BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15524
(930 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H8H2|DDX31_HUMAN Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens GN=DDX31
PE=1 SV=2
Length = 851
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/604 (45%), Positives = 371/604 (61%), Gaps = 50/604 (8%)
Query: 362 SSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQL 421
SSLF+NNPDIP + +K V E +F ++ E G+HP + +N + ++ +T+VQ+
Sbjct: 202 SSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHEL-GLHPHLISTINTVLKMSSMTSVQKQ 260
Query: 422 SIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQ 481
SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA++++PTRELALQ
Sbjct: 261 SIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
Query: 482 TLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS 541
+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+DH K T+ + FS
Sbjct: 321 SFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFS 380
Query: 542 KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQNP 601
++ LV DEADRILD G+E+DI L + + + Q++LLSATLT V RLA ++L +P
Sbjct: 381 RLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDP 440
Query: 602 IQIDAADSTD-----------------IHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
+ I D + + DS IP+SLKQH V P KLRLV LA+F
Sbjct: 441 VSISVLDKSHDQLNPKDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAF 500
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTEL-LSTVLGENIA--------------FFK 689
IL KC+ +E+ KM+VF ++ ++ ++H L L T+L + A F +
Sbjct: 501 ILQKCKF---EEDQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLR 557
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHG M Q ERT VF+ F + GVL+CTDVAARGLDLP V WIVQY APSS +Y+HR+G
Sbjct: 558 LHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 617
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCL-----QNLLSVKMEGDLS 804
RTAR+G GSSLL L PSE + V L + +I + EIK++D L + K G
Sbjct: 618 RTARIGCHGSSLLILAPSEAEYVNSLASHKINVSEIKMEDILCVLTRDDCFKGKRWGAQK 677
Query: 805 RLADG--NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
A G + AT LQ FE V + + A K S+++ YA+Y ++L+HIF+ +
Sbjct: 678 SHAVGPQEIRERATVLQTVFEDYVHSSERRVSWAKKALQSFIQAYATYPRELKHIFHVRS 737
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQML-SEF 921
+HLGH AKSF LRDAP +S + + K K +K + K + S ++L SE+
Sbjct: 738 LHLGHVAKSFGLRDAPRNLSALTRKKRKAHVKRPDL------HKKTQSKHSLAEILRSEY 791
Query: 922 DSGL 925
SG+
Sbjct: 792 SSGM 795
Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 194/329 (58%), Gaps = 47/329 (14%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
+ ++ +T+VQ+ SI +L+G D LVRSQTGSGKTLAY IP++Q LQ M KI R DG YA
Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYA 308
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTRELALQ+ + KL K FTWIVP L GGEK KSEKAR+RKGI+IL++TPGRL+
Sbjct: 309 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLV 368
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K T+ + FS++ LV DEADRILD G+E+DI L + + + Q++LLSATLT
Sbjct: 369 DHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEG 428
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
T S + + + D+ DQ +D A + P
Sbjct: 429 V-----TRLADISLHDPVSISVLDKSHDQLNPKDKA----------------VQEVCPPP 467
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
A +L DS IP+SLKQH V P KLRLV LA+FIL K
Sbjct: 468 AGDKL-----------------------DSFAIPESLKQHVTVVPSKLRLVCLAAFILQK 504
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELL 329
C+ +E+ KM+VF ++ ++ ++H L
Sbjct: 505 CKF---EEDQKMVVFFSSCELVEFHYSLF 530
>sp|Q86B47|Y8611_DROME Probable ATP-dependent RNA helicase CG8611 OS=Drosophila
melanogaster GN=CG8611 PE=1 SV=1
Length = 975
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/563 (44%), Positives = 359/563 (63%), Gaps = 70/563 (12%)
Query: 377 RRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRS 436
R +KPV E +F + G+HP KNL + ++I ++T+VQQ +I +L G DVLVRS
Sbjct: 314 RAVKPVKETIFTGSKISTL-GLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRS 372
Query: 437 QTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWI 496
QTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A++I+PTREL +QT E+ KL K +TWI
Sbjct: 373 QTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWI 432
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
VP L GGE KSEKAR+RKGI+IL+ TPGRL+DH HT + K +K++ L+LDEADR+L+
Sbjct: 433 VPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLE 492
Query: 557 QGYERDIAEFLEILKKQK--------PQFQSILLSATLTPAVQRLAGMTLQNPIQIDAAD 608
GYERD+ + +E + KQ+ PQ Q +LLSATLT VQ+LAG+TL+NP+ ID +D
Sbjct: 493 LGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSD 552
Query: 609 --------STDIH--------------------NTTDSLVIPDSLKQHFIVTPPKLRLVA 640
S D + + T L IP++L+ ++V PPKLRLVA
Sbjct: 553 EAASAALKSKDGYQKETIEALLEVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 612
Query: 641 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLG------------------ 682
L+S + + ++ K +VFM+T +M ++H ++L+ L
Sbjct: 613 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEEDEQEKGDSDDD 670
Query: 683 ------ENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYT 736
+ + FFKLHGSM+Q+ER VF+ FR S VL+ TDV RG+D+P + +VQYT
Sbjct: 671 GDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYT 730
Query: 737 APSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLS 796
P ++ D+VHRVGRTAR G +G ++LFL PSE + V L+ +RIRI++ + LQ LL
Sbjct: 731 PPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRIQQGDMYAYLQTLLP 790
Query: 797 VKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRH 856
+ D +R V+ AA+ LQ F++ + + LH +CK + SW++FY+++ K+L+
Sbjct: 791 ---KDDEAR----TVQEAASNLQHKFQTLLEDDRELHDKSCKAFVSWMKFYSTFPKELKP 843
Query: 857 IFNFKQIHLGHFAKSFALRDAPS 879
IFN + H+GHFAKSFAL++APS
Sbjct: 844 IFNVRIAHMGHFAKSFALKEAPS 866
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 205/338 (60%), Gaps = 43/338 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
++I ++T+VQQ +I +L G DVLVRSQTGSGKTLAYA+P+++ LQ+ +P+I RKDG+ A
Sbjct: 346 LSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLA 405
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL +QT E+ KL K +TWIVP L GGE KSEKAR+RKGI+IL+ TPGRL+
Sbjct: 406 LVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLV 465
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK--------PQFQSIL 172
DH HT + K +K++ L+LDEADR+L+ GYERD+ + +E + KQ+ PQ Q +L
Sbjct: 466 DHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRML 525
Query: 173 LSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSV 232
LSATLT TLK L +D +D E K K +Q
Sbjct: 526 LSATLTSQVQQLAGL-TLK----NPLYIDNSD------------EAASAALKSKDGYQKE 568
Query: 233 LLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVA 292
+ A L ++D + T L IP++L+ ++V PPKLRLVA
Sbjct: 569 TIEALL----------------EVDDGLGEYQEDVTGVLSIPENLQLSYVVVPPKLRLVA 612
Query: 293 LASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
L+S + + ++ K +VFM+T +M ++H ++L+
Sbjct: 613 LSSLLAKEVD--ASPKQFKAIVFMSTTEMVNFHHDMLN 648
>sp|Q7XJN0|RH17_ARATH DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana
GN=RH17 PE=2 SV=1
Length = 609
Score = 359 bits (922), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 312/571 (54%), Gaps = 69/571 (12%)
Query: 385 ALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTL 444
LFA S+ G+ + L E M T VQ +I IL G DVLV + TG+GKT+
Sbjct: 24 GLFASCSFSSL-GLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTI 82
Query: 445 AYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGG 504
AY P+I LQ PK+ R G +A++I+PTREL LQ E KL F WIVP ++ GG
Sbjct: 83 AYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGG 142
Query: 505 EKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIA 564
EK EKAR+RKGISIL+ATPGRLLDH K+T + + ++ DEAD IL+ GY ++I
Sbjct: 143 EKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIE 202
Query: 565 EFLEILKKQKP-------------QFQSILLSATLTPAVQRLAGMTLQNPIQID------ 605
+ +++L + Q Q++LLSATL V LA ++L +P+ I
Sbjct: 203 QIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKL 262
Query: 606 ---------AADSTDIHNT-----------TDSLVIPDSLKQHFIVTPPKLRLVALASFI 645
AA +D + ++ IP L Q ++ P RLVAL S +
Sbjct: 263 QQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVL 322
Query: 646 LGKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVL----------GENIAF-----FK 689
+N+ E E S K++VF +T+D D+H LLS G F F+
Sbjct: 323 ----KNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFR 378
Query: 690 LHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVG 749
LHGSM Q +R F TF++ K VL+ TDVAARGLD P V I+QY P +T+YVHRVG
Sbjct: 379 LHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVG 438
Query: 750 RTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
RTAR+G +G +LLFL P E+ ++EL+ + E L L + G++ R+
Sbjct: 439 RTARIGEKGEALLFLQPIEIDYLKELKKHGASLTEYPLMKVLDKF---PIPGNMPRIKKV 495
Query: 810 -NVETA--ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLG 866
++E+ +LQ + ES + + + A + SWVR YA++ +L+ IF K++HLG
Sbjct: 496 LSLESHPWVISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLG 555
Query: 867 HFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
H AKSFALR+ PS+ +GK +KE +K K+
Sbjct: 556 HVAKSFALREQPSL---VGKSHHKETMKRKR 583
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 176/357 (49%), Gaps = 79/357 (22%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T VQ +I IL G DVLV + TG+GKT+AY P+I LQ PK+ R G +A
Sbjct: 48 MGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFA 107
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I+PTREL LQ E KL F WIVP ++ GGEK EKAR+RKGISIL+ATPGRLL
Sbjct: 108 LVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLL 167
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH K+T + + ++ DEAD IL+ GY ++I + +++L + +
Sbjct: 168 DHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNE------------- 214
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
QG E DI + Q Q++LLSATL
Sbjct: 215 ----------------------------QGEEDDIV-------PKGIQKQNLLLSATLND 239
Query: 241 AVQRLAGMTLQNPIQID---------------AADSTDIHNT-----------TDSLVIP 274
V LA ++L +P+ I AA +D + ++ IP
Sbjct: 240 KVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIP 299
Query: 275 DSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES-KMLVFMATQDMADYHTELLS 330
L Q ++ P RLVAL S + +N+ E E S K++VF +T+D D+H LLS
Sbjct: 300 SQLVQRYLRVPCGARLVALLSVL----KNLFEREASQKVVVFFSTRDAVDFHYSLLS 352
>sp|O60173|DBP7_SCHPO ATP-dependent RNA helicase dbp7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp7 PE=3 SV=1
Length = 709
Score = 343 bits (880), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 307/558 (55%), Gaps = 60/558 (10%)
Query: 384 EALFAPTSYEEFPGIH--PFMKKNLNEGMNITQVTTVQQLSIQPIL--DGGDVLVRSQTG 439
EA AP F G+ + +LN MNI+ T +Q + +L D D + +QTG
Sbjct: 129 EASNAPIKTTNFAGVQLDTQLADHLNNKMNISAPTAIQSCCLPALLNTDDKDAFIEAQTG 188
Query: 440 SGKTLAYAIPIIQKLQEMRPKI-SRKDGIYAVIILPTRELALQTLEIFTKLCKS--FTWI 496
SGKTLAY +PI+Q+L + + +R GIYAVI+ PTREL Q + KL + WI
Sbjct: 189 SGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPLSHWI 248
Query: 497 VPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILD 556
V + GGEK KSEKARIRKG++IL+ TPGRL DH ++TE L S+V +VLDE DR++D
Sbjct: 249 VSCNVIGGEKKKSEKARIRKGVNILIGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMD 308
Query: 557 QGYERDIAEFLEILKKQKPQFQ----------SILLSATLTPAVQRLAGMTLQNPIQIDA 606
G+E + + L L+ Q + ++L SAT+ V+RL+ L++ + +
Sbjct: 309 MGFEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVKRLSDSALKDALYLK- 367
Query: 607 ADSTDIHNTTDSLV-IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
S+ + T D P+ L Q ++V PPKLRLV+L + + ++ K+++F++
Sbjct: 368 --SSIVEETNDGYSQAPEQLLQRYVVVPPKLRLVSLVALLRSHVRSY-----KKIIIFLS 420
Query: 666 TQDMADYHTELLSTVL----------------GENIA------------FFKLHGSMSQS 697
D D+H E + G+ I+ ++LHGS+SQ
Sbjct: 421 CSDSVDFHFEAFRCAINADEMEEAVKEKPDSEGDIISNAPALRIDGKSNVYRLHGSLSQQ 480
Query: 698 ERTEVFKTFRSVK---SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV 754
RT F S + S +L+CTDVAARGLDLP VD +VQY AP S+ DY+HR+GRTAR
Sbjct: 481 IRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLHRIGRTARA 540
Query: 755 GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA 814
GH G++++FL+P E + + L++ + ++ + LLS + D +
Sbjct: 541 GHNGAAIMFLLPKESEYINLLKS-SVSANILEQPNGPSGLLSAGFSQGKTNTND--WQDR 597
Query: 815 ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
AT Q+ E +L+ + + A + +TS+VR YA++ R IFN + +HLGH AKSFAL
Sbjct: 598 ATEWQLELERFILENEPMRNIAKRAFTSYVRAYATHLSSERSIFNMRDLHLGHIAKSFAL 657
Query: 875 RDAPSVISGIGKPKNKEE 892
R+AP ISG K +++
Sbjct: 658 REAPGKISGANSSKPRKQ 675
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 1 MNITQVTTVQQLSIQPIL--DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI-SRKDG 57
MNI+ T +Q + +L D D + +QTGSGKTLAY +PI+Q+L + + +R G
Sbjct: 157 MNISAPTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSG 216
Query: 58 IYAVIILPTRELALQTLEIFTKLCKS--FTWIVPSWLTGGEKMKSEKARIRKGISILVAT 115
IYAVI+ PTREL Q + KL + WIV + GGEK KSEKARIRKG++IL+ T
Sbjct: 217 IYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIGT 276
Query: 116 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQ 164
PGRL DH ++TE L S+V +VLDE DR++D G+E + + L L+ Q
Sbjct: 277 PGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQ 325
>sp|Q0DLB9|RH17_ORYSJ DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp.
