +I +L L SFI SK +VF+++ + E
Sbjct: 255 NQPATPETLEQSYIDVELPDKLDILFSFIKSHLN-------SKTVVFLSSSKQVHFVYET 307
Query: 677 LSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
L I+ LHG Q+ RTE F + L TDV ARG+D P VDW+VQ
Sbjct: 308 FRK-LQPGISLMHLHGRQKQTARTETLDKFSRAQHACLFSTDVVARGIDFPTVDWVVQVD 366
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV-KLVEELQNRRIRIEEIKLKDCLQNLL 795
P Y+HR GR+AR G G L+ L P E ++ L+ + I ++ +K
Sbjct: 367 CPEDVDTYIHRAGRSARYGKSGKCLIMLTPQEEPGFLKRLKTKMIEPKKSVIK------- 419
Query: 796 SVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLR 855
++ +++ +S + + L A K + S+VR + Y +
Sbjct: 420 ----------------QSKRKSIRNQLQSLLFKSPELKYLAQKAFISYVR--SIYIQKDT 461
Query: 856 HIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKEELKN 895
+F F ++ L FA S L AP + I G+ + +ELKN
Sbjct: 462 EVFKFSELPLEEFASSLGLPGAPKIKIKGMKSIERSKELKN 502
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G D+L ++TGSGKTLA+ IP+I+KL R K + DG+ A+II
Sbjct: 63 KLTDIQRDSIPMALKGHDILGAAKTGSGKTLAFLIPVIEKL--YREKWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ K T + GG+ +K E RI K I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLIKIGK-HTSFSAGLVIGGKDVKFEMDRISK-INILIGTPGRILQHMD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QAVGLTSSNLQILVLDEADRCLDMGFKKTLDAIVSNL---PPDRQTLLFSAT 227
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + ++ LA ++
Sbjct: 183 LTSSNLQILVLDEADRCLDMGFKKTLDAIVSNL---PPDRQTLLFSATQSQSLADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + I +D + + P++L+Q +I +L L SFI
Sbjct: 240 LVDYKSI----GSDTLLSKNQPATPETLEQSYIDVELPDKLDILFSFIKSHLN------- 288
Query: 310 SKMLVFMAT 318
SK +VF+++
Sbjct: 289 SKTVVFLSS 297
>gi|294955800|ref|XP_002788686.1| ATP-dependent RNA helicase dbp-4, putative [Perkinsus marinus ATCC
50983]
gi|239904227|gb|EER20482.1| ATP-dependent RNA helicase dbp-4, putative [Perkinsus marinus ATCC
50983]
Length = 833
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 242/431 (56%), Gaps = 34/431 (7%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
T++T +Q+ +I L G DVL ++TGSGK+LA+ IP+I+KL M K S DG+ AV
Sbjct: 139 GFTKLTPIQRSAIPYALAGRDVLGEARTGSGKSLAFIIPVIEKLYRM--KWSADDGVGAV 196
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
+I PTREL+ Q + ++ + + GG K + E+ ++ +SI+V TPGRLL
Sbjct: 197 LISPTRELSAQIFTVLQQVGSHHDFSA-GCVVGGRKFQEEQ-KVFPSLSIVVCTPGRLLQ 254
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H + T S V+ LVLDEADRILD G++R I L+ L P+ Q++L SAT+ +V
Sbjct: 255 HIEETAGSDLSNVQVLVLDEADRILDLGFKRTIELILDALP---PKRQTLLFSATMRTSV 311
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
Q+LA + L NP + S ++++ T P L+Q + + ++ +L SF+ Q
Sbjct: 312 QQLATLALDNPELLSV--SRNLNSAT-----PTGLRQLCMTVKLEEKVNSLFSFLKTHAQ 364
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
+K++VF++ + E L +A +LHG MS +R +VF F S
Sbjct: 365 -------TKIIVFVSATKQVRFLYETFRR-LRPGLAVLELHGGMSLDKRMKVFDQFASKD 416
Query: 711 SGV-LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV 769
G+ LICTDVAARG+D P VDW++Q AP ++ Y+HRVGRTAR G++L+F E
Sbjct: 417 KGLCLICTDVAARGVDFPQVDWVIQMDAPDTADTYIHRVGRTARFDRNGNALMFATEVEQ 476
Query: 770 K-LVEELQNRR--IRIEEIKLKDC------LQNLLSVKMEGDLSRLADGNVETAATALQM 820
+ L+ EL ++ +R+ I + LQ+LL+ E D+ LA V+ A A+ +
Sbjct: 477 ESLLPELTQKKVDVRVTSINRRRMFNIAGKLQSLLA--SEPDVKHLAIKAVQVYARAVAL 534
Query: 821 SFESAVLQQKI 831
+ + + + ++
Sbjct: 535 TGRTRLTEDQV 545
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
T++T +Q+ +I L G DVL ++TGSGK+LA+ IP+I+KL M K S DG+ AV
Sbjct: 139 GFTKLTPIQRSAIPYALAGRDVLGEARTGSGKSLAFIIPVIEKLYRM--KWSADDGVGAV 196
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
+I PTREL+ Q + ++ + + GG K + E+ ++ +SI+V TPGRLL
Sbjct: 197 LISPTRELSAQIFTVLQQVGSHHDFSA-GCVVGGRKFQEEQ-KVFPSLSIVVCTPGRLLQ 254
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
H + T S V+ LVLDEADRILD G++R I L+ L P+ Q++L SAT+
Sbjct: 255 HIEETAGSDLSNVQVLVLDEADRILDLGFKRTIELILDAL---PPKRQTLLFSATM 307
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 17/126 (13%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
S V+ LVLDEADRILD G++R I L+ L P+ Q++L SAT+ +VQ+LA + L
Sbjct: 264 LSNVQVLVLDEADRILDLGFKRTIELILDAL---PPKRQTLLFSATMRTSVQQLATLALD 320
Query: 252 NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESK 311
NP + S ++++ T P L+Q + + ++ +L SF+ Q +K
Sbjct: 321 NPELLSV--SRNLNSAT-----PTGLRQLCMTVKLEEKVNSLFSFLKTHAQ-------TK 366
Query: 312 MLVFMA 317
++VF++
Sbjct: 367 IIVFVS 372
>gi|449470439|ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
sativus]
Length = 734
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 234/421 (55%), Gaps = 28/421 (6%)
Query: 369 PDIPNVPTRRLKPVSEALFA-PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPIL 427
P +PN P R+ + + +A T +++ P I K L + I +T +Q+ S+ L
Sbjct: 45 PPLPNAPIGRIDDDTYSRYAGATRFDQLP-ISSKTKDGLRKAEFI-DMTDIQKASLPHAL 102
Query: 428 DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFT 487
G D+L ++TGSGKTLA+ IP+++KL R + + G+ ++II PTREL Q ++
Sbjct: 103 CGRDILGAAKTGSGKTLAFLIPVLEKL--YRERWGPEFGVGSIIISPTRELGAQLFDVLK 160
Query: 488 KLCKSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+ K F L GG K + +EK + + ++ILV TPGRLL H T S+++ L
Sbjct: 161 AVGK-FHNFSAGLLIGGRKDVNTEKEHVNE-LNILVCTPGRLLQHMDETPNFDCSQLQVL 218
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA 606
VLDEADRILD G+++ + + L K + Q+ L SAT T +VQ LA ++L++P
Sbjct: 219 VLDEADRILDVGFKKTLNAIISQLPKHR---QTFLFSATQTKSVQDLARLSLKDP----- 270
Query: 607 ADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMAT 666
+ +H + + P+SL+Q +V P + +L L SFI SK+LVF+++
Sbjct: 271 -EYLSVHEES-TTATPNSLQQTAMVVPLEQKLDMLWSFIKAHLN-------SKILVFLSS 321
Query: 667 QDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
+ E L I LHG M Q +R ++ F K VL TDVA+RGLD
Sbjct: 322 CKQVKFVFETFKK-LRPGIPLKCLHGRMKQDKRMGIYSEF-CEKRSVLFSTDVASRGLDF 379
Query: 727 -PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEI 785
VDW+VQ P Y+HRVGRTAR G S+LF++PSE+K++E+L++ ++ I+ I
Sbjct: 380 NKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGKSVLFIMPSEMKMLEQLESAKVPIQLI 439
Query: 786 K 786
K
Sbjct: 440 K 440
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ S+ L G D+L ++TGSGKTLA+ IP+++KL R + + G+ ++II P
Sbjct: 90 MTDIQKASLPHALCGRDILGAAKTGSGKTLAFLIPVLEKL--YRERWGPEFGVGSIIISP 147
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRLLDHCK 124
TREL Q ++ + K F L GG K + +EK + + ++ILV TPGRLL H
Sbjct: 148 TRELGAQLFDVLKAVGK-FHNFSAGLLIGGRKDVNTEKEHVNE-LNILVCTPGRLLQHMD 205
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S+++ LVLDEADRILD G+++ + + L K + Q+ L SAT T
Sbjct: 206 ETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPKHR---QTFLFSATQT 256
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S+++ LVLDEADRILD G+++ + + L K + Q+ L S
Sbjct: 196 TPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPKHR---QTFLFS 252
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +VQ LA ++L++P + +H + + P+SL+Q +V P + +L L S
Sbjct: 253 ATQTKSVQDLARLSLKDP------EYLSVHEES-TTATPNSLQQTAMVVPLEQKLDMLWS 305
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI SK+LVF+++
Sbjct: 306 FIKAHLN-------SKILVFLSS 321
>gi|302306975|ref|NP_983443.2| ACR040Wp [Ashbya gossypii ATCC 10895]
gi|442570096|sp|Q75C76.2|DBP4_ASHGO RecName: Full=ATP-dependent RNA helicase DBP4
gi|299788776|gb|AAS51267.2| ACR040Wp [Ashbya gossypii ATCC 10895]
gi|374106649|gb|AEY95558.1| FACR040Wp [Ashbya gossypii FDAG1]
Length = 763
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 256/520 (49%), Gaps = 47/520 (9%)
Query: 378 RLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQ 437
R+K ++++ P I K L E I ++T +Q+ +I L G DVL ++
Sbjct: 29 RIKDYDAKTCRAVTFQDLP-ISSGTVKGLKEAAYI-KMTDIQRAAIPVALKGHDVLGAAK 86
Query: 438 TGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIV 497
TGSGKTLA+ +P+++KL R + DG+ A++I PTRELA+Q E+ K+ K ++
Sbjct: 87 TGSGKTLAFLVPVLEKLYHER--WTELDGLGALVISPTRELAMQIYEVLVKIGKYMSFSA 144
Query: 498 PSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQ 557
+ GG+ +K E R+ K I+IL+ TPGRLL H + L S ++ LVLDEADR LD
Sbjct: 145 -GLVIGGKDVKFEMERVSK-INILIGTPGRLLQHMDQSVGLNTSNLQILVLDEADRCLDM 202
Query: 558 GYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTD 617
G+++ + + L P Q++L SAT + ++ LA ++L + + D N
Sbjct: 203 GFKKALDAIVSNLP---PSRQTLLFSATQSQSLADLARLSLADYKTVGTMDGPSSKNKP- 258
Query: 618 SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 677
P++L+Q +I +L L SFI + SKM+VF+++ + E
Sbjct: 259 --ATPENLEQFYIQVALPDKLDILFSFIKSHLK-------SKMIVFLSSSKQVHFVYETF 309
Query: 678 STVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTA 737
+ I+ LHG Q+ RTE F + L TDV ARG+D P VDW++Q
Sbjct: 310 RK-MQPGISLMHLHGRQKQTARTETLDKFSRAQHVCLFSTDVVARGIDFPSVDWVIQTDC 368
Query: 738 PSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSV 797
P Y+HR GR+AR G G SLL L P E ++
Sbjct: 369 PEDVDTYIHRAGRSARYGKTGKSLLMLTPQE-----------------------EDAFLA 405
Query: 798 KMEGDLSRLADGNV-ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+++G L + N+ ++ +++ +S + + L A K + S+VR + Y +
Sbjct: 406 RLKGKLIEPSKLNIKQSKRKSIKPQLQSLLFKDPELKYLAQKAFISYVR--SIYIQKDTE 463
Query: 857 IFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKEELKN 895
+F F ++ L FA S L AP V I G + +ELKN
Sbjct: 464 VFKFNELPLEEFAASLGLPGAPQVKIKGKKSIEKAKELKN 503
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 107/172 (62%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ +I L G DVL ++TGSGKTLA+ +P+++KL R + DG+ A++I
Sbjct: 63 KMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLEKLYHER--WTELDGLGALVIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ K ++ + GG+ +K E R+ K I+IL+ TPGRLL H
Sbjct: 121 PTRELAMQIYEVLVKIGKYMSFSA-GLVIGGKDVKFEMERVSK-INILIGTPGRLLQHMD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
+ L S ++ LVLDEADR LD G+++ + + L P Q++L SAT
Sbjct: 179 QSVGLNTSNLQILVLDEADRCLDMGFKKALDAIVSNL---PPSRQTLLFSAT 227
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + + L P Q++L SAT + ++ LA ++
Sbjct: 183 LNTSNLQILVLDEADRCLDMGFKKALDAIVSNL---PPSRQTLLFSATQSQSLADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + + D N P++L+Q +I +L L SFI +
Sbjct: 240 LADYKTVGTMDGPSSKNKP---ATPENLEQFYIQVALPDKLDILFSFIKSHLK------- 289
Query: 310 SKMLVFMAT 318
SKM+VF+++
Sbjct: 290 SKMIVFLSS 298
>gi|307198143|gb|EFN79171.1| Probable ATP-dependent RNA helicase DDX10 [Harpegnathos saltator]
Length = 738
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 212/373 (56%), Gaps = 22/373 (5%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T +Q+ SI L G D+L ++TGSGKTLA+ +PI++ L + ++ DG+ ++I P
Sbjct: 1 MTDIQRQSIGLALQGNDILGAAKTGSGKTLAFLVPILEIL--YCKQWTKLDGLGVLVITP 58
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 534
TRELA Q + K+ + + + GG+ +K E R+ + ++++ TPGRLL H
Sbjct: 59 TRELAYQIYDTLRKVGQ-YHDFSTGLIIGGKDLKFEAKRMDQ-YNVIICTPGRLLQHMDE 116
Query: 535 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLA 594
+ ++ LVLDEADR LD G+E+ + +E L P+ Q++L SAT T +V+ LA
Sbjct: 117 NQLFNCVNMQILVLDEADRCLDMGFEKTMNAIIENLP---PKRQTLLFSATQTKSVKDLA 173
Query: 595 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 654
++L++P+ I A + + + V P+SL Q +IV + +L L SFI +
Sbjct: 174 RLSLRDPLYISAHEYS-------AHVTPESLHQSYIVCALEDKLAMLWSFIRNHLK---- 222
Query: 655 DEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVL 714
K++VF ++ Y E L I+ L+ ++ Q R +++TFR + VL
Sbjct: 223 ---QKIIVFFSSCKQVKYVYEAFCR-LRPGISLLGLYSTLHQLRRMSIYETFRKKQHAVL 278
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
TD+AARGLD P V+W++Q P Y+HRVGRTAR G SLL L+PSE ++E+
Sbjct: 279 FATDIAARGLDFPAVNWVIQMDCPEDVNAYIHRVGRTARFKSGGESLLVLLPSEEVMIEK 338
Query: 775 LQNRRIRIEEIKL 787
L+ R+I I I++
Sbjct: 339 LRQRKIPINMIEI 351
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ SI L G D+L ++TGSGKTLA+ +PI++ L + ++ DG+ ++I P
Sbjct: 1 MTDIQRQSIGLALQGNDILGAAKTGSGKTLAFLVPILEIL--YCKQWTKLDGLGVLVITP 58
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q + K+ + + + GG+ +K E R+ + ++++ TPGRLL H
Sbjct: 59 TRELAYQIYDTLRKVGQ-YHDFSTGLIIGGKDLKFEAKRMDQ-YNVIICTPGRLLQHMDE 116
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ ++ LVLDEADR LD G+E+ + +E L P+ Q++L SAT T +
Sbjct: 117 NQLFNCVNMQILVLDEADRCLDMGFEKTMNAIIENL---PPKRQTLLFSATQTKS 168
>gi|302902561|ref|XP_003048671.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729605|gb|EEU42958.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 804
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 237/475 (49%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E + +T VQ +I L G DVL ++TGSGKTLA+ IP+++KL R + + DG+
Sbjct: 68 EASHFQVLTDVQAQAIPLALKGNDVLGAAKTGSGKTLAFLIPVLEKL--YRAQWTEYDGL 125
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
A+I+ PTRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR
