BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15536
(200 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 150 bits (379), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 99/142 (69%), Gaps = 2/142 (1%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLK-KGLVTDEIVKH-YHIPDELRLGSGLKLFDFLA 117
P E G+FLALDLGGTNFRV+ + + GL E+ Y IP+++ GSG +LFD +A
Sbjct: 58 PDGTEHGEFLALDLGGTNFRVLWVKVTDNGLQKVEMENQIYAIPEDIMRGSGTQLFDHIA 117
Query: 118 ACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKD 177
C+++F+ + Q+ D+ +P+GFTFSFP HQ LD LV+WTK FKSSGVE DVV +++
Sbjct: 118 ECLANFMDKLQIKDKKLPLGFTFSFPCHQTKLDESFLVSWTKGFKSSGVEGRDVVALIRK 177
Query: 178 AIHRRQDNHVEIVCVLNDTTGT 199
AI RR D ++IV V+NDT GT
Sbjct: 178 AIQRRGDFDIDIVAVVNDTVGT 199
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 97/142 (68%), Gaps = 2/142 (1%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIV--KHYHIPDELRLGSGLKLFDFLA 117
P E+G FLALDLGGTNFRV+L+ ++ G + K Y IP E+ G+G +LFD +
Sbjct: 506 PDGTEKGDFLALDLGGTNFRVLLVRVRNGKWGGVEMHNKIYAIPQEVMHGTGDELFDHIV 565
Query: 118 ACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKD 177
CI+DF+ + +P+GFTFSFP Q SLD IL+ WTK FK+SG E EDVV +LK+
Sbjct: 566 QCIADFLEYMGMKGVSLPLGFTFSFPCQQNSLDESILLKWTKGFKASGCEGEDVVTLLKE 625
Query: 178 AIHRRQDNHVEIVCVLNDTTGT 199
AIHRR++ +++V V+NDT GT
Sbjct: 626 AIHRREEFDLDVVAVVNDTVGT 647
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
GT++ DH IGLI+GTGSNACY+E+ + E G++ +E G F
Sbjct: 198 GTMMTCGYDDHNCEIGLIVGTGSNACYMEEMRHIDMVE----GDEGRMCINMEWGAF 250
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
GT++ D +GLI+GTGSNACY+E+ V+ E GE+ +E G F
Sbjct: 646 GTMMTCGFEDPHCEVGLIVGTGSNACYMEEMRNVELVE----GEEGRMCVNMEWGAF 698
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 4/141 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGL-VTDEIVKHYHIPDELRLGSGLKLFDFLAA 118
P E+G FLALDLGGTNFRV+L+ + G+ +T EI Y IP+ + GSG +LFD +
Sbjct: 53 PDGSERGDFLALDLGGTNFRVLLVRVTTGVQITSEI---YSIPETVAQGSGQQLFDHIVD 109
Query: 119 CISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKDA 178
CI DF + + + +P+GFTFSFP Q LD GIL+ WTK FK+S E +DVV +L++A
Sbjct: 110 CIVDFQQKQGLSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREA 169
Query: 179 IHRRQDNHVEIVCVLNDTTGT 199
I RRQ + +V ++NDT GT
Sbjct: 170 ITRRQAVELNVVAIVNDTVGT 190
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKV 45
GT++ D + IGLI+GTG+NACY+E+ V
Sbjct: 189 GTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNV 222
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKG--LVTDEIVKHYHIPDELRLGSGLKLFDFLA 117
P E G FLALDLGGTNFRV+L+ ++ G + K Y IP E+ G+G +LFD +
Sbjct: 520 PDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIV 579
Query: 118 ACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKD 177
+CISDF+ + +P+GFTFSFP Q SLD+GIL+TWTK FK++ DVV +L+D
Sbjct: 580 SCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRD 639
Query: 178 AIHRRQDNHVEIVCVLNDTTGT 199
AI RR++ +++V V+NDT GT
Sbjct: 640 AIKRREEFDLDVVAVVNDTVGT 661
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Query: 58 NFPRKIEQGQFLALDLGGTNFRVILMHL--KKGLVTDEIVKHYHIPDELRLGSGLKLFDF 115
+ P E+G F+ALDLGG++FR++ + + +K + Y P+ + GSG +LFD
Sbjct: 70 SIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDH 129
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
+A C+ DF+ + ++ D+ +P+GFTFSFP Q +D IL+TWTK FK+SGVE DVVK+L
Sbjct: 130 VAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLL 189
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
AI +R D IV V+NDT GT
Sbjct: 190 NKAIKKRGDYDANIVAVVNDTVGT 213
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
GT++ A + +GLI+GTGSNACY+E+ V+ E G++ +E G F
Sbjct: 660 GTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVE----GDQGQMCINMEWGAF 712
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEK 41
