Query psy15527
Match_columns 207
No_of_seqs 139 out of 1124
Neff 7.2
Searched_HMMs 46136
Date Fri Aug 16 23:37:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15527.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15527hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10447 HflBKC-binding inner 100.0 8.2E-39 1.8E-43 266.5 22.9 163 43-207 53-219 (219)
2 cd06181 BI-1-like BAX inhibito 100.0 1.6E-36 3.4E-41 251.9 24.7 190 1-203 15-211 (212)
3 KOG2322|consensus 100.0 2.1E-37 4.6E-42 256.1 12.4 177 1-189 57-237 (237)
4 COG0670 Integral membrane prot 100.0 1.1E-34 2.3E-39 244.1 23.3 192 2-206 34-231 (233)
5 PF01027 Bax1-I: Inhibitor of 100.0 8.4E-32 1.8E-36 221.3 23.5 186 1-201 13-205 (205)
6 KOG1629|consensus 99.9 1.9E-21 4.1E-26 157.0 16.6 161 43-203 56-222 (235)
7 KOG1630|consensus 99.8 1.4E-17 3E-22 139.4 12.9 188 3-206 126-334 (336)
8 PF12811 BaxI_1: Bax inhibitor 99.7 4.6E-14 1E-18 121.0 24.0 163 41-207 90-274 (274)
9 COG4760 Predicted membrane pro 98.9 4.8E-07 1E-11 74.5 19.7 162 41-206 86-275 (276)
10 PF06123 CreD: Inner membrane 87.9 23 0.00049 32.8 14.1 48 15-70 284-331 (430)
11 PRK11715 inner membrane protei 81.9 44 0.00095 31.0 13.7 48 15-70 290-337 (436)
12 KOG3488|consensus 79.6 18 0.00038 25.1 7.3 57 147-203 8-76 (81)
13 KOG3103|consensus 37.9 2.6E+02 0.0056 23.9 8.3 61 91-152 143-204 (249)
14 PF10777 YlaC: Inner membrane 33.2 2.1E+02 0.0046 22.7 6.5 18 38-56 35-52 (155)
15 COG2917 Intracellular septatio 26.9 3.5E+02 0.0076 22.1 11.8 68 129-196 55-138 (180)
16 PF11992 DUF3488: Domain of un 25.5 4.6E+02 0.01 23.0 17.5 32 88-119 72-103 (325)
17 PF14147 Spore_YhaL: Sporulati 22.0 1.6E+02 0.0035 19.1 3.3 25 149-173 4-28 (52)
No 1
>PRK10447 HflBKC-binding inner membrane protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=266.47 Aligned_cols=163 Identities=26% Similarity=0.419 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHh----chhHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy15527 43 LVSLFATIGLLIGLHVKRLDHPVNLYLLAGFTMVQAFTLGIVVTFY----SQMVVLQAIFLTFLVVAGLTSFTFQSKRDF 118 (207)
Q Consensus 43 ~~~~i~~i~~~~~l~~~~~~~p~~~~ll~~ft~~~g~~l~~~~~~~----~~~~i~~A~~~T~~if~~ltl~a~~tk~df 118 (207)
+..++++++..+.. .++|++|.|+.+++.||.++|+++||++..| +|++|.+|++.|+++|+++++++++||||+
T Consensus 53 ~~~~~~~~gl~~~~-~~~~~~~~~~~llf~fT~~~G~~lg~i~~~y~~~~~~~iV~~A~~~Ta~iF~~ls~~a~~tk~Df 131 (219)
T PRK10447 53 ILTLVGMYGLMFLT-YKTANKPTGILSAFAFTGFLGYILGPILNTYLSAGMGDVIALALGGTALVFFCCSAYVLTTRKDM 131 (219)
T ss_pred HHHHHHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34456666666544 4568899999999999999999999999977 469999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHHHHHHHHHHH
Q psy15527 119 SVMGSGLFAALIILIGVSIIQIFFNNSLLDLVISFAGAIVFSLFIIFDTHMIMQKVSAEEYILATITLYMDILNLFMYIL 198 (207)
Q Consensus 119 ~~~~~~L~~~l~~liv~~l~~~f~~~~~~~~~~s~~g~~lf~~~l~~Dtq~i~~~~~~~d~i~~Al~LYlDiInlFl~iL 198 (207)
+++|+.++.++++++++++.++|++++..+.+++++|+++||+|++||||+|+|+ ++|||+.||++||+|++|+|+++|
T Consensus 132 s~lg~~L~~~l~~li~~~l~~~F~~s~~~~~~~s~~g~llfsgyilyDTq~Ii~~-g~~dyi~aAl~LYlDiinlFl~lL 210 (219)
T PRK10447 132 SFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHG-GETNYIRATVSLYVSLYNIFVSLL 210 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986 789999999999999999999999
Q ss_pred HHHHhhccC
Q psy15527 199 RILEALNRQ 207 (207)
Q Consensus 199 ~il~~~~~~ 207 (207)
||+++.+||
T Consensus 211 ~il~~~~~~ 219 (219)
T PRK10447 211 SILGFASRD 219 (219)
T ss_pred HHHccccCC
Confidence 999998886
No 2
>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family. Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.
