Query psy15532
Match_columns 60
No_of_seqs 111 out of 1202
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 23:45:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kdg_A CDH, cellobiose dehydro 99.9 1.7E-24 5.7E-29 150.7 6.2 59 1-60 487-545 (546)
2 3t37_A Probable dehydrogenase; 99.9 1.3E-23 4.3E-28 144.1 5.3 53 1-55 469-521 (526)
3 1gpe_A Protein (glucose oxidas 99.9 2.5E-23 8.5E-28 147.4 5.2 58 1-59 527-584 (587)
4 2jbv_A Choline oxidase; alcoho 99.9 3.1E-23 1E-27 145.7 5.2 59 1-59 473-531 (546)
5 3q9t_A Choline dehydrogenase a 99.9 1.3E-22 4.3E-27 144.4 6.0 58 1-59 517-574 (577)
6 3qvp_A Glucose oxidase; oxidor 99.9 9.7E-23 3.3E-27 145.4 5.2 58 1-59 523-580 (583)
7 3fim_B ARYL-alcohol oxidase; A 99.9 6.4E-22 2.2E-26 140.6 6.0 56 1-57 509-565 (566)
8 1n4w_A CHOD, cholesterol oxida 99.8 1.7E-21 5.9E-26 135.2 5.7 51 9-59 451-501 (504)
9 1coy_A Cholesterol oxidase; ox 99.8 9.9E-21 3.4E-25 131.7 5.7 49 9-57 456-504 (507)
10 3pl8_A Pyranose 2-oxidase; sub 99.8 1.1E-20 3.9E-25 134.8 6.1 59 1-59 555-614 (623)
11 1ju2_A HydroxynitrIle lyase; f 99.8 4.6E-20 1.6E-24 129.3 5.2 49 9-57 468-516 (536)
12 4g6h_A Rotenone-insensitive NA 92.6 0.11 3.7E-06 36.0 3.5 44 10-56 354-398 (502)
13 3hyw_A Sulfide-quinone reducta 92.6 0.34 1.2E-05 32.4 5.9 49 10-58 276-332 (430)
14 3f8d_A Thioredoxin reductase ( 89.4 1.1 3.8E-05 27.6 5.6 46 9-57 269-315 (323)
15 3h28_A Sulfide-quinone reducta 87.6 1.7 5.7E-05 28.9 5.9 50 9-58 275-332 (430)
16 3h8l_A NADH oxidase; membrane 87.0 1.6 5.4E-05 28.6 5.4 47 9-58 288-335 (409)
17 3sx6_A Sulfide-quinone reducta 86.8 2 6.7E-05 28.6 5.9 50 9-58 286-343 (437)
18 4dgk_A Phytoene dehydrogenase; 84.0 1.2 4E-05 29.8 3.7 41 14-58 451-491 (501)
19 1fl2_A Alkyl hydroperoxide red 81.3 4.3 0.00015 25.1 5.4 43 10-57 260-303 (310)
20 3r9u_A Thioredoxin reductase; 80.2 4.5 0.00015 24.8 5.2 44 9-57 266-310 (315)
21 3lzw_A Ferredoxin--NADP reduct 77.7 5.5 0.00019 24.6 5.0 46 10-58 268-314 (332)
22 2q0l_A TRXR, thioredoxin reduc 77.1 6.7 0.00023 24.2 5.3 45 9-58 263-308 (311)
23 3ab1_A Ferredoxin--NADP reduct 75.7 7 0.00024 24.8 5.2 45 10-57 281-326 (360)
24 2ywl_A Thioredoxin reductase r 75.2 8.1 0.00028 22.0 5.1 42 11-57 127-169 (180)
25 2q7v_A Thioredoxin reductase; 74.6 8.7 0.0003 23.9 5.4 44 9-57 266-310 (325)
26 2zbw_A Thioredoxin reductase; 73.0 8.8 0.0003 23.9 5.1 45 10-57 270-315 (335)
27 1vdc_A NTR, NADPH dependent th 72.3 8.9 0.00031 23.8 5.0 44 10-57 277-321 (333)
28 3vrd_B FCCB subunit, flavocyto 71.0 11 0.00039 24.3 5.4 47 9-58 274-323 (401)
29 3cty_A Thioredoxin reductase; 68.0 15 0.00053 22.7 5.4 44 10-58 271-315 (319)
30 3fbs_A Oxidoreductase; structu 67.3 14 0.00046 22.3 5.0 43 10-58 248-291 (297)
31 4at0_A 3-ketosteroid-delta4-5a 66.9 10 0.00036 25.8 4.8 46 9-56 459-508 (510)
32 3nlc_A Uncharacterized protein 64.6 6.5 0.00022 27.8 3.5 44 10-58 498-542 (549)
33 2a87_A TRXR, TR, thioredoxin r 62.8 19 0.00066 22.5 5.2 44 10-57 270-314 (335)
34 1y56_A Hypothetical protein PH 62.6 18 0.00061 24.6 5.3 43 10-59 335-377 (493)
35 1trb_A Thioredoxin reductase; 62.6 20 0.00067 22.0 5.1 45 10-58 264-313 (320)
36 3ntd_A FAD-dependent pyridine 60.6 14 0.00047 25.2 4.4 46 9-55 285-336 (565)
37 1hyu_A AHPF, alkyl hydroperoxi 60.1 21 0.00073 24.4 5.3 43 9-56 470-513 (521)
38 1y0p_A Fumarate reductase flav 59.2 15 0.00051 25.3 4.5 48 10-57 511-567 (571)
39 1lqt_A FPRA; NADP+ derivative, 58.7 7.6 0.00026 26.3 2.9 44 10-57 341-385 (456)
40 2h88_A Succinate dehydrogenase 58.4 17 0.00058 25.9 4.7 48 10-57 371-431 (621)
41 3d1c_A Flavin-containing putat 58.1 23 0.00079 22.2 4.9 48 10-58 290-338 (369)
42 2bs2_A Quinol-fumarate reducta 57.1 16 0.00054 26.3 4.4 46 10-56 376-426 (660)
43 4a9w_A Monooxygenase; baeyer-v 56.7 29 0.00098 21.3 5.1 46 10-58 303-351 (357)
44 1qo8_A Flavocytochrome C3 fuma 55.6 23 0.0008 24.4 4.9 48 10-57 506-562 (566)
45 2bc0_A NADH oxidase; flavoprot 55.1 14 0.00049 24.9 3.8 46 9-55 308-359 (490)
46 1cjc_A Protein (adrenodoxin re 55.1 8.9 0.0003 26.0 2.7 45 10-58 349-394 (460)
47 3cgb_A Pyridine nucleotide-dis 52.6 22 0.00076 23.9 4.4 45 10-55 301-351 (480)
48 2cdu_A NADPH oxidase; flavoenz 51.1 12 0.00043 24.8 2.9 46 9-55 264-315 (452)
49 3iwa_A FAD-dependent pyridine 50.6 13 0.00044 24.8 2.9 46 9-55 276-327 (472)
50 4eqs_A Coenzyme A disulfide re 50.5 22 0.00075 23.7 4.1 45 10-55 259-309 (437)
51 3kd9_A Coenzyme A disulfide re 49.1 31 0.0011 22.8 4.6 46 9-55 262-313 (449)
52 2wdq_A Succinate dehydrogenase 48.7 19 0.00065 25.3 3.7 47 10-56 361-421 (588)
53 1d4d_A Flavocytochrome C fumar 48.1 28 0.00095 24.2 4.4 48 10-57 511-568 (572)
54 1kf6_A Fumarate reductase flav 46.7 29 0.00099 24.5 4.3 46 10-56 363-413 (602)
55 3ka7_A Oxidoreductase; structu 45.8 25 0.00085 22.6 3.7 38 16-55 387-424 (425)
56 3fg2_P Putative rubredoxin red 45.0 19 0.00064 23.5 3.0 47 9-56 257-309 (404)
57 3itj_A Thioredoxin reductase 1 44.0 53 0.0018 20.0 5.7 43 11-58 291-334 (338)
58 1chu_A Protein (L-aspartate ox 42.8 40 0.0014 23.3 4.5 47 10-57 358-409 (540)
59 2gqw_A Ferredoxin reductase; f 42.4 25 0.00086 23.1 3.3 47 9-56 255-307 (408)
60 1nhp_A NADH peroxidase; oxidor 41.8 14 0.00046 24.5 2.0 45 10-55 264-314 (447)
61 4gcm_A TRXR, thioredoxin reduc 40.4 62 0.0021 19.8 5.3 42 10-56 261-303 (312)
62 3ef6_A Toluene 1,2-dioxygenase 39.8 36 0.0012 22.2 3.8 47 9-56 257-308 (410)
63 3f8x_A Putative delta-5-3-keto 38.6 41 0.0014 19.5 3.6 43 16-58 104-147 (148)
64 3fpz_A Thiazole biosynthetic e 38.3 4.5 0.00015 25.7 -0.8 48 10-58 273-324 (326)
65 1m6i_A Programmed cell death p 38.3 14 0.00047 25.1 1.6 45 9-55 301-350 (493)
66 3ics_A Coenzyme A-disulfide re 38.1 49 0.0017 22.7 4.4 46 10-56 301-352 (588)
67 3l8k_A Dihydrolipoyl dehydroge 37.3 69 0.0024 21.3 4.9 42 9-56 290-332 (466)
68 2cul_A Glucose-inhibited divis 36.9 59 0.002 19.4 4.2 35 19-58 197-231 (232)
69 3dk9_A Grase, GR, glutathione 36.1 69 0.0024 21.3 4.8 41 10-56 314-355 (478)
70 2yg5_A Putrescine oxidase; oxi 35.8 67 0.0023 20.8 4.6 38 20-59 415-452 (453)
71 3lxd_A FAD-dependent pyridine 34.4 39 0.0013 22.0 3.2 47 9-56 267-320 (415)
72 1mo9_A ORF3; nucleotide bindin 33.5 70 0.0024 21.7 4.5 41 9-55 335-376 (523)
73 2vdc_G Glutamate synthase [NAD 32.6 95 0.0032 20.9 5.0 42 10-57 399-442 (456)
74 3mso_A Steroid delta-isomerase 31.3 35 0.0012 19.4 2.4 43 16-58 95-138 (143)
75 1xhc_A NADH oxidase /nitrite r 30.5 86 0.003 20.2 4.4 45 9-55 250-295 (367)
76 3gwf_A Cyclohexanone monooxyge 30.5 91 0.0031 21.5 4.7 39 15-56 416-454 (540)
77 1uxy_A MURB, uridine diphospho 30.4 78 0.0027 21.0 4.3 42 19-60 271-318 (340)
78 3i99_A UDP-N-acetylenolpyruvoy 29.9 77 0.0026 21.2 4.2 42 19-60 285-332 (357)
79 2e5v_A L-aspartate oxidase; ar 29.8 22 0.00076 24.0 1.5 45 10-55 320-369 (472)
80 3urh_A Dihydrolipoyl dehydroge 29.3 1E+02 0.0035 20.5 4.8 41 9-55 320-361 (491)
81 7cei_B Protein (colicin E7 imm 29.2 23 0.00078 22.7 1.4 17 10-26 178-194 (206)
82 2wpf_A Trypanothione reductase 28.9 1E+02 0.0035 20.8 4.7 41 10-56 313-354 (495)
83 3tx1_A UDP-N-acetylenolpyruvoy 28.6 88 0.003 20.5 4.2 42 19-60 262-309 (322)
84 4fk1_A Putative thioredoxin re 28.5 69 0.0024 19.7 3.6 43 10-57 255-298 (304)
85 1q1r_A Putidaredoxin reductase 28.2 58 0.002 21.5 3.3 46 9-55 266-317 (431)
86 1v59_A Dihydrolipoamide dehydr 28.0 1.3E+02 0.0044 19.9 5.0 42 9-56 307-349 (478)
87 1zk7_A HGII, reductase, mercur 27.5 1.2E+02 0.0042 20.0 4.8 40 10-55 292-332 (467)
88 2jb0_B Colicin E7; hydrolase/i 26.4 22 0.00074 21.2 0.9 17 10-26 103-119 (131)
89 1dxl_A Dihydrolipoamide dehydr 26.3 1.4E+02 0.0048 19.6 4.9 41 9-55 299-340 (470)
90 3klj_A NAD(FAD)-dependent dehy 25.9 1.1E+02 0.0037 20.0 4.3 46 8-55 246-292 (385)
91 1zmd_A Dihydrolipoyl dehydroge 25.4 1.4E+02 0.0047 19.8 4.8 41 9-55 302-343 (474)
92 1ojt_A Surface protein; redox- 25.1 1.3E+02 0.0045 20.0 4.7 41 9-55 306-347 (482)
93 1fr2_B Colicin E9; protein-pro 25.0 22 0.00074 21.3 0.7 17 10-26 106-122 (134)
94 1onf_A GR, grase, glutathione 24.9 1.3E+02 0.0043 20.3 4.6 20 10-30 295-315 (500)
95 2qae_A Lipoamide, dihydrolipoy 24.7 1.4E+02 0.0048 19.7 4.7 41 9-55 296-338 (468)
96 3dgz_A Thioredoxin reductase 2 24.4 1.5E+02 0.0053 19.7 4.9 41 10-56 309-351 (488)
97 1s3e_A Amine oxidase [flavin-c 24.4 1.4E+02 0.0049 19.9 4.7 38 20-59 418-455 (520)
98 2v3a_A Rubredoxin reductase; a 24.3 1.3E+02 0.0043 19.3 4.4 45 9-55 259-304 (384)
99 3kkj_A Amine oxidase, flavin-c 24.1 98 0.0034 17.0 5.4 35 19-59 293-328 (336)
100 1xdi_A RV3303C-LPDA; reductase 23.9 1.3E+02 0.0044 20.2 4.4 41 10-56 300-341 (499)
101 1lvl_A Dihydrolipoamide dehydr 23.7 1.4E+02 0.0048 19.7 4.6 40 10-55 288-328 (458)
102 4a5l_A Thioredoxin reductase; 23.4 1.3E+02 0.0044 18.1 5.9 46 6-56 263-309 (314)
103 3utn_X Thiosulfate sulfurtrans 23.1 14 0.00049 24.5 -0.4 14 15-28 134-147 (327)
104 1fec_A Trypanothione reductase 23.0 1.5E+02 0.0053 19.8 4.7 41 10-56 309-350 (490)
105 3qfa_A Thioredoxin reductase 1 22.5 1.7E+02 0.0057 19.9 4.8 42 9-55 336-378 (519)
106 2zk9_X Protein-glutaminase; de 21.9 63 0.0022 20.3 2.4 20 16-35 89-111 (185)
107 2gag_A Heterotetrameric sarcos 21.9 2E+02 0.007 21.4 5.5 44 10-59 396-444 (965)
108 1ebd_A E3BD, dihydrolipoamide 21.8 1.8E+02 0.006 19.1 4.8 41 9-55 290-331 (455)
109 3flj_A Uncharacterized protein 21.7 33 0.0011 20.4 1.1 43 16-58 102-145 (155)
110 4dna_A Probable glutathione re 21.6 1.8E+02 0.006 19.2 4.7 41 10-56 289-330 (463)
111 3lad_A Dihydrolipoamide dehydr 21.6 1.8E+02 0.0062 19.1 4.9 41 10-56 301-342 (476)
112 2yqu_A 2-oxoglutarate dehydrog 21.0 1.8E+02 0.0063 19.0 4.9 42 9-56 284-326 (455)
113 3oc4_A Oxidoreductase, pyridin 21.0 29 0.00098 23.0 0.7 25 9-34 261-286 (452)
114 3im4_C Dual specificity A kina 20.6 71 0.0024 15.6 1.9 14 44-57 15-28 (45)
115 2eq6_A Pyruvate dehydrogenase 20.2 2E+02 0.0068 19.0 4.8 41 9-55 291-332 (464)