Sbjct: 126 GALILSPTRELAVQIFEVLRKVGRNHVFSA-GLVIGGKSLKEEAERLDR-MNILVCTPGR 183
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
+L H T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT +
Sbjct: 184 MLQHLDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFSATQS 240
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V LA ++L++P + +H S P +L+QH+I TP +L L FI
Sbjct: 241 KKVSDLARLSLKDP------EYVSVHEAAAS-ATPTTLQQHYISTPLTEKLDTLYGFIKA 293
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
+ SK++VF+++ + E L I LHG Q R E+ F
Sbjct: 294 NLK-------SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQKQIARMEITSRFT 345
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
+ K L TDV ARG+D P VDW++Q P Y+HRVGRTAR G ++LFL PS
Sbjct: 346 AAKHSCLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYQSNGRAVLFLDPS 405
Query: 768 EV-KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E ++++L+ ++I I+ + E ++ +S
Sbjct: 406 EEPGMLKKLEQKKIPIQRVN-----------------------VKEKKKKNIKDHLQSMC 442
Query: 827 LQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L K + S+ + Y KD +F F ++ L FA S L P +
Sbjct: 443 FQNPDLKYLGQKAFISYAKSIYIQKDKD---VFKFDKLDLDGFAASLGLPGTPQI 494
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L G DVL ++TGSGKTLA+ IP+++KL R + + DG+ A+I+ P
Sbjct: 75 LTDVQAQAIPLALKGNDVLGAAKTGSGKTLAFLIPVLEKL--YRAQWTEYDGLGALILSP 132
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA+Q E+ K+ ++ + + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 133 TRELAVQIFEVLRKVGRNHVFSA-GLVIGGKSLKEEAERLDR-MNILVCTPGRMLQHLDQ 190
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L K + Q+++ SAT
Sbjct: 191 TAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFSAT 238
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + +E L K + Q+++ S
Sbjct: 180 TPGRMLQHLDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSR---QTLMFS 236
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L++P + +H S P +L+QH+I TP +L L
Sbjct: 237 ATQSKKVSDLARLSLKDP------EYVSVHEAAAS-ATPTTLQQHYISTPLTEKLDTLYG 289
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 290 FIKANLK-------SKIIVFLSS 305
>gi|195048518|ref|XP_001992542.1| GH24149 [Drosophila grimshawi]
gi|193893383|gb|EDV92249.1| GH24149 [Drosophila grimshawi]
Length = 798
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 208/381 (54%), Gaps = 20/381 (5%)
Query: 391 SYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPI 450
++ +FP + +K L E IT T VQ+ SI P L G DVL + TGSGKTLA+ IP+
Sbjct: 64 TFAQFP-LSQKTQKALAESKFIT-ATEVQRQSIGPALQGKDVLGAAITGSGKTLAFLIPV 121
Query: 451 IQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE 510
++ L K SR DG+ A+II PTRELA Q E K+ K + + GG+ +K E
Sbjct: 122 LEHL--YMNKWSRSDGVGAIIISPTRELAYQIFETLKKVGKHHDFSA-GLIIGGKNLKFE 178
Query: 511 KARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL 570
+ R+ + +IL+ TPGRLL H S +E LVLDEADR LD G+++ + +E
Sbjct: 179 RTRMDQ-CNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNAIIENF 237
Query: 571 KKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQID---AADSTDIHNTTDSLVIPDSLKQ 627
P Q++L SAT T ++ LA + LQ P+ + A +T + L +P+ L+Q
Sbjct: 238 P---PDRQTLLFSATQTNTLEDLARLNLQQPVYVGYGTANSTTTPASNAAVLALPELLQQ 294
Query: 628 HFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAF 687
++V P + ++ L SFI + K++VF+A+ A Y E+ L +
Sbjct: 295 SYVVLPLEEKITMLWSFIKNHLKQ-------KIIVFVASCKQAKYLYEIFCK-LRPGVGL 346
Query: 688 FKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHR 747
L+G++ Q +R +++ F V+ TDVA+RGLD P V+W++Q P + Y+HR
Sbjct: 347 LALYGTLHQDKRIAIYEEFLRKSQVVMFATDVASRGLDFPAVNWVLQLDCPEDVSQYIHR 406
Query: 748 VGRTARVGHEGSSLLFLIPSE 768
GR+AR G LL + P+E
Sbjct: 407 AGRSARNKSHGECLLVMTPNE 427
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
T VQ+ SI P L G DVL + TGSGKTLA+ IP+++ L K SR DG+ A+II P
Sbjct: 86 ATEVQRQSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHL--YMNKWSRSDGVGAIIISP 143
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q E K+ K + + GG+ +K E+ R+ + +IL+ TPGRLL H
Sbjct: 144 TRELAYQIFETLKKVGKHHDFSA-GLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDE 201
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
S +E LVLDEADR LD G+++ + +E P Q++L SAT T
Sbjct: 202 NPLFNTSTMEMLVLDEADRCLDMGFQKTLNAIIENF---PPDRQTLLFSATQT 251
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 193 SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQN 252
S +E LVLDEADR LD G+++ + +E P Q++L SAT T ++ LA + LQ
Sbjct: 208 STMEMLVLDEADRCLDMGFQKTLNAIIENF---PPDRQTLLFSATQTNTLEDLARLNLQQ 264
Query: 253 PIQID---AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
P+ + A +T + L +P+ L+Q ++V P + ++ L SFI +
Sbjct: 265 PVYVGYGTANSTTTPASNAAVLALPELLQQSYVVLPLEEKITMLWSFIKNHLKQ------ 318
Query: 310 SKMLVFMATQDMADYHTELL 329
K++VF+A+ A Y E+
Sbjct: 319 -KIIVFVASCKQAKYLYEIF 337
>gi|357627453|gb|EHJ77133.1| hypothetical protein KGM_05863 [Danaus plexippus]
Length = 824
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 247/471 (52%), Gaps = 48/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N T +Q+ +I L G D+L ++TGSGKTLA+ +PI++ L K +R DG+ A+
Sbjct: 69 NYITPTDIQRQAISYALQGKDILGAAKTGSGKTLAFLVPILELL--FCKKWTRLDGVGAL 126
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
+I PTRELA Q E K+ + + GG+ +K E+ R+ + I+IL+ TPGRLL
Sbjct: 127 VISPTRELAYQIYETLRKVGHLHDFSA-GLIIGGQNLKFERKRMDQ-INILICTPGRLLQ 184
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H S+++ LVLDEADR LD G++ + +E L P+ Q++L SAT T +V
Sbjct: 185 HMDENPLFDCSQLQILVLDEADRCLDMGFQTTMNAIIENLP---PKRQTLLFSATQTKSV 241
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L P + + + V P+SL+Q +IV +L L SFI +
Sbjct: 242 KDLARLSLSFPTYVAPHEQANT-------VTPESLQQSYIVCEIDEKLGILWSFIRNHLK 294
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K+LVFMAT Y +L L ++ L+G++ Q +R ++++ F
Sbjct: 295 Q-------KVLVFMATCKQVKYTYDLFCK-LRPGVSLLALYGTLHQEKREKIYEEFCRKS 346
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEV 769
+ VL TD+A+RGLD P V+W++Q+ P + Y+HR GRTAR V +G LL L+P E
Sbjct: 347 NVVLFATDLASRGLDFPRVNWVLQFDCPENVDTYIHRAGRTARGVFGKGEGLLMLLPHEE 406
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
K+V++L +I I++I + D S+L + Q ES +
Sbjct: 407 KIVDDLTKSKIPIKKISV--------------DPSKLQ---------SPQRKIESLLSDN 443
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L +A + + S+V+ + + + IFN + + +A+S L + P +
Sbjct: 444 TELKQTAQRAFVSYVK--SIFLMKNKEIFNIQLLDTDAYARSLGLINPPRI 492
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N T +Q+ +I L G D+L ++TGSGKTLA+ +PI++ L K +R DG+ A+
Sbjct: 69 NYITPTDIQRQAISYALQGKDILGAAKTGSGKTLAFLVPILELL--FCKKWTRLDGVGAL 126
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
+I PTRELA Q E K+ + + GG+ +K E+ R+ + I+IL+ TPGRLL
Sbjct: 127 VISPTRELAYQIYETLRKVGHLHDFSA-GLIIGGQNLKFERKRMDQ-INILICTPGRLLQ 184
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
H S+++ LVLDEADR LD G++ + +E L P+ Q++L SAT T +
Sbjct: 185 HMDENPLFDCSQLQILVLDEADRCLDMGFQTTMNAIIENL---PPKRQTLLFSATQTKS 240
>gi|145349792|ref|XP_001419312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579543|gb|ABO97605.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 481
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 240/465 (51%), Gaps = 46/465 (9%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T +Q+ ++ L G DVL ++TGSGKTLAY +P+I+ L R K R+DG+ A++I
Sbjct: 24 EMTAIQRATLPHALCGRDVLGAAKTGSGKTLAYVVPLIESL--WRKKWGRQDGVGALVIS 81
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA+Q + TK+ T + L GG+ ++ E R+ K ++ILV TPGRLL H
Sbjct: 82 PTRELAIQIFQCLTKVGARHT-MSAGLLIGGKDVQEEANRVNK-MNILVCTPGRLLQHMD 139
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
T ++ LVLDEADR+LD G+ + + ++ L K + Q++L SAT T +V+ L
Sbjct: 140 ETPMFDCVTLQMLVLDEADRMLDLGFTKTLNAIIDNLPKNR---QTLLFSATQTKSVKDL 196
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
A + L++P + + + +H+T P L+Q + ++ L SFI
Sbjct: 197 ARLGLKDPEYL-SVHAESVHST------PPKLQQMVTTCALEKKIEVLWSFI-------K 242
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
+K LVF ++ + E+ + + +HG + Q+ R VF F + K V
Sbjct: 243 THLNAKTLVFFSSCKQVKFVYEIFKR-MRPGVPLQCIHGRLKQARRQGVFYNFCNAKETV 301
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
L TDVA+RGLD P VDW+VQ P Y+HRVGRTAR G LL L P E ++
Sbjct: 302 LFATDVASRGLDFPSVDWVVQADCPEDVATYIHRVGRTARYTAAGKGLLMLTPGESHFMK 361
Query: 774 ELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILH 833
EL+ ++ ++ IKL N + ++ +Q S + + + L
Sbjct: 362 ELEVAKVPLKPIKL----------------------NPKKQSSRIQSSMQGLLSKDSDLK 399
Query: 834 TSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
+ + ++R + Y + + +F+ K I + +A S L +AP
Sbjct: 400 YLSQRAVICYLR--SVYLQKNKKVFDIKSIDMDAYAFSMGLPNAP 442
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 108/174 (62%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ ++ L G DVL ++TGSGKTLAY +P+I+ L R K R+DG+ A++I
Sbjct: 24 EMTAIQRATLPHALCGRDVLGAAKTGSGKTLAYVVPLIESL--WRKKWGRQDGVGALVIS 81
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q + TK+ T + L GG+ ++ E R+ K ++ILV TPGRLL H
Sbjct: 82 PTRELAIQIFQCLTKVGARHT-MSAGLLIGGKDVQEEANRVNK-MNILVCTPGRLLQHMD 139
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T ++ LVLDEADR+LD G+ + + ++ L K + Q++L SAT T
Sbjct: 140 ETPMFDCVTLQMLVLDEADRMLDLGFTKTLNAIIDNLPKNR---QTLLFSATQT 190
>gi|17509811|ref|NP_490989.1| Protein Y23H5B.6 [Caenorhabditis elegans]
gi|351060471|emb|CCD68135.1| Protein Y23H5B.6 [Caenorhabditis elegans]
Length = 732
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 250/493 (50%), Gaps = 56/493 (11%)
Query: 392 YEEFPGIHPFMKKNLNEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
+E+FP + EG+ + T+ T +Q+ +I L G DV+ ++TGSGKTLA I
Sbjct: 78 FEDFP-----LSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVI 132
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMK 508
P+++ L R K S G+ A+II PTRELALQT + + + GG +
Sbjct: 133 PVLEAL--WRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSC-GLVIGGSDVA 189
Query: 509 SEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLE 568
E+ RI GI+I+V TPGRLL H + ++ LVLDEADR+LD G+ + + +
Sbjct: 190 FERNRI-SGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIIN 248
Query: 569 ILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQH 628
L ++ Q++L SAT T V+ L + +P+ + +H S PD+LKQ
Sbjct: 249 NLPAER---QTLLFSATQTRNVKDLCRVCTNDPVFVS------VHENA-SAATPDNLKQS 298
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFF 688
+++ + ++ AL SFI + K LVF+++ A + TE S L +
Sbjct: 299 YVIVEEEHKINALWSFI-------EAHRKKKSLVFVSSCKQARFLTEAFSQ-LRPGLPVM 350
Query: 689 KLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRV 748
L G+M+Q +R E F F K+ VLI TDVA+RGLD +DW++Q P+ DY+HRV
Sbjct: 351 GLWGTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRV 410
Query: 749 GRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLA 807
GR+AR+ G+SLL + PS E ++ +L+ I IEE+K+ + + VK+ L+
Sbjct: 411 GRSARMDDSGNSLLMVSPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILA--- 467
Query: 808 DGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGH 867
+ + L A K +++R + Y+ + +F+ + I
Sbjct: 468 --------------------ESQELKEYAQKSIVAYLR--SIYTMKDKKVFDVEAIDAAA 505
Query: 868 FAKSFALRDAPSV 880
A SF L P V
Sbjct: 506 LADSFGLVSVPRV 518
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+ T+ T +Q+ +I L G DV+ ++TGSGKTLA IP+++ L R K S G+ A+
Sbjct: 95 DYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEAL--WRAKWSPDYGLGAL 152
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELALQT + + + GG + E+ RI GI+I+V TPGRLL
Sbjct: 153 IISPTRELALQTFSTINAVGAHHGFSC-GLVIGGSDVAFERNRI-SGINIIVCTPGRLLQ 210
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H + ++ LVLDEADR+LD G+ + + + L ++ Q++L SAT T
Sbjct: 211 HMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAER---QTLLFSATQT 264
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADR+LD G+ + + + L ++ Q++L SAT T V+ L + +P+ +
Sbjct: 226 LVLDEADRMLDMGFSKQLNSIINNLPAER---QTLLFSATQTRNVKDLCRVCTNDPVFV- 281
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
+H S PD+LKQ +++ + ++ AL SFI + K LVF++
Sbjct: 282 -----SVHENA-SAATPDNLKQSYVIVEEEHKINALWSFI-------EAHRKKKSLVFVS 328
Query: 318 TQDMADYHTELLS 330
+ A + TE S
Sbjct: 329 SCKQARFLTEAFS 341
>gi|356553180|ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
max]
Length = 743
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 234/417 (56%), Gaps = 27/417 (6%)
Query: 369 PDIP-NVPTRRLKPVSEALFAPTS-YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
P +P N P RL+ + + +A S +++FP + K L E +T +Q+ S+
Sbjct: 43 PRLPKNSPVGRLEDNTYSRYAGASRFDQFP-LSKKTKDALRES-KFVAMTDIQRASLPHA 100
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G D+L ++TGSGKTLA+ IP+++KL R + +DG+ ++II PTRELA Q ++
Sbjct: 101 LCGRDILGAAKTGSGKTLAFIIPVLEKL--YRERWGPEDGVGSIIISPTRELAGQLFDVL 158