Probab=100.00 E-value=1.6e-36 Score=251.90 Aligned_cols=190 Identities=41% Similarity=0.650 Sum_probs=171.9
Q ss_pred CchHHHHHHHHHHHchHHHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHHHHH---hhcccchhHHHHHHHHHHHH
Q psy15527 1 MQLLATVTVIILFTFVQDIKDFVHRKSSENLDLEHALSDWLVLVSLFATIGLLIGLH---VKRLDHPVNLYLLAGFTMVQ 77 (207)
Q Consensus 1 ~QLliT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~---~~~~~~p~~~~ll~~ft~~~ 77 (207)
.|+++|++.++...+.|+.++ ..+ ++|..+++.+++++..+.+. .++|++|.|+.++..||.++
T Consensus 15 ~~l~~t~~~~~~~~~~~~~~~-~~~------------~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ll~~ft~~~ 81 (212)
T cd06181 15 LQLLVTALVAYLGMFSPPLRN-VLS------------NTPLGWLLLLAFLGLVILLFCCRIKRRSSPANLILLFLFTALM 81 (212)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HHh------------ccHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 489999999999999999888 444 45566666666655554444 45788999999999999999
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Q psy15527 78 AFTLGIVVTFYSQMVVLQAIFLTFLVVAGLTSFTFQSKRDFSVMGSGLFAALIILIGVSIIQIFFNNSLLDLVISFAGAI 157 (207)
Q Consensus 78 g~~l~~~~~~~~~~~i~~A~~~T~~if~~ltl~a~~tk~df~~~~~~L~~~l~~liv~~l~~~f~~~~~~~~~~s~~g~~ 157 (207)
|+++++.+..++++.+.+|+..|+++|++++++++++|||++++|+.++.++.++++.++.++|++++..+.+++++|++
T Consensus 82 g~~l~~~~~~~~~~~i~~A~~~T~~if~~l~l~a~~tk~d~~~~g~~l~~~~~~l~~~~l~~~f~~~~~~~~~~~~~g~~ 161 (212)
T cd06181 82 GVTLGPILSVYTAASVLQAFGITAAVFGGLSLYALTTKRDFSFLGGFLFMGLIVLIVASLVNIFLQSPALQLAISALGVL 161 (212)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHhHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhC----CchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15527 158 VFSLFIIFDTHMIMQKV----SAEEYILATITLYMDILNLFMYILRILEA 203 (207)
Q Consensus 158 lf~~~l~~Dtq~i~~~~----~~~d~i~~Al~LYlDiInlFl~iL~il~~ 203 (207)
+|++|++||||+++++. ++|||+.+|++||+|++|+|+++||++++
T Consensus 162 lf~~~l~~Dtq~i~~~~~~~~~~~d~i~~al~LylDiinlF~~iL~il~~ 211 (212)
T cd06181 162 LFSGYILYDTQLIIGGYRLYLSPDDYILAALSLYLDIINLFLSLLRILGS 211 (212)
T ss_pred HHHHHHHHHHHHHHHhhhhccCcchHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999754 58999999999999999999999999975
No 3
>KOG2322|consensus
Probab=100.00 E-value=2.1e-37 Score=256.12 Aligned_cols=177 Identities=40% Similarity=0.648 Sum_probs=168.3
Q ss_pred CchHHHHHHHHHHHchHHHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHHHHHhh---cccchhHHHHHHHHHHHH
Q psy15527 1 MQLLATVTVIILFTFVQDIKDFVHRKSSENLDLEHALSDWLVLVSLFATIGLLIGLHVK---RLDHPVNLYLLAGFTMVQ 77 (207)
Q Consensus 1 ~QLliT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~---~~~~p~~~~ll~~ft~~~ 77 (207)
+||++|.+++..++++|+.++|+++ |+|+++.+.++.++..+.+.+. |||+|+|++++..||.++
T Consensus 57 ~QLl~T~~~~~~~~~~~~~~~~v~~------------~~~~~~~~~~vf~vt~l~l~c~~~~r~k~P~N~ilL~iFT~a~ 124 (237)
T KOG2322|consen 57 IQLLITLAVVAIFTVHEPVQDFVRR------------NPALYWALIVVFIVTYLSLACCEGLRRKSPVNLILLGIFTLAE 124 (237)
T ss_pred HHHHHHHHheeEEEEccHHHHHHHh------------CcHHHHHHHHHHHHHHHHHHccCcccccCcHHHhHHHHHHHHH
Confidence 4999999999999999999999999 9999999999999888888753 789999999999999999
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHH
Q psy15527 78 AFTLGIVVTFYSQMVVLQAIFLTFLVVAGLTSFTFQSKRDFSVMGSGLFAALIILIGVSIIQ-IFFNNSLLDLVISFAGA 156 (207)
Q Consensus 78 g~~l~~~~~~~~~~~i~~A~~~T~~if~~ltl~a~~tk~df~~~~~~L~~~l~~liv~~l~~-~f~~~~~~~~~~s~~g~ 156 (207)