japonica GN=Os05g0110500 PE=2 SV=2
Length = 591
Score = 333 bits (855), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 298/551 (54%), Gaps = 57/551 (10%)
Query: 384 EALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKT 443
E LFA S+ + G+HP + +L + M T +Q +I + G +LV++ TG+GKT
Sbjct: 17 EGLFASCSFTDL-GLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKT 75
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LAY PI+ LQ P++ R DG +A++++PTREL LQ I +L F W+VP ++ G
Sbjct: 76 LAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMG 135
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDI 563
GE EKAR+RKGISIL+ATPGRLLDH +HT + + + +V DEAD IL+ G+ + +
Sbjct: 136 GENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKAL 195
Query: 564 AEFLEIL-----------KKQKP-QFQSILLSATLTPAVQRLAGMTLQNPIQI------- 604
+ LE L K +P + Q++LLSATL V RLA ++L+NP+ I
Sbjct: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
Query: 605 -------------DAADSTDIHNTT-----DSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
D + + HN T D +P L Q ++ RL L + +
Sbjct: 256 SAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTIL- 314
Query: 647 GKCQNVNEDEES-KMLVFMATQDMADYHTELLSTVLGE--------------NIAFFKLH 691
+++ E + S K++VF++T D D+H +LS + + F+LH
Sbjct: 315 ---KSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLH 371
Query: 692 GSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRT 751
G+M Q +R + F F S KS +L+ TDVAARGLD P V I+QY +P +++YVHRVGRT
Sbjct: 372 GNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRT 431
Query: 752 ARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNV 811
AR+G +G +LLFL P E + +L+ + E L+ L + + ++
Sbjct: 432 ARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDM 491
Query: 812 ETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKS 871
+LQ + ES V + A + SWVR Y ++ +L+ IF K++HLGH A+S
Sbjct: 492 HPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARS 551
Query: 872 FALRDAPSVIS 882
F L++ PS++
Sbjct: 552 FGLKEQPSLLG 562
Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +Q +I + G +LV++ TG+GKTLAY PI+ LQ P++ R DG +A
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFA 101
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++++PTREL LQ I +L F W+VP ++ GGE EKAR+RKGISIL+ATPGRLL
Sbjct: 102 LVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLL 161
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL-----------KKQKP-QF 168
DH +HT + + + +V DEAD IL+ G+ + + + LE L K +P +
Sbjct: 162 DHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKR 221
Query: 169 QSILLSATLT 178
Q++LLSATL
Sbjct: 222 QNLLLSATLN 231
>sp|Q6C835|DBP7_YARLI ATP-dependent RNA helicase DBP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP7 PE=3 SV=1
Length = 799
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 200/560 (35%), Positives = 321/560 (57%), Gaps = 59/560 (10%)
Query: 409 GMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
GM + + T +Q+ +I ++ D+ V++QTGSGKTLA+ +P+++++ +SR+ G+
Sbjct: 250 GMQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAFVLPVLERIMSC-DDVSRETGL 308
Query: 468 YAVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 526
+AVI+ PTREL Q + LC K+ WIVP + GGEK KSEKARIRKG++ILVATPG
Sbjct: 309 FAVILTPTRELTTQIYSVLETLCRKACPWIVPGIVIGGEKKKSEKARIRKGVNILVATPG 368
Query: 527 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL----------------EIL 570
RL DH +TE L S+V +VLDE DR+++ G+E I + L +I
Sbjct: 369 RLADHFDNTEALDLSQVRWVVLDEGDRLMELGFEETITKILRTIEWKSVLRGENYLKDIP 428
Query: 571 KKQKP---QFQSILLSATLTPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSL 625
K KP + ++L SAT+ V L TL++ + D+ + + ++ P L
Sbjct: 429 KNLKPLPSRRVTVLCSATMKGGVTELGKSTLKDADWVSNDSVEDALAETSVETFSAPSQL 488
Query: 626 KQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLST------ 679
Q ++V P KLRLV L + G +E +K++VF++ D D+H ++LS
Sbjct: 489 VQEWVVVPAKLRLVTLLGALRGDILQSSEKTNTKVIVFLSCSDSVDFHFDVLSRDGSQIN 548
Query: 680 ---------VLGENI--AFFKLHGSMSQSERTEVFKTF-RSVKSGVLICTDVAARGLDLP 727
+L +++ + +KLHGS+SQ RT +F ++ +L+CTDVA+RGLDLP
Sbjct: 549 KMDTAKTAPLLLDDVSTSVYKLHGSLSQQARTATLASFAKNSTPSILLCTDVASRGLDLP 608
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIP-SEVKLVEELQNRRIRIEEIK 786
+ +++Y P S D++HRVGRTAR G +G +LLFL+P +E VE+L+ +++K
Sbjct: 609 KITHVIEYDPPFSIEDHLHRVGRTARAGQDGRALLFLLPGAEEGYVEKLKQS----QQMK 664
Query: 787 LKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRF 846
K +N+L+ G + AAT + E VL + A +G+TS +R
Sbjct: 665 -KTTYENILAAGFGGK-------GWDFAATNYHLDVERWVLGDETALDRARRGFTSHIRA 716
Query: 847 YASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELK-NKKMAINKEKS 905
YA++ + +FN + +HLGH AKSFALR+AP +GK K+ E++K NK ++++ ++
Sbjct: 717 YATHIAAEKDMFNVRMLHLGHLAKSFALREAP---GKLGKKKDPEKIKVNKDGSLDETQA 773
Query: 906 FKQRGNFSKKQMLSEFDSGL 925
K+ + S+K + + +S +
Sbjct: 774 RKKMLDRSRKHVYNSGESAM 793
Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 181/334 (54%), Gaps = 47/334 (14%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 59
M + + T +Q+ +I ++ D+ V++QTGSGKTLA+ +P+++++ +SR+ G++
Sbjct: 251 MQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAFVLPVLERIMSC-DDVSRETGLF 309
Query: 60 AVIILPTRELALQTLEIFTKLC-KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
AVI+ PTREL Q + LC K+ WIVP + GGEK KSEKARIRKG++ILVATPGR
Sbjct: 310 AVILTPTRELTTQIYSVLETLCRKACPWIVPGIVIGGEKKKSEKARIRKGVNILVATPGR 369
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
L DH +TE L S+V +VLDE DR+++ G+E I + L + +++S+L
Sbjct: 370 LADHFDNTEALDLSQVRWVVLDEGDRLMELGFEETITKILRTI-----EWKSVLRG---- 420
Query: 179 PATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATL 238
+ Y +DI + L+ L ++ +VL SAT+
Sbjct: 421 ------------------------------ENYLKDIPKNLKPLPSRR---VTVLCSATM 447
Query: 239 TPAVQRLAGMTLQNP--IQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
V L TL++ + D+ + + ++ P L Q ++V P KLRLV L
Sbjct: 448 KGGVTELGKSTLKDADWVSNDSVEDALAETSVETFSAPSQLVQEWVVVPAKLRLVTLLGA 507
Query: 297 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
+ G +E +K++VF++ D D+H ++LS
Sbjct: 508 LRGDILQSSEKTNTKVIVFLSCSDSVDFHFDVLS 541
>sp|A3LWH3|DBP7_PICST ATP-dependent RNA helicase DBP7 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DPB7 PE=3 SV=2
Length = 733
Score = 319 bits (818), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 219/630 (34%), Positives = 329/630 (52%), Gaps = 82/630 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALFAPT-------SYEEFPGIHPFMKKNLNEGMNIT 413
+SSLF +N + + K E + P+ S E GI+ + K+L E +
Sbjct: 109 VSSLFTSNQSSSQL--KVTKESDEKTYLPSNAPVEDASTFEGLGINERLSKHLTETLRFK 166
Query: 414 QVTTVQQLSIQPILDGG-DVLVRSQTGSGKTLAYAIPIIQKLQ-EMRPKISRKDGIYAVI 471
T VQ+ I +L D+ +++QTGSGKTL++ +PI KL E + KI+R G++AVI
Sbjct: 167 NPTKVQKSVIPTMLSTERDLFIKAQTGSGKTLSFLLPIFHKLMMENKHKINRDSGLFAVI 226
Query: 472 ILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDH 531
+ PTRELA Q + L + + IVP + GGEK KSEKARIRKG++ILV TPGRL DH
Sbjct: 227 LTPTRELATQIYGVLETLTRCYHHIVPGIVIGGEKKKSEKARIRKGVNILVGTPGRLADH 286
Query: 532 CKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS------------ 579
++TE+L S++ L+LDE D++++ G+E I + ++ + +S
Sbjct: 287 MENTESLDISQLRWLILDEGDKLVELGFEETITKITNLITRNSQIMESMHKWQGLPVRRI 346
Query: 580 -ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRL 638
+L SAT+ V++L + L NP I S+ H ++ + PD L Q+ +V PPKLRL
Sbjct: 347 NLLCSATMQNNVEKLGSIILNNPEMISDGSSSGKH--SEEVTAPDQLIQNVVVVPPKLRL 404
Query: 639 VALASFILGKCQN--VNEDEESKMLVFMATQDMADYHTEL------------------LS 678
V L++ IL K + + ++ +VF + D ++H ++ L
Sbjct: 405 VTLSA-ILKKISSDMSGTNNSTRTIVFFSCSDSVNFHFDVFTRGGNTFKKVKNDESGKLE 463
Query: 679 TV--------LGENIAFFKLHGSMSQSERTEVFKTF-RSVKSG--VLICTDVAARGLDLP 727
TV +G+ A +KLHGS+SQ RT + F + KS +L CTDVA+RGLDLP
Sbjct: 464 TVEVENDTPLIGQGTAVYKLHGSLSQQTRTSTLQAFIKDSKSNHSILFCTDVASRGLDLP 523
Query: 728 LVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS--EVKLVEELQ-------NR 778
+ +++Y P + D++HR+GR+ARVG EG++ LFL+P E + +LQ N
Sbjct: 524 NIASVIEYDPPFTIDDHLHRIGRSARVGKEGTATLFLLPGNEEGYVDGKLQVVHPKEGNL 583
Query: 779 RIRIEEIKLKDCL---QNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTS 835
RI E LKD N K + + +G + AT + E +L+ H
Sbjct: 584 RIVNYENYLKDGFSAKSNNEDTKKKSKDPKSREGKWDIHATTWHLDIERWLLEDSGAHDK 643
Query: 836 ACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAP----------SVISGIG 885
A + +TS +R YA++ R+ FN K +HLGH AKSF LR+ P S I G
Sbjct: 644 AVQAFTSHIRAYATHLSSERNYFNVKLLHLGHLAKSFGLRETPKKLGKSVESNSGIQGAS 703
Query: 886 KPKNKEELKNK--KMAINKEKSFKQRGNFS 913
K KE+ + K +MA KS N+S
Sbjct: 704 KKTKKEDPRKKMLRMAKMALKSNSDEFNYS 733
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 150/268 (55%), Gaps = 15/268 (5%)
Query: 22 DVLVRSQTGSGKTLAYAIPIIQKLQ-EMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 80
D+ +++QTGSGKTL++ +PI KL E + KI+R G++AVI+ PTRELA Q + L
Sbjct: 185 DLFIKAQTGSGKTLSFLLPIFHKLMMENKHKINRDSGLFAVILTPTRELATQIYGVLETL 244
Query: 81 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 140
+ + IVP + GGEK KSEKARIRKG++ILV TPGRL DH ++TE+L S++ L+LD
Sbjct: 245 TRCYHHIVPGIVIGGEKKKSEKARIRKGVNILVGTPGRLADHMENTESLDISQLRWLILD 304
Query: 141 EADRILDQGYERDIAEFLEILKKQKPQFQSI--LLSATLTPATCWCKHTETLKFSKVEHL 198
E D++++ G+E I + ++ + +S+ + C T K+ +
Sbjct: 305 EGDKLVELGFEETITKITNLITRNSQIMESMHKWQGLPVRRINLLCSATMQNNVEKLGSI 364
Query: 199 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQNPIQIDA 258
+L+ + I D +E E+ + ++ + + P RL +TL ++ +
Sbjct: 365 ILNNPEMISDGSSSGKHSE--EVTAPDQ-----LIQNVVVVPPKLRL--VTLSAILKKIS 415
Query: 259 ADSTDIHNTTDSLVI---PDSLKQHFIV 283
+D + +N+T ++V DS+ HF V
Sbjct: 416 SDMSGTNNSTRTIVFFSCSDSVNFHFDV 443
>sp|Q59S50|DBP7_CANAL ATP-dependent RNA helicase DBP7 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP7 PE=3 SV=1
Length = 727
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 335/644 (52%), Gaps = 99/644 (15%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVS---EALFAPTSY-----EEFPGI--HPFMKKNLNEGM 410
+SSLF NN PT L P S E + P++ F G+ + + +L + +
Sbjct: 100 VSSLFTNNQ-----PTSHLAPTSTTKELTYLPSNAPMKDATNFSGLGLNEKLSIHLTDHL 154
Query: 411 NITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIY 468
T +QQL I ++ D+ V++QTGSGKTLA+ +PI KL +E + KI+R+ G++
Sbjct: 155 RFMHPTKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLF 214
Query: 469 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 528
A+I+ PTRELA Q + L + WIVP + GGEK KSEKAR+RKG +ILVATPGRL
Sbjct: 215 AIILTPTRELATQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILVATPGRL 274
Query: 529 LDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQK------PQFQ---- 578
DH ++T+TL S++ LVLDE D++++ G+E IA+ + ++Q
Sbjct: 275 ADHLENTKTLDISQLRWLVLDEGDKLMELGFEDTIAQITAKIDSNSKIADTAEKWQGLPS 334
Query: 579 ---SILLSATLTPAVQRLAGMTLQNP--IQIDAAD-----STDIHNTTDSLVIPDSLKQH 628
++L SATL V++L + L++P I ++ A S D T + PD L Q+
Sbjct: 335 RRINMLCSATLHSNVKKLGSIVLKDPEMISVETASVAGTVSFDETIATTTSTAPDQLIQN 394
Query: 629 FIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS---------- 678
+V PPKLRLV L + +L +++ + +VF + D D+H ++ +
Sbjct: 395 VVVVPPKLRLVTLDALLL----KISKHSAERTIVFFSCSDSVDFHFDVFTRDGKKFKKVT 450
Query: 679 --------TV-----------------LGENIAFFKLHGSMSQSERTEVFKTF---RSVK 710
TV L +N +KLHGS+SQ R ++F +
Sbjct: 451 DEETGEVKTVLVSPEDDENDGLLTAPQLSDNTIIYKLHGSLSQQTRASTLQSFVKDNNSY 510
Query: 711 SGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSEVK 770
+ +L CTDVA+RGLDLP V +++Y P + D++HR+GR+AR+G+EG++ LFL+P
Sbjct: 511 NKILFCTDVASRGLDLPNVANVIEYDPPFTIDDHLHRIGRSARLGNEGNATLFLLPG--- 567
Query: 771 LVEELQNRRIRIEEIKLKDC-LQNLLSVKMEGDLSRLADGNVETA----------ATALQ 819
+ E + ++R+ + + ++N + EG A GN+++ AT
Sbjct: 568 IEEGYVDGKLRVAHPREGNLRVKNYEKILQEG----FAQGNIKSKDNKLGKWDIHATTWH 623
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
+ E +L+ + H A + +TS +R YA++ R FN K +HLGH AKSF LR+ P
Sbjct: 624 LDVERWLLEDQASHDEAVRAFTSHIRAYATHLSSEREFFNVKLLHLGHLAKSFGLRETPK 683
Query: 880 VIS-GIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ +G N E K K ++K + + K SEF+
Sbjct: 684 KLGKSVGNNSNYSESKKGKKEDPRKKMLRM-AKMAVKSASSEFN 726
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 185/344 (53%), Gaps = 62/344 (18%)
Query: 7 TTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKL-QEMRPKISRKDGIYAVIIL 64
T +QQL I ++ D+ V++QTGSGKTLA+ +PI KL +E + KI+R+ G++A+I+
Sbjct: 160 TKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLFAIILT 219
Query: 65 PTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCK 124
PTRELA Q + L + WIVP + GGEK KSEKAR+RKG +ILVATPGRL DH +
Sbjct: 220 PTRELATQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHLE 279
Query: 125 HTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPATCWC 184
+T+TL S++ LVLDE D++++ G+E IA+
Sbjct: 280 NTKTLDISQLRWLVLDEGDKLMELGFEDTIAQI--------------------------- 312
Query: 185 KHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQR 244
T K +D +I D AE + L ++ ++L SATL V++
Sbjct: 313 ----TAK--------IDSNSKIA------DTAEKWQGLPSRRI---NMLCSATLHSNVKK 351
Query: 245 LAGMTLQNP--IQIDAAD-----STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFI 297
L + L++P I ++ A S D T + PD L Q+ +V PPKLRLV L + +
Sbjct: 352 LGSIVLKDPEMISVETASVAGTVSFDETIATTTSTAPDQLIQNVVVVPPKLRLVTLDALL 411
Query: 298 LGKCQNVNEDEESKMLVFMATQDMADYHTELLSTK-KKIKKLKE 340
L +++ + +VF + D D+H ++ + KK KK+ +
Sbjct: 412 L----KISKHSAERTIVFFSCSDSVDFHFDVFTRDGKKFKKVTD 451
>sp|Q0CF43|DBP7_ASPTN ATP-dependent RNA helicase dbp7 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp7 PE=3 SV=2
Length = 769
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 209/633 (33%), Positives = 320/633 (50%), Gaps = 93/633 (14%)
Query: 361 ISSLFQNNPDIPNV-------PTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNIT 413
ISSLF NP N P KP + L G+ P + +L + +
Sbjct: 105 ISSLFSKNPLPRNAEEPTDEAPAEDAKPTNAPLIDGLDTFTNLGLSPTLAAHLLTKLELK 164
Query: 414 QVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----------------Q 455
T +Q+ SI +L + D ++++TGSGKTLAY +P++Q++
Sbjct: 165 APTAIQKASISQLLKEESDAFIQAETGSGKTLAYLLPLVQRIMALSHPTNRTDATSTTDA 224
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
E +P + R G++A+++ PTREL Q + L + WIV + GGEK KSEKAR+R
Sbjct: 225 EGQPVVHRDSGLFAIVLAPTRELCKQISVVLEGLLRCAHWIVAGTVIGGEKKKSEKARLR 284
Query: 516 KGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQK 574
KG++ILVATPGRL DH ++T+ L S V LVLDE DR+++ G+E+++ ++ L +Q+
Sbjct: 285 KGLNILVATPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEQELQGIIKKLDARQR 344
Query: 575 P--------QFQSILLSATLTPAVQRLAGMTLQNPIQIDA------ADSTDIHNTTDSLV 620
P + +IL SATL VQ+L M+L++ I I A D+ ++ +
Sbjct: 345 PSRIPGVPTKRTTILCSATLKMNVQKLGEMSLKDAIHIKADPADEDGDAKPKNDDESAFT 404
Query: 621 IPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTV 680
+P LKQ + + KLRLV L +F+ K + + K +VF++ D D+H E+ +
Sbjct: 405 VPAQLKQSYAIVAAKLRLVTLTAFL--KRTFMRKGSVMKAIVFVSCADSVDFHFEVFTRK 462
Query: 681 LGEN------------------------------------IAFFKLHGSMSQSERTEVFK 704
L ++ + +LHGS+ Q RT
Sbjct: 463 LQDSDENAEDSDASDTKEKPAAFTHNTIARATAFSNPSNPVTLHRLHGSLPQHVRTSTLA 522
Query: 705 TF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLF 763
+F R+ + VL+CTDVA+RGLDLP VD +++Y S+ D++HR+GRTAR+G +G +L+F
Sbjct: 523 SFARNKDASVLVCTDVASRGLDLPNVDLVIEYDPAFSAEDHLHRIGRTARLGRDGRALIF 582
Query: 764 LIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVET-------AAT 816
L P + E+ R R D + L + L R GNVE+ AT
Sbjct: 583 LQPGCEEGYVEILKRGYR-------DGGKALTRTNADDILKRGFGGNVESENKDWEEKAT 635
Query: 817 ALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRD 876
QM E L++ A + Y S +R YA++ R +FN K++HLGH AK+FALRD
Sbjct: 636 DWQMDLERWALEKPESLEMARRAYQSHIRAYATHVASERSMFNIKELHLGHLAKAFALRD 695
Query: 877 APSVISGIGKPKNKEELKNKKMAINKEKSFKQR 909
PS I+ G + K++ K A + K+R
Sbjct: 696 RPSKINVPGLRQGKDDTKKDYKAARAPAAGKKR 728
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 152/292 (52%), Gaps = 36/292 (12%)
Query: 7 TTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKL-----------------QEM 48
T +Q+ SI +L + D ++++TGSGKTLAY +P++Q++ E
Sbjct: 167 TAIQKASISQLLKEESDAFIQAETGSGKTLAYLLPLVQRIMALSHPTNRTDATSTTDAEG 226
Query: 49 RPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 108
+P + R G++A+++ PTREL Q + L + WIV + GGEK KSEKAR+RKG
Sbjct: 227 QPVVHRDSGLFAIVLAPTRELCKQISVVLEGLLRCAHWIVAGTVIGGEKKKSEKARLRKG 286
Query: 109 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKP- 166
++ILVATPGRL DH ++T+ L S V LVLDE DR+++ G+E+++ ++ L +Q+P
Sbjct: 287 LNILVATPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEQELQGIIKKLDARQRPS 346
Query: 167 -------QFQSILLSATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 219
+ +IL SATL + + H+ D AD D + D
Sbjct: 347 RIPGVPTKRTTILCSATL---KMNVQKLGEMSLKDAIHIKADPADEDGDAKPKNDDESAF 403
Query: 220 EILKKQKPQFQSV---LLSATLTPAVQRL---AGMTLQNPIQIDAADSTDIH 265
+ + K + V L TLT ++R G ++ + + ADS D H
Sbjct: 404 TVPAQLKQSYAIVAAKLRLVTLTAFLKRTFMRKGSVMKAIVFVSCADSVDFH 455
>sp|A1CB55|DBP7_ASPCL ATP-dependent RNA helicase dbp7 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp7 PE=3 SV=1
Length = 755
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 317/611 (51%), Gaps = 88/611 (14%)
Query: 361 ISSLFQNNPDIPNV-------PTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNIT 413
ISSLF NP+ NV P KP + L G+ P + +L + +
Sbjct: 99 ISSLFTKNPEPKNVEEVKEEGPVEEAKPTNAPLIDGLDTFTNLGLSPSLAAHLLTKLELK 158
Query: 414 QVTTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---------RPKISR 463
T +Q+ SI +L + GD ++++TGSGKTLAY +P++Q++ + +P + R
Sbjct: 159 APTAIQKASISQLLKEDGDAFIQAETGSGKTLAYLLPLVQRIMTLSKPTTDATGQPIVHR 218
