Query psy15537
Match_columns 80
No_of_seqs 100 out of 586
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 23:52:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15537.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15537hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hm8_A Hexokinase-3; glucose, 99.9 8.3E-27 2.8E-31 178.8 4.5 78 1-78 361-444 (445)
2 3f9m_A Glucokinase; hexokinase 99.9 8.8E-26 3E-30 174.0 3.7 79 1-79 385-469 (470)
3 3o8m_A Hexokinase; rnaseh-like 99.9 4.7E-24 1.6E-28 164.7 6.2 77 1-77 393-476 (485)
4 2yhx_A Hexokinase B; transfera 99.8 1.3E-20 4.5E-25 144.2 6.9 77 1-78 367-450 (457)
5 1cza_N Hexokinase type I; stru 99.8 1.4E-19 4.6E-24 147.2 4.9 78 1-78 832-915 (917)
6 1bdg_A Hexokinase; phosphotran 99.7 1.5E-17 5E-22 126.9 3.9 74 1-74 376-450 (451)
7 1cza_N Hexokinase type I; stru 99.6 6.4E-16 2.2E-20 125.7 4.5 78 1-78 384-467 (917)
8 2ch5_A NAGK protein; transfera 95.0 0.088 3E-06 37.1 6.9 66 4-69 246-323 (347)
9 2qm1_A Glucokinase; alpha-beta 92.8 0.13 4.6E-06 35.7 4.3 63 4-68 251-319 (326)
10 2hoe_A N-acetylglucosamine kin 92.0 0.33 1.1E-05 35.0 5.7 64 4-69 303-370 (380)
11 3r8e_A Hypothetical sugar kina 91.2 0.31 1.1E-05 34.3 4.7 63 4-68 249-317 (321)
12 2e2o_A Hexokinase; acetate and 90.3 0.39 1.3E-05 33.2 4.4 59 4-69 228-286 (299)
13 3jvp_A Ribulokinase; PSI-II, N 88.8 0.58 2E-05 35.8 4.8 50 19-73 441-490 (572)
14 3l0q_A Xylulose kinase; xlylul 88.8 0.92 3.1E-05 34.5 5.9 48 19-72 444-491 (554)
15 3ifr_A Carbohydrate kinase, FG 88.7 1.3 4.4E-05 33.4 6.6 49 19-73 402-450 (508)
16 3vgl_A Glucokinase; ROK family 88.4 2 6.7E-05 30.1 7.1 61 4-66 241-308 (321)
17 3i8b_A Xylulose kinase; strain 87.7 1.3 4.4E-05 33.6 6.0 49 19-73 426-474 (515)
18 3ezw_A Glycerol kinase; glycer 87.4 1.3 4.5E-05 33.5 5.9 48 19-72 404-451 (526)
19 3ll3_A Gluconate kinase; xylul 86.4 1.6 5.3E-05 32.9 5.8 48 19-72 395-442 (504)
20 2p3r_A Glycerol kinase; glycer 85.6 1.9 6.4E-05 32.5 5.9 49 19-73 403-451 (510)
21 2gup_A ROK family protein; sug 84.8 2 6.9E-05 29.4 5.4 63 4-69 216-286 (292)
22 3g25_A Glycerol kinase; IDP007 84.7 1.6 5.4E-05 32.8 5.1 48 19-72 406-453 (501)
23 2d4w_A Glycerol kinase; alpha 84.7 2.3 8E-05 31.8 6.1 48 19-72 405-452 (504)
24 2aa4_A Mannac kinase, putative 84.2 1.1 3.8E-05 30.6 3.8 62 4-68 222-286 (289)
25 4e1j_A Glycerol kinase; struct 84.1 1.5 5.2E-05 33.2 4.9 47 20-72 428-474 (520)
26 1z05_A Transcriptional regulat 83.6 1.9 6.4E-05 31.5 5.0 63 4-69 346-414 (429)
27 4bc3_A Xylulose kinase; transf 82.7 1.8 6.1E-05 32.9 4.8 48 20-73 437-484 (538)
28 2dpn_A Glycerol kinase; thermu 82.7 2.7 9.1E-05 31.4 5.6 48 19-72 400-447 (495)
29 3h6e_A Carbohydrate kinase, FG 82.6 0.79 2.7E-05 34.7 2.7 57 8-71 379-436 (482)
30 2itm_A Xylulose kinase, xylulo 82.4 3.3 0.00011 30.8 6.0 48 19-72 388-436 (484)
31 3h3n_X Glycerol kinase; ATP-bi 82.3 1.7 6E-05 32.6 4.5 48 19-72 405-452 (506)
32 4db3_A Glcnac kinase, N-acetyl 82.2 2 6.9E-05 30.3 4.6 61 4-67 258-323 (327)
33 2w40_A Glycerol kinase, putati 82.0 2.7 9.3E-05 31.4 5.5 48 19-72 409-456 (503)
34 3htv_A D-allose kinase, alloki 81.2 6.4 0.00022 27.5 7.0 62 5-68 229-297 (310)
35 1z6r_A MLC protein; transcript 81.2 2.6 9E-05 30.3 5.0 63 4-68 323-391 (406)
36 3hz6_A Xylulokinase; xylulose, 80.2 1.7 5.7E-05 32.8 3.8 48 19-72 404-452 (511)
37 2zf5_O Glycerol kinase; hypert 78.7 3.3 0.00011 30.9 5.0 47 20-72 396-442 (497)
38 3qb0_A Actin-related protein 4 77.6 2.1 7.3E-05 32.8 3.7 42 30-71 425-472 (498)
39 4htl_A Beta-glucoside kinase; 77.1 11 0.00037 26.0 7.0 62 4-69 226-290 (297)
40 2ap1_A Putative regulator prot 76.1 1.2 4.3E-05 31.0 1.9 61 4-67 258-323 (327)
41 3vov_A Glucokinase, hexokinase 75.6 11 0.00037 26.1 6.7 64 4-69 226-294 (302)
42 2yhw_A Bifunctional UDP-N-acet 73.8 7.4 0.00025 27.2 5.5 60 4-68 273-336 (343)
43 2uyt_A Rhamnulokinase; rhamnos 65.4 9.1 0.00031 28.3 4.6 46 19-71 395-440 (489)
44 1saz_A Probable butyrate kinas 63.0 18 0.00061 26.1 5.7 61 4-67 282-345 (381)
45 2fxu_A Alpha-actin-1, actin, a 57.9 12 0.00042 26.5 4.1 49 20-70 297-349 (375)
46 2q2r_A Glucokinase 1, putative 53.2 22 0.00076 25.2 4.8 63 4-68 293-369 (373)
47 3s5p_A Ribose 5-phosphate isom 51.0 16 0.00055 24.5 3.5 35 30-68 62-96 (166)
48 1k8k_A ARP3, actin-like protei 49.3 12 0.00042 26.8 2.9 50 20-71 319-388 (418)
49 1k8k_B ARP2, actin-like protei 49.0 9.3 0.00032 27.6 2.2 49 21-71 302-365 (394)
50 1sz2_A Glucokinase, glucose ki 48.7 27 0.00093 24.3 4.6 64 4-68 253-324 (332)
51 4fo0_A Actin-related protein 8 48.3 17 0.00057 27.3 3.6 48 21-70 505-564 (593)
52 3k7p_A Ribose 5-phosphate isom 47.4 9.3 0.00032 26.0 1.9 34 31-68 66-99 (179)
53 1hux_A Activator of (R)-2-hydr 47.2 18 0.00062 24.8 3.4 46 20-71 211-257 (270)
54 2po1_A Probable exosome comple 47.1 44 0.0015 22.6 5.4 39 34-72 101-147 (249)
55 1o1x_A Ribose-5-phosphate isom 46.4 13 0.00044 24.7 2.4 35 30-68 53-87 (155)
56 3sgw_A Ribose 5-phosphate isom 45.8 11 0.00037 25.8 2.0 35 30-68 73-107 (184)
57 3ono_A Ribose/galactose isomer 45.1 11 0.00038 26.2 2.0 35 30-68 50-84 (214)
58 2vvr_A Ribose-5-phosphate isom 44.6 13 0.00046 24.3 2.3 35 30-68 42-76 (149)
59 3epq_A Putative fructokinase; 44.4 73 0.0025 22.0 6.2 63 4-69 213-288 (302)
60 2eel_A Cell death activator CI 43.7 31 0.0011 20.9 3.7 30 33-62 29-59 (91)
61 3he8_A Ribose-5-phosphate isom 43.6 14 0.00048 24.2 2.3 35 30-68 41-75 (149)
62 2pib_A Phosphorylated carbohyd 43.6 12 0.0004 22.8 1.8 27 20-46 5-31 (216)
63 4em8_A Ribose 5-phosphate isom 42.4 5.3 0.00018 26.4 -0.0 33 30-68 49-81 (148)
64 2vvp_A Ribose-5-phosphate isom 42.3 15 0.0005 24.5 2.2 35 30-68 45-79 (162)
65 3ph3_A Ribose-5-phosphate isom 41.8 15 0.00053 24.6 2.3 35 30-68 61-95 (169)
66 1zxo_A Conserved hypothetical 41.7 8.2 0.00028 26.5 0.9 44 18-68 233-276 (291)
67 2amy_A PMM 2, phosphomannomuta 41.0 15 0.00051 24.1 2.1 40 19-60 9-48 (246)
68 1rre_A ATP-dependent protease 39.1 37 0.0013 22.7 3.9 29 47-75 76-109 (200)
69 2go7_A Hydrolase, haloacid deh 38.1 12 0.00041 22.5 1.2 27 19-45 7-33 (207)
70 3mcp_A Glucokinase; structural 38.0 26 0.00089 25.4 3.1 40 4-46 248-287 (366)
71 2ppw_A Conserved domain protei 38.0 19 0.00066 25.0 2.3 35 30-68 51-85 (216)
72 3o0d_A YALI0A20350P, triacylgl 38.0 34 0.0012 24.1 3.7 36 37-76 139-177 (301)
73 3c5y_A Ribose/galactose isomer 37.9 24 0.00082 24.9 2.8 35 30-68 67-101 (231)
74 1uhm_A Histone H1, histone HHO 36.8 22 0.00074 20.4 2.1 17 30-46 3-19 (78)
75 3id1_A Regulator of sigma E pr 36.6 60 0.0021 18.5 4.6 41 17-61 23-63 (95)
76 3g7n_A Lipase; hydrolase fold, 35.9 38 0.0013 23.3 3.6 35 37-75 109-146 (258)
77 1woq_A Inorganic polyphosphate 35.8 18 0.00062 24.3 1.9 55 4-69 203-260 (267)
78 3d6j_A Putative haloacid dehal 35.0 15 0.00052 22.5 1.3 29 18-46 8-36 (225)
79 1te2_A Putative phosphatase; s 34.5 15 0.0005 22.6 1.2 28 18-45 11-38 (226)
80 2om6_A Probable phosphoserine 34.4 14 0.00048 22.9 1.1 27 19-45 7-33 (235)
81 1qg8_A Protein (spore coat pol 34.3 89 0.0031 19.8 6.9 58 6-71 19-85 (255)
82 2ah5_A COG0546: predicted phos 33.8 16 0.00056 22.9 1.3 27 19-45 7-33 (210)
83 2fue_A PMM 1, PMMH-22, phospho 33.5 22 0.00076 23.6 2.0 38 19-58 16-53 (262)
84 3umg_A Haloacid dehalogenase; 33.2 14 0.00048 23.2 0.9 27 19-45 18-44 (254)
85 3mpo_A Predicted hydrolase of 32.5 19 0.00065 23.6 1.6 28 19-46 8-35 (279)
86 2hcf_A Hydrolase, haloacid deh 32.0 26 0.00088 21.7 2.1 27 19-45 7-33 (234)
87 3umc_A Haloacid dehalogenase; 31.9 15 0.00052 23.2 0.9 27 19-45 25-51 (254)
88 2rqp_A Heterochromatin protein 31.8 28 0.00097 20.3 2.1 17 30-46 8-24 (88)
89 3qnm_A Haloacid dehalogenase-l 31.8 15 0.00052 22.8 0.9 28 18-45 7-34 (240)
90 2je6_B RRP41, exosome complex 31.7 1.1E+02 0.0037 20.6 5.4 39 34-72 105-151 (250)
91 3ed5_A YFNB; APC60080, bacillu 31.6 15 0.00053 22.8 0.9 28 18-45 9-36 (238)
92 3kbb_A Phosphorylated carbohyd 31.6 23 0.0008 22.0 1.8 24 22-45 7-30 (216)
93 3uue_A LIP1, secretory lipase 31.1 45 0.0015 23.1 3.4 35 37-75 123-160 (279)
94 1dj0_A Pseudouridine synthase 31.1 44 0.0015 23.4 3.3 30 18-47 7-42 (264)
95 3e58_A Putative beta-phosphogl 30.9 17 0.00059 22.0 1.0 27 19-45 8-34 (214)
96 3ddh_A Putative haloacid dehal 30.7 18 0.00063 22.2 1.2 28 19-46 11-38 (234)
97 2hdo_A Phosphoglycolate phosph 30.3 17 0.0006 22.4 1.0 27 19-45 7-33 (209)
98 2fi1_A Hydrolase, haloacid deh 30.3 15 0.0005 22.2 0.6 27 19-45 9-35 (190)
99 2wf7_A Beta-PGM, beta-phosphog 30.1 16 0.00055 22.4 0.8 26 20-45 6-31 (221)
100 1ghc_A GH1; chromosomal protei 30.0 28 0.00095 19.6 1.8 17 30-46 2-18 (75)
101 3dwl_A Actin-related protein 3 29.7 38 0.0013 25.0 2.9 43 29-71 337-397 (427)
102 1tia_A Lipase; hydrolase(carbo 29.6 53 0.0018 22.5 3.5 35 37-75 122-159 (279)
103 3fzq_A Putative hydrolase; YP_ 29.4 23 0.00078 23.0 1.5 28 19-46 8-35 (274)
104 3vyw_A MNMC2; tRNA wobble urid 29.0 58 0.002 23.5 3.7 30 31-60 24-55 (308)
105 4dw8_A Haloacid dehalogenase-l 28.9 24 0.00081 23.1 1.5 38 19-57 8-45 (279)
106 3on2_A Probable transcriptiona 28.8 28 0.00097 20.9 1.8 22 25-46 47-68 (199)
107 1hst_A Histone H5; chromosomal 28.4 27 0.00094 20.7 1.6 17 30-46 6-22 (90)
108 4ex6_A ALNB; modified rossman 28.3 20 0.00068 22.4 1.0 28 19-46 22-49 (237)
109 3dnp_A Stress response protein 28.2 25 0.00085 23.2 1.5 38 19-57 9-46 (290)
110 3mc1_A Predicted phosphatase, 28.0 19 0.00065 22.3 0.9 28 19-46 7-34 (226)
111 1wfg_A Regulating synaptic mem 27.9 63 0.0021 19.6 3.3 45 15-61 85-129 (131)
112 1uss_A Histone H1; DNA binding 27.8 32 0.0011 20.2 1.8 17 30-46 6-22 (88)
113 1uwc_A Feruloyl esterase A; hy 27.5 60 0.002 22.1 3.4 37 35-75 108-147 (261)
114 3vay_A HAD-superfamily hydrola 27.4 24 0.00083 21.9 1.3 26 20-45 6-31 (230)
115 3qxg_A Inorganic pyrophosphata 27.1 21 0.00073 22.6 1.0 27 19-45 27-53 (243)
116 2kl1_A YLBL protein; structure 26.5 93 0.0032 17.5 4.5 40 16-59 24-63 (94)
117 4g9i_A Hydrogenase maturation 26.1 28 0.00097 28.1 1.7 49 19-72 707-761 (772)
118 2fdr_A Conserved hypothetical 26.1 23 0.00079 21.9 1.0 27 19-45 7-33 (229)
119 3nas_A Beta-PGM, beta-phosphog 26.1 21 0.0007 22.3 0.8 26 20-45 6-31 (233)
120 2fd5_A Transcriptional regulat 26.0 36 0.0012 20.4 1.9 22 25-46 42-63 (180)
121 4e1p_A Protein LSR2; anti-para 25.9 82 0.0028 17.6 3.3 16 18-33 22-37 (61)
122 2pke_A Haloacid delahogenase-l 25.6 27 0.00093 22.3 1.3 29 18-46 15-43 (251)
123 1oys_A Ribonuclease PH; transf 25.5 1.5E+02 0.0053 19.7 5.7 35 37-71 93-135 (245)
124 2hi0_A Putative phosphoglycola 25.4 26 0.00087 22.4 1.2 27 19-45 7-33 (240)
125 2wnr_B Probable exosome comple 25.2 1.5E+02 0.0053 19.7 5.3 39 34-72 101-147 (240)
126 1xhk_A Putative protease LA ho 25.2 1.4E+02 0.0048 19.4 4.9 28 48-75 79-111 (187)
127 2nn6_F MTR3, exosome component 25.0 1.5E+02 0.0051 20.2 5.2 20 53-72 149-168 (272)
128 2hsz_A Novel predicted phospha 24.9 26 0.0009 22.5 1.2 27 19-45 26-52 (243)
129 3smv_A S-(-)-azetidine-2-carbo 24.9 20 0.00069 22.1 0.6 27 19-45 9-35 (240)
130 3dv9_A Beta-phosphoglucomutase 24.9 25 0.00086 22.0 1.0 27 19-45 26-52 (247)
131 3ngm_A Extracellular lipase; s 24.8 75 0.0026 22.7 3.6 36 36-75 120-158 (319)
132 3dao_A Putative phosphatse; st 24.7 30 0.001 23.0 1.5 28 19-46 24-52 (283)
133 2p11_A Hypothetical protein; p 24.4 27 0.00091 22.3 1.1 27 19-45 14-40 (231)
134 1wr8_A Phosphoglycolate phosph 24.4 19 0.00066 23.3 0.4 28 19-46 6-33 (231)
135 1zbs_A Hypothetical protein PG 24.4 51 0.0017 22.4 2.6 46 18-70 235-280 (291)
136 2jil_A GRIP1 protein, glutamat 24.1 93 0.0032 17.2 3.4 41 16-60 53-93 (97)
137 2rd5_A Acetylglutamate kinase- 23.9 1.2E+02 0.0042 20.9 4.6 45 17-63 37-82 (298)
138 2hoq_A Putative HAD-hydrolase 23.7 26 0.00089 22.2 0.9 26 20-45 6-31 (241)
139 3kkd_A Transcriptional regulat 23.6 45 0.0016 21.0 2.1 22 25-46 70-91 (237)
140 3s6j_A Hydrolase, haloacid deh 23.6 32 0.0011 21.2 1.3 27 19-45 9-35 (233)
141 3sd7_A Putative phosphatase; s 23.6 29 0.001 21.8 1.2 27 19-45 32-58 (240)
142 2zg6_A Putative uncharacterize 23.5 35 0.0012 21.4 1.5 27 19-45 6-32 (220)
143 2aya_A DNA polymerase III subu 23.5 1.3E+02 0.0045 18.4 4.2 29 31-59 68-97 (128)
144 3m7n_D Probable exosome comple 23.5 1.6E+02 0.0053 20.2 5.0 39 34-72 101-147 (258)
145 3l5k_A Protein GS1, haloacid d 23.3 23 0.00079 22.5 0.6 27 19-45 33-59 (250)
146 2nyv_A Pgpase, PGP, phosphogly 23.1 28 0.00096 22.0 1.0 26 20-45 7-32 (222)
147 2pkt_A PDZ and LIM domain prot 22.9 1E+02 0.0034 16.9 3.3 40 17-60 48-87 (91)
148 1nf2_A Phosphatase; structural 22.7 36 0.0012 22.5 1.5 39 20-60 6-44 (268)
149 1sbo_A Putative anti-sigma fac 22.6 99 0.0034 17.1 3.3 48 18-66 14-66 (110)
150 3qqa_A CMER; alpha-helical, he 22.4 44 0.0015 20.4 1.8 22 25-46 54-75 (216)
151 4eek_A Beta-phosphoglucomutase 22.4 32 0.0011 22.0 1.2 28 18-45 30-57 (259)
152 2kjp_A Uncharacterized protein 22.3 98 0.0034 17.5 3.3 39 17-59 21-59 (91)
153 1x3x_A Cytochrome B5; hemoprot 22.2 40 0.0014 19.2 1.5 20 10-29 11-30 (82)
154 2nn6_E Exosome complex exonucl 22.2 1.8E+02 0.0062 20.1 5.2 37 36-72 121-173 (305)
155 2nn6_B Exosome complex exonucl 22.1 1.8E+02 0.0063 19.4 5.3 39 34-72 103-149 (249)
156 1ust_A Histone H1; DNA binding 22.1 39 0.0013 20.1 1.5 17 30-46 6-22 (93)
157 3kzx_A HAD-superfamily hydrola 22.0 23 0.0008 22.1 0.4 28 19-46 28-56 (231)
158 2x36_A LON protease homolog, m 21.6 96 0.0033 20.8 3.5 28 48-75 85-117 (207)
159 2kyg_A CAMP-dependent protein 21.6 62 0.0021 16.9 2.1 19 28-46 9-27 (50)
160 3nrg_A TETR family transcripti 21.4 53 0.0018 20.0 2.1 22 25-46 48-69 (217)
161 3k1z_A Haloacid dehalogenase-l 21.4 55 0.0019 21.2 2.2 25 21-45 6-30 (263)
162 3lf5_A Cytochrome B5 reductase 21.3 42 0.0014 19.6 1.5 20 10-29 13-32 (88)
163 3l7y_A Putative uncharacterize 21.2 40 0.0014 22.7 1.5 28 19-46 40-68 (304)
164 3col_A Putative transcription 21.2 25 0.00085 21.1 0.4 22 25-46 45-66 (196)
165 1th8_B Anti-sigma F factor ant 21.2 1.2E+02 0.0041 17.0 4.3 48 18-66 13-65 (116)
166 2jwk_A Protein TOLR; periplasm 21.2 1E+02 0.0036 16.2 3.8 48 20-68 8-64 (74)
167 3ejx_A DAP epimerase, diaminop 21.0 3.7 0.00013 30.0 -4.0 12 60-71 254-265 (317)
168 2l97_A HTRA, putative serine p 20.9 1.5E+02 0.005 17.9 4.6 40 17-60 77-116 (134)
169 4hku_A LMO2814 protein, TETR t 20.8 43 0.0015 20.3 1.5 36 5-46 28-63 (178)
170 2bty_A Acetylglutamate kinase; 20.7 1.8E+02 0.0062 19.7 4.9 50 13-64 18-68 (282)
171 1hko_A Cytochrome B5; electron 20.7 50 0.0017 19.9 1.8 29 10-38 16-50 (104)
172 1lgy_A Lipase, triacylglycerol 20.7 94 0.0032 21.1 3.4 34 37-74 122-158 (269)
173 2kl0_A Putative thiamin biosyn 20.7 53 0.0018 18.4 1.8 48 4-59 14-64 (73)
174 1cyo_A Cytochrome B5; electron 20.6 43 0.0015 19.7 1.4 29 10-38 12-46 (93)
175 3nul_A Profilin I; cytoskeleto 20.5 15 0.00052 23.0 -0.7 16 19-34 23-38 (130)
176 1tib_A Lipase; hydrolase(carbo 20.4 1E+02 0.0036 20.8 3.6 35 37-75 123-160 (269)
177 2qko_A Possible transcriptiona 20.3 40 0.0014 20.9 1.3 23 25-47 63-85 (215)
178 4ehu_A Activator of 2-hydroxyi 20.2 71 0.0024 21.3 2.6 46 21-71 210-255 (276)
179 2pq0_A Hypothetical conserved 20.2 27 0.00092 22.7 0.5 28 19-46 6-33 (258)
180 3nuq_A Protein SSM1, putative 20.2 44 0.0015 21.8 1.5 28 19-46 60-87 (282)
181 2ibj_A Cytochrome B5, CYTB5; F 20.2 47 0.0016 19.1 1.5 20 10-29 14-33 (88)
182 3bpj_A Eukaryotic translation 20.1 48 0.0016 19.2 1.5 19 28-46 30-48 (80)
183 2b5d_X Alpha-amylase; (beta/al 20.1 77 0.0026 24.3 3.0 18 18-35 343-360 (528)
No 1
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=99.93 E-value=8.3e-27 Score=178.84 Aligned_cols=78 Identities=36% Similarity=0.654 Sum_probs=72.0
Q ss_pred CeehhhhhhhhhhhcCC------ceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhHH
Q psy15537 1 MTTAQGTAVLVRRIDRD------DITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKL 74 (80)
Q Consensus 1 ~L~aa~iaai~~~~~~~------~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~~ 74 (80)
+|+||+|+||++|++++ +++||||||||++||.|+++|++++++|+|+++|+|.+++||||+|||++||++++.