116 3a54_A Protein-glutaminase; mu 20.1 68 0.0023 21.5 2.4 20 16-35 203-225 (305)
117 1qey_A MNT-C, protein (regulat 20.0 58 0.002 14.7 1.4 11 47-57 4-14 (31)
No 1
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.90 E-value=1.7e-24 Score=150.70 Aligned_cols=59 Identities=31% Similarity=0.441 Sum_probs=56.7
Q ss_pred CCCCCCCCceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhCC
Q psy15532 1 MGPASDPEAVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNKV 60 (60)
Q Consensus 1 Mg~~~~~~~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~~ 60 (60)
||+ ++.++|||+++||||++||||+|+|+||+.+++||++|++|+|||+|+.|++++++
T Consensus 487 MG~-~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~ 545 (546)
T 1kdg_A 487 IGS-SPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGG 545 (546)
T ss_dssp BCS-CTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTC
T ss_pred cCC-CCCCeeECCCCeEccCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcCC
Confidence 888 78899999999999999999999999999999999999999999999999998874
No 2
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.88 E-value=1.3e-23 Score=144.15 Aligned_cols=53 Identities=32% Similarity=0.408 Sum_probs=49.9
Q ss_pred CCCCCCCCceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 1 MGPASDPEAVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 1 Mg~~~~~~~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
||. ++ +||||++|||||++||||+|+|+||+++++||++|++|||||+||+.-
T Consensus 469 MG~-d~-~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~ 521 (526)
T 3t37_A 469 MGK-DP-DAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYH 521 (526)
T ss_dssp BCS-ST-TCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCC-CC-CccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhh
Confidence 886 65 799999999999999999999999999999999999999999999864
No 3
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.88 E-value=2.5e-23 Score=147.41 Aligned_cols=58 Identities=31% Similarity=0.392 Sum_probs=55.2
Q ss_pred CCCCCCCCceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 1 MGPASDPEAVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 1 Mg~~~~~~~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
||+ ++.+||||+++||||++||||+|+|+||+.+++||++|++|+|||+|+.|+++++
T Consensus 527 MG~-~~~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 527 MMS-RELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp BSC-GGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC-CCCCceECCCCEEECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 888 7788999999999999999999999999999999999999999999999998763
No 4
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.88 E-value=3.1e-23 Score=145.66 Aligned_cols=59 Identities=39% Similarity=0.655 Sum_probs=51.5
Q ss_pred CCCCCCCCceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 1 MGPASDPEAVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 1 Mg~~~~~~~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
||++++.++|||+++||||++||||+|+|+||+.+++||++|++|+|+|+|+.|++++.
T Consensus 473 MG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 531 (546)
T 2jbv_A 473 MGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARA 531 (546)
T ss_dssp BCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC-----
T ss_pred cCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhcc
Confidence 78545688999999999999999999999999999999999999999999999998764
No 5
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.87 E-value=1.3e-22 Score=144.43 Aligned_cols=58 Identities=40% Similarity=0.629 Sum_probs=55.4
Q ss_pred CCCCCCCCceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 1 MGPASDPEAVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 1 Mg~~~~~~~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
||+ ++.++|||+++||||++||||+|+||||+.+++||++|++|+|||+|+.|+++++
T Consensus 517 Mg~-~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 517 LSK-NIDQGVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp BCS-STTTCSBCTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred cCC-CCCCceECCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 888 6669999999999999999999999999999999999999999999999999875
No 6
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.87 E-value=9.7e-23 Score=145.40 Aligned_cols=58 Identities=33% Similarity=0.465 Sum_probs=55.1
Q ss_pred CCCCCCCCceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 1 MGPASDPEAVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 1 Mg~~~~~~~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
||+ ++.++|||+++||||++||||+|+||||+.+++||++|++|+|||+|+.|+++++
T Consensus 523 Mg~-~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 523 MMP-KEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp BSC-GGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCCCceECCCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 888 6678999999999999999999999999999999999999999999999998874
No 7
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.85 E-value=6.4e-22 Score=140.56 Aligned_cols=56 Identities=27% Similarity=0.507 Sum_probs=52.8
Q ss_pred CCCCCCCC-ceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 1 MGPASDPE-AVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 1 Mg~~~~~~-~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
||+ ++.+ +|||+++||||++||||+|+||||+.+++||++|++|+|||+|+.|+++
T Consensus 509 Mg~-~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 509 MSP-RGASWGVVDPDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp BCC-TTCSSCSBCTTCBBTTCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred cCC-cccCCccCCCCCeEccCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 888 5555 9999999999999999999999999999999999999999999999875
No 8
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.84 E-value=1.7e-21 Score=135.21 Aligned_cols=51 Identities=25% Similarity=0.421 Sum_probs=49.3
Q ss_pred ceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 9 AVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
+|||+++||||++||||+|+|+||+.+++||++|++|+|||+|++|++++.
T Consensus 451 ~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 451 KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 799999999999999999999999999999999999999999999998763
No 9
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.82 E-value=9.9e-21 Score=131.67 Aligned_cols=49 Identities=18% Similarity=0.290 Sum_probs=47.5
Q ss_pred ceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 9 AVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
+|||+++||||++||||+|+|+||+.+++||++|++|+|+|+|+.|+++
T Consensus 456 ~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~ 504 (507)
T 1coy_A 456 KATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISS 504 (507)
T ss_dssp TTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred heECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999865
No 10
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.82 E-value=1.1e-20 Score=134.83 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=55.7
Q ss_pred CCCCCCCCcee-cCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 1 MGPASDPEAVV-DDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 1 Mg~~~~~~~Vv-d~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
||.+++.+||| |+++||||++||||+|+|+||+.+++||++|++|+|+|+|++|+++++
T Consensus 555 mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~ 614 (623)
T 3pl8_A 555 MGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFT 614 (623)
T ss_dssp BCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhh
Confidence 88844999998 999999999999999999999999999999999999999999998874
No 11
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.79 E-value=4.6e-20 Score=129.30 Aligned_cols=49 Identities=27% Similarity=0.468 Sum_probs=45.8
Q ss_pred ceecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 9 AVVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
+|||+++||||++||||+|+||||+.+++||++|++|+|||+|+.|+++
T Consensus 468 ~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~ 516 (536)
T 1ju2_A 468 KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQE 516 (536)
T ss_dssp TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 6999999999999999999999999999999999999999988776543
No 12
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.56 E-value=0.11 Score=36.04 Aligned_cols=44 Identities=25% Similarity=0.182 Sum_probs=33.6
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
+||+++|+.+.+|+|++ |.+..|.++.+ -....-|..+|+.|.+
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a---~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTA---QVAHQEAEYLAKNFDK 398 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCH---HHHHHHHHHHHHHHHH
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCch---HHHHHHHHHHHHHHHH
Confidence 69999999999999999 88888866543 3355666777776643
No 13
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.55 E-value=0.34 Score=32.41 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=36.3
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCC-----CCCh--HHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQL-----NCNP--ISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~-----~~np--~~t~~ala~r~a~~i~~~~ 58 (60)
+||+.+|+-+++|+|.+ |.+.+|... ...| .......|..+|+.|.+.+
T Consensus 276 ~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l 332 (430)
T 3hyw_A 276 IVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp CCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999 888888542 2223 2356667788888877654
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.39 E-value=1.1 Score=27.63 Aligned_cols=46 Identities=17% Similarity=0.122 Sum_probs=31.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
=.||++++. .++|+|++ |..-.| +........+.-|..+|+.|.+.