GT++ D +GLI+GTG+NACY+E+
Sbjct: 212 GTMMTCGYDDQHCEVGLIIGTGTNACYMEE 241
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKG--LVTDEIVKHYHIPDELRLGSGLKLFDFLA 117
P E G FLALDLGGTNFRV+L+ ++ G + K Y IP E+ G+G +LFD +
Sbjct: 520 PDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIV 579
Query: 118 ACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKD 177
+CISDF+ + +P+GFTFSFP Q SLD+GIL+TWTK FK++ DVV +L+D
Sbjct: 580 SCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRD 639
Query: 178 AIHRRQDNHVEIVCVLNDTTGT 199
AI RR++ +++V V+NDT GT
Sbjct: 640 AIKRREEFDLDVVAVVNDTVGT 661
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Query: 58 NFPRKIEQGQFLALDLGGTNFRVILMHL--KKGLVTDEIVKHYHIPDELRLGSGLKLFDF 115
+ P E+G F+ALDLGG++FR++ + + +K + Y P+ + GSG +LFD
Sbjct: 70 SIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDH 129
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
+A C+ DF+ + ++ D+ +P+GFTFSFP Q +D IL+TWTK FK+SGVE DVVK+L
Sbjct: 130 VAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLL 189
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
AI +R D IV V+NDT GT
Sbjct: 190 NKAIKKRGDYDANIVAVVNDTVGT 213
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
GT++ A + +GLI+GTGSNACY+E+ V+ E G++ +E G F
Sbjct: 660 GTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVE----GDQGQMCINMEWGAF 712
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEK 41
GT++ D +GLI+GTG+NACY+E+
Sbjct: 212 GTMMTCGYDDQHCEVGLIIGTGTNACYMEE 241
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKG--LVTDEIVKHYHIPDELRLGSGLKLFDFLA 117
P E G FLALDLGGTNFRV+L+ ++ G + K Y IP E+ G+G +LFD +
Sbjct: 520 PDGTENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIV 579
Query: 118 ACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKD 177
+CISDF+ + +P+GFTFSFP Q SLD+GIL+TWTK FK++ DVV +L+D
Sbjct: 580 SCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRD 639
Query: 178 AIHRRQDNHVEIVCVLNDTTGT 199
AI RR++ +++V V+NDT GT
Sbjct: 640 AIKRREEFDLDVVAVVNDTVGT 661
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Query: 58 NFPRKIEQGQFLALDLGGTNFRVILMHL--KKGLVTDEIVKHYHIPDELRLGSGLKLFDF 115
+ P E+G F+ALDLGG++FR++ + + +K + Y P+ + GSG +LFD
Sbjct: 70 SIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDH 129
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
+A C+ DF+ + ++ D+ +P+GFTFSFP Q +D IL+TWTK FK+SGVE DVVK+L
Sbjct: 130 VAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLL 189
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
AI +R D IV V+NDT GT
Sbjct: 190 NKAIKKRGDYDANIVAVVNDTVGT 213
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
GT++ A + +GLI+GTGSNACY+E+ V+ E G++ +E G F
Sbjct: 660 GTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVE----GDQGQMCINMEWGAF 712
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEK 41
GT++ D +GLI+GTG+NACY+E+
Sbjct: 212 GTMMTCGYDDQHCEVGLIIGTGTNACYMEE 241
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
Query: 58 NFPRKIEQGQFLALDLGGTNFRVILMHLKKG--LVTDEIVKHYHIPDELRLGSGLKLFDF 115
+ P E G FLALDLGGTNFRV+L+ ++ G + K Y IP E+ G+G +LFD
Sbjct: 518 SIPDGTEHGDFLALDLGGTNFRVLLVKIRSGKKRTVEMHNKIYSIPLEIMQGTGDELFDH 577
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
+ +CISDF+ + +P+GFTFSFP HQ +LD GIL++WTK FK++ E DV +L
Sbjct: 578 IVSCISDFLDYMGIKGPRMPLGFTFSFPCHQTNLDCGILISWTKGFKATDCEGHDVASLL 637
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DA+ RR++ +++V V+NDT GT
Sbjct: 638 RDAVKRREEFDLDVVAVVNDTVGT 661
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 4/145 (2%)
Query: 58 NFPRKIEQGQFLALDLGGTNFRVI---LMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFD 114
+ P E+G F+ALDLGG++FR++ + H K V+ E + Y P+ + GSG +LFD
Sbjct: 70 SIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVSME-SEIYDTPENIVHGSGTQLFD 128