+++.|..+++|++.+|++|+.+|+++++++++|+.++|+||+..++.++..+++++++|++. +|..++.++.+++++|+
T Consensus 125 s~~~g~~~a~~~~~~VL~Al~IT~~V~~slt~~t~qtK~DFt~~~~~l~~~l~vl~~~g~I~~~f~~~~~~~~vya~lgA 204 (237)
T KOG2322|consen 125 AFMTGLVTAFYDAKVVLLALIITTVVVLSLTLFTLQTKYDFTSLGGFLFALLIVLLLFGLIFLFFPYGPILVMVYAALGA 204 (237)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhheeeEEEEEEeeccchhhhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999554 45568999999999999
Q ss_pred HHHHHHHHHHHHHHhhhCCchHHHHHHHHHHHH
Q psy15527 157 IVFSLFIIFDTHMIMQKVSAEEYILATITLYMD 189 (207)
Q Consensus 157 ~lf~~~l~~Dtq~i~~~~~~~d~i~~Al~LYlD 189 (207)
++|++|++||||.++++++|||||.||+++|+|
T Consensus 205 llf~~yl~~Dtqllm~~~SPEEYI~aA~~lYlD 237 (237)
T KOG2322|consen 205 LLFCGYLVYDTQLLMGRISPEEYIFAALNLYLD 237 (237)
T ss_pred HHHhHHHHhhhHHHhccCCHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999998
No 4
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=244.08 Aligned_cols=192 Identities=31% Similarity=0.435 Sum_probs=170.5
Q ss_pred chHHHHHHHHHHHchHHHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHHHHHhh-cccchhHHHHHHHHHHHHHHH
Q psy15527 2 QLLATVTVIILFTFVQDIKDFVHRKSSENLDLEHALSDWLVLVSLFATIGLLIGLHVK-RLDHPVNLYLLAGFTMVQAFT 80 (207)
Q Consensus 2 QLliT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~-~~~~p~~~~ll~~ft~~~g~~ 80 (207)
+|++|...++...+.+...+.. + +++.+++..++.+..+++.+.+ ++++|.+...+..||.++|++
T Consensus 34 ~L~~t~~~a~~~~~~~~~~~~~-~------------~~~~~~vl~~a~l~~~~~~~~~~~~s~~~~~~~~~~~t~l~G~t 100 (233)
T COG0670 34 GLLVTAVGAALAAYLLFNLGLL-S------------LSPPGFVLIIAGLAGVFFLSRKINKSSPTALILFFVYTALVGLT 100 (233)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-c------------cccHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Confidence 6788888888876665555531 3 5566777778888887777654 468899999999999999999
Q ss_pred HHHHHHHhchhH----HHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Q psy15527 81 LGIVVTFYSQMV----VLQAIFLTFLVVAGLTSFTFQSKRDFSVMGSGLFAALIILIGVSIIQIFFNNSLLDLVISFAGA 156 (207)
Q Consensus 81 l~~~~~~~~~~~----i~~A~~~T~~if~~ltl~a~~tk~df~~~~~~L~~~l~~liv~~l~~~f~~~~~~~~~~s~~g~ 156 (207)
++++...|.+.. +.+|+..|+++|.+++++++++|||++++++.++++++++++++++|+|.+++.+++++|++|+
T Consensus 101 L~~i~~~Y~~~~~~~~i~~af~~t~~~F~~ls~~g~~tk~Dls~l~~~l~~aligLiiasvvn~Fl~s~~l~~~IS~lgv 180 (233)
T COG0670 101 LSPILLVYAAISGGDAIAAAFGITALVFGALSLYGYTTKRDLSSLGSFLFMALIGLIIASLVNIFLGSSALHLAISVLGV 180 (233)
T ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 999999986555 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh-CCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy15527 157 IVFSLFIIFDTHMIMQK-VSAEEYILATITLYMDILNLFMYILRILEALNR 206 (207)
Q Consensus 157 ~lf~~~l~~Dtq~i~~~-~~~~d~i~~Al~LYlDiInlFl~iL~il~~~~~ 206 (207)
++|+++++||||+|+|+ .+||+++.+|++||+|+||+|+++||+++..++
T Consensus 181 lifsgli~yDtq~I~~~~~~~~~~i~~AlsLYldfiNlF~~LL~i~g~~~~ 231 (233)
T COG0670 181 LIFSGLIAYDTQNIKRMEGGERLAIMGALSLYLDFINLFLSLLRILGILSN 231 (233)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999984 688999999999999999999999999996543
No 5
>PF01027 Bax1-I: Inhibitor of apoptosis-promoting Bax1; InterPro: IPR006214 Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak) []. Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress []. BI-1 appears to exert its effect through an interaction with calmodulin [].