T Consensus 361 ~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v~~~~s~DGSg~GAAl~AA~a~~~ 440 (445)
T 3hm8_A 361 QLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRFSSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVACRL 440 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhHHHHHHHHHHHhCCCCcEEEEECCCCchHHHHHHHHHHHHH
Confidence 58999999999999642 589999999999999999999999999999999999999999999999999999998
Q ss_pred hhhh
Q psy15537 75 GAFQ 78 (80)
Q Consensus 75 ~~~~ 78 (80)
+.|+
T Consensus 441 ~~~~ 444 (445)
T 3hm8_A 441 AQLT 444 (445)
T ss_dssp HC--
T ss_pred Hhhc
Confidence 8876
No 2
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=99.91 E-value=8.8e-26 Score=174.04 Aligned_cols=79 Identities=34% Similarity=0.586 Sum_probs=69.7
Q ss_pred CeehhhhhhhhhhhcCCc------eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhHH
Q psy15537 1 MTTAQGTAVLVRRIDRDD------ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKL 74 (80)
Q Consensus 1 ~L~aa~iaai~~~~~~~~------~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~~ 74 (80)
+|+||+|+||++|++.++ ++||||||||++||.|+++|++++++|+|+++|+|.+++||||+|||++||++++.
T Consensus 385 ~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliAa~a~~~ 464 (470)
T 3f9m_A 385 HMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACKK 464 (470)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchHHHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHHHHHHHH
Confidence 589999999999998643 99999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhC
Q psy15537 75 GAFQS 79 (80)
Q Consensus 75 ~~~~~ 79 (80)
+.|.+
T Consensus 465 ~~~~~ 469 (470)
T 3f9m_A 465 ACMLG 469 (470)
T ss_dssp -----
T ss_pred HHhcC
Confidence 87653
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.89 E-value=4.7e-24 Score=164.74 Aligned_cols=77 Identities=26% Similarity=0.352 Sum_probs=72.1
Q ss_pred CeehhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCC-------CCceEEEEeCCcchHHHHHHHHHHhH
Q psy15537 1 MTTAQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-------NKTFRLLLAEDGSGKGAGLASAIALK 73 (80)
Q Consensus 1 ~L~aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~-------~~~v~~~~a~DGSg~GAAl~aA~a~~ 73 (80)
+|+|++|++|+++++++.++||||||||++||.|+++|+++++++++ +++|+|.+++||||+|||++||++++
T Consensus 393 ~L~Aa~iaail~~~~~~~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~ 472 (485)
T 3o8m_A 393 RLTVCGVSAICDKRGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQK 472 (485)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEESHHHHHSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEecChhccCccHHHHHHHHHHHHhccccccCCCceEEEEEcCCChHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999996 47899999999999999999999988
Q ss_pred Hhhh
Q psy15537 74 LGAF 77 (80)
Q Consensus 74 ~~~~ 77 (80)
..++
T Consensus 473 ~~~~ 476 (485)
T 3o8m_A 473 RLAA 476 (485)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6554
No 4
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.82 E-value=1.3e-20 Score=144.18 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=71.8
Q ss_pred CeehhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC-C------CCceEEEEeCCcchHHHHHHHHHHhH
Q psy15537 1 MTTAQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P------NKTFRLLLAEDGSGKGAGLASAIALK 73 (80)
Q Consensus 1 ~L~aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~------~~~v~~~~a~DGSg~GAAl~aA~a~~ 73 (80)
+|+|++|++|++++++++.+|+||||| ++||.|+++|++++++|+ + +++|+|.+++||||+|||++||++.+
T Consensus 367 ~l~A~~iaai~~~~~~~~~~V~vdGsv-~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~ 445 (457)
T 2yhx_A 367 RLVVCXIXAICQKKGYSSGHIAAXGSX-RSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASA 445 (457)
T ss_dssp HHHTHHHHHHHHHHTCSSEEEEEESTT-TTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEECCc-ccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhh
Confidence 478999999999999888999999999 999999999999999998 3 46899999999999999999999999
Q ss_pred Hhhhh
Q psy15537 74 LGAFQ 78 (80)
Q Consensus 74 ~~~~~ 78 (80)
...|+
T Consensus 446 ~~~~~ 450 (457)
T 2yhx_A 446 XXSXA 450 (457)
T ss_dssp HHHTT
T ss_pred hhhhh
Confidence 87765
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.77 E-value=1.4e-19 Score=147.17 Aligned_cols=78 Identities=36% Similarity=0.659 Sum_probs=70.6
Q ss_pred CeehhhhhhhhhhhcCC------ceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhHH
Q psy15537 1 MTTAQGTAVLVRRIDRD------DITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKL 74 (80)
Q Consensus 1 ~L~aa~iaai~~~~~~~------~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~~ 74 (80)
+|+|++|++|+++++++ +.+|+||||||++||.|+++|+++++++.|+++|+|.+++||||+|||++||++.+.
T Consensus 832 ~l~a~~iaai~~~~~~~~~~~~~~~~V~vdGsv~~~~p~f~~~~~~~l~~l~~~~~v~~~~~~dgsg~GAAl~aa~~~~~ 911 (917)
T 1cza_N 832 QLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGVRL 911 (917)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTHHHHHHHHHHHHSTTEEEEEEECSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCccceEEEECCHHHHcCcHHHHHHHHHHHHhCCCCceEEEEecCChHHHHHHHHHHHHHH
Confidence 47899999999999762 389999999999999999999999999998889999999999999999999999987
Q ss_pred hhhh
Q psy15537 75 GAFQ 78 (80)
Q Consensus 75 ~~~~ 78 (80)
+.+.
T Consensus 912 ~~~~ 915 (917)
T 1cza_N 912 RTEA 915 (917)
T ss_dssp HC--
T ss_pred Hhhc
Confidence 7654
No 6
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.68 E-value=1.5e-17 Score=126.91 Aligned_cols=74 Identities=41% Similarity=0.698 Sum_probs=67.3
Q ss_pred CeehhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC-CCCceEEEEeCCcchHHHHHHHHHHhHH
Q psy15537 1 MTTAQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PNKTFRLLLAEDGSGKGAGLASAIALKL 74 (80)
Q Consensus 1 ~L~aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~~~~v~~~~a~DGSg~GAAl~aA~a~~~ 74 (80)
+++|+++++|++++++++++|++|||||++||.|++++++++++++ |..+|++.+++|||++|||++|+++.+.
T Consensus 376 ~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~dgs~iGAAllA~~~~~~ 450 (451)
T 1bdg_A 376 YLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSEDGSGKGAAAIAASCTRQ 450 (451)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTTHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCCccHHHHHHHHHHHhhc
Confidence 3689999999999999889999999999999999999999999998 7789999999999999999999987653
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.59 E-value=6.4e-16 Score=125.70 Aligned_cols=78 Identities=37% Similarity=0.640 Sum_probs=70.5
Q ss_pred Ceehhhhhhhhhhh--cC----CceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhHH
Q psy15537 1 MTTAQGTAVLVRRI--DR----DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALKL 74 (80)
Q Consensus 1 ~L~aa~iaai~~~~--~~----~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~~ 74 (80)
++.|++|++|+.++ ++ .+.+|++|||||++||.|.+.+++++++++++.+++|.+++|||++|||++||++.+.
T Consensus 384 ~llA~gia~ii~~l~~dp~~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~~~~~i~~a~dgs~~GAA~laa~~~~l 463 (917)
T 1cza_N 384 NLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGKGAAMVTAVAYRL 463 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTTEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCcccCcceEEEECCchhhccHHHHHHHHHHHHHhcCCCceEEEEeccchHHHHHHHHHhHhhh
Confidence 36799999999999 44 2389999999999999999999999999998788999999999999999999999887
Q ss_pred hhhh
Q psy15537 75 GAFQ 78 (80)
Q Consensus 75 ~~~~ 78 (80)
..|+
T Consensus 464 ~kq~ 467 (917)
T 1cza_N 464 AEQH 467 (917)
T ss_dssp HHHH
T ss_pred hhcc
Confidence 7664
No 8
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=94.97 E-value=0.088 Score=37.06 Aligned_cols=66 Identities=20% Similarity=0.182 Sum_probs=47.9
Q ss_pred hhhhhhhhhhhcCC------ceEEeEeCceeeeCccHHHHHHHHHHhhC--C----CCceEEEEeCCcchHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRD------DITIAVDGSLYKYHPRLKHWLQKYIQLLV--P----NKTFRLLLAEDGSGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~------~~~IavDGsvye~~p~f~~~l~~~l~~l~--~----~~~v~~~~a~DGSg~GAAl~aA 69 (80)
+.+++.++..++++ ...|-+.|++.+..|.|.+.+++.+++.. + ..+|.+....+..-+|||..+.
T Consensus 246 a~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~a~~~GAa~la~ 323 (347)
T 2ch5_A 246 GRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLGA 323 (347)
T ss_dssp HHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESSCTHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCCChHHHHHHHHH
Confidence 45666677777654 14788999999999999999999998874 2 2456666666655679987764
No 9
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=92.80 E-value=0.13 Score=35.73 Aligned_cols=63 Identities=21% Similarity=0.249 Sum_probs=45.1
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCCC---CceEEEEeCC---cchHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPN---KTFRLLLAED---GSGKGAGLAS 68 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~---~~v~~~~a~D---GSg~GAAl~a 68 (80)
+.+++.++..++++ .|-+.|++.+..|.|.+.+++.+++..+. .++.+..++- ..-+|||..+
T Consensus 251 ~~~i~~l~~~l~p~--~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 251 GLATGNLGNTLNPD--SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp HHHHHHHHHHHCCS--EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCC--EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHH
Confidence 45566777777754 58889999999999999999999887631 3456666544 4556777654
No 10
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=92.02 E-value=0.33 Score=35.04 Aligned_cols=64 Identities=9% Similarity=0.127 Sum_probs=45.5
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCC-CCceEEEEeC---CcchHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP-NKTFRLLLAE---DGSGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~-~~~v~~~~a~---DGSg~GAAl~aA 69 (80)
+.+++.++..++++. |-+.|++.+..|.|.+.+++.+++..+ ...+.+..++ |..-+|||..+.
T Consensus 303 a~~i~~l~~~ldP~~--IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 303 SIGLLNLIHLFGISK--IVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp HHHHHHHHHHHCCCE--EEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCE--EEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 455667777777543 667899998889999999999988762 2445565554 446788887653
No 11
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=91.20 E-value=0.31 Score=34.30 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=45.3
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCC---CCceEEEEeCCc---chHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP---NKTFRLLLAEDG---SGKGAGLAS 68 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~---~~~v~~~~a~DG---Sg~GAAl~a 68 (80)
+.+++.++.-++++ .|-+.|++.+..|.|.+.+++.+++... ..++.+..++-| .-+|||..+
T Consensus 249 a~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 249 GESLVNIVRVMDLN--NILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHCCC--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC--EEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 34566666666653 4667799998889999999999998873 246777877755 456777654
No 12
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=90.28 E-value=0.39 Score=33.16 Aligned_cols=59 Identities=15% Similarity=0.270 Sum_probs=40.3
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA 69 (80)
+.+++.++..++++ .|-+.|++.+. |.|.+.+++.+++. +|..-..++..-+|||..+.
T Consensus 228 a~~i~~l~~~l~p~--~IvlgGgv~~~-~~~~~~l~~~~~~~----~i~~~~~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 228 ASQAVYLARKIGTN--KVYLKGGMFRS-NIYHKFFTLYLEKE----GIISDLGKRSPEIGAVILAY 286 (299)
T ss_dssp HHHHHHHHHHHTCS--EEEEESGGGGS-HHHHHHHHHHHHHT----TCEEECCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEECCccCc-HHHHHHHHHHCCCC----eEeccCCCCChHHHHHHHHH
Confidence 34566666666654 47788999988 88988888888765 34332222666779887664
No 13
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=88.84 E-value=0.58 Score=35.83 Aligned_cols=50 Identities=14% Similarity=0.194 Sum_probs=40.6
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhH
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 73 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~ 73 (80)
-.|-++|+.-+++|.+.+++-+.+ +.+|......+++.+|||++|+++..
T Consensus 441 ~~i~~~GGga~ks~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 441 HELYACGGLPQKNHLLMQIFADVT-----NREIKVAASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp EEEEEESSHHHHCHHHHHHHHHHH-----TSCEEEBCCSSHHHHHHHHHHHHHHC
T ss_pred CEEEEEcCchhhCHHHHHHHHHHH-----CCeeEecCCCccHHHHHHHHHHHhcC
Confidence 468899998768899888888776 34677666788999999999998753
No 14
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=88.83 E-value=0.92 Score=34.54 Aligned_cols=48 Identities=13% Similarity=0.064 Sum_probs=38.2
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+. -++|.+.+++-+.+ +.+|......+++.+|||++|+++.
T Consensus 444 ~~i~~~GG~-aks~~~~Qi~ADv~-----g~pV~~~~~~e~~alGAA~lA~~a~ 491 (554)
T 3l0q_A 444 DTMMASGGG-TKNPIFVQEHANAT-----GCAMLLPEESEAMLLGSAMMGTVAA 491 (554)
T ss_dssp CEEEEESGG-GGCHHHHHHHHHHH-----CCEEEEESCSCHHHHHHHHHHHHHT
T ss_pred CEEEEeCcc-ccCHHHHHHHHHhh-----CCeEEecCCCcchHHHHHHHHHHHc
Confidence 458888986 47888888877666 4577777778999999999999864
No 15
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=88.75 E-value=1.3 Score=33.42 Aligned_cols=49 Identities=16% Similarity=0.085 Sum_probs=38.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhH
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 73 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~ 73 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++..
T Consensus 402 ~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 402 QRFFASDGGT-RSRVWMGIMADVL-----QRPVQLLANPLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp CEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEEECCSTHHHHHHHHHHHHTC
T ss_pred CEEEEeCCcc-cCHHHHHHHHHHh-----CCeEEecCCCCchHHHHHHHHHHHhC
Confidence 4588888865 7888888777666 45788778889999999999998743
No 16
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=88.39 E-value=2 Score=30.13 Aligned_cols=61 Identities=20% Similarity=0.145 Sum_probs=43.5
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCC----CCceEEEEeCCcc---hHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP----NKTFRLLLAEDGS---GKGAGL 66 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~----~~~v~~~~a~DGS---g~GAAl 66 (80)
+.+++.++..++++ .|-+.|++.+..|.|.+.+++.+++..+ ..++.+..++-|. -+|||.
T Consensus 241 a~~i~~l~~~l~p~--~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~ 308 (321)
T 3vgl_A 241 GAGLADLASLFDPS--AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAAD 308 (321)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHH
Confidence 45566677777654 4667899999999999999999988763 2456777776554 345543
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=87.68 E-value=1.3 Score=33.65 Aligned_cols=49 Identities=12% Similarity=0.056 Sum_probs=39.0
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhH
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 73 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~ 73 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++..
T Consensus 426 ~~i~~~GGga-ks~~~~Qi~ADvl-----g~pV~~~~~~e~~alGAA~lA~~a~G 474 (515)
T 3i8b_A 426 TRILLIGGGA-KSEAIRTLAPSIL-----GMDVTRPATDEYVAIGAARQAAWVLS 474 (515)
T ss_dssp CEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEECCCCHHHHHHHHHHHHHHH
T ss_pred CEEEEECchh-cCHHHHHHHHHHh-----CCceEecCCcccHHHHHHHHHHHHcC
Confidence 4588888865 7898888887666 34677777789999999999998754
No 18
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=87.40 E-value=1.3 Score=33.46 Aligned_cols=48 Identities=15% Similarity=0.190 Sum_probs=38.6
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|..-...+++.+|||++|+++.
T Consensus 404 ~~i~v~GGga-ks~~~~Qi~ADvl-----g~pV~~~~~~E~~alGAA~lA~~a~ 451 (526)
T 3ezw_A 404 HALRVDGGAV-ANNFLMQFQSDIL-----GTRVERPEVREVTALGAAYLAGLAV 451 (526)
T ss_dssp SEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHHT
T ss_pred CEEEEECchh-hCHHHHHHHHHHH-----CCEEEeCCCCchHHHHHHHHHHHHh
Confidence 4688888864 7888888777665 4578777788999999999999975
No 19
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=86.37 E-value=1.6 Score=32.92 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=38.1
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++.