T Consensus 269 i~vd~~~~t-~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~ 315 (323)
T 3f8d_A 269 IKVDEWMRT-SVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRY 315 (323)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCcee-cCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHH
Confidence 367888887 89999999 666555 33344555666667777666543
No 15
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=87.58 E-value=1.7 Score=28.86 Aligned_cols=50 Identities=10% Similarity=0.032 Sum_probs=35.3
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCC-----C--CChHHHHHHHHHHHHHHHHhhh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQL-----N--CNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~-----~--~np~~t~~ala~r~a~~i~~~~ 58 (60)
=.||+++|...++|+|++ |..-+|... . .........-|..+|+.|.+.+
T Consensus 275 i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l 332 (430)
T 3h28_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 468888998899999999 777766421 1 1234556667788888877654
No 16
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.99 E-value=1.6 Score=28.60 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=33.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
=.||+.+|+.+.+|+|++ |.+-+|.. ........-|..+|+.|.+.+
T Consensus 288 i~vd~~~~~~~~~~vfa~GD~~~~~~~---~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 288 IPTDLNMVSIKYDNVYAVGDANSMTVP---KLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp BCBBTTSBBSSCTTEEECGGGBTTCCS---CCHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCcccccCCCCCEEEeehhccCCCC---cHHHHHHHHHHHHHHHHHHHh
Confidence 478999999899999999 76665432 223455666777777777654
No 17
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=86.75 E-value=2 Score=28.63 Aligned_cols=50 Identities=14% Similarity=0.083 Sum_probs=35.4
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCC-----CCCh--HHHHHHHHHHHHHHHHhhh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQL-----NCNP--ISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~-----~~np--~~t~~ala~r~a~~i~~~~ 58 (60)
=.||+++|..+.+|+|++ |..-+|... ...| ......-|..+|+.|.+.+
T Consensus 286 i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l 343 (437)
T 3sx6_A 286 VLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADL 343 (437)
T ss_dssp BCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 368889999899999999 877776421 1122 4556667778888887654
No 18
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=84.00 E-value=1.2 Score=29.78 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=22.6
Q ss_pred CCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 14 QLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 14 ~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
..+...++|||.|.+|++|-. + ..-++.-|..+|+.|++++
T Consensus 451 ~~~~t~i~gLyl~G~~t~pG~-G---v~ga~~SG~~aA~~il~dL 491 (501)
T 4dgk_A 451 HNRDKTITNLYLVGAGTHPGA-G---IPGVIGSAKATAGLMLEDL 491 (501)
T ss_dssp -----CCTTEEECCCH----------HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCCCCCcc-c---HHHHHHHHHHHHHHHHHHh
Confidence 344557899999999998742 1 1122334888999988876
No 19
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=81.30 E-value=4.3 Score=25.05 Aligned_cols=43 Identities=21% Similarity=0.288 Sum_probs=29.5
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.||+++| ...+|+|++ |..-.|. ......+.-|..+|..|.+.
T Consensus 260 ~vd~~~~-t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~ 303 (310)
T 1fl2_A 260 IIDAKCE-TNVKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDY 303 (310)
T ss_dssp CCCTTCB-CSSTTEEECSTTBSCSS----CCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCc-cCCCCEEEeecccCCcc----hhhhhhHhhHHHHHHHHHHH
Confidence 6788888 578999999 6655542 23445566677777776654
No 20
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=80.15 E-value=4.5 Score=24.77 Aligned_cols=44 Identities=14% Similarity=0.021 Sum_probs=30.0
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
=.||+++|. .++|+|++ |..-.+ .......+.-|..+|..|.+.
T Consensus 266 i~vd~~~~t-~~~~v~a~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~ 310 (315)
T 3r9u_A 266 VSVDLKMQT-SVAGLFAAGDLRKDA----PKQVICAAGDGAVAALSAMAY 310 (315)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBTTC----CCCHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCccc-CCCCEEEeecccCCc----hhhhhhHHhhHHHHHHHHHHH
Confidence 368888887 89999999 554222 233455566777777777654
No 21
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=77.65 E-value=5.5 Score=24.56 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=28.9
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
.||+++|. .++|+|++ |..-+|..+ ......+.-|..+|+.|.+.+
T Consensus 268 ~vd~~~~t-~~~~vya~GD~~~~~~~~--~~~~~A~~~g~~aa~~i~~~l 314 (332)
T 3lzw_A 268 VVKSTMET-NIEGFFAAGDICTYEGKV--NLIASGFGEAPTAVNNAKAYM 314 (332)
T ss_dssp ECCTTSBC-SSTTEEECGGGEECTTCC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCce-ecCCEEEccceecCCCCc--ceEeeehhhHHHHHHHHHHhh
Confidence 67888886 89999999 665444322 123344445667777665543
No 22
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=77.15 E-value=6.7 Score=24.17 Aligned_cols=45 Identities=20% Similarity=0.208 Sum_probs=29.5
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
=+||+++|. .++|+|++ |..-.| .......+.-|..+|..|.+.+
T Consensus 263 i~vd~~~~t-~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 263 IVVDFSMKT-NVQGLFAAGDIRIFA----PKQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBTTC----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCcccc-CCCCeEEcccccCcc----hHHHHHHHHhHHHHHHHHHHHH
Confidence 367888886 78999999 555442 1123445566777777776543
No 23
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=75.65 E-value=7 Score=24.78 Aligned_cols=45 Identities=24% Similarity=0.355 Sum_probs=28.7
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.||+++|. .++|+|++ |..-+|..+ ......+.-|..+|+.|.+.
T Consensus 281 ~vd~~~~t-~~~~vya~GD~~~~~~~~--~~~~~A~~~g~~aa~~i~~~ 326 (360)
T 3ab1_A 281 VVDSHMKT-SVDGLYAAGDIAYYPGKL--KIIQTGLSEATMAVRHSLSY 326 (360)
T ss_dssp ECCTTSBC-SSTTEEECSTTEECTTCC--CSHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCcC-CCCCEEEecCccCCCCcc--ceeehhHHHHHHHHHHHHhh
Confidence 67888886 89999999 666555321 12333445566777766544
No 24
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=75.18 E-value=8.1 Score=22.05 Aligned_cols=42 Identities=12% Similarity=-0.106 Sum_probs=27.9
Q ss_pred ecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 11 VDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 11 vd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
||+++|. ..+|+|++ |..-.|. + .......-|..+|..|...
T Consensus 127 vd~~~~t-~~~~i~a~GD~~~~~~-~---~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 127 TDEGGRT-SYPRVYAAGVARGKVP-G---HAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp CCTTCBC-SSTTEEECGGGGTCCS-C---CHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCc-CCCCEEEeecccCcch-h---hHHHHHHhHHHHHHHHHHH
Confidence 7888888 88999999 6655542 1 2334455666677766543
No 25
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=74.60 E-value=8.7 Score=23.90 Aligned_cols=44 Identities=16% Similarity=0.217 Sum_probs=28.7
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
=.||++++. ..+|+|++ |..-.| .........-|..+|+.|.+.
T Consensus 266 i~vd~~~~t-~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 266 VDVRDEIYT-NIPMLFAAGDVSDYI----YRQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp BCCBTTTBC-SSTTEEECSTTTCSS----CCCHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCcc-CCCCEEEeecccCcc----HHHHHHHHHHHHHHHHHHHHH
Confidence 367888885 78999999 655443 123445556666777766544
No 26
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=73.03 E-value=8.8 Score=23.86 Aligned_cols=45 Identities=20% Similarity=0.212 Sum_probs=28.6
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.||+++|. .++|+|++ |..-+|..+ ......+.-|..+|+.|.+.
T Consensus 270 ~vd~~~~t-~~~~vya~GD~~~~~~~~--~~~~~A~~~g~~aa~~i~~~ 315 (335)
T 2zbw_A 270 KVDTTMAT-SIPGVYACGDIVTYPGKL--PLIVLGFGEAAIAANHAAAY 315 (335)
T ss_dssp ECCTTCBC-SSTTEEECSTTEECTTCC--CCHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCCC-CCCCEEEeccccccCcch--hhhhhhHHHHHHHHHHHHHH
Confidence 67888884 78999999 666555422 12333444566777766554
No 27
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=72.26 E-value=8.9 Score=23.82 Aligned_cols=44 Identities=16% Similarity=-0.090 Sum_probs=27.1
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
+||++.+....+|+|++ |..-.| .......+.-|..+|..|.+.
T Consensus 277 ~vd~~~~~t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~ 321 (333)
T 1vdc_A 277 VTKPGTTQTSVPGVFAAGDVQDKK----YRQAITAAGTGCMAALDAEHY 321 (333)
T ss_dssp CCCTTSCBCSSTTEEECGGGGCSS----CCCHHHHHHHHHHHHHHHHHH
T ss_pred EechhhcccCCCCEEEeeeccCCC----chhHHHHHHhHHHHHHHHHHH
Confidence 45665444578999999 655444 123445555667777766554
No 28
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=70.99 E-value=11 Score=24.28 Aligned_cols=47 Identities=19% Similarity=0.065 Sum_probs=31.3
Q ss_pred ceecCC-CceeccCCeEEe-cCC-CcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 9 AVVDDQ-LLVHGVENVRVA-DAS-VFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 9 ~Vvd~~-~~v~g~~nL~V~-D~S-i~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
=.||++ +|..+++|+|.+ |.. ..|.+. .......-|..+|+.|.+.+
T Consensus 274 i~VD~~tl~~t~~p~VfAiGDva~~~~~pk---~a~~A~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 274 CPVDIRTFESSLQPGIHVIGDACNAAPMPK---SAYSANSQAKVAAAAVVALL 323 (401)
T ss_dssp BCBCTTTCBBSSSTTEEECGGGBCCTTSCB---SHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCcceecCCCCEEEecccccCCCCCc---hHHHHHHHHHHHHHHHHHHh
Confidence 368887 889999999999 643 344322 23445566777777776543
No 29
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=67.96 E-value=15 Score=22.66 Aligned_cols=44 Identities=23% Similarity=0.167 Sum_probs=29.1
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
+||++++ ...+|+|++ |..-.|. ......+.-|..+|..|.+.+
T Consensus 271 ~vd~~~~-t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l 315 (319)
T 3cty_A 271 VVDSRQR-TSVPGVYAAGDVTSGNF----AQIASAVGDGCKAALSLYSDS 315 (319)
T ss_dssp CCCTTCB-CSSTTEEECSTTBTTCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCc-cCCCCEEEeecccCcch----hhHHHHHHHHHHHHHHHHHHh
Confidence 6788777 478999999 5544321 224455667777787776654
No 30
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=67.26 E-value=14 Score=22.33 Aligned_cols=43 Identities=7% Similarity=0.033 Sum_probs=28.3
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
.||++++ ...+|+|++ |..-.| ......+.-|..+|..|.+.+
T Consensus 248 ~vd~~~~-t~~~~vya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~~l 291 (297)
T 3fbs_A 248 VTDPMKQ-TTARGIFACGDVARPA-----GSVALAVGDGAMAGAAAHRSI 291 (297)
T ss_dssp CCCTTCB-CSSTTEEECSGGGCTT-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCc-cCCCCEEEEeecCCch-----HHHHHHHHhHHHHHHHHHHHH
Confidence 5777777 488999999 655443 234555666777777776543
No 31
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=66.89 E-value=10 Score=25.76 Aligned_cols=46 Identities=7% Similarity=-0.054 Sum_probs=31.7
Q ss_pred ceecCCCceeccCCeEEec---CCCc-CCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVAD---ASVF-PTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~D---~Si~-P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
-|+|.+++ =++|||.+. ++++ ..-+++|.....+..|.++++.+.+
T Consensus 459 ~Vl~~~g~--~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 459 EVLHVSGE--PIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp EEEBTTSS--EEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred ceECCCCC--CcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 34444444 378999995 3566 3345677888888899999888764
No 32
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=64.62 E-value=6.5 Score=27.79 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=32.3
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
.+|.+++.-.++|||.| ||+=+ ..-.....+-|.++|+.|.+.+
T Consensus 498 ~~~~~~~~~~~~gly~~GegaG~-----a~gi~~Aa~~G~~~a~~i~~~~ 542 (549)
T 3nlc_A 498 KRGKDFQSVNLKGFYPAGEGAGY-----AGGILSAGIDGIKVAEAVARDI 542 (549)
T ss_dssp CCTTTTSCTTCBTEEECHHHHTS-----CCSHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCceECCcCCEEEccccCCh-----hhHHHHHHHHHHHHHHHHHHHh
Confidence 46888887799999999 66522 2335667788888888887654
No 33
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=62.76 E-value=19 Score=22.48 Aligned_cols=44 Identities=11% Similarity=-0.093 Sum_probs=26.0
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
+||++.+....+|+|++ |..-.|. ......+.-|..+|..|.+.