Probab=100.00 E-value=8.4e-32 Score=221.30 Aligned_cols=186 Identities=40% Similarity=0.615 Sum_probs=161.6
Q ss_pred CchHHHHHHHHHHHchHHHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHHHHH---hhcccchhH--HHHHHHHHH
Q psy15527 1 MQLLATVTVIILFTFVQDIKDFVHRKSSENLDLEHALSDWLVLVSLFATIGLLIGLH---VKRLDHPVN--LYLLAGFTM 75 (207)
Q Consensus 1 ~QLliT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~---~~~~~~p~~--~~ll~~ft~ 75 (207)
.|+.+|.+.++.....| .+..+ ++|..+.+.+++++..+... .++|++|.| ...+..||.
T Consensus 13 ~~l~it~~~~~~~~~~~---~~~~~------------~~~~~~~~~i~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~t~ 77 (205)
T PF01027_consen 13 LQLAITALGAFLVLASP---LFLSQ------------HFPLSWVSLIVSLVLLIFLYILFNRRRRFPSNVALILLFIFTL 77 (205)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHh------------ccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 37888966766666666 45544 56777777777777663322 234555655 999999999
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Q psy15527 76 VQAFTLGIVVTFYSQMVVLQAIFLTFLVVAGLTSFTFQSKRDFSVMGSGLFAALIILIGVSIIQIFFNNSLLDLVISFAG 155 (207)
Q Consensus 76 ~~g~~l~~~~~~~~~~~i~~A~~~T~~if~~ltl~a~~tk~df~~~~~~L~~~l~~liv~~l~~~f~~~~~~~~~~s~~g 155 (207)
.+|...++++..++++.+.+|+..|+++|++++++++++|+|++++++.++.++.+++++++.++|++++..+.+++++|
T Consensus 78 ~~g~~~~~i~~~~~~~~v~~a~~~T~~if~~l~~~a~~~~~d~~~~~~~l~~~l~~l~i~~l~~~f~~~~~~~~~is~~~ 157 (205)
T PF01027_consen 78 LEGLLLGPISSFYDPSIVLQAFLLTAAIFIALTLYAFFTKRDFTRWGGILFIGLIGLIIFGLVSIFLPSSPLYLLISYIG 157 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh-hCCchHH-HHHHHHHHHHHHHHHHHHHHHH
Q psy15527 156 AIVFSLFIIFDTHMIMQ-KVSAEEY-ILATITLYMDILNLFMYILRIL 201 (207)
Q Consensus 156 ~~lf~~~l~~Dtq~i~~-~~~~~d~-i~~Al~LYlDiInlFl~iL~il 201 (207)
+++|+++++||||+++| +.++||+ +.+|++||+|++|+|+++||++
T Consensus 158 ~~lf~~~l~~Dt~~i~~~~~~~~~~~i~~Al~Ly~d~i~lF~~iL~ll 205 (205)
T PF01027_consen 158 ILLFSLYLVYDTQRIIRRYFSPDDYAIIAALSLYLDIINLFLRILRLL 205 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999986 4567887 9999999999999999999985
No 6
>KOG1629|consensus
Probab=99.88 E-value=1.9e-21 Score=157.02 Aligned_cols=161 Identities=25% Similarity=0.442 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHH---hchhHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Q psy15527 43 LVSLFATIGLLIGLHVKRLDHPVNLYLLAGFTMVQAFTLGIVVTF---YSQMVVLQAIFLTFLVVAGLTSFTFQSK-RDF 118 (207)
Q Consensus 43 ~~~~i~~i~~~~~l~~~~~~~p~~~~ll~~ft~~~g~~l~~~~~~---~~~~~i~~A~~~T~~if~~ltl~a~~tk-~df 118 (207)
.++.++++++++++.+.+.++..++-++.+|+++.|..+||.... .||.++.+|+..|+++|.++++.|...+ |++
T Consensus 56 ~lsalg~l~~miwl~~~py~hk~rl~lL~~fa~l~GasvGP~i~~~ididpsIliTAf~GTav~F~cfSasAmlArrreY 135 (235)
T KOG1629|consen 56 LLSALGSLGLMIWLMFTPYEHKTRLGLLFLFAFLTGASVGPLIKFCIDIDPSILITAFVGTAVIFVCFSASAMLARRREY 135 (235)
T ss_pred hHHHHHHHHHHHHHhCCCCccchhHHHHHHHHHHcCCcccchhhheeccChHHHHHHHHhhHHHHHHHHHHHHHHhhhhh
Confidence 455567778888888777777778899999999999999998755 4899999999999999999999999855 799
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CCchHHHHHHHHHHHHHHHHHHH
Q psy15527 119 SVMGSGLFAALIILIGVSIIQIFFNNSLLDLVISFAGAIVFSLFIIFDTHMIMQK--VSAEEYILATITLYMDILNLFMY 196 (207)
Q Consensus 119 ~~~~~~L~~~l~~liv~~l~~~f~~~~~~~~~~s~~g~~lf~~~l~~Dtq~i~~~--~~~~d~i~~Al~LYlDiInlFl~ 196 (207)
-++|+.|..++..+...++.+.+++|.+..-.-.+.|+++|++|+++|||.|+++ .++.||+.+|+.+|.|++.+|.+
T Consensus 136 LylGg~L~s~~s~l~wl~l~n~~fgS~~v~~~qLY~Gllvfvg~ivvdTQ~IiEKah~GdmDyv~Hsl~lf~dfvsvF~r 215 (235)
T KOG1629|consen 136 LYLGGLLSSGLSLLLWLSLANSFFGSIWVFKFQLYVGLLVFVGFIVVDTQEIIEKAHHGDMDYVQHSLDLFTDFVSVFRR 215 (235)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhheeEEeeHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888888889999999999999999999975 47899999999999999999999
Q ss_pred HHHHHHh
Q psy15527 197 ILRILEA 203 (207)
Q Consensus 197 iL~il~~ 203 (207)
+|.|+-.