T Consensus 395 ~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~ 442 (504)
T 3ll3_A 395 VAINATGGFL-KSDFVRQLCANIF-----NVPIVTMKEQQSGTLAAMFLARQAL 442 (504)
T ss_dssp SEEEEESGGG-CSHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHT
T ss_pred CEEEEeCchh-cCHHHHHHHHHhh-----CCeEEecCCCCchhHHHHHHHHHHc
Confidence 4588888865 7888888887666 4467776678899999999999874
No 20
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=85.55 E-value=1.9 Score=32.53 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=38.3
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhH
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 73 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~ 73 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|..-...+++.+|||++|+++..
T Consensus 403 ~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 403 HALRVDGGAV-ANNFLMQFQSDIL-----GTRVERPEVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp SEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHHHT
T ss_pred cEEEEeCchh-cCHHHHHHHHHHh-----CCceEecCCCCcHHHHHHHHHHHHhC
Confidence 4578888864 7888888777666 34677666788999999999998743
No 21
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=84.80 E-value=2 Score=29.35 Aligned_cols=63 Identities=22% Similarity=0.204 Sum_probs=41.4
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCC---C--CceEEEEe---CCcchHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP---N--KTFRLLLA---EDGSGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~---~--~~v~~~~a---~DGSg~GAAl~aA 69 (80)
+.+++.++..++++ .|-+.|++. ..|.|.+.+++.+++..+ . .++.+..+ +|..-+|||..+.
T Consensus 216 ~~~i~~l~~~l~p~--~IvlgG~i~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~ 286 (292)
T 2gup_A 216 AQGLLNIQYLIDPG--VISLGGSIS-QNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWL 286 (292)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGG-GCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEeCccc-cchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHH
Confidence 34556666666654 467889996 478899999999987652 1 33455554 4455678876543
No 22
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=84.69 E-value=1.6 Score=32.77 Aligned_cols=48 Identities=15% Similarity=0.257 Sum_probs=38.2
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++.
T Consensus 406 ~~i~~~GG~a-ks~~~~Qi~Adv~-----g~pV~~~~~~e~~alGaA~la~~a~ 453 (501)
T 3g25_A 406 QSLRVDGGAV-KNNFIMQFQADIV-----NTSVERPEIQETTALGAAFLAGLAV 453 (501)
T ss_dssp SEEEEESGGG-GCHHHHHHHHHHH-----TSEEEEESCCCHHHHHHHHHHHHHT
T ss_pred cEEEEecchh-cCHHHHHHHHHHh-----CCceEecCCCcchHHHHHHHHHHHh
Confidence 4588888864 8888888887666 4567777778999999999999874
No 23
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=84.65 E-value=2.3 Score=31.84 Aligned_cols=48 Identities=19% Similarity=0.247 Sum_probs=37.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++.
T Consensus 405 ~~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~alGaA~lA~~~~ 452 (504)
T 2d4w_A 405 TELRVDGGMV-ANELLMQFQADQL-----GVDVVRPKVAETTALGAAYAAGIAV 452 (504)
T ss_dssp CEEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHH
T ss_pred ceEEEeCCcc-cCHHHHHHHHHHh-----CCeEEeCCCCcchHHHHHHHHHhhc
Confidence 4578888876 7888888777666 4567777778899999999999874
No 24
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=84.19 E-value=1.1 Score=30.58 Aligned_cols=62 Identities=23% Similarity=0.187 Sum_probs=41.7
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeC---CcchHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAE---DGSGKGAGLAS 68 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~---DGSg~GAAl~a 68 (80)
+.+++.++..++++ .|-+.|++. ..|.|.+.+++.+++..+...+.+..++ |..-+|||..+
T Consensus 222 ~~~i~~l~~~l~p~--~ivlgG~~~-~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 222 ARLIADIKATTDCQ--CVVVGGSVG-LAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHCCS--EEEEEHHHH-TSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEeCccc-ccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 34566666666654 377889998 7899999999999876421244555544 44567887654
No 25
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=84.12 E-value=1.5 Score=33.17 Aligned_cols=47 Identities=11% Similarity=0.136 Sum_probs=37.4
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++.
T Consensus 428 ~i~~~GGga-ks~~~~Qi~ADvl-----g~pV~~~~~~e~~alGAA~lA~~a~ 474 (520)
T 4e1j_A 428 VLRVDGGMV-ASDWTMQRLSDLL-----DAPVDRPVILETTALGVAWLAGSRA 474 (520)
T ss_dssp CEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCCCHHHHHHHHHHHHHH
T ss_pred eEEEeCccc-cCHHHHHHHHHHh-----CCeEEecCCCccHHHHHHHHHHHHc
Confidence 477888864 7888888877666 4467776678899999999999874
No 26
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=83.58 E-value=1.9 Score=31.54 Aligned_cols=63 Identities=11% Similarity=0.208 Sum_probs=45.0
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC-CC--CceEEEEe---CCcchHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PN--KTFRLLLA---EDGSGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~~--~~v~~~~a---~DGSg~GAAl~aA 69 (80)
+.+++.++.-++++ .|-+.|++.+..|.|.+.+++.+++.. |. ..+.+..+ +| .-+|||..+.
T Consensus 346 ~~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 346 GAAIAIVINLFNPE--KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 44566667766654 477889999988999999999998874 31 24555554 55 7889887653
No 27
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=82.68 E-value=1.8 Score=32.86 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=37.2
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHhH
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIALK 73 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~~ 73 (80)
.|-++|+.- ++|.+.+++-+.+ +.+|......+++.+|||++|+++..
T Consensus 437 ~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 437 KILATGGAS-HNREILQVLADVF-----DAPVYVIDTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp CEEEEEGGG-GCHHHHHHHHHHH-----TSCEEECCCTTHHHHHHHHHHHHHHH
T ss_pred eEEEEcchh-cCHHHHHHHHHHh-----CCceEecCCCCchHHHHHHHHHHHhC
Confidence 477777765 7888888877666 34676666788999999999998753
No 28
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=82.65 E-value=2.7 Score=31.40 Aligned_cols=48 Identities=10% Similarity=0.159 Sum_probs=37.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++.+.+ +.+|......+++.+|||++|+++.
T Consensus 400 ~~i~~~GG~a-~n~~~~q~~Adv~-----g~pV~~~~~~e~~alGaA~la~~a~ 447 (495)
T 2dpn_A 400 KVLKADGGMA-QNRLFLKIQADLL-----GVPVAVPEVTETTALGAALMAGVGA 447 (495)
T ss_dssp CCEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHH
T ss_pred cEEEEecccc-cCHHHHHHHHHHh-----CCeeEecCCcccHHHHHHHHHHhhc
Confidence 3478888865 7888888877766 3567766677899999999998874
No 29
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=82.56 E-value=0.79 Score=34.66 Aligned_cols=57 Identities=14% Similarity=-0.013 Sum_probs=42.5
Q ss_pred hhhhhhhcCCceEEeEeCceeeeCccHHHHHHHH-HHhhCCCCceEEEEeCCcchHHHHHHHHHH
Q psy15537 8 AVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKY-IQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (80)
Q Consensus 8 aai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~-l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a 71 (80)
.-++..|... -.|-++|+. -++|.+.+++-+. + +.+|.....++++.+|||++|+++
T Consensus 379 r~~l~~~~~~-~~i~~~GG~-a~s~~w~Qi~ADv~~-----g~pV~~~~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 379 DTALDLIGST-GRILVEGRF-AEADVFVRALASLRP-----DCAVYTANAHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHHTTCC-SEEEEESGG-GGCHHHHHHHHHHST-----TSEEEEESSCCCTTGGGHHHHCTT
T ss_pred HHHHHHhcCC-CeEEEeCCc-ccCHHHHHHHhhhcC-----CCeEEEcCCCchHHHHHHHHhCcc
Confidence 3345555543 468888886 4788888887765 5 457777778899999999999876
No 30
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=82.40 E-value=3.3 Score=30.78 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=36.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCc-chHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG-SGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DG-Sg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++.+.+ +.+|.....++. +.+|||++|+++.
T Consensus 388 ~~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~~alGAA~lA~~~~ 436 (484)
T 2itm_A 388 QSVTLIGGGA-RSEYWRQMLADIS-----GQQLDYRTGGDVGPALGAARLAQIAA 436 (484)
T ss_dssp SCEEEESGGG-CCHHHHHHHHHHH-----CCCEEEESCTTSCHHHHHHHHHHHHH
T ss_pred ceEEEEeccc-cCHHHHHHHHHHh-----CCeEEeCCCCCcccHHHHHHHHHHHc
Confidence 3477888875 7788888777666 457777777774 8999999999874
No 31
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=82.27 E-value=1.7 Score=32.61 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=37.5
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|..-...+++.+|||++|+++.
T Consensus 405 ~~i~~~GGga-~s~~~~Qi~ADv~-----g~pV~~~~~~e~~alGaA~lA~~a~ 452 (506)
T 3h3n_X 405 PLLKVDGGAA-KNDLLMQFQADIL-----DIDVQRAANLETTALGAAYLAGLAV 452 (506)
T ss_dssp CEEEEESGGG-GCHHHHHHHHHHH-----TSEEEECSSSCHHHHHHHHHHHHHT
T ss_pred CEEEEecccc-cCHHHHHHHHHHh-----CCeEEecCCCcchhHHHHHHHHHHh
Confidence 4588888865 7888888887666 3467666678899999999999874
No 32
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=82.21 E-value=2 Score=30.27 Aligned_cols=61 Identities=18% Similarity=0.259 Sum_probs=41.2
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC-C-CCceEEEEeCCc---chHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P-NKTFRLLLAEDG---SGKGAGLA 67 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~-~~~v~~~~a~DG---Sg~GAAl~ 67 (80)
+.+++.++.-++++ .|-+.|++.+. +.|.+.+++.+++.+ + ..++.+..++-| .-+|||..
T Consensus 258 a~~i~~l~~~l~p~--~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l 323 (327)
T 4db3_A 258 AICFGNIFTANDPH--VVALGGGLSNF-ELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFL 323 (327)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGC-THHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHhCCC--EEEEeCcccch-HHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHH
Confidence 44566666766654 46667998875 678888999988876 3 246777777654 44666643
No 33
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=81.99 E-value=2.7 Score=31.42 Aligned_cols=48 Identities=13% Similarity=0.239 Sum_probs=37.8
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+.- ++|.+.+++.+.+ +.+|......+++.+|||++|+++.
T Consensus 409 ~~i~~~GG~a-~s~~~~Q~~Adv~-----g~pV~~~~~~e~~alGaA~la~~~~ 456 (503)
T 2w40_A 409 HVLRCDGGMT-KNKPFMQFNSDII-----NTKIEVSKYKEVTSLGAAVLAGLEV 456 (503)
T ss_dssp SCEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHT
T ss_pred ceEEEeCccc-cCHHHHHHHHHHH-----CCeEEecCCCcchHHHHHHHHHHHh
Confidence 3578888876 7888888877766 4567767777899999999999874
No 34
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=81.25 E-value=6.4 Score=27.51 Aligned_cols=62 Identities=18% Similarity=0.324 Sum_probs=42.7
Q ss_pred hhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC--C--CCceEEEEeCCc---chHHHHHHH
Q psy15537 5 QGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV--P--NKTFRLLLAEDG---SGKGAGLAS 68 (80)
Q Consensus 5 a~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~--~--~~~v~~~~a~DG---Sg~GAAl~a 68 (80)
.+++.++.-++++ .|-+.|++.+..+.|.+.+.+.+++.+ + ..++.+..++-| .-+|||..+
T Consensus 229 ~~la~l~~~~dP~--~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la 297 (310)
T 3htv_A 229 RAIATSINLFDPD--AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILA 297 (310)
T ss_dssp HHHHHHHHHHCCS--EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHhhCCC--EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHH
Confidence 3556666655554 466779999888888888888888776 2 346778877644 556666544
No 35
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=81.21 E-value=2.6 Score=30.33 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=44.0
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC-CC--CceEEEEe---CCcchHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PN--KTFRLLLA---EDGSGKGAGLAS 68 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~~--~~v~~~~a---~DGSg~GAAl~a 68 (80)
+.+++.++..++++ .|-+.|++.+..|.|.+.+++.+++.. +. .++.+..+ +|..-+|||++.
T Consensus 323 ~~~i~~l~~~ldP~--~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 323 GRILAIMVNLFNPQ--KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHhcCCC--EEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 44566666666654 367789999988999999999998874 21 34455544 456778997653
No 36
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=80.21 E-value=1.7 Score=32.80 Aligned_cols=48 Identities=15% Similarity=0.023 Sum_probs=37.2
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCce-EEEEeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTF-RLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v-~~~~a~DGSg~GAAl~aA~a~ 72 (80)
-.|-++|+. -++|.+.+++-+.+ +.+| ......+++.+|||++|+++.
T Consensus 404 ~~i~~~GGg-a~s~~~~Qi~ADv~-----g~pV~~~~~~~e~~alGaA~lA~~a~ 452 (511)
T 3hz6_A 404 GLLKVVGGG-ARSEAWLRMIADNL-----NVSLLVKPDAHLHPLRGLAALAAVEL 452 (511)
T ss_dssp CEEEEESGG-GGCHHHHHHHHHHH-----TCEEEECCCGGGHHHHHHHHHHHHHT
T ss_pred CEEEEeCch-hcCHHHHHHHHHHH-----CCeeEEecCCCCchHHHHHHHHHHHh
Confidence 357888887 57888888887766 3456 555578899999999999874
No 37
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=78.69 E-value=3.3 Score=30.91 Aligned_cols=47 Identities=17% Similarity=0.276 Sum_probs=36.5
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHHh
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a~ 72 (80)
.|-++|+.- ++|.+.+++-+.+ +.+|..-...+++.+|||++|+++.
T Consensus 396 ~i~~~GG~a-~s~~~~Qi~Adv~-----g~pV~~~~~~e~~alGaA~lA~~~~ 442 (497)
T 2zf5_O 396 ELRVDGGAT-ANDFLMQFQADIL-----NRKVIRPVVKETTALGAAYLAGLAV 442 (497)
T ss_dssp CEEEESGGG-GCHHHHHHHHHHH-----TSCEEEESCSCHHHHHHHHHHHHHT
T ss_pred eEEEeCccc-cCHHHHHHHHhhc-----CCeEEEcCCCcchHHHHHHHHHHHh
Confidence 477888776 7788888777666 4467766677899999999999875
No 38
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=77.58 E-value=2.1 Score=32.83 Aligned_cols=42 Identities=21% Similarity=0.359 Sum_probs=34.7
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEe------CCcchHHHHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLA------EDGSGKGAGLASAIA 71 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a------~DGSg~GAAl~aA~a 71 (80)
.+|+|.+||++-|+.++|..+|++... +..+.+|+++.|.+.
T Consensus 425 ~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilasl~ 472 (498)
T 3qb0_A 425 SIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTSLG 472 (498)
T ss_dssp GSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHTCH
T ss_pred CchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEecCc
Confidence 579999999999999999767777654 367899999998653
No 39
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=77.12 E-value=11 Score=26.00 Aligned_cols=62 Identities=16% Similarity=0.098 Sum_probs=41.2
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCc---chHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG---SGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DG---Sg~GAAl~aA 69 (80)
+.+++.++.-++++ .|-+.|++.+. |.|.+.+++.+++... ..+.+..++-| .-+|||..+.
T Consensus 226 a~~i~~l~~~~~p~--~IvlgGgi~~~-~~~~~~l~~~l~~~~~-~~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 226 CTGLYNLIYLFDPT--HIFIGGGITSR-PTFIAELKHHMESFGL-RDTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGS-TTHHHHHHHHHTTTCC-TTCEEEECSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEeCccccc-HHHHHHHHHHHHHhcc-CCCeEEECCcCChHHHHhHHHHHH
Confidence 34566666666654 46677999874 8899999998876543 34566666544 5567775543
No 40
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=76.07 E-value=1.2 Score=30.99 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=39.7
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCC--CCceEEEEeC---CcchHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVP--NKTFRLLLAE---DGSGKGAGLA 67 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~--~~~v~~~~a~---DGSg~GAAl~ 67 (80)
+.+++.++..++++ .|-+.|++.+..+.|.+ +++.+++.++ ...+.+..++ |..-+|||..
T Consensus 258 a~~i~~l~~~l~p~--~IvlgG~i~~~~~~~~~-l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~l 323 (327)
T 2ap1_A 258 AVCLGNILTIVDPD--LLVIGGGLSNFTAITTQ-LAERLPRHLLPVARAPRIERARHGDAGGMRGAAFL 323 (327)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGSTHHHHS-SGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHT
T ss_pred HHHHHHHHHHhCCC--EEEEeChhhcchhHHHH-HHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHH
Confidence 34566666666654 37788999987766665 7777776652 2356677655 4455677754
No 41
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=75.60 E-value=11 Score=26.10 Aligned_cols=64 Identities=19% Similarity=0.107 Sum_probs=43.1
Q ss_pred hhhhhhhhhhhcCCceEEeEeCcee-eeCccHHHHHHHHHHhhC-CCCceEEEEeCC---cchHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLY-KYHPRLKHWLQKYIQLLV-PNKTFRLLLAED---GSGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvy-e~~p~f~~~l~~~l~~l~-~~~~v~~~~a~D---GSg~GAAl~aA 69 (80)
+.+++.++.-++++ .|-+.|++. +..|.|.+.+++.+++.. +.....+..++- ..-+|||..+-
T Consensus 226 ~~~i~~l~~~~~p~--~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 226 GIGLASLVKAFDPG--VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp HHHHHHHHHHHCCS--EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC--EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 34556666666654 567789999 888999999999999876 322222555554 44567776553
No 42
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=73.83 E-value=7.4 Score=27.20 Aligned_cols=60 Identities=13% Similarity=0.219 Sum_probs=37.6
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC-C-CCceEEEEe--CCcchHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-P-NKTFRLLLA--EDGSGKGAGLAS 68 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~-~~~v~~~~a--~DGSg~GAAl~a 68 (80)
+.+++.++..++++ .|-+.|++. +.|.+.+++.+++.. + ...+.+..+ .|-.-+|||..+
T Consensus 273 a~~i~~l~~~l~P~--~IvlgG~i~---~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~~~GAa~l~ 336 (343)
T 2yhw_A 273 GLGVVNILHTMNPS--LVILSGVLA---SHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMV 336 (343)
T ss_dssp HHHHHHHHHHTCCS--EEEEESTTH---HHHHHHHHHHHHHHSCGGGTTCEEEECCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC--EEEEeCCcH---HHHHHHHHHHHHHhcccccCCcEEEEccCCCchHHHHHHHH
Confidence 34556666666654 466889986 568888888888765 2 234455555 343456766554
No 43
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=65.40 E-value=9.1 Score=28.25 Aligned_cols=46 Identities=9% Similarity=-0.087 Sum_probs=33.8
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHH
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a 71 (80)
-.|-++|+.- ++|.+.+++-+.+ +.+|.... .+++.+|||++|+++
T Consensus 395 ~~i~~~GGga-ks~~~~Qi~ADvl-----g~pV~~~~-~e~~alGaa~~A~~a 440 (489)
T 2uyt_A 395 SQLHIVGGGC-QNTLLNQLCADAC-----GIRVIAGP-VEASTLGNIGIQLMT 440 (489)
T ss_dssp SEEEEESGGG-GCHHHHHHHHHHH-----TSEEEECC-TTHHHHHHHHHHHHH
T ss_pred CEEEEeCChh-hhHHHHHHHHHHH-----CCeeecCC-ccHhHHHHHHHHHHH
Confidence 4577888876 7888888777766 34565433 789999998887765
No 44
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=62.96 E-value=18 Score=26.11 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=41.6
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcc---hHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGS---GKGAGLA 67 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGS---g~GAAl~ 67 (80)
+.+++.++.-+..+.-.|-+.|++.+..+.|.+.+.+.++++. ++.+..++.|. -+|||..