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+ K + + G + + EK R+ + ++IL+ TPGRLL H T S+++ L
Sbjct: 159 KVVGKHHNFSAGLLIGGRKDVDMEKERVNE-LNILICTPGRLLQHMDETPNFDCSQMQVL 217
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDA 606
VLDEADRILD G+++++ + L K++ Q++L SAT T ++Q LA ++L++P
Sbjct: 218 VLDEADRILDSGFKKELNAIISQLPKRR---QTLLFSATQTKSIQDLARLSLKDP----- 269
Query: 607 ADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMAT 666
+ +H + + P LKQ ++ P + +L L SFI Q SK LVF+++
Sbjct: 270 -EYLSVHEESVT-STPTLLKQIVMIVPLEQKLDMLWSFIKTHLQ-------SKTLVFLSS 320
Query: 667 QDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL 726
+ E L I LHG M Q R ++ F K VL TDVAARGLD
Sbjct: 321 CKQVKFVFEAFKK-LHPGIPLKCLHGRMKQERRMAIYSEF-CEKRSVLFSTDVAARGLDF 378
Query: 727 -PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRI 782
VDW+VQ P + Y+HRVGRTAR +G S+LFL+PSE++++E+L+ ++ +
Sbjct: 379 NKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPV 435
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ S+ L G D+L ++TGSGKTLA+ IP+++KL R + +DG+ ++II P
Sbjct: 89 MTDIQRASLPHALCGRDILGAAKTGSGKTLAFIIPVLEKL--YRERWGPEDGVGSIIISP 146
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q ++ + K + + G + + EK R+ + ++IL+ TPGRLL H
Sbjct: 147 TRELAGQLFDVLKVVGKHHNFSAGLLIGGRKDVDMEKERVNE-LNILICTPGRLLQHMDE 205
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S+++ LVLDEADRILD G+++++ + L K++ Q++L SAT T
Sbjct: 206 TPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRR---QTLLFSATQT 255
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S+++ LVLDEADRILD G+++++ + L K++ Q++L S
Sbjct: 195 TPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRR---QTLLFS 251
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T ++Q LA ++L++P + +H + + P LKQ ++ P + +L L S
Sbjct: 252 ATQTKSIQDLARLSLKDP------EYLSVHEESVT-STPTLLKQIVMIVPLEQKLDMLWS 304
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q SK LVF+++
Sbjct: 305 FIKTHLQ-------SKTLVFLSS 320
>gi|330040296|ref|XP_003239842.1| RNA-dependent helicase [Cryptomonas paramecium]
gi|327206767|gb|AEA38944.1| RNA-dependent helicase [Cryptomonas paramecium]
Length = 478
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 251/465 (53%), Gaps = 50/465 (10%)
Query: 413 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T +T +Q L I + G D+L +QTGSGKT+A+ +P+I+ + + K + + + +I+
Sbjct: 61 THMTNIQSLGIPLQICGFDILGSAQTGSGKTIAFCVPLIEFVYTV--KWANFNSLAGIIL 118
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTREL LQ + L + L GG K+E +I+KG I++ATPGRLLDH
Sbjct: 119 TPTRELTLQNYCVVKDLLALHSQSC-GILMGGTNKKTEIEKIKKGQPIIIATPGRLLDHL 177
Query: 533 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
++ L++DEADR L+ G+E +I + + I K++ Q+IL SAT T +V+
Sbjct: 178 TSKSNFPIKFLQILIIDEADRCLEAGFEEEIYKIISIFPKKR---QTILFSATQTRSVES 234
Query: 593 LAGMTL-QNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 651
L+ ++ PI + I N ++ VIP ++Q+F+V P+ + ++L SF+
Sbjct: 235 LSVISFVTKPIYLS------IQNGLNTNVIPK-IEQNFLVCKPEYKFISLVSFL------ 281
Query: 652 VNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKS 711
++E K++VF + + + + +LS +LG I HG Q +RT VF F K
Sbjct: 282 -KKNENKKIVVFFNSCNEVRFFS-ILSKLLG--IPVLNFHGKQKQVKRTSVFFEFCKKKK 337
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVK 770
+L CTDVA+RGLD+P +DW++ + AP +Y HR+GRT R V G SL+FL+PSE+
Sbjct: 338 SILFCTDVASRGLDIPSIDWVIHFDAPLEIRNYFHRIGRTCRGVETVGKSLIFLLPSEIN 397
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
+ L+ +I++ E K ++ +NL + +L D V +
Sbjct: 398 FLILLKKNKIKVSEYKFQN--ENLFVM-----CCKLID----------------IVKKNN 434
Query: 831 ILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
L + + + S++ Y++ + L+ IF+ K++ L A SF LR
Sbjct: 435 YLFELSKEAFKSFLNSYSNST--LKEIFDVKKVDLKSLANSFGLR 477
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 4 TQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 63
T +T +Q L I + G D+L +QTGSGKT+A+ +P+I+ + + K + + + +I+
Sbjct: 61 THMTNIQSLGIPLQICGFDILGSAQTGSGKTIAFCVPLIEFVYTV--KWANFNSLAGIIL 118
Query: 64 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 123
PTREL LQ + L + L GG K+E +I+KG I++ATPGRLLDH
Sbjct: 119 TPTRELTLQNYCVVKDLLALHSQSC-GILMGGTNKKTEIEKIKKGQPIIIATPGRLLDHL 177
Query: 124 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
++ L++DEADR L+ G+E +I + + I K++ Q+IL SAT T
Sbjct: 178 TSKSNFPIKFLQILIIDEADRCLEAGFEEEIYKIISIFPKKR---QTILFSATQT 229
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 18/132 (13%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTL-QNPIQI 256
L++DEADR L+ G+E +I + + I K++ Q++L SAT T +V+ L+ ++ PI +
Sbjct: 191 LIIDEADRCLEAGFEEEIYKIISIFPKKR---QTILFSATQTRSVESLSVISFVTKPIYL 247
Query: 257 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 316
I N ++ VIP ++Q+F+V P+ + ++L SF+ ++E K++VF
Sbjct: 248 ------SIQNGLNTNVIPK-IEQNFLVCKPEYKFISLVSFL-------KKNENKKIVVFF 293
Query: 317 ATQDMADYHTEL 328
+ + + + L
Sbjct: 294 NSCNEVRFFSIL 305
>gi|397590755|gb|EJK55144.1| hypothetical protein THAOC_25148 [Thalassiosira oceanica]
Length = 666
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 262/540 (48%), Gaps = 54/540 (10%)
Query: 379 LKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQT 438
++ EA FA P I F+ K N T VQ +I L DV VR+ T
Sbjct: 9 VREAPEASFASIQPPLSPAILEFLSK---PPYNFPSPTPVQDTTIPLFLTHHDVFVRAVT 65
Query: 439 GSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVP 498
GSGKTLA+ IP+++ + R + + + I A+I+ PTRELA QT + LC+S P
Sbjct: 66 GSGKTLAFLIPVVEMILR-RTVMLKSNQIGALILEPTRELARQTFGVCRDLCQSCGINEP 124
Query: 499 SWLTGGEKMKSEK--------ARIRKGIS-ILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
L GG K A+ K S I+V TPGR+ D + + S++E L+LD
Sbjct: 125 LLLVGGGGSKGASVSAVSYDLAQFAKLQSDIIVGTPGRVEDVLTRYDNIDVSEMEVLILD 184
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMT-LQNPIQIDAA- 607
E+D +LD G+E + L L + + ++ L SAT T V+RL + ++NP+ +D A
Sbjct: 185 ESDVLLDMGFEVTLTSILSRLPRMR---RTGLFSATNTSGVKRLCVKSGMRNPVVVDVAI 241
Query: 608 ----DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVF 663
+ ++ P SL +F+V+P +L L +F+ N+ E K+++F
Sbjct: 242 NSEQNEHEMQAKDQKQATPSSLTNYFLVSPLDEKLSRLLAFL-------NQHAEEKVIIF 294
Query: 664 MATQDMADYHTELLSTVL--GENIAFFKLHGSMSQSERTEVFKTFRSVKSG-VLICTDVA 720
T +Y++ +L + + AF LHG + Q R + FR +G L+CTDVA
Sbjct: 295 FLTCACVEYYSTVLQKLRPPAKGYAFESLHGKLVQKRREKAMGRFRESSNGSALLCTDVA 354
Query: 721 ARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRI 780
ARGLDLP +DW +Q+ AP + YVHRVGR+AR G G+SL+FL E ++ L+ R++
Sbjct: 355 ARGLDLPDIDWTIQFDAPVDPSSYVHRVGRSARAGRSGNSLVFLTRKEEAYIDFLKLRKV 414
Query: 781 RIEEIKLKDCLQ-------NLLSVKM------EGDLSRLADGN--VETAATALQM----- 820
+ E+ + + S K+ S+ AD + A + L++
Sbjct: 415 PVREMPDTEVCKPPSAEDDGATSTKIVETTTKRKHASKPADERQIMSAAGSDLRVKDVLP 474
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
V + + K YTS++R Y + IF F + LG A SF+L P +
Sbjct: 475 DIRKLVCDDRDVLEKGTKAYTSYIRAYKEHHCGF--IFRFASLDLGVLATSFSLLRLPKM 532
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 145/337 (43%), Gaps = 75/337 (22%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N T VQ +I L DV VR+ TGSGKTLA+ IP+++ + R + + + I A+
Sbjct: 38 NFPSPTPVQDTTIPLFLTHHDVFVRAVTGSGKTLAFLIPVVEMILR-RTVMLKSNQIGAL 96
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK--------ARIRKGIS-IL 112
I+ PTRELA QT + LC+S P L GG K A+ K S I+
Sbjct: 97 ILEPTRELARQTFGVCRDLCQSCGINEPLLLVGGGGSKGASVSAVSYDLAQFAKLQSDII 156
Query: 113 VATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSIL 172
V TPGR+ D + + S++E L+LDE+D +LD G+E + L L + + ++ L
Sbjct: 157 VGTPGRVEDVLTRYDNIDVSEMEVLILDESDVLLDMGFEVTLTSILSRLPRMR---RTGL 213
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
SAT T S V+ L + R
Sbjct: 214 FSATNT--------------SGVKRLCVKSGMR--------------------------- 232
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
P V +A + QN ++ A D P SL +F+V+P +L
Sbjct: 233 ------NPVVVDVAINSEQNEHEMQAKDQKQ--------ATPSSLTNYFLVSPLDEKLSR 278
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELL 329
L +F+ N+ E K+++F T +Y++ +L
Sbjct: 279 LLAFL-------NQHAEEKVIIFFLTCACVEYYSTVL 308
>gi|50290649|ref|XP_447757.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609416|sp|Q6FPT7.1|DBP4_CANGA RecName: Full=ATP-dependent RNA helicase DBP4
gi|49527068|emb|CAG60704.1| unnamed protein product [Candida glabrata]
Length = 765
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 245/493 (49%), Gaps = 47/493 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K LNE I ++T +Q+ SI L G DV ++TGSGKTLA+ +P+++KL R + +
Sbjct: 54 KGLNEASFI-KMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLEKL--YRERWTE 110
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+II PTRELA+Q E+ K+ S T + GG+ + E RI K I+IL+
Sbjct: 111 FDGLGALIISPTRELAMQIYEVLVKIG-SHTQFSAGLVIGGKDVNFELERIAK-INILIG 168
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+L H L S ++ LVLDEADR LD G+++ + I+ P Q++L S
Sbjct: 169 TPGRILQHMDQAVGLNTSNLQMLVLDEADRCLDMGFQKTLDA---IVGNLPPDRQTLLFS 225
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + ++ LA ++L + +I DS++ D P +L+Q +I+ +L L S
Sbjct: 226 ATQSQSISDLARLSLTDYKKIGTIDSSE-----DGPATPKTLQQSYIIADLADKLDVLYS 280
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + +KM+VF ++ + E + I+ LHG Q RTE
Sbjct: 281 FIKSHLK-------TKMIVFFSSSKQVHFVYETFRK-MQPGISLLHLHGRQKQRARTETL 332
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TDV ARG+D P VDW++Q P Y+HRVGR AR G +G SL+
Sbjct: 333 DKFFRAQQVCLFATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRAARYGKKGRSLII 392
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFE 823
L P E + + ++I + +L + + Q+ +
Sbjct: 393 LTPQEEAFLTRMAAKKI---------------------EPGKLTIKQSKKKSIKPQL--Q 429
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-IS 882
S + + L K + S+V+ + Y + + +F F ++ FA S L AP + I
Sbjct: 430 SLLFKDPELKYLGQKAFISYVK--SIYIQKDKEVFKFDELPTEEFANSLGLPGAPRIKIK 487
Query: 883 GIGKPKNKEELKN 895
G+ + ++LKN
Sbjct: 488 GMKAIEQAKKLKN 500
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G DV ++TGSGKTLA+ +P+++KL R + + DG+ A+II
Sbjct: 63 KMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLEKL--YRERWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ S T + GG+ + E RI K I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLVKIG-SHTQFSAGLVIGGKDVNFELERIAK-INILIGTPGRILQHMD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFQKTLD---AIVGNLPPDRQTLLFSAT 227
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT + ++ LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFQKTLDA---IVGNLPPDRQTLLFSATQSQSISDLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + +I DS++ D P +L+Q +I+ +L L SFI +
Sbjct: 240 LTDYKKIGTIDSSE-----DGPATPKTLQQSYIIADLADKLDVLYSFIKSHLK------- 287
Query: 310 SKMLVFMAT 318
+KM+VF ++
Sbjct: 288 TKMIVFFSS 296
>gi|224101199|ref|XP_002312182.1| predicted protein [Populus trichocarpa]
gi|222852002|gb|EEE89549.1| predicted protein [Populus trichocarpa]
Length = 592
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 246/491 (50%), Gaps = 50/491 (10%)
Query: 399 HPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMR 458
P ++ N G + T VQ +I + DV V + TGSGKTLA+ +P+++ L+ R
Sbjct: 27 EPVLEALTNSGFDY--CTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILR--R 82
Query: 459 PKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-G 517
+ + +II PTREL+ Q + + + L GG +K++ I + G
Sbjct: 83 SSSPKPHQVMGIIISPTRELSSQIYNVAQPFIATLSNFKSMLLVGGMDVKADVKMIEEEG 142
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
++L+ TPGRL D + L F +E L+LDEADR+LD G+++ + + L K +
Sbjct: 143 ANLLIGTPGRLFDIMDRVDVLDFRNLEVLILDEADRLLDMGFQKQLNSIISRLPKLR--- 199
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDA-ADSTDIHNTTDSLVI-----PDSLKQHFIV 631
++ L SAT T AV+ L+ L+NP++++ A++ ++N+ + P L ++
Sbjct: 200 RTGLFSATQTEAVEELSKAGLRNPVKVEVRAETKSLNNSVSGQQLAPSKTPSGLLLEYLE 259
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS--TVLGENIAFFK 689
+ L ++ +++ K++++ T DY +L TVL +
Sbjct: 260 CEADKKPSQLVDLLV-------KNKSKKIIIYFMTCACVDYWGVVLPRLTVLN-GFSLIS 311
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q+ R + +F S+ SG+L+CTDVAARGLD+P VD IVQY P +VHRVG
Sbjct: 312 LHGKMKQTAREKALTSFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVG 371
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
RTAR+G +GSS++FL+P E VE L+ RR+ + E K D +++
Sbjct: 372 RTARLGRQGSSIVFLLPKEEAYVEFLRIRRVPLLERKCADDAPDVVP------------- 418
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
SA + + + + + S++R Y + +IF +K++ +G
Sbjct: 419 -----------QIRSAAKKDRDVMEKGLRAFVSYIRAYKEHH--CSYIFRWKELEVGKLG 465
Query: 870 KSFALRDAPSV 880
+ L PS+
Sbjct: 466 MGYGLLQLPSM 476
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 7 TTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPT 66