T Consensus 216 iLiIl~~ 222 (235)
T KOG1629|consen 216 ILIILAM 222 (235)
T ss_pred HHHHHhh
Confidence 9999853
No 7
>KOG1630|consensus
Probab=99.75 E-value=1.4e-17 Score=139.38 Aligned_cols=188 Identities=21% Similarity=0.311 Sum_probs=151.4
Q ss_pred hHHHHHHHHHHHchHHHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHHHHHhh-----cccch-hHHHHHHHHHHH
Q psy15527 3 LLATVTVIILFTFVQDIKDFVHRKSSENLDLEHALSDWLVLVSLFATIGLLIGLHVK-----RLDHP-VNLYLLAGFTMV 76 (207)
Q Consensus 3 LliT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~-----~~~~p-~~~~ll~~ft~~ 76 (207)
..+|.+.+.....+|.+.+++.+ ..|+.. ++++..++..-.. .++.| .+.....+....
T Consensus 126 ~~lTA~savA~~rs~~lm~l~~r------------gg~va~---~~tla~mi~sG~larsi~Yq~g~gaKhLAW~lHc~v 190 (336)
T KOG1630|consen 126 CGLTAASAVAISRSPALMNLMMR------------GGWVAI---GVTLAAMIGSGMLARSIEYQPGPGAKHLAWLLHCGV 190 (336)
T ss_pred HHHHHHHHHHHhccHHHHHHHhc------------CchHHH---HHHHHHHHhcchhhhcccCCCCccHHHHHHHHHHHH
Confidence 35677777788899999999998 656543 3444444322221 12222 556778889999
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHHHHhcc-----hHHHHH
Q psy15527 77 QAFTLGIVVTFYSQMVVLQAIFLTFLVVAGLTSFTFQSKR-DFSVMGSGLFAALIILIGVSIIQIFFNN-----SLLDLV 150 (207)
Q Consensus 77 ~g~~l~~~~~~~~~~~i~~A~~~T~~if~~ltl~a~~tk~-df~~~~~~L~~~l~~liv~~l~~~f~~~-----~~~~~~ 150 (207)
.|-.++|+|.. ..++...|...|++++.+++..+.+.+. .|..+++.|-+++-+.++.++-++|.|. ..+..+
T Consensus 191 lGAV~APlc~l-gGPiLtrAa~YTaGIVGgLStvA~cAPSeKFL~MggPLaiGlGvVFvssl~sm~LPPtta~GA~LaSm 269 (336)
T KOG1630|consen 191 LGAVVAPLCFL-GGPILTRAAWYTAGIVGGLSTVAACAPSEKFLNMGGPLAIGLGVVFVSSLGSMFLPPTTALGAGLASM 269 (336)
T ss_pred HHHHHhhHHhc-ccHHHHHHHHHHccccchhhhhhhcCcHHHHhhcCCCceeeeeeEehhhhhhhhcCCchhhhhhhHHH
Confidence 99999999987 5668999999999999999999999884 6999999999999999999999999973 346778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh---C------CchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy15527 151 ISFAGAIVFSLFIIFDTHMIMQK---V------SAEEYILATITLYMDILNLFMYILRILEALNR 206 (207)
Q Consensus 151 ~s~~g~~lf~~~l~~Dtq~i~~~---~------~~~d~i~~Al~LYlDiInlFl~iL~il~~~~~ 206 (207)
-.+.|+++|++++.||||++.++ + ..-|.+-+++++|+|..|+|++|..|++.-+|
T Consensus 270 slYGGLiLFS~FLLYDTQr~vk~ae~ypq~s~~~~~dPin~~msiymdvlnifiriv~il~ggqr 334 (336)
T KOG1630|consen 270 SLYGGLILFSGFLLYDTQRVVKSAEKYPQYSEFPNYDPINACMSIYMDVLNIFIRIVMILGGGQR 334 (336)
T ss_pred HHhccHHHHHHHHHHhHHHHHHHHHhCcchhccCCCCchHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 88999999999999999999853 1 12578999999999999999999999986543
No 8