T Consensus 282 a~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~---~~~i~~~~~~~~a~~~GAa~l 345 (381)
T 1saz_A 282 AKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIA---PVLVFPGSNEEKALALSALRV 345 (381)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTS---CEEEEEBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhhc---CeEEEecCcchhHHHHHHHHH
Confidence 3455666666611223577889999987779999999998764 57777787763 3555544
No 45
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=57.86 E-value=12 Score=26.53 Aligned_cols=49 Identities=16% Similarity=0.329 Sum_probs=35.6
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhCCC-CceEEEEeC---CcchHHHHHHHHH
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPN-KTFRLLLAE---DGSGKGAGLASAI 70 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~~~-~~v~~~~a~---DGSg~GAAl~aA~ 70 (80)
.|=+-|+ -..|+|.+++++-+..+.|. .++.+.... ..+.+|+++.+.+
T Consensus 297 IvLtGG~--s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 297 NVMSGGT--TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp EEEESGG--GCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred cEeeCCC--CCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhCc
Confidence 3444454 45799999999999999875 456655443 4578899988874
No 46
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=53.16 E-value=22 Score=25.17 Aligned_cols=63 Identities=10% Similarity=-0.127 Sum_probs=38.5
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHH--HHHHHHHhhC-CC--------CceEEEEe---CCcchHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKH--WLQKYIQLLV-PN--------KTFRLLLA---EDGSGKGAGLAS 68 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~--~l~~~l~~l~-~~--------~~v~~~~a---~DGSg~GAAl~a 68 (80)
+.+++.++..++++ .|-+-|+...+.+.|.+ .+++.+++.+ +. .++.+..+ +|..-+|||..+
T Consensus 293 ~~~i~~l~~~l~p~--~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~ 369 (373)
T 2q2r_A 293 MRVGSEASMALLPL--TIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCG 369 (373)
T ss_dssp HHHHHHHHHHHCCS--EEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCC--EEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHH
Confidence 34566666666654 37787885445577777 7777776653 21 24555444 455667887654
No 47
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=50.99 E-value=16 Score=24.50 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=25.0
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
-||.|...+-+.+.+ .+..+.+.-.|||+|.+++|
T Consensus 62 dYPd~a~~va~~V~~----g~~d~GIliCGTGiG~sIaA 96 (166)
T 3s5p_A 62 DYPDFAKIGCEAVTS----GRADCCILVCGTGIGISIAA 96 (166)
T ss_dssp --CHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCcEEEEEcCCcHHHHHHh
Confidence 488888777777643 35566777789999999876
No 48
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=49.33 E-value=12 Score=26.80 Aligned_cols=50 Identities=14% Similarity=0.200 Sum_probs=35.5
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhC----------------CC-CceEEEEeC---CcchHHHHHHHHHH
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLV----------------PN-KTFRLLLAE---DGSGKGAGLASAIA 71 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~----------------~~-~~v~~~~a~---DGSg~GAAl~aA~a 71 (80)
.|=+-|| -..|+|++++++-+..++ |. .+|++.... -.+.+|+++.|.+.
T Consensus 319 IvL~GG~--s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~ 388 (418)
T 1k8k_A 319 IVLSGGS--TMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTP 388 (418)
T ss_dssp EEEESGG--GCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSH
T ss_pred eEEeCCc--cccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCc
Confidence 4445555 458999999999998885 32 356555444 47899999988753
No 49
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=48.95 E-value=9.3 Score=27.56 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=21.2
Q ss_pred EeEeCceeeeCccHHHHHHHHHHhhC-----------CC-CceEEEEe---CCcchHHHHHHHHHH
Q psy15537 21 IAVDGSLYKYHPRLKHWLQKYIQLLV-----------PN-KTFRLLLA---EDGSGKGAGLASAIA 71 (80)
Q Consensus 21 IavDGsvye~~p~f~~~l~~~l~~l~-----------~~-~~v~~~~a---~DGSg~GAAl~aA~a 71 (80)
|=+-|+ -..|+|.+++++-+..++ |. .+|++... ...+.+|+++.|.+.
T Consensus 302 vLtGG~--s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~ 365 (394)
T 1k8k_B 302 VLSGGS--TMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIM 365 (394)
T ss_dssp EEESGG--GCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC-----------------------
T ss_pred EEeCcc--cccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCc
Confidence 334444 457999999999999987 64 35655433 367888999888764
No 50
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=48.69 E-value=27 Score=24.27 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=36.4
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeee-CccHH-HHHHHHHHh------hCCCCceEEEEeCCcchHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKY-HPRLK-HWLQKYIQL------LVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~-~p~f~-~~l~~~l~~------l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
+.+++.++.-++++. -|-+-|++... .+.|. +.+.+.+++ .....+|.+...+|..-+|||..+
T Consensus 253 g~~i~~l~~~l~P~~-gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~ 324 (332)
T 1sz2_A 253 GRFGGNLALNLGTFG-GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHL 324 (332)
T ss_dssp HHHHHHHHHHHTCTT-EEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCe-EEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHH
Confidence 345666666666543 25577888775 33332 234444432 223445666655666778888664
No 51
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=48.30 E-value=17 Score=27.32 Aligned_cols=48 Identities=17% Similarity=0.259 Sum_probs=35.8
Q ss_pred EeEeCceeeeCccHHHHHHHHHHhhCCC------CceEEEEe------CCcchHHHHHHHHH
Q psy15537 21 IAVDGSLYKYHPRLKHWLQKYIQLLVPN------KTFRLLLA------EDGSGKGAGLASAI 70 (80)
Q Consensus 21 IavDGsvye~~p~f~~~l~~~l~~l~~~------~~v~~~~a------~DGSg~GAAl~aA~ 70 (80)
|=+-|+ -..|+|.++|++-|..++|. .+|++... .-.+.+|+++.|.+
T Consensus 505 vltGG~--s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL 564 (593)
T 4fo0_A 505 LVVGGG--LMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACL 564 (593)
T ss_dssp EEESST--TCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHC
T ss_pred EEEchh--hchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcC
Confidence 334444 46799999999999999974 35766644 24689999999875
No 52
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=47.41 E-value=9.3 Score=25.99 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=23.2
Q ss_pred CccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 31 HPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 31 ~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
||.|...+-+++.+ .+..+.+.-.|||+|.+++|
T Consensus 66 YPd~a~~vA~~V~~----g~~d~GIliCGTGiG~sIaA 99 (179)
T 3k7p_A 66 YPDFASRVAEMVAR----KEVEFGVLAAGSGIGMSIAA 99 (179)
T ss_dssp HHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHH
T ss_pred HHHHHHHHHHHHHc----CCCCEEEEEccCcHHHhhHh
Confidence 56666555555532 34566777789999999876
No 53
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=47.25 E-value=18 Score=24.78 Aligned_cols=46 Identities=13% Similarity=0.114 Sum_probs=30.7
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEE-eCCcchHHHHHHHHHH
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLL-AEDGSGKGAGLASAIA 71 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~-a~DGSg~GAAl~aA~a 71 (80)
.|-+.|++. ++|.+++.+.+.+. .+|.+-. .+....+|||+.|+-.
T Consensus 211 ~i~~~GG~a-~n~~~~~~~~~~lg-----~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 211 DVVMTGGVA-QNYGVRGALEEGLG-----VEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp SEEEESGGG-GCHHHHHHHHHHHC-----SCEECCGGGGGHHHHHHHHHHHHH
T ss_pred eEEEeCccc-cCHHHHHHHHHHHC-----CCeEeCCCcchHhHHHHHHHHHHh
Confidence 477888876 58889888887773 2333322 2234789999988654
No 54
>2po1_A Probable exosome complex exonuclease 1; RNAse PH, hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus abyssi} PDB: 2po0_A* 2pnz_A 2po2_A*
Probab=47.09 E-value=44 Score=22.64 Aligned_cols=39 Identities=15% Similarity=0.337 Sum_probs=26.2
Q ss_pred HHHHHHHHHHh-----hCCCCceEE---EEeCCcchHHHHHHHHHHh
Q psy15537 34 LKHWLQKYIQL-----LVPNKTFRL---LLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 34 f~~~l~~~l~~-----l~~~~~v~~---~~a~DGSg~GAAl~aA~a~ 72 (80)
....+.++++. ++|...|.+ +++.||+-.-|++.|+.+.
T Consensus 101 ~s~li~r~l~~~i~l~~~p~~~i~I~~~VL~~dG~~~~aai~aa~~A 147 (249)
T 2po1_A 101 ISKVIKGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLA 147 (249)
T ss_dssp HHHHHHHHHGGGBCGGGSTTEEEEEEEEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccHHHCCCCEEEEEEEEEecCCCHHHHHHHHHHHH
Confidence 34566677766 345534444 6889999988888887653
No 55
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=46.41 E-value=13 Score=24.68 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=25.4
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
-||.|...+-+.+.+ .+..+.+.=.|||+|.+++|
T Consensus 53 dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaA 87 (155)
T 1o1x_A 53 DYPDYAKKVVQSILS----NEADFGILLCGTGLGMSIAA 87 (155)
T ss_dssp CHHHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHc----CCCceEEEEcCCcHHHHHHh
Confidence 477777776666633 34566777889999999876
No 56
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=45.79 E-value=11 Score=25.77 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=25.8
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
-||.|...+-+.+.+ .+..+.+.-.|||+|.+++|
T Consensus 73 DYPd~a~~vA~~V~~----ge~d~GIliCGTGiG~sIaA 107 (184)
T 3sgw_A 73 AYPHVAIQAAQLIKD----GKVDRALMICGTGLGVAISA 107 (184)
T ss_dssp CHHHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCcEEEEEcCCcHHHhhhh
Confidence 577777777766643 34566777789999999876
No 57
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=45.06 E-value=11 Score=26.24 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=25.7
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
.||.|...+-+.+.+ ....+.+.-.|||.|.+++|
T Consensus 50 dYpd~a~~vA~~V~~----g~~d~GIliCGTGiG~siaA 84 (214)
T 3ono_A 50 TYIHLGIMASILLNS----KAVDFVVTGCGTGQGALMSC 84 (214)
T ss_dssp CHHHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCCEEEEEcCCcHHHHHHH
Confidence 477777777666643 34666777889999999876
No 58
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=44.62 E-value=13 Score=24.33 Aligned_cols=35 Identities=14% Similarity=0.066 Sum_probs=25.6
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
.||.|...+-+.+.+ .+..+.+.-.|||+|.+++|
T Consensus 42 dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaA 76 (149)
T 2vvr_A 42 DYPHYASQVALAVAG----GEVDGGILICGTGVGISIAA 76 (149)
T ss_dssp CHHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHc----CCCceEEEEeCCcHHHHHHH
Confidence 577777777766633 34566777789999999876
No 59
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=44.44 E-value=73 Score=21.99 Aligned_cols=63 Identities=13% Similarity=0.195 Sum_probs=40.0
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCCC----------CceEEEEeCCc---chHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPN----------KTFRLLLAEDG---SGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~----------~~v~~~~a~DG---Sg~GAAl~aA 69 (80)
+.+++.++.-++++. |-+.|++.+. |.|-+.+++.+++.+.. .+..+..++-| .-+|||..+-
T Consensus 213 a~~i~nl~~~ldPe~--IviGGgi~~~-~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 213 AQALAQYILILAPXX--IILGGGVMQQ-XQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp HHHHHHHHHHTCCSC--EEEESSGGGC-THHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCchh--hhcCchhhhh-HHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 456666777676654 5566988776 45888888888886521 12346656544 4567776553
No 60
>2eel_A Cell death activator CIDE-A; CIDE-N domain, cell death- inducing DFFA-like effector A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.67 E-value=31 Score=20.88 Aligned_cols=30 Identities=30% Similarity=0.431 Sum_probs=23.3
Q ss_pred cHHHHHHHHHHhhC-CCCceEEEEeCCcchH
Q psy15537 33 RLKHWLQKYIQLLV-PNKTFRLLLAEDGSGK 62 (80)
Q Consensus 33 ~f~~~l~~~l~~l~-~~~~v~~~~a~DGSg~ 62 (80)
.+++.++++...+. +...+++.+.+||.-+
T Consensus 29 sL~EL~~K~~~~l~l~~~~~~lvLeeDGT~V 59 (91)
T 2eel_A 29 SLQELISKTLDALVIATGLVTLVLEEDGTVV 59 (91)
T ss_dssp SHHHHHHHHHHHTTCSSSCEEEEETTTCCBC
T ss_pred CHHHHHHHHHHHhcCCCCCcEEEEeeCCcEE
Confidence 67888888776655 5668999999999753
No 61
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=43.62 E-value=14 Score=24.23 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=25.8
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
-||.|...+-+.+.+ .+..+.+.-.|||+|.+++|
T Consensus 41 dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaA 75 (149)
T 3he8_A 41 DYPDFGLKVAEAVKS----GECDRGIVICGTGLGISIAA 75 (149)
T ss_dssp CHHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCCEEEEEcCCcHHHHHHh
Confidence 478887777776643 34556777789999999876
No 62
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=43.57 E-value=12 Score=22.76 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=22.4
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
..=+||+++...+.+.+.+.+.++++-
T Consensus 5 ~fDlDGTL~~~~~~~~~~~~~~~~~~g 31 (216)
T 2pib_A 5 IFDMDGVLMDTEPLYFEAYRRVAESYG 31 (216)
T ss_dssp EEESBTTTBCCGGGHHHHHHHHHHHTT
T ss_pred EECCCCCCCCchHHHHHHHHHHHHHcC
Confidence 345799999999999999998887763
No 63
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=42.41 E-value=5.3 Score=26.37 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=25.2
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
.||.|...+-+.+. +..+.+.-.|||+|.+++|
T Consensus 49 dYpd~a~~va~~V~------~~d~GIliCGTGiG~siaA 81 (148)
T 4em8_A 49 DYPDYVHDVVREVS------DTSFGVLICGTGIGMSIAA 81 (148)
T ss_dssp CGGGGTHHHHTTCB------TTBEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHH------HhCeEEEEccCcHHHHHHH
Confidence 48888887776664 4556677789999999876
No 64
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=42.27 E-value=15 Score=24.48 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=25.8
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
.||.|...+-+.+.+ .+..+.+.-.|||+|.+++|
T Consensus 45 dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~siaA 79 (162)
T 2vvp_A 45 DYPAFCIAAATRTVA----DPGSLGIVLGGSGNGEQIAA 79 (162)
T ss_dssp CHHHHHHHHHHHHHH----STTCEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHc----CCCceEEEEeCCcHHHHHHH
Confidence 577777777776644 24566777789999999876
No 65
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=41.77 E-value=15 Score=24.61 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=24.1
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
-||.|...+-+.+.+ .+..+.+.-.|||+|.+++|
T Consensus 61 dYpd~a~~va~~V~~----g~~d~GIliCGTGiG~sIaA 95 (169)
T 3ph3_A 61 DYPDFGLKVAEAVKS----GECDRGIVICGTGLGISIAA 95 (169)
T ss_dssp CHHHHHHHHHHHHHT----TSSSEEEEEESSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHc----CCCCEEEEEcCCcHHHHHHh
Confidence 466666666655533 34556777789999999876
No 66
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=41.67 E-value=8.2 Score=26.49 Aligned_cols=44 Identities=14% Similarity=0.030 Sum_probs=31.0
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
...|.+-|++.+. |.+.+++.+++ |. +.+..++|..-+|||..+
T Consensus 233 p~~vvlgGGv~~~---l~~~l~~~l~~--~~--~~i~~~~~a~~~GAa~la 276 (291)
T 1zxo_A 233 QYPVHFIGSIAYC---YKEILQDAARQ--TG--IQIGKILQSPMEGLIQYH 276 (291)
T ss_dssp TSCEEECSHHHHH---THHHHHHHTTT--TT--CCEEEECSCTHHHHHTTS
T ss_pred CceEEEECcHHHH---HHHHHHHHHhc--CC--cEEeecCCCHHHHHHHHH
Confidence 3457788999876 77777777766 43 345566777778988764
No 67
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=41.04 E-value=15 Score=24.06 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=29.5
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcc
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGS 60 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGS 60 (80)
+..=+|||+....-.+.+...++|+++.. . +.+.++.+=+
T Consensus 9 i~~DlDGTLl~~~~~i~~~~~~al~~l~~-~-i~v~iaTGR~ 48 (246)
T 2amy_A 9 CLFDVDGTLTAPRQKITKEMDDFLQKLRQ-K-IKIGVVGGSD 48 (246)
T ss_dssp EEEESBTTTBCTTSCCCHHHHHHHHHHTT-T-SEEEEECSSC
T ss_pred EEEECCCCcCCCCcccCHHHHHHHHHHHh-C-CeEEEEcCCC
Confidence 45568999998776777888899988853 3 7777765443
No 68
>1rre_A ATP-dependent protease LA; catalytic Ser-Lys DYAD, hydrolase; HET: MSE; 1.75A {Escherichia coli} SCOP: d.14.1.10 PDB: 1rr9_A*
Probab=39.14 E-value=37 Score=22.71 Aligned_cols=29 Identities=17% Similarity=0.392 Sum_probs=22.7
Q ss_pred CCCceEEEEe-----CCcchHHHHHHHHHHhHHh
Q psy15537 47 PNKTFRLLLA-----EDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 47 ~~~~v~~~~a-----~DGSg~GAAl~aA~a~~~~ 75 (80)
|+.+|++.++ +||++.|.|++.|+.+...
T Consensus 76 ~~~di~vnl~~g~~~k~GpsadLaia~AilSa~~ 109 (200)
T 1rre_A 76 EKRDIHVHVPEGATPKDGPAAGIAMCTALVSCLT 109 (200)
T ss_dssp TSEEEEEECSSTTSCEESSTTHHHHHHHHHHHHH
T ss_pred CcceEEEEeCCccccCCCCcchHHHHHHHHHHcC
Confidence 3467888877 5999999999998876543
No 69
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=38.12 E-value=12 Score=22.49 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=22.1
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...+.++++
T Consensus 7 i~fDlDGTL~~~~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 7 FIWDLDGTLLDSYEAILSGIEETFAQF 33 (207)
T ss_dssp EEECTBTTTEECHHHHHHHHHHHHHHH
T ss_pred EEEeCCCcccccHHHHHHHHHHHHHHc
Confidence 445689999999888888888888776
No 70
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=38.04 E-value=26 Score=25.44 Aligned_cols=40 Identities=20% Similarity=0.158 Sum_probs=32.2
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+.+++.++.-+++ .|-+.|++.+..|.|.+.+++.+++.+
T Consensus 248 g~~i~nl~~~ldP---~IviGGgi~~~~~~~~~~l~~~l~~~~ 287 (366)
T 3mcp_A 248 GDALASAITLIDG---LIVIGGGLSGASKYILPVLLKEMNAQT 287 (366)
T ss_dssp HHHHHHHHHHHCS---EEEEESGGGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCC---EEEEEChhhhchHHHHHHHHHHHHHhc
Confidence 4456666666664 677889999999999999999999877
No 71
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=38.02 E-value=19 Score=25.04 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=25.7
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
.||.|...+-+.+.+ ....+.+.=.|||+|.+++|
T Consensus 51 DYPd~a~~vA~~V~~----g~~d~GIliCGTGiG~sIAA 85 (216)
T 2ppw_A 51 TYVQNGLMAAILLNT----KAVDFVVTGCGTGVGAMLAL 85 (216)
T ss_dssp CHHHHHHHHHHHHHT----TSCSEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHc----CCCCeEEEEcCCcHHHHHHh
Confidence 477777777666643 35567777889999999876
No 72
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=37.96 E-value=34 Score=24.11 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=22.0
Q ss_pred HHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHHhh
Q psy15537 37 WLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLGA 76 (80)
Q Consensus 37 ~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~~~ 76 (80)
.+.+.+++++ |+.+|.+. |-++|+|+++-.+.....