Query: 115 FLAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKM 174
+A C+ DF+ + ++ D+ +P+GFTFSFP Q +D +L+TWTK FK+SGVE DVVK+
Sbjct: 129 HVADCLGDFMEKKKIKDKKLPVGFTFSFPCRQSKIDEAVLITWTKRFKASGVEGADVVKL 188
Query: 175 LKDAIHRRQDNHVEIVCVLNDTTGT 199
L AI +R D IV V+NDT GT
Sbjct: 189 LNKAIKKRGDYDANIVAVVNDTVGT 213
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
GT++ A + IGLI+GTG+NACY+E+ V+ E G + +E G F
Sbjct: 660 GTMMTCAYEEPTCEIGLIVGTGTNACYMEEMKNVEMVE----GNQGQMCINMEWGAF 712
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEK 41
GT++ D + +GLI+GTG+NACY+E+
Sbjct: 212 GTMMTCGYDDQQCEVGLIIGTGTNACYMEE 241
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%), Gaps = 2/142 (1%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKG--LVTDEIVKHYHIPDELRLGSGLKLFDFLA 117
P E G FLALDLGG NFRV+L+ ++ G + K Y IP E+ G+G +LFD +
Sbjct: 520 PDGTENGDFLALDLGGANFRVLLVKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIV 579
Query: 118 ACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKD 177
+CISDF+ + +P+GFTFSFP Q SLD+GIL+TWTK FK++ DVV +L+D
Sbjct: 580 SCISDFLDYMGIKGPRMPLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRD 639
Query: 178 AIHRRQDNHVEIVCVLNDTTGT 199
AI RR++ +++V V+NDT GT
Sbjct: 640 AIKRREEFDLDVVAVVNDTVGT 661
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Query: 58 NFPRKIEQGQFLALDLGGTNFRVILMHL--KKGLVTDEIVKHYHIPDELRLGSGLKLFDF 115
+ P E+G F+ALDLGG++FR++ + + +K + Y P+ + GSG +LFD
Sbjct: 70 SIPDGSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDTPENIVHGSGSQLFDH 129
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
+A C+ DF+ + ++ D+ +P+GFTFSFP Q +D IL+TWTK FK+SGVE DVVK+L
Sbjct: 130 VAECLGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLL 189
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
AI +R D IV V+NDT GT
Sbjct: 190 NKAIKKRGDYDANIVAVVNDTVGT 213
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
GT++ A + +GLI+GTGSNACY+E+ V+ E G++ +E G F
Sbjct: 660 GTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVE----GDQGQMCINMEWGAF 712
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEK 41
GT++ D +GLI+GTG+NACY+E+
Sbjct: 212 GTMMTCGYDDQHCEVGLIIGTGTNACYMEE 241
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism:
Observation Of Multiple Distinct Protein Conformations
Length = 473
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVK----HYHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 66 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 125
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 126 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 185
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 186 RDAIKRRGDFEMDVVAMVNDTVAT 209
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 217 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 260
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation
Length = 470
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVK----HYHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 71 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 130
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 131 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 190
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 191 RDAIKRRGDFEMDVVAMVNDTVAT 214
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 222 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 265
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A
Synthetic Activator
Length = 455
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVK----HYHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 56 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 115
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 116 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 175