T VQ +I + DV V + TGSGKTLA+ +P+++ L+ R + + +II PT
Sbjct: 42 TPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILR--RSSSPKPHQVMGIIISPT 99
Query: 67 RELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCKH 125
REL+ Q + + + L GG +K++ I + G ++L+ TPGRL D
Sbjct: 100 RELSSQIYNVAQPFIATLSNFKSMLLVGGMDVKADVKMIEEEGANLLIGTPGRLFDIMDR 159
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
+ L F +E L+LDEADR+LD G+++ + + L K + ++ L SAT T A
Sbjct: 160 VDVLDFRNLEVLILDEADRLLDMGFQKQLNSIISRLPKLR---RTGLFSATQTEA 211
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
+ L F +E L+LDEADR+LD G+++ + + L K + ++ L SAT T AV+ L
Sbjct: 159 RVDVLDFRNLEVLILDEADRLLDMGFQKQLNSIISRLPKLR---RTGLFSATQTEAVEEL 215
Query: 246 AGMTLQNPIQIDA-ADSTDIHNT 267
+ L+NP++++ A++ ++N+
Sbjct: 216 SKAGLRNPVKVEVRAETKSLNNS 238
>gi|7716784|gb|AAF68542.1|AF252759_1 helicase pitchoune [Drosophila simulans]
Length = 375
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 226/413 (54%), Gaps = 48/413 (11%)
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 584 ATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T ++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L
Sbjct: 122 ATQTARIEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLF 174
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ + K++VF ++ YH EL + + ++ +HG Q++RT
Sbjct: 175 TFL-------KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTT 224
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSL 761
F F + +SG+L+ TDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +L
Sbjct: 225 FFQFCNAESGILLXTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHAL 284
Query: 762 LFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
L + P E+ + L+ ++ + E E ++AD +Q+
Sbjct: 285 LLMRPEELGFLRYLKAAKVPLNE--------------FEFSWQKIAD---------IQLQ 321
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
E + + L+ SA + + S+VR Y S+ L+ IFN + L AKSF
Sbjct: 322 LEKLIAKNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGF 372
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 14/194 (7%)
Query: 55 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 114
++G +II PTREL++QT + +L + GG + E ++ KGI+ILVA
Sbjct: 6 RNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVA 64
Query: 115 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
TPGRLLDH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L S
Sbjct: 65 TPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFS 121
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQ 225
AT T A LK + V D D L+QGY E+ + LKK
Sbjct: 122 ATQT-ARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKN 180
Query: 226 KPQFQSVLLSATLT 239
+ + V S+ ++
Sbjct: 181 RKKKVMVFFSSCMS 194
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 81 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 137
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 138 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 183
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 184 KVMVFFSSCMSVKYHHELFN 203
>gi|255087136|ref|XP_002505491.1| predicted protein [Micromonas sp. RCC299]
gi|226520761|gb|ACO66749.1| predicted protein [Micromonas sp. RCC299]
Length = 529
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 223/484 (46%), Gaps = 47/484 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS-RKDGIYA 469
+ T VQ +I + DV V + TGSGKTLA+ +P+++ L + S RK + A
Sbjct: 21 GFERATPVQAAAIGLLAGNKDVAVEACTGSGKTLAFVLPMVEILARASKEQSFRKHHVGA 80
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISI--LVATPGR 527
V++ PTRELA Q ++ + + P L G +E R L+ TPGR
Sbjct: 81 VVVSPTRELARQIFDVAAPFMATLPDMAPPMLLVGGTDVNEDVRAFAAAGAAALIGTPGR 140
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
L D + + E LVLDEADR+L G+ R I + L KQ+ ++ L SAT T
Sbjct: 141 LDDLMLRSNAFDAKRCELLVLDEADRLLSMGFARAINAIIARLPKQR---RTGLFSATQT 197
Query: 588 PAVQRLAGMTLQNPIQIDAADSTD-------------IHNTTDSLVIPDSLKQHFIVTPP 634
V+ LA L+NP+++ DS ++ +P LK + V
Sbjct: 198 DEVEELARAGLRNPVRVTVRDSAAQAAANAAKASGLPANSAAARGKLPAQLKLLYKVCKV 257
Query: 635 KLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS----TVLGENIAFFKL 690
RL L F+ E+ + K +V+ T DY + G+++ L
Sbjct: 258 DERLWRLREFL-------KENADKKTIVYFLTCACVDYFATAMCDGAPASPGDDVDVVAL 310
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG M QS+R + F + G L+CTDVAARGLD+P VDW+VQ+ AP +VHRVGR
Sbjct: 311 HGKMKQSQREQALGRFAAGAGGCLLCTDVAARGLDIPGVDWVVQFDAPQDPAAFVHRVGR 370
Query: 751 TARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGN 810
TAR+G +GS+LLFL P E VE L+ R I + E EG AD
Sbjct: 371 TARMGRDGSALLFLSPHESSYVEFLRVRHIHLRE---------------EGSDEDAADTE 415
Query: 811 VETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAK 870
L + + + + + S++R Y + R IF FK++ L A+
Sbjct: 416 AVEGGNRLCDELRARSEKNREAMEKGVRAFVSYLRGYKEHH--CRFIFRFKELELARLAR 473
Query: 871 SFAL 874
S L
Sbjct: 474 SLGL 477
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 6/180 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS-RKDGIYA 60
+ T VQ +I + DV V + TGSGKTLA+ +P+++ L + S RK + A
Sbjct: 21 GFERATPVQAAAIGLLAGNKDVAVEACTGSGKTLAFVLPMVEILARASKEQSFRKHHVGA 80
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISI--LVATPGR 118
V++ PTRELA Q ++ + + P L G +E R L+ TPGR
Sbjct: 81 VVVSPTRELARQIFDVAAPFMATLPDMAPPMLLVGGTDVNEDVRAFAAAGAAALIGTPGR 140
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L D + + E LVLDEADR+L G+ R I + L KQ+ ++ L SAT T
Sbjct: 141 LDDLMLRSNAFDAKRCELLVLDEADRLLSMGFARAINAIIARLPKQR---RTGLFSATQT 197
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 194 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNP 253
+ E LVLDEADR+L G+ R I + L KQ+ ++ L SAT T V+ LA L+NP
Sbjct: 155 RCELLVLDEADRLLSMGFARAINAIIARLPKQR---RTGLFSATQTDEVEELARAGLRNP 211
Query: 254 IQIDAADSTD-------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+++ DS ++ +P LK + V RL L F+
Sbjct: 212 VRVTVRDSAAQAAANAAKASGLPANSAAARGKLPAQLKLLYKVCKVDERLWRLREFL--- 268
Query: 301 CQNVNEDEESKMLVFMATQDMADY 324
E+ + K +V+ T DY
Sbjct: 269 ----KENADKKTIVYFLTCACVDY 288
>gi|328871810|gb|EGG20180.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1288
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 237/471 (50%), Gaps = 40/471 (8%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ +I L DVLV + TGSGKTL++ IPII+ L + +P+ K + AVI+ P
Sbjct: 592 MTPVQSATIPLFLSNKDVLVEACTGSGKTLSFIIPIIEILLKKQPEELTKHQVLAVIVTP 651
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 533
TRELA+Q I + I L GG ++ + + K G +++VATPGRL D
Sbjct: 652 TRELAVQIFGILEQFVHGLDHIKRLLLIGGTEVYEDVQKFNKDGGNVIVATPGRLEDVLS 711
Query: 534 HTE-TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQR 592
E +K + E L+LDEADR+LD G++ + L+ L KQ+ ++ L SAT T ++
Sbjct: 712 RVERNMKLKEFEMLILDEADRLLDMGFDTALNAVLDRLPKQR---RTGLFSATQTTELKE 768
Query: 593 LAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNV 652
LA M ++NP+++ A T IP +L+ + + P + LA F+ +N+
Sbjct: 769 LARMGMRNPVKVSVA--VQQKGTNQVSAIPSTLENRYTMLEPSEKFGVLADFM---DKNM 823
Query: 653 NEDEESKMLVFMATQDMADYHTELLSTV--LGENIA-FFKLHGSMSQSERTEVFKTFRSV 709
N SK++V+ T DY + L++ + + + F LHG + R VF F +
Sbjct: 824 NN---SKIIVYFLTCADVDYFSSLMTKMSQFKDRVKDIFSLHGKVPHERRKFVFDKFSAK 880
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEV 769
SGV+ TD+ +RG+D P VDW++QY AP ++HR+GRTAR+G G+++L+L +E
Sbjct: 881 DSGVIFVTDLVSRGIDFPSVDWVIQYDAPQDPKTFIHRIGRTARMGRTGNAMLYLSKAED 940
Query: 770 KLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQ 829
+E ++ R++ + E D L A +L
Sbjct: 941 DYLEFMRLRKVSMVETPKPDTL----------------------ALEHYTKEMRRVILSN 978
Query: 830 KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + + + S+ R Y ++ +IF +++ G A + L P +
Sbjct: 979 RQIMERSIVAFVSYARAYKEHT--CSYIFVTRKLDFGSLAHGYGLLRMPKM 1027
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I L DVLV + TGSGKTL++ IPII+ L + +P+ K + AVI+ P
Sbjct: 592 MTPVQSATIPLFLSNKDVLVEACTGSGKTLSFIIPIIEILLKKQPEELTKHQVLAVIVTP 651
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRLLDHCK 124
TRELA+Q I + I L GG ++ + + K G +++VATPGRL D
Sbjct: 652 TRELAVQIFGILEQFVHGLDHIKRLLLIGGTEVYEDVQKFNKDGGNVIVATPGRLEDVLS 711
Query: 125 HTE-TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
E +K + E L+LDEADR+LD G++ + L+ L KQ+ ++ L SAT T
Sbjct: 712 RVERNMKLKEFEMLILDEADRLLDMGFDTALNAVLDRLPKQR---RTGLFSATQT 763
>gi|46122619|ref|XP_385863.1| hypothetical protein FG05687.1 [Gibberella zeae PH-1]
gi|91206546|sp|Q4IAS1.1|DBP4_GIBZE RecName: Full=ATP-dependent RNA helicase DBP4
Length = 793
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 236/477 (49%), Gaps = 51/477 (10%)
Query: 408 EGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
EG+ I +T VQ ++ L G D+L ++TGSGKTLA+ IP+++KL R + +
Sbjct: 64 EGLEIAHFQTLTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIPVLEKL--YRAQWTEF 121
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
DG+ A+II PTRELA Q E+ K+ ++ + GG+ +K E R+ + ++ILV T
Sbjct: 122 DGLGALIISPTRELAAQIFEVLRKVGTKHSFSA-GLVIGGKSLKEEAERLDR-MNILVCT 179
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 584
PGR+L H T + ++ LVLDEADRI+D G++ + +E L +++ Q+++ SA
Sbjct: 180 PGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRER---QTLMFSA 236
Query: 585 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T + V LA ++L++P + +H S P +L+QH+IVTP +L L F
Sbjct: 237 TQSKKVSDLARLSLKDP------EYVSVHEAAVS-ATPTNLQQHYIVTPLTEKLDTLYGF 289
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
I + SK++VF+++ + E L I LHG Q R E+
Sbjct: 290 IKANLK-------SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQKQGARMEITS 341
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
F + K L TDV ARG+D P VDW++Q P Y+HRVGRTAR G ++LFL
Sbjct: 342 RFTAAKQTCLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYESNGRAVLFL 401
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
PSE E +++ +++I ++ K D +S
Sbjct: 402 DPSE----EPGMLKKLELKKIPIQKVNVKEKKKKSIKD------------------QLQS 439
Query: 825 AVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L K + S+ R + KD +F F ++ L FA S L P V
Sbjct: 440 MCFQNPDLKYLGQKAFISYSRSIHLQRDKD---VFKFNKLDLDGFAASLGLPGTPQV 493
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ ++ L G D+L ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 74 LTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIPVLEKL--YRAQWTEFDGLGALIISP 131
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q E+ K+ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 132 TRELAAQIFEVLRKVGTKHSFSA-GLVIGGKSLKEEAERLDR-MNILVCTPGRMLQHFDQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L +++ Q+++ SAT
Sbjct: 190 TAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRER---QTLMFSAT 237
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + +E L +++ Q+++ S
Sbjct: 179 TPGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRER---QTLMFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L++P + +H S P +L+QH+IVTP +L L
Sbjct: 236 ATQSKKVSDLARLSLKDP------EYVSVHEAAVS-ATPTNLQQHYIVTPLTEKLDTLYG 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 289 FIKANLK-------SKIIVFLSS 304
>gi|156544612|ref|XP_001603959.1| PREDICTED: probable ATP-dependent RNA helicase DDX55 homolog
[Nasonia vitripennis]
Length = 591
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 257/492 (52%), Gaps = 51/492 (10%)
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
++K L E + ++T VQ SI +L G DV + TGSGKTLA+ IP+++ L+ K
Sbjct: 17 VRKTLKE-LKFLKMTPVQAASIPLLLQGKDVAAEAVTGSGKTLAFLIPLLELLRRREEKW 75
Query: 462 SRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISIL 521
+K I A++I PTRELA Q ++ K + L GG +K + ++RKG +I+
Sbjct: 76 -KKFEIGAIVISPTRELATQISQVLAKFLEKLPVFKQVLLVGGSTVKDDVEQLRKGCNII 134
Query: 522 VATPGRLLD---HCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
+ATPGRL D +CK K +E LVLDEADR+LD G+ I L L + +
Sbjct: 135 IATPGRLEDILTNCKEINLAGAIKSLELLVLDEADRLLDLGFYATINTILRYLPRLR--- 191
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLR 637
++ L SAT T +++L L+NP + +S D+ P L + + P +
Sbjct: 192 RTGLFSATQTKELEQLIRAGLRNPAIVTVQESDDVST-------PLHLSNFYSIVDPDKK 244
Query: 638 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQS 697
+ +FI K N+ K ++F +T +Y +E++ +L + +HG M ++
Sbjct: 245 IAYTINFIKSKGVNM------KYMIFFSTCACVEYFSEVMKAMLN-STKVLAIHGKM-KN 296
Query: 698 ERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
+R ++F+ F+++++G+LICTDV ARG+D+P VDW++QY PSS++ +VHR GRTAR+G E
Sbjct: 297 KRHKIFEEFQALENGLLICTDVMARGIDIPEVDWVIQYDPPSSASSFVHRCGRTARIGKE 356
Query: 758 GSSLLFLIPSEVKLVEELQNRRIRIEEIKLKD-CLQNLLSVKMEGDLSRLADGNVETAAT 816
G++LL L +E V+ ++ R R+E +L D CL VE
Sbjct: 357 GNALLLLSETEDAYVDFIK-RNQRVEMKQLADQCLDPSF---------------VEECLK 400
Query: 817 ALQMSFESAVLQQ--KILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