T Consensus 139 ~i~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~~ 177 (301)
T 3o0d_A 139 QIGPKLDSVIEQYPDYQIAVT----GHSLGGAAALLFGINLKV 177 (301)
T ss_dssp HHHHHHHHHHHHSTTSEEEEE----EETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceEEEe----ccChHHHHHHHHHHHHHh
Confidence 3444555555 45555554 778888888766655443
No 73
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=37.86 E-value=24 Score=24.87 Aligned_cols=35 Identities=14% Similarity=0.068 Sum_probs=26.6
Q ss_pred eCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHH
Q psy15537 30 YHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~a 68 (80)
-||.|...+-+.+.+ ....+.+.-.|||+|.+++|
T Consensus 67 DYPd~a~~vA~~V~~----g~~d~GIliCGTGiG~sIAA 101 (231)
T 3c5y_A 67 TYVMNGLLAGILLNS----GAADFVVTGCGTGMGSMLAA 101 (231)
T ss_dssp CHHHHHHHHHHHHHH----TSCSEEEEEESSSHHHHHHH
T ss_pred ChHHHHHHHHHHHHc----CCCCeEEEEcCCcHHHHHHH
Confidence 588888877777744 24566777789999999876
No 74
>1uhm_A Histone H1, histone HHO1P; winged helix-turn-helix, linker histone, riken structural genomics/proteomics initiative, RSGI; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Probab=36.76 E-value=22 Score=20.39 Aligned_cols=17 Identities=6% Similarity=0.032 Sum_probs=15.2
Q ss_pred eCccHHHHHHHHHHhhC
Q psy15537 30 YHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~ 46 (80)
.||.|.+++.++|..|-
T Consensus 3 ~hP~y~~MI~eAI~~lk 19 (78)
T 1uhm_A 3 SSKSYRELIIEGLTALK 19 (78)
T ss_dssp CCCCHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 48999999999999885
No 75
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=36.55 E-value=60 Score=18.49 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=27.5
Q ss_pred CceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcch
Q psy15537 17 DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSG 61 (80)
Q Consensus 17 ~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg 61 (80)
....++|||.-.... .+ +++.+....++..+.+...++|+|
T Consensus 23 GD~I~~ing~~v~~~---~d-~~~~l~~~~~~~~v~l~v~R~g~~ 63 (95)
T 3id1_A 23 GTELKAVDGIETPDW---DA-VRLQLVDKIGDESTTITVAPFGSD 63 (95)
T ss_dssp TCEEEEETTEECSSH---HH-HHHHHHHTTTCSEEEEEEECTTCC
T ss_pred CCEEEEECCEECCCH---HH-HHHHHHHhcCCCcEEEEEEECCCC
Confidence 468899999876543 32 344554444556788888888864
No 76
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=35.95 E-value=38 Score=23.32 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=20.6
Q ss_pred HHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHHh
Q psy15537 37 WLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 37 ~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~~ 75 (80)
.+.+.+++++ |+.+|.+. |-.+|+|+++-.+....
T Consensus 109 ~~~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~ 146 (258)
T 3g7n_A 109 TIITEVKALIAKYPDYTLEAV----GHSLGGALTSIAHVALA 146 (258)
T ss_dssp HHHHHHHHHHHHSTTCEEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEe----ccCHHHHHHHHHHHHHH
Confidence 3444555554 55555554 77788888765554433
No 77
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=35.79 E-value=18 Score=24.34 Aligned_cols=55 Identities=15% Similarity=0.074 Sum_probs=34.1
Q ss_pred hhhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEe---CCcchHHHHHHHH
Q psy15537 4 AQGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLA---EDGSGKGAGLASA 69 (80)
Q Consensus 4 aa~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a---~DGSg~GAAl~aA 69 (80)
+.+++.++.-++++ .|-+.|++.+..|.|.+.++ .++.+..+ +|..-+|||..+.
T Consensus 203 ~~~l~~l~~~ldP~--~IvlgG~i~~~~~~~~~~~~---------~~~~i~~s~l~~~a~~~GAa~l~~ 260 (267)
T 1woq_A 203 QRYFSHVEFLFSPE--LFIVGGGISKRADEYLPNLR---------LRTPIVPAVLRNEAGIVGAAIEIA 260 (267)
T ss_dssp HHHHHHHHHHHCCS--EEEEESGGGGGGGGTGGGCC---------CSSCEEECSCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC--EEEEeChhhcccHHHHHhhc---------cCceEEECCcCCcHHHHHHHHHHH
Confidence 34556666666654 47788999988777655443 12334444 5666778887654
No 78
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=34.96 E-value=15 Score=22.46 Aligned_cols=29 Identities=7% Similarity=-0.046 Sum_probs=23.0
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
-+..=+||+++...+.+.+...++++++-
T Consensus 8 ~v~fDlDGTL~d~~~~~~~~~~~~~~~~g 36 (225)
T 3d6j_A 8 VYLFDFDYTLADSSRGIVTCFRSVLERHG 36 (225)
T ss_dssp EEEECCBTTTEECHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 45567899999988888888888887753
No 79
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=34.52 E-value=15 Score=22.56 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=22.7
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
-+..=+||+++...+.+.+...+.++++
T Consensus 11 ~i~fDlDGTL~~~~~~~~~~~~~~~~~~ 38 (226)
T 1te2_A 11 AAIFDMDGLLIDSEPLWDRAELDVMASL 38 (226)
T ss_dssp EEEECCBTTTBCCHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCcCcCHHHHHHHHHHHHHHc
Confidence 3566789999999888888888888765
No 80
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=34.38 E-value=14 Score=22.87 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=21.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...++++++
T Consensus 7 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 33 (235)
T 2om6_A 7 VTFDVWNTLLDLNIMLDEFSHQLAKIS 33 (235)
T ss_dssp EEECCBTTTBCHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCcchhHHHHHHHHHHHc
Confidence 445689999998888888888777765
No 81
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=34.31 E-value=89 Score=19.83 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=36.4
Q ss_pred hhhhhhhhhcCC-ceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeC--------CcchHHHHHHHHHH
Q psy15537 6 GTAVLVRRIDRD-DITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAE--------DGSGKGAGLASAIA 71 (80)
Q Consensus 6 ~iaai~~~~~~~-~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~--------DGSg~GAAl~aA~a 71 (80)
+|..|+.+...+ ++.|.-|||- +...+.++++..+.+|++...+ ...|.++|.-.++.
T Consensus 19 ~l~Sl~~q~~~~~eiivvDd~S~--------d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~ 85 (255)
T 1qg8_A 19 SISSILSQTFSDFELFIMDDNSN--------EETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYAALINQAIE 85 (255)
T ss_dssp HHHHHHTCSCCCEEEEEEECSCC--------HHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHHHHHHHHHHH
T ss_pred HHHHHHhccCCceEEEEEECCCC--------chHHHHHHHHhhcCCEEEEecccccccccccccCHHHHHHHHHH
Confidence 345555555443 5777778875 2223445555445578888877 67889888877664
No 82
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=33.85 E-value=16 Score=22.95 Aligned_cols=27 Identities=19% Similarity=0.218 Sum_probs=21.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+..++.++++
T Consensus 7 viFDlDGTL~d~~~~~~~~~~~~~~~~ 33 (210)
T 2ah5_A 7 IFFDLDGTLVDSSIGIHNAFTYTFKEL 33 (210)
T ss_dssp EEECSBTTTEECHHHHHHHHHHHHHHH
T ss_pred EEEcCCCcCccCHHHHHHHHHHHHHHc
Confidence 445579999999998888888888776
No 83
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=33.51 E-value=22 Score=23.58 Aligned_cols=38 Identities=16% Similarity=0.276 Sum_probs=29.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAED 58 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~D 58 (80)
+..=+||++......+.+...++|+++. +. +.|.++.+
T Consensus 16 i~~DlDGTLl~~~~~is~~~~~al~~l~-~~-i~v~iaTG 53 (262)
T 2fue_A 16 CLFDVDGTLTPARQKIDPEVAAFLQKLR-SR-VQIGVVGG 53 (262)
T ss_dssp EEEESBTTTBSTTSCCCHHHHHHHHHHT-TT-SEEEEECS
T ss_pred EEEeCccCCCCCCCcCCHHHHHHHHHHH-hC-CEEEEEcC
Confidence 5567899999877777888889998885 34 77777763
No 84
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=33.16 E-value=14 Score=23.19 Aligned_cols=27 Identities=7% Similarity=0.180 Sum_probs=22.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+.+.++++++
T Consensus 18 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 44 (254)
T 3umg_A 18 VLFDTFGTVVDWRTGIATAVADYAARH 44 (254)
T ss_dssp EEECCBTTTBCHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCceecCchHHHHHHHHHHHHh
Confidence 556689999999888888888888776
No 85
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=32.53 E-value=19 Score=23.62 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=13.3
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||+++...+.+.+...++++++.
T Consensus 8 i~~DlDGTLl~~~~~i~~~~~~al~~l~ 35 (279)
T 3mpo_A 8 IAIDIDGTLLNEKNELAQATIDAVQAAK 35 (279)
T ss_dssp EEECC-----------CHHHHHHHHHHH
T ss_pred EEEcCcCCCCCCCCcCCHHHHHHHHHHH
Confidence 4456899999998888888999998875
No 86
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=31.99 E-value=26 Score=21.72 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=22.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...++++++
T Consensus 7 iifDlDGTL~d~~~~~~~~~~~~~~~~ 33 (234)
T 2hcf_A 7 VLFDIDGTLLKVESMNRRVLADALIEV 33 (234)
T ss_dssp EEECCBTTTEEECTHHHHHHHHHHHHH
T ss_pred EEEcCCCCcccCccchHHHHHHHHHHH
Confidence 445689999999999999999998885
No 87
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=31.88 E-value=15 Score=23.25 Aligned_cols=27 Identities=26% Similarity=0.281 Sum_probs=22.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+.+.+.++++
T Consensus 25 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 51 (254)
T 3umc_A 25 ILFDVFGTLVDWRSSLIEQFQALEREL 51 (254)
T ss_dssp EEECCBTTTEEHHHHHHHHHHHHHHHS
T ss_pred EEEeCCCccEecCccHHHHHHHHHHHh
Confidence 556689999998888888888888776
No 88
>2rqp_A Heterochromatin protein 1-binding protein 3; histone H1, alternative splicing, chromosomal protein, DNA-binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=31.85 E-value=28 Score=20.32 Aligned_cols=17 Identities=18% Similarity=0.284 Sum_probs=15.3
Q ss_pred eCccHHHHHHHHHHhhC
Q psy15537 30 YHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~ 46 (80)
.||.|.+++.++|..|-
T Consensus 8 ~hp~y~~MI~eAI~~Lk 24 (88)
T 2rqp_A 8 PRPKMDAILTEAIKACF 24 (88)
T ss_dssp CCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 58999999999999884
No 89
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=31.84 E-value=15 Score=22.79 Aligned_cols=28 Identities=7% Similarity=0.293 Sum_probs=22.6
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
-+..=+||+++...+.+.+.+.+.++++
T Consensus 7 ~i~fDlDGTL~d~~~~~~~~~~~~~~~~ 34 (240)
T 3qnm_A 7 NLFFDLDDTIWAFSRNARDTFEEVYQKY 34 (240)
T ss_dssp EEEECCBTTTBCHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCcCchhhHHHHHHHHHHHc
Confidence 3556689999999888888888888775
No 90
>2je6_B RRP41, exosome complex exonuclease 1; nuclease, hydrolase, exonuclease, phosphorolytic, exoribonuclease, RNA degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus} SCOP: d.14.1.4 d.101.1.1 PDB: 2jea_B* 2jeb_B* 2br2_B 2c37_B* 2c38_B* 2c39_B* 3l7z_B
Probab=31.66 E-value=1.1e+02 Score=20.57 Aligned_cols=39 Identities=18% Similarity=0.302 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhC-----CCCceEE---EEeCCcchHHHHHHHHHHh
Q psy15537 34 LKHWLQKYIQLLV-----PNKTFRL---LLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 34 f~~~l~~~l~~l~-----~~~~v~~---~~a~DGSg~GAAl~aA~a~ 72 (80)
....+.++++..+ |...|.+ +++.||+-.-|++.|+.+.
T Consensus 105 ~s~li~r~l~~~i~~~~~p~~~i~I~~~VL~~DG~~~~aai~aa~~A 151 (250)
T 2je6_B 105 LSKVIREALESAVLVELFPRTAIDVFTEILQADAGSRLVSLMAASLA 151 (250)
T ss_dssp HHHHHHHHHHTTBCGGGSTTEEEEEEEEEEECSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHhhCCCcEEEEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3455666666644 3223443 6899999998888887654
No 91
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=31.65 E-value=15 Score=22.80 Aligned_cols=28 Identities=11% Similarity=0.157 Sum_probs=23.0
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
-+..=+||+++...+.+.+.+.++++++
T Consensus 9 ~i~fDlDGTL~d~~~~~~~~~~~~~~~~ 36 (238)
T 3ed5_A 9 TLLFDVDDTILDFQAAEALALRLLFEDQ 36 (238)
T ss_dssp EEEECCBTTTBCHHHHHHHHHHHHHHHT
T ss_pred EEEEcCcCcCcCCchhHHHHHHHHHHHc
Confidence 3556789999999888888888888875
No 92
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=31.57 E-value=23 Score=21.96 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=20.1
Q ss_pred eEeCceeeeCccHHHHHHHHHHhh
Q psy15537 22 AVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 22 avDGsvye~~p~f~~~l~~~l~~l 45 (80)
=+||+++...|.+.+.+++.++++
T Consensus 7 D~DGTL~ds~~~~~~a~~~~~~~~ 30 (216)
T 3kbb_A 7 DMDGVLMDTEPLYFEAYRRVAESY 30 (216)
T ss_dssp ESBTTTBCCGGGHHHHHHHHHHHT
T ss_pred CCCCcccCCHHHHHHHHHHHHHHc
Confidence 469999999999888888887765
No 93
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=31.13 E-value=45 Score=23.15 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=21.1
Q ss_pred HHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHHh
Q psy15537 37 WLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 37 ~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~~ 75 (80)
.+.+.+++++ |+.+|.+. |-.+|+|++.-.+....
T Consensus 123 ~~~~~l~~~~~~~p~~~l~vt----GHSLGGalA~l~a~~l~ 160 (279)
T 3uue_A 123 DIFTAVKKYKKEKNEKRVTVI----GHSLGAAMGLLCAMDIE 160 (279)
T ss_dssp HHHHHHHHHHHHHTCCCEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEc----ccCHHHHHHHHHHHHHH
Confidence 3445555555 56666554 77788888766554433
No 94
>1dj0_A Pseudouridine synthase I; alpha/beta fold, RNA-binding motif, RNA-modifying enzyme, lyase; 1.50A {Escherichia coli} SCOP: d.265.1.1 PDB: 2nqp_A 2nr0_A 2nre_A
Probab=31.06 E-value=44 Score=23.37 Aligned_cols=30 Identities=23% Similarity=0.264 Sum_probs=24.2
Q ss_pred ceEEeEeCceeee------CccHHHHHHHHHHhhCC
Q psy15537 18 DITIAVDGSLYKY------HPRLKHWLQKYIQLLVP 47 (80)
Q Consensus 18 ~~~IavDGsvye~------~p~f~~~l~~~l~~l~~ 47 (80)
.++|+.||+-|.- .+..++.++++|..+++
T Consensus 7 ~l~i~YdGt~y~GwQ~Q~~~~TVq~~Le~AL~~~~~ 42 (264)
T 1dj0_A 7 ALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVAN 42 (264)
T ss_dssp EEEEEECCTTSSCSCCTTCSSCHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCceeEEECcCCCCHHHHHHHHHHHHhC
Confidence 4789999998743 45788999999999863
No 95
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=30.93 E-value=17 Score=21.96 Aligned_cols=27 Identities=15% Similarity=0.240 Sum_probs=22.0
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...+.++++
T Consensus 8 i~fDlDGTL~~~~~~~~~~~~~~~~~~ 34 (214)
T 3e58_A 8 IIFDMDGVLFDTEKYYYDRRASFLGQK 34 (214)
T ss_dssp EEEESBTTTBCCHHHHHHHHHHHHHHT
T ss_pred EEEcCCCCccccHHHHHHHHHHHHHHc
Confidence 445689999999888888888888775
No 96
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=30.74 E-value=18 Score=22.15 Aligned_cols=28 Identities=25% Similarity=0.468 Sum_probs=21.6
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||+++...+.+.+...+.++.+-
T Consensus 11 i~fDlDGTL~~~~~~~~~~~~~~~~~l~ 38 (234)
T 3ddh_A 11 IAFDADDTLWSNEPFFQEVEKQYTDLLK 38 (234)
T ss_dssp EEECCBTTTBCCHHHHHHHHHHHHHHTG
T ss_pred EEEeCCCCCccCcchHHHHHHHHHHHHH
Confidence 5566899999999888888776666554
No 97
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=30.31 E-value=17 Score=22.39 Aligned_cols=27 Identities=15% Similarity=0.383 Sum_probs=21.8
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...+.++++
T Consensus 7 iifDlDGTL~d~~~~~~~~~~~~~~~~ 33 (209)
T 2hdo_A 7 LMFDIDGTLTNSQPAYTTVMREVLATY 33 (209)
T ss_dssp EEECSBTTTEECHHHHHHHHHHHHHTT
T ss_pred EEEcCCCCCcCCHHHHHHHHHHHHHHh
Confidence 445689999999998888888888765
No 98
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=30.27 E-value=15 Score=22.23 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=21.6
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...++++++
T Consensus 9 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 35 (190)
T 2fi1_A 9 YIWDLGGTLLDNYETSTAAFVETLALY 35 (190)
T ss_dssp EEECTBTTTBCHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCcCCCHHHHHHHHHHHHHHh
Confidence 455679999998888888888887775
No 99
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=30.12 E-value=16 Score=22.44 Aligned_cols=26 Identities=8% Similarity=0.015 Sum_probs=21.0
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
..=+||+++...+.+.+...++++++
T Consensus 6 ~fDlDGTL~d~~~~~~~~~~~~~~~~ 31 (221)
T 2wf7_A 6 LFDLDGVITDTAEYHFRAWKALAEEI 31 (221)
T ss_dssp EECCBTTTBTHHHHHHHHHHHHHHHT
T ss_pred EECCCCcccCChHHHHHHHHHHHHHc
Confidence 34579999998888888888888775
No 100
>1ghc_A GH1; chromosomal protein; NMR {Gallus gallus} SCOP: a.4.5.13
Probab=30.03 E-value=28 Score=19.55 Aligned_cols=17 Identities=12% Similarity=0.149 Sum_probs=15.1
Q ss_pred eCccHHHHHHHHHHhhC
Q psy15537 30 YHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~ 46 (80)
.||.|.+++.++|..|-
T Consensus 2 ~hP~y~~mI~~AI~alk 18 (75)
T 1ghc_A 2 AGPSVTELITKAVSASK 18 (75)
T ss_dssp CSSSHHHHHHHHHHHCS
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 48999999999998875
No 101
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=29.66 E-value=38 Score=25.01 Aligned_cols=43 Identities=12% Similarity=0.164 Sum_probs=31.7
Q ss_pred eeCccHHHHHHHHHHhhCC---------------CCceEEEEe---CCcchHHHHHHHHHH
Q psy15537 29 KYHPRLKHWLQKYIQLLVP---------------NKTFRLLLA---EDGSGKGAGLASAIA 71 (80)
Q Consensus 29 e~~p~f~~~l~~~l~~l~~---------------~~~v~~~~a---~DGSg~GAAl~aA~a 71 (80)
-..|+|.++|++-++.++| ..+|++... +..+.+|+++.|.+.
T Consensus 337 sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~ 397 (427)
T 3dwl_A 337 TLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTP 397 (427)
T ss_dssp GCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHST
T ss_pred cCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecccc
Confidence 3578999999999999974 234555544 346899999998753
No 102
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=29.61 E-value=53 Score=22.54 Aligned_cols=35 Identities=29% Similarity=0.365 Sum_probs=20.4
Q ss_pred HHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHHh
Q psy15537 37 WLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 37 ~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~~ 75 (80)
.+.+.++++. |+.+|.+. |-.+|+|+++-.+....
T Consensus 122 ~~~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 122 DIIKELKEVVAQNPNYELVVV----GHSLGAAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHHCCCCeEEEE----ecCHHHHHHHHHHHHHH
Confidence 3444555554 34455443 77888888776655543
No 103
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=29.37 E-value=23 Score=22.98 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=22.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||++....+.+.+...++++++.
T Consensus 8 i~fDlDGTLl~~~~~i~~~~~~al~~l~ 35 (274)
T 3fzq_A 8 LILDIDGTLRDEVYGIPESAKHAIRLCQ 35 (274)
T ss_dssp EEECSBTTTBBTTTBCCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCcCCHHHHHHHHHHH
Confidence 3445799999998888888888988874
No 104
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=28.98 E-value=58 Score=23.49 Aligned_cols=30 Identities=17% Similarity=0.358 Sum_probs=23.5
Q ss_pred CccHHHHHHHHHHhhC-CC-CceEEEEeCCcc
Q psy15537 31 HPRLKHWLQKYIQLLV-PN-KTFRLLLAEDGS 60 (80)
Q Consensus 31 ~p~f~~~l~~~l~~l~-~~-~~v~~~~a~DGS 60 (80)
...|...+.+-++.++ |+ .+-++..+.|||
T Consensus 24 ~~~~~~~~~~~~~~~~~p~~~~reIi~T~DGS 55 (308)
T 3vyw_A 24 EEEFNVILREFLRFAYNPEESGQEIADTADGS 55 (308)
T ss_dssp HHHHHHHHHHHHHHCCCTTCCCEEEEECTTSC
T ss_pred HHHHHHHHHHHHHHhcCcccccCeeEECCCCC
Confidence 4467788888888887 64 567889999996
No 105
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=28.86 E-value=24 Score=23.15 Aligned_cols=38 Identities=21% Similarity=0.347 Sum_probs=27.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAE 57 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~ 57 (80)
+..=+||+++...+...+...++++++.. ..+.+.++.