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=99.67 E-value=4.6e-14 Score=120.96 Aligned_cols=163 Identities=20% Similarity=0.265 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHHHHHHHhc-------hhHHHHHHHHHHHHHHHHHHHHH
Q psy15527 41 LVLVSLFATIGLLIGLHVKRLD-HPVNLYLLAGFTMVQAFTLGIVVTFYS-------QMVVLQAIFLTFLVVAGLTSFTF 112 (207)
Q Consensus 41 ~~~~~~i~~i~~~~~l~~~~~~-~p~~~~ll~~ft~~~g~~l~~~~~~~~-------~~~i~~A~~~T~~if~~ltl~a~ 112 (207)
+.+++.++.+++.+..+++|+. +| .+-..|+++||+.+|.+...++ |+++.+|...|.++|++|. ..+
T Consensus 90 ~~~~g~i~glvl~lv~~F~~~~~sp---~l~~~YA~~EG~flG~iS~~f~~~~~~~~pGIv~qAvl~T~~vf~~ml-~lY 165 (274)
T PF12811_consen 90 LAIVGAIGGLVLALVISFKRKVWSP---ALAPIYAVLEGVFLGGISAVFENIYYSRYPGIVFQAVLGTFGVFAVML-ALY 165 (274)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCCh---HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHH-HHH
Confidence 3456667777777777777665 67 4557899999999999876653 7899999999999999884 477
Q ss_pred hcc--ccccchhHHHHHHHHHHHHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhhh----CCchH
Q psy15527 113 QSK--RDFSVMGSGLFAALIILIGVSIIQIFF--------NNSLLDLVISFAGAIVFSLFIIFDTHMIMQK----VSAEE 178 (207)
Q Consensus 113 ~tk--~df~~~~~~L~~~l~~liv~~l~~~f~--------~~~~~~~~~s~~g~~lf~~~l~~Dtq~i~~~----~~~~d 178 (207)
+++ |.-.++.+....+..+..++.++++.. .+..+.+.+|.+++.+-++.++.|++.+.+. .+++.
T Consensus 166 k~g~IrvT~kf~~iv~~a~~gi~~~~Lv~~vl~lf~~~l~~~gplgI~~slv~v~iAa~sLllDFd~Ie~~v~~gaPk~~ 245 (274)
T PF12811_consen 166 KTGIIRVTPKFRRIVMIATFGIALFYLVNLVLSLFVGSLRDGGPLGIGFSLVVVGIAALSLLLDFDFIEQGVRQGAPKKM 245 (274)
T ss_pred HhCCeeechHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHcCCChhh
Confidence 665 566688888888888888888877532 1356889999999999999999999999863 34566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy15527 179 YILATITLYMDILNLFMYILRILEALNRQ 207 (207)
Q Consensus 179 ~i~~Al~LYlDiInlFl~iL~il~~~~~~ 207 (207)
.+.+|++|=+.++++|+++||+++.++++
T Consensus 246 eW~~AfGL~vTLVWLYlEILRLL~~l~~~ 274 (274)
T PF12811_consen 246 EWYAAFGLLVTLVWLYLEILRLLSKLQND 274 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999998764
No 9
>COG4760 Predicted membrane protein [Function unknown]
Probab=98.91 E-value=4.8e-07 Score=74.51 Aligned_cols=162 Identities=17% Similarity=0.245 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHh-hcccchhHHHHHHHHHHHHHHHHHHHHHHh---------chhHHHHHHHHHHHHHHHHHHH
Q psy15527 41 LVLVSLFATIGLLIGLHV-KRLDHPVNLYLLAGFTMVQAFTLGIVVTFY---------SQMVVLQAIFLTFLVVAGLTSF 110 (207)
Q Consensus 41 ~~~~~~i~~i~~~~~l~~-~~~~~p~~~~ll~~ft~~~g~~l~~~~~~~---------~~~~i~~A~~~T~~if~~ltl~ 110 (207)
..+++.+..+++.+...+ +++.+| +.-..|+..+|+.+|.+.... ....|.+|.+.|.++|.+| +.