Query: 464 KDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
G++A+++ PTREL Q + L + WIV + GGEK KSEKAR+RKG++ILVA
Sbjct: 219 DSGLFAIVLAPTRELCKQISVVLESLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVA 278
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKP------- 575
TPGRL DH ++T+ L S V LVLDE DR+++ G+E +I ++ L +Q+P
Sbjct: 279 TPGRLADHLENTKVLDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGIP 338
Query: 576 -QFQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTD-------IHNTTDSLV-IPDSLK 626
+ ++L SAT+ VQ+L ++L++ + I AD D + DS +P LK
Sbjct: 339 TKRTTVLCSATMKMNVQKLGEISLKDAVHI-KADPEDEDEKARLANKEEDSAYRVPAQLK 397
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLS-------- 678
Q + V KLRLV L +++ K + + K +VF++ D D+H E+ +
Sbjct: 398 QSYAVVAAKLRLVTLTAYL--KRTFMRKGSVMKTIVFVSCADSVDFHFEVFTRKKQQTDD 455
Query: 679 -----------------TVLGENIAF---------FKLHGSMSQSERTEVFKTF-RSVKS 711
+ AF ++LHGS+ Q+ RT +F ++ +
Sbjct: 456 ADASDEEKTEEKPLSPHGTIAPATAFSNPSNPVTLYRLHGSLPQNVRTSTLASFAKNREP 515
Query: 712 GVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVK 770
VLICTDVA+RGLDLP VD +V+Y S+ D++HR+GRTARVG +G +L+FL+P E
Sbjct: 516 SVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTARVGRDGRALVFLMPGCEEN 575
Query: 771 LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETA-------ATALQMSFE 823
VE L+ +D + L V L R GNVE AT Q E
Sbjct: 576 YVEILKR--------GYRDGGKALTRVDANDILKRGFGGNVEAGKKDWDVKATDWQCEVE 627
Query: 824 SAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISG 883
L+ A + + S +R YA++ R +FN K++HLGH AK+FALRD PS I+
Sbjct: 628 RWSLENPQYLEMARRAFQSHIRAYATHIAAERSMFNIKELHLGHLAKAFALRDRPSKINV 687
Query: 884 IGKPKNKEELK 894
G + KEE K
Sbjct: 688 PGLRQGKEETK 698
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 169/339 (49%), Gaps = 59/339 (17%)
Query: 7 TTVQQLSIQPIL-DGGDVLVRSQTGSGKTLAYAIPIIQKLQEM---------RPKISRKD 56
T +Q+ SI +L + GD ++++TGSGKTLAY +P++Q++ + +P + R
Sbjct: 161 TAIQKASISQLLKEDGDAFIQAETGSGKTLAYLLPLVQRIMTLSKPTTDATGQPIVHRDS 220
Query: 57 GIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
G++A+++ PTREL Q + L + WIV + GGEK KSEKAR+RKG++ILVATP
Sbjct: 221 GLFAIVLAPTRELCKQISVVLESLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATP 280
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK-KQKPQFQSILLSA 175
GRL DH ++T+ L S V LVLDE DR+++ G+E +I ++ L +Q+P S +
Sbjct: 281 GRLADHLENTKVLDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRP---SRIPGI 337
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
T C T + K+ + L +A I K P+ +
Sbjct: 338 PTKRTTVLCSATMKMNVQKLGEISLKDAVHI-----------------KADPEDED---- 376
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
RLA + ++ P LKQ + V KLRLV L +
Sbjct: 377 -----EKARLANKEEDSAYRV-----------------PAQLKQSYAVVAAKLRLVTLTA 414
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTKKK 334
++ K + + K +VF++ D D+H E+ + KK+
Sbjct: 415 YL--KRTFMRKGSVMKTIVFVSCADSVDFHFEVFTRKKQ 451
>sp|Q754J2|DBP7_ASHGO ATP-dependent RNA helicase DBP7 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP7
PE=3 SV=1
Length = 710
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 299/562 (53%), Gaps = 68/562 (12%)
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQ 455
G+ + ++L M I + T +Q+++I +L+G D+ + +QTGSGKTLA+ +P++Q L
Sbjct: 140 GVRGTLLEHLTGKMKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPVLQTLL 199
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
+ +I R G +A+I+ PTRELA Q + + L + ++VP L GGE+ KSEKAR+R
Sbjct: 200 SLEQRIDRHSGCFAMIVTPTRELAAQIYGVISTLAQCCHYLVPCLLVGGERKKSEKARLR 259
Query: 516 KGISILVATPGRLLDHCKHT----ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
KG + +V TPGR+LDH ++T E L S + +L+LDE D++++ G+E + LEI+
Sbjct: 260 KGANFIVGTPGRMLDHLQNTKVAREQLPHS-LRYLILDEGDKLMELGFEETLKSILEIVH 318
Query: 572 K---------QKPQ-FQSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVI 621
+ PQ +L SAT V +L + L +P I A+DST TD +
Sbjct: 319 SVACDNTRFPRLPQRIVHVLCSATRQGTVSKLGDIALTDPKVIAASDST-----TDVSTV 373
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
PD L Q + PPKLRLV L + I + + ++ +VF++ D D+H ++ S +
Sbjct: 374 PDQLLQKIAIVPPKLRLVTLCAAISELSRKAPTETTTRTIVFISCADSVDFHYDVFSGLG 433
Query: 682 GE----------------------------NIAFFKLHGSMSQSERTEVFKTFRSVKSG- 712
G N F+KLHGS+ Q+ R + F S +
Sbjct: 434 GSHRDLVPGTVRELAAGSRALPCFSADSPPNTVFYKLHGSLPQAVRVATLRHFSSDAAAT 493
Query: 713 -----VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS 767
VL CTDVA+RGLDLP V +++ P + D++HR+GRTAR G G SLLFL+P
Sbjct: 494 RGKHLVLFCTDVASRGLDLPRVSTVIEMDPPFAVEDHLHRIGRTARAGVAGESLLFLLPG 553
Query: 768 EVK-LVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSR------LADGNVETAATALQM 820
E + +E ++ R E+ D ++LL+ ++R D ++ AT +
Sbjct: 554 EEEGYMEHIRAHHPRGWELLRYD--RDLLAPAFAAPVARSDRPTTATDAAWDSNATTWHL 611
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ E VL+ A KGYTS +R YA++ + FN + +HLGH AK+F LR+ P
Sbjct: 612 NVERRVLEDPSAKDLAIKGYTSHIRAYATHISQEKRFFNVRCLHLGHLAKAFGLRERPKG 671
Query: 881 ISG-IGK---PKNKEELKNKKM 898
++ GK PK K++ KM
Sbjct: 672 MAAHRGKPATPKPKQDDARTKM 693
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 173/335 (51%), Gaps = 62/335 (18%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 59
M I + T +Q+++I +L+G D+ + +QTGSGKTLA+ +P++Q L + +I R G +
Sbjct: 153 MKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPVLQTLLSLEQRIDRHSGCF 212
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
A+I+ PTRELA Q + + L + ++VP L GGE+ KSEKAR+RKG + +V TPGR+
Sbjct: 213 AMIVTPTRELAAQIYGVISTLAQCCHYLVPCLLVGGERKKSEKARLRKGANFIVGTPGRM 272
Query: 120 LDHCKHT----ETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
LDH ++T E L S + +L+LDE D++++ G+E + LEI+
Sbjct: 273 LDHLQNTKVAREQLPHS-LRYLILDEGDKLMELGFEETLKSILEIVH------------- 318
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
+ C +T +F ++ ++ VL S
Sbjct: 319 -----SVACDNT---RFPRLPQRIV------------------------------HVLCS 340
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT V +L + L +P I A+DS TTD +PD L Q + PPKLRLV L +
Sbjct: 341 ATRQGTVSKLGDIALTDPKVIAASDS-----TTDVSTVPDQLLQKIAIVPPKLRLVTLCA 395
Query: 296 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLS 330
I + + ++ +VF++ D D+H ++ S
Sbjct: 396 AISELSRKAPTETTTRTIVFISCADSVDFHYDVFS 430
>sp|A7TNT1|DBP7_VANPO ATP-dependent RNA helicase DBP7 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP7 PE=3 SV=1
Length = 732
Score = 308 bits (788), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 311/602 (51%), Gaps = 76/602 (12%)
Query: 388 APTSYEEFPG--IHPFMKKNLNEGMNITQVTTVQQLSIQPILD--GGDVLVRSQTGSGKT 443
AP + + F I + +LNE M I + T++Q+L + +L D+ + +QTGSGKT
Sbjct: 139 APLAADNFDSLKIEQQLVNHLNEKMRIQKPTSIQKLVLPQLLSSKNNDLFIHAQTGSGKT 198
Query: 444 LAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTG 503
LA+A+PI+ K+ M+ ++ RK G +A+ I PTRELA Q + ++L ++VP L G
Sbjct: 199 LAFALPILSKILSMKTRVDRKSGCFAIFITPTRELATQIYHVLSELTNCCHYLVPCLLIG 258
Query: 504 GEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFS---KVEHLVLDEADRILDQGYE 560
GE KSEKAR+RKG + ++ TPGR+LDH ++T+++K + ++VLDEAD++++ G+E
Sbjct: 259 GESKKSEKARLRKGCNFIIGTPGRILDHFQNTQSVKEQLAVSLRYVVLDEADKLMELGFE 318
Query: 561 RDIAEFLEILKKQK------PQFQS----ILLSATLTPAVQRLAGMTLQNPIQIDAADST 610
+ + L+++ PQ S IL SAT +V +L + LQN I + T
Sbjct: 319 ETLTDILKLIHDISLNTSVYPQLPSRIMHILCSATSKGSVTKLGNVALQNYKMISNSHVT 378
Query: 611 DIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNE------DEESKMLVFM 664
N ++ +PD L Q + PPKLRLV LA+ + + E D S+ +VF+
Sbjct: 379 ---NELENATVPDQLLQKIAIVPPKLRLVTLAATLDSIHRKHIEQKKKKLDYVSRTVVFL 435
Query: 665 ATQDMADYHTELLST-------VLGENIAF---------------------FKLHGSMSQ 696
+ D ++H E S+ ++GE+ +KLHGS+SQ
Sbjct: 436 SCSDSVNFHFEAFSSSDANHRNLVGESARLLTKGNDILPSFDPENDPDFICYKLHGSLSQ 495
Query: 697 SERTEVFKTFRSVKSG------VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
R+ + F VL CTDVA+RGLDLP + +++ P + D++HR+GR
Sbjct: 496 QIRSSTLQHFSKTNENVKGKHLVLFCTDVASRGLDLPEIGTVIELDPPFAVEDHLHRIGR 555
Query: 751 TARVGHEGSSLLFLIPSE-------VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDL 803
TAR G G SLLFL+P E +K + + LK QN+ + + +
Sbjct: 556 TARAGKHGESLLFLLPGEEEGYMEYIKPYHTKGWKLVNYTNDLLKPSFQNVNVKRSDKET 615
Query: 804 SRLADGNVE---TAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNF 860
S+ NVE T AT ++ E VL+ A KGY S +R YA++ + FN
Sbjct: 616 SK----NVEEWDTNATTWHLNVERRVLEDSSFKDIAMKGYASHIRAYATHISKEKKFFNV 671
Query: 861 KQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSE 920
K +HLGH AKSFALR+ P + G+ KN E K K K F+ + KQ E
Sbjct: 672 KCLHLGHLAKSFALRERPKTM-GLQNTKNGGEAKKNSKESAKNKMFR-LARMAVKQSSGE 729
Query: 921 FD 922
F+
Sbjct: 730 FN 731
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 176/342 (51%), Gaps = 65/342 (19%)
Query: 1 MNITQVTTVQQLSIQPILD--GGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 58
M I + T++Q+L + +L D+ + +QTGSGKTLA+A+PI+ K+ M+ ++ RK G
Sbjct: 163 MRIQKPTSIQKLVLPQLLSSKNNDLFIHAQTGSGKTLAFALPILSKILSMKTRVDRKSGC 222
Query: 59 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 118
+A+ I PTRELA Q + ++L ++VP L GGE KSEKAR+RKG + ++ TPGR
Sbjct: 223 FAIFITPTRELATQIYHVLSELTNCCHYLVPCLLIGGESKKSEKARLRKGCNFIIGTPGR 282
Query: 119 LLDHCKHTETLKFS---KVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 175
+LDH ++T+++K + ++VLDEAD++++ G+E + + L+++ I L+
Sbjct: 283 ILDHFQNTQSVKEQLAVSLRYVVLDEADKLMELGFEETLTDILKLI-------HDISLNT 335
Query: 176 TLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLS 235
++ P S++ H +L S
Sbjct: 336 SVYPQLP----------SRIMH----------------------------------ILCS 351
Query: 236 ATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 295
AT +V +L + LQN I + T N ++ +PD L Q + PPKLRLV LA+
Sbjct: 352 ATSKGSVTKLGNVALQNYKMISNSHVT---NELENATVPDQLLQKIAIVPPKLRLVTLAA 408
Query: 296 FILGKCQNVNE------DEESKMLVFMATQDMADYHTELLST 331
+ + E D S+ +VF++ D ++H E S+
Sbjct: 409 TLDSIHRKHIEQKKKKLDYVSRTVVFLSCSDSVNFHFEAFSS 450
>sp|Q6CK32|DBP7_KLULA ATP-dependent RNA helicase DBP7 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP7 PE=3 SV=1
Length = 740
Score = 304 bits (778), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 198/604 (32%), Positives = 310/604 (51%), Gaps = 78/604 (12%)
Query: 347 NYEIPKKT----EVKSGPISSLFQNNPDIPNVPTRRLK------PVSEALFAPTSYEEFP 396
N E P + ++ S +SSLF ++ +I V S A +++ F
Sbjct: 96 NVEQPARVTQPLQLNSQIVSSLFTSSRNIDTVTNSNAHDEKAEVTYSNAPLVGDTFDSF- 154
Query: 397 GIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQ 455
GI M +LN M I++ T +Q+L I P L D+ + +QTGSGKTLA+ +PI Q +
Sbjct: 155 GITDTMVSHLNVKMKISKPTKIQKLVIPPFLQAQNDLFIHAQTGSGKTLAFLLPIFQSIL 214
Query: 456 EMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIR 515
+ I+R+ G +A+++ PTRELA Q ++ ++L + ++VP L GGE+ KSEKAR+R
Sbjct: 215 SLGQNITRQSGCFALVVTPTRELANQIYQVTSELAQCCHFLVPCLLIGGERKKSEKARLR 274
Query: 516 KGISILVATPGRLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK- 571
KG + ++ TPGR+LDH ++T+ +K + ++VLDE D++++ G+E + E L I+
Sbjct: 275 KGANFIIGTPGRVLDHLQNTKVIKEQLAPSLRYVVLDEGDKLMELGFEETLKEILNIIHG 334
Query: 572 -----KQKPQFQS----ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIP 622
Q P+ +L SAT+ V +L +TLQN I + T++ +P
Sbjct: 335 IDIDTHQFPKLPKRILHVLCSATVKGNVTKLGNVTLQNYKLISSG-----QKQTETTTVP 389
Query: 623 DSLKQHFIVTPPKLRLVALASFILGKCQ----NVNEDEESKMLVFMATQDMADYHTELLS 678
D L Q ++ PPKLRLV LA + Q ++ + ++ +VF++ D D+H E+ S
Sbjct: 390 DQLLQKIVIVPPKLRLVTLAGSLTTITQKHYKEGSKSDVTRTIVFLSCSDSVDFHYEVFS 449
Query: 679 TVLGE----------------------------NIAFFKLHGSMSQSERTEVFKTFRSVK 710
+ G N+ +KLHGS+SQ RT K F +
Sbjct: 450 SHDGNHRGLVGDTARLLTKGNSILPCFNDTDDPNVICYKLHGSLSQQTRTATLKHFATNN 509
Query: 711 SG------VLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFL 764
+L CTDVA+RGLDLP V +++ P + D++HR+GRTAR G EG SLLFL
Sbjct: 510 DATKGKHLILFCTDVASRGLDLPHVSTVIEMDPPFAVEDHLHRIGRTARAGCEGESLLFL 569
Query: 765 IPSE-------VKLVEELQNRRIRIEEIKLKDCLQNL---LSVKMEGDLSRLADGNVETA 814
+P E +K + + +E L+ + L + K + D + +
Sbjct: 570 LPGEEEGYMDYIKPYHPKGWKLLTYDEQVLRPAFEGLNVRRTDKKKEDWDKHEAQAWDNN 629
Query: 815 ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFAL 874
AT ++ E V++ A KGY S +R YA++ + FN K +HLGH AKSFAL
Sbjct: 630 ATTWHLNVERRVIEDSHFKELAVKGYMSHIRAYATHLSIEKKFFNLKCLHLGHLAKSFAL 689
Query: 875 RDAP 878
R+ P
Sbjct: 690 RERP 693
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 175/339 (51%), Gaps = 64/339 (18%)
Query: 1 MNITQVTTVQQLSIQPILDG-GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIY 59
M I++ T +Q+L I P L D+ + +QTGSGKTLA+ +PI Q + + I+R+ G +
Sbjct: 168 MKISKPTKIQKLVIPPFLQAQNDLFIHAQTGSGKTLAFLLPIFQSILSLGQNITRQSGCF 227
Query: 60 AVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRL 119
A+++ PTRELA Q ++ ++L + ++VP L GGE+ KSEKAR+RKG + ++ TPGR+
Sbjct: 228 ALVVTPTRELANQIYQVTSELAQCCHFLVPCLLIGGERKKSEKARLRKGANFIIGTPGRV 287
Query: 120 LDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
LDH ++T+ +K + ++VLDE D++++ G+E + E L I+
Sbjct: 288 LDHLQNTKVIKEQLAPSLRYVVLDEGDKLMELGFEETLKEILNII--------------- 332
Query: 177 LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSA 236
G + D +F ++ K+ VL SA
Sbjct: 333 --------------------------------HGIDIDTHQFPKLPKR----ILHVLCSA 356
Query: 237 TLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 296
T+ V +L +TLQN I + T++ +PD L Q ++ PPKLRLV LA
Sbjct: 357 TVKGNVTKLGNVTLQNYKLISSG-----QKQTETTTVPDQLLQKIVIVPPKLRLVTLAGS 411
Query: 297 ILGKCQ----NVNEDEESKMLVFMATQDMADYHTELLST 331
+ Q ++ + ++ +VF++ D D+H E+ S+
Sbjct: 412 LTTITQKHYKEGSKSDVTRTIVFLSCSDSVDFHYEVFSS 450
>sp|Q8TFL3|DBP7_CANGA ATP-dependent RNA helicase DBP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP7 PE=3 SV=1
Length = 715
Score = 303 bits (776), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 308/606 (50%), Gaps = 82/606 (13%)
Query: 388 APTSYEEFPG--IHPFMKKNLNEGMNITQVTTVQQLSIQPIL---DGGDVLVRSQTGSGK 442
AP + + F G + + +L M I + T++Q++ I IL D D + +QTGSGK
Sbjct: 120 APLTDDSFEGLGVGSLVVSHLENKMRIQKSTSIQKVVIPQILQNADKTDFFIHAQTGSGK 179
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
TLAY +PI + M I RK G +A+II PTRELA Q + T L ++VP L
Sbjct: 180 TLAYLLPIFSAILGMGDHIDRKSGCFALIIAPTRELASQIYHVTTMLANCCHYLVPCLLI 239
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKF---SKVEHLVLDEADRILDQGY 559
GGE+ KSEKAR+RKG + ++ TPGR+LDH ++T+ +K S + ++VLDE D++++ G+
Sbjct: 240 GGERKKSEKARLRKGCNFIIGTPGRILDHFQNTKVIKEQMQSSLRYVVLDEGDKLMELGF 299
Query: 560 ERDIAEFLEILK------KQKPQFQS----ILLSATLTPAVQRLAGMTLQN--PIQIDAA 607
E I + +EI+ ++ P+ + +L SAT V +L+ +L N I I
Sbjct: 300 EETINQIMEIVNSMDVITRKYPKLPNRIVHLLCSATKNNEVAKLSKRSLDNYKVISIGGK 359
Query: 608 DSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES---KMLVFM 664
T + NT+ +PD L Q ++ PPKLRL+ LA +L Q D S + +VF+
Sbjct: 360 KDTMMDNTS----VPDQLLQKVVIAPPKLRLITLAG-VLDGIQKKPLDAGSVAKRTIVFL 414
Query: 665 ATQDMADYHTELLS-------TVLGEN---------------------IAFFKLHGSMSQ 696
+ D DYH E+ S ++G++ I +KLHGS+SQ
Sbjct: 415 SCADSVDYHFEVFSGNDGLYKNLVGDSVRVLSKGNKILPSIKDEELPGIICYKLHGSLSQ 474
Query: 697 SERTEVFKTFRS------VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
RT K F + K +L CTDVA+RGLDLP V ++++ P + D++HR+GR
Sbjct: 475 QMRTMTLKHFATDSEQTKGKHLILFCTDVASRGLDLPDVSTVIEFDPPFAVEDHLHRIGR 534
Query: 751 TARVGHEGSSLLFLIPSEVK-LVEELQ------------NRRIRIEEIKLKDCLQNLLSV 797
TAR G G +LLFL+P E + ++ +Q + + I+ D +N +
Sbjct: 535 TARAGRSGEALLFLLPGEEEGYLDYIQKYHPKGWDLLDAEKDVLIKAFNDIDVARNDKEI 594
Query: 798 KMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHI 857
K G +T AT ++ E +L+ + A KGY S VR YA++ +
Sbjct: 595 KSTGKTFEW-----DTNATTWHLNVERRILENEQFKEQATKGYISHVRAYATHISAEKQY 649
Query: 858 FNFKQIHLGHFAKSFALRDAPSVIS-GIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
FN K +HLGH AKSF LRD P + K N E K K K F+ + KQ
Sbjct: 650 FNLKGVHLGHLAKSFGLRDRPKAMGMNSSKDANGNERSKPKKENAKNKMFRM-ARMAAKQ 708
Query: 917 MLSEFD 922
EF+
Sbjct: 709 SADEFN 714
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 170/355 (47%), Gaps = 81/355 (22%)
Query: 1 MNITQVTTVQQLSIQPIL---DGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q++ I IL D D + +QTGSGKTLAY +PI + M I RK G
Sbjct: 144 MRIQKSTSIQKVVIPQILQNADKTDFFIHAQTGSGKTLAYLLPIFSAILGMGDHIDRKSG 203
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A+II PTRELA Q + T L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 204 CFALIIAPTRELASQIYHVTTMLANCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 263
Query: 118 RLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATL 177
R+LDH ++T+ + K Q QS L
Sbjct: 264 RILDHFQNTKVI-----------------------------------KEQMQSSL----- 283
Query: 178 TPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK------KQKPQFQS 231
++VLDE D++++ G+E I + +EI+ ++ P+ +
Sbjct: 284 ------------------RYVVLDEGDKLMELGFEETINQIMEIVNSMDVITRKYPKLPN 325
Query: 232 ----VLLSATLTPAVQRLAGMTLQN--PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTP 285
+L SAT V +L+ +L N I I T + NT+ +PD L Q ++ P
Sbjct: 326 RIVHLLCSATKNNEVAKLSKRSLDNYKVISIGGKKDTMMDNTS----VPDQLLQKVVIAP 381
Query: 286 PKLRLVALASFILGKCQNVNEDEES---KMLVFMATQDMADYHTELLSTKKKIKK 337
PKLRL+ LA +L Q D S + +VF++ D DYH E+ S + K
Sbjct: 382 PKLRLITLAG-VLDGIQKKPLDAGSVAKRTIVFLSCADSVDYHFEVFSGNDGLYK 435
>sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana
GN=RH51 PE=2 SV=1
Length = 568
Score = 295 bits (754), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 275/482 (57%), Gaps = 53/482 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q SIQP+L+G DVL ++TGSGKTLA+ IP ++ L + + S ++G
Sbjct: 107 MGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELL--FKERFSPRNGTGV 164