T Consensus 8 i~fDlDGTLl~~~~~i~~~~~~al~~l~~-~G~~~~iaT 45 (279)
T 4dw8_A 8 IVLDLDGTLTNSKKEISSRNRETLIRIQE-QGIRLVLAS 45 (279)
T ss_dssp EEECCCCCCSCTTSCCCHHHHHHHHHHHH-TTCEEEEEC
T ss_pred EEEeCCCCCCCCCCccCHHHHHHHHHHHH-CCCEEEEEc
Confidence 44568999999988888999999988852 234444443
No 106
>3on2_A Probable transcriptional regulator; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; HET: MSE PG6; 1.96A {Rhodococcus jostii}
Probab=28.77 E-value=28 Score=20.86 Aligned_cols=22 Identities=9% Similarity=-0.090 Sum_probs=16.6
Q ss_pred CceeeeCccHHHHHHHHHHhhC
Q psy15537 25 GSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 25 Gsvye~~p~f~~~l~~~l~~l~ 46 (80)
|++|.|+|.=.+.+.+.+++..
T Consensus 47 ~t~Y~~F~sK~~L~~~~~~~~~ 68 (199)
T 3on2_A 47 AAPSKHFRDRQALLDALAESGF 68 (199)
T ss_dssp --CCCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHH
Confidence 8999999998888887776654
No 107
>1hst_A Histone H5; chromosomal protein; 2.60A {Gallus gallus} SCOP: a.4.5.13
Probab=28.38 E-value=27 Score=20.70 Aligned_cols=17 Identities=18% Similarity=0.214 Sum_probs=15.0
Q ss_pred eCccHHHHHHHHHHhhC
Q psy15537 30 YHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~ 46 (80)
.||.|.+++.++|..|-
T Consensus 6 ~hP~y~~MI~eAI~~lk 22 (90)
T 1hst_A 6 SHPTYSEMIAAAIRAEK 22 (90)
T ss_dssp CCCCHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 48999999999998874
No 108
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=28.28 E-value=20 Score=22.45 Aligned_cols=28 Identities=11% Similarity=0.221 Sum_probs=22.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||+++...+.+.+...++++++-
T Consensus 22 i~fDlDGTL~d~~~~~~~~~~~~~~~~g 49 (237)
T 4ex6_A 22 VILDLDGTLADTPAAIATITAEVLAAMG 49 (237)
T ss_dssp EEECSBTTTBCCHHHHHHHHHHHHHHTT
T ss_pred EEEcCCCCCcCCHHHHHHHHHHHHHHcC
Confidence 4456899999998888888888887763
No 109
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=28.17 E-value=25 Score=23.20 Aligned_cols=38 Identities=13% Similarity=0.322 Sum_probs=28.0
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAE 57 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~ 57 (80)
+..=+||+++...+...+...++++++... .+.+.++.
T Consensus 9 i~fDlDGTLl~~~~~i~~~~~~al~~l~~~-G~~~~iaT 46 (290)
T 3dnp_A 9 LALNIDGALLRSNGKIHQATKDAIEYVKKK-GIYVTLVT 46 (290)
T ss_dssp EEECCCCCCSCTTSCCCHHHHHHHHHHHHT-TCEEEEBC
T ss_pred EEEcCCCCCCCCCCccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 445689999999889999999999888522 34555543
No 110
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=27.96 E-value=19 Score=22.31 Aligned_cols=28 Identities=11% Similarity=0.186 Sum_probs=22.3
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||+++...+.+.+...++++++-
T Consensus 7 i~fDlDGTL~d~~~~~~~~~~~~~~~~g 34 (226)
T 3mc1_A 7 VLFDLDGTLTDSAEGITKSVKYSLNKFD 34 (226)
T ss_dssp EEECSBTTTBCCHHHHHHHHHHHHHTTT
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHHcC
Confidence 4455799999998888888888887753
No 111
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=27.85 E-value=63 Score=19.56 Aligned_cols=45 Identities=16% Similarity=0.224 Sum_probs=29.1
Q ss_pred cCCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcch
Q psy15537 15 DRDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSG 61 (80)
Q Consensus 15 ~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg 61 (80)
......+.|||--.+... + +-+.+.++..-++..|.+.+.++|+.
T Consensus 85 ~~GD~Il~ing~~v~~~~-~-~~~~~~l~~~~~g~~v~l~v~R~g~~ 129 (131)
T 1wfg_A 85 RPGDEVLEWNGRLLQGAT-F-EEVYNIILESKPEPQVELVVSRSGPS 129 (131)
T ss_dssp CTTCEEEEETTEECTTCC-H-HHHHHHHHHTSSSSEEEEEEEEECSC
T ss_pred CCCCEEEEECCEECCCCC-H-HHHHHHHHhcCCCCEEEEEEEcCCCC
Confidence 334688999998776432 2 23444555554567888888887764
No 112
>1uss_A Histone H1; DNA binding protein, linker histone, DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13 PDB: 1yqa_A
Probab=27.82 E-value=32 Score=20.21 Aligned_cols=17 Identities=18% Similarity=0.061 Sum_probs=15.0
Q ss_pred eCccHHHHHHHHHHhhC
Q psy15537 30 YHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~ 46 (80)
.||.|.+++.++|..|-
T Consensus 6 ~hP~y~~MI~eAI~alk 22 (88)
T 1uss_A 6 SSLTYKEMILKSMPQLN 22 (88)
T ss_dssp SSCCHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHhc
Confidence 48999999999998874
No 113
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=27.47 E-value=60 Score=22.07 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=22.1
Q ss_pred HHHHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHHh
Q psy15537 35 KHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 35 ~~~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~~ 75 (80)
++.+.+.++++. |+.+|.+. |-.+|+|++.-.+....
T Consensus 108 ~~~~~~~l~~~~~~~p~~~i~vt----GHSLGGalA~l~a~~l~ 147 (261)
T 1uwc_A 108 QDQVESLVKQQASQYPDYALTVT----GHSLGASMAALTAAQLS 147 (261)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCceEEEE----ecCHHHHHHHHHHHHHh
Confidence 344555566654 55555544 77888888766555443
No 114
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=27.36 E-value=24 Score=21.87 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=18.2
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
..=+||+++...+.+.+...+.++.+
T Consensus 6 ~fDlDGTL~~~~~~~~~~~~~~~~~l 31 (230)
T 3vay_A 6 TFDLDDTLWDTAPAIVGAEAALRDWL 31 (230)
T ss_dssp EECCBTTTBCSHHHHHHHHHHHHHHH
T ss_pred EecCcccCcCCchHHHHHHHHHHHHH
Confidence 34479999999887777665555444
No 115
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=27.13 E-value=21 Score=22.59 Aligned_cols=27 Identities=15% Similarity=0.293 Sum_probs=22.4
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...++++++
T Consensus 27 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 53 (243)
T 3qxg_A 27 VLFDMDGVLFNSMPYHSEAWHQVMKTH 53 (243)
T ss_dssp EEECSBTTTBCCHHHHHHHHHHHHHHT
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHHh
Confidence 455689999999988888888888775
No 116
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=26.49 E-value=93 Score=17.55 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=24.5
Q ss_pred CCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCc
Q psy15537 16 RDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG 59 (80)
Q Consensus 16 ~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DG 59 (80)
.....++|||.-..... -+.+.++..-++..+.+...+||
T Consensus 24 ~GD~Il~InG~~v~~~~----~l~~~l~~~~~g~~v~l~v~R~g 63 (94)
T 2kl1_A 24 AGDRIAAIDGQPINTSE----QIVSYVREKQAGDRVRVTFIRDR 63 (94)
T ss_dssp TTCEEEEETTBCCCCHH----HHHHHHHHSCTTCCEEEEEEETT
T ss_pred CCCEEEEECCEECCCHH----HHHHHHHhCCCCCEEEEEEEECC
Confidence 34788999998876543 33445544434556666665555
No 117
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=26.14 E-value=28 Score=28.09 Aligned_cols=49 Identities=16% Similarity=0.310 Sum_probs=31.3
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEE------EeCCcchHHHHHHHHHHh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLL------LAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~------~a~DGSg~GAAl~aA~a~ 72 (80)
-+|++-|+|+.. ..+.+.+.+.+.+..+++. ..++|-.+|.|++|+...
T Consensus 707 ~~VvLSGGVa~N-----~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 707 KNVALSGGVAYN-----ELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp SCCCEESSTTCC-----HHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred CEEEEEchHHHH-----HHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 468999999987 4555555555533333222 234556899999987653
No 118
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=26.08 E-value=23 Score=21.87 Aligned_cols=27 Identities=15% Similarity=0.091 Sum_probs=21.1
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...+.++++
T Consensus 7 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 33 (229)
T 2fdr_A 7 IIFDCDGVLVDSEIIAAQVESRLLTEA 33 (229)
T ss_dssp EEECSBTTTBCCHHHHHHHHHHHHHHT
T ss_pred EEEcCCCCcCccHHHHHHHHHHHHHHh
Confidence 445689999998888877777777665
No 119
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=26.07 E-value=21 Score=22.32 Aligned_cols=26 Identities=8% Similarity=0.011 Sum_probs=20.9
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
..=+||+++...+.+.+.+.++++++
T Consensus 6 ~fDlDGTL~d~~~~~~~~~~~~~~~~ 31 (233)
T 3nas_A 6 IFDLDGVITDTAEYHFLAWKHIAEQI 31 (233)
T ss_dssp EECSBTTTBCHHHHHHHHHHHHHHHT
T ss_pred EECCCCCcCCCHHHHHHHHHHHHHHc
Confidence 34579999999888888888888765
No 120
>2fd5_A Transcriptional regulator; DNA-binding protein, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: a.4.1.9 a.121.1.1
Probab=25.97 E-value=36 Score=20.41 Aligned_cols=22 Identities=14% Similarity=0.270 Sum_probs=18.7
Q ss_pred CceeeeCccHHHHHHHHHHhhC
Q psy15537 25 GSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 25 Gsvye~~p~f~~~l~~~l~~l~ 46 (80)
|++|.|+|.=.+.+.+.+++..
T Consensus 42 ~tly~~F~sK~~L~~a~~~~~~ 63 (180)
T 2fd5_A 42 GGFYAHFQSKDALMLEAFEQLL 63 (180)
T ss_dssp GGGGGTCSCHHHHHHHHHHHHH
T ss_pred cHHHHHCCCHHHHHHHHHHHHH
Confidence 8999999998888888877655
No 121
>4e1p_A Protein LSR2; anti-parallel beta sheet, dimer, DNA binding protein; 1.73A {Mycobacterium tuberculosis}
Probab=25.90 E-value=82 Score=17.62 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=12.6
Q ss_pred ceEEeEeCceeeeCcc
Q psy15537 18 DITIAVDGSLYKYHPR 33 (80)
Q Consensus 18 ~~~IavDGsvye~~p~ 33 (80)
.+..++||.-||---.
T Consensus 22 TV~F~ldG~~YeIDLs 37 (61)
T 4e1p_A 22 TVEFGLDGVTYEIDLS 37 (61)
T ss_dssp EEEEEETTEEEEEEEC
T ss_pred EEEEEECCEEEEEECC
Confidence 3678999999996544
No 122
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=25.63 E-value=27 Score=22.26 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=23.4
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
-+..=+||+++...+.+.+...++++.+-
T Consensus 15 ~iifDlDGTL~d~~~~~~~~~~~~~~~l~ 43 (251)
T 2pke_A 15 LVGFDGDDTLWKSEDYYRTAEADFEAILS 43 (251)
T ss_dssp EEEECCBTTTBCCHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCccCcHhHHHHHHHHHHHHH
Confidence 35567899999999999888888886553
No 123
>1oys_A Ribonuclease PH; transferase, tRNA processing; 2.40A {Bacillus subtilis} SCOP: d.14.1.4 d.101.1.1 PDB: 1oyp_A 1oyr_A
Probab=25.48 E-value=1.5e+02 Score=19.74 Aligned_cols=35 Identities=17% Similarity=0.410 Sum_probs=23.8
Q ss_pred HHHHHHHhhCC-----CCceEE---EEeCCcchHHHHHHHHHH
Q psy15537 37 WLQKYIQLLVP-----NKTFRL---LLAEDGSGKGAGLASAIA 71 (80)
Q Consensus 37 ~l~~~l~~l~~-----~~~v~~---~~a~DGSg~GAAl~aA~a 71 (80)
.+.++++.+++ ...|.+ ++..||+-.-|++.|+.+
T Consensus 93 li~r~l~~~i~~~~l~~~~i~i~~~VL~~DG~~~~aai~aa~~ 135 (245)
T 1oys_A 93 LIGRALRAVVDLEKLGERTIWIDCDVIQADGGTRTASITGAFL 135 (245)
T ss_dssp HHHHHHHHTBCHHHHCSCEEEEEEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHhHCCCEEEEEEEEEEeCCCCHHHHHHHHHHH
Confidence 67777776663 333322 488999999888877654
No 124
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=25.44 E-value=26 Score=22.43 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=22.5
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+.++++++++
T Consensus 7 viFDlDGTL~ds~~~~~~~~~~~~~~~ 33 (240)
T 2hi0_A 7 AIFDMDGTILDTSADLTSALNYAFEQT 33 (240)
T ss_dssp EEECSBTTTEECHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCccCHHHHHHHHHHHHHHc
Confidence 445679999999999988888888775
No 125
>2wnr_B Probable exosome complex exonuclease 1; phosphate binding, 3'-5' exoribonuclease, hydrolase; 2.65A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=25.25 E-value=1.5e+02 Score=19.67 Aligned_cols=39 Identities=15% Similarity=0.347 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhC-----CCCceEE---EEeCCcchHHHHHHHHHHh
Q psy15537 34 LKHWLQKYIQLLV-----PNKTFRL---LLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 34 f~~~l~~~l~~l~-----~~~~v~~---~~a~DGSg~GAAl~aA~a~ 72 (80)
....++++++..+ |...|.+ .+..||+-.-|++.|+.+.
T Consensus 101 l~~ll~r~l~~~i~l~~~p~~~I~i~~~VL~~dG~~~~a~i~aa~~A 147 (240)
T 2wnr_B 101 ISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCAGITAASVA 147 (240)
T ss_dssp HHHHHHHHHGGGBCGGGSTTEEEEEEEEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHCCCcEEEEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3455666666544 3323333 5788999999988887654
No 126
>1xhk_A Putative protease LA homolog; LON protease, ATP dependent, catalytic DYAD, hydrolase; HET: MES; 1.90A {Methanocaldococcus jannaschii} SCOP: d.14.1.10
Probab=25.19 E-value=1.4e+02 Score=19.35 Aligned_cols=28 Identities=29% Similarity=0.290 Sum_probs=20.9
Q ss_pred CCceEEEEe-----CCcchHHHHHHHHHHhHHh
Q psy15537 48 NKTFRLLLA-----EDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 48 ~~~v~~~~a-----~DGSg~GAAl~aA~a~~~~ 75 (80)
+.+|++.++ .||++.|.|++.|+.+...
T Consensus 79 ~~di~vn~~~g~~~k~GpsadLaia~AilSa~~ 111 (187)
T 1xhk_A 79 NKEIYIQFSQSYSKIDGDSATAAVCLAIISALL 111 (187)
T ss_dssp TEEEEEEESSCCCTTTGGGGHHHHHHHHHHHHH
T ss_pred CeeEEEEECCCCcCCcCchHHHHHHHHHHHHcc
Confidence 456666654 6799999999998876543
No 127
>2nn6_F MTR3, exosome component 6; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=25.04 E-value=1.5e+02 Score=20.18 Aligned_cols=20 Identities=40% Similarity=0.506 Sum_probs=15.9
Q ss_pred EEEeCCcchHHHHHHHHHHh
Q psy15537 53 LLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 53 ~~~a~DGSg~GAAl~aA~a~ 72 (80)
.+++.||+-.-|++.|+.+.
T Consensus 149 ~VL~~DG~~~~aai~aa~~A 168 (272)
T 2nn6_F 149 LLLEDGGSALAAALTAAALA 168 (272)
T ss_dssp EEEECCSSHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHH
Confidence 35889999999998887654
No 128
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=24.93 E-value=26 Score=22.52 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=22.7
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+.+.+.++++
T Consensus 26 iiFDlDGTL~d~~~~~~~~~~~~~~~~ 52 (243)
T 2hsz_A 26 IGFDLDGTLVNSLPDLALSINSALKDV 52 (243)
T ss_dssp EEECSBTTTEECHHHHHHHHHHHHHHT
T ss_pred EEEcCCCcCCCCHHHHHHHHHHHHHHc
Confidence 556789999999999988888888775
No 129
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=24.87 E-value=20 Score=22.13 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=21.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+.+.+.+++.
T Consensus 9 i~fD~DGTL~d~~~~~~~~~~~~~~~~ 35 (240)
T 3smv_A 9 LTFDCYGTLIDWETGIVNALQPLAKRT 35 (240)
T ss_dssp EEECCBTTTBCHHHHHHHHTHHHHHHH
T ss_pred EEEeCCCcCcCCchhHHHHHHHHHHHh
Confidence 455689999998888888888888775
No 130
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=24.86 E-value=25 Score=21.99 Aligned_cols=27 Identities=19% Similarity=0.375 Sum_probs=22.7
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...++++++
T Consensus 26 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 52 (247)
T 3dv9_A 26 VLFDMDGVLFDSMPNHAESWHKIMKRF 52 (247)
T ss_dssp EEEESBTTTBCCHHHHHHHHHHHHHHT
T ss_pred EEECCCCccCcCHHHHHHHHHHHHHHc
Confidence 556789999999888888888888775
No 131
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=24.77 E-value=75 Score=22.72 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=21.1
Q ss_pred HHHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHHh
Q psy15537 36 HWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 36 ~~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~~ 75 (80)
+.+.+.+++++ |+.+|.+. |-.+|+|++.-.+....
T Consensus 120 ~~l~~~l~~~~~~~p~~~i~vt----GHSLGGAlA~L~a~~l~ 158 (319)
T 3ngm_A 120 AAATAAVAKARKANPSFKVVSV----GHSLGGAVATLAGANLR 158 (319)
T ss_dssp HHHHHHHHHHHHSSTTCEEEEE----EETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCceEEe----ecCHHHHHHHHHHHHHH
Confidence 34445555555 44555544 77788888766555443
No 132
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=24.66 E-value=30 Score=23.02 Aligned_cols=28 Identities=25% Similarity=0.304 Sum_probs=22.6
Q ss_pred eEEeEeCceeeeCc-cHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHP-RLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p-~f~~~l~~~l~~l~ 46 (80)
+..=+||+++...+ ...+...++++++.
T Consensus 24 i~~DlDGTLl~~~~~~i~~~~~~al~~l~ 52 (283)
T 3dao_A 24 IATDIDGTLVKDGSLLIDPEYMSVIDRLI 52 (283)
T ss_dssp EEECCBTTTBSTTCSCCCHHHHHHHHHHH
T ss_pred EEEeCcCCCCCCCCCcCCHHHHHHHHHHH
Confidence 55678999998777 77788888888875
No 133
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=24.40 E-value=27 Score=22.26 Aligned_cols=27 Identities=11% Similarity=0.149 Sum_probs=21.6
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...|.+.+.+.+.++++
T Consensus 14 viFDlDGTL~ds~~~~~~~~~~~~~~~ 40 (231)
T 2p11_A 14 FLFDCDNTLLDNDHVLADLRAHMMREF 40 (231)
T ss_dssp EEECCBTTTBCHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCEecHHHHHHHHHHHHHHc
Confidence 455789999999998888887777665
No 134
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=24.39 E-value=19 Score=23.31 Aligned_cols=28 Identities=18% Similarity=0.194 Sum_probs=22.2
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||+++...+.+.+...++++++.