++ LQQ +++ A + S+++ Y + L I K + LG F L
Sbjct: 401 CMRQ------LQQEDRLVFDKANRAVVSYIQSYQKHECSL--ILRLKDLDLGRVFMGFGL 452
Query: 875 RDAPSVISGIGK 886
AP + G+
Sbjct: 453 LKAPRMPESKGR 464
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 8/182 (4%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++T VQ SI +L G DV + TGSGKTLA+ IP+++ L+ K +K I A
Sbjct: 24 LKFLKMTPVQAASIPLLLQGKDVAAEAVTGSGKTLAFLIPLLELLRRREEKW-KKFEIGA 82
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA Q ++ K + L GG +K + ++RKG +I++ATPGRL
Sbjct: 83 IVISPTRELATQISQVLAKFLEKLPVFKQVLLVGGSTVKDDVEQLRKGCNIIIATPGRLE 142
Query: 121 D---HCKHTETLKFSK-VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
D +CK K +E LVLDEADR+LD G+ I L L + + ++ L SAT
Sbjct: 143 DILTNCKEINLAGAIKSLELLVLDEADRLLDLGFYATINTILRYLPRLR---RTGLFSAT 199
Query: 177 LT 178
T
Sbjct: 200 QT 201
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 195 VEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPI 254
+E LVLDEADR+LD G+ I L L + + ++ L SAT T +++L L+NP
Sbjct: 160 LELLVLDEADRLLDLGFYATINTILRYLPRLR---RTGLFSATQTKELEQLIRAGLRNPA 216
Query: 255 QIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLV 314
+ +S D+ P L + + P ++ +FI K N+ K ++
Sbjct: 217 IVTVQESDDVST-------PLHLSNFYSIVDPDKKIAYTINFIKSKGVNM------KYMI 263
Query: 315 FMATQDMADYHTELL 329
F +T +Y +E++
Sbjct: 264 FFSTCACVEYFSEVM 278
>gi|432853428|ref|XP_004067702.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Oryzias
latipes]
Length = 834
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 245/468 (52%), Gaps = 48/468 (10%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L R + S DG+ A+II
Sbjct: 97 QPTEIQRQTIGLALRGRDVLGAAKTGSGKTLAFLIPVLECL--YRHQWSSMDGLGALIIS 154
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA QT E+ K+ K+ + + GG+ +K+E RI + +I+V TPGRLL H
Sbjct: 155 PTRELAYQTFEVLRKVGKNHEFSA-GLVIGGKDLKTEAERIPR-TNIVVCTPGRLLQHMD 212
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
T S + LVLDEADRILD G+ + +E L + + Q++L SAT T +V+ L
Sbjct: 213 QTACFHASGLLMLVLDEADRILDMGFADTLNAIVENLPRTR---QTLLFSATQTKSVKDL 269
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
A ++L++P + D P SL+Q ++V ++ L SFI G
Sbjct: 270 ARLSLKDPEYVWVHDKA-------RFSTPASLEQSYVVCELHQKVDLLFSFIRGHLTK-- 320
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
K++VF A Y + L + LHG Q +R EV+ F ++ V
Sbjct: 321 -----KIIVFFACCKQVQYLFRVFCR-LRPGMPVLALHGRQPQVKRVEVYNDFVRKQNAV 374
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK-LV 772
L TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR G +LL L+PSE + +V
Sbjct: 375 LFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGGEALLLLLPSEAEAMV 434
Query: 773 EELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKIL 832
+LQ +++ I +I++ N E + +Q E+ + Q+K
Sbjct: 435 AQLQEKKVPINQIQV----------------------NPEKLQS-IQQKLEAFLAQEKEQ 471
Query: 833 HTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
A + + S++R + + + +F+ ++++ +A S L AP V
Sbjct: 472 KERAQRCFVSYLR--SVHLMKNKAVFDVSKLNINQYAHSLGLAVAPRV 517
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L R + S DG+ A+II
Sbjct: 97 QPTEIQRQTIGLALRGRDVLGAAKTGSGKTLAFLIPVLECL--YRHQWSSMDGLGALIIS 154
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA QT E+ K+ K+ + + GG+ +K+E RI + +I+V TPGRLL H
Sbjct: 155 PTRELAYQTFEVLRKVGKNHEFSA-GLVIGGKDLKTEAERIPR-TNIVVCTPGRLLQHMD 212
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S + LVLDEADRILD G+ + +E L + + Q++L SAT T
Sbjct: 213 QTACFHASGLLMLVLDEADRILDMGFADTLNAIVENLPRTR---QTLLFSATQT 263
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 198 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQID 257
LVLDEADRILD G+ + +E L + + Q++L SAT T +V+ LA ++L++P +
Sbjct: 225 LVLDEADRILDMGFADTLNAIVENLPRTR---QTLLFSATQTKSVKDLARLSLKDPEYVW 281
Query: 258 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 317
D P SL+Q ++V ++ L SFI G K++VF A
Sbjct: 282 VHDKA-------RFSTPASLEQSYVVCELHQKVDLLFSFIRGHLTK-------KIIVFFA 327
Query: 318 TQDMADY 324
Y
Sbjct: 328 CCKQVQY 334
>gi|112419200|gb|AAI22412.1| Ddx10 protein [Danio rerio]
Length = 439
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 212/384 (55%), Gaps = 27/384 (7%)
Query: 400 PFMKKNLNEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQE 456
P KK L +G+ Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L
Sbjct: 76 PLSKKTL-KGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECL-- 132
Query: 457 MRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK 516
R + + DG+ A+II PTRELA QT E+ K+ K+ + + GG+ +K E +I +
Sbjct: 133 YREQWTAMDGLGALIISPTRELAYQTFEVLRKVGKNHEF-SAGLVIGGKDLKDESEKIHR 191
Query: 517 GISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQ 576
+I++ TPGRLL H T S + LVLDEADRILD G+ + +E L K +
Sbjct: 192 -TNIIICTPGRLLQHMDETAAFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR-- 248
Query: 577 FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T +V+ LA ++L++P + +H P +L+Q+++V
Sbjct: 249 -QTLLFSATQTRSVKDLARLSLKDP------EYVWVHEQA-KFSTPATLEQNYVVCELHQ 300
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
++ L SF+ Q K++VF A Y + L I+ LHG Q
Sbjct: 301 KVNMLYSFLRSHLQK-------KIIVFFACCKEVQYLFRIFCR-LRPGISVLALHGKQQQ 352
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+R EV+ F S VL TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 353 MKRVEVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKE 412
Query: 757 EGSSLLFLIPSEVK-LVEELQNRR 779
G +LL L+PSE K ++ +LQ ++
Sbjct: 413 GGGALLVLLPSEEKGMISQLQEKK 436
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q T +Q+ +I L G DVL ++TGSGKTLA+ IP+++ L R + + DG+ A+II
Sbjct: 92 QPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECL--YREQWTAMDGLGALIIS 149
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA QT E+ K+ K+ + + GG+ +K E +I + +I++ TPGRLL H
Sbjct: 150 PTRELAYQTFEVLRKVGKNHEF-SAGLVIGGKDLKDESEKIHR-TNIIICTPGRLLQHMD 207
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S + LVLDEADRILD G+ + +E L K + Q++L SAT T
Sbjct: 208 ETAAFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR---QTLLFSATQT 258
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S + LVLDEADRILD G+ + +E L K + Q++L S
Sbjct: 198 TPGRLLQHMDETAAFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSR---QTLLFS 254
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T +V+ LA ++L++P + +H P +L+Q+++V ++ L S
Sbjct: 255 ATQTRSVKDLARLSLKDP------EYVWVHEQA-KFSTPATLEQNYVVCELHQKVNMLYS 307
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADY 324
F+ Q K++VF A Y
Sbjct: 308 FLRSHLQK-------KIIVFFACCKEVQY 329
>gi|253746576|gb|EET01760.1| ATP-dependent RNA helicase HAS1, putative [Giardia intestinalis
ATCC 50581]
Length = 545
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 258/533 (48%), Gaps = 60/533 (11%)
Query: 369 PDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLN-------EGMNITQVTTVQQL 421
PD P +P Y+E PF + +L+ + M +T +Q
Sbjct: 6 PDAP-------EPAESGEVDNAKYQEIMTETPFTETSLSPFLLEAIDAMGHKNMTRIQAA 58
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI IL G ++ ++ TGSGK+LA+ +P I + + K+ G+ +++ PTRELALQ
Sbjct: 59 SIPVILSGRNMTAKAHTGSGKSLAFLLPAIDLIHKANMKLHHGTGV--IVLTPTRELALQ 116
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ T+L S T I GG + E + KG SI++ATPGRL DH +T K
Sbjct: 117 LYNVATQLI-SATNITVGLAIGGTSRQKEANHLCKGASIVIATPGRLCDHLNNTPGFKTD 175
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
K+ L+LDEAD +L+ G+++++ L +L K + Q SAT++ + M +
Sbjct: 176 KLFMLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSDKCLEVPHMEVNKE 234
Query: 602 IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKML 661
+ +TD ++T + +Q +I+ PP+ R + L +F+ + K++
Sbjct: 235 TLVRI--NTDTKSSTATRA---HFEQGYIICPPEQRFLLLYTFM-------KRRSDKKII 282
Query: 662 VFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAA 721
VF++++D +++ E L + ++ L G M Q +R E + F + +SGVL+ T+VAA
Sbjct: 283 VFLSSRDSVEFYYEFLRFIGMASV--LMLDGGMKQKQRMETYNKFCNAQSGVLLATNVAA 340
Query: 722 RGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR--VGHEGSSLLFLIPSEVKLVEELQNRR 779
RGLDLP +D+++Q+ P S Y+HR GR R +G LLFL+ E K + L+
Sbjct: 341 RGLDLPAIDYVIQFDPPESVESYIHRAGRACRGDTSKKGVGLLFLMSHETKFISFLKAHN 400
Query: 780 IRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKG 839
+ + E + AD + +Q E+ + L A
Sbjct: 401 VSLFEFEFP------------------ADKIIN-----VQAEMENLIATIYYLRRKAQNA 437
Query: 840 YTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-ISGIGKPKNKE 891
Y S++ YAS+ L+ +F+ +I L +SF L + P V + GI KN E
Sbjct: 438 YRSFISAYASHH--LKKVFSVNKIDLECLGRSFGLTEVPRVDVPGISLYKNME 488
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SI IL G ++ ++ TGSGK+LA+ +P I + + K+ G+
Sbjct: 47 MGHKNMTRIQAASIPVILSGRNMTAKAHTGSGKSLAFLLPAIDLIHKANMKLHHGTGV-- 104
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + T+L S T I GG + E + KG SI++ATPGRL
Sbjct: 105 IVLTPTRELALQLYNVATQLI-SATNITVGLAIGGTSRQKEANHLCKGASIVIATPGRLC 163
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +T K K+ L+LDEAD +L+ G+++++ L +L K + Q SAT++
Sbjct: 164 DHLNNTPGFKTDKLFMLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSDK 222
Query: 181 TCWCKHTETLK 191
H E K
Sbjct: 223 CLEVPHMEVNK 233
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 184 CKH---TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
C H T K K+ L+LDEAD +L+ G+++++ L +L K + Q SAT++
Sbjct: 163 CDHLNNTPGFKTDKLFMLILDEADMLLEYGFQQELEAILRMLPGPKLR-QVCFFSATMSD 221
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
+ M + + +TD ++T + +Q +I+ PP+ R + L +F+
Sbjct: 222 KCLEVPHMEVNKETLVRI--NTDTKSSTATRA---HFEQGYIICPPEQRFLLLYTFM--- 273
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
+ K++VF++++D +++ E L
Sbjct: 274 ----KRRSDKKIIVFLSSRDSVEFYYEFL 298
>gi|302802592|ref|XP_002983050.1| hypothetical protein SELMODRAFT_234167 [Selaginella moellendorffii]
gi|300149203|gb|EFJ15859.1| hypothetical protein SELMODRAFT_234167 [Selaginella moellendorffii]
Length = 465
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 266/505 (52%), Gaps = 71/505 (14%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N T +T +Q SI +L G DVL S+TG+GKTLA+ +P ++ L R +I ++G +
Sbjct: 22 NFTHMTEIQARSIPRLLAGSDVLGASRTGTGKTLAFLVPALELLN--RVQIKPRNGTVVL 79
Query: 471 IILPTRELALQTLEIFTKL--CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
II PTRELA Q + +KL S T +V +TGG K E +++ G+++LVATPGRL
Sbjct: 80 IISPTRELASQIHGVASKLMSAHSQTHMV---ITGGLNRKVEAVKLKAGVNLLVATPGRL 136
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERD-IAEFLEILKKQKPQFQSILLSATLT 587
LDH + T + +++LV+DEADR+LD G + D + FL + ++++
Sbjct: 137 LDHLRSTAGWIYHNLKYLVIDEADRLLDIGIQSDRLCSFLRLYQRRRA------------ 184
Query: 588 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 647
V++LA ++L++P I + + S V L+Q + V P + RL+ L S
Sbjct: 185 -LVKQLANLSLKDPTYIG------VESIEQSTV--QGLEQGYWVVPLEKRLLLLIS---- 231
Query: 648 KCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFR 707
++ ++ K++VF ++ + +H EL + + +HG QS RT F F
Sbjct: 232 ---SLYRSKKKKVMVFFSSCNSVKFHFELFCHI---GLECLSIHGKQKQSTRTSAFTEFC 285
Query: 708 SVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIP 766
+ ++G+L+CTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR G G +LLFL+P
Sbjct: 286 AAENGLLLCTDVAARGLDIPAVDWIIQYDPPPDPKEYIHRVGRTARGEGARGRALLFLLP 345
Query: 767 SEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ +L+ R+ IKL + L N++T E+ +
Sbjct: 346 QELLFTSDLKRSRV---PIKLWPSSKPL---------------NIQTF-------LETQI 380
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI-- 884
L+ + + A + S++R Y +++ F+ ++ L A SF L+ P + I
Sbjct: 381 LKIQGMQRLAADAFKSYLRSYQAHTA----AFDIHKLDLQALAASFCLKSIPPSCTSIHS 436
Query: 885 GKPKNKEELKNKKMAINKEKSFKQR 909
K++++ K A + E + +R
Sbjct: 437 NAAKHRKKRKGAGHAFSAEDPYGKR 461
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 106/167 (63%), Gaps = 8/167 (4%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N T +T +Q SI +L G DVL S+TG+GKTLA+ +P ++ L R +I ++G +
Sbjct: 22 NFTHMTEIQARSIPRLLAGSDVLGASRTGTGKTLAFLVPALELLN--RVQIKPRNGTVVL 79
Query: 62 IILPTRELALQTLEIFTKL--CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
II PTRELA Q + +KL S T +V +TGG K E +++ G+++LVATPGRL
Sbjct: 80 IISPTRELASQIHGVASKLMSAHSQTHMV---ITGGLNRKVEAVKLKAGVNLLVATPGRL 136
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERD-IAEFLEILKKQK 165
LDH + T + +++LV+DEADR+LD G + D + FL + ++++
Sbjct: 137 LDHLRSTAGWIYHNLKYLVIDEADRLLDIGIQSDRLCSFLRLYQRRR 183
>gi|443716343|gb|ELU07919.1| hypothetical protein CAPTEDRAFT_209893 [Capitella teleta]
Length = 483
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 239/476 (50%), Gaps = 48/476 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
+N +T VQ I L DV + TGSGKTLA+ +PI++ L + KD + A
Sbjct: 23 LNFKLMTPVQAACIPLFLSNKDVAAEAVTGSGKTLAFVVPILEILLRRETPLRSKD-VGA 81