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 176 RDAIKRRGDFEMDVVAMVNDTVAT 199
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 207 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 250
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And
Activator Showing A Mobile Flap
pdb|3FGU|A Chain A, Catalytic Complex Of Human Glucokinase
pdb|3ID8|A Chain A, Ternary Complex Of Human Pancreatic Glucokinase
Crystallized With Activator, Glucose And Amp-Pnp
pdb|3IDH|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose
pdb|3VEV|A Chain A, Glucokinase In Complex With An Activator And Glucose
pdb|3VF6|A Chain A, Glucokinase In Complex With Glucose And Activator
Length = 470
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVK----HYHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 71 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 130
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 131 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 190
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 191 RDAIKRRGDFEMDVVAMVNDTVAT 214
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 222 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 265
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose
pdb|4DHY|A Chain A, Crystal Structure Of Human Glucokinase In Complex With
Glucose And Activator
Length = 469
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVK----HYHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 70 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 129
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 130 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 189
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 190 RDAIKRRGDFEMDVVAMVNDTVAT 213
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 221 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 264
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide
Activator
pdb|3A0I|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
pdb|3GOI|A Chain A, Human Glucokinase In Complex With A Synthetic Activator
Length = 455
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVKH----YHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 56 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 115
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 116 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 175
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 176 RDAIKRRGDFEMDVVAMVNDTVAT 199
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 207 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 250
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3H1V|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
Length = 451
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVK----HYHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 52 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 111
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 112 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 171
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 172 RDAIKRRGDFEMDVVAMVNDTVAT 195
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 203 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 246
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3VEY|A Chain A, Glucokinase In Complex With Glucose And Atpgs
Length = 455
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%), Gaps = 4/144 (2%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVK----HYHIPDELRLGSGLKLFDF 115
P E G FL+LDLGGTNFRV+L+ + +G VK Y IP++ G+ LFD+
Sbjct: 56 PEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDY 115
Query: 116 LAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