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+QT + +L K + V S + GG +SE RI G ++++ATPGRLL
Sbjct: 165 IVICPTRELAIQTKNVAEELLKHHSQTV-SMVIGGNNRRSEAQRIASGSNLVIATPGRLL 223
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ + ++ LV+DEADRIL++ +E D+ + L+IL K + Q+ L SAT T
Sbjct: 224 DHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR---QTALFSATQTSK 280
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
V+ LA ++L +P+ +D D V + L+Q + V P K RL+ L SF+
Sbjct: 281 VKDLARVSLTSPVHVDVDDGR-------RKVTNEGLEQGYCVVPSKQRLILLISFLK--- 330
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
+N+N+ K++VF +T +HTE++ ++ +HG M Q+ RT+ F F
Sbjct: 331 KNLNK----KIMVFFSTCKSVQFHTEIMKI---SDVDVSDIHGGMDQNRRTKTFFDFMKA 383
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARV-GHEGSSLLFLIPSE 768
K G+L+CTDVAARGLD+P VDWI+QY P T+Y+HRVGRTAR G +G +LL LIP E
Sbjct: 384 KKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEE 443
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
++ + L+ ++ ++E++ + RL++ +Q + E V +
Sbjct: 444 LQFIRYLKAAKVPVKELEFNE--------------KRLSN---------VQSALEKCVAK 480
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI----SGI 884
L+ A Y +++ Y S+S L+ IFN ++ L A+SF P V SG
Sbjct: 481 DYNLNKLAKDAYRAYLSAYNSHS--LKDIFNVHRLDLLAVAESFCFSSPPKVNLNIESGA 538
Query: 885 GK 886
GK
Sbjct: 539 GK 540
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 130/216 (60%), Gaps = 14/216 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q SIQP+L+G DVL ++TGSGKTLA+ IP ++ L + + S ++G
Sbjct: 107 MGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELL--FKERFSPRNGTGV 164
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+QT + +L K + V S + GG +SE RI G ++++ATPGRLL
Sbjct: 165 IVICPTRELAIQTKNVAEELLKHHSQTV-SMVIGGNNRRSEAQRIASGSNLVIATPGRLL 223
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ + ++ LV+DEADRIL++ +E D+ + L+IL K + Q+ L SAT
Sbjct: 224 DHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR---QTALFSAT---Q 277
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI-----LDQGY 211
T K + + H+ +D+ R L+QGY
Sbjct: 278 TSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGY 313
>sp|P36120|DBP7_YEAST ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP7 PE=1 SV=1
Length = 742
Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 323/643 (50%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVSSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRM-ARMAEKQIASEFN 741
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>sp|A6ZZY8|DBP7_YEAS7 ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP7 PE=3 SV=1
Length = 742
Score = 291 bits (745), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 205/643 (31%), Positives = 323/643 (50%), Gaps = 90/643 (13%)
Query: 361 ISSLFQNNPDIPNVPTRRLKPVSEALF---APTSYEEFP--GIHPFMKKNLNEGMNITQV 415
+SSLF +N +I + + A+ AP ++F G+ + +L + M I +
Sbjct: 108 VSSLFTSNREITTAVNTNIHDENVAINPSNAPLKGDQFASLGVTSLLVSHLEQKMRIKKP 167
Query: 416 TTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVII 472
T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G +A++I
Sbjct: 168 TSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVI 227
Query: 473 LPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHC 532
PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPGR+LDH
Sbjct: 228 APTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHL 287
Query: 533 KHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILK----------KQKPQFQS 579
++T+ +K + ++VLDE D++++ G++ I+E ++I+ K +
Sbjct: 288 QNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVH 347
Query: 580 ILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLV 639
+L SATLT V RL + L++ I D T V PD L Q + PPKLRLV
Sbjct: 348 MLCSATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLV 404
Query: 640 ALASFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLSTVLGE-------- 683
LA+ + N+ +D ++SK L VF++ D ++H + S G
Sbjct: 405 TLAATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKNLTGDS 460
Query: 684 --------------------NIAFFKLHGSMSQSERTEVFKTF------RSVKSGVLICT 717
++ +KLHGS+SQ RT + F K ++ CT
Sbjct: 461 VRLLTKGNTMFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCT 520
Query: 718 DVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQ 776
DVA+RGLDLP V +++ P + D++HRVGRTAR G +G SLLFL+P E K ++ +Q
Sbjct: 521 DVASRGLDLPHVGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQ 580
Query: 777 ------------NRRIRIEEIKLKDCLQNLLSVKMEGDLSRLAD-GNVE----TAATALQ 819
++ I + K + +N ++ + S+ D G+ E T AT
Sbjct: 581 PYHPMGWELLKFDKEILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWH 640
Query: 820 MSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPS 879
++ E V+ A KG+ S VR YA++ + FN K +HLGH AKSF LR+ P
Sbjct: 641 LNIERRVVGDSAFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPK 700
Query: 880 VISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEFD 922
+ G+ K+ K +K K F+ ++KQ+ SEF+
Sbjct: 701 AM-GLQSSKDGNSEKKPTKENSKNKMFRM-ARMAEKQIASEFN 741
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 72/344 (20%)
Query: 1 MNITQVTTVQQLSIQPILDGG---DVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDG 57
M I + T++Q+ +I I+ D + +QTGSGKTL+Y +PII + M + R G
Sbjct: 162 MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSG 221
Query: 58 IYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPG 117
+A++I PTRELA Q + + L ++VP L GGE+ KSEKAR+RKG + ++ TPG
Sbjct: 222 AFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281
Query: 118 RLLDHCKHTETLK---FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 174
R+LDH ++T+ +K + ++VLDE D++++ G++ I+E ++I+ I ++
Sbjct: 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIV-------HDIPIN 334
Query: 175 ATLTPATCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLL 234
+ KF K+ H ++ +L
Sbjct: 335 SE--------------KFPKLPHKLV------------------------------HMLC 350
Query: 235 SATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 294
SATLT V RL + L++ I D T V PD L Q + PPKLRLV LA
Sbjct: 351 SATLTDGVNRLRNVALKDYKLISNGTKKDSDIVT---VAPDQLLQRITIVPPKLRLVTLA 407
Query: 295 SFILGKCQNVNED-----EESKML---VFMATQDMADYHTELLS 330
+ + N+ +D ++SK L VF++ D ++H + S
Sbjct: 408 ATL----NNITKDFIASGQQSKTLRTIVFVSCSDSVEFHYDAFS 447
>sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=HAS1 PE=3
SV=2
Length = 591
Score = 286 bits (732), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 299/551 (54%), Gaps = 54/551 (9%)
Query: 366 QNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQP 425
+NN D+PN L PV+ A S+EE MK +NE M T++T +Q+ I P
Sbjct: 93 ENNTDLPNGGQLTLPPVAGA--EAQSFEELKLSEKTMKA-INE-MKFTKMTEIQRRGIPP 148
Query: 426 ILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEI 485
L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G +++ PTRELALQ +
Sbjct: 149 SLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGVIVVSPTRELALQIFGV 206
Query: 486 FTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEH 545
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T + F ++
Sbjct: 207 ARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTPFV-FKNLKS 264
Query: 546 LVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQI 604
LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT T V+ LA ++L+ P+ I
Sbjct: 265 LVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTKVEDLARISLRPGPLYI 322
Query: 605 DAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFM 664
+ D ++T + L +Q +I+ +R + L SF+ + + K++VF
Sbjct: 323 NV-DEEKQYSTVEGL------EQGYIICETDMRFLLLFSFL-------KRNLKKKIIVFF 368
Query: 665 ATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGL 724
++ YH ELL+ + ++ LHG Q +RT F F + K G LICTDVAARGL
Sbjct: 369 SSCACVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 425
Query: 725 DLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIE 783
D+P VDWI+Q+ P DY+HRVGRTAR ++G SL+FL P+E+ + L+ R+ +
Sbjct: 426 DIPSVDWIIQFDPPDDPRDYIHRVGRTARGSNNKGRSLMFLQPNELGFLSHLKAARVPVA 485
Query: 784 EIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSW 843
E N + K+ +Q E + Q L+ SA GY S+
Sbjct: 486 EF-------NFPTKKI----------------INVQSQLEKLISQNYYLNKSAKDGYRSY 522
Query: 844 VRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKKMAINKE 903
+ YAS+S LR +F+ ++ L AKSF P V +G ++++ + + A +
Sbjct: 523 MHAYASHS--LRSVFDINKLDLAKVAKSFGFTQPPRVDITLGASMSRDKKQQGRRAYGSQ 580
Query: 904 KSFKQRGNFSK 914
Q F++
Sbjct: 581 PRQNQGNKFTR 591
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 128/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P L G DVL ++TGSGKTLA+ IP+I+ L +R K ++G
Sbjct: 133 MKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKP--RNGTGV 190
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 191 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLAKGVNLLIATPGRLL 249
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F ++ LV+DEADRIL+ G+E ++ + +++L K+ Q++L SAT
Sbjct: 250 DHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKVLPKE--DRQTMLFSATQTTK 306
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E ++S VE L+QGY
Sbjct: 307 VEDLARISLRPGPLYINVDEEKQYSTVEG---------LEQGY 340
>sp|P0CQ84|HAS1_CRYNJ ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=HAS1 PE=3 SV=1
Length = 607
Score = 285 bits (730), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 279/510 (54%), Gaps = 59/510 (11%)
Query: 390 TSYEEFPGIHPFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
T YE P F NL+ E M +T VQ +I P+L G DVL ++TGSGK
Sbjct: 124 TDYERVP----FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGK 179
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
T+A+ IP ++ L +R K G+ +II PTRELALQ + +L + + L
Sbjct: 180 TMAFLIPSVELLSTLRFKPVNGTGV--IIISPTRELALQIFGVAKELMQGHSQTF-GVLM 236
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GG K+E ++ KG++++VATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E +
Sbjct: 237 GGANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEE 296
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVI 621
+ + +++L + QS+L SAT T V LA ++L+ P+ I+ D T +T D L
Sbjct: 297 MKQIIKLLPSE--NRQSMLFSATQTTKVTDLARISLRPGPLYINV-DETKEASTADML-- 351
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
+Q ++V R + L +F+ ++ + K++VF ++ + YH ELL+ +
Sbjct: 352 ----EQGYVVCESDQRFMLLFTFL-------KKNLKKKVIVFFSSCNSVKYHAELLNYI- 399
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
++ LHG Q +RT F F + +G+L+CTDVAARGLD+P VDWI+Q+ P
Sbjct: 400 --DVPVLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDP 457
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
DY+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E +
Sbjct: 458 RDYIHRVGRTARAGKSGKSLLFLLPSELGFLRFLKVAKVPLNEYQFPQ------------ 505
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
++AD +Q ES + + L+TSA GY S+++ YASYS L+ IF+
Sbjct: 506 --KKVAD---------VQKQLESLISKNHYLNTSARDGYRSYLQAYASYS--LKKIFDVN 552
Query: 862 QIHLGHFAKSFALRDAPSVISGIGKPKNKE 891
++ L K+F P V +G K K+
Sbjct: 553 KLDLAKVGKAFGFAVPPKVNISVGSVKAKK 582
Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKT+A+ IP ++ L +R K G+
Sbjct: 147 MGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPVNGTGV-- 204
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + L GG K+E ++ KG++++VATPGRLL
Sbjct: 205 IIISPTRELALQIFGVAKELMQGHSQTF-GVLMGGANRKAEADKLVKGVNLIVATPGRLL 263
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 264 DHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSE--NRQSMLFSATQT 319
>sp|P0CQ85|HAS1_CRYNB ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=HAS1 PE=3 SV=1
Length = 607
Score = 285 bits (730), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 279/510 (54%), Gaps = 59/510 (11%)
Query: 390 TSYEEFPGIHPFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGK 442
T YE P F NL+ E M +T VQ +I P+L G DVL ++TGSGK
Sbjct: 124 TDYERVP----FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGK 179
Query: 443 TLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLT 502
T+A+ IP ++ L +R K G+ +II PTRELALQ + +L + + L
Sbjct: 180 TMAFLIPSVELLSTLRFKPVNGTGV--IIISPTRELALQIFGVAKELMQGHSQTF-GVLM 236
Query: 503 GGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERD 562
GG K+E ++ KG++++VATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E +
Sbjct: 237 GGANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEE 296
Query: 563 IAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVI 621
+ + +++L + QS+L SAT T V LA ++L+ P+ I+ D T +T D L
Sbjct: 297 MKQIIKLLPSE--NRQSMLFSATQTTKVTDLARISLRPGPLYINV-DETKEASTADML-- 351
Query: 622 PDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVL 681
+Q ++V R + L +F+ ++ + K++VF ++ + YH ELL+ +
Sbjct: 352 ----EQGYVVCESDQRFMLLFTFL-------KKNLKKKVIVFFSSCNSVKYHAELLNYI- 399
Query: 682 GENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSS 741
++ LHG Q +RT F F + +G+L+CTDVAARGLD+P VDWI+Q+ P
Sbjct: 400 --DVPVLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDP 457
Query: 742 TDYVHRVGRTARVGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEG 801
DY+HRVGRTAR G G SLLFL+PSE+ + L+ ++ + E +
Sbjct: 458 RDYIHRVGRTARAGKSGKSLLFLLPSELGFLRFLKVAKVPLNEYQFPQ------------ 505
Query: 802 DLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFK 861
++AD +Q ES + + L+TSA GY S+++ YASYS L+ IF+
Sbjct: 506 --KKVAD---------VQKQLESLISKNHYLNTSARDGYRSYLQAYASYS--LKKIFDVN 552
Query: 862 QIHLGHFAKSFALRDAPSVISGIGKPKNKE 891
++ L K+F P V +G K K+
Sbjct: 553 KLDLAKVGKAFGFAVPPKVNISVGSVKAKK 582
Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKT+A+ IP ++ L +R K G+
Sbjct: 147 MGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPVNGTGV-- 204
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + L GG K+E ++ KG++++VATPGRLL
Sbjct: 205 IIISPTRELALQIFGVAKELMQGHSQTF-GVLMGGANRKAEADKLVKGVNLIVATPGRLL 263
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 264 DHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLPSE--NRQSMLFSATQT 319
>sp|Q0UHM7|DBP7_PHANO ATP-dependent RNA helicase DBP7 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP7 PE=3 SV=1
Length = 831
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 211/635 (33%), Positives = 316/635 (49%), Gaps = 112/635 (17%)
Query: 351 PKKTEVKSGPISSLFQNNPDIPN---VPTRRL--KPVSEALFAPTSYE--EFP--GIHPF 401
PK + ISSLF NP P +R +P+ E AP S E F GI
Sbjct: 137 PKGAKGGKQVISSLFTYNPTSTTKTQAPEKRHDEEPI-EPSNAPLSSELDTFTSLGISTT 195
Query: 402 MKKNLNEGMNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK 460
+ +L + M++ T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E+
Sbjct: 196 LAAHLLKKMDLKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSAN 255
Query: 461 ---------ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEK
Sbjct: 256 MKKHKDDDAVQRNSGLFAIIMAPTRELSKQIALVLEKLLGCAHWLVATTVIGGEKKKSEK 315
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEIL- 570
AR+RKGI+ILVATPGRL DH +HTE L S V LVLDE DR+++ G+E++I + + L
Sbjct: 316 ARLRKGINILVATPGRLADHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGALN 375
Query: 571 ------KKQKPQF----QSILLSATLTPAVQRLAGMTLQNPIQIDAADSTDIHNTTDS-- 618
K + P ++L SAT+ V+RL ++L++ + + AD T+ D
Sbjct: 376 LRMRGNKTRIPGLPDKRTTVLCSATMKMDVERLGQISLKDAVHL-RADPTEREQEGDEPQ 434
Query: 619 ---LVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTE 675
P LKQ + V PKLRLV+L +++ K + K +VF++ D D+H +
Sbjct: 435 DERSYAPAQLKQSYAVVAPKLRLVSLIAYL--KRAFTRKGSVMKAIVFVSCADSVDFHFD 492
Query: 676 L---------------------------------------------LSTVLGEN------ 684
+ LS E+
Sbjct: 493 ILTSNLEEKNEKAEGTKDDTEEKADDDEPKKSTKKPKAIPQADPTKLSVTHAESPVLSPK 552
Query: 685 ---IAFFKLHGSMSQSERTEVFKTF-RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSS 740
+ ++LHGS+ QS RT F ++ + VLI TDVA+RGLDLP VD +V++ +
Sbjct: 553 SHAVTAYRLHGSLQQSLRTSTLAHFTKNNDAAVLIATDVASRGLDLPNVDLVVEFDPAFA 612
Query: 741 STDYVHRVGRTARVGHEGSSLLFLIPS-EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKM 799
D++HR+GRTAR G +G + +FL+P E V+ L+ R KD + +
Sbjct: 613 REDHLHRIGRTARAGRDGRACIFLMPGPEEGYVDILKTDR--------KDNEAGITITRQ 664
Query: 800 EGD--LSR-LADGNVETA------ATALQMSFESAVLQQKILHTSACKGYTSWVRFYASY 850
+ D L+R L + T A LQ++ E L SA + + S +R YA++
Sbjct: 665 DADDILTRGLVTSGIATKNAYMDIAQDLQLNVERWALASPARLESARRAFQSHIRAYATH 724
Query: 851 SKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
D R F+ K +HLGH AK+FALR+ PS + G
Sbjct: 725 VADERKYFDIKSLHLGHLAKAFALRERPSGMKAPG 759
Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 152/288 (52%), Gaps = 24/288 (8%)
Query: 1 MNITQVTTVQQLSI-QPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPK-------- 51
M++ T +Q+ +I Q + D D ++++TGSGKTLAY +PI+Q+L E+
Sbjct: 204 MDLKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIVQRLMELSANMKKHKDDD 263
Query: 52 -ISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGIS 110
+ R G++A+I+ PTREL+ Q + KL W+V + + GGEK KSEKAR+RKGI+
Sbjct: 264 AVQRNSGLFAIIMAPTRELSKQIALVLEKLLGCAHWLVATTVIGGEKKKSEKARLRKGIN 323
Query: 111 ILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQS 170
ILVATPGRL DH +HTE L S V LVLDE DR+++ G+E++I + + L + ++
Sbjct: 324 ILVATPGRLADHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGALNLRMRGNKT 383
Query: 171 ILLSATLTPATCWCKHTETLKFSKVE--------HLVLDEADRILDQGYERDIAEFLEIL 222
+ T C T + ++ HL D +R + +D +
Sbjct: 384 RIPGLPDKRTTVLCSATMKMDVERLGQISLKDAVHLRADPTEREQEGDEPQDERSYAPAQ 443
Query: 223 KKQK-----PQFQSVLLSATLTPAVQRLAGMTLQNPIQIDAADSTDIH 265
KQ P+ + V L A L A R G ++ + + ADS D H
Sbjct: 444 LKQSYAVVAPKLRLVSLIAYLKRAFTR-KGSVMKAIVFVSCADSVDFH 490
>sp|Q9SB89|RH27_ARATH DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana
GN=RH27 PE=2 SV=2
Length = 633