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRL 528
+I+ PTRELA+Q E+ + K I GG M + G +ILVATPGRL
Sbjct: 82 LIVTPTRELAVQIDEVLGEFLKEIPHITHQLFIGGNNPMTDVNKFMEHGGNILVATPGRL 141
Query: 529 LDHCKHTE-----TLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
+D + T +E LVLDEAD++L G++R + L L KQ+ ++ L S
Sbjct: 142 VDMLNRRDEGLDLTASVKALEVLVLDEADQLLAMGFQRSLNTILSYLPKQR---RTGLFS 198
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT T ++ L L+NP+++ A H + P SL ++++ + L +
Sbjct: 199 ATQTKELEDLIRAGLRNPVRV-AVKERGAHGEEVNRKTPASLMNYYMIVESDQKFNHLVA 257
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ +++DE K LVF +T DY T+ L VL + + F +H + R ++F
Sbjct: 258 FL-----QLHKDE--KHLVFFSTCAAVDYFTKALKHVL-KKMQIFCIHSK--KESRNKIF 307
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
+FR +K GVL+CTDV RG+D+P ++W+ QY PSSS+++VHR GRTAR+GH GS++++
Sbjct: 308 TSFRKMKGGVLVCTDVMGRGVDIPEINWVTQYDPPSSSSNFVHRCGRTARIGHTGSAIVY 367
Query: 764 LIPSEVKLVEELQ-NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L P E V L N+++ + E D + + TAA
Sbjct: 368 LRPIEETYVSFLSINQKVPLVEHVPPDDVPD------------------HTAA------L 403
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP 878
+ +L + ++ K + S+V+ YA + L IF K + + A F L P
Sbjct: 404 KKLMLHDRAMYERGMKAFVSFVQSYAKHECSL--IFRVKDLDIAKLANGFGLVRLP 457
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 153/344 (44%), Gaps = 71/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+N +T VQ I L DV + TGSGKTLA+ +PI++ L + KD + A
Sbjct: 23 LNFKLMTPVQAACIPLFLSNKDVAAEAVTGSGKTLAFVVPILEILLRRETPLRSKD-VGA 81
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEK-MKSEKARIRKGISILVATPGRL 119
+I+ PTRELA+Q E+ + K I GG M + G +ILVATPGRL
Sbjct: 82 LIVTPTRELAVQIDEVLGEFLKEIPHITHQLFIGGNNPMTDVNKFMEHGGNILVATPGRL 141
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
+D +L+ D LD L+A++
Sbjct: 142 VD----------------MLNRRDEGLD-------------------------LTASV-- 158
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
+E LVLDEAD++L G++R + L L KQ+ ++ L SAT T
Sbjct: 159 -------------KALEVLVLDEADQLLAMGFQRSLNTILSYLPKQR---RTGLFSATQT 202
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
++ L L+NP+++ A H + P SL ++++ + L +F+
Sbjct: 203 KELEDLIRAGLRNPVRV-AVKERGAHGEEVNRKTPASLMNYYMIVESDQKFNHLVAFL-- 259
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELLSTKKKIKKLKEYNI 343
+++DE K LVF +T DY T+ L K +KK++ + I
Sbjct: 260 ---QLHKDE--KHLVFFSTCAAVDYFTKAL--KHVLKKMQIFCI 296
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 217/364 (59%), Gaps = 29/364 (7%)
Query: 420 QLSIQPI-LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 478
Q +I PI L G DV R+QTGSGKT A+A+P+++++ RPK + I+ VI++PTREL
Sbjct: 237 QAAIIPIALTGRDVCGRAQTGSGKTAAFALPLLERMLH-RPKNA-VSAIHVVIMVPTREL 294
Query: 479 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETL 538
A+Q ++ +L + +T + + + GG M+ + A +R+ I+VATPGRL+DH ++T +
Sbjct: 295 AVQCAQMIQRLGE-YTNVQVATIVGGLSMERQAAALRQRPEIVVATPGRLIDHVRNTHSF 353
Query: 539 KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTL 598
F V +VLDEADR+L+ G+ + E EI++ Q Q++L SATLT AV+ LA +++
Sbjct: 354 GFEDVAAVVLDEADRLLEMGF---LEEIKEIVRNMPRQRQTLLFSATLTSAVEELASLSM 410
Query: 599 QNPIQIDAADS--TDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDE 656
+NP ++ +ADS T T+ +V +K F+ L L+ GK
Sbjct: 411 RNPARL-SADSLGTTPMTLTEEIV---KIKPQFVAKKEAHLLSLLSRSFKGK-------- 458
Query: 657 ESKMLVFMATQDMADYHTELLSTVLG-ENIAFFKLHGSMSQSERTEVFKTFRS-VKSGVL 714
+ +VF T+ A L VLG NI +LHG M+Q++R + FRS ++ ++
Sbjct: 459 --ETIVFAKTKVQA----HRLKIVLGLSNIKACELHGDMTQTQRLAALEDFRSNAETKIM 512
Query: 715 ICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEE 774
+ TDVAARGLD+ VD +V Y AP + Y+HRVGRTAR G +G ++ F+ + LV+
Sbjct: 513 VATDVAARGLDIASVDLVVSYDAPKNVASYLHRVGRTARAGRKGVAITFMEEYDRALVKT 572
Query: 775 LQNR 778
LQ R
Sbjct: 573 LQKR 576
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 113/171 (66%), Gaps = 7/171 (4%)
Query: 11 QLSIQPI-LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTREL 69
Q +I PI L G DV R+QTGSGKT A+A+P+++++ RPK + I+ VI++PTREL
Sbjct: 237 QAAIIPIALTGRDVCGRAQTGSGKTAAFALPLLERMLH-RPKNA-VSAIHVVIMVPTREL 294
Query: 70 ALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETL 129
A+Q ++ +L + +T + + + GG M+ + A +R+ I+VATPGRL+DH ++T +
Sbjct: 295 AVQCAQMIQRLGE-YTNVQVATIVGGLSMERQAAALRQRPEIVVATPGRLIDHVRNTHSF 353
Query: 130 KFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
F V +VLDEADR+L+ G+ + E EI++ Q Q++L SATLT A
Sbjct: 354 GFEDVAAVVLDEADRLLEMGF---LEEIKEIVRNMPRQRQTLLFSATLTSA 401
>gi|242009200|ref|XP_002425379.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212509173|gb|EEB12641.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 587
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 249/475 (52%), Gaps = 57/475 (12%)
Query: 415 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 474
+T VQ +I + + DV V + TGSGKTLA+ IP I+ L RP+ + + + AVII P
Sbjct: 30 MTPVQAATIPLLQNHKDVAVEAVTGSGKTLAFLIPAIEILIS-RPERWKINEVGAVIISP 88
Query: 475 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE-KARIRKGISILVATPGRLLD--- 530
TRELA+Q ++ K + + L GG+ ++++ K KG +I+VATPGR D
Sbjct: 89 TRELAIQIFDVLQKFLEH-CQLKGLLLVGGDTVENDVKNYKEKGGNIIVATPGRFEDLLV 147
Query: 531 --HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 588
+C +K +E L+LDEADR+LD G+E+ + L +L KQ+ ++ L SAT T
Sbjct: 148 RQNCNLLGGVK--SLEILILDEADRLLDLGFEKTLNNILLLLPKQR---RTGLFSATQTK 202
Query: 589 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V++LA L+NP+ + + + +T P SL +++V+ +L L FI
Sbjct: 203 EVEKLARAGLRNPVVVCVKEKVNTQIST-----PVSLSNYYLVSEGNTKLGTLIGFI--- 254
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
N+ ++ K F +T ++ +L V +++ LHG M + +R +V FRS
Sbjct: 255 ---NNQGKDKKYFFFFSTCACVEWFYIVLKEVF-QDVNISSLHGKMGK-KRLKVLDKFRS 309
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
++SG+L+CTDV ARG+D+P VDW++Q+ P+ +VHRVGRTAR G GSSLL L+PSE
Sbjct: 310 LESGLLLCTDVMARGIDIPEVDWVIQFDPPTKPASFVHRVGRTARNGLTGSSLLMLLPSE 369
Query: 769 ---VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
+ +E+ QN ++ ++ D N+ ++ +
Sbjct: 370 DLYIDFIEKNQNVKL----------------------FKKIVDWNIPDVLKIMR----NL 403
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
L+ + A + + S+++ YA + L IF K + G A F L P +
Sbjct: 404 QLKDRNNFDKANRAFVSFIQSYAKHECSL--IFRIKDLEFGKLATGFGLLKMPKM 456
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 13/179 (7%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ +I + + DV V + TGSGKTLA+ IP I+ L RP+ + + + AVII P
Sbjct: 30 MTPVQAATIPLLQNHKDVAVEAVTGSGKTLAFLIPAIEILIS-RPERWKINEVGAVIISP 88
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSE-KARIRKGISILVATPGRLLD--- 121
TRELA+Q ++ K + + L GG+ ++++ K KG +I+VATPGR D
Sbjct: 89 TRELAIQIFDVLQKFLEH-CQLKGLLLVGGDTVENDVKNYKEKGGNIIVATPGRFEDLLV 147
Query: 122 --HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+C +K +E L+LDEADR+LD G+E+ + L +L KQ+ ++ L SAT T
Sbjct: 148 RQNCNLLGGVK--SLEILILDEADRLLDLGFEKTLNNILLLLPKQR---RTGLFSATQT 201
>gi|430811243|emb|CCJ31259.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 5307
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 212/373 (56%), Gaps = 24/373 (6%)
Query: 414 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 473
++T +Q+ +I L G DVL ++TGSGKT+A+ + ++ L +R K S DG+ A++I
Sbjct: 61 RLTDIQKKAIPVALSGRDVLAAARTGSGKTIAFLV--LENL--LRKKWSIYDGLGALVIS 116
Query: 474 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 533
PTRELA Q ++ K+ K + GG+ ++ E RI + ++I++ TPGR+L H
Sbjct: 117 PTRELATQIFQVLCKIGKKHNF-SAGLAIGGKDLQEEAQRISR-MNIMICTPGRILQHMD 174
Query: 534 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRL 593
T S ++ LVLDEAD ILD G+++ I +E + K + Q++L SAT T V+ L
Sbjct: 175 QTSGFDVSNLQILVLDEADCILDMGFQKTIDAIIENIPKNR---QTLLFSATQTKRVKDL 231
Query: 594 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 653
+ ++L+NP D +H S P +L+Q++ + ++ AL SF+ +
Sbjct: 232 SRLSLRNP------DYIAVHEKEAS-STPPTLEQYYSIVLLHEKINALFSFLRTNLK--- 281
Query: 654 EDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGV 713
+K+LVFM+T + E+ L I ++G Q R + F + K V
Sbjct: 282 ----AKVLVFMSTSKQVRFIYEVFRR-LQPGIPLLHIYGRKKQISRNLITSRFSTAKYAV 336
Query: 714 LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVE 773
+ CTD+AARGLD P+VDW++Q+ P ++ Y+HRVGRTAR G +L+FL PSE+K++E
Sbjct: 337 MFCTDIAARGLDFPMVDWVLQFDCPENADTYIHRVGRTARFDKNGKALMFLCPSEIKILE 396
Query: 774 ELQNRRIRIEEIK 786
L ++ I ++
Sbjct: 397 HLVKKKAYISYLR 409
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 9/174 (5%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ +I L G DVL ++TGSGKT+A+ + ++ L +R K S DG+ A++I
Sbjct: 61 RLTDIQKKAIPVALSGRDVLAAARTGSGKTIAFLV--LENL--LRKKWSIYDGLGALVIS 116
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q ++ K+ K + GG+ ++ E RI + ++I++ TPGR+L H
Sbjct: 117 PTRELATQIFQVLCKIGKKHNF-SAGLAIGGKDLQEEAQRISR-MNIMICTPGRILQHMD 174
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S ++ LVLDEAD ILD G+++ I +E + K + Q++L SAT T
Sbjct: 175 QTSGFDVSNLQILVLDEADCILDMGFQKTIDAIIENIPKNR---QTLLFSATQT 225
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 17/144 (11%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T S ++ LVLDEAD ILD G+++ I +E + K + Q++L SAT T V+ L
Sbjct: 175 QTSGFDVSNLQILVLDEADCILDMGFQKTIDAIIENIPKNR---QTLLFSATQTKRVKDL 231
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
+ ++L+NP D +H S P +L+Q++ + ++ AL SF+ +
Sbjct: 232 SRLSLRNP------DYIAVHEKEAS-STPPTLEQYYSIVLLHEKINALFSFLRTNLK--- 281
Query: 306 EDEESKMLVFMATQDMADYHTELL 329
+K+LVFM+T + E+
Sbjct: 282 ----AKVLVFMSTSKQVRFIYEVF 301
>gi|224126463|ref|XP_002319844.1| predicted protein [Populus trichocarpa]
gi|222858220|gb|EEE95767.1| predicted protein [Populus trichocarpa]
Length = 766
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 224/403 (55%), Gaps = 31/403 (7%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGM---NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
T ++E P + K +G+ N +++T +Q+ S+ L G D+L ++TGSGKTL
Sbjct: 66 GATMFKELP-----LSKRTQDGLKRANFSKMTDIQRASLPHSLCGRDILGAAKTGSGKTL 120
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
A+ IPI++KL + R +DG+ +II PTRELA Q ++ + K + + G
Sbjct: 121 AFIIPILEKLYKER--WGSEDGVGGIIISPTRELAGQLFDVLKTVGKFHNFSAGLLIGGR 178
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
++++ EK + +SILV TPGRLL H T S+++ LVLDEADRILD G+++ +
Sbjct: 179 KEVEMEKEHV-NALSILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLN 237
Query: 565 EFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDS 624
+ L K + Q++L SAT T ++Q LA ++L++P I +H ++ P
Sbjct: 238 AIVAQLPKHR---QTLLFSATQTKSIQDLARLSLKDPEYIS------VHEDAET-ATPSR 287
Query: 625 LKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGEN 684
L+Q ++ P + +L L SF+ SK+LVF+++ + E L
Sbjct: 288 LQQTAMIVPLEQKLDMLWSFVKAHLN-------SKILVFLSSCKQVKFVFEAFKK-LRPG 339
Query: 685 IAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDL-PLVDWIVQYTAPSSSTD 743
I LHG M Q +R ++ F S VL TDVA+RGLD VDW+VQ P
Sbjct: 340 IPLKCLHGRMKQEKRMGIYSQFCESHS-VLFSTDVASRGLDFNKAVDWVVQVDCPDDVAS 398
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIK 786
Y+HRVGRTAR G S+LFL+PSE+K++E+LQ +I ++ IK
Sbjct: 399 YIHRVGRTARYLAGGRSVLFLMPSEMKMLEKLQTAKIPVQFIK 441
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 108/177 (61%), Gaps = 6/177 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +++T +Q+ S+ L G D+L ++TGSGKTLA+ IPI++KL + R +DG+ +
Sbjct: 87 NFSKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAFIIPILEKLYKER--WGSEDGVGGI 144
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA Q ++ + K + + G ++++ EK + +SILV TPGRLL
Sbjct: 145 IISPTRELAGQLFDVLKTVGKFHNFSAGLLIGGRKEVEMEKEHV-NALSILVCTPGRLLQ 203
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
H T S+++ LVLDEADRILD G+++ + + L K + Q++L SAT T
Sbjct: 204 HMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIVAQLPKHR---QTLLFSATQT 257
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S+++ LVLDEADRILD G+++ + + L K + Q++L S
Sbjct: 197 TPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIVAQLPKHR---QTLLFS 253
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T ++Q LA ++L++P I +H ++ P L+Q ++ P + +L L S
Sbjct: 254 ATQTKSIQDLARLSLKDPEYI------SVHEDAET-ATPSRLQQTAMIVPLEQKLDMLWS 306
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
F+ SK+LVF+++
Sbjct: 307 FVKAHLN-------SKILVFLSS 322
>gi|408394462|gb|EKJ73670.1| hypothetical protein FPSE_06288 [Fusarium pseudograminearum CS3096]
Length = 791
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 236/477 (49%), Gaps = 51/477 (10%)
Query: 408 EGMNITQ---VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
EG+ I +T VQ ++ L G D+L ++TGSGKTLA+ IP+++KL R + +
Sbjct: 64 EGLEIAHFQTLTDVQAEAVPLALKGKDILGAAKTGSGKTLAFLIPVLEKL--YRAQWTEF 121