T Consensus 270 ~vd~~~~~t~~~~iya~GD~~~~~~----~~~~~A~~~g~~aA~~i~~~ 314 (335)
T 2a87_A 270 LVQGRTTSTSLPGVFAAGDLVDRTY----RQAVTAAGSGCAAAIDAERW 314 (335)
T ss_dssp CCSTTSSBCSSTTEEECGGGTCCSC----CCHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCccCCCCEEEeeecCCccH----HHHHHHHHhHHHHHHHHHHH
Confidence 45665555678999999 5554331 22344455566666666543
No 34
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=62.62 E-value=18 Score=24.57 Aligned_cols=43 Identities=16% Similarity=0.154 Sum_probs=29.7
Q ss_pred eecCCCceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 10 VVDDQLLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
+||.+++ ..+|+|++.-..-+ ......+.-|..+|+.|...+|
T Consensus 335 ~vd~~~~--s~~~vya~GD~~~~-----~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 335 VLDEYHR--IKDGIYVAGSAVSI-----KPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp CCCTTSE--EETTEEECSTTTCC-----CCHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccC--cCCCEEEEeccCCc-----cCHHHHHHHHHHHHHHHHHHcC
Confidence 3788888 89999999433321 2355667777888888776554
No 35
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=62.55 E-value=20 Score=22.01 Aligned_cols=45 Identities=13% Similarity=-0.110 Sum_probs=28.3
Q ss_pred eecCCC----ceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQL----LVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~----~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
+||+++ +.-..+|+|++ |..-.|. ........-|..+|..|.+.+
T Consensus 264 ~vd~~~~~~~~~t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l 313 (320)
T 1trb_A 264 KVQSGIHGNATQTSIPGVFAAGDVMDHIY----RQAITSAGTGCMAALDAERYL 313 (320)
T ss_dssp CCCCSSSSCTTBCSSTTEEECGGGGCSSS----CCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcccccccCCCCCEEEcccccCCcc----hhhhhhhccHHHHHHHHHHHH
Confidence 456664 34578999999 6554441 224556666777777776554
No 36
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=60.61 E-value=14 Score=25.16 Aligned_cols=46 Identities=9% Similarity=-0.011 Sum_probs=32.5
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCCh-----HHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNP-----ISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np-----~~t~~ala~r~a~~i~ 55 (60)
=.||.++|. ..+|+|.+ |..-+|......+ ......-|..+|+.|.
T Consensus 285 i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 285 IKVNAMMQT-SDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred EEECCCccc-CCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 368888987 88999999 7777776554443 3345566777777765
No 37
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=60.14 E-value=21 Score=24.41 Aligned_cols=43 Identities=21% Similarity=0.300 Sum_probs=28.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
=+||+++|. .++|+|++ |..-.|. ......+.-|..+|..|.+
T Consensus 470 I~Vd~~~~t-s~p~VfA~GD~~~~~~----~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 470 IIIDAKCET-SVKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBCCSS----CCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCC-CCCCEEEeecccCCCc----ceeeehHHhHHHHHHHHHH
Confidence 367888886 88999999 6665552 2344555556666666544
No 38
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=59.24 E-value=15 Score=25.34 Aligned_cols=48 Identities=19% Similarity=0.164 Sum_probs=33.8
Q ss_pred eecCCCcee-----ccCCeEEec---CCCcC-CCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVH-----GVENVRVAD---ASVFP-TQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~-----g~~nL~V~D---~Si~P-~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.+|.++||. -++|||.+. ++++- .-+++|..+..+..|.++++.+.+.
T Consensus 511 ~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 511 MIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp EBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 467777763 489999995 34443 2346777888888899888887653
No 39
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=58.70 E-value=7.6 Score=26.34 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=28.3
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
++|.++|+.+++|+|++ |..--|... ..+.+.-|..+|+.|..+
T Consensus 341 ~vn~~~rvt~~pgvya~GD~~~gp~~~----i~~a~~~g~~~a~~i~~~ 385 (456)
T 1lqt_A 341 IPNVGGRINGSPNEYVVGWIKRGPTGV----IGTNKKDAQDTVDTLIKN 385 (456)
T ss_dssp CCEETTEETTCSSEEECTHHHHCSCSC----TTHHHHHHHHHHHHHHHH
T ss_pred eECCCCcCCCCCCEEEEeccCCCCchh----HHHHHHHHHHHHHHHHHH
Confidence 67889998899999999 554334321 124455566666665543
No 40
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=58.42 E-value=17 Score=25.94 Aligned_cols=48 Identities=17% Similarity=0.204 Sum_probs=35.7
Q ss_pred eecCCCcee--------ccCCeEEecC----CCcCC-CCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVH--------GVENVRVADA----SVFPT-QLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~--------g~~nL~V~D~----Si~P~-~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.+|.++||. -++|||.+.- |++-. -+++|..+-.+..|.++++.+.+.
T Consensus 371 ~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~ 431 (621)
T 2h88_A 371 PTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAET 431 (621)
T ss_dssp EBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred eECCCCeEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHh
Confidence 588889885 4899999953 44432 247788888889999988887653
No 41
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=58.07 E-value=23 Score=22.17 Aligned_cols=48 Identities=8% Similarity=-0.029 Sum_probs=28.6
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
+||.+.+....+|+|++ |..-.|..... .......-|..+|+.|..+.
T Consensus 290 ~v~~~~~~t~~~~v~a~GD~~~~~~~~~~-~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 290 KLTTHDESTRYPNIFMIGATVENDNAKLC-YIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp CBCTTSBBSSSTTEEECSTTCCCSSCCCC-SHHHHGGGHHHHHHHHHHHT
T ss_pred EechhhcccCCCCeEEeccccccCCeeEE-EEehhhHHHHHHHHHHhccc
Confidence 67877777789999999 65555554432 12222333555666665443
No 42
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=57.11 E-value=16 Score=26.30 Aligned_cols=46 Identities=11% Similarity=0.088 Sum_probs=33.3
Q ss_pred eecCCCceeccCCeEEecC----CCcCC-CCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVADA----SVFPT-QLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~D~----Si~P~-~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.+|.++|| -++|||.+.- ++.-. ..++|..+..+..|.++++.+.+
T Consensus 376 ~vd~~~~v-~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~ 426 (660)
T 2bs2_A 376 RTDYRGEA-KLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAE 426 (660)
T ss_dssp ECCTTSBC-SSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCce-ecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 58999999 8999999954 33332 23567777777888887777643
No 43
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=56.66 E-value=29 Score=21.33 Aligned_cols=46 Identities=17% Similarity=0.005 Sum_probs=29.3
Q ss_pred eecCC-CceeccCCeEEec--CCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQ-LLVHGVENVRVAD--ASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~-~~v~g~~nL~V~D--~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
.||++ ++....+|+|++. -..-|. .........-|..+|+.|.+.+
T Consensus 303 ~vd~~~l~~t~~~~vya~Gd~d~~~~~---~~~~~~A~~~g~~~a~~i~~~l 351 (357)
T 4a9w_A 303 EVDGSGLRALAVPSVWLLGYGDWNGMA---SATLIGVTRYAREAVRQVTAYC 351 (357)
T ss_dssp CBCTTSCBBSSCTTEEECSSCGGGSTT---CSSTTTHHHHHHHHHHHHHHHT
T ss_pred cccCCcccCCCCCCeEEeccccccccc---hhhhhhhHHHHHHHHHHHHHHH
Confidence 56776 5677999999995 222221 1223336777888888877654
No 44
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=55.58 E-value=23 Score=24.39 Aligned_cols=48 Identities=13% Similarity=0.167 Sum_probs=33.2
Q ss_pred eecCCCcee-----ccCCeEEec---CCCcC-CCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVH-----GVENVRVAD---ASVFP-TQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~-----g~~nL~V~D---~Si~P-~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.+|.++||. -++|||.+. ++++- .-+++|..+..+..|.++++.+.+.
T Consensus 506 ~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~ 562 (566)
T 1qo8_A 506 AINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKH 562 (566)
T ss_dssp CBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 467777764 589999995 34442 2346677778888888888877653
No 45
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=55.11 E-value=14 Score=24.86 Aligned_cols=46 Identities=13% Similarity=0.065 Sum_probs=31.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCC-----hHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCN-----PISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n-----p~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..-.|..+... -......-|..+|+.|.
T Consensus 308 I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 308 FLVNKRQET-SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred EEECCCccc-CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 378999998 89999999 766665444332 23445566677777664
No 46
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=55.06 E-value=8.9 Score=26.03 Aligned_cols=45 Identities=18% Similarity=0.078 Sum_probs=30.0
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
++|.++|+-+++|+|++ |..-.|. .-..+.+.-|..+|+.|...+
T Consensus 349 ~vn~~~rt~~~p~vya~Gd~~~g~~----~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 349 VPNMEGRVVDVPGLYCSGWVKRGPT----GVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp CCEETTEETTCTTEEECTHHHHCTT----CCHHHHHHHHHHHHHHHHHHH
T ss_pred eECCCCcCcCCCCEEEEEeCCcCCC----ccHHHHHHHHHHHHHHHHHHH
Confidence 67889999889999999 5443332 113356667777777766543
No 47
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=52.60 E-value=22 Score=23.85 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=30.8
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCCh-----HHHHHHHHHHHHHHHH
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNP-----ISVVIMTAEKCAQMVL 55 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np-----~~t~~ala~r~a~~i~ 55 (60)
+||+++|. ..+|+|.+ |..-++......| ......-|..+|+.|.
T Consensus 301 ~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 301 EVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351 (480)
T ss_dssp CCCTTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred EECCCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhc
Confidence 78888887 58999999 7766665443332 4455666677777664
No 48
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=51.08 E-value=12 Score=24.76 Aligned_cols=46 Identities=7% Similarity=0.052 Sum_probs=29.8
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCC-----hHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCN-----PISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n-----p~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..-.|..+... -......-|..+|+.|.
T Consensus 264 i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 264 IITDEYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp BCCCTTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred EEECCCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 378999998 89999999 766655443332 13444555666666553
No 49
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=50.62 E-value=13 Score=24.83 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=31.5
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCCh-----HHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNP-----ISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np-----~~t~~ala~r~a~~i~ 55 (60)
=.||+++|. ..+|+|.+ |..-+|......| ......-|..+|+.|.
T Consensus 276 i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 276 IIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp EECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred EEECCCccc-CCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 368988997 78999999 7777776554433 2234555666776664
No 50
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=50.52 E-value=22 Score=23.73 Aligned_cols=45 Identities=18% Similarity=0.075 Sum_probs=30.9
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCCh-----HHHHHHHHHHHHHHHH
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNP-----ISVVIMTAEKCAQMVL 55 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np-----~~t~~ala~r~a~~i~ 55 (60)
+||.++|. .++|+|.+ |..-+|......| .-....-|..+|+.|.
T Consensus 259 ~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 259 PVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp ECCTTCBC-SSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred ecCCCccC-CCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 58999997 89999999 8877776554332 2233445666777665
No 51
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=49.11 E-value=31 Score=22.79 Aligned_cols=46 Identities=13% Similarity=0.053 Sum_probs=30.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCC---h--HHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCN---P--ISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n---p--~~t~~ala~r~a~~i~ 55 (60)
=.||+++|. ..+|+|.+ |..-++...... | ......-|..+|+.|.