Score = 284 bits (726), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 275/490 (56%), Gaps = 50/490 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T +Q +I P++ G DVL ++TGSGKTLA+ IP ++ L R K + ++G
Sbjct: 172 MGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELL--YRVKFTPRNGTGV 229
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELA+Q+ + +L K + V + GGEK K+E + KG+++LVATPGRLL
Sbjct: 230 LVICPTRELAIQSYGVAKELLKYHSQTV-GKVIGGEKRKTEAEILAKGVNLLVATPGRLL 288
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T F ++ LV+DEADRIL+Q +E D+ + L +L K + Q+ L SAT +
Sbjct: 289 DHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR---QTSLFSATQSAK 345
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKC 649
V+ LA ++L +P+ ID + V + L+Q + V P +RL+ L +F L +
Sbjct: 346 VEDLARVSLTSPVYIDVDEGR-------KEVTNEGLEQGYCVVPSAMRLLFLLTF-LKRF 397
Query: 650 QNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSV 709
Q + K++VF +T +H EL + ++ G + Q++RT F F
Sbjct: 398 QG-----KKKIMVFFSTCKSTKFHAELFRYI---KFDCLEIRGGIDQNKRTPTFLQFIKA 449
Query: 710 KSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSE 768
++G+L+CT+VAARGLD P VDWIVQY P + TDY+HRVGRTAR G +G +LL L P E
Sbjct: 450 ETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQE 509
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+K ++ L+ +I +EE + ++ + LL VK E+ + +
Sbjct: 510 LKFIQYLKAAKIPVEEHEFEE--KKLLDVK---------------------PFVENLISE 546
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGI--GK 886
L SA + Y +++ Y S+S ++ +FN Q++L A SF D P V I G
Sbjct: 547 NYALKESAKEAYKTYISGYDSHS--MKDVFNVHQLNLTEVATSFGFSDPPKVALKIDRGG 604
Query: 887 PKNKEELKNK 896
++K E NK
Sbjct: 605 YRSKREPVNK 614
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 114/176 (64%), Gaps = 6/176 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q +I P++ G DVL ++TGSGKTLA+ IP ++ L R K + ++G
Sbjct: 172 MGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELL--YRVKFTPRNGTGV 229
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELA+Q+ + +L K + V + GGEK K+E + KG+++LVATPGRLL
Sbjct: 230 LVICPTRELAIQSYGVAKELLKYHSQTV-GKVIGGEKRKTEAEILAKGVNLLVATPGRLL 288
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
DH ++T F ++ LV+DEADRIL+Q +E D+ + L +L K + Q+ L SAT
Sbjct: 289 DHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTR---QTSLFSAT 341
>sp|A1CIQ5|HAS1_ASPCL ATP-dependent RNA helicase has1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=has1 PE=3 SV=1
Length = 625
Score = 282 bits (721), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 287/513 (55%), Gaps = 54/513 (10%)
Query: 370 DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
D+P++ RL V P + E G+ K +NE M +T +Q+ +I P+L G
Sbjct: 126 DLPSMDAVRLPTVDGE---PQKFTEL-GLSEKTLKAINE-MGFETMTEIQRRTIPPLLAG 180
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ + +L
Sbjct: 181 RDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVLVVSPTRELALQIFGVAREL 238
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
C+ + + GG ++E ++ KG+++L+ATPGRLLDH ++T+ F ++ LV+D
Sbjct: 239 CQHHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVID 297
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAAD 608
EADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+ D
Sbjct: 298 EADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYINV-D 354
Query: 609 STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
H+T + L +Q +++ R + L SF+ + + K++VF ++ +
Sbjct: 355 HRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFSSCN 401
Query: 669 MADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD+P
Sbjct: 402 CVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPA 458
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PSEV ++ L+ R+ +
Sbjct: 459 VDWIIQFDPPDDPRDYIHRVGRTARGANAKGRSLMFLQPSEVGFLKHLKEARVPV----- 513
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
V+ E S++ + +Q E + Q L+ SA +GY S+++ Y
Sbjct: 514 ---------VEFEFPASKIVN---------VQSQLEKLIGQNYYLNKSAKEGYRSYLQAY 555
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
AS+S LR +F+ ++ L AK F P +
Sbjct: 556 ASHS--LRSVFDVHKLDLVKVAKGFGFSTPPRI 586
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 161 MGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 218
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +LC+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 219 LVVSPTRELALQIFGVARELCQHHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLL 277
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 278 DHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 333
>sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=has1
PE=3 SV=1
Length = 609
Score = 279 bits (714), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 283/516 (54%), Gaps = 54/516 (10%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
N PD+P+V L P + P + E G+ + + E M +T +QQ +I P+
Sbjct: 108 NVPDLPSVDAVSL-PQPDG--GPKKFTEL-GLSEKTLQGIKE-MGFETMTEIQQRTIPPL 162
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTLA+ IP I+ L +R K ++G +++ PTRELALQ +
Sbjct: 163 LAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVA 220
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + + GG ++E ++ KG+++L+ATPGRLLDH ++T F ++ L
Sbjct: 221 RELLTAHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTL 279
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 280 VIDEADRILEVGFEDEMRQIIKILPNE--DRQTMLFSATQTTKVEDLARISLRPGPLYIN 337
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D H+T + L +Q +++ R + L SF+ + + K++VF +
Sbjct: 338 V-DHRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFS 383
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + YH ELL+ + ++ LHG Q +RT F F + K GVLICTDVAARGLD
Sbjct: 384 SCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTDVAARGLD 440
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P + DY+HRVGRTAR + G SL+FL PSEV ++ L+ R+ + E
Sbjct: 441 IPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSLMFLQPSEVGFLKYLKEARVPVVE 500
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
+ +++V Q E + Q L+ SA GY S++
Sbjct: 501 FDFP--AKKIVNV---------------------QSQLEKLISQNYYLNKSAKDGYRSYL 537
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ YAS+S LR +F+ ++ L AKSF P +
Sbjct: 538 QAYASHS--LRSVFDVHKLDLVKVAKSFGFSTPPRI 571
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 146 MGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKP--RNGTGV 203
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 204 IVVSPTRELALQIFGVARELLTAHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 262
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 263 DHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNE--DRQTMLFSATQT 318
>sp|Q54S03|DDX18_DICDI Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium
discoideum GN=ddx18 PE=3 SV=1
Length = 602
Score = 279 bits (714), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 283/521 (54%), Gaps = 61/521 (11%)
Query: 403 KKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKIS 462
KK++ E M ++T +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ L ++
Sbjct: 131 KKSIEE-MGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVL--VKSNFK 187
Query: 463 RKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILV 522
++G +II PTRELALQ + +L K T + GG K E+ R+ KG+++LV
Sbjct: 188 PRNGTGVIIISPTRELALQIYGVARELMKYHTQ-THGIVIGGASKKPEEERLEKGVNLLV 246
Query: 523 ATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILL 582
ATPGRLLDH ++T+ ++ L++DEADRIL+ G+E E +I+KK Q++L
Sbjct: 247 ATPGRLLDHLQNTKGFITKNLKCLIIDEADRILEVGFEE---EMHQIIKKVPKTRQTMLF 303
Query: 583 SATLTPAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVAL 641
SAT T V +A ++L N P+ + D +I + L+Q ++V P + R + L
Sbjct: 304 SATQTRKVDDIAKVSLNNSPVYVGVDDEREISTV-------EGLEQGYVVCPSERRFLLL 356
Query: 642 ASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTE 701
+F+ ++ K++VF+++ + Y ELL+ + +I +LHG Q +RT
Sbjct: 357 YTFL-------KKNLSKKIIVFLSSCNAVKYTAELLNYI---DIPVLELHGRQKQQKRTN 406
Query: 702 VFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSS 760
F F + + G+LICTDVAARGLD+P VDWI+QY P +Y+HRVGRTAR VG +G +
Sbjct: 407 TFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGRA 466
Query: 761 LLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQM 820
LLFL+P E+ ++ L+ ++ + E + S++A+ +Q
Sbjct: 467 LLFLLPKELGFLKYLKLAKVPLNEYEFPK--------------SKIAN---------VQD 503
Query: 821 SFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
E V Q L+ SA Y +++ YAS+S L+ IF+ + L AK+F D P V
Sbjct: 504 QLEKVVSQNFYLYNSARDAYKAYICAYASHS--LKDIFDVNALDLQCVAKAFGFLDPPKV 561
Query: 881 ISGIGKPKNKEELKNKKMAINKEKSFKQRGNFSKKQMLSEF 921
+ N + +K + F++KQ S+F
Sbjct: 562 NLNV----------NSSGKADFQKKSNNKSGFAQKQYGSKF 592
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 111/178 (62%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI P+L+G D+L ++TGSGKTLA+ IP I+ L ++ ++G
Sbjct: 137 MGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVL--VKSNFKPRNGTGV 194
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L K T + GG K E+ R+ KG+++LVATPGRLL
Sbjct: 195 IIISPTRELALQIYGVARELMKYHTQ-THGIVIGGASKKPEEERLEKGVNLLVATPGRLL 253
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ ++ L++DEADRIL+ G+E E +I+KK Q++L SAT T
Sbjct: 254 DHLQNTKGFITKNLKCLIIDEADRILEVGFEE---EMHQIIKKVPKTRQTMLFSATQT 308
>sp|Q4WQM4|HAS1_ASPFU ATP-dependent RNA helicase has1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=has1
PE=3 SV=2
Length = 622
Score = 279 bits (714), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 286/513 (55%), Gaps = 54/513 (10%)
Query: 370 DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
D+P+ T L P E P + E G+ K +N+ M +T +Q+ +I P+L G
Sbjct: 123 DLPSAGTLSL-PTVEG--EPQKFTEL-GLSEKTLKAIND-MGFETMTEIQRRTIPPLLAG 177
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ + +L
Sbjct: 178 RDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVAREL 235
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
C+ + + GG ++E ++ KG+++L+ATPGRLLDH ++T+ F ++ LV+D
Sbjct: 236 CQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVID 294
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAAD 608
EADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+ D
Sbjct: 295 EADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYINV-D 351
Query: 609 STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
H+T + L +Q +++ R + L SF+ + + K++VF ++ +
Sbjct: 352 HRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFSSCN 398
Query: 669 MADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD+P
Sbjct: 399 CVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPA 455
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
VDWI+Q+ P DY+HRVGRTAR +G SL+FL PSEV ++ L+ R+ +
Sbjct: 456 VDWIIQFDPPDDPRDYIHRVGRTARGTNAKGRSLMFLQPSEVGFLKHLKEARVPV----- 510
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
V+ E +++ + +Q E + Q L+ SA +GY S+++ Y
Sbjct: 511 ---------VEFEFPANKIVN---------VQSQLEKLIGQNYYLNKSAKEGYRSYLQAY 552
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
AS+S LR +F+ ++ L AK F P +
Sbjct: 553 ASHS--LRSVFDVHKLDLVKVAKGFGFSTPPRI 583
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 158 MGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 215
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +LC+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 216 IVVSPTRELALQIFGVARELCQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLL 274
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 275 DHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 330
>sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1
PE=3 SV=1
Length = 622
Score = 279 bits (713), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 287/513 (55%), Gaps = 54/513 (10%)
Query: 370 DIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDG 429
D+P+ RL P E P + E G+ K +N+ M +T +Q+ +I P+L G
Sbjct: 123 DLPSADALRL-PTVEG--EPQKFTEL-GLTEKTLKAIND-MGFDTMTEIQRRTIPPLLAG 177
Query: 430 GDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKL 489
DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ + +L
Sbjct: 178 RDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVIVVSPTRELALQIFGVAREL 235
Query: 490 CKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLD 549
C+ + + GG ++E ++ KG+++L+ATPGRLLDH ++T+ F ++ LV+D
Sbjct: 236 CQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFIFKNLKTLVID 294
Query: 550 EADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAAD 608
EADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+ D
Sbjct: 295 EADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYINV-D 351
Query: 609 STDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQD 668
H+T + L +Q +++ R + L SF+ + + K++VF ++ +
Sbjct: 352 HRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFSSCN 398
Query: 669 MADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPL 728
YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD+P
Sbjct: 399 CVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPA 455
Query: 729 VDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPSEVKLVEELQNRRIRIEEIKL 787
VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PSEV ++ L+ R+ +
Sbjct: 456 VDWIIQFDPPDDPRDYIHRVGRTARGANAKGRSLMFLQPSEVGFLKHLKEARVPV----- 510
Query: 788 KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFY 847
V+ E +++ + +Q E + Q L+ SA +GY S+++ Y
Sbjct: 511 ---------VEFEFPANKIVN---------VQSQLEKLIGQNYYLNKSAKEGYRSYLQAY 552
Query: 848 ASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
AS+S LR +F+ ++ L AK F P +
Sbjct: 553 ASHS--LRSVFDVHKLDLVKVAKGFGFSTPPRI 583
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 116/178 (65%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 158 MGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 215
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +LC+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 216 IVVSPTRELALQIFGVARELCQYHSQTY-GIVIGGANRRAEAEKLMKGVNLLIATPGRLL 274
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 275 DHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 330
>sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAS1 PE=1 SV=1
Length = 505
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 271/495 (54%), Gaps = 52/495 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 58 EKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGT 115
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGR
Sbjct: 116 GIIVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGR 174
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 175 LLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 232
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 233 TKVEDLARISLRPGPLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL- 284
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F
Sbjct: 285 ------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEF 335
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL
Sbjct: 336 CNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLT 395
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P+E+ + L+ ++ + E + E +Q E
Sbjct: 396 PNELGFLRYLKASKVPLNEYEFP-----------------------ENKIANVQSQLEKL 432
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV---IS 882
+ LH +A GY S+++ YAS+S L+ ++ ++ L AKS+ P V I
Sbjct: 433 IKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 490
Query: 883 GIGKPKNKEELKNKK 897
GK N + K K
Sbjct: 491 ASGKTPNTKRRKTHK 505
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 79/330 (23%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T+VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 60 MGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSL--KFKPRNGTGI 117
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG+++L+ATPGRLL
Sbjct: 118 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLL 176
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH ++T+ F ++ L++DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 177 DHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT-- 232
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTP 240
+KVE L RI +L P
Sbjct: 233 ------------TKVEDLA-----RI------------------------------SLRP 245
Query: 241 AVQRLAGMTLQNPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 300
P+ I+ TD N+T D L+Q ++V R + L SF+
Sbjct: 246 G-----------PLFINVVPETD--NST-----ADGLEQGYVVCDSDKRFLLLFSFL--- 284
Query: 301 CQNVNEDEESKMLVFMATQDMADYHTELLS 330
+++ K++VF+++ + Y+ ELL+
Sbjct: 285 ----KRNQKKKIIVFLSSCNSVKYYAELLN 310
>sp|Q4P6N0|HAS1_USTMA ATP-dependent RNA helicase HAS1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=HAS1 PE=3 SV=1
Length = 517
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 269/484 (55%), Gaps = 58/484 (11%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
+ M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L R K ++G
Sbjct: 66 DAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLH--RLKFKPRNGT 123
Query: 468 YAVIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVA 523
A+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VA
Sbjct: 124 GAIIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVA 178
Query: 524 TPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLS 583
TPGRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL Q S+L S
Sbjct: 179 TPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNRQ--SMLFS 236
Query: 584 ATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALA 642
AT T VQ LA ++L+ P+ I+ D+ +T S L+Q ++V R + L