++ CISDF+ ++Q+ + +P+GFTFSFP+ +D GIL+ WTK FK+SG E +VV +L
Sbjct: 116 ISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLL 175
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
+DAI RR D +++V ++NDT T
Sbjct: 176 RDAIKRRGDFEMDVVAMVNDTVAT 199
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 21 DHKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQF 68
DH+ +G+I+GTG NACY+E+ V+ E G++ E G F
Sbjct: 207 DHQCEVGMIVGTGCNACYMEEMQNVELVE----GDEGRMCVNTEWGAF 250
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O08|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O1B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Ii
pdb|3O1W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O1W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O4W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O4W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O5B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O5B|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O6W|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O6W|B Chain B, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O80|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Ix
(Open State)
pdb|3O8M|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Xi
With Glucose Bound (Closed State)
Length = 485
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
Query: 59 FPRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFDFLAA 118
+P E G FLALDLGGTN RV+L+ L D Y +PD LR G+ +L+ F+A
Sbjct: 73 YPTGKETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAK 132
Query: 119 CISDFVHEYQVH--DRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLK 176
C+ +FV E+ +P+GFTFS+P Q+ ++SG+L WTK F GVE DVV ML+
Sbjct: 133 CLKEFVDEWYPDGVSEPLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQ 192
Query: 177 DAIHRRQDNHVEIVCVLNDTTGT 199
+ I + + + +V ++NDTTGT
Sbjct: 193 EQIEKL-NIPINVVALINDTTGT 214
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWE---TERHGEKNNFPRKIEQGQF 68
GTL+ D +T +G+I+GTG N Y + ++ E E G + E G F
Sbjct: 213 GTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSF 272
Query: 69 LALDLGGTNFRVILMHLKKGLVTDE 93
N ++L K ++ DE
Sbjct: 273 -------DNEHLVLPRTKYDVIIDE 290
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 58 NFPRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGL-KLFDFL 116
+FP E G FLA+DLGGTN RV+L+ L D Y +PD +R +L++F+
Sbjct: 72 DFPTGKESGDFLAIDLGGTNLRVVLVKLGGDRTFDTTQSKYRLPDAMRTTQNPDELWEFI 131
Query: 117 AACISDFVHEY--QVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKM 174
A + F+ E Q IP+GFTFSFP Q ++ GIL WTK F +E DVV M
Sbjct: 132 ADSLKAFIDEQFPQGISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENHDVVPM 191
Query: 175 LKDAIHRRQDNHVEIVCVLNDTTGT 199
L+ I +R + +E+V ++NDTTGT
Sbjct: 192 LQKQITKR-NIPIEVVALINDTTGT 215
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLE 40
GTL+ D +T +G+I GTG N Y +
Sbjct: 214 GTLVASYYTDPETKMGVIFGTGVNGAYYD 242
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose
Length = 451
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
Query: 60 PRKIEQGQFLALDLGGTNFRVILMHLK-KGLVTDEIVKHYHIPDELRLGSGLKLFDFLAA 118
P E G FLALDLGGTN+RV+ + L+ KG + Y IP E GSG +LF ++A
Sbjct: 62 PNGTETGNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYCIPAEKMSGSGTELFKYIAE 121
Query: 119 CISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKDA 178
++DF+ + D+ +GFTFSFP Q+ L LV WTK F + GVE +V ++L+
Sbjct: 122 TLADFLENNGMKDKKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTE 181
Query: 179 IHRRQDNHVEIVCVLNDTTGT 199
+ +R+ N V+ V V+NDT GT
Sbjct: 182 LDKRELN-VKCVAVVNDTVGT 201
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVK 46
GTL A D K A+GLI+GTG+N Y+E + KV+
Sbjct: 200 GTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVE 234