T Consensus 262 i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 262 IWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred EEECCCCcc-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc
Confidence 478988997 89999999 776666554332 2 2334455666666664
No 52
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=48.69 E-value=19 Score=25.26 Aligned_cols=47 Identities=11% Similarity=0.024 Sum_probs=33.3
Q ss_pred eecCCCcee---------ccCCeEEecC----CCcC-CCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVH---------GVENVRVADA----SVFP-TQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~---------g~~nL~V~D~----Si~P-~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.+|.++||. -++|||.+.- +++- .-+++|..+..+..|.++++.+.+
T Consensus 361 ~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~ 421 (588)
T 2wdq_A 361 PTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQE 421 (588)
T ss_dssp EBCTTCEEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHH
T ss_pred EECCCCCCcccccccCCCeeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 588889884 5899999953 4442 234667777788888888776643
No 53
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=48.10 E-value=28 Score=24.16 Aligned_cols=48 Identities=19% Similarity=0.207 Sum_probs=33.9
Q ss_pred eecCCCcee------ccCCeEEec---CCCcC-CCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVH------GVENVRVAD---ASVFP-TQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~------g~~nL~V~D---~Si~P-~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.+|.++||. -++|||.+. ++++- .-+++|..+..+..|.++++.+.+.
T Consensus 511 ~id~~~~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 511 VIDTKAEVKSEKTAKPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp EBCTTCEEEBSSSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred EECCCCeEEcCCCCcccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 467777764 478899985 34442 2346778888888999998887653
No 54
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=46.72 E-value=29 Score=24.45 Aligned_cols=46 Identities=7% Similarity=0.163 Sum_probs=32.4
Q ss_pred eecCCCceeccCCeEEecC----CCcC-CCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVADA----SVFP-TQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~D~----Si~P-~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.+|.++|+ -++|||.+.- ++.- .-.+.|-.+-.+..|.++++.+.+
T Consensus 363 ~vd~~~~~-~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~ 413 (602)
T 1kf6_A 363 ETDQNCET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATE 413 (602)
T ss_dssp ECCTTSBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcc-ccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 58999999 8999999943 3332 223566677777778777776643
No 55
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=45.81 E-value=25 Score=22.61 Aligned_cols=38 Identities=11% Similarity=-0.019 Sum_probs=24.0
Q ss_pred ceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 16 LVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 16 ~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
+...++|||+|..+..|. +.-..--+.+=|.++++.|.
T Consensus 387 ~~~p~~gL~laG~~~~~~--gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 387 NETPFSGLYVVGDGAKGK--GGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp SBCSSBTEEECSTTSCCT--TCCHHHHHHHHHHHHHHC--
T ss_pred CCCCcCCeEEeCCccCCC--CCCccHHHHHHHHHHHHHhh
Confidence 344578999999999975 33344445555666666553
No 56
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=45.00 E-value=19 Score=23.49 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=33.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCC-----hHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCN-----PISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n-----p~~t~~ala~r~a~~i~~ 56 (60)
=+||.++|. ..+|+|.+ |..-+|...... .......-|..+|+.|..
T Consensus 257 i~vd~~~~t-~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 257 IIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp EEECTTSBC-SSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred EEECCCccc-CCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 478998986 78999999 777776644332 245666777777777653
No 57
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=43.98 E-value=53 Score=20.01 Aligned_cols=43 Identities=14% Similarity=-0.100 Sum_probs=27.6
Q ss_pred ecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 11 VDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 11 vd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
+|..++ ...+|+|++ |..-.+ .......+.-|..+|..|.+.+
T Consensus 291 ~~~~~~-t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l 334 (338)
T 3itj_A 291 VPGSSL-TSVPGFFAAGDVQDSK----YRQAITSAGSGCMAALDAEKYL 334 (338)
T ss_dssp CTTSSB-CSSTTEEECGGGGCSS----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccc-cCCCCEEEeeccCCCC----ccceeeehhhhHHHHHHHHHHH
Confidence 355555 488999999 544322 2334566777888888776654
No 58
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=42.76 E-value=40 Score=23.30 Aligned_cols=47 Identities=15% Similarity=0.206 Sum_probs=33.5
Q ss_pred eecCCCceeccCCeEEecCC----Cc-CCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVADAS----VF-PTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~D~S----i~-P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.+|.++| .-++|||.+.-. +. ....+.|..+..+..|.++++.+.+.
T Consensus 358 ~vd~~~~-t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 358 MVDDHGR-TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp ECCTTCB-CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHh
Confidence 5888888 479999999532 22 23345677777888888888887643
No 59
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=42.39 E-value=25 Score=23.06 Aligned_cols=47 Identities=17% Similarity=0.051 Sum_probs=32.3
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCC-----hHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCN-----PISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n-----p~~t~~ala~r~a~~i~~ 56 (60)
=+||+++|. ..+|+|.+ |..-.|...... .......-|..+|+.|..
T Consensus 255 i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 255 IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp EECCTTCBC-SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCcc-CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 468999987 88999999 776666432221 234566777888887763
No 60
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=41.84 E-value=14 Score=24.53 Aligned_cols=45 Identities=9% Similarity=-0.009 Sum_probs=28.2
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCC-----hHHHHHHHHHHHHHHHH
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCN-----PISVVIMTAEKCAQMVL 55 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n-----p~~t~~ala~r~a~~i~ 55 (60)
+||+++|. ..+|+|++ |..-++...... -......-|..+|+.|.
T Consensus 264 ~Vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 264 KTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp CCCTTCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred EECccccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 68999887 78999999 666555433222 13344555666666553
No 61
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=40.37 E-value=62 Score=19.79 Aligned_cols=42 Identities=19% Similarity=0.128 Sum_probs=25.2
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
+||+++|. .++|+|.+ |..--| ..-..+.+.-|..+|+.|.+
T Consensus 261 ~vd~~~~T-s~pgIyA~GDv~~~~----~~~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 261 VTKDDMTT-SVPGIFAAGDVRDKG----LRQIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp CCCTTSBC-SSTTEEECSTTBSCS----CCSHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCcc-CCCCEEEEeecCCCc----chHHHHHHHHHHHHHHHHHH
Confidence 68888886 78999999 643211 11123444556666666543
No 62
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=39.78 E-value=36 Score=22.24 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=33.0
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCC----ChHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNC----NPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~----np~~t~~ala~r~a~~i~~ 56 (60)
=+||.++|. ..+|+|.+ |..-+|...+. ........-|..+|+.|..
T Consensus 257 i~vd~~~~t-~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 257 VIVDHCGAT-LAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp EECCTTSBC-SSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EEEccCeeE-CCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcC
Confidence 478888887 88999999 77777764311 1245667777788877753
No 63
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=38.56 E-value=41 Score=19.46 Aligned_cols=43 Identities=19% Similarity=0.260 Sum_probs=30.5
Q ss_pred ceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 16 LVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 16 ~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
++.|+.=+++- ||-|-=.-.-.||.-.+.+++++.+.++.++.
T Consensus 104 ~v~Gvdvl~~d~dGkI~~~~~~~~P~~~~~~l~~~m~~~l~~~~ 147 (148)
T 3f8x_A 104 LLTGVDLIEFNDAGKITDLVVMMRPASVVIDLSVEVGKRIAAAQ 147 (148)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEECCCCcEEEEEEEEchHHHHHHHHHHHHHHHHhhc
Confidence 45556656663 45444444456999999999999999987764
No 64
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=38.34 E-value=4.5 Score=25.69 Aligned_cols=48 Identities=19% Similarity=0.101 Sum_probs=28.5
Q ss_pred eecCCCceeccCCeEEe-cCC--CcCCCCCCChHHHH-HHHHHHHHHHHHhhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DAS--VFPTQLNCNPISVV-IMTAEKCAQMVLDKN 58 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~S--i~P~~~~~np~~t~-~ala~r~a~~i~~~~ 58 (60)
++...+....++|||++ |+. +.+ .++..|+.-- +.-+.++|+.|.+.+
T Consensus 273 iv~~~~~~t~vpGv~aaGDaa~~v~g-~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 273 VVIHSGAYAGVDNMYFAGMEVAELDG-LNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp HHHHCEECTTSBTEEECTHHHHHHHT-CCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCeEECCCCEEEEchHhccccC-CCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 44445556678999998 432 122 2233443322 334899999998765
No 65
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=38.26 E-value=14 Score=25.14 Aligned_cols=45 Identities=18% Similarity=0.143 Sum_probs=29.4
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCC----hHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCN----PISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n----p~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. .+|+|.+ |..-+|...... .......-|..+|+.|.
T Consensus 301 i~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 301 FRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp EECCTTCEE--ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred EEECCCccc--CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhc
Confidence 378999997 5999999 777666443221 12245566677776664
No 66
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=38.13 E-value=49 Score=22.69 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=30.8
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCC----h-HHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCN----P-ISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n----p-~~t~~ala~r~a~~i~~ 56 (60)
.||.++|. .++|+|.+ |..-+|...... + ......-|..+|+.|..
T Consensus 301 ~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 301 KVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EECCcccc-CCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 68888887 78999999 777666554333 2 23345556677776653
No 67
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=37.31 E-value=69 Score=21.27 Aligned_cols=42 Identities=19% Similarity=0.239 Sum_probs=28.4
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
=.||.++|. .++|+|++ |..-.| .-......-|..+|+.|..
T Consensus 290 i~vd~~~~t-~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 290 IVVDETMKT-NIPNVFATGDANGLA-----PYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp BCCCTTCBC-SSTTEEECGGGTCSC-----CSHHHHHHHHHHHHHHHHT
T ss_pred EeECCCccC-CCCCEEEEEecCCCC-----ccHhHHHHHHHHHHHHHhC
Confidence 467888998 89999999 554332 1234455667777777763
No 68
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=36.88 E-value=59 Score=19.40 Aligned_cols=35 Identities=11% Similarity=0.070 Sum_probs=26.1
Q ss_pred ccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 19 GVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 19 g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
.++|||++.-... .+....++.-|.++|+.|.+++
T Consensus 197 ~~p~iya~G~~a~-----~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 197 RLEGLYAVGLCVR-----EGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TSBSEEECGGGTS-----CCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccccceeeeeccc-----CccHHHHHHHHHHHHHHHHhhc
Confidence 7899999944442 2255566889999999998775
No 69
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=36.07 E-value=69 Score=21.26 Aligned_cols=41 Identities=20% Similarity=0.206 Sum_probs=26.3
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.||+++|. .++|+|.+ |..-.| ........-|..+|+.|..
T Consensus 314 ~vd~~~~t-~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 314 IVDEFQNT-NVKGIYAVGDVCGKA-----LLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp CCCTTCBC-SSTTEEECGGGGCSS-----CCHHHHHHHHHHHHHHHHS
T ss_pred eeCCCccc-CCCCEEEEEecCCCC-----ccHhHHHHHHHHHHHHHcC
Confidence 68888886 89999999 544122 1233345556677777653
No 70
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=35.82 E-value=67 Score=20.81 Aligned_cols=38 Identities=8% Similarity=0.193 Sum_probs=26.2
Q ss_pred cCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 20 VENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 20 ~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
+.|||.+..+..+.-++ ..--.+.-|.|+|+.|.+.++
T Consensus 415 ~~~l~~aG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGYQ--HVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp BTTEEECCGGGCSTTTT--SHHHHHHHHHHHHHHHHHHC-
T ss_pred cCceEEeeccccccccc--chHHHHHHHHHHHHHHHHHhc
Confidence 57999998877544333 234456678999999987654
No 71
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=34.42 E-value=39 Score=22.01 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=32.3
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCC-C-----ChHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLN-C-----NPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~-~-----np~~t~~ala~r~a~~i~~ 56 (60)
=+||.++|. ..+|+|.+ |..-+|.... . ........-|..+|+.|..
T Consensus 267 i~vd~~~~t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 267 VDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp EECCTTCBC-SSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCc-CCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcC
Confidence 468888987 79999999 7776665322 1 1245566777777777753
No 72
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=33.53 E-value=70 Score=21.73 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=27.5
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..-.| ........-|..+|+.|.