T Consensus 6 i~~DlDGTLl~~~~~i~~~~~~al~~l~ 33 (231)
T 1wr8_A 6 ISIDIDGTITYPNRMIHEKALEAIRRAE 33 (231)
T ss_dssp EEEESTTTTBCTTSCBCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCcCCHHHHHHHHHHH
Confidence 3456799999888888888888888874
No 135
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=24.38 E-value=51 Score=22.38 Aligned_cols=46 Identities=15% Similarity=-0.031 Sum_probs=32.7
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHH
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAI 70 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~ 70 (80)
...|.+-|++.+. |.+.+++.+++..+ ++...++..-.||+..+.-
T Consensus 235 p~~vvlgGGv~~~---~~~~l~~~l~~~~~----~i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 235 DLPLHFIGSVAFH---YREVLSSVIKKRGL----TLGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp TSCEEEESHHHHH---THHHHHHHHHHTTC----CEEEEESCSHHHHHHHHHH
T ss_pred CceEEEECchHHh---hHHHHHHHHHHcCC----eecccCcCHHHHHHHHHHh
Confidence 3457788999876 66778877777542 3445668888899887653
No 136
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=24.09 E-value=93 Score=17.22 Aligned_cols=41 Identities=20% Similarity=0.078 Sum_probs=25.1
Q ss_pred CCceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcc
Q psy15537 16 RDDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGS 60 (80)
Q Consensus 16 ~~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGS 60 (80)
.....++|||.-....+ +. -+.+.++. ++..+.+.+.++|.
T Consensus 53 ~GD~I~~ing~~v~~~~-~~-~~~~~l~~--~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 53 PGDRLLSVDGIRLLGTT-HA-EAMSILKQ--CGQEAALLIEYDVS 93 (97)
T ss_dssp TTCEEEEETTEECSSCC-HH-HHHHHHHH--SCSEEEEEEEEECC
T ss_pred CCCEEEEECCEECCCCC-HH-HHHHHHHc--CCCeEEEEEEeCCC
Confidence 34688999998776621 22 23334444 56678777776653
No 137
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=23.92 E-value=1.2e+02 Score=20.91 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=26.9
Q ss_pred CceEEeEeCceeeeCccHHHHHHHHHHhhC-CCCceEEEEeCCcchHH
Q psy15537 17 DDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PNKTFRLLLAEDGSGKG 63 (80)
Q Consensus 17 ~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~~~~v~~~~a~DGSg~G 63 (80)
..++|-+.||+... |.+.+.+-+.+.++. .+.++.++++ .|+-++
T Consensus 37 k~iVIKlGGs~l~~-~~~~~~~~~~i~~l~~~G~~vViVhG-gG~~i~ 82 (298)
T 2rd5_A 37 KTIVVKYGGAAMTS-PELKSSVVSDLVLLACVGLRPILVHG-GGPDIN 82 (298)
T ss_dssp CEEEEEECTHHHHC-HHHHHHHHHHHHHHHHTTCEEEEEEC-CHHHHH
T ss_pred CEEEEEECchhhCC-hhHHHHHHHHHHHHHHCCCCEEEEEC-CcHHHH
Confidence 46899999999875 444444444554554 3456666655 444443
No 138
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=23.74 E-value=26 Score=22.22 Aligned_cols=26 Identities=12% Similarity=0.037 Sum_probs=20.9
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
..=+||+++...+.+.+.+.+.++++
T Consensus 6 iFDlDGTL~d~~~~~~~~~~~~~~~~ 31 (241)
T 2hoq_A 6 FFDLDDTLVDTSKLAEIARKNAIENM 31 (241)
T ss_dssp EECSBTTTBCHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCChhhHHHHHHHHHHHH
Confidence 34579999999988888888887776
No 139
>3kkd_A Transcriptional regulator; TETR, structural genomics, PSI-2, structure initiative, midwest center for structural genomic DNA-binding; HET: PGE 15P; 2.10A {Pseudomonas aeruginosa PAO1}
Probab=23.64 E-value=45 Score=21.02 Aligned_cols=22 Identities=14% Similarity=0.268 Sum_probs=13.4
Q ss_pred CceeeeCccHHHHHHHHHHhhC
Q psy15537 25 GSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 25 Gsvye~~p~f~~~l~~~l~~l~ 46 (80)
|++|.|+|.=.+.+.+.+++..
T Consensus 70 ~tlY~~F~sKe~L~~a~~~~~~ 91 (237)
T 3kkd_A 70 SATTYYFKDIDDLITDTFALFV 91 (237)
T ss_dssp TTC-----CHHHHHHHHHHHHH
T ss_pred hHHHHHcCCHHHHHHHHHHHHH
Confidence 8999999998888887776655
No 140
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=23.63 E-value=32 Score=21.23 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=21.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...+.++++
T Consensus 9 i~fDlDGTL~~~~~~~~~~~~~~~~~~ 35 (233)
T 3s6j_A 9 FIFDLDGTLTDSVYQNVAAWKEALDAE 35 (233)
T ss_dssp EEECCBTTTEECHHHHHHHHHHHHHHT
T ss_pred EEEcCCCccccChHHHHHHHHHHHHHc
Confidence 556789999999888888888888775
No 141
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=23.62 E-value=29 Score=21.83 Aligned_cols=27 Identities=15% Similarity=0.258 Sum_probs=22.2
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...+.++++
T Consensus 32 iifDlDGTL~d~~~~~~~~~~~~~~~~ 58 (240)
T 3sd7_A 32 VLFDLDGTLTDPKEGITKSIQYSLNSF 58 (240)
T ss_dssp EEECSBTTTEECHHHHHHHHHHHHHHT
T ss_pred EEEecCCcCccCHHHHHHHHHHHHHHc
Confidence 455789999999888888888888775
No 142
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=23.54 E-value=35 Score=21.44 Aligned_cols=27 Identities=7% Similarity=0.180 Sum_probs=21.2
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...|.+.+.+.+.+++.
T Consensus 6 viFDlDGTL~d~~~~~~~~~~~~~~~~ 32 (220)
T 2zg6_A 6 VLVDFGNTLVGFKPVFYEKVYQVLKDN 32 (220)
T ss_dssp EEECSBTTTEEEEETTHHHHHHHHHHT
T ss_pred EEEcCCCceecccccHHHHHHHHHHHh
Confidence 445679999999988888787777665
No 143
>2aya_A DNA polymerase III subunit TAU; KH-fold, C-terminus of polymerase III TAU subunit, transferase; HET: DNA; NMR {Escherichia coli}
Probab=23.47 E-value=1.3e+02 Score=18.37 Aligned_cols=29 Identities=7% Similarity=0.143 Sum_probs=20.9
Q ss_pred CccHHHHHHHHHHhhCCC-CceEEEEeCCc
Q psy15537 31 HPRLKHWLQKYIQLLVPN-KTFRLLLAEDG 59 (80)
Q Consensus 31 ~p~f~~~l~~~l~~l~~~-~~v~~~~a~DG 59 (80)
.|..+++++++|.+.++. .++.+...+++
T Consensus 68 ~~~~~~~L~~ALs~~~G~~v~L~i~~g~~~ 97 (128)
T 2aya_A 68 NRGAQQKLAEALSMLKGSTVELTIVEDDNP 97 (128)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEEEECCCT
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Confidence 578999999999998843 56666654333
No 144
>3m7n_D Probable exosome complex exonuclease 1; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 3m85_D 2ba0_F 2ba1_E
Probab=23.46 E-value=1.6e+02 Score=20.19 Aligned_cols=39 Identities=15% Similarity=0.307 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhC-----CCCceEE---EEeCCcchHHHHHHHHHHh
Q psy15537 34 LKHWLQKYIQLLV-----PNKTFRL---LLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 34 f~~~l~~~l~~l~-----~~~~v~~---~~a~DGSg~GAAl~aA~a~ 72 (80)
....+.++++.++ |...|.+ ++..||+-.-|++.|+.+.
T Consensus 101 i~~li~r~l~~~i~~~~~p~~~I~V~~~VL~~DG~~~~Aai~aa~lA 147 (258)
T 3m7n_D 101 ISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVA 147 (258)
T ss_dssp HHHHHHHHHHTTBCGGGSTTEEEEEEEEEEECCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHhCCceEEEEEEEEEEcCCCHHHHHHHHHHHH
Confidence 4456667776655 2222333 5788999999998887643
No 145
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=23.34 E-value=23 Score=22.54 Aligned_cols=27 Identities=15% Similarity=0.146 Sum_probs=22.2
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
+..=+||+++...+.+.+...++++++
T Consensus 33 i~fDlDGTL~d~~~~~~~~~~~~~~~~ 59 (250)
T 3l5k_A 33 LIFDMDGLLLDTERLYSVVFQEICNRY 59 (250)
T ss_dssp EEEETBTTTBCHHHHHHHHHHHHHHHT
T ss_pred EEEcCCCCcCCCHHHHHHHHHHHHHHh
Confidence 556789999998888888888888775
No 146
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=23.14 E-value=28 Score=21.99 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=21.1
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
..=+||+++...+.+.+.+.+.++++
T Consensus 7 iFDlDGTL~d~~~~~~~~~~~~~~~~ 32 (222)
T 2nyv_A 7 LFDLDGTLIDSAKDIALALEKTLKEL 32 (222)
T ss_dssp EECTBTTTEECHHHHHHHHHHHHHHT
T ss_pred EECCCCcCCCCHHHHHHHHHHHHHHc
Confidence 34579999999998888888888765
No 147
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=22.87 E-value=1e+02 Score=16.91 Aligned_cols=40 Identities=20% Similarity=0.163 Sum_probs=25.6
Q ss_pred CceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcc
Q psy15537 17 DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGS 60 (80)
Q Consensus 17 ~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGS 60 (80)
....++|||.-...... .-+.+.++. ++..+.+...++|.
T Consensus 48 GD~I~~ing~~v~~~~~--~~~~~~l~~--~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 48 GDVITAIDGENTSNMTH--LEAQNRIKG--CTDNLTLTVARSEH 87 (91)
T ss_dssp TCEEEEETTEECTTCCH--HHHHHHHHT--CSSEEEEEEEEECC
T ss_pred CCEEEEECCEECCCCCH--HHHHHHHHc--CCCeEEEEEEECCc
Confidence 36889999988776551 122334444 56778887777663
No 148
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=22.65 E-value=36 Score=22.52 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=25.2
Q ss_pred EEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcc
Q psy15537 20 TIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGS 60 (80)
Q Consensus 20 ~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGS 60 (80)
..=+|||+......+.+...++|++ . +..+.+.++.+=+
T Consensus 6 ~~DlDGTLl~~~~~i~~~~~~al~~-~-~~Gi~v~iaTGR~ 44 (268)
T 1nf2_A 6 VFDLDGTLLNDNLEISEKDRRNIEK-L-SRKCYVVFASGRM 44 (268)
T ss_dssp EEECCCCCSCTTSCCCHHHHHHHHH-H-TTTSEEEEECSSC
T ss_pred EEeCCCcCCCCCCccCHHHHHHHHH-H-hCCCEEEEECCCC
Confidence 3457999998776676777778877 4 3345555554433
No 149
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=22.55 E-value=99 Score=17.12 Aligned_cols=48 Identities=25% Similarity=0.363 Sum_probs=27.9
Q ss_pred ceEEeEeCcee-eeCccHHHHHHHHHHhhCCCCceEEEEeC----CcchHHHHH
Q psy15537 18 DITIAVDGSLY-KYHPRLKHWLQKYIQLLVPNKTFRLLLAE----DGSGKGAGL 66 (80)
Q Consensus 18 ~~~IavDGsvy-e~~p~f~~~l~~~l~~l~~~~~v~~~~a~----DGSg~GAAl 66 (80)
..+|-++|.++ ...+.|++.+.+.+.+- +...+.+-++. |.||+++=+
T Consensus 14 ~~vv~l~G~l~~~~~~~l~~~l~~~~~~~-~~~~vvlDls~v~~iDssgl~~L~ 66 (110)
T 1sbo_A 14 KAIVRVQGDIDAYNSSELKEQLRNFISTT-SKKKIVLDLSSVSYMDSAGLGTLV 66 (110)
T ss_dssp EEEEEEESCBSTTTTTHHHHHHHTHHHHC-SCSEEEEECTTCCCBCHHHHHHHH
T ss_pred EEEEEEeeEEccccHHHHHHHHHHHHhcC-CCcEEEEECCCCcEEccHHHHHHH
Confidence 46789999985 45566777666555332 11345555443 666665433
No 150
>3qqa_A CMER; alpha-helical, helix-turn-helix, DNA-binding, transcription regulation, transcription repressor, drug binding, transcri; HET: TCH; 2.20A {Campylobacter jejuni} PDB: 3hgy_A* 3qps_A* 2qco_A 3hgg_A*
Probab=22.40 E-value=44 Score=20.37 Aligned_cols=22 Identities=5% Similarity=0.107 Sum_probs=18.5
Q ss_pred CceeeeCccHHHHHHHHHHhhC
Q psy15537 25 GSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 25 Gsvye~~p~f~~~l~~~l~~l~ 46 (80)
|++|.|+|.=.+.+.+.+.+..
T Consensus 54 ~tlY~~F~sK~~L~~~~~~~~~ 75 (216)
T 3qqa_A 54 SNIYDGFKSKEGLFFEILDDIC 75 (216)
T ss_dssp CSSSCSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHH
Confidence 8999999998888887777655
No 151
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=22.38 E-value=32 Score=21.99 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=22.7
Q ss_pred ceEEeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 18 DITIAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
-+..=+||+++...+.+.+...+.++++
T Consensus 30 ~i~fDlDGTL~d~~~~~~~~~~~~~~~~ 57 (259)
T 4eek_A 30 AVLFDLDGVLVESEGIIAQVWQSVLAER 57 (259)
T ss_dssp EEEEESBTTTEECHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCcccCHHHHHHHHHHHHHHh
Confidence 3566789999998888888888888775
No 152
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=22.26 E-value=98 Score=17.50 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=23.2
Q ss_pred CceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCc
Q psy15537 17 DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDG 59 (80)
Q Consensus 17 ~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DG 59 (80)
....++|||.-..... -+.+.+...-|+.++.+...+||
T Consensus 21 GD~I~~InG~~v~~~~----~l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 21 GDKIISADGKNYQSAE----KLIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp SCEEEEETTBCCSSHH----HHHHHHSSCCSSCEECEEEESSS
T ss_pred CCEEEEECCEECCCHH----HHHHHHHcCCCCCEEEEEEEECC
Confidence 4688999998776432 23344443324556666666665
No 153
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=22.17 E-value=40 Score=19.24 Aligned_cols=20 Identities=20% Similarity=0.398 Sum_probs=14.7
Q ss_pred hhhhhcCCceEEeEeCceee
Q psy15537 10 LVRRIDRDDITIAVDGSLYK 29 (80)
Q Consensus 10 i~~~~~~~~~~IavDGsvye 29 (80)
|-+|...+++-|.|||.||-
T Consensus 11 v~~h~~~~~~wv~i~g~VYD 30 (82)
T 1x3x_A 11 VAKHNTQNDLWIIYDGEVHD 30 (82)
T ss_dssp HHTCEETTEEEEEETTEEEE
T ss_pred HHhhCCCCCEEEEECCEEEE
Confidence 34455555688999999996
No 154
>2nn6_E Exosome complex exonuclease RRP42; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=22.16 E-value=1.8e+02 Score=20.13 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=25.1
Q ss_pred HHHHHHHHh----------hCCCCc---e---EEEEeCCcchHHHHHHHHHHh
Q psy15537 36 HWLQKYIQL----------LVPNKT---F---RLLLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 36 ~~l~~~l~~----------l~~~~~---v---~~~~a~DGSg~GAAl~aA~a~ 72 (80)
..+.+.++. ++|+.. | ..+++.||+-.-|++.|+.+.
T Consensus 121 rli~r~lr~s~~idl~~L~i~p~~~~w~i~idv~VL~~DG~~~daai~aa~~A 173 (305)
T 2nn6_E 121 NTLYRIFNNKSSVDLKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAA 173 (305)
T ss_dssp HHHHHHHHHSCCSCSSSSCSSTTTCCCCEEEEEEECCCCSSHHHHHHHHHHHT
T ss_pred HHHHHHHhhcCcccHHHheeccCcEEEEEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 556677776 556422 2 245788999998888887754
No 155
>2nn6_B Exosome complex exonuclease RRP41; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: d.14.1.4 d.101.1.1
Probab=22.12 E-value=1.8e+02 Score=19.43 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhCC-----CCceEE---EEeCCcchHHHHHHHHHHh
Q psy15537 34 LKHWLQKYIQLLVP-----NKTFRL---LLAEDGSGKGAGLASAIAL 72 (80)
Q Consensus 34 f~~~l~~~l~~l~~-----~~~v~~---~~a~DGSg~GAAl~aA~a~ 72 (80)
....++++++..++ ...|.+ ++..||+-.-|++.|+...
T Consensus 103 ~~~ll~r~l~~~i~~~~~p~~~I~i~~~VL~~dG~~~~A~i~aa~~A 149 (249)
T 2nn6_B 103 MGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLA 149 (249)
T ss_dssp HHHHHHHHHHHTTCGGGCTTEEEEEEEEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHCCCcEEEEEEEEEeCCCCHHHHHHHHHHHH
Confidence 44556677766553 322332 5788999999998887654
No 156
>1ust_A Histone H1; DNA binding protein, linker histone, DNA binding domain, winged helix fold; NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Probab=22.08 E-value=39 Score=20.10 Aligned_cols=17 Identities=6% Similarity=0.032 Sum_probs=14.8
Q ss_pred eCccHHHHHHHHHHhhC
Q psy15537 30 YHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 30 ~~p~f~~~l~~~l~~l~ 46 (80)
.||.|.+++.++|..|-
T Consensus 6 ~hP~y~~MI~eAI~alk 22 (93)
T 1ust_A 6 SSKSYRELIIEGLTALK 22 (93)
T ss_dssp CCCCHHHHHHHHHTTTT
T ss_pred CCCCHHHHHHHHHHHcc
Confidence 48999999999998874
No 157
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=22.00 E-value=23 Score=22.10 Aligned_cols=28 Identities=4% Similarity=-0.015 Sum_probs=22.5
Q ss_pred eEEeEeCceeeeCccHHHHH-HHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWL-QKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l-~~~l~~l~ 46 (80)
+..=+||+++...+.+.+.. .++++++-
T Consensus 28 i~fDlDGTL~d~~~~~~~~~~~~~~~~~g 56 (231)
T 3kzx_A 28 VIFDWYNTLIDTSINIDRTTFYQVLDQMG 56 (231)
T ss_dssp EEECTBTTTEETTSSCCHHHHHHHHHHTT
T ss_pred EEECCCCCCcCCchhHHHHHHHHHHHHcC
Confidence 45568999999998888888 88887764
No 158
>2x36_A LON protease homolog, mitochondrial; hydrolase, catalytic DYAD, transit peptide; 2.00A {Homo sapiens}
Probab=21.56 E-value=96 Score=20.79 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=21.8
Q ss_pred CCceEEEEe-----CCcchHHHHHHHHHHhHHh
Q psy15537 48 NKTFRLLLA-----EDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 48 ~~~v~~~~a-----~DGSg~GAAl~aA~a~~~~ 75 (80)
+..|++.++ +||++.|.|++.|+.+...
T Consensus 85 ~~di~vnl~~g~~~K~GpsadLaia~AilSa~~ 117 (207)
T 2x36_A 85 TSHIHLHVPEGATPKDGPSAGCTIVTALLSLAM 117 (207)
T ss_dssp HCEEEEECCSCBCTTTGGGGHHHHHHHHHHHHH
T ss_pred cceEEEEeCCcccCCCCCcchHHHHHHHHHHcC
Confidence 466777766 4999999999998876543
No 159
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=21.56 E-value=62 Score=16.91 Aligned_cols=19 Identities=26% Similarity=0.378 Sum_probs=17.3
Q ss_pred eeeCccHHHHHHHHHHhhC
Q psy15537 28 YKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 28 ye~~p~f~~~l~~~l~~l~ 46 (80)
|+-.|.+++.|.+.+++++
T Consensus 9 ~~ip~~l~~lL~~~~~evl 27 (50)
T 2kyg_A 9 IQIPPGLTELLQGYTVEVL 27 (50)
T ss_dssp CCCCTTHHHHHHHHHHHHH
T ss_pred hcCCccHHHHHHHHHHHHH
Confidence 5678999999999999998
No 160
>3nrg_A TETR family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.56A {Chloroflexus aurantiacus}
Probab=21.38 E-value=53 Score=20.00 Aligned_cols=22 Identities=36% Similarity=0.516 Sum_probs=18.3
Q ss_pred CceeeeCccHHHHHHHHHHhhC
Q psy15537 25 GSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 25 Gsvye~~p~f~~~l~~~l~~l~ 46 (80)
|++|.|+|+=.+.+.+.+++..