T Consensus 86 ltlvGaiGGlilvLvatFgkK~~sp---ai~l~YAv~EGlFlGaiS~lla~ftV~~anaGgligqAvLgT~Gvf~gM-L~ 161 (276)
T COG4760 86 LTLVGAIGGLILVLVATFGKKQWSP---AIVLSYAVLEGLFLGAISFLLANFTVYEANAGGLIGQAVLGTFGVFFGM-LV 161 (276)
T ss_pred HhHHHHhhhHHHHHHHHhccccCCh---HHHHHHHHHHHHHHHHHHHHhccceEEeccccceeHHHHHHHHHHHHHH-HH
Confidence 455555666655554444 667788 566889999999999887432 2578999999999999999 67
Q ss_pred HHhcc--ccccchhHHHHHHHH---HHHHHHHHH-HHhc--ch------HHHHHHHHHHHHHHHHHHHHHHHHHhh----
Q psy15527 111 TFQSK--RDFSVMGSGLFAALI---ILIGVSIIQ-IFFN--NS------LLDLVISFAGAIVFSLFIIFDTHMIMQ---- 172 (207)
Q Consensus 111 a~~tk--~df~~~~~~L~~~l~---~liv~~l~~-~f~~--~~------~~~~~~s~~g~~lf~~~l~~Dtq~i~~---- 172 (207)
.|+|. |--.+..+.+..+.. +++...++. +|.+ ++ .+.+++|...+.+-++-.+.|++..-+
T Consensus 162 vYktGaIkvTpkF~r~v~a~~~Gvl~L~Lgn~vla~F~Gg~~pllr~gG~~~IiFSLfcigiAAf~fllDFDaad~~vr~ 241 (276)
T COG4760 162 VYKTGAIKVTPKFTRMVVAATFGVLVLMLGNFVLAMFVGGGIPLLRSGGPFGIIFSLFCIGIAAFSFLLDFDAADQMVRA 241 (276)
T ss_pred HHhcCceeecchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCceEeeHHHHHHHHHHHHHHhhhhHHHHHHHc
Confidence 88765 333344444444443 344434433 3322 22 355677766666666666666665543
Q ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy15527 173 KVSAEEYILATITLYMDILNLFMYILRILEALNR 206 (207)
Q Consensus 173 ~~~~~d~i~~Al~LYlDiInlFl~iL~il~~~~~ 206 (207)
..+++..+-.|++|-...+++|+++||+++...+
T Consensus 242 GAP~kmaWgvAlGL~VTLVWLY~EiLRLLSy~Qn 275 (276)
T COG4760 242 GAPEKMAWGVALGLTVTLVWLYLEILRLLSYLQN 275 (276)
T ss_pred CChhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhc
Confidence 2345667999999999999999999999998754
No 10
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=87.85 E-value=23 Score=32.84 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=23.9
Q ss_pred chHHHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q psy15527 15 FVQDIKDFVHRKSSENLDLEHALSDWLVLVSLFATIGLLIGLHVKRLDHPVNLYLL 70 (207)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~~~~~p~~~~ll 70 (207)
+.+|+.++-+. ||+....+.++++-.....++=+..++|=||.+|.+.
T Consensus 284 l~~Pvd~Y~~~--------~Ra~KYgiLFI~LTF~~fflfE~~~~~~iHpiQY~LV 331 (430)
T PF06123_consen 284 LIEPVDHYQKS--------ERAVKYGILFIGLTFLAFFLFELLSKLRIHPIQYLLV 331 (430)
T ss_pred EeccccHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 45666666665 4554444444332211111222224566799988653
No 11
>PRK11715 inner membrane protein; Provisional
Probab=81.92 E-value=44 Score=31.05 Aligned_cols=48 Identities=21% Similarity=0.320 Sum_probs=24.7
Q ss_pred chHHHHHHHhhhccccchhhhhhhhHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q psy15527 15 FVQDIKDFVHRKSSENLDLEHALSDWLVLVSLFATIGLLIGLHVKRLDHPVNLYLL 70 (207)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~~~~~p~~~~ll 70 (207)
+.+|+.++.+. ||+....+.++++-.....++=...+.|=||..|.+.
T Consensus 290 ~~~PVd~Y~~~--------~RA~KYgiLFI~LTF~~fFlfE~~~~~~iHpiQYlLV 337 (436)
T PRK11715 290 LIDPVDQYQKT--------ERAVKYAILFIALTFAAFFLFELLKKLRIHPVQYLLV 337 (436)
T ss_pred EeccccHHHHH--------HHHHhHHHHHHHHHHHHHHHHHHhcCceecHHHHHHH
Confidence 55666677665 5665554444432222111222223456799988653
No 12
>KOG3488|consensus
Probab=79.63 E-value=18 Score=25.06 Aligned_cols=57 Identities=18% Similarity=0.427 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHH-------HHHHHhhhC-CchHH----HHHHHHHHHHHHHHHHHHHHHHHh
Q psy15527 147 LDLVISFAGAIVFSLFIIF-------DTHMIMQKV-SAEEY----ILATITLYMDILNLFMYILRILEA 203 (207)
Q Consensus 147 ~~~~~s~~g~~lf~~~l~~-------Dtq~i~~~~-~~~d~----i~~Al~LYlDiInlFl~iL~il~~ 203 (207)
..+...++...+|.-|+++ |-+.++|++ -|+|| ..+|.-.-+-+|..|+..+.+=++
T Consensus 8 vgl~lv~iSl~iFtYYT~WViilPFvDs~hiihKyFLpr~yAi~iPvaagl~ll~lig~Fis~vMlKsk 76 (81)
T KOG3488|consen 8 VGLMLVYISLAIFTYYTIWVIILPFVDSMHIIHKYFLPREYAITIPVAAGLFLLCLIGTFISLVMLKSK 76 (81)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHhcChhHHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 3455566666777777664 778888764 57776 345555667899999998877554