T Consensus 335 i~Vd~~~~t-~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 376 (523)
T 1mo9_A 335 VLVNEYLQT-SVPNVYAVGDLIGGP-----MEMFKARKSGCYAARNVM 376 (523)
T ss_dssp BCCCTTSBC-SSTTEEECGGGGCSS-----CSHHHHHHHHHHHHHHHT
T ss_pred EEECCCCcc-CCCCEEEEeecCCCc-----ccHHHHHHHHHHHHHHHc
Confidence 368999997 89999999 655333 123345566666776664
No 73
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=32.57 E-value=95 Score=20.95 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=28.2
Q ss_pred eecCC-CceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQ-LLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~-~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
.||++ ++ -..+|+|++ |..-.| ......+.-|.++|+.|.+.
T Consensus 399 ~vd~~~~~-Ts~~~VfA~GD~~~g~-----~~v~~A~~~G~~aA~~i~~~ 442 (456)
T 2vdc_G 399 LVDHRTKM-TNMDGVFAAGDIVRGA-----SLVVWAIRDGRDAAEGIHAY 442 (456)
T ss_dssp CCCTTTCB-CSSTTEEECGGGGSSC-----CSHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCc-CCCCCEEEeccccCCc-----hHHHHHHHHHHHHHHHHHHH
Confidence 56666 66 478999999 654433 23556677777888777654
No 74
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=31.25 E-value=35 Score=19.35 Aligned_cols=43 Identities=14% Similarity=0.249 Sum_probs=29.2
Q ss_pred ceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 16 LVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 16 ~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
++.|+.=+++- ||=|-=.-.-.||.-.+.+++++...++.++.
T Consensus 95 ~v~Gv~v~~~~~dGkI~~~~~~~~P~~~~~~~~~~~~~~~~~~~ 138 (143)
T 3mso_A 95 ELKGIDMIRFDDDGRIVDFEVMVRPMSGLQALGEEMGRRLASYL 138 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEESHHHHHHHHHHHHHHTTC--
T ss_pred EEEEEEEEEECCCCcEEEEEEEECcHHHHHHHHHHHHHHHHHhh
Confidence 55666666664 45444444456999999999999998886554
No 75
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=30.52 E-value=86 Score=20.19 Aligned_cols=45 Identities=13% Similarity=0.252 Sum_probs=28.3
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=.||+++|. ..+|+|.+ |..-++..+. ........-|..+|+.|.
T Consensus 250 i~Vd~~~~t-~~~~IyA~GD~a~~~~~~~-~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 250 ILIDDNFRT-SAKDVYAIGDCAEYSGIIA-GTAKAAMEQARVLADILK 295 (367)
T ss_dssp EECCTTSBC-SSTTEEECGGGEEBTTBCC-CSHHHHHHHHHHHHHHHT
T ss_pred EEECCCccc-CCCCEEEeEeeeecCCCCc-cHHHHHHHHHHHHHHHhc
Confidence 368888997 78999999 6554432111 123345566677777664
No 76
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=30.45 E-value=91 Score=21.54 Aligned_cols=39 Identities=10% Similarity=-0.112 Sum_probs=28.2
Q ss_pred CceeccCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 15 LLVHGVENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 15 ~~v~g~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
..+.|.+|+|.+-|-.-| ..|-...+-..++++++.|.+
T Consensus 416 ~~v~gfPN~f~~~Gp~~~---~~s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 416 VSTANFPNWFMVLGPNGP---FTNLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp TBCTTCTTEEESSCSSCB---CSCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCceEEEecCCCC---CccHHHHHHHHHHHHHHHHHH
Confidence 578899999999663333 556667777777888877753
No 77
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=30.43 E-value=78 Score=20.95 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=34.4
Q ss_pred ccCCeEEecCCCcCCCC------CCChHHHHHHHHHHHHHHHHhhhCC
Q psy15532 19 GVENVRVADASVFPTQL------NCNPISVVIMTAEKCAQMVLDKNKV 60 (60)
Q Consensus 19 g~~nL~V~D~Si~P~~~------~~np~~t~~ala~r~a~~i~~~~~~ 60 (60)
|.+|.++-++.+-+.-. +.-+..-+.+|++++-+.+.+++|+
T Consensus 271 GlKG~~~G~a~vs~kha~flvN~g~Ata~dv~~L~~~v~~~V~~~fgv 318 (340)
T 1uxy_A 271 QLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNV 318 (340)
T ss_dssp TCTTCEETTEEECSSCTTEEEECSSCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCeeCCEEEccccCCeEEECCCCCHHHHHHHHHHHHHHHHHHHCC
Confidence 67888888888777654 3457888999999999999999875
No 78
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=29.91 E-value=77 Score=21.25 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=34.9
Q ss_pred ccCCeEEecCCCcCCCC------CCChHHHHHHHHHHHHHHHHhhhCC
Q psy15532 19 GVENVRVADASVFPTQL------NCNPISVVIMTAEKCAQMVLDKNKV 60 (60)
Q Consensus 19 g~~nL~V~D~Si~P~~~------~~np~~t~~ala~r~a~~i~~~~~~ 60 (60)
|.+|.++-++.+-+.-. +.-+..-+.+|++++-+.+.+++|+
T Consensus 285 GlKG~~~G~A~vs~kha~flvN~g~Ata~Di~~L~~~v~~~V~~~fgv 332 (357)
T 3i99_A 285 GLKGHQIGGAKVHPKQALVIVNTGDASAQDVLMLAADIQQRVFNCYGI 332 (357)
T ss_dssp TCTTCEETTEEECTTSTTEEEECSSCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCeeCCEEEcccCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCc
Confidence 78888888888877655 3357889999999999999999875
No 79
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=29.80 E-value=22 Score=24.02 Aligned_cols=45 Identities=11% Similarity=-0.027 Sum_probs=28.0
Q ss_pred eecCCCceeccCCeEEecCCCcCC-----CCCCChHHHHHHHHHHHHHHHH
Q psy15532 10 VVDDQLLVHGVENVRVADASVFPT-----QLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~D~Si~P~-----~~~~np~~t~~ala~r~a~~i~ 55 (60)
.||.++|+ .++|||.+.--.... ....|-.......|.++++.+.
T Consensus 320 ~vd~~~~t-~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a 369 (472)
T 2e5v_A 320 RVNIRGES-NIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVD 369 (472)
T ss_dssp ECCTTCBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTT
T ss_pred EECCCCcc-ccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHH
Confidence 68999998 799999994332211 2233444555556666666553
No 80
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=29.31 E-value=1e+02 Score=20.51 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=26.5
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=.||.++|. .++|+|.+ |..-.| .-......-|..+|+.|.
T Consensus 320 i~vd~~~~t-~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 361 (491)
T 3urh_A 320 VEIDRHFQT-SIAGVYAIGDVVRGP-----MLAHKAEDEGVAVAEIIA 361 (491)
T ss_dssp BCCCTTCBC-SSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHT
T ss_pred EeECCCCCC-CCCCEEEEEecCCCc-----cchhHHHHHHHHHHHHHc
Confidence 368888987 89999999 554232 223344455666666664
No 81
>7cei_B Protein (colicin E7 immunity protein); DNAse, E-group colicins, protein-protein interaction, protei recognition, immune system; 2.30A {Escherichia coli str} SCOP: d.4.1.1
Probab=29.18 E-value=23 Score=22.68 Aligned_cols=17 Identities=18% Similarity=0.206 Sum_probs=14.1
Q ss_pred eecCCCceeccCCeEEe
Q psy15532 10 VVDDQLLVHGVENVRVA 26 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~ 26 (60)
.+...|.||.++||+|+
T Consensus 178 ~I~~GG~VYDiDNLrI~ 194 (206)
T 7cei_B 178 PISQNGGVYDMDNISVV 194 (206)
T ss_dssp CSSSSCCSSBTTSEEEE
T ss_pred ccccCCeeecccceeec
Confidence 35667899999999997
No 82
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=28.88 E-value=1e+02 Score=20.75 Aligned_cols=41 Identities=20% Similarity=0.101 Sum_probs=27.4
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
+||+++|. ..+|+|.+ |..-.| .-......-|..+|+.|..
T Consensus 313 ~Vd~~~~t-~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 313 QVDEFSRT-NVPNIYAIGDITDRL-----MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CCCTTCBC-SSTTEEECGGGGCSC-----CCHHHHHHHHHHHHHHHHS
T ss_pred EECCCCcc-CCCCEEEEeccCCCc-----cCHHHHHHHHHHHHHHhcC
Confidence 68888887 78999999 554211 2234456667777777753
No 83
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=28.63 E-value=88 Score=20.54 Aligned_cols=42 Identities=17% Similarity=0.094 Sum_probs=33.8
Q ss_pred ccCCeEEecCCCcCCCC------CCChHHHHHHHHHHHHHHHHhhhCC
Q psy15532 19 GVENVRVADASVFPTQL------NCNPISVVIMTAEKCAQMVLDKNKV 60 (60)
Q Consensus 19 g~~nL~V~D~Si~P~~~------~~np~~t~~ala~r~a~~i~~~~~~ 60 (60)
|.+|.++-++.+-+.-. +.-+..-+..|++++-+.+.+++|+
T Consensus 262 GlkG~~~G~a~vs~kha~fivN~g~Ata~dv~~L~~~v~~~V~~~fgv 309 (322)
T 3tx1_A 262 GLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDV 309 (322)
T ss_dssp TCTTCEETTEEECSSCTTCEEECSSCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCceeCCeEEEcCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
Confidence 67888888887777544 3346789999999999999999875
No 84
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=28.47 E-value=69 Score=19.65 Aligned_cols=43 Identities=16% Similarity=0.201 Sum_probs=26.0
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDK 57 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~ 57 (60)
+||+++|. -++|+|.+ |..-.|. .-..+.++-|.++|..|.+.
T Consensus 255 ~vd~~~~T-s~p~IyA~GDv~~~~~----~~~~~A~~~G~~AA~~i~~~ 298 (304)
T 4fk1_A 255 VIDDFGRT-SEKNIYLAGETTTQGP----SSLIIAASQGNKAAIAINSD 298 (304)
T ss_dssp CSSTTCBC-SSTTEEECSHHHHTSC----CCHHHHHHHHHHHHHHHHHH
T ss_pred EECcCCcc-CCCCEEEEeccCCCcc----hHHHHHHHHHHHHHHHHHHH
Confidence 68988886 78999999 5432211 11334455566777666443
No 85
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=28.25 E-value=58 Score=21.49 Aligned_cols=46 Identities=17% Similarity=0.257 Sum_probs=30.9
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCC-----hHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCN-----PISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~n-----p~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..-.|...... .......-|..+|+.|.
T Consensus 266 i~Vd~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 266 IVINEHMQT-SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp EECCTTSBC-SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred EEECCCccc-CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 468888887 78999999 766665432221 23456667777777765
No 86
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=27.98 E-value=1.3e+02 Score=19.86 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=27.7
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
=+||+++|. ..+|+|.+ |..-.|. -......-|..+|+.|..
T Consensus 307 i~vd~~~~t-~~~~IyA~GD~~~~~~-----~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 307 LVIDDQFNS-KFPHIKVVGDVTFGPM-----LAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp BCCCTTSBC-SSTTEEECGGGSSSCC-----CHHHHHHHHHHHHHHHHH
T ss_pred EeECcCCcc-CCCCEEEeeccCCCcc-----cHHHHHHHHHHHHHHHcC
Confidence 367888884 78999999 6554332 133455667777777653
No 87
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=27.48 E-value=1.2e+02 Score=19.97 Aligned_cols=40 Identities=20% Similarity=0.235 Sum_probs=26.5
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
+||+++|. ..+|+|.+ |..-.|. .......-|..+|+.|.