T Consensus 48 ~tlY~~F~sK~~L~~~~~~~~~ 69 (217)
T 3nrg_A 48 GSFYQYFADKKDCYLYLIQLGI 69 (217)
T ss_dssp TGGGGTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 8999999998888887776654
No 161
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=21.37 E-value=55 Score=21.22 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=19.6
Q ss_pred EeEeCceeeeCccHHHHHHHHHHhh
Q psy15537 21 IAVDGSLYKYHPRLKHWLQKYIQLL 45 (80)
Q Consensus 21 IavDGsvye~~p~f~~~l~~~l~~l 45 (80)
.=+||+++...+.+.+.+.+.+++.
T Consensus 6 FDlDGTL~d~~~~~~~~~~~~~~~~ 30 (263)
T 3k1z_A 6 WDVKDTLLRLRHPLGEAYATKARAH 30 (263)
T ss_dssp ECCBTTTEEESSCHHHHHHHHHHHT
T ss_pred EcCCCceeCCCCCHHHHHHHHHHHh
Confidence 4479999998888877777777665
No 162
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=21.29 E-value=42 Score=19.60 Aligned_cols=20 Identities=30% Similarity=0.539 Sum_probs=14.6
Q ss_pred hhhhhcCCceEEeEeCceee
Q psy15537 10 LVRRIDRDDITIAVDGSLYK 29 (80)
Q Consensus 10 i~~~~~~~~~~IavDGsvye 29 (80)
+-+|...+++-|.|+|.||-
T Consensus 13 v~~h~~~~~~wv~i~g~VYD 32 (88)
T 3lf5_A 13 LKKHNKKDDCWICIRGFVYN 32 (88)
T ss_dssp HHHCEETTEEEEEETTEEEE
T ss_pred HHhhCCCCCEEEEECCEEEE
Confidence 34455556788999999995
No 163
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=21.23 E-value=40 Score=22.67 Aligned_cols=28 Identities=21% Similarity=0.389 Sum_probs=22.2
Q ss_pred eEEeEeCceeeeCccHHHH-HHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHW-LQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~-l~~~l~~l~ 46 (80)
+..=+||+++...+.+.+. ..++++++.
T Consensus 40 i~fDlDGTLld~~~~i~~~~~~~al~~l~ 68 (304)
T 3l7y_A 40 IATDMDGTFLNSKGSYDHNRFQRILKQLQ 68 (304)
T ss_dssp EEECCCCCCSCTTSCCCHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 5567899999988877776 788887774
No 164
>3col_A Putative transcription regulator; structural genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Lactobacillus plantarum WCFS1}
Probab=21.21 E-value=25 Score=21.07 Aligned_cols=22 Identities=9% Similarity=0.167 Sum_probs=18.9
Q ss_pred CceeeeCccHHHHHHHHHHhhC
Q psy15537 25 GSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 25 Gsvye~~p~f~~~l~~~l~~l~ 46 (80)
|++|.|+|.=.+.+.+.+.+..
T Consensus 45 ~t~Y~~F~sK~~L~~~~~~~~~ 66 (196)
T 3col_A 45 SNVYLYFKNKQALIDSVYARET 66 (196)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHH
Confidence 7899999998888888887765
No 165
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=21.20 E-value=1.2e+02 Score=16.96 Aligned_cols=48 Identities=21% Similarity=0.246 Sum_probs=25.3
Q ss_pred ceEEeEeCcee-eeCccHHHHHHHHHHhhCCCCceEEEEe----CCcchHHHHH
Q psy15537 18 DITIAVDGSLY-KYHPRLKHWLQKYIQLLVPNKTFRLLLA----EDGSGKGAGL 66 (80)
Q Consensus 18 ~~~IavDGsvy-e~~p~f~~~l~~~l~~l~~~~~v~~~~a----~DGSg~GAAl 66 (80)
..++-++|.++ ...+.|++.+.+.+.+- +...+.+-++ =|.||+++-+
T Consensus 13 ~~vv~l~G~l~~~~~~~l~~~l~~~~~~~-~~~~vvlDls~v~~iDssgl~~L~ 65 (116)
T 1th8_B 13 VLIVRLSGELDHHTAEELREQVTDVLENR-AIRHIVLNLGQLTFMDSSGLGVIL 65 (116)
T ss_dssp EEEEEEEEEESHHHHHHHHHHHHHHHHSS-CCCEEEEEEEEEEEECHHHHHHHH
T ss_pred EEEEEEeeeeccccHHHHHHHHHHHHhcC-CCcEEEEECCCCcEEccHHHHHHH
Confidence 46788999984 34455655555444321 1233434333 2666665443
No 166
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=21.16 E-value=1e+02 Score=16.24 Aligned_cols=48 Identities=8% Similarity=-0.051 Sum_probs=26.7
Q ss_pred EEeEeCceeee------CccHHHHHHHHHHhhC---CCCceEEEEeCCcchHHHHHHH
Q psy15537 20 TIAVDGSLYKY------HPRLKHWLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLAS 68 (80)
Q Consensus 20 ~IavDGsvye~------~p~f~~~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~a 68 (80)
+|--||.+|-. .|.=.+.+...+.++. |+..|.+. ++...-.|.-+-.
T Consensus 8 ~I~~dG~~~~~~~~~~~~~v~~~~L~~~l~~~~~~~~~~~V~I~-aD~~~~y~~vv~v 64 (74)
T 2jwk_A 8 EVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVG-GAKEVPYEEVIKA 64 (74)
T ss_dssp EECSSSCEEEEETTEEEEEECHHHHHHHHHHHHHHCTTCCEEEE-ECTTSCHHHHHHH
T ss_pred EEecCccEEEecCCCcCcccCHHHHHHHHHHHHhhCCCceEEEE-cCCCCCHHHHHHH
Confidence 34447888755 4554566777777765 45555444 4444455544433
No 167
>3ejx_A DAP epimerase, diaminopimelate epimerase, chloroplastic; PLP-independenet amino acid racemase, aziridino-diaminopimelate, isomerase; HET: ZDP; 1.95A {Arabidopsis thaliana} PDB: 3ekm_A*
Probab=21.02 E-value=3.7 Score=29.99 Aligned_cols=12 Identities=33% Similarity=0.338 Sum_probs=6.0
Q ss_pred chHHHHHHHHHH
Q psy15537 60 SGKGAGLASAIA 71 (80)
Q Consensus 60 Sg~GAAl~aA~a 71 (80)
+|-||.-+|..+
T Consensus 254 CGTGacAaavaa 265 (317)
T 3ejx_A 254 CGTGACALVVAA 265 (317)
T ss_dssp CHHHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 566654443333
No 168
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=20.92 E-value=1.5e+02 Score=17.86 Aligned_cols=40 Identities=18% Similarity=0.155 Sum_probs=26.6
Q ss_pred CceEEeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcc
Q psy15537 17 DDITIAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGS 60 (80)
Q Consensus 17 ~~~~IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGS 60 (80)
....++|||.-...... +.+.+...-++..+.+...+||.
T Consensus 77 GD~I~~inG~~v~~~~~----l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 77 YDVITKVDDKEIASSTD----LQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEETTEECCCHHH----HHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEECCEEcCCHHH----HHHHHHhCCCCCEEEEEEEECCE
Confidence 46889999987765433 34445444356678887777763
No 169
>4hku_A LMO2814 protein, TETR transcriptional regulator; structural genomics, PSI-biology; 2.30A {Listeria monocytogenes}
Probab=20.83 E-value=43 Score=20.34 Aligned_cols=36 Identities=14% Similarity=0.129 Sum_probs=23.5
Q ss_pred hhhhhhhhhhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 5 QGTAVLVRRIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 5 a~iaai~~~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+++.-|.++.|-++ |++|.|+|+=.+.+...+++.+
T Consensus 28 ~s~~~IA~~aGvs~------~tlY~~F~sKe~L~~a~~~~~~ 63 (178)
T 4hku_A 28 TTLYDIASNLNVTH------AALYKHYRNKEDLFQKLALRWL 63 (178)
T ss_dssp CCHHHHHHHTTSCG------GGGGGTCSSHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhCcCH------hHHHHHCCCHHHHHHHHHHHHH
Confidence 34444555444333 8999999998877776665544
No 170
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=20.74 E-value=1.8e+02 Score=19.71 Aligned_cols=50 Identities=18% Similarity=0.129 Sum_probs=28.6
Q ss_pred hhcCCceEEeEeCceeeeCccHHHHHHHHHHhhC-CCCceEEEEeCCcchHHH
Q psy15537 13 RIDRDDITIAVDGSLYKYHPRLKHWLQKYIQLLV-PNKTFRLLLAEDGSGKGA 64 (80)
Q Consensus 13 ~~~~~~~~IavDGsvye~~p~f~~~l~~~l~~l~-~~~~v~~~~a~DGSg~GA 64 (80)
+.....++|-+.||.... |...+.+-+.+.++. .+.++.++++ .|+-++.
T Consensus 18 ~~~~~~iViKlGGs~l~~-~~~~~~~~~~i~~l~~~G~~vVlVhG-gG~~i~~ 68 (282)
T 2bty_A 18 EFYGKTFVIKFGGSAMKQ-ENAKKAFIQDIILLKYTGIKPIIVHG-GGPAISQ 68 (282)
T ss_dssp HHTTCEEEEEECSHHHHS-HHHHHHHHHHHHHHHHTTCEEEEEEC-CSHHHHH
T ss_pred HhcCCeEEEEECchhhCC-hhHHHHHHHHHHHHHHCCCcEEEEEC-CcHHHHH
Confidence 333356899999999875 333333444444443 3456666665 5554443
No 171
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=20.72 E-value=50 Score=19.91 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=19.7
Q ss_pred hhhhhcCCceEEeEeCceee------eCccHHHHH
Q psy15537 10 LVRRIDRDDITIAVDGSLYK------YHPRLKHWL 38 (80)
Q Consensus 10 i~~~~~~~~~~IavDGsvye------~~p~f~~~l 38 (80)
|-+|...+++-|.|||.||- .||+=.+.+
T Consensus 16 v~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i 50 (104)
T 1hko_A 16 IQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVL 50 (104)
T ss_dssp HHHCBSSSSBEEEETTEEEEHHHHSSSSSSCSHHH
T ss_pred HHHhcCCCCEEEEECCEEEECCcchhhCcChHHHH
Confidence 44555556788999999994 567654443
No 172
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Probab=20.70 E-value=94 Score=21.12 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=20.0
Q ss_pred HHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHH
Q psy15537 37 WLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKL 74 (80)
Q Consensus 37 ~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~ 74 (80)
.+.+.++++. |+.+|.+. |-.+|+|++.-.+...
T Consensus 122 ~~~~~l~~~~~~~~~~~i~vt----GHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 122 DYFPVVQEQLTAHPTYKVIVT----GHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHCTTCEEEEE----EETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCeEEEe----ccChHHHHHHHHHHHH
Confidence 3444555554 44555444 7778888876655544
No 173
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=20.68 E-value=53 Score=18.40 Aligned_cols=48 Identities=15% Similarity=0.260 Sum_probs=31.3
Q ss_pred hhhhhhhhhhhcCC--ceEEeEeCceeeeCccHHHHHHHHHHhhC-CCCceEEEEeCCc
Q psy15537 4 AQGTAVLVRRIDRD--DITIAVDGSLYKYHPRLKHWLQKYIQLLV-PNKTFRLLLAEDG 59 (80)
Q Consensus 4 aa~iaai~~~~~~~--~~~IavDGsvye~~p~f~~~l~~~l~~l~-~~~~v~~~~a~DG 59 (80)
+..++.++..++.+ .+.|++||.+..+.. .=+..+ ++.+|.+...-.|
T Consensus 14 ~~Tl~~LL~~l~~~~~~vAV~vNg~iVpr~~--------~~~~~L~dGD~veIv~~VgG 64 (73)
T 2kl0_A 14 SASVAALMTELDCTGGHFAVALNYDVVPRGK--------WDETPVTAGDEIEILTPRQG 64 (73)
T ss_dssp CSBHHHHHHHTTCCSSSCEEEESSSEECHHH--------HTTCBCCTTCEEEEECCCCC
T ss_pred CCcHHHHHHHcCCCCCcEEEEECCEECChHH--------cCcccCCCCCEEEEEccccC
Confidence 45678888888753 588999999987611 101123 5577777765544
No 174
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=20.62 E-value=43 Score=19.69 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=19.0
Q ss_pred hhhhhcCCceEEeEeCceee------eCccHHHHH
Q psy15537 10 LVRRIDRDDITIAVDGSLYK------YHPRLKHWL 38 (80)
Q Consensus 10 i~~~~~~~~~~IavDGsvye------~~p~f~~~l 38 (80)
|-+|...+++-|.|+|.||- .||+=.+.+
T Consensus 12 v~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i 46 (93)
T 1cyo_A 12 IQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVL 46 (93)
T ss_dssp HTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHH
T ss_pred HHhhCCCCCEEEEECCEEEECCCcchhCcChHHHH
Confidence 34455555788999999994 466544433
No 175
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=20.50 E-value=15 Score=22.99 Aligned_cols=16 Identities=19% Similarity=0.470 Sum_probs=14.2
Q ss_pred eEEeEeCceeeeCccH
Q psy15537 19 ITIAVDGSLYKYHPRL 34 (80)
Q Consensus 19 ~~IavDGsvye~~p~f 34 (80)
..|+.|||++-..|+|
T Consensus 23 AIig~dGsvWA~s~gf 38 (130)
T 3nul_A 23 AILGQDGSVWAQSAKF 38 (130)
T ss_dssp EEEETTSCEEEECTTC
T ss_pred EEEeCCCCEEEcCCCc
Confidence 5578899999999999
No 176
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=20.43 E-value=1e+02 Score=20.83 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=21.3
Q ss_pred HHHHHHHhhC---CCCceEEEEeCCcchHHHHHHHHHHhHHh
Q psy15537 37 WLQKYIQLLV---PNKTFRLLLAEDGSGKGAGLASAIALKLG 75 (80)
Q Consensus 37 ~l~~~l~~l~---~~~~v~~~~a~DGSg~GAAl~aA~a~~~~ 75 (80)
.+.+.++++. |+.++.+. |-.+|+|++...+....
T Consensus 123 ~~~~~~~~~~~~~~~~~i~l~----GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 123 TLRQKVEDAVREHPDYRVVFT----GHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHHHHHHCTTSEEEEE----EETHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCceEEEe----cCChHHHHHHHHHHHHH
Confidence 4444455554 45555554 77888888876665544
No 177
>2qko_A Possible transcriptional regulator, TETR family P; TETR family protein, structural genomics, P protein structure initiative; 2.35A {Rhodococcus SP}
Probab=20.31 E-value=40 Score=20.90 Aligned_cols=23 Identities=13% Similarity=0.252 Sum_probs=20.8
Q ss_pred CceeeeCccHHHHHHHHHHhhCC
Q psy15537 25 GSLYKYHPRLKHWLQKYIQLLVP 47 (80)
Q Consensus 25 Gsvye~~p~f~~~l~~~l~~l~~ 47 (80)
|++|.|+|.=.+.+.+.+++.+.
T Consensus 63 ~t~Y~~F~sK~~Ll~~~~~~~~~ 85 (215)
T 2qko_A 63 GTASNYFPSRDDLFDQVGKRIHE 85 (215)
T ss_dssp TCHHHHCSCHHHHHHHHHHHGGG
T ss_pred chHHHhCCCHHHHHHHHHHHHHH
Confidence 89999999999999999988874
No 178
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=20.21 E-value=71 Score=21.26 Aligned_cols=46 Identities=11% Similarity=0.071 Sum_probs=25.3
Q ss_pred EeEeCceeeeCccHHHHHHHHHHhhCCCCceEEEEeCCcchHHHHHHHHHH
Q psy15537 21 IAVDGSLYKYHPRLKHWLQKYIQLLVPNKTFRLLLAEDGSGKGAGLASAIA 71 (80)
Q Consensus 21 IavDGsvye~~p~f~~~l~~~l~~l~~~~~v~~~~a~DGSg~GAAl~aA~a 71 (80)
|-+-|++. .+|.+++.+++.+.. .-+......+=..+|||+.|.--
T Consensus 210 vvl~GGva-~n~~lr~~l~~~~g~----~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 210 VVMVGGVA-RNSGIVRAMAREINT----EIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp EEEESGGG-GCHHHHHHHHHHHTS----CEECCSSGGGHHHHHHHHHHHHH
T ss_pred EEEecCcc-chHHHHHHHHHHHCC----CeeeCCCcchHHHHHHHHHHHHH
Confidence 45557764 468888888776521 11111122333457888877543
No 179
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=20.18 E-value=27 Score=22.70 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=21.9
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||++....+...+...++++++-
T Consensus 6 i~~DlDGTLl~~~~~i~~~~~~al~~l~ 33 (258)
T 2pq0_A 6 VFFDIDGTLLDEQKQLPLSTIEAVRRLK 33 (258)
T ss_dssp EEECTBTTTBCTTSCCCHHHHHHHHHHH
T ss_pred EEEeCCCCCcCCCCccCHHHHHHHHHHH
Confidence 3345899999888888888888888774
No 180
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=20.16 E-value=44 Score=21.80 Aligned_cols=28 Identities=25% Similarity=0.430 Sum_probs=21.7
Q ss_pred eEEeEeCceeeeCccHHHHHHHHHHhhC
Q psy15537 19 ITIAVDGSLYKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 19 ~~IavDGsvye~~p~f~~~l~~~l~~l~ 46 (80)
+..=+||+++...+.+.+.+.+++.+.+
T Consensus 60 i~FDlDGTL~d~~~~~~~~~~~~~~~~~ 87 (282)
T 3nuq_A 60 FFFDIDNCLYKSSTRIHDLMQQSILRFF 87 (282)
T ss_dssp EEECCTTTTSCCCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCcccCCccHHHHHHHHHHHHH
Confidence 4456899999998887777777777753
No 181
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=20.15 E-value=47 Score=19.13 Aligned_cols=20 Identities=10% Similarity=0.315 Sum_probs=14.6
Q ss_pred hhhhhcCCceEEeEeCceee
Q psy15537 10 LVRRIDRDDITIAVDGSLYK 29 (80)
Q Consensus 10 i~~~~~~~~~~IavDGsvye 29 (80)
|-+|...+++-|.|+|.||-
T Consensus 14 v~~h~~~~~~wv~i~g~VYD 33 (88)
T 2ibj_A 14 VAKNNTKDKNWFIIHNNVYD 33 (88)
T ss_dssp HHTSEETTEEEEEETTEEEE
T ss_pred HHHhCCCCCEEEEECCEEEE
Confidence 34454555788999999996
No 182
>3bpj_A Eukaryotic translation initiation factor 3 subuni; EIF3S1, structural genomics, limited proteolysis, phosphoprotein, protein biosynthesis; 1.85A {Homo sapiens}
Probab=20.13 E-value=48 Score=19.22 Aligned_cols=19 Identities=11% Similarity=0.212 Sum_probs=17.6
Q ss_pred eeeCccHHHHHHHHHHhhC
Q psy15537 28 YKYHPRLKHWLQKYIQLLV 46 (80)
Q Consensus 28 ye~~p~f~~~l~~~l~~l~ 46 (80)
|++.|.|...+++-+++++
T Consensus 30 ~~ks~~y~~f~~~lir~l~ 48 (80)
T 3bpj_A 30 YEKSLYYASFLEVLVRDVC 48 (80)
T ss_dssp GTTSTTHHHHHHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHHHH
Confidence 7889999999999999988
No 183
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=20.05 E-value=77 Score=24.31 Aligned_cols=18 Identities=17% Similarity=-0.016 Sum_probs=15.2
Q ss_pred ceEEeEeCceeeeCccHH
Q psy15537 18 DITIAVDGSLYKYHPRLK 35 (80)
Q Consensus 18 ~~~IavDGsvye~~p~f~ 35 (80)
-++|+.||-.|+|+|..-
T Consensus 343 lv~~~~DgE~fgh~~~eG 360 (528)
T 2b5d_X 343 VIVAPFDAELFGHWWFEG 360 (528)
T ss_dssp EEEEEEEGGGBTTTBTTH
T ss_pred EEEEEeChHhcCCCcCcH
Confidence 488999999999998643
Done!