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
DG+ A+II PTRELA Q E+ K+ ++ + GG+ +K E R+ + ++ILV T
Sbjct: 122 DGLGALIISPTRELAAQIFEVLKKVGTKHSFSA-GLVIGGKSLKEEADRLDR-MNILVCT 179
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 584
PGR+L H T + ++ LVLDEADRI+D G++ + +E L +++ Q+++ SA
Sbjct: 180 PGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRER---QTLMFSA 236
Query: 585 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T + V LA ++L++P + +H S P +L+QH+IVTP +L L F
Sbjct: 237 TQSKKVSDLARLSLKDP------EYVSVHEAAVS-ATPTNLQQHYIVTPLTEKLDTLYGF 289
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
I + SK++VF+++ + E L I LHG Q R E+
Sbjct: 290 IKANLK-------SKIIVFLSSGKQVRFVYESFRH-LQPGIPLLHLHGRQKQGARMEITS 341
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
F + K L TDV ARG+D P VDW++Q P Y+HRVGRTAR G ++LFL
Sbjct: 342 RFTAAKQTCLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYESNGRAVLFL 401
Query: 765 IPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFES 824
PSE E +++ +++I ++ K D +S
Sbjct: 402 DPSE----EPGMLKKLELKKIPIQKVNVKEKKKKSIKD------------------QLQS 439
Query: 825 AVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L K + S+ R + KD +F F ++ L FA S L P V
Sbjct: 440 MCFQNPDLKYLGQKAFISYSRSIHLQRDKD---VFKFNKLDLDGFAASLGLPGTPQV 493
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T VQ ++ L G D+L ++TGSGKTLA+ IP+++KL R + + DG+ A+II P
Sbjct: 74 LTDVQAEAVPLALKGKDILGAAKTGSGKTLAFLIPVLEKL--YRAQWTEFDGLGALIISP 131
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q E+ K+ ++ + GG+ +K E R+ + ++ILV TPGR+L H
Sbjct: 132 TRELAAQIFEVLKKVGTKHSFSA-GLVIGGKSLKEEADRLDR-MNILVCTPGRMLQHFDQ 189
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
T + ++ LVLDEADRI+D G++ + +E L +++ Q+++ SAT
Sbjct: 190 TAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRER---QTLMFSAT 237
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP +T F + ++ LVLDEADRI+D G++ + +E L +++ Q+++ S
Sbjct: 179 TPGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRER---QTLMFS 235
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT + V LA ++L++P + +H S P +L+QH+IVTP +L L
Sbjct: 236 ATQSKKVSDLARLSLKDP------EYVSVHEAAVS-ATPTNLQQHYIVTPLTEKLDTLYG 288
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI + SK++VF+++
Sbjct: 289 FIKANLK-------SKIIVFLSS 304
>gi|194375087|dbj|BAG62656.1| unnamed protein product [Homo sapiens]
Length = 411
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 215/385 (55%), Gaps = 23/385 (5%)
Query: 391 SYEEFP-GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIP 449
S+E P +HP + L E + +T VQ +I + DV + TGSGKTLA+ IP
Sbjct: 8 SWESLPVPLHPQVLGALRE-LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIP 66
Query: 450 IIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKS 509
I++ L K+ +K + A+II PTRELA+Q E+ + K F GG
Sbjct: 67 ILEILLRREEKL-KKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGE 125
Query: 510 EKARIRK-GISILVATPGRLLDHCKH-TETLKFSK----VEHLVLDEADRILDQGYERDI 563
+ R ++ G +I+VATPGRL D + E L + ++ LVLDEADR+LD G+E I
Sbjct: 126 DVERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASI 185
Query: 564 AEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPD 623
LE L KQ+ ++ L SAT T V+ L L+NP+++ + ++ P
Sbjct: 186 NTILEFLPKQR---RTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPS 240
Query: 624 SLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGE 683
L+ +++V + L F+ ++ + LVF +T +Y+ + L VL +
Sbjct: 241 RLENYYMVCKADEKFNQLVHFL-------RNHKQERHLVFFSTCACVEYYGKALE-VLVK 292
Query: 684 NIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTD 743
+ +HG M + +R ++F FR ++SG+L+CTDV ARG+D+P V+W++QY PS+++
Sbjct: 293 GVKIMCIHGKM-KYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASA 351
Query: 744 YVHRVGRTARVGHEGSSLLFLIPSE 768
+VHR GRTAR+GH GS+L+FL+P E
Sbjct: 352 FVHRCGRTARIGHGGSALVFLLPME 376
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 139/330 (42%), Gaps = 70/330 (21%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ +T VQ +I + DV + TGSGKTLA+ IPI++ L K+ +K + A
Sbjct: 27 LGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKL-KKSQVGA 85
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRK-GISILVATPGRL 119
+II PTRELA+Q E+ + K F GG + R ++ G +I+VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRL 145
Query: 120 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTP 179
D + K E L L R LD
Sbjct: 146 EDMFRR-------KAEGLDLASCVRSLDV------------------------------- 167
Query: 180 ATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLT 239
LVLDEADR+LD G+E I LE L KQ+ ++ L SAT T
Sbjct: 168 ------------------LVLDEADRLLDMGFEASINTILEFLPKQR---RTGLFSATQT 206
Query: 240 PAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILG 299
V+ L L+NP+++ + ++ P L+ +++V + L F+
Sbjct: 207 QEVENLVRAGLRNPVRVSVKEKGVAASSAQK--TPSRLENYYMVCKADEKFNQLVHFL-- 262
Query: 300 KCQNVNEDEESKMLVFMATQDMADYHTELL 329
++ + LVF +T +Y+ + L
Sbjct: 263 -----RNHKQERHLVFFSTCACVEYYGKAL 287
>gi|198424759|ref|XP_002127650.1| PREDICTED: similar to Ddx10 protein [Ciona intestinalis]
Length = 736
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 213/392 (54%), Gaps = 25/392 (6%)
Query: 392 YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
+EEFP K L + +T +Q+ +I+P + G D+L ++TGSGKTLA+ IPI+
Sbjct: 50 FEEFP-FATKTKAGLRKA-GFVSLTAIQRAAIKPAMLGKDILGAAKTGSGKTLAFIIPIL 107
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L + + DG A++I PTRELA Q E+ K+ + L GG +K E
Sbjct: 108 ECLH--KHNWNSLDGPGALVISPTRELAFQIFEVLKKVGGKHNFSA-GLLIGGNNVKEEA 164
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
+ K +I++ TPGRLL H T + ++ L+LDEADRILD G++ + +E L
Sbjct: 165 HSVGK-TNIIICTPGRLLQHMDTTSYFHMNNLKMLILDEADRILDMGFKTTLDAIIENLP 223
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIV 631
++ Q++L SAT T +V+ LA ++L++P I + S H+T P L Q FI
Sbjct: 224 SER---QTLLFSATQTKSVKDLARLSLRDPAYI-SVHSEAKHST------PQGLTQRFIC 273
Query: 632 TPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLH 691
K +L L SFI ++SK LVF+++ + L LH
Sbjct: 274 CELKDKLNVLFSFI-------RNHQKSKCLVFVSSCKQVQFIFAAFCK-LRPGTPMLHLH 325
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G M+Q R V++ F K VL+ TD+AARGLD P +DW+VQ P + Y+HR GRT
Sbjct: 326 GRMNQLRRMSVYQEFCRKKFAVLVATDIAARGLDFPEIDWVVQLDCPEDADTYIHRAGRT 385
Query: 752 ARVGHEGSSLLFLIPSEVK-LVEELQNRRIRI 782
AR G+SLL L P+E + +++ LQN+++ I
Sbjct: 386 ARYNGNGNSLLVLTPTEKEAMLKHLQNKKVPI 417
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 7/173 (4%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ +I+P + G D+L ++TGSGKTLA+ IPI++ L + + DG A++I P
Sbjct: 71 LTAIQRAAIKPAMLGKDILGAAKTGSGKTLAFIIPILECLH--KHNWNSLDGPGALVISP 128
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q E+ K+ + L GG +K E + K +I++ TPGRLL H
Sbjct: 129 TRELAFQIFEVLKKVGGKHNFSA-GLLIGGNNVKEEAHSVGK-TNIIICTPGRLLQHMDT 186
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + ++ L+LDEADRILD G++ + +E L ++ Q++L SAT T
Sbjct: 187 TSYFHMNNLKMLILDEADRILDMGFKTTLDAIIENLPSER---QTLLFSATQT 236
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T + ++ L+LDEADRILD G++ + +E L ++ Q++L SAT T +V+ LA
Sbjct: 187 TSYFHMNNLKMLILDEADRILDMGFKTTLDAIIENLPSER---QTLLFSATQTKSVKDLA 243
Query: 247 GMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE 306
++L++P I + S H+T P L Q FI K +L L SFI
Sbjct: 244 RLSLRDPAYI-SVHSEAKHST------PQGLTQRFICCELKDKLNVLFSFI-------RN 289
Query: 307 DEESKMLVFMAT 318
++SK LVF+++
Sbjct: 290 HQKSKCLVFVSS 301
>gi|307189121|gb|EFN73577.1| Probable ATP-dependent RNA helicase DDX10 [Camponotus floridanus]
Length = 791
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 249/471 (52%), Gaps = 49/471 (10%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
N +T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L + +R DG+ A+
Sbjct: 57 NYIDMTDIQRQSIGLALQGNDILGAAKTGSGKTLAFLIPVLEIL--YCKQWTRLDGVGAL 114
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
II PTRELA Q E K+ + + + + GG+ +K E+ R+ + ++++ TPGRLL
Sbjct: 115 IITPTRELAYQIYETLRKVGR-YHDVSAGLIIGGKDLKFERKRMDQ-CNVVICTPGRLLQ 172
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H ++ LVLDEADR LD G+E+ + + L P+ Q++L SAT T +V
Sbjct: 173 HMDENPLFDCVNMQILVLDEADRCLDMGFEKTMNCIIANLP---PKRQTLLFSATQTKSV 229
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
+ LA ++L++P+ + + + H T P++L+Q++IV + ++ L SFI +
Sbjct: 230 KDLARLSLKDPLYVSVHEYS-THTT------PENLQQNYIVCSLEDKMAMLWSFIRNHLK 282
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
K++VF ++ Y E+ L ++ L+G++ Q +R ++++F +
Sbjct: 283 -------QKIIVFFSSCKQVKYIYEVFCR-LRPGVSLLALYGTLHQMKRMSIYESFCKKQ 334
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
VL TD+AARGLD P V+W++Q P Y+HR GRTAR G SLL L+PSE
Sbjct: 335 YAVLFATDIAARGLDFPAVNWVLQMDCPEDVNAYIHRAGRTARFQSGGESLLVLLPSEEG 394
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQK 830
++E KLK C K+ ++ R+ +++ L+ A+L Q
Sbjct: 395 IIE------------KLKQC-------KIPINMIRINPSKLQSPHRKLE-----ALLAQN 430
Query: 831 I-LHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
I L +A + + ++++ + + + IFN + +AKS L P +
Sbjct: 431 IALKETAQRAFIAYIK--SVFLMKDKEIFNVHALDTDAYAKSLGLAIPPRI 479
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
N +T +Q+ SI L G D+L ++TGSGKTLA+ IP+++ L + +R DG+ A+
Sbjct: 57 NYIDMTDIQRQSIGLALQGNDILGAAKTGSGKTLAFLIPVLEIL--YCKQWTRLDGVGAL 114
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
II PTRELA Q E K+ + + + + GG+ +K E+ R+ + ++++ TPGRLL
Sbjct: 115 IITPTRELAYQIYETLRKVGR-YHDVSAGLIIGGKDLKFERKRMDQ-CNVVICTPGRLLQ 172
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
H ++ LVLDEADR LD G+E+ + + L P+ Q++L SAT T +
Sbjct: 173 HMDENPLFDCVNMQILVLDEADRCLDMGFEKTMNCIIANL---PPKRQTLLFSATQTKS 228
>gi|356501519|ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
max]
Length = 746
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 234/418 (55%), Gaps = 28/418 (6%)
Query: 369 PDIP-NVPTRRLKPV-SEALFAPTS-YEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQP 425
P +P N P RL + + +A S +E+FP + K L E + +T +Q+ S+
Sbjct: 43 PPLPKNSPVGRLDDDDTYSRYAGASRFEQFP-LSKKTKDALRESKFVV-MTDIQRASLPH 100
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
L G D+L ++TGSGKTLA+ IP+++KL R + +DG+ ++II PTRELA Q ++
Sbjct: 101 ALCGRDILGAAKTGSGKTLAFIIPVLEKLH--RERWGPEDGVGSIIISPTRELAAQLFDV 158
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
+ K + + G + + EK R+ + ++IL+ TPGRLL H T S+++
Sbjct: 159 LKVVGKHHNFSAGLLIGGRKDVDMEKERVNE-LNILICTPGRLLQHMDETPNFDCSQMQV 217
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQID 605
LVLDEADRILD G+++++ + L K++ Q++L SAT T ++Q LA ++L++P
Sbjct: 218 LVLDEADRILDSGFKKELNAIISQLPKRR---QTLLFSATQTKSIQDLARLSLKDP---- 270
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
+ +H + + P LKQ ++ P + +L L SFI Q SK LVF++
Sbjct: 271 --EYLSVHEESVT-STPTLLKQIVMIVPLEQKLDMLWSFIKTHLQ-------SKTLVFLS 320
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + E L I LHG M Q R ++ F K VL TDVAARGLD
Sbjct: 321 SCKQVKFVFEAFKK-LHPGIPLKCLHGRMKQERRMAIYSEF-CEKRSVLFSTDVAARGLD 378
Query: 726 L-PLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRI 782
VDW+VQ P + Y+HRVGRTAR +G S+LFL+PSE++++E+L+ ++ +
Sbjct: 379 FNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPV 436
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 6/173 (3%)
Query: 6 VTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILP 65
+T +Q+ S+ L G D+L ++TGSGKTLA+ IP+++KL R + +DG+ ++II P
Sbjct: 90 MTDIQRASLPHALCGRDILGAAKTGSGKTLAFIIPVLEKLH--RERWGPEDGVGSIIISP 147
Query: 66 TRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKH 125
TRELA Q ++ + K + + G + + EK R+ + ++IL+ TPGRLL H
Sbjct: 148 TRELAAQLFDVLKVVGKHHNFSAGLLIGGRKDVDMEKERVNE-LNILICTPGRLLQHMDE 206
Query: 126 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T S+++ LVLDEADRILD G+++++ + L K++ Q++L SAT T
Sbjct: 207 TPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRR---QTLLFSATQT 256
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 19/143 (13%)
Query: 178 TPATCWCKHTETLKF--SKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
TP ET F S+++ LVLDEADRILD G+++++ + L K++ Q++L S
Sbjct: 196 TPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRR---QTLLFS 252
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT T ++Q LA ++L++P + +H + + P LKQ ++ P + +L L S
Sbjct: 253 ATQTKSIQDLARLSLKDP------EYLSVHEESVT-STPTLLKQIVMIVPLEQKLDMLWS 305
Query: 296 FILGKCQNVNEDEESKMLVFMAT 318
FI Q SK LVF+++
Sbjct: 306 FIKTHLQ-------SKTLVFLSS 321
>gi|366986649|ref|XP_003673091.1| hypothetical protein NCAS_0A01400 [Naumovozyma castellii CBS 4309]
gi|342298954|emb|CCC66698.1| hypothetical protein NCAS_0A01400 [Naumovozyma castellii CBS 4309]
Length = 762