T Consensus 292 ~vd~~~~t-~~~~iya~GD~~~~~~-----~~~~A~~~g~~aa~~i~ 332 (467)
T 1zk7_A 292 VIDQGMRT-SNPNIYAAGDCTDQPQ-----FVYVAAAAGTRAAINMT 332 (467)
T ss_dssp CCCTTCBC-SSTTEEECSTTBSSCC-----CHHHHHHHHHHHHHHHT
T ss_pred EECCCccc-CCCCEEEEeccCCCcc-----cHHHHHHHHHHHHHHHc
Confidence 67888887 78999999 5554442 23345566667776654
No 88
>2jb0_B Colicin E7; hydrolase/inhibitor, hydrolase/inhibitor complex, zinc, toxin, plasmid, nuclease, hydrolase, antibiotic, H-N-H motif, bacteriocin; 1.91A {Escherichia coli} SCOP: d.4.1.1 PDB: 3fbd_A 2jaz_B 2jbg_B 3gkl_A 3gjn_B 1pt3_A 2ivh_A 1ujz_B 2erh_B
Probab=26.40 E-value=22 Score=21.24 Aligned_cols=17 Identities=18% Similarity=0.206 Sum_probs=12.7
Q ss_pred eecCCCceeccCCeEEe
Q psy15532 10 VVDDQLLVHGVENVRVA 26 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~ 26 (60)
.++..|.||.++||+|+
T Consensus 103 ~I~~GG~VYdlDNL~i~ 119 (131)
T 2jb0_B 103 PISQNGGVYDMDNISVV 119 (131)
T ss_dssp CCC--CCSSBGGGEEEE
T ss_pred hhhcCCeeeeeeeEEEc
Confidence 35667899999999997
No 89
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=26.26 E-value=1.4e+02 Score=19.59 Aligned_cols=41 Identities=15% Similarity=0.175 Sum_probs=26.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..-.|. -......-|..+|+.|.
T Consensus 299 i~vd~~~~t-~~~~Iya~GD~~~~~~-----~~~~A~~~g~~aa~~i~ 340 (470)
T 1dxl_A 299 ILVNERFST-NVSGVYAIGDVIPGPM-----LAHKAEEDGVACVEYLA 340 (470)
T ss_dssp BCCCTTCBC-SSTTEEECSTTSSSCC-----CHHHHHHHHHHHHHHHT
T ss_pred EeECcCCcc-CCCCEEEEeccCCCCc-----cHHHHHHHHHHHHHHHc
Confidence 368888885 78999999 5543221 12334555677777664
No 90
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=25.95 E-value=1.1e+02 Score=19.99 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=31.0
Q ss_pred CceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 8 EAVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 8 ~~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
+=+||.++|. ..+|+|.+ |..-+|.... ........-|..+|+.|.
T Consensus 246 gi~vd~~~~t-~~~~IyA~GD~a~~~~~~~-~~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 246 GILVNDHMET-SIKDIYACGDVAEFYGKNP-GLINIANKQGEVAGLNAC 292 (385)
T ss_dssp SEEECTTCBC-SSTTEEECGGGEEETTBCC-CCHHHHHHHHHHHHHHHT
T ss_pred CEEECCCccc-CCCCEEEEEeeEecCCCcc-cHHHHHHHHHHHHHHHhc
Confidence 3478998997 89999999 7666654211 124455666777777765
No 91
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=25.40 E-value=1.4e+02 Score=19.76 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=26.9
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..-.|. -......-|..+|+.|.
T Consensus 302 i~vd~~~~t-~~~~IyA~GD~~~~~~-----~~~~A~~~g~~aa~~i~ 343 (474)
T 1zmd_A 302 IPVNTRFQT-KIPNIYAIGDVVAGPM-----LAHKAEDEGIICVEGMA 343 (474)
T ss_dssp CCCCTTCBC-SSTTEEECGGGSSSCC-----CHHHHHHHHHHHHHHHT
T ss_pred EEECcCCcc-CCCCEEEeeecCCCCc-----cHHHHHHHHHHHHHHhc
Confidence 368888885 78999999 6544331 12345556677777664
No 92
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=25.07 E-value=1.3e+02 Score=19.96 Aligned_cols=41 Identities=17% Similarity=0.115 Sum_probs=26.6
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=.||+++|. ..+|+|.+ |..-.| .-......-|..+|+.|.
T Consensus 306 i~vd~~~~t-~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~ 347 (482)
T 1ojt_A 306 IEVDKQMRT-NVPHIYAIGDIVGQP-----MLAHKAVHEGHVAAENCA 347 (482)
T ss_dssp CCCCTTSBC-SSTTEEECGGGTCSS-----CCHHHHHHHHHHHHHHHT
T ss_pred EeeCCCccc-CCCCEEEEEcccCCC-----ccHHHHHHHHHHHHHHHc
Confidence 378998996 78999999 554322 112344556666676664
No 93
>1fr2_B Colicin E9; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: d.4.1.1 PDB: 1bxi_B 1emv_B 1fsj_B 2gyk_B 2gze_B 2gzf_B 2gzg_B 2gzi_B 2gzj_B 2k5x_B 2vlo_B 2wpt_B 2vlp_B 2vln_B 2vlq_B 1v13_A 1v14_A 1v15_A 3u43_B 1znv_B ...
Probab=24.97 E-value=22 Score=21.31 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=14.1
Q ss_pred eecCCCceeccCCeEEe
Q psy15532 10 VVDDQLLVHGVENVRVA 26 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~ 26 (60)
.++..|.||.++||+|+
T Consensus 106 ~I~~GG~VYdlDNL~i~ 122 (134)
T 1fr2_B 106 PISQGGEVYDMDNIRVT 122 (134)
T ss_dssp CGGGTCCSSBGGGEEEE
T ss_pred hhhcCCeeeeeecEEEc
Confidence 35667899999999997
No 94
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.88 E-value=1.3e+02 Score=20.28 Aligned_cols=20 Identities=30% Similarity=0.468 Sum_probs=15.9
Q ss_pred eecCCCceeccCCeEEe-cCCC
Q psy15532 10 VVDDQLLVHGVENVRVA-DASV 30 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si 30 (60)
+||+++|. ..+|+|.+ |...
T Consensus 295 ~vd~~~~t-~~~~iya~GD~~~ 315 (500)
T 1onf_A 295 VVDENQRT-SVNNIYAVGDCCM 315 (500)
T ss_dssp EECTTCBC-SSSSEEECSTTEE
T ss_pred EECCCccc-CCCCEEEEecccc
Confidence 58888884 78999999 6653
No 95
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=24.73 E-value=1.4e+02 Score=19.67 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=26.4
Q ss_pred ceecCCCceeccCCeEEe-cCCC-cCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASV-FPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si-~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..- .|. -......-|..+|+.|.
T Consensus 296 i~vd~~~~t-~~~~IyA~GD~~~~~~~-----~~~~A~~~g~~aa~~i~ 338 (468)
T 2qae_A 296 VKIGDHFET-SIPDVYAIGDVVDKGPM-----LAHKAEDEGVACAEILA 338 (468)
T ss_dssp BCCCTTSBC-SSTTEEECGGGBSSSCS-----CHHHHHHHHHHHHHHHT
T ss_pred EeECCCccc-CCCCEEEeeccCCCCCc-----cHhHHHHHHHHHHHHHc
Confidence 368999996 88999999 5543 121 12334555667776664
No 96
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=24.41 E-value=1.5e+02 Score=19.68 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=25.6
Q ss_pred eecCCCceeccCCeEEe-cCCC-cCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASV-FPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si-~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.||.++|. .++|+|.+ |..- .|. -......-|..+|+.|..
T Consensus 309 ~vd~~~~t-~~~~IyA~GD~~~~~~~-----~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 309 IVDAQEAT-SVPHIYAIGDVAEGRPE-----LTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp CCCTTSBC-SSTTEEECGGGBTTCCC-----CHHHHHHHHHHHHHHHHS
T ss_pred eECCCCcc-CCCCEEEeEEecCCCCc-----chhHHHHHHHHHHHHHcC
Confidence 67999997 89999999 5431 111 122344556667776653
No 97
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=24.41 E-value=1.4e+02 Score=19.87 Aligned_cols=38 Identities=13% Similarity=0.136 Sum_probs=26.7
Q ss_pred cCCeEEecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 20 VENVRVADASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 20 ~~nL~V~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
+.|||.+..+.-..-++ ..--.+.-|+|+|+.|.+.++
T Consensus 418 ~~~L~fAG~~t~~~~~g--~v~GAi~SG~~aA~~i~~~l~ 455 (520)
T 1s3e_A 418 VDRIYFAGTETATHWSG--YMEGAVEAGERAAREILHAMG 455 (520)
T ss_dssp BTTEEECSGGGCSSSTT--SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeehhhcCcCcE--EhHHHHHHHHHHHHHHHHHHh
Confidence 57999998776433332 355567789999999887653
No 98
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=24.34 E-value=1.3e+02 Score=19.25 Aligned_cols=45 Identities=20% Similarity=0.108 Sum_probs=27.3
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=+||+++|. ..+|+|.+ |..-++..+.. .......-|..+|+.|.
T Consensus 259 i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~-~~~~a~~~g~~~a~~i~ 304 (384)
T 2v3a_A 259 IVVDRSLRT-SHANIYALGDCAEVDGLNLL-YVMPLMACARALAQTLA 304 (384)
T ss_dssp EEECTTCBC-SSTTEEECGGGEEETTBCCC-SHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCC-CCCCEEEeeeeeeECCCCcc-hHHHHHHHHHHHHHHhc
Confidence 468888884 78999999 55544322111 12234556666776664
No 99
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=24.06 E-value=98 Score=16.99 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=22.2
Q ss_pred ccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 19 GVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 19 g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
...+|+++ |+ +. ..-.-..+.-|.++|+.|.+.+.
T Consensus 293 ~~~~v~l~GDa-~~-----g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 293 ADLGIYVCGDW-CL-----SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTTEEECCGG-GT-----TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecc-cC-----CcCHHHHHHHHHHHHHHHHHHhh
Confidence 45788988 64 21 11234456678888888877653
No 100
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=23.93 E-value=1.3e+02 Score=20.15 Aligned_cols=41 Identities=20% Similarity=0.091 Sum_probs=26.7
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
+||+++|. ..+|+|.+ |..-.|. -......-|..+|+.|..
T Consensus 300 ~Vd~~~~t-~~~~IyA~GD~~~~~~-----l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 300 TVDRVSRT-LATGIYAAGDCTGLLP-----LASVAAMQGRIAMYHALG 341 (499)
T ss_dssp CCCSSSBC-SSTTEEECSGGGTSCS-----CHHHHHHHHHHHHHHHTT
T ss_pred EECCCccc-CCCCEEEEeccCCCcc-----cHHHHHHHHHHHHHHhcC
Confidence 68888887 78999999 5543321 123455566677776653
No 101
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.68 E-value=1.4e+02 Score=19.74 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=25.8
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
.||+++|. ..+|+|++ |..-.|. -......-|..+|+.|.
T Consensus 288 ~vd~~~~t-~~~~Iya~GD~~~~~~-----~~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 288 AIDERCQT-SMHNVWAIGDVAGEPM-----LAHRAMAQGEMVAEIIA 328 (458)
T ss_dssp CCCTTCBC-SSTTEEECGGGGCSSC-----CHHHHHHHHHHHHHHHT
T ss_pred eECCCCcC-CCCCEEEeeccCCCcc-----cHHHHHHHHHHHHHHhc
Confidence 57888884 78999999 5543331 23345566677777664
No 102
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=23.37 E-value=1.3e+02 Score=18.13 Aligned_cols=46 Identities=13% Similarity=-0.013 Sum_probs=27.1
Q ss_pred CCCceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 6 DPEAVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 6 ~~~~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
+.+-+||.++|. -++|+|.+ |..-.|. .-..+.++-|..+|..+.+
T Consensus 263 ~~G~iv~~~~~T-s~pgIyA~GDv~~~~~----~~~~~A~~~G~~AA~~~~~ 309 (314)
T 4a5l_A 263 DDGYILTEGPKT-SVDGVFACGDVCDRVY----RQAIVAAGSGCMAALSCEK 309 (314)
T ss_dssp TTSCBCCBTTBC-SSTTEEECSTTTCSSC----CCHHHHHHHHHHHHHHHHH
T ss_pred CCeeEeCCCCcc-CCCCEEEEEeccCCcc----hHHHHHHHHHHHHHHHHHH
Confidence 445577877775 68999999 6543332 1233444455566655543
No 103
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=23.14 E-value=14 Score=24.45 Aligned_cols=14 Identities=29% Similarity=0.256 Sum_probs=12.4
Q ss_pred CceeccCCeEEecC
Q psy15532 15 LLVHGVENVRVADA 28 (60)
Q Consensus 15 ~~v~g~~nL~V~D~ 28 (60)
+|.+|+++++|.||
T Consensus 134 Lr~~Gh~~V~vLdG 147 (327)
T 3utn_X 134 LGVMGHPKVYLLNN 147 (327)
T ss_dssp HHHTTCSEEEEESC
T ss_pred HHHcCCCceeeccc
Confidence 57789999999997
No 104
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=23.04 E-value=1.5e+02 Score=19.80 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=27.1
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.||+++|. ..+|+|.+ |..-.| .-......-|..+|+.|..