Sbjct: 237 ATQTTKVQDLARISLRPGPLYINV--HADLAASTVS-----RLEQGYVVCESDRRFLLLF 289
Query: 643 SFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEV 702
+F+ ++ K++VFM++ + YH++LL+ + ++ LHG Q +RT
Sbjct: 290 TFL-------KKNAGKKIIVFMSSCNSVKYHSDLLNFI---DVPVLDLHGKQKQQKRTNT 339
Query: 703 FKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLL 762
F + + G L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G+ G SLL
Sbjct: 340 FFEYCNAPCGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARAGNSGKSLL 399
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMS 821
FL+P+E+ + L+ ++ + E D + N+ +G L +L N
Sbjct: 400 FLLPTELGFLRFLKVAKVPLNEYTFPSDKVANV-----QGQLEKLISKNY---------- 444
Query: 822 FESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI 881
LH SA GY S+++ Y SYS L+ IF+ ++ L AK++ P V
Sbjct: 445 ---------YLHQSARDGYRSYLQAYGSYS--LKRIFDIHKLDLAKVAKAYGFSVPPKVN 493
Query: 882 SGIG 885
IG
Sbjct: 494 ITIG 497
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ I P++ G DVL +QTGSGKTL++ IP I+ L R K ++G A
Sbjct: 68 MGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLH--RLKFKPRNGTGA 125
Query: 61 VIILPTRELALQTLEIFTKLC----KSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+II PTRELALQ + +L ++F I+ GG ++E +++KG++++VATP
Sbjct: 126 IIISPTRELALQIFGVAKELMAHHHQTFGIIM-----GGANRRAEADKLQKGVNLIVATP 180
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ FS ++ L +DEADRIL+ G+E ++ + ++IL QS+L SAT
Sbjct: 181 GRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILPNDNR--QSMLFSAT 238
Query: 177 LT 178
T
Sbjct: 239 QT 240
>sp|Q2UUN6|HAS1_ASPOR ATP-dependent RNA helicase has1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=has1 PE=3 SV=2
Length = 596
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 303/577 (52%), Gaps = 63/577 (10%)
Query: 342 NIDPDNYEIPKKTEVKSGPISSLFQNNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPF 401
N + E E KS + N D+P+ T RL P + P + E G+
Sbjct: 74 NTEESEQEASDNEEEKSDAEETPAANGEDLPSADTIRL-PQQDG--DPVKFTEL-GLSEK 129
Query: 402 MKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKI 461
K + EGM +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K
Sbjct: 130 TMKGI-EGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP 188
Query: 462 SRKDGIYAVIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKG 517
++G A+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG
Sbjct: 189 --RNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKG 241
Query: 518 ISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQF 577
+++LVATPGRLLDH ++T+ F + L++DEADRIL+ G+E ++ + +IL +
Sbjct: 242 VNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILPSE--NR 299
Query: 578 QSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKL 636
Q++L SAT T V+ LA ++L+ P+ I+ D H+T + L +Q +++
Sbjct: 300 QTMLFSATQTTKVEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICEADK 352
Query: 637 RLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQ 696
R + L SF+ + + K++VF+++ + Y+ ELL+ + ++ LHG Q
Sbjct: 353 RFLLLFSFL-------KRNLKKKIIVFLSSCNSVKYYGELLNYI---DLPVLDLHGKQKQ 402
Query: 697 SERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH 756
+RT F F + K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +
Sbjct: 403 QKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSN 462
Query: 757 -EGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAA 815
+G SL+FL PSEV ++ L+ R+ + E Q +++V
Sbjct: 463 GKGRSLMFLQPSEVGFLKHLKEARVPVVEFDFP--TQKIVNV------------------ 502
Query: 816 TALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALR 875
Q E + Q L+ SA +GY S+++ YAS+S LR +F+ ++ L +K F
Sbjct: 503 ---QSQLEKLIGQNYYLNKSAKEGYRSYLQAYASHS--LRSVFDVHKLDLVKVSKGFGFS 557
Query: 876 DAPSVISGIGKP-KNKEELKNKKMAINKEKSFKQRGN 911
P + +G K+K + FK++ N
Sbjct: 558 TPPRIDIQLGSSLKDKPPQGRRNYGSQPGSKFKRKHN 594
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ+ +I P+L G DVL ++TGSGKTL++ IP I+ L +R K ++G A
Sbjct: 137 MGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKP--RNGTGA 194
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+I+ PTRELALQ E+ +++ ++ GG ++E ++ KG+++LVATP
Sbjct: 195 IIVSPTRELALQIFGQVRELLAHHSQTYGIVI-----GGANRRAEAEKLMKGVNLLVATP 249
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH ++T+ F + L++DEADRIL+ G+E ++ + +IL + Q++L SAT
Sbjct: 250 GRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILPSE--NRQTMLFSAT 307
Query: 177 LT 178
T
Sbjct: 308 QT 309
>sp|Q5AK59|HAS1_CANAL ATP-dependent RNA helicase HAS1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=HAS1 PE=3 SV=1
Length = 565
Score = 276 bits (705), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 276/485 (56%), Gaps = 50/485 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 126 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 183
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 184 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 242
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + Q S+L SAT T
Sbjct: 243 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQ--SMLFSATQTTK 299
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D+ D L+Q ++V R + L SF+
Sbjct: 300 VEDLARISLRPGPLYINVVPEKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL--- 349
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + +++ELL+ + ++ LHG Q +RT F F +
Sbjct: 350 KRNVKK----KIIVFLSSCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 402
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+L+CTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 403 AKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPS 462
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A N+++ T L +
Sbjct: 463 ELGFLRYLKAAKVPLNE--------------YEFPANKIA--NIQSQLTKL-------IK 499
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+L+ SA GY ++++ YAS+ L+ ++ ++ L + SF L P V IG
Sbjct: 500 TNYLLNQSAKDGYRAYLQAYASHG--LKTVYQIDKLDLKKVSASFGLDQVPRVNLSIGGT 557
Query: 888 KNKEE 892
K K++
Sbjct: 558 KTKKQ 562
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + KI ++G
Sbjct: 126 MGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSL--KIKPRNGTAV 183
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 184 IIITPTRELALQIFGVARELMQ-FHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLL 242
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ + FS ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 243 DHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENR--QSMLFSATQT 297
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 278/511 (54%), Gaps = 53/511 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 128 EEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGT 185
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGR
Sbjct: 186 GVIVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGR 244
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT T
Sbjct: 245 LLDHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQT 300
Query: 588 PAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ ++ + + + L+Q ++V R + L SF+
Sbjct: 301 TKVEDLARVSLRPGPLYLNVDEEKEYSTV-------EGLEQGYVVCEADKRFILLFSFL- 352
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
+ ++ K++VF ++ + Y+ ELL+ + + LHG Q +RT F F
Sbjct: 353 ------QKMKKKKIIVFFSSCNSVKYYAELLNYI---DCQVLDLHGKQKQQKRTNTFFEF 403
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR +G SL+FL+
Sbjct: 404 CNADRGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTNKKGRSLMFLL 463
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
PSEV + L+ R+ + E D + NV Q E
Sbjct: 464 PSEVGFLTYLKQARVPVVEF----------------DFPTKSIKNV-------QSQLEKL 500
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
+ + L++SA G+ S++ YAS+S LR +F+ ++ L AKSF P V +G
Sbjct: 501 IGKNYYLNSSAKDGFRSYLHAYASHS--LRSVFDINKLDLAKVAKSFGFATPPRVDIQLG 558
Query: 886 KPKNKEELKNKKMAINKEKSFKQRGNFSKKQ 916
+K++ + A + +Q G + K++
Sbjct: 559 ASMSKDKKAGGRRAYGSQP--RQGGTYGKRR 587
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 32/244 (13%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP ++ L+ + K ++G
Sbjct: 130 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSL--KFKPRNGTGV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L K + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 188 IVVSPTRELALQIFGVARDLMKHHSQTY-GIVIGGANRRAEAEKLSKGVNLLIATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + LV+DEADRIL+ G+E ++ + ++IL K++ QS+L SAT
Sbjct: 247 DHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKER---QSMLFSATQTTK 302
Query: 177 --------LTPATCWCKHTETLKFSKVEHL----VLDEADR--ILDQGYERDIAEFLEIL 222
L P + E ++S VE L V+ EAD+ IL + FL+ +
Sbjct: 303 VEDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEADKRFIL-------LFSFLQKM 355
Query: 223 KKQK 226
KK+K
Sbjct: 356 KKKK 359
>sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=HAS1 PE=3 SV=1
Length = 605
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 269/477 (56%), Gaps = 49/477 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L+++ K ++G
Sbjct: 149 MGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKL--KFKPRNGTGV 206
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + L + + + + GG + E+ ++ KG+++LV TPGRLL
Sbjct: 207 IVVSPTRELALQIYGVARDLMANHSQTL-GIVIGGNNRRQEEEKLNKGVNLLVCTPGRLL 265
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++++ F ++ L++DEADRIL+ G+E+++ E ++IL K++ QS+L SAT T
Sbjct: 266 DHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKER---QSMLFSATQTTK 322
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ D HN + + + L+Q ++V R + L SF+
Sbjct: 323 VEDLARISLKKGPLYLN----VDEHNVSST---AEGLEQGYVVCDSDKRFLLLFSFL--- 372
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ K++VF+++ + ++ ELL+ + ++ LHG Q +RT F F +
Sbjct: 373 ----KRNAGKKIIVFLSSCNSVKFYGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFIN 425
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGSSLLFLIPSE 768
K GVLICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G S++FL PSE
Sbjct: 426 AKQGVLICTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARGSASGKSIMFLTPSE 485
Query: 769 VKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQ 828
+ + L+ ++ + E + + ++A+ +Q E +
Sbjct: 486 LGFLRYLKAAKVPLNEYEFPN--------------KKIAN---------VQSQLEKLISS 522
Query: 829 QKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
L+TSA GY ++++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 523 NYWLNTSAKDGYRAYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFNVPPKVNISIG 577
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 117/178 (65%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L+++ K ++G
Sbjct: 149 MGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKL--KFKPRNGTGV 206
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L + + + + GG + E+ ++ KG+++LV TPGRLL
Sbjct: 207 IVVSPTRELALQIYGVARDLMANHSQTL-GIVIGGNNRRQEEEKLNKGVNLLVCTPGRLL 265
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++++ F ++ L++DEADRIL+ G+E+++ E ++IL K++ QS+L SAT T
Sbjct: 266 DHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKER---QSMLFSATQT 320
>sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sapiens GN=DDX18 PE=1 SV=2
Length = 670
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 266/475 (56%), Gaps = 54/475 (11%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D D N T D L+Q ++V P + R + L +F+
Sbjct: 369 RKVEDLARISLKKEPLYVGVDD--DKANAT-----VDGLEQGYVVCPSEKRFLLLFTFL- 420
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 421 ------KKNRKKKLMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 471
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 472 CNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 531
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + E S+++D +Q E
Sbjct: 532 PEELGFLRYLKQSKVPLSEFDF--------------SWSKISD---------IQSQLEKL 568
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 569 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 621
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 10/180 (5%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T +T +Q SI+P+L+G D+L ++TGSGKTLA+ IP ++ + ++R ++G
Sbjct: 197 MGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR--FMPRNGTGV 254
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSW--LTGGEKMKSEKARIRKGISILVATPGR 118
+I+ PTRELA+QT + +L T V ++ + GG +E ++ GI+I+VATPGR
Sbjct: 255 LILSPTRELAMQTFGVLKEL---MTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGR 311
Query: 119 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 312 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRR---QTMLFSATQT 368
>sp|A2Q9T6|HAS1_ASPNC ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=has1 PE=3 SV=1
Length = 606
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 282/516 (54%), Gaps = 54/516 (10%)
Query: 367 NNPDIPNVPTRRLKPVSEALFAPTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPI 426
N D+P++ RL P ++ P + E MK + M +T +QQ +I P+
Sbjct: 105 NGADLPSLDAVRL-PQTDG--EPKKFTELNLSEKTMKGI--QDMGFETMTEIQQRTIPPL 159
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTL++ IP ++ L +R K ++G +++ PTRELALQ +
Sbjct: 160 LAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGVLVVSPTRELALQIFGVA 217
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + GG ++E ++ KG+++L+ATPGRLLDH ++T F ++ L
Sbjct: 218 RELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTL 276
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 277 VIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQTTKVEDLARISLRPGPLYIN 334
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D H+T + L +Q +++ R + L SF+ + + K++VF +
Sbjct: 335 V-DHRKEHSTVEGL------EQGYVICEADKRFLLLFSFL-------KRNLKKKIIVFFS 380
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + YH ELL+ + ++ +LHG Q +RT F F + K G LICTDVAARGLD
Sbjct: 381 SCNCVKYHAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLD 437
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P + DYVHRVGRTAR V +G SL+FL PSEV ++ L+ R+ + E
Sbjct: 438 IPAVDWIIQFDPPDDTRDYVHRVGRTARGVNGKGRSLMFLQPSEVGFLKHLKEARVPVVE 497
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
D N + +Q E + Q L+ SA +GY +++
Sbjct: 498 F---DFPANKI--------------------VNVQSQLEKLIGQNYYLNKSAKEGYRAYL 534
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ YAS+S LR +F+ ++ L AK F P +
Sbjct: 535 QAYASHS--LRSVFDVHKLDLVKIAKGFGFSTPPRI 568
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P+L G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 143 MGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 200
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 201 LVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 259
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T F ++ LV+DEADRIL+ G+E ++ + ++IL + + Q++L SAT T
Sbjct: 260 DHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSE--ERQTMLFSATQT 315
>sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus musculus GN=Ddx18 PE=2 SV=1
Length = 660
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 264/475 (55%), Gaps = 50/475 (10%)
Query: 408 EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGI 467
E M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 185 EEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGT 242
Query: 468 YAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGR 527
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGR
Sbjct: 243 GVLILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGR 301
Query: 528 LLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 587
LLDH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 302 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
Query: 588 PAVQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ LA ++L+ P+ + D ++ D L+Q ++V P + R + L +F+
Sbjct: 359 RKVEDLARISLKKEPLYVGVDDDKEVATV-------DGLEQGYVVCPSEKRFLLLFTFL- 410
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
++ + K++VF ++ YH ELL+ + ++ +HG Q++RT F F
Sbjct: 411 ------KKNRKKKVMVFFSSCMSVKYHYELLNYI---DLPVLAIHGKQKQNKRTTTFFQF 461
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLI 765
+ SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR + G +LL L
Sbjct: 462 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILR 521
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E+ + L+ ++ + + S+++D +Q E
Sbjct: 522 PEELGFLRYLKQSKVPLNQFDF--------------SWSKVSD---------IQSQLEKL 558
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
+ + LH SA + Y S++R Y S+S L+ IFN ++L A SF + P V
Sbjct: 559 IEKNYFLHKSAQEAYKSYIRAYDSHS--LKQIFNVNNLNLPQVALSFGFKVPPFV 611
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T +Q SI+P+L+G D+L ++TGSGKTLA+ IP+I+ + ++ K ++G
Sbjct: 187 MGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL--KFMPRNGTGV 244
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+I+ PTRELA+QT + +L + GG +E ++ GI+I+VATPGRLL
Sbjct: 245 LILSPTRELAMQTFGVLKELMTHHVHTY-GLIMGGSNRSAEVQKLLNGINIIVATPGRLL 303
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T + ++ LV+DEADRILD G+E ++ + +++L ++ Q++L SAT T
Sbjct: 304 DHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARR---QTMLFSATQT 358
>sp|A5E2Z9|HAS1_LODEL ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=HAS1 PE=3 SV=1
Length = 559
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 293/533 (54%), Gaps = 59/533 (11%)
Query: 377 RRLKPVSEALFAPTSYEEF--PGI-HPFMKKNLNE-------GMNITQVTTVQQLSIQPI 426
+RL+ +++ + TS E PG+ + F K + +E M ++T VQ +I P+
Sbjct: 68 KRLQELTKPKVSNTSEAEADEPGVNYSFEKADFSEPTMKAIKEMGFQKMTKVQAKTIPPL 127