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
Query: 59 FPRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGS-GLKLFDFLA 117
FP E G +LA+DLGGTN RV+L+ L D Y +P ++R +L+ F+A
Sbjct: 73 FPTGKESGNYLAIDLGGTNLRVVLVKLSGNHTFDTTQSKYKLPHDMRTTKHQEELWSFIA 132
Query: 118 ACISDFVHEYQVHDR--VIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKML 175
+ DF+ E ++ + +P+GFTFS+P Q ++ GIL WTK F VE DVV +L
Sbjct: 133 DSLKDFMVEQELLNTKDTLPLGFTFSYPASQNKINEGILQRWTKGFDIPNVEGHDVVPLL 192
Query: 176 KDAIHRRQDNHVEIVCVLNDTTGT 199
++ I +R+ +EIV ++NDT GT
Sbjct: 193 QNEISKRE-LPIEIVALINDTVGT 215
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 12 GTLLQGASLDHKTAIGLILGTGSNACYLEKADKVKHWETERHGE-KNNFPRKI--EQGQF 68
GTL+ D +T +G+I GTG N + + ++ E + + +N P I E G F
Sbjct: 214 GTLIASYYTDPETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSPMAINCEYGSF 273
Query: 69 LALDLGGTNFRVILMHLKKGLVTDE 93
N ++L K + DE
Sbjct: 274 -------DNEHLVLPRTKYDVAVDE 291
>pdb|3EO3|A Chain A, Crystal Structure Of The N-Acetylmannosamine Kinase Domain
Of Human Gne Protein
pdb|3EO3|B Chain B, Crystal Structure Of The N-Acetylmannosamine Kinase Domain
Of Human Gne Protein
pdb|3EO3|C Chain C, Crystal Structure Of The N-Acetylmannosamine Kinase Domain
Of Human Gne Protein
Length = 333
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 69 LALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFDFLAACISDFVHEYQ 128
LA+DLGGTN RV ++ +K EIVK Y + + L L C+ +
Sbjct: 23 LAVDLGGTNLRVAIVSMK-----GEIVKKYTQFNPKTYEERINL--ILQMCVEAAAEAVK 75
Query: 129 VHDRVIPMGFTFSFPMHQRSLDSGILVTWTK 159
++ R++ +G + ++ R GI++ TK
Sbjct: 76 LNCRILGVGISTGGRVNPR---EGIVLHSTK 103
>pdb|2YHY|A Chain A, Structure Of N-Acetylmannosamine Kinase In Complex With N-
Acetylmannosamine And Adp
pdb|2YI1|A Chain A, Crystal Structure Of N-Acetylmannosamine Kinase In Complex
With N-Acetyl Mannosamine 6-Phosphate And Adp
Length = 343
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 69 LALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFDFLAACISDFVHEYQ 128
LA+DLGGTN RV ++ +K EIVK Y + + L L C+ +
Sbjct: 33 LAVDLGGTNLRVAIVSMK-----GEIVKKYTQFNPKTYEERINL--ILQMCVEAAAEAVK 85
Query: 129 VHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKDAIH 180
++ R++ +G + ++ R GI++ TK + D+ L D +H
Sbjct: 86 LNCRILGVGISTGGRVNPR---EGIVLHSTKLIQEW--NSVDLRTPLSDTLH 132
>pdb|2YHW|A Chain A, High-Resolution Crystal Structures Of N-Acetylmannosamine
Kinase: Insights About Substrate Specificity, Activity
And Inhibitor Modelling
Length = 343
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 69 LALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFDFLAACISDFVHEYQ 128
LA+DLGGTN RV ++ +K EIVK Y + + L L C+ +
Sbjct: 33 LAVDLGGTNLRVAIVSMK-----GEIVKKYTQFNPKTYEERINL--ILQMCVEAAAEAVK 85
Query: 129 VHDRVIPMGFTFSFPMHQRSLDSGILVTWTKSFKSSGVEKEDVVKMLKDAIH 180
++ R++ +G + ++ R GI++ TK + D+ L D +H
Sbjct: 86 LNCRILGVGISTGGRVNPR---EGIVLHSTKLIQEW--NSVDLRTPLSDTLH 132
>pdb|3GB9|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GGS|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
Length = 311
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 22 HKTAIGLILGTGSNACYLEKADKVKHWETERHGEKNNFPRKIEQGQFLALDLGGTNFRVI 81
H+ + +I G+G DK+ + +GE NFPR G L G N R
Sbjct: 45 HRPQVAIICGSGLGGL----TDKLTQAQIFDYGEIPNFPRSTVPGHAGRLVFGFLNGRAC 100
Query: 82 LM 83
+M
Sbjct: 101 VM 102
>pdb|1UP8|A Chain A, Recombinant Vanadium-Dependent Bromoperoxidase From Red
Algae Corallina Pilulifera
pdb|1UP8|B Chain B, Recombinant Vanadium-Dependent Bromoperoxidase From Red
Algae Corallina Pilulifera
pdb|1UP8|C Chain C, Recombinant Vanadium-Dependent Bromoperoxidase From Red
Algae Corallina Pilulifera
pdb|1UP8|D Chain D, Recombinant Vanadium-Dependent Bromoperoxidase From Red
Algae Corallina Pilulifera
Length = 598