T Consensus 309 ~Vd~~~~t-~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 309 KVDAYSKT-NVDNIYAIGDVTDRV-----MLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CCCTTCBC-SSTTEEECGGGGCSC-----CCHHHHHHHHHHHHHHHHS
T ss_pred EECCCCcc-CCCCEEEEeccCCCc-----cCHHHHHHHHHHHHHHhcC
Confidence 67888886 78999999 544211 1234456667777777753
No 105
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=22.54 E-value=1.7e+02 Score=19.87 Aligned_cols=42 Identities=19% Similarity=0.067 Sum_probs=25.6
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=.||.++|. .++|+|.+ |..--+ ..-......-|..+|+.|.
T Consensus 336 I~Vd~~~~T-s~~~IyA~GD~~~g~----~~~~~~A~~~g~~aa~~i~ 378 (519)
T 3qfa_A 336 IPVTDEEQT-NVPYIYAIGDILEDK----VELTPVAIQAGRLLAQRLY 378 (519)
T ss_dssp BCCCTTSBC-SSTTEEECGGGBSSS----CCCHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCcc-CCCCEEEEEeccCCC----CccHHHHHHHHHHHHHHHc
Confidence 368889996 89999999 543111 0112233455666777665
No 106
>2zk9_X Protein-glutaminase; deamidation glutaminase, hydrolase; 1.15A {Chryseobacterium proteolyticum} PDB: 2ksv_A 2z8t_X
Probab=21.87 E-value=63 Score=20.30 Aligned_cols=20 Identities=25% Similarity=0.393 Sum_probs=15.8
Q ss_pred ceeccCCe---EEecCCCcCCCC
Q psy15532 16 LVHGVENV---RVADASVFPTQL 35 (60)
Q Consensus 16 ~v~g~~nL---~V~D~Si~P~~~ 35 (60)
+|++-+|. +|+|=|+||+-|
T Consensus 89 ~Vk~~~G~v~~mVIDPsLfs~~P 111 (185)
T 2zk9_X 89 SYKNASGVTEKRIIDPSLFSSGP 111 (185)
T ss_dssp EEECTTSCEEEEEECTTTCSSSC
T ss_pred EEecCCCceeEEEECCccCCCCC
Confidence 56666666 999999999865
No 107
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=21.86 E-value=2e+02 Score=21.41 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=29.8
Q ss_pred eecCCCce----eccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHhhhC
Q psy15532 10 VVDDQLLV----HGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLDKNK 59 (60)
Q Consensus 10 Vvd~~~~v----~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~~ 59 (60)
.+|.+++. ...+|+|++ |..-.+ .....+.-|..+|..|...++
T Consensus 396 ~vd~~~~~~v~~ts~p~IyAaGD~a~~~------~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 396 DWDTTIHAFVPADAVANQHLAGAMTGRL------DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp EEETTTTEEEECSCCTTEEECGGGGTCC------SHHHHHHHHHHHHHHHHHHTT
T ss_pred EEcCcccccccCCCCCCEEEEEecCCch------hHHHHHHHHHHHHHHHHHHcC
Confidence 46777774 368999999 444322 234677778888888877654
No 108
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.82 E-value=1.8e+02 Score=19.10 Aligned_cols=41 Identities=20% Similarity=0.120 Sum_probs=26.0
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=.||+++|. ..+|+|.+ |..-.|. -......-|..+|+.|.
T Consensus 290 i~vd~~~~t-~~~~Iya~GD~~~~~~-----~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 290 IEVDQQCRT-SVPNIFAIGDIVPGPA-----LAHKASYEGKVAAEAIA 331 (455)
T ss_dssp BCCCTTCBC-SSTTEEECGGGSSSCC-----CHHHHHHHHHHHHHHHT
T ss_pred EeeCCCccc-CCCCEEEEeccCCCcc-----cHHHHHHHHHHHHHHHc
Confidence 368888885 78999999 5543221 12344556666676664
No 109
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=21.72 E-value=33 Score=20.40 Aligned_cols=43 Identities=12% Similarity=0.112 Sum_probs=33.7
Q ss_pred ceeccCCeEE-ecCCCcCCCCCCChHHHHHHHHHHHHHHHHhhh
Q psy15532 16 LVHGVENVRV-ADASVFPTQLNCNPISVVIMTAEKCAQMVLDKN 58 (60)
Q Consensus 16 ~v~g~~nL~V-~D~Si~P~~~~~np~~t~~ala~r~a~~i~~~~ 58 (60)
++.|++=+++ -||-|-=.-.-.||.-.+.+++++++.+|.++-
T Consensus 102 ~v~gvd~~~fdedGkI~e~~vm~rP~k~l~al~~~m~~~l~~~~ 145 (155)
T 3flj_A 102 DAVGVDLITLNEGGLIQDFEVVMRPYKTVGALRDAMNARVMTDA 145 (155)
T ss_dssp EEEEEEEEEECTTSSEEEEEEEEECHHHHHHHHHHHHHHHHHCT
T ss_pred EEEEEEEEEEcCCCCEEEEEEEEChHHHHHHHHHHHHHHHcCCc
Confidence 5667777777 367666666677999999999999999987653
No 110
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=21.65 E-value=1.8e+02 Score=19.20 Aligned_cols=41 Identities=15% Similarity=0.024 Sum_probs=26.8
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.||+++| ..++|+|.+ |..-.| .-......-|..+|+.|..
T Consensus 289 ~vd~~~~-t~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 289 IVDAFSR-TSTPGIYALGDVTDRV-----QLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp CCCTTCB-CSSTTEEECSGGGSSC-----CCHHHHHHHHHHHHHHHHS
T ss_pred eECcCCC-CCCCCEEEEEecCCCC-----CChHHHHHHHHHHHHHHcC
Confidence 5888888 589999999 544311 1123456667777777753
No 111
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=21.56 E-value=1.8e+02 Score=19.13 Aligned_cols=41 Identities=17% Similarity=0.008 Sum_probs=26.4
Q ss_pred eecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 10 VVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 10 Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
.||.++|. .++|+|.+ |..--|. -......-|..+|+.|..
T Consensus 301 ~vd~~~~t-~~~~Iya~GD~~~~~~-----~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 301 YVDDYCAT-SVPGVYAIGDVVRGAM-----LAHKASEEGVVVAERIAG 342 (476)
T ss_dssp CCCTTSBC-SSTTEEECGGGSSSCC-----CHHHHHHHHHHHHHHHHH
T ss_pred eeCCCccc-CCCCEEEEEccCCCcc-----cHHHHHHHHHHHHHHhcC
Confidence 67888885 89999999 5442221 234455566677777653
No 112
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=21.00 E-value=1.8e+02 Score=19.01 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=27.2
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHHh
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVLD 56 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~~ 56 (60)
=.||+++|. ..+|+|++ |..-.| .-......-|..+|+.|..
T Consensus 284 i~vd~~~~t-~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 284 IPVDEHLRT-RVPHIYAIGDVVRGP-----MLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp CCCCTTSBC-SSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred EeECCCccc-CCCCEEEEecCCCCc-----cCHHHHHHhHHHHHHHHcC
Confidence 367888885 68999999 544332 1233456667777777653
No 113
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=20.98 E-value=29 Score=23.03 Aligned_cols=25 Identities=28% Similarity=0.224 Sum_probs=19.0
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCC
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQ 34 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~ 34 (60)
=+||.++|. ..+|+|.+ |..-.|..
T Consensus 261 i~vd~~~~t-~~~~IyA~GD~~~~~~~ 286 (452)
T 3oc4_A 261 IAVDAYLQT-SVPNVFAIGDCISVMNE 286 (452)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBCEEEG
T ss_pred EEECcCccC-CCCCEEEEEeeEEeccc
Confidence 468888887 79999999 66655543
No 114
>3im4_C Dual specificity A kinase-anchoring protein 2; four-helix bundle, acetylation, CAMP, CAMP-binding, disulfide bond, nucleotide-binding; 2.29A {Homo sapiens} PDB: 3tmh_D
Probab=20.57 E-value=71 Score=15.62 Aligned_cols=14 Identities=29% Similarity=0.200 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHhh
Q psy15532 44 IMTAEKCAQMVLDK 57 (60)
Q Consensus 44 ~ala~r~a~~i~~~ 57 (60)
--+|.++|+.|.++
T Consensus 15 EEMAWqIA~MIV~D 28 (45)
T 3im4_C 15 EELAWKIAKMIVSD 28 (45)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35788899988764
No 115
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=20.19 E-value=2e+02 Score=19.04 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=26.5
Q ss_pred ceecCCCceeccCCeEEe-cCCCcCCCCCCChHHHHHHHHHHHHHHHH
Q psy15532 9 AVVDDQLLVHGVENVRVA-DASVFPTQLNCNPISVVIMTAEKCAQMVL 55 (60)
Q Consensus 9 ~Vvd~~~~v~g~~nL~V~-D~Si~P~~~~~np~~t~~ala~r~a~~i~ 55 (60)
=.||+++|. ..+|+|.+ |..-.|. -......-|..+|+.|.
T Consensus 291 i~vd~~~~t-~~~~Iya~GD~~~~~~-----l~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 291 IRVNARMET-SVPGVYAIGDAARPPL-----LAHKAMREGLIAAENAA 332 (464)
T ss_dssp BCCCTTCBC-SSTTEEECGGGTCSSC-----CHHHHHHHHHHHHHHHT
T ss_pred EEECCCccc-CCCCEEEEeccCCCcc-----cHHHHHHHHHHHHHHhc
Confidence 468888885 78999999 5543221 12345556667777664
No 116
>3a54_A Protein-glutaminase; mutant structure like A substrate-enzyme complex, hydrolase; 1.50A {Chryseobacterium proteolyticum} PDB: 3a55_A 3a56_A*
Probab=20.06 E-value=68 Score=21.53 Aligned_cols=20 Identities=25% Similarity=0.393 Sum_probs=16.7
Q ss_pred ceeccCCe---EEecCCCcCCCC
Q psy15532 16 LVHGVENV---RVADASVFPTQL 35 (60)
Q Consensus 16 ~v~g~~nL---~V~D~Si~P~~~ 35 (60)
.|++-+|+ +|+|=|+||+-|
T Consensus 203 ~Vk~~~G~v~kmVIDPsLfss~P 225 (305)
T 3a54_A 203 SYKNASGVTEKRIIDPSLFSSGP 225 (305)
T ss_dssp EEECTTSCEEEEEECTTTCSSSC
T ss_pred EEecCCCceeeEEECCccCCCCC
Confidence 46777787 999999999866
No 117
>1qey_A MNT-C, protein (regulatory protein MNT); oligomerization, transcriptional control, P22 MNT repressor, gene regulation; NMR {Enterobacteria phage P22} SCOP: h.2.1.1
Probab=20.01 E-value=58 Score=14.74 Aligned_cols=11 Identities=27% Similarity=0.169 Sum_probs=6.5
Q ss_pred HHHHHHHHHhh
Q psy15532 47 AEKCAQMVLDK 57 (60)
Q Consensus 47 a~r~a~~i~~~ 57 (60)
|||.|+.+.+.
T Consensus 4 aER~Ad~qse~ 14 (31)
T 1qey_A 4 AERLADEQSEL 14 (31)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56677665543
Done!