Query: 427 LDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIF 486
L G DVL ++TGSGKTLA+ +P ++ L + KI ++G +II PTRELALQ +
Sbjct: 128 LAGRDVLGAAKTGSGKTLAFLLPAVELLYSL--KIKPRNGTAVIIITPTRELALQIFGVA 185
Query: 487 TKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHL 546
+L + + + GG + E ++ KG+++LVATPGRLLDH K+T+ F ++ L
Sbjct: 186 RQLMEYHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQGFVFLNLKAL 244
Query: 547 VLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQID 605
V+DEADRIL+ G+E ++ + ++IL + Q++L SAT T V+ LA ++L+ P+ I+
Sbjct: 245 VIDEADRILEIGFEEEMKQIIKILPNE--DRQTMLFSATQTTKVEDLARISLRPGPLYIN 302
Query: 606 AADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMA 665
D+ D L+Q ++V R + L SF+ +N+ + K++VF++
Sbjct: 303 VVPEKDVSTA-------DGLEQGYVVCDSDKRFLLLFSFL---KRNI----KKKIIVFLS 348
Query: 666 TQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLD 725
+ + +++ELL+ + ++ LHG Q +RT F F + K G+L+CTDVAARGLD
Sbjct: 349 SCNSVKFYSELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLD 405
Query: 726 LPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEE 784
+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PSE+ + L+ + + E
Sbjct: 406 IPAVDWIIQFDPPDDPRDYIHRVGRTARGTDGKGKSLMFLTPSELGFLRYLKAANVPLNE 465
Query: 785 IKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVLQQKILHTSACKGYTSWV 844
E +++A NV++ T L + +LH SA GY +++
Sbjct: 466 --------------YEFPANKIA--NVQSQLTKL-------IKTNYLLHQSAKDGYRAYL 502
Query: 845 RFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK 897
+ Y+S+S L+ ++ ++ L KSF P V IG E K+KK
Sbjct: 503 QAYSSHS--LKTVYQIDKLDLVKVGKSFGFDVPPKVNITIGASGKSIEKKHKK 553
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ +I P+L G DVL ++TGSGKTLA+ +P ++ L + KI ++G
Sbjct: 111 MGFQKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAVELLYSL--KIKPRNGTAV 168
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + + + GG + E ++ KG+++LVATPGRLL
Sbjct: 169 IIITPTRELALQIFGVARQLMEYHSQTC-GIVIGGADRRQEATKLAKGVNLLVATPGRLL 227
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH K+T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 228 DHLKNTQGFVFLNLKALVIDEADRILEIGFEEEMKQIIKILPNE--DRQTMLFSATQT 283
>sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=HAS1 PE=3 SV=1
Length = 610
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 272/483 (56%), Gaps = 60/483 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L MR K ++G
Sbjct: 149 MGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRFK--PRNGTGV 206
Query: 470 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 525
+++ PTRELALQ E+ K ++F ++ GG ++E ++ KG+++L+ATP
Sbjct: 207 IVVSPTRELALQIFGVARELMEKHSQTFGIVI-----GGANRRAEAEKLAKGVNLLIATP 261
Query: 526 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 585
GRLLDH +T+ F ++ L++DEADRIL+ G+E ++ ++IL + Q++L SAT
Sbjct: 262 GRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSIIKILPTDR---QTMLFSAT 318
Query: 586 LTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASF 644
T V+ LA ++L+ P+ I+ D H+T + L +Q +++ R L SF
Sbjct: 319 QTTKVEDLARISLKAGPLYINV-DYRKEHSTVEGL------EQGYVICDSDTRFRLLFSF 371
Query: 645 ILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFK 704
+ + ++ K++VF ++ + ++ ELL+ + ++ +LHG + Q RT F
Sbjct: 372 L-------KKHQKKKVIVFFSSCNSVKFYAELLNYI---DLPVLELHGKLKQQARTNRFF 421
Query: 705 TFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGHEGS--SLL 762
F + +SG LICTDVAARGLD+P VDW++Q+ P DY+HRVGRTAR G EG SL+
Sbjct: 422 EFCNAQSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTAR-GSEGKGRSLM 480
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL+PSE+ ++ L+ R+ + E +L +L++ Q
Sbjct: 481 FLLPSEIGFLKLLKEARVPLVEFELP--ANKILNI---------------------QSQL 517
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVIS 882
E+ + + L+ SA GY S+++ YAS+S LR +F+ ++ L AKSF P +
Sbjct: 518 EALITKNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVHKLDLVKVAKSFGFSTPPRIDI 575
Query: 883 GIG 885
+G
Sbjct: 576 SLG 578
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 14/182 (7%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ +I P+L G DVL ++TGSGKTLA+ IP I+ L MR K ++G
Sbjct: 149 MGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRFK--PRNGTGV 206
Query: 61 VIILPTRELALQTL----EIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATP 116
+++ PTRELALQ E+ K ++F ++ GG ++E ++ KG+++L+ATP
Sbjct: 207 IVVSPTRELALQIFGVARELMEKHSQTFGIVI-----GGANRRAEAEKLAKGVNLLIATP 261
Query: 117 GRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT 176
GRLLDH +T+ F ++ L++DEADRIL+ G+E ++ ++IL + Q++L SAT
Sbjct: 262 GRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSIIKILPTDR---QTMLFSAT 318
Query: 177 LT 178
T
Sbjct: 319 QT 320
>sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=has1 PE=1 SV=1
Length = 578
Score = 273 bits (698), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 271/496 (54%), Gaps = 50/496 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 107 MGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYAL--KFKPRNGTGV 164
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTRELALQ + +L K + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 165 IIISPTRELALQIFGVAKELLK-YHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLL 223
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F + LV+DEADRIL+ G+E ++ + ++IL + Q ++L SAT T
Sbjct: 224 DHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQ--TLLFSATQTTK 281
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ DS +T + L +Q ++V R + L SF+
Sbjct: 282 VEDLARISLKPGPLYVNV-DSGKPTSTVEGL------EQGYVVVDSDKRFLLLFSFL--- 331
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VFM++ Y ELL+ + ++ LHG Q RT F F +
Sbjct: 332 ----KRNLKKKVIVFMSSCASVKYMAELLNYI---DLPVLDLHGKQKQQRRTNTFFEFCN 384
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CT+VAARGLD+P VDWIVQY P DY+HRVGRTAR G SL+FL PS
Sbjct: 385 AEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGTKGTGKSLMFLAPS 444
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A+ +Q E V
Sbjct: 445 ELGFLRYLKTAKVSLNE--------------FEFPANKVAN---------VQSQLEKLVS 481
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L SA GY S+++ YASYS L+ IF+ ++ L AKSF P+V IG
Sbjct: 482 KNYYLQQSAKDGYRSYLQAYASYS--LKSIFDINKLDLAKVAKSFGFAHPPNVNITIG-A 538
Query: 888 KNKEELKNKKMAINKE 903
+ + K ++ NK+
Sbjct: 539 SGRTDKKERRAGYNKK 554
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ SI P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 107 MGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYAL--KFKPRNGTGV 164
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L K + + GG ++E ++ KG+++LVATPGRLL
Sbjct: 165 IIISPTRELALQIFGVAKELLK-YHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLL 223
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F + LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 224 DHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENR--QTLLFSATQT 279
>sp|Q9VD51|DDX18_DROME Probable ATP-dependent RNA helicase pitchoune OS=Drosophila
melanogaster GN=pit PE=2 SV=2
Length = 680
Score = 273 bits (698), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 170/513 (33%), Positives = 280/513 (54%), Gaps = 62/513 (12%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTAR 378
Query: 590 VQRLAGMTLQN-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
++ L+ + L++ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+
Sbjct: 379 IEALSKLALKSEPIYVG------VHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL--- 428
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
++ + K++VF ++ YH EL + + ++ +HG Q++RT F F +
Sbjct: 429 ----KKNRKKKVMVFFSSCMSVKYHHELFNYI---DLPVTSIHGKQKQTKRTTTFFQFCN 481
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+SG+L+CTDVAARGLD+P VDWIVQY P +Y+HRVGRTAR G G +LL + P
Sbjct: 482 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 541
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E ++AD +Q+ E +
Sbjct: 542 ELGFLRYLKAAKVPLNEF--------------EFSWQKIAD---------IQLQLEKLIA 578
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
+ L+ SA + + S+VR Y S+ L+ IFN + L AKSF P V +G
Sbjct: 579 KNYFLNQSAKEAFKSYVRAYDSHQ--LKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAA 636
Query: 888 KNKEELKN---------KKM---AINKEKSFKQ 908
K + K KKM + +K++ FKQ
Sbjct: 637 KRERPEKRVGGGGFGFYKKMNEGSASKQRHFKQ 669
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 16/248 (6%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q S+ P+L G D++ +QTGSGKTLA+ IP ++ + ++R ++G
Sbjct: 205 MGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR--FMPRNGTGV 262
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTREL++QT + +L + GG + E ++ KGI+ILVATPGRLL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTY-GLVMGGSNRQVESEKLGKGINILVATPGRLL 321
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 180
DH +++ + ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T A
Sbjct: 322 DHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQT-A 377
Query: 181 TCWCKHTETLKFSKVEHLVLDEADRI----LDQGY-----ERDIAEFLEILKKQKPQFQS 231
LK + V D D L+QGY E+ + LKK + +
Sbjct: 378 RIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVM 437
Query: 232 VLLSATLT 239
V S+ ++
Sbjct: 438 VFFSSCMS 445
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 81/140 (57%), Gaps = 18/140 (12%)
Query: 192 FSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLAGMTLQ 251
+ ++ L++DE DRIL+ G+E ++ + + +L K++ Q++L SAT T ++ L+ + L+
Sbjct: 332 YKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR---QTMLFSATQTARIEALSKLALK 388
Query: 252 N-PIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGKCQNVNEDEES 310
+ PI + +H+ D+ + D L+Q +IV P + RL+ L +F+ ++ +
Sbjct: 389 SEPIYV------GVHDNQDTATV-DGLEQGYIVCPSEKRLLVLFTFL-------KKNRKK 434
Query: 311 KMLVFMATQDMADYHTELLS 330
K++VF ++ YH EL +
Sbjct: 435 KVMVFFSSCMSVKYHHELFN 454
>sp|Q0DBS1|RH51_ORYSJ Putative DEAD-box ATP-dependent RNA helicase 51 OS=Oryza sativa
subsp. japonica GN=Os06g0535100 PE=3 SV=2
Length = 590
Score = 273 bits (697), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 283/517 (54%), Gaps = 42/517 (8%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
MN T +T +Q SI P++ G DV+ ++TGSGKTLA+ IP I+ L +R S ++G
Sbjct: 104 MNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLR--FSPRNGTGV 161
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELA+QT + +L + + + ++ GG ++ E ++ KGI++LVATPGRLL
Sbjct: 162 IVLCPTRELAIQTHNVAKELMRYHSQTL-GYVIGGIDLRGEAEQLAKGINVLVATPGRLL 220
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH + T++ K+ ++ L++DEADRIL+Q +E + + ++L +Q Q ++L SAT T
Sbjct: 221 DHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQ--TVLFSATQTEK 278
Query: 590 VQRLAGMTLQNPIQIDAADSTDIHNTTD---SLVIPDSLKQHFIVTPPKLRLVALASFIL 646
V+ A +T + + T ++ D S + LKQ + V P + R + L +F+
Sbjct: 279 VEDFAKLTFGSK---EERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLK 335
Query: 647 GKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTF 706
E++K++VF ++ + +H +LL+ + I + +HG + Q +RT F F
Sbjct: 336 KAL-----SEKTKVMVFFSSCNSVKFHAQLLNFI---QIECYDIHGQLKQHQRTSTFFKF 387
Query: 707 RSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLI 765
+ G+L+CT+VAARGLD+P VD+IVQY P + DY+HRVGRTAR + +GS++LFL+
Sbjct: 388 HKAEHGILLCTNVAARGLDIPDVDYIVQYDPPDETKDYIHRVGRTARGDNGKGSAILFLL 447
Query: 766 PSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESA 825
P E++L+ L+ I + E + L L + D S E
Sbjct: 448 PKELQLLIHLKAANISVSEYVFRQELVPKLQPYLHYDSS---------------FEQEKI 492
Query: 826 VLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVI---- 881
V IL+ SA + Y S++ Y S+S ++ IF Q+ L A SF + P V
Sbjct: 493 VGGNYILNRSAKEAYKSYLLAYKSHS--MKDIFAIHQLDLTSVAASFCFSEPPKVNLDLE 550
Query: 882 SGIGKPKNKEELK-NKKMAINKEKSFKQRGNFSKKQM 917
S K + K + ++ I + ++G+ ++Q
Sbjct: 551 SSASKHRKKRNVNTGRRHGIGPSNPYGRKGSDDRRQF 587
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 118/178 (66%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
MN T +T +Q SI P++ G DV+ ++TGSGKTLA+ IP I+ L +R S ++G
Sbjct: 104 MNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLR--FSPRNGTGV 161
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELA+QT + +L + + + ++ GG ++ E ++ KGI++LVATPGRLL
Sbjct: 162 IVLCPTRELAIQTHNVAKELMRYHSQTL-GYVIGGIDLRGEAEQLAKGINVLVATPGRLL 220
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH + T++ K+ ++ L++DEADRIL+Q +E + + ++L +Q Q++L SAT T
Sbjct: 221 DHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGR--QTVLFSATQT 276
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 187 TETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSVLLSATLTPAVQRLA 246
T++ K+ ++ L++DEADRIL+Q +E + + ++L +Q Q+VL SAT T V+ A
Sbjct: 226 TKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGR--QTVLFSATQTEKVEDFA 283
Query: 247 GMTLQNPIQIDAADSTDIHNTTD---SLVIPDSLKQHFIVTPPKLRLVALASFILGKCQN 303
+T + + T ++ D S + LKQ + V P + R + L +F+
Sbjct: 284 KLTFGSK---EERQRTLVYVGVDDHESKATVEGLKQGYCVIPSERRFLVLYAFLKKAL-- 338
Query: 304 VNEDEESKMLVFMATQDMADYHTELLS 330
E++K++VF ++ + +H +LL+
Sbjct: 339 ---SEKTKVMVFFSSCNSVKFHAQLLN 362
>sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=HAS1 PE=3 SV=1
Length = 497
Score = 272 bits (696), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 264/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M TQ+T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 52 MGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGTGV 109
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 110 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLMKGVNILIATPGRLL 168
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q S+L SAT T
Sbjct: 169 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDRQ--SMLFSATQTTK 226
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D D L+Q ++V R + L SF+
Sbjct: 227 VEDLARISLRPGPLFINVDSEKDTSTA-------DGLEQGYVVCESDKRFLLLFSFL--- 276
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+++ K++VF+++ + Y+ ELL+ + ++ +LHG Q +RT F F +
Sbjct: 277 ----KRNQKKKVIVFLSSCNSVKYYAELLNYI---DLPVLELHGKQKQQKRTNTFFEFCN 329
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
+ G+L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL P+
Sbjct: 330 AERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPT 389
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E E +++A+ +Q E +
Sbjct: 390 ELGFLRYLKAAKVPLNE--------------YEFPTNKIAN---------VQAQLEKLIK 426
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
LH A GY S+++ YAS+S L+ ++ ++ L AKS+ P V IG
Sbjct: 427 SNYYLHQIAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVAKSYGFPVPPKVNITIG 482
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M TQ+T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 52 MGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSL--KFKPRNGTGV 109
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
++I PTRELALQ + +L + F + GG + E ++ KG++IL+ATPGRLL
Sbjct: 110 IVITPTRELALQIFGVARELME-FHSQTFGIVIGGANRRQEADKLMKGVNILIATPGRLL 168
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 169 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDR--QSMLFSATQT 224
>sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=HAS1 PE=3 SV=2
Length = 569
Score = 272 bits (696), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 271/491 (55%), Gaps = 51/491 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M ++T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 123 MGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 180
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + L + + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARDLMAHHSQTL-GIVIGGANRRQEADKLMKGVNLLIATPGRLL 239
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 240 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLPSD--ERQSMLFSATQTTK 297
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ T++ D L+Q ++ +R + L SF+
Sbjct: 298 VEDLARISLRAGPLYINVVPETEVSTA-------DGLEQGYVTCDSDMRFLLLFSFLR-- 348
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+N+ + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 349 -RNIKK----KIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 400
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
K G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR G +G SL+FL PS
Sbjct: 401 AKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTGGKGKSLMFLTPS 460
Query: 768 EVKLVEELQNRRIRIEEIKL-KDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAV 826
E+ + L+ + + E + + + N+ S L++L GN
Sbjct: 461 ELGFLRYLKAANVPLNEYEFPTNKIANIQS-----QLTKLIKGNY--------------- 500
Query: 827 LQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGK 886
LH SA GY ++++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 501 ----WLHQSAKDGYRAYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNISIGA 554
Query: 887 PKNKEELKNKK 897
E K+KK
Sbjct: 555 SGKSIEKKHKK 565
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M ++T VQ+ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 123 MGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSL--KFKPRNGTGV 180
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + L + + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 181 IVVSPTRELALQIFGVARDLMAHHSQTL-GIVIGGANRRQEADKLMKGVNLLIATPGRLL 239
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + +++L + QS+L SAT T
Sbjct: 240 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLPSD--ERQSMLFSATQT 295
>sp|Q6FIL3|HAS1_CANGA ATP-dependent RNA helicase HAS1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=HAS1 PE=3 SV=1