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 133 VIPMGFTFSFPMHQR-----SLDSGILVTWTKSFKSSGVEKEDVVKMLKD 177
++PM F P H ++ +G VT K+F SG+E + V ++ KD
Sbjct: 468 LLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKD 517
>pdb|2QOR|A Chain A, Crystal Structure Of Plasmodium Vivax Guanylate Kinase
Length = 204
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 55 EKNNFPRKIEQGQFLALDLGGTNF 78
+K++F RK+++GQFL D NF
Sbjct: 65 DKDDFERKLKEGQFLEFDKYANNF 88
>pdb|1XCR|A Chain A, Crystal Structure Of Longer Splice Variant Of Ptd012 From
Homo Sapiens Reveals A Novel Zinc-Containing Fold
pdb|1XCR|B Chain B, Crystal Structure Of Longer Splice Variant Of Ptd012 From
Homo Sapiens Reveals A Novel Zinc-Containing Fold
Length = 316
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 55 EKNNFPRKIEQGQFLALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFD 114
E FP K G+ ++GG + + L++ KK ++I K +P LG+G F
Sbjct: 45 EPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAGPFQ 104
Query: 115 FLAACISDFVHEYQVHDRVIPMGFTFSFPMHQRSLDSGILV 155
L S+F+ Q P S+ H D G L+
Sbjct: 105 TLGF-NSEFMPVIQTESEHKPP-VNGSYFAHVNPADGGCLL 143
>pdb|4H5L|A Chain A, Crystal Structure Of Toscana Virus Nucleocapsid Protein
Hexamer
pdb|4H5L|B Chain B, Crystal Structure Of Toscana Virus Nucleocapsid Protein
Hexamer
pdb|4H5L|C Chain C, Crystal Structure Of Toscana Virus Nucleocapsid Protein
Hexamer
pdb|4H5L|D Chain D, Crystal Structure Of Toscana Virus Nucleocapsid Protein
Hexamer
pdb|4H5L|E Chain E, Crystal Structure Of Toscana Virus Nucleocapsid Protein
Hexamer
pdb|4H5L|F Chain F, Crystal Structure Of Toscana Virus Nucleocapsid Protein
Hexamer
Length = 253
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 148 SLDSGILVTWTKSFKSSGVEKEDVVKMLKD---AIHRRQDNHVEIVCVLNDTTG 198
S DSG + W F G + + +V+++K+ A R V+++ VLN G
Sbjct: 17 SADSGTINAWVNEFAYQGFDPKRIVQLVKERGTAKGRDWKKDVKMMIVLNLVRG 70
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 17 GASLDHKTAI---GLILGTGSNACYLEKA-------DKVKHWETERHGEKNNFPRKIEQG 66
G ++ K A+ + G+ S A EK + + + +T R+ + F + IE G
Sbjct: 168 GKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIG 227
Query: 67 QFLALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFDFLAACISDFVH 125
+ G N R L+ + + E ++YHI +L + L F L +++ H
Sbjct: 228 FDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFH 286
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 17 GASLDHKTAI---GLILGTGSNACYLEKA-------DKVKHWETERHGEKNNFPRKIEQG 66
G ++ K A+ + G+ S A EK + + + +T R+ + F + IE G
Sbjct: 168 GKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIG 227
Query: 67 QFLALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFDFLAACISDFVH 125
+ G N R L+ + + E ++YHI +L + L F L +++ H
Sbjct: 228 FDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFH 286
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 17 GASLDHKTAI---GLILGTGSNACYLEKA-------DKVKHWETERHGEKNNFPRKIEQG 66
G ++ K A+ + G+ S A EK + + + +T R+ + F + IE G
Sbjct: 168 GKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIG 227
Query: 67 QFLALDLGGTNFRVILMHLKKGLVTDEIVKHYHIPDELRLGSGLKLFDFLAACISDFVH 125
+ G N R L+ + + E ++YHI +L + L F L +++ H
Sbjct: 228 FDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFH 286
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,467,205
Number of Sequences: 62578
Number of extensions: 284334
Number of successful extensions: 801
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 712
Number of HSP's gapped (non-prelim): 64
length of query: 200
length of database: 14,973,337
effective HSP length: 94
effective length of query: 106
effective length of database: 9,091,005
effective search space: 963646530
effective search space used: 963646530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)