No 13
>KOG3103|consensus
Probab=37.87 E-value=2.6e+02 Score=23.94 Aligned_cols=61 Identities=16% Similarity=0.216 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHH
Q psy15527 91 MVVLQAIFLTFLVVAGLTSFTFQSKRDFSVMGSGLFAALIILIGVSIIQIFFNN-SLLDLVIS 152 (207)
Q Consensus 91 ~~i~~A~~~T~~if~~ltl~a~~tk~df~~~~~~L~~~l~~liv~~l~~~f~~~-~~~~~~~s 152 (207)
-+...+...|..++..+.+.+ .++..|....+.+-..++=+.+.+.++++.+. .....+++
T Consensus 143 yIygi~~~gsl~iy~L~nlm~-~~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~ 204 (249)
T KOG3103|consen 143 YIYGISLLGSLSIYFLLNLMS-NKNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILS 204 (249)
T ss_pred EEeeeHHHHHHHHHHHHHHHh-hcCcceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 445566777888888888888 55568888888888888888889999988863 33334443
No 14
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=33.23 E-value=2.1e+02 Score=22.72 Aligned_cols=18 Identities=17% Similarity=0.375 Sum_probs=9.3
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q psy15527 38 SDWLVLVSLFATIGLLIGL 56 (207)
Q Consensus 38 ~~~~~~~~~i~~i~~~~~l 56 (207)
|||++ ++|.++......+
T Consensus 35 HP~L~-~~M~~~y~~~~~l 52 (155)
T PF10777_consen 35 HPYLC-LAMYAAYLAVAAL 52 (155)
T ss_pred CcHHH-HHHHHHHHHHHHH
Confidence 77765 4555554444333
No 15
>COG2917 Intracellular septation protein A [Cell division and chromosome partitioning]
Probab=26.91 E-value=3.5e+02 Score=22.06 Aligned_cols=68 Identities=15% Similarity=0.292 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHHHHhh----hCC-chH------HHHHHHHHHHHHHH
Q psy15527 129 LIILIGVSIIQIFFNNSL-----LDLVISFAGAIVFSLFIIFDTHMIMQ----KVS-AEE------YILATITLYMDILN 192 (207)
Q Consensus 129 l~~liv~~l~~~f~~~~~-----~~~~~s~~g~~lf~~~l~~Dtq~i~~----~~~-~~d------~i~~Al~LYlDiIn 192 (207)
....+++|...++++++. ...++...+.++-.--...+.+.+++ +.+ ||+ +.++..-+++-++|
T Consensus 55 ~~~v~vFG~lTl~f~~d~FIKwK~TIi~~lFa~~Llgs~~~~~k~lik~~lg~~l~Lp~~~W~~Ln~~W~~FFlf~ai~N 134 (180)
T COG2917 55 GVVVVVFGGLTLIFHNDTFIKWKPTIIYWLFALVLLGSQFLFKKPLIKRMLGKELQLPEEVWRKLNLRWALFFLFCAIAN 134 (180)
T ss_pred HHHHHHhchhHhhccCcceEEeeHHHHHHHHHHHHHHHHHHhcCcHHHHHHHhhhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567777777776532 22333333333333244566666654 222 232 46777777788888
Q ss_pred HHHH
Q psy15527 193 LFMY 196 (207)
Q Consensus 193 lFl~ 196 (207)
.++.
T Consensus 135 ~yV~ 138 (180)
T COG2917 135 EYVA 138 (180)
T ss_pred HHHH
Confidence 7653
No 16
>PF11992 DUF3488: Domain of unknown function (DUF3488); InterPro: IPR021878 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is typically between 323 to 339 amino acids in length. This domain is found associated with PF01841 from PFAM. This domain has a conserved PLW sequence motif. This domain contains 6 transmembrane helices.
Probab=25.51 E-value=4.6e+02 Score=22.95 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=18.7
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy15527 88 YSQMVVLQAIFLTFLVVAGLTSFTFQSKRDFS 119 (207)
Q Consensus 88 ~~~~~i~~A~~~T~~if~~ltl~a~~tk~df~ 119 (207)
++......+...-.....++=++-.+++||.-
T Consensus 72 ~~~~~~~~~~v~lL~~l~~lKlle~k~~RD~~ 103 (325)
T PF11992_consen 72 YGSLFGLDAGVALLLLLLALKLLELKTRRDYY 103 (325)
T ss_pred HcccccHHHHHHHHHHHHHHHHHhccccccHH
Confidence 44444555555555555555566666778854
No 17
>PF14147 Spore_YhaL: Sporulation protein YhaL
Probab=21.99 E-value=1.6e+02 Score=19.07 Aligned_cols=25 Identities=20% Similarity=0.230 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q psy15527 149 LVISFAGAIVFSLFIIFDTHMIMQK 173 (207)
Q Consensus 149 ~~~s~~g~~lf~~~l~~Dtq~i~~~ 173 (207)
++|.++..++||+|.+.-|-+--++
T Consensus 4 WvY~vi~gI~~S~ym~v~t~~eE~~ 28 (52)
T PF14147_consen 4 WVYFVIAGIIFSGYMAVKTAKEERE 28 (52)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777899999999988776543
Done!