Length = 494
Score = 272 bits (695), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 276/496 (55%), Gaps = 56/496 (11%)
Query: 399 HPFMKKNLN-------EGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPII 451
H F NL+ E M +++T VQ +I P++ G DVL ++TGSGKTLA+ +P I
Sbjct: 29 HSFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTI 88
Query: 452 QKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEK 511
+ L + K ++G +II PTRELALQ + +L + F + GG + E
Sbjct: 89 ELLHSL--KFKPRNGTGVIIITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEA 145
Query: 512 ARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILK 571
++ KG+++LVATPGRLLDH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL
Sbjct: 146 EKLMKGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILP 205
Query: 572 KQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFI 630
+ Q S+L SAT T V+ L+ ++L+ P+ I+ H+++ + D L+Q ++
Sbjct: 206 NEDRQ--SMLFSATQTTKVEDLSRISLRPGPLFINVVSE---HDSSTA----DGLEQGYV 256
Query: 631 VTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKL 690
V R + L SF+ +++ K++VF+++ + Y+ ELL+ + ++ +L
Sbjct: 257 VCESDKRFLLLFSFL-------KRNQKKKIIVFLSSCNSVKYYAELLNYI---DLPVLEL 306
Query: 691 HGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGR 750
HG Q +RT F F + + G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGR
Sbjct: 307 HGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGR 366
Query: 751 TAR-VGHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADG 809
TAR +G SL+FLIP+E+ + L+ ++ + E E +++A+
Sbjct: 367 TARGTNGKGKSLMFLIPNELGFLRYLKAAKVPLNE--------------YEFPTNKIAN- 411
Query: 810 NVETAATALQMSFESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFA 869
+Q E + LH +A GY S+++ YAS+S L+ ++ ++ L A
Sbjct: 412 --------VQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHS--LKTVYQIDKLDLAKVA 461
Query: 870 KSFALRDAPSVISGIG 885
KS+ P V IG
Sbjct: 462 KSYGFPVPPKVNITIG 477
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T VQ +I P++ G DVL ++TGSGKTLA+ +P I+ L + K ++G
Sbjct: 47 MGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIELLHSL--KFKPRNGTGV 104
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +L + F + GG + E ++ KG+++LVATPGRLL
Sbjct: 105 IIITPTRELALQIFGVVRELME-FHSQTFGIVIGGANRRQEAEKLMKGVNLLVATPGRLL 163
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 164 DHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILPNE--DRQSMLFSATQT 219
>sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis (strain RS)
GN=HAS1 PE=3 SV=1
Length = 604
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/478 (34%), Positives = 266/478 (55%), Gaps = 49/478 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 142 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 199
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 200 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 258
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 259 DHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQTTK 316
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ D H+T + L +Q +++ R + L SF+
Sbjct: 317 VEDLARISLRPGPLYINV-DHRKEHSTVEGL------EQGYVICDSDKRFLLLFSFL--- 366
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF ++ + YH ELL+ + ++ LHG Q +RT F F +
Sbjct: 367 ----KRNLKKKIIVFFSSCNCVKYHAELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 419
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 420 AKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPS 479
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
EV ++ L++ R+ + E + + +++V Q E +
Sbjct: 480 EVGFLKHLKDARVPVVEFEFP--AKKIVNV---------------------QSQLEKLIG 516
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIG 885
Q L+ SA GY S+++ YAS+S LR +F+ ++ L AK F P V +G
Sbjct: 517 QNYYLNKSAKDGYRSYLQAYASHS--LRSVFDVNKLDLVKVAKGFGFPTPPRVDISLG 572
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +Q+ I P++ G DVL ++TGSGKTL++ IP ++ L +R K ++G
Sbjct: 142 MGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKP--RNGTGV 199
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 200 IVVSPTRELALQIFGVARELMAHHSQTY-GIVIGGANRRAEAEKLTKGVNLLIATPGRLL 258
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL + Q++L SAT T
Sbjct: 259 DHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSE--DRQTMLFSATQT 314
>sp|Q6BH93|HAS1_DEBHA ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=HAS1 PE=3 SV=1
Length = 568
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 269/490 (54%), Gaps = 49/490 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 122 MGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLRFK--PRNGTGV 179
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
V++ PTRELALQ + +L + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 180 VVVSPTRELALQIFGVARELMAHHSQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 238
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 239 DHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILPNE--DRQSMLFSATQTTK 296
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ A ++ L+Q ++V R + L SF+
Sbjct: 297 VEDLARISLRPGPLYINVASESEASTVA-------GLEQGYVVCESDKRFLLLFSFL--- 346
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+NV + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 347 KRNVKK----KIIVFLSSCNCVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 399
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTAR-VGHEGSSLLFLIPS 767
G+LICTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR +G SL+FL PS
Sbjct: 400 ATQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTAGKGKSLMFLTPS 459
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E + N ++ ++ L++L GN
Sbjct: 460 ELGFLRYLKAANVPLNEYEFP---TNKIA-NVQSQLTKLIKGNY---------------- 499
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA GY S+++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 500 ---WLHQSAKDGYRSYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNITIGAS 554
Query: 888 KNKEELKNKK 897
E K+KK
Sbjct: 555 GKSIEKKHKK 564
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +++T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 122 MGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLRFK--PRNGTGV 179
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
V++ PTRELALQ + +L + + GG + E ++ KG+++L+ATPGRLL
Sbjct: 180 VVVSPTRELALQIFGVARELMAHHSQTF-GIVIGGANRRQEAEKLMKGVNLLIATPGRLL 238
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F V+ LV+DEADRIL+ G+E ++ + ++IL + QS+L SAT T
Sbjct: 239 DHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILPNE--DRQSMLFSATQT 294
>sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=has-1 PE=3 SV=1
Length = 578
Score = 270 bits (691), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 262/473 (55%), Gaps = 50/473 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 125 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 182
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 183 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 241
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q ++L SAT T
Sbjct: 242 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDRQ--TMLFSATQTTK 298
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ ++ + + L Q ++V R + L SF L K
Sbjct: 299 VEDLARISLRPGPLYVNVDEEKQFSTV-------EGLDQGYVVVDADKRFLLLFSF-LKK 350
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
Q + K++VF ++ + Y++ELL + ++ LHG Q +RT F F +
Sbjct: 351 MQ------KKKVIVFFSSCNSVKYYSELLQYI---DLQVLDLHGKQKQQKRTNTFFEFCN 401
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLLFL P+
Sbjct: 402 AKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQPN 461
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ ++ + E +L+V Q E +
Sbjct: 462 ELGFLAHLKAAKVPVVEYDFPKS--KILNV---------------------QSQLEKLIG 498
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV 880
Q L+ SA GY S++ YAS+S LR +F+ ++ L AKSF P V
Sbjct: 499 QNYYLNQSAKDGYRSYLHAYASHS--LRSVFDIHKLDLVKVAKSFGFSTPPRV 549
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 130/223 (58%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G A
Sbjct: 125 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLRFK--PRNGTGA 182
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K+ + + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 183 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANRRAEAEKLGKGVNLLIATPGRLL 241
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH ++T + F + L++DEADRIL+ G+E ++ + ++IL K+ Q++L SAT
Sbjct: 242 DHLQNTPFV-FKNMRSLIIDEADRILEIGFEDEMRQIIKILPKEDR--QTMLFSATQTTK 298
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E +FS VE LDQGY
Sbjct: 299 VEDLARISLRPGPLYVNVDEEKQFSTVEG---------LDQGY 332
>sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=HAS1 PE=3 SV=2
Length = 567
Score = 270 bits (690), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 266/490 (54%), Gaps = 49/490 (10%)
Query: 410 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 469
M +T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 121 MGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 178
Query: 470 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 529
+++ PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 179 IVVSPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLAKGVNLLIATPGRLL 237
Query: 530 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLTPA 589
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL K+ + QS+L SAT T
Sbjct: 238 DHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPKE--ERQSMLFSATQTTK 295
Query: 590 VQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALASFILGK 648
V+ LA ++L+ P+ I+ T + D L+Q ++V R + L SF+
Sbjct: 296 VEDLARISLRPGPLYINVVPET-------AASTADGLEQGYVVCDSDKRFLLLFSFL--- 345
Query: 649 CQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVFKTFRS 708
+ + K++VF+++ + Y ELL+ + ++ LHG Q +RT F F +
Sbjct: 346 ----KKYSKKKIIVFLSSCNSVKYFGELLNYI---DLPVLDLHGKQKQQKRTNTFFEFCN 398
Query: 709 VKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLLFLIPS 767
K G L+CTDVAARGLD+P VDWI+Q+ P DY+HRVGRTAR + +G SL+FL PS
Sbjct: 399 AKQGTLVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSNGKGKSLMFLTPS 458
Query: 768 EVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSFESAVL 827
E+ + L+ + + E + N + V ++ LS+L N
Sbjct: 459 ELGFLRYLKAANVPLNEYEFP---TNKI-VNIQSQLSKLIKSNY---------------- 498
Query: 828 QQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSVISGIGKP 887
LH SA GY S+++ YAS+ L+ ++ ++ L AKSF P V IG
Sbjct: 499 ---WLHQSAKDGYRSYLQAYASHH--LKTVYQIDKLDLVKVAKSFGFDVPPKVNITIGAS 553
Query: 888 KNKEELKNKK 897
E K+KK
Sbjct: 554 GKSIEKKHKK 563
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T VQ +I P+L G DVL ++TGSGKTLA+ IP I+ L + K ++G
Sbjct: 121 MGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLYSL--KFKPRNGTGV 178
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L T + GG + E ++ KG+++L+ATPGRLL
Sbjct: 179 IVVSPTRELALQIFGVARELMAHHTQTF-GIVIGGANRRQEAEKLAKGVNLLIATPGRLL 237
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ F ++ LV+DEADRIL+ G+E ++ + ++IL K+ + QS+L SAT T
Sbjct: 238 DHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPKE--ERQSMLFSATQT 293
>sp|Q2GMX1|HAS1_CHAGB ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=HAS1 PE=3 SV=1
Length = 586
Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 274/509 (53%), Gaps = 53/509 (10%)
Query: 405 NLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRK 464
++NE M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K +
Sbjct: 126 SINE-MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLNSLRFKP--R 182
Query: 465 DGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVAT 524
+G +++ PTRELALQ + +L K+ + + GG +++E+ ++ KG+++L+AT
Sbjct: 183 NGTGVIVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANIRAEEDKLGKGVNLLIAT 241
Query: 525 PGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSA 584
PGRLLDH + + F ++ L++DEADRIL+ G+E ++ ++IL K+ Q++L SA
Sbjct: 242 PGRLLDHLRRG-SFVFKNLKSLIIDEADRILEVGFEDEMRHIVKILPKE--NRQTMLFSA 298
Query: 585 TLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLKQHFIVTPPKLRLVALAS 643
T T V+ LA ++L+ P+ I+ + + L Q +++ R + L S
Sbjct: 299 TQTTKVEDLARISLRPGPLYINVDEEKQFSTV-------EGLDQGYVIVDADKRFLLLFS 351
Query: 644 FILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIAFFKLHGSMSQSERTEVF 703
F+ + + K++VF+++ + Y++ELL + ++ LHG Q +RT F
Sbjct: 352 FL-------KKMAKKKIIVFLSSCNSVKYYSELLQYI---DLQVLDLHGKQKQQKRTNTF 401
Query: 704 KTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVHRVGRTARVGH-EGSSLL 762
F + K G LICTDVAARGLD+P VDWIVQ+ P DY+HRVGRTAR + +G SLL
Sbjct: 402 FEFCNAKQGTLICTDVAARGLDIPQVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLL 461
Query: 763 FLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLSRLADGNVETAATALQMSF 822
FL P E+ + L+ ++ + E +L+V Q
Sbjct: 462 FLQPCELGFLAHLKAAKVPVVEYDFPK--NKILNV---------------------QSQL 498
Query: 823 ESAVLQQKILHTSACKGYTSWVRFYASYSKDLRHIFNFKQIHLGHFAKSFALRDAPSV-- 880
E + L+ SA GY S++ YAS+S LR +F+ +++ + AK F P V
Sbjct: 499 EKLIGSNYYLNQSAKDGYRSYLHAYASHS--LRSVFDVQKLDMVKVAKGFGFSTPPRVDI 556
Query: 881 ISGIGKPKNKEELKNKKMAINKEKSFKQR 909
G G ++K+ + +S QR
Sbjct: 557 TLGAGMSRDKKPQARRAYGSQPRQSGHQR 585
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 129/223 (57%), Gaps = 27/223 (12%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M T++T +Q+ I P+L G DVL ++TGSGKTLA+ IP I+ L +R K ++G
Sbjct: 130 MGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLNSLRFKP--RNGTGV 187
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+++ PTRELALQ + +L K+ + + GG +++E+ ++ KG+++L+ATPGRLL
Sbjct: 188 IVVTPTRELALQIFGVARELMKNHSQTY-GVVIGGANIRAEEDKLGKGVNLLIATPGRLL 246
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSAT---- 176
DH + + F ++ L++DEADRIL+ G+E ++ ++IL K+ Q++L SAT
Sbjct: 247 DHLRRG-SFVFKNLKSLIIDEADRILEVGFEDEMRHIVKILPKE--NRQTMLFSATQTTK 303
Query: 177 --------LTPATCWCKHTETLKFSKVEHLVLDEADRILDQGY 211
L P + E +FS VE LDQGY
Sbjct: 304 VEDLARISLRPGPLYINVDEEKQFSTVEG---------LDQGY 337
>sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=has1 PE=3 SV=1
Length = 576
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 284/530 (53%), Gaps = 56/530 (10%)
Query: 388 APTSYEEFPGIHPFMKKNLNEGMNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYA 447
AP ++E P MK M +T +QQ +I P L G D+L ++TGSGKTLA+
Sbjct: 96 APQKFDELNLSEPTMKAIRQ--MGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFL 153
Query: 448 IPIIQKLQEMRPKISRKDGIYAVIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKM 507
IP ++ L +R K ++G +II PTRELALQ + +LC+ F + GG
Sbjct: 154 IPAVEMLSALRFK--PRNGTGVIIITPTRELALQIFGVAKELCE-FHSQTYGIVIGGANR 210
Query: 508 KSEKARIRKGISILVATPGRLLDHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFL 567
++E ++ KG+++L+ATPGRLLDH ++T+ + + LVLDEADR LD G+E ++ + +
Sbjct: 211 RAEAEKLNKGVNLLIATPGRLLDHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIV 270
Query: 568 EILKKQKPQFQSILLSATLTPAVQRLAGMTLQ-NPIQIDAADSTDIHNTTDSLVIPDSLK 626
+IL + + Q++L SAT T V+ LA ++L+ P+ I+ D H T D +
Sbjct: 271 KILPSE--ERQTLLFSATQTTKVEDLARISLKPGPLYINV-DHRKEHATVDGV------D 321
Query: 627 QHFIVTPPKLRLVALASFILGKCQNVNEDEESKMLVFMATQDMADYHTELLSTVLGENIA 686
Q +I+ R + L +F + ++ + K+++F ++ + Y+ +LL+ + ++
Sbjct: 322 QGYIICEADKRFLLLFTF-------LKKNLKKKIIIFFSSCNAVKYYADLLNYI---DLP 371
Query: 687 FFKLHGSMSQSERTEVFKTFRSVKSGVLICTDVAARGLDLPLVDWIVQYTAPSSSTDYVH 746
LHG + Q RT+ F F + G LICTDVAARGLD+P VD+I+Q+ P Y+H
Sbjct: 372 VLALHGKLKQQTRTQRFFEFCNATQGTLICTDVAARGLDIPAVDYIIQFDPPDEPKAYIH 431
Query: 747 RVGRTARV--GHEGSSLLFLIPSEVKLVEELQNRRIRIEEIKLKDCLQNLLSVKMEGDLS 804
RVGRTAR G G S++ L PSEV + L+ R+ + V+ E
Sbjct: 432 RVGRTARGTKGKIGRSIMLLQPSEVGFLNVLREARVPV--------------VEFEFPQK 477
Query: 805 RLADGNVETAATALQMSFESAVLQQKILH--TSACKGYTSWVRFYASYSKDLRHIFNFKQ 862
++ D +Q E + Q L+ SA GY +++ YAS+S LR +FN +
Sbjct: 478 KIID---------IQSQLEKLIGQNYYLNQIQSAKDGYRAYLHAYASHS--LRSVFNINK 526
Query: 863 IHLGHFAKSFALRDAPSVISGIGKPKNKEELKNKK--MAINKEKSFKQRG 910
+ L AKSF P V +G +K++++ ++ + NK FK+R
Sbjct: 527 LDLVKVAKSFGFTTPPRVDITLGASMSKDKVQARRPYGSQNKSARFKRRA 576
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 1 MNITQVTTVQQLSIQPILDGGDVLVRSQTGSGKTLAYAIPIIQKLQEMRPKISRKDGIYA 60
M +T +QQ +I P L G D+L ++TGSGKTLA+ IP ++ L +R K ++G
Sbjct: 116 MGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEMLSALRFK--PRNGTGV 173
Query: 61 VIILPTRELALQTLEIFTKLCKSFTWIVPSWLTGGEKMKSEKARIRKGISILVATPGRLL 120
+II PTRELALQ + +LC+ F + GG ++E ++ KG+++L+ATPGRLL
Sbjct: 174 IIITPTRELALQIFGVAKELCE-FHSQTYGIVIGGANRRAEAEKLNKGVNLLIATPGRLL 232
Query: 121 DHCKHTETLKFSKVEHLVLDEADRILDQGYERDIAEFLEILKKQKPQFQSILLSATLT 178
DH ++T+ + + LVLDEADR LD G+E ++ + ++IL + + Q++L SAT T
Sbjct: 233 DHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIVKILPSE--ERQTLLFSATQT 288
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 328,803,669
Number of Sequences: 539616
Number of extensions: 13658259
Number of successful extensions: 57318
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 523
Number of HSP's that attempted gapping in prelim test: 44114
Number of HSP's gapped (non-prelim): 5201
length of query: 930
length of database: 191,569,459
effective HSP length: 127
effective length of query: 803
effective length of database: 123,038,227
effective search space: 98799696281
effective search space used: 98799696281
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)