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 250/495 (50%), Gaps = 46/495 (9%)
Query: 404 KNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISR 463
K L+E ++T +Q+ SI L G DVL ++TGSGKTLA+ IP+++KL R + +
Sbjct: 54 KGLSEAA-FLKLTDIQRESIPVSLKGYDVLGSAKTGSGKTLAFLIPVLEKL--YRERWTE 110
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
DG+ A+II PTRELA+Q E+ K+ S T + GG+ +K E RI + I+IL+
Sbjct: 111 FDGLGALIISPTRELAMQIYEVLIKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIG 168
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGR+L H L S ++ LVLDEADR LD G+++ + I+ P Q++L S
Sbjct: 169 TPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDA---IVGNLPPSRQTLLFS 225
Query: 584 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
AT + ++ LA ++L + + D + + ++ P +L+Q +I +L L S
Sbjct: 226 ATQSQSLADLARLSLTDYKSVGTMDKANEKSDAEA-ATPATLEQSYIEVELADKLDVLFS 284
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
FI + +KM+VF+++ + E L I+ LHG Q RTE
Sbjct: 285 FIKTHLK-------AKMIVFLSSSKQVHFVYETFRK-LQPGISLMHLHGRQKQKARTETL 336
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
F + L TDV ARG+D P VDW++Q P + Y+HRVGR+AR G +G SL+
Sbjct: 337 DKFSRAQQVCLFATDVVARGIDFPSVDWVIQLDCPEDADTYIHRVGRSARYGKKGKSLIM 396
Query: 764 LIPSEVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
L P+E ++ L R+I L N L++K + +++
Sbjct: 397 LTPTEKDAFLKRLSARKI----------LPNQLTIKQ-------------SKKKSIKPQL 433
Query: 823 ESAVLQQKILHTSACKGYTSWVR-FYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV- 880
+S + + L K + S++R Y KD +F F ++ FA S L AP +
Sbjct: 434 QSLLFKDPELKYLGQKAFISYIRSIYVQKDKD---VFKFDELPTEEFATSLGLPGAPKIK 490
Query: 881 ISGIGKPKNKEELKN 895
I G+ +ELKN
Sbjct: 491 IRGMSTINRAKELKN 505
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 106/172 (61%), Gaps = 7/172 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T +Q+ SI L G DVL ++TGSGKTLA+ IP+++KL R + + DG+ A+II
Sbjct: 63 KLTDIQRESIPVSLKGYDVLGSAKTGSGKTLAFLIPVLEKL--YRERWTEFDGLGALIIS 120
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA+Q E+ K+ S T + GG+ +K E RI + I+IL+ TPGR+L H
Sbjct: 121 PTRELAMQIYEVLIKIG-SHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLD 178
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT
Sbjct: 179 QAVGLNTSNLQMLVLDEADRCLDMGFKKTLD---AIVGNLPPSRQTLLFSAT 227
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 190 LKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMT 249
L S ++ LVLDEADR LD G+++ + I+ P Q++L SAT + ++ LA ++
Sbjct: 183 LNTSNLQMLVLDEADRCLDMGFKKTLD---AIVGNLPPSRQTLLFSATQSQSLADLARLS 239
Query: 250 LQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEE 309
L + + D + + ++ P +L+Q +I +L L SFI +
Sbjct: 240 LTDYKSVGTMDKANEKSDAEA-ATPATLEQSYIEVELADKLDVLFSFIKTHLK------- 291
Query: 310 SKMLVFMAT 318
+KM+VF+++
Sbjct: 292 AKMIVFLSS 300
>gi|410920772|ref|XP_003973857.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Takifugu
rubripes]
Length = 954
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 251/485 (51%), Gaps = 52/485 (10%)
Query: 400 PFMKKNLN--EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEM 457
P KK L +G Q T +Q+ ++ L G DVL ++TGSGKTLA+ IP+++ L
Sbjct: 84 PISKKTLLGLQGAQYRQPTEIQRQTLGFALLGKDVLGAAKTGSGKTLAFLIPVLECL--Y 141
Query: 458 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
R + + DG+ A+II PTRELA QT E+ K+ K+ + + GG+ +K E +I+
Sbjct: 142 RQQWTSVDGLGALIISPTRELAYQTFEVLRKVGKNHEFSA-GLVIGGKDLKVESEQIQH- 199
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
+I++ TPGRLL H T + + + LVLDEADRILD G+ + +E L K +
Sbjct: 200 TNIIICTPGRLLQHMDQTASFHAANLHMLVLDEADRILDMGFAETLNAIVENLPKTR--- 256
Query: 578 QSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLR 637
Q++L SAT T +V+ LA ++L+ P + A + P +L+Q ++V +
Sbjct: 257 QTLLFSATQTKSVKDLARLSLKEPEYVWAHEKA-------KFSTPATLEQSYVVCELHQK 309
Query: 638 LVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQS 697
+ L SFI + K++VF A Y +L L LHG Q
Sbjct: 310 VNMLYSFIRNHLK-------KKIIVFFACCKEVQYLFRVLCR-LRPGTPVLALHGKQQQM 361
Query: 698 ERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHE 757
+R EV+ F + VL+ TD+AARGLD P V+W++Q+ P + Y+HRVGRTAR
Sbjct: 362 KRVEVYNDFLRKNTAVLLATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEG 421
Query: 758 GSSLLFLIPSEVK-LVEELQNRRIRIEEIKLK-DCLQNLLSVKMEGDLSRLADGNVETAA 815
G +LL L+PSE K ++ +L ++++ I++I++ + LQN
Sbjct: 422 GEALLLLLPSEEKGMLRQLLDKKVPIQKIQVNTEKLQN---------------------- 459
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
+Q E + Q+K A + + S++R + Y + +F+ Q+ + +A S L
Sbjct: 460 --VQQKLEGFLAQEKEQKERAQRCFISYLR--SIYLMKNKEVFDVCQLQIEEYAHSLGLA 515
Query: 876 DAPSV 880
AP V
Sbjct: 516 VAPRV 520
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 7/174 (4%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
Q T +Q+ ++ L G DVL ++TGSGKTLA+ IP+++ L R + + DG+ A+II
Sbjct: 100 QPTEIQRQTLGFALLGKDVLGAAKTGSGKTLAFLIPVLECL--YRQQWTSVDGLGALIIS 157
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA QT E+ K+ K+ + + GG+ +K E +I+ +I++ TPGRLL H
Sbjct: 158 PTRELAYQTFEVLRKVGKNHEFSA-GLVIGGKDLKVESEQIQH-TNIIICTPGRLLQHMD 215
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
T + + + LVLDEADRILD G+ + +E L K + Q++L SAT T
Sbjct: 216 QTASFHAANLHMLVLDEADRILDMGFAETLNAIVENLPKTR---QTLLFSATQT 266
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 186 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRL 245
T + + + LVLDEADRILD G+ + +E L K + Q++L SAT T +V+ L
Sbjct: 216 QTASFHAANLHMLVLDEADRILDMGFAETLNAIVENLPKTR---QTLLFSATQTKSVKDL 272
Query: 246 AGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVN 305
A ++L+ P + A + P +L+Q ++V ++ L SFI +
Sbjct: 273 ARLSLKEPEYVWAHEKA-------KFSTPATLEQSYVVCELHQKVNMLYSFIRNHLK--- 322
Query: 306 EDEESKMLVFMA 317
K++VF A
Sbjct: 323 ----KKIIVFFA 330
>gi|294888815|ref|XP_002772599.1| ATP-dependent RNA helicase dbp-4, putative [Perkinsus marinus ATCC
50983]
gi|239876947|gb|EER04415.1| ATP-dependent RNA helicase dbp-4, putative [Perkinsus marinus ATCC
50983]
Length = 504
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 243/457 (53%), Gaps = 43/457 (9%)
Query: 411 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 470
+++T +Q+ +I L G DVL ++TGSGK+LA+ IP+I+KL M K S DG+ AV
Sbjct: 77 GFSKLTPIQRSAIPYALAGRDVLGEARTGSGKSLAFIIPVIEKLYRM--KWSADDGVGAV 134
Query: 471 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 530
+I PTREL+ Q + ++ S + GG K + E+ ++ +SI+V TPGRLL
Sbjct: 135 LISPTRELSAQIFTVLQQV-GSHHDFSAGCVVGGRKFQEEQ-KVFPSLSIVVCTPGRLLQ 192
Query: 531 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAV 590
H + T S V+ LVLDEADRILD G+++ I L+ L P Q++L SAT+ +V
Sbjct: 193 HIEETAGSDLSNVQVLVLDEADRILDLGFKKTIELILDALP---PSRQTLLFSATMRTSV 249
Query: 591 QRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQ 650
Q+LA + L NP + + + S P L+Q + + ++ +L SF+ Q
Sbjct: 250 QQLATLALDNPELLSVSQNL-------SSATPTGLRQLCMTVRLEEKVNSLFSFLKTHAQ 302
Query: 651 NVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVK 710
+K++VF++ + E L +A +LHG MS +R +VF F S
Sbjct: 303 -------TKIIVFVSATKQVRFLYETFRR-LRPGLAVLELHGGMSLDKRMKVFDQFASKD 354
Query: 711 SGV-LICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP-SE 768
G+ LICTDVAARG+D P VDW++Q AP ++ Y+HRVGRTAR G++L+F E
Sbjct: 355 KGLCLICTDVAARGVDFPQVDWVIQMDAPDTADTYIHRVGRTARFDRNGNALMFATEVEE 414
Query: 769 VKLVEELQNRR--IRIEEIKLKDC------LQNLLSVKMEGDLSRLADGNVETAATALQM 820
L+ EL ++ +R+ I + LQ+LL+ E D+ LA + A A+ +
Sbjct: 415 ASLLPELAQKKVDVRVTSINRRRMFNITGKLQSLLA--SEPDVKHLAVKATQVYARAVAL 472
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
+ + + + ++ ++ YS D R +
Sbjct: 473 TGRTRLTEDEV---------AAYAHSLGGYSDDSRCV 500
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 2 NITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAV 61
+++T +Q+ +I L G DVL ++TGSGK+LA+ IP+I+KL M K S DG+ AV
Sbjct: 77 GFSKLTPIQRSAIPYALAGRDVLGEARTGSGKSLAFIIPVIEKLYRM--KWSADDGVGAV 134
Query: 62 IILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
+I PTREL+ Q + ++ S + GG K + E+ ++ +SI+V TPGRLL
Sbjct: 135 LISPTRELSAQIFTVLQQV-GSHHDFSAGCVVGGRKFQEEQ-KVFPSLSIVVCTPGRLLQ 192
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
H + T S V+ LVLDEADRILD G+++ I L+ L P Q++L SAT+
Sbjct: 193 HIEETAGSDLSNVQVLVLDEADRILDLGFKKTIELILDAL---PPSRQTLLFSATM 245
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 17/126 (13%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
S V+ LVLDEADRILD G+++ I L+ L P Q++L SAT+ +VQ+LA + L
Sbjct: 202 LSNVQVLVLDEADRILDLGFKKTIELILDAL---PPSRQTLLFSATMRTSVQQLATLALD 258
Query: 252 NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESK 311
NP + + + S P L+Q + + ++ +L SF+ Q +K
Sbjct: 259 NPELLSVSQNL-------SSATPTGLRQLCMTVRLEEKVNSLFSFLKTHAQ-------TK 304
Query: 312 MLVFMA 317
++VF++
Sbjct: 305 IIVFVS 310
>gi|303391040|ref|XP_003073750.1| DEAD box ATP-dependent RNA helicase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302898|gb|ADM12390.1| DEAD box ATP-dependent RNA helicase [Encephalitozoon intestinalis
ATCC 50506]
Length = 457
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 269/534 (50%), Gaps = 87/534 (16%)
Query: 389 PTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAI 448
P E+ P I+ +KK + E ++T VQQ+ + +L G DV+V+S TG+GKT+A+
Sbjct: 3 PRGIEDIP-INSILKKEI-EANGFGKMTDVQQMCVPEMLKGKDVVVQSPTGTGKTMAFLA 60
Query: 449 PIIQKLQEMRPKISRKDGIYAVIILPTRELALQ---TLEIFTKLCKSFTWIVPSWLTGGE 505
PI+ + + R + GI A+II PTRELALQ ++F C+ F GG
Sbjct: 61 PILSAIYDRR----EEKGIVAMIITPTRELALQIKDVADLFGVGCECFI--------GGM 108
Query: 506 KMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAE 565
++ + R++K I+V TPGRLL+ +T KFS+V H +LDEAD++L G+E + +
Sbjct: 109 NIEDDYERMKKEFPIVVGTPGRLLEIVGR-DTKKFSRVRHAILDEADKLLGFGFEEKLLQ 167
Query: 566 FLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSL 625
L L K + + L SAT+ +V +L+ +L+NP+ I+ ++ +P +L
Sbjct: 168 LLAKLPKNR---VTGLFSATINDSVSKLSMSSLRNPVSINVGNNA----------MPVAL 214
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENI 685
+IV P +L AL + G+ + +VF AT + D+ + LLS +NI
Sbjct: 215 --EYIVLSPMDKLFALVDIVPGR----------RCIVFFATCNEVDFFSSLLSRAGLQNI 262
Query: 686 AFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYV 745
K+HG + Q ER V++ F S +L CTDVAARG+D VD +V + P + V
Sbjct: 263 C--KIHGKIPQDERNRVYREFFKGNS-LLFCTDVAARGIDFQDVDLVVHFDIPKEYSSIV 319
Query: 746 HRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR 805
HR GRTAR G +G S+LF++P+E E L+ + I + E K
Sbjct: 320 HRSGRTARNGCKGESILFVMPNEKAYTEFLKLKGIPVAESSYKI---------------- 363
Query: 806 LADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHL 865
T+ + ++ +S +L + K + S++R Y + + +I ++K +
Sbjct: 364 ----KPSTSYSDIKSKIDSDLLNLSV------KAFVSYIRSYKEHF--VSYILDYKGLDF 411
Query: 866 GHFAKSFALRDAPSVISGIGKPKNKEELKNKKMA--INKEKSFKQRGNFSKKQM 917
A+ F L P + ELKN K + EK+ +++G KK++
Sbjct: 412 NSLAELFFLEKIPGM----------AELKNVKFEKFVKPEKT-ERKGTKPKKRI 454
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 19/177 (10%)
Query: 5 QVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIIL 64
++T VQQ+ + +L G DV+V+S TG+GKT+A+ PI+ + + R + GI A+II
Sbjct: 26 KMTDVQQMCVPEMLKGKDVVVQSPTGTGKTMAFLAPILSAIYDRR----EEKGIVAMIIT 81
Query: 65 PTRELALQ---TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLD 121
PTRELALQ ++F C+ F GG ++ + R++K I+V TPGRLL+
Sbjct: 82 PTRELALQIKDVADLFGVGCECF--------IGGMNIEDDYERMKKEFPIVVGTPGRLLE 133
Query: 122 HCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
+T KFS+V H +LDEAD++L G+E + + L L K + + L SAT+
Sbjct: 134 IVGR-DTKKFSRVRHAILDEADKLLGFGFEEKLLQLLAKLPKNR---VTGLFSATIN 186
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 25/143 (17%)
Query: 188 ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAG 247
+T KFS+V H +LDEAD++L G+E + + L L K + + L SAT+ +V +L+
Sbjct: 138 DTKKFSRVRHAILDEADKLLGFGFEEKLLQLLAKLPKNR---VTGLFSATINDSVSKLSM 194
Query: 248 MTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNED 307
+L+NP+ I+ ++ +P +L +IV P +L AL + G+
Sbjct: 195 SSLRNPVSINVGNNA----------MPVAL--EYIVLSPMDKLFALVDIVPGR------- 235
Query: 308 EESKMLVFMATQDMADYHTELLS 330
+ +VF AT + D+ + LLS
Sbjct: 236 ---RCIVFFATCNEVDFFSSLLS 255
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,731,477,448
Number of Sequences: 23463169
Number of extensions: 564204896
Number of successful extensions: 2044458
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 28912
Number of HSP's successfully gapped in prelim test: 11127
Number of HSP's that attempted gapping in prelim test: 1761699
Number of HSP's gapped (non-prelim): 116601
length of query: 930
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 778
effective length of database: 8,792,793,679
effective search space: 6840793482262
effective search space used: 6840793